Citrus Sinensis ID: 006772

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630--
Protein Sequence
MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVSLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKGQGNSKRGGNNCQDGQAAGGNGAWLRSPVANIIFREGVPATAAAR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEcEEEEccccEEEEEEEcccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccEEEccccccEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHcccccEEEEEcccccccccccccccccccccccEEEEEcccEEEEEccccccccccccccccccccEEEEEEccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHccccccccccccccccccccccccccccccccccHHHcEHHHHHcccccHHEEEEEEccccHHHHHHHHHHHHHHcHHccccccEEcHHHHHHHHHHcccccEEEEEEEEccccEEEEEEEEcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEcccccHHHHHHHccccccEEcccccHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHccccccccccHHHHHccccHccccHHHHHHcccccccccccccccccccccccccccccccHHHccccccccccccccHccccHHcccccccccccccccccEEEcccccEEEccHHcccccccccccccccccEEEEccccccccEcccEEEEEEcccccccHHHHHHHHHccEEEEEccccccccccccccccccEccccEEEEccccEEEEEccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcccccccccccccEcccccccccccccccccccccccHHHHHHHcccccHHHHcc
Coil and Loop (DISEMBL)
maeqirahkpaasfeyelfegdpdhlrtvvatptqtrpwidptslklkhrigrgpfgdvwlathhqsaddfDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFyegsvgdriaqqrggklplpdiLRYGIQLAKGISDLHSIGLLVLnlkpsnlllsehdqlvlgdfgipylllgrslsdsdmalrlgtpnymapeqwepevrgpisfetdtwgfgCSIMEMLTgiqpwfgkSVEEIYHSVVIkkekpcipsglppavenVIIGCFEYDLRNRPLMADILHAFESsqnavyndgewtglgsraltdtssvkgytawyplkdhlqvgdtvrsrkplnarkpqtvdvpagtvvgldadtdrnssvlvkipglhnplrvqesSLERVTFGlaagdwvslkdensrhssvGVLHSvqrdgsvsvgFIGLETLWRGNYSEIQMAKAYYVGQFVrvganvftprfewprkrggewatgkilqvlpngclvvgfpgrfplghgsgssladpsevelvsfdtcpgvvekyKHIEDYHWSVRPLAIALGLFAAMKLGWLVgrsvggrlkkgqgnskrggnncqdgqaaggngawlrspvaniifregvpataaar
Flexible Loop (DISEMBL)
maeqirahkpaasfEYELFEGDPDHLRTVvatptqtrpwidptslKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEkpcipsglppaVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRsrkplnarkpqtvdvpagtvvgldadtdrnssvlvkipglhnplrvqeSSLERVTFGLAAGDWVSLKDENSRHSSVGVlhsvqrdgsvsVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGgrlkkgqgnskrggnncQDGQAAGGNGAWLRSPVANIIFREGVPATAAAR
Low Complexity Region (SEG)
MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGllvlnlkpsnlllsEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVSLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKGQGNSKRGGNNCQDGQAAGGNGAWLRSPVANIIFREGVPATAAAR
Disordered region (IsUnstruct)
**************EYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDT****************VPAGTVVGLDADT**NSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVSLK*******SVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHG*********EVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGG************************NGAWLRSPVANIIFREG********
Disordered Region (DISOPRED)
**************************************WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML***************EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS*****************************************************************************************************LAA*DW*****************SVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGR*******************************WLRSPVANIIFR**********
Disordered Region (DISEMBL)
********KPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVSLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLK*********GNNCQDGQAAGGNGAWLRSPVANIIFREGVPATAAAR
Disordered Region (DISPRO)
*************************************PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVS*****SRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRS******************************WLRSPVANIIFREGVP******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVSLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKGQGNSKRGGNNCQDGQAAGGNGAWLRSPVANIIFREGVPATAAAR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	632	2.2.26 [Sep-21-2011]
Q9FY48	1625	E3 ubiquitin-protein liga	no	no	0.417	0.162	0.309	4e-30
Q54XJ4	1495	Probable serine/threonine	yes	no	0.280	0.118	0.327	5e-18
P08103	524	Tyrosine-protein kinase H	yes	no	0.428	0.517	0.252	5e-17
P08631	526	Tyrosine-protein kinase H	yes	no	0.411	0.494	0.261	9e-17
O14299	1401	MAP kinase kinase kinase	yes	no	0.384	0.173	0.286	2e-16
Q95M30	504	Tyrosine-protein kinase H	N/A	no	0.411	0.515	0.261	2e-16
Q6P6U0	517	Tyrosine-protein kinase F	yes	no	0.417	0.510	0.277	2e-16
P50545	524	Tyrosine-protein kinase H	no	no	0.428	0.517	0.249	2e-16
Q9GM70	397	Serine/threonine-protein	no	no	0.367	0.584	0.28	3e-16
P14234	517	Tyrosine-protein kinase F	no	no	0.417	0.510	0.270	5e-16

>sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2

 Score =  133 bits (335), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 27/291 (9%)

Query: 45  LKLKHRIGR----GPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
           +KL  +IG     G FG V +     +       H +AVK +   ++   +    + E L
Sbjct: 137 MKLVRQIGEESSSGGFGGVEMWDATVAGGGGRCKHRVAVKKMTLTEDMDVEWMQGQLESL 196

Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
                  ++VC  HG+  ++G +C+ M    GSV   + Q+  G+L L  ILRYG  +A+
Sbjct: 197 RRASMWCRNVCTFHGVVKMDGSLCLLMDRCFGSVQSEM-QRNEGRLTLEQILRYGADVAR 255

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI------PYLLLGRSLSDSDMALRLG 214
           G+++LH+ G++ +N+KPSNLLL      V+ D+G+      P     R   DS       
Sbjct: 256 GVAELHAAGVICMNIKPSNLLLDASGNAVVSDYGLAPILKKPTCQKTRPEFDSSKVTLYT 315

Query: 215 -----TPNYMAPEQWEP------EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
                +P+Y APE W P      E    +S E+D W FGC+++EM TG  PW G S EEI
Sbjct: 316 DCVTLSPHYTAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMCTGSTPWDGLSREEI 375

Query: 264 YHSVVIKKEKP-----CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
           + +VV  ++ P      +  G+P  +  +I  C ++    RP    +L  F
Sbjct: 376 FQAVVKARKVPPQYERIVGVGIPRELWKMIGECLQFKPSKRPTFNAMLATF 426

Mediates E2-dependent protein ubiquitination. Acts as a negative regulator of abscisic acid signaling. Required for ABI5 degradation.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q54XJ4|Y8901_DICDI Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 6/183 (3%)

Query: 125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE 184
           I M+F E    ++I + R G LP   +  Y  Q+  G+  LH  G++  ++K +NLL+S 
Sbjct: 99  IVMEFIENGSLEKIIK-RHGLLPESLVTVYIAQVLNGLEYLHRQGVIHRDIKAANLLIST 157

Query: 185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS 244
              + L DFG+   +   S  + D     GTP +MAPE  +  ++G IS   D W  GC+
Sbjct: 158 DGSIKLADFGVATKVSDLSSDNPDDTFA-GTPYWMAPEVIQ--MQG-ISTACDVWSLGCT 213

Query: 245 IMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
           I+E+LTG  P+FG +     + +V +++ P IP G+  A+++ ++ CF+ D   R     
Sbjct: 214 IIELLTGTPPYFGLAPAAALYKIV-QEDHPPIPPGISAALKDFLLNCFKKDENIRSSAKQ 272

Query: 305 ILH 307
           +LH
Sbjct: 273 LLH 275

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P08103|HCK_MOUSE Tyrosine-protein kinase HCK OS=Mus musculus GN=Hck PE=1 SV=4

 Score = 90.1 bits (222), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 38/309 (12%)

Query: 26  LRTVVATPTQTRPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
           L     +P   +PW      I   SL+++ ++G G FG+VW+AT       ++++ ++AV
Sbjct: 235 LSVPCVSPKPQKPWEKDAWEIPRESLQMEKKLGAGQFGEVWMAT-------YNKHTKVAV 287

Query: 80  KMLLPLKEDCAKVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGD 136
           K + P       + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D
Sbjct: 288 KTMKP-----GSMSVEAFLAEANLMKSLQHDKLVKLHAV-VSQEPIFIVTEFMAKGSLLD 341

Query: 137 RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP 196
            +  + G K PLP ++ +  Q+++G++ +     +  +L+ +N+L+S      + DFG  
Sbjct: 342 FLKSEEGSKQPLPKLIDFSAQISEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-- 399

Query: 197 YLLLGRSLSDSDMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GI 252
              L R + D++   R G      + APE       G  + ++D W FG  +ME++T G 
Sbjct: 400 ---LARIIEDNEYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGR 453

Query: 253 QPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAF 309
            P+ G S  E+  ++      P  P   P  + N++I C++     RP    +  +L  F
Sbjct: 454 IPYPGMSNPEVIRALEHGYRMP-RPDNCPEELYNIMIRCWKNRPEERPTFEYIQSVLDDF 512

Query: 310 ESSQNAVYN 318
            ++  + Y 
Sbjct: 513 YTATESQYQ 521

Non-receptor tyrosine-protein kinase found in hematopoietic cells that transmits signals from cell surface receptors and plays an important role in the regulation of innate immune responses, including neutrophil, monocyte, macrophage and mast cell functions, phagocytosis, cell survival and proliferation, cell adhesion and migration. Acts downstream of receptors that bind the Fc region of immunoglobulins, such as FCGR1A and FCGR2A, but also CSF3R, PLAUR, the receptors for IFNG, IL2, IL6 and IL8, and integrins, such as ITGB1 and ITGB2. During the phagocytic process, mediates mobilization of secretory lysosomes, degranulation, and activation of NADPH oxidase to bring about the respiratory burst. Plays a role in the release of inflammatory molecules. Promotes reorganization of the actin cytoskeleton and actin polymerization, formation of podosomes and cell protrusions. Inhibits TP73-mediated transcription activation and TP73-mediated apoptosis. Phosphorylates CBL in response to activation of immunoglobulin gamma Fc region receptors. Phosphorylates ADAM15, BCR, ELMO1, FCGR2A, GAB1, GAB2, RAPGEF1, STAT5B, TP73, VAV1 and WAS.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P08631|HCK_HUMAN Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK PE=1 SV=5

 Score = 89.4 bits (220), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 139/298 (46%), Gaps = 38/298 (12%)

Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P      
Sbjct: 248 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 295

Query: 91  KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
            + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D +    G K P
Sbjct: 296 SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 354

Query: 148 LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS 207
           LP ++ +  Q+A+G++ +     +  +L+ +N+L+S      + DFG     L R + D+
Sbjct: 355 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDN 409

Query: 208 DMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           +   R G      + APE       G  + ++D W FG  +ME++T G  P+ G S  E+
Sbjct: 410 EYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 466

Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
             ++      P  P   P  + N+++ C++     RP    +  +L  F ++  + Y 
Sbjct: 467 IRALERGYRMP-RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYQ 523

Non-receptor tyrosine-protein kinase found in hematopoietic cells that transmits signals from cell surface receptors and plays an important role in the regulation of innate immune responses, including neutrophil, monocyte, macrophage and mast cell functions, phagocytosis, cell survival and proliferation, cell adhesion and migration. Acts downstream of receptors that bind the Fc region of immunoglobulins, such as FCGR1A and FCGR2A, but also CSF3R, PLAUR, the receptors for IFNG, IL2, IL6 and IL8, and integrins, such as ITGB1 and ITGB2. During the phagocytic process, mediates mobilization of secretory lysosomes, degranulation, and activation of NADPH oxidase to bring about the respiratory burst. Plays a role in the release of inflammatory molecules. Promotes reorganization of the actin cytoskeleton and actin polymerization, formation of podosomes and cell protrusions. Inhibits TP73-mediated transcription activation and TP73-mediated apoptosis. Phosphorylates CBL in response to activation of immunoglobulin gamma Fc region receptors. Phosphorylates ADAM15, BCR, ELMO1, FCGR2A, GAB1, GAB2, RAPGEF1, STAT5B, TP73, VAV1 and WAS.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|O14299|WIS4_SCHPO MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wis4 PE=3 SV=1

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 33/276 (11%)

Query: 49   HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            H +  G FGDV+   + ++ D       LAVK    +K   ++ F +  +++  +    +
Sbjct: 1041 HFVRSGMFGDVYTGVNMETGD------LLAVK---EIKLQDSRTFRSTVDQIHNEMTVLE 1091

Query: 109  -----SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILR-YGIQLAKG 161
                 +V   +G+ V   K+ I M+F +G S+ D +A    G++   ++L+ Y +QL +G
Sbjct: 1092 RLNHPNVVTYYGVEVHREKVYIFMEFCQGGSLADLLAH---GRIEDENVLKVYVVQLLEG 1148

Query: 162  ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL---LGRSLSDSDMALRL----G 214
            ++ +HS  +L  ++KP+N+LL     +   DFG    +       +   D+   L    G
Sbjct: 1149 LAYIHSQHILHRDIKPANILLDHRGMIKYSDFGSALYVSPPTDPEVRYEDIQPELQHLAG 1208

Query: 215  TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE--EIYHSVVIKKE 272
            TP YMAPE      +G      D W  GC I+EM+TG  PW     E   +YH  V    
Sbjct: 1209 TPMYMAPEIILGTKKGDFG-AMDIWSLGCVILEMMTGSTPWSEMDNEWAIMYH--VAAMH 1265

Query: 273  KPCIPSG--LPPAVENVIIGCFEYDLRNRPLMADIL 306
             P IP    +     + I  CFE D   RP   D+L
Sbjct: 1266 TPSIPQNEKISSLARDFIEQCFERDPEQRPRAVDLL 1301

Involved in a signal transduction pathway that is activated in under conditions of heat shock, oxidative stress or limited nutrition. Unlike win1, it is not activated by changes in the osmolarity of the extracellular environment. Activates the wis1 MAP kinase kinase by phosphorylation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q95M30|HCK_MACFA Tyrosine-protein kinase HCK OS=Macaca fascicularis GN=HCK PE=2 SV=3

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 139/298 (46%), Gaps = 38/298 (12%)

Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P      
Sbjct: 226 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 273

Query: 91  KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
            + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D +    G K P
Sbjct: 274 SMSVEAFLAEANLMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 332

Query: 148 LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS 207
           LP ++ +  Q+A+G++ +     +  +L+ +N+L+S      + DFG     L R + D+
Sbjct: 333 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARIIEDN 387

Query: 208 DMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           +   R G      + APE       G  + ++D W FG  +ME++T G  P+ G S  E+
Sbjct: 388 EYTAREGAKFPIKWTAPEAIN---FGSSTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 444

Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
             ++      P  P   P  + N+++ C++     RP    +  +L  F ++  + Y 
Sbjct: 445 IRALERGYRMP-RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYQ 501

Non-receptor tyrosine-protein kinase found in hematopoietic cells that transmits signals from cell surface receptors and plays an important role in the regulation of innate immune responses, including neutrophil, monocyte, macrophage and mast cell functions, phagocytosis, cell survival and proliferation, cell adhesion and migration. Acts downstream of receptors that bind the Fc region of immunoglobulins, such as FCGR1A and FCGR2A, but also CSF3R, PLAUR, the receptors for IFNG, IL2, IL6 and IL8, and integrins, such as ITGB1 and ITGB2. During the phagocytic process, mediates mobilization of secretory lysosomes, degranulation, and activation of NADPH oxidase to bring about the respiratory burst. Plays a role in the release of inflammatory molecules. Promotes reorganization of the actin cytoskeleton and actin polymerization, formation of podosomes and cell protrusions. Inhibits TP73-mediated transcription activation and TP73-mediated apoptosis. Phosphorylates CBL in response to activation of immunoglobulin gamma Fc region receptors. Phosphorylates ADAM15, BCR, ELMO1, FCGR2A, GAB1, GAB2, RAPGEF1, STAT5B, TP73, VAV1 and WAS.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q6P6U0|FGR_RAT Tyrosine-protein kinase Fgr OS=Rattus norvegicus GN=Fgr PE=1 SV=1

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 28/292 (9%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ID  S+ L  R+G G FGDVWL T + S        ++AVK L P      K F+   E 
Sbjct: 246 IDRNSIALDRRLGTGCFGDVWLGTWNCST-------KVAVKTLKP-GTMSPKAFLE--EA 295

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQL 158
              K      +  L+ + V    I I  +F   GS+ D +  ++G  L LP+++    Q+
Sbjct: 296 QIMKLLRHDKLVQLYAV-VSEEPIYIVTEFMCYGSLLDFLKDRKGHNLMLPNLVDMAAQV 354

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           A+G++ +  +  +  +L+ +N+L+ EH    + DFG     L R + D +   + GT   
Sbjct: 355 AEGMAYMERMNYIHRDLRAANILVGEHLICKIADFG-----LARLIVDDEYNPQQGTK-- 407

Query: 219 MAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
             P +W   E  + G  + ++D W FG  + E++T G  P+ G +  E+   V      P
Sbjct: 408 -FPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMP 466

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGEWT 323
           C P G P ++  V+   +  D   RP    +   L  + +S    Y  G+ T
Sbjct: 467 C-PPGCPVSLYEVMEQTWRLDPEERPTFEYLQSFLEDYFTSTEPQYQPGDQT 517

Non-receptor tyrosine-protein kinase that transmits signals from cell surface receptors devoid of kinase activity and contributes to the regulation of immune responses, including neutrophil, monocyte, macrophage and mast cell functions, cytoskeleton remodeling in response to extracellular stimuli, phagocytosis, cell adhesion and migration. Promotes mast cell degranulation, release of inflammatory cytokines and IgE-mediated anaphylaxis. Acts downstream of receptors that bind the Fc region of immunoglobulins, such as MS4A2/FCER1B, FCER1G and FCGR2. Acts downstream of ITGB1 and ITGB2, and regulates actin cytoskeleton reorganization, cell spreading and adhesion. Depending on the context, activates or inhibits cellular responses. Functions as negative regulator of ITGB2 signaling, phagocytosis and SYK activity in monocytes. Required for normal ITGB1 and ITGB2 signaling, normal cell spreading and adhesion in neutrophils and macrophages. Functions as positive regulator of cell migration and regulates cytoskeleton reorganization via RAC1 activation. Phosphorylates SYK (in vitro) and promotes SYK-dependent activation of AKT1 and MAP kinase signaling. Phosphorylates PLD2 in antigen-stimulated mast cells, leading to PLD2 activation and the production of the signaling molecules lysophosphatidic acid and diacylglycerol. Promotes activation of PIK3R1. Phosphorylates FASLG, and thereby regulates its ubiquitination and subsequent internalization. Phosphorylates ABL1. Promotes phosphorylation of CBL, CTTN, PIK3R1, PTK2/FAK1, PTK2B/PYK2 and VAV2 (By similarity). Phosphorylates HCLS1 that has already been phosphorylated by SYK, but not unphosphorylated HCLS1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P50545|HCK_RAT Tyrosine-protein kinase HCK OS=Rattus norvegicus GN=Hck PE=1 SV=4

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 143/309 (46%), Gaps = 38/309 (12%)

Query: 26  LRTVVATPTQTRPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
           L     +P   +PW      I   SL+++ ++G G FG+VW+AT       ++++ ++AV
Sbjct: 235 LSVPCVSPKPQKPWEKDAWEIPRESLQMEKKLGAGQFGEVWMAT-------YNKHTKVAV 287

Query: 80  KMLLPLKEDCAKVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGD 136
           K + P       + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D
Sbjct: 288 KTMKP-----GSMSVEAFLAEANLMKTLQHDKLVKLHAV-VSQEPIFIVTEFMAKGSLLD 341

Query: 137 RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP 196
            +  + G K PLP ++ +  Q+++G++ +     +  +L+ +N+L+S      + DFG  
Sbjct: 342 FLKSEEGSKQPLPKLIDFSAQISEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-- 399

Query: 197 YLLLGRSLSDSDMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GI 252
              L R + D++   R G      + APE       G  + ++D W FG  +ME++T G 
Sbjct: 400 ---LARIIEDNEYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGR 453

Query: 253 QPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAF 309
            P+ G S  E+  ++      P  P   P  + +++I C++     RP    +  +L  F
Sbjct: 454 IPYPGMSNPEVIRALEHGYRMP-RPDNCPEELYSIMIRCWKNRPEERPTFEYIQSVLDDF 512

Query: 310 ESSQNAVYN 318
            ++  + Y 
Sbjct: 513 YTATESQYQ 521

Non-receptor tyrosine-protein kinase found in hematopoietic cells that transmits signals from cell surface receptors and plays an important role in the regulation of innate immune responses, including neutrophil, monocyte, macrophage and mast cell functions, phagocytosis, cell survival and proliferation, cell adhesion and migration. Acts downstream of receptors that bind the Fc region of immunoglobulins, such as FCGR1A and FCGR2A, but also CSF3R, PLAUR, the receptors for IFNG, IL2, IL6 and IL8, and integrins, such as ITGB1 and ITGB2. During the phagocytic process, mediates mobilization of secretory lysosomes, degranulation, and activation of NADPH oxidase to bring about the respiratory burst. Plays a role in the release of inflammatory molecules. Promotes reorganization of the actin cytoskeleton and actin polymerization, formation of podosomes and cell protrusions. Inhibits TP73-mediated transcription activation and TP73-mediated apoptosis. Phosphorylates CBL in response to activation of immunoglobulin gamma Fc region receptors. Phosphorylates ADAM15, BCR, ELMO1, FCGR2A, GAB1, GAB2, RAPGEF1, STAT5B, TP73, VAV1 and WAS.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q9GM70|ST17A_RABIT Serine/threonine-protein kinase 17A OS=Oryctolagus cuniculus GN=STK17A PE=2 SV=1

 Score = 87.4 bits (215), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)

Query: 23  PDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML 82
           P  L T + T  +T P+ D  SL     +GRG F  V       S  +F      A K +
Sbjct: 22  PGGLLTEIRTAIRTEPFQDCYSLSPGRELGRGKFAVVRKCIQKDSGKEF------AAKFM 75

Query: 83  LPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIA 139
              +  +DC    +++   +    +++  V  LH +   + ++ + +++  G  + D+  
Sbjct: 76  RKRRKGQDCRMEIIHEIA-VLELAQDNPWVINLHEVYETSSEMILVLEYAAGGEISDQCV 134

Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL 199
             R       D+ R   Q+ +G+  LH+  ++ L+LKP N+LL+    L  GD  I    
Sbjct: 135 ADRDEAFNEKDVQRLMRQILEGVHFLHTHDVVHLDLKPQNILLTSESPL--GDIKIVDFG 192

Query: 200 LGRSLSDSDMALR--LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG 257
           L R + +S+  LR  +GTP Y+APE    +   PIS  TD W  G     MLTGI P+ G
Sbjct: 193 LSRIVKNSE-ELREIMGTPEYVAPEILSYD---PISMATDMWSIGVLTYVMLTGISPFLG 248

Query: 258 KSVEEIYHSV 267
            + +E + ++
Sbjct: 249 DNKQETFLNI 258

Acts as a positive regulator of apoptosis. May also act as a regulator of cellular reactive oxygen species.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P14234|FGR_MOUSE Tyrosine-protein kinase Fgr OS=Mus musculus GN=Fgr PE=1 SV=2

 Score = 86.7 bits (213), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 28/292 (9%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ID  S+ L+ R+G G FGDVWL T + S        ++AVK L P      K F+ + + 
Sbjct: 246 IDRNSIALERRLGTGCFGDVWLGTWNCST-------KVAVKTLKP-GTMSPKAFLEEAQI 297

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQL 158
           +  K      +  L+ + V    I I  +F   GS+ D +  + G  L LP ++    Q+
Sbjct: 298 M--KLLRHDKLVQLYAV-VSEEPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQV 354

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           A+G++ +  +  +  +L+ +N+L+ E+    + DFG     L R + D++   + GT   
Sbjct: 355 AEGMAYMERMNYIHRDLRAANILVGEYLICKIADFG-----LARLIEDNEYNPQQGTK-- 407

Query: 219 MAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
             P +W   E  + G  + ++D W FG  + E++T G  P+ G +  E+   V      P
Sbjct: 408 -FPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMP 466

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGEWT 323
           C P G P ++  V+   +  D   RP    +   L  + +S    Y  G+ T
Sbjct: 467 C-PPGCPASLYEVMEQAWRLDPEERPTFEYLQSFLEDYFTSTEPQYQPGDQT 517

Non-receptor tyrosine-protein kinase that transmits signals from cell surface receptors devoid of kinase activity and contributes to the regulation of immune responses, including neutrophil, monocyte, macrophage and mast cell functions, cytoskeleton remodeling in response to extracellular stimuli, phagocytosis, cell adhesion and migration. Promotes mast cell degranulation, release of inflammatory cytokines and IgE-mediated anaphylaxis. Acts downstream of receptors that bind the Fc region of immunoglobulins, such as MS4A2/FCER1B, FCER1G and FCGR2. Acts downstream of ITGB1 and ITGB2, and regulates actin cytoskeleton reorganization, cell spreading and adhesion. Depending on the context, activates or inhibits cellular responses. Functions as negative regulator of ITGB2 signaling, phagocytosis and SYK activity in monocytes (PubMed:11672534). Required for normal ITGB1 and ITGB2 signaling, normal cell spreading and adhesion in neutrophils and macrophages (PubMed:8666673 and PubMed:9687507). Functions as positive regulator of cell migration and regulates cytoskeleton reorganization via RAC1 activation (PubMed:15561106). Phosphorylates SYK (in vitro) and promotes SYK-dependent activation of AKT1 and MAP kinase signaling (PubMed:21746961). Phosphorylates PLD2 in antigen-stimulated mast cells, leading to PLD2 activation and the production of the signaling molecules lysophosphatidic acid and diacylglycerol. Promotes activation of PIK3R1. Phosphorylates FASLG, and thereby regulates its ubiquitination and subsequent internalization. Phosphorylates ABL1. Promotes phosphorylation of CBL, CTTN, PIK3R1, PTK2/FAK1, PTK2B/PYK2 and VAV2. Phosphorylates HCLS1 that has already been phosphorylated by SYK, but not unphosphorylated HCLS1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	632
255553227	658	protein kinase, putative [Ricinus commun	0.988	0.949	0.730	0.0
225442924	630	PREDICTED: uncharacterized protein LOC10	0.996	1.0	0.718	0.0
297743474	946	unnamed protein product [Vitis vinifera]	0.919	0.614	0.734	0.0
296082051	750	unnamed protein product [Vitis vinifera]	0.974	0.821	0.654	0.0
225430314	638	PREDICTED: uncharacterized protein LOC10	0.974	0.965	0.654	0.0
255548886	632	protein kinase, putative [Ricinus commun	0.992	0.992	0.631	0.0
224089274	583	predicted protein [Populus trichocarpa]	0.919	0.996	0.664	0.0
224141907	562	predicted protein [Populus trichocarpa]	0.887	0.998	0.656	0.0
449437150	626	PREDICTED: uncharacterized protein LOC10	0.988	0.998	0.573	0.0
357123184	631	PREDICTED: E3 ubiquitin-protein ligase K	0.984	0.985	0.574	0.0

>gi|255553227|ref|XP_002517656.1| protein kinase, putative [Ricinus communis] gi|223543288|gb|EEF44820.1| protein kinase, putative [Ricinus communis]

 Score =  946 bits (2444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/630 (73%), Positives = 527/630 (83%), Gaps = 5/630 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MAE+IR  +PA SFEY LFEGDPDHLRTVVATPTQ  PWI+P  LKLKHRIGRG FGDVW
Sbjct: 33  MAEKIRVPEPATSFEYMLFEGDPDHLRTVVATPTQISPWIEPAELKLKHRIGRGIFGDVW 92

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LATHHQS+DDFDEYHE+AVKML PLKED  ++FV+KFE+LF K RE   V WLHGIS++N
Sbjct: 93  LATHHQSSDDFDEYHEVAVKMLHPLKEDLTQIFVDKFEKLFLKCREILGVGWLHGISIMN 152

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           G+ICIAMKFY+GS+ DRIA  +GGKL L DILRYGI LAKGI +LHSIGLLVLNLKPSN 
Sbjct: 153 GQICIAMKFYKGSIADRIALVKGGKLQLSDILRYGIDLAKGIQELHSIGLLVLNLKPSNF 212

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           L++EHD  VLGDFGI +LL G  L +S+MALRLGTPNYMAPEQWEPEVRGPISFETD+WG
Sbjct: 213 LINEHDHAVLGDFGISFLLHGIPLLNSEMALRLGTPNYMAPEQWEPEVRGPISFETDSWG 272

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FGCSI+EMLTG+QP+FGKS+EEIY SVVIK+E P IP+GLPPAVENV+ GCF+YDLRNRP
Sbjct: 273 FGCSIVEMLTGVQPFFGKSIEEIYQSVVIKQETPQIPNGLPPAVENVLGGCFQYDLRNRP 332

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM D+LHAF SSQNAV +   W GL SRAL+  SS   YTAWY  +D+LQ+GDTVRSRKP
Sbjct: 333 LMEDVLHAFHSSQNAVNSGEGWVGLESRALSGKSS-GSYTAWYLSRDNLQLGDTVRSRKP 391

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
           LNA KPQT+DVP GT+VG D++ DRN  VLVK+ GLHNPLRVQES+LERVTFG A GDWV
Sbjct: 392 LNACKPQTMDVPKGTLVGPDSNDDRNGFVLVKVAGLHNPLRVQESTLERVTFGFAEGDWV 451

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            LK+E S HS VG+LHSVQRDG V+VGF+GLETLW G YS++QMAKAYYVGQFVR+ AN+
Sbjct: 452 YLKEETSMHSPVGILHSVQRDGGVAVGFVGLETLWMGTYSDLQMAKAYYVGQFVRLKANL 511

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
            T RF+WPRKRGG WATG+I QVL NGCL+V FPGR   G  S + LADP+EVE+VSFDT
Sbjct: 512 VTARFKWPRKRGGGWATGRISQVLSNGCLIVSFPGRLVFGDESNTFLADPAEVEVVSFDT 571

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKGQGNSKRGGNNCQ 600
           CPGV+EKY+H+ED+HWSVRPLAIALGLF AMKL   VGRS+  +L+KG+   K G  + Q
Sbjct: 572 CPGVMEKYQHVEDFHWSVRPLAIALGLFTAMKLTLSVGRSISTKLRKGR---KSGEGHSQ 628

Query: 601 DGQAAGGNGAWLRSPVANIIFREGVPATAA 630
           DGQ  GGN AWL  PVANI+F+EGVPA   
Sbjct: 629 DGQ-GGGNAAWLPPPVANILFKEGVPAATV 657

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442924|ref|XP_002265172.1| PREDICTED: uncharacterized protein LOC100268161 isoform 1 [Vitis vinifera] gi|359482371|ref|XP_003632763.1| PREDICTED: uncharacterized protein LOC100268161 isoform 2 [Vitis vinifera]

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/632 (71%), Positives = 515/632 (81%), Gaps = 2/632 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MAE+I A  P ASFEYELFEGDPDHLRTV AT TQ  PWIDP SLKLKHRIGRG FGDVW
Sbjct: 1   MAEKIGAAPPPASFEYELFEGDPDHLRTVAATSTQLSPWIDPASLKLKHRIGRGLFGDVW 60

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LATHHQSADD+DEYHE+AVKML  ++ED  ++F++KF  +F K R+ + VCWLHGIS+  
Sbjct: 61  LATHHQSADDYDEYHEVAVKMLHTIREDHMQMFLDKFAGIFLKCRQLKGVCWLHGISIKT 120

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GK+CIAMKFYEGSVGDR+A  +GGKLPL D+LRYGI+LAKGI +LHS G+LVLNLKPSN 
Sbjct: 121 GKVCIAMKFYEGSVGDRMAHLKGGKLPLSDVLRYGIELAKGIMELHSTGVLVLNLKPSNF 180

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL+EHDQ+VLGD GIPYLLLG  L + DM LRLGTPNYMAPEQWEPEVRGPIS ETDTWG
Sbjct: 181 LLNEHDQVVLGDMGIPYLLLGIPLPNPDMVLRLGTPNYMAPEQWEPEVRGPISCETDTWG 240

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FGCSI+EMLTG+QPW G+S+EEIY SVVIK+EKP IPSGLPP VENV+ GCFEYDLRNRP
Sbjct: 241 FGCSIVEMLTGVQPWCGRSIEEIYQSVVIKQEKPHIPSGLPPEVENVLNGCFEYDLRNRP 300

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM DIL AFESSQNAVY+DG W GL SR  T+ S+ +GYT+W+  KD L VGD VRSRKP
Sbjct: 301 LMVDILQAFESSQNAVYSDGGWIGLESRTCTERSNSRGYTSWFLSKDSLHVGDIVRSRKP 360

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
           LNA KPQ +DVP GTVVG D D DR+  VLVKI G HNPLRV  S+LERVT GL   DWV
Sbjct: 361 LNACKPQIMDVPEGTVVGFDGDNDRDGFVLVKIRGKHNPLRVHVSTLERVTSGLVVTDWV 420

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            LK+ N +HS+VG+LHSVQRDGSV+VGF+GLETLWRG+ SE+QMA+ YYVGQFVR+  NV
Sbjct: 421 RLKEPNRKHSTVGILHSVQRDGSVAVGFLGLETLWRGHSSELQMAETYYVGQFVRLKTNV 480

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
           FTPRF+WPRK+GG W TG+I QVLPNGCLVV FPGRF  G  S S LADP+EVELVSFD 
Sbjct: 481 FTPRFDWPRKKGGAWVTGRIAQVLPNGCLVVRFPGRFVFGVESNSFLADPAEVELVSFDK 540

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKGQGNSKRGGNNCQ 600
           C GVVEKY HIED+HW+VRPL IA G+F  +KLG  VG +V  R++K   N       CQ
Sbjct: 541 CHGVVEKYHHIEDFHWAVRPLVIAFGVFTTLKLGVFVGGNVCVRMRKSPRNLTPNDGQCQ 600

Query: 601 DGQAAGGNGAWLRSPVANIIFREGVPATAAAR 632
           DGQ AGGN AW+   VANI+FREG P TA AR
Sbjct: 601 DGQ-AGGNPAWIPPTVANILFREG-PPTATAR 630

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743474|emb|CBI36341.3| unnamed protein product [Vitis vinifera]

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/581 (73%), Positives = 484/581 (83%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MAE+I A  P ASFEYELFEGDPDHLRTV AT TQ  PWIDP SLKLKHRIGRG FGDVW
Sbjct: 74  MAEKIGAAPPPASFEYELFEGDPDHLRTVAATSTQLSPWIDPASLKLKHRIGRGLFGDVW 133

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LATHHQSADD+DEYHE+AVKML  ++ED  ++F++KF  +F K R+ + VCWLHGIS+  
Sbjct: 134 LATHHQSADDYDEYHEVAVKMLHTIREDHMQMFLDKFAGIFLKCRQLKGVCWLHGISIKT 193

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GK+CIAMKFYEGSVGDR+A  +GGKLPL D+LRYGI+LAKGI +LHS G+LVLNLKPSN 
Sbjct: 194 GKVCIAMKFYEGSVGDRMAHLKGGKLPLSDVLRYGIELAKGIMELHSTGVLVLNLKPSNF 253

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL+EHDQ+VLGD GIPYLLLG  L + DM LRLGTPNYMAPEQWEPEVRGPIS ETDTWG
Sbjct: 254 LLNEHDQVVLGDMGIPYLLLGIPLPNPDMVLRLGTPNYMAPEQWEPEVRGPISCETDTWG 313

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FGCSI+EMLTG+QPW G+S+EEIY SVVIK+EKP IPSGLPP VENV+ GCFEYDLRNRP
Sbjct: 314 FGCSIVEMLTGVQPWCGRSIEEIYQSVVIKQEKPHIPSGLPPEVENVLNGCFEYDLRNRP 373

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM DIL AFESSQNAVY+DG W GL SR  T+ S+ +GYT+W+  KD L VGD VRSRKP
Sbjct: 374 LMVDILQAFESSQNAVYSDGGWIGLESRTCTERSNSRGYTSWFLSKDSLHVGDIVRSRKP 433

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
           LNA KPQ +DVP GTVVG D D DR+  VLVKI G HNPLRV  S+LERVT GL   DWV
Sbjct: 434 LNACKPQIMDVPEGTVVGFDGDNDRDGFVLVKIRGKHNPLRVHVSTLERVTSGLVVTDWV 493

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            LK+ N +HS+VG+LHSVQRDGSV+VGF+GLETLWRG+ SE+QMA+ YYVGQFVR+  NV
Sbjct: 494 RLKEPNRKHSTVGILHSVQRDGSVAVGFLGLETLWRGHSSELQMAETYYVGQFVRLKTNV 553

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
           FTPRF+WPRK+GG W TG+I QVLPNGCLVV FPGRF  G  S S LADP+EVELVSFD 
Sbjct: 554 FTPRFDWPRKKGGAWVTGRIAQVLPNGCLVVRFPGRFVFGVESNSFLADPAEVELVSFDK 613

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSV 581
           C GVVEKY HIED+HW+VRPL IA G+F  +KLG  VG +V
Sbjct: 614 CHGVVEKYHHIEDFHWAVRPLVIAFGVFTTLKLGVFVGGNV 654

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082051|emb|CBI21056.3| unnamed protein product [Vitis vinifera]

 Score =  836 bits (2160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/620 (65%), Positives = 495/620 (79%), Gaps = 4/620 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MA +  A + AA+FE+ELFEGDPDHLRTVVATP    PWIDP +LKL+HRIGRGPFGDVW
Sbjct: 113 MAGKAAATQSAAAFEFELFEGDPDHLRTVVATPNLISPWIDPATLKLRHRIGRGPFGDVW 172

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LAT H  A+D+DEYHE+A+KML P+KED  KV ++K E LF K +  + VCWLHGISVI+
Sbjct: 173 LATQHLFAEDYDEYHEVAIKMLHPIKEDLMKVVLDKLENLFSKCQGLKGVCWLHGISVIS 232

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GKICI MKFYEGS+GD++A  +GGKL L DILRYGI LA+ I +LHS  +LVLNLKP N 
Sbjct: 233 GKICIIMKFYEGSLGDKMAHLKGGKLSLRDILRYGIDLAQAILELHSKEILVLNLKPYNF 292

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL ++D+ +LGD GIPYLLL   L  SD+A RLGTPNYMAPEQW+PEVRGP+S ETD+WG
Sbjct: 293 LLDQNDEAILGDLGIPYLLLQIPLPSSDIARRLGTPNYMAPEQWQPEVRGPLSLETDSWG 352

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FGCSI+EMLTG+QPW GKSVEE++ SVV K+EKP IPSGLPPAVE VIIGCF YD R+RP
Sbjct: 353 FGCSIVEMLTGVQPWCGKSVEEVHDSVVRKQEKPFIPSGLPPAVERVIIGCFAYDFRSRP 412

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
            M +IL AF+SS+NAVY+DG WTGLGSR +TD   V GY+ W+  K++  VGD VRSRKP
Sbjct: 413 SMKNILEAFKSSENAVYSDGGWTGLGSRTITDNFIVNGYSEWFLSKENFLVGDLVRSRKP 472

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
            ++ KP+ +DVP GTVVGL+ D+D++  VLV++ G+H+PLRV + +LERVT GLAAGDWV
Sbjct: 473 PHSCKPENMDVPGGTVVGLERDSDQDGYVLVRVLGIHDPLRVHKYTLERVTSGLAAGDWV 532

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            L+ E+ R+S VG+LHS+ RDGSV VGFIG+ETLW+G+ + +QMA++Y  GQFVR+ ANV
Sbjct: 533 RLETEDRRNSRVGILHSISRDGSVDVGFIGMETLWKGSCTNLQMAESYCKGQFVRLKANV 592

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
            +PRFEWPRKRGG WATG+I QVLPNGCLVV FPGR P+G    S LADP+EVELVSF+T
Sbjct: 593 LSPRFEWPRKRGGAWATGRIWQVLPNGCLVVNFPGRLPIGDECSSFLADPAEVELVSFNT 652

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVG-GRLKKGQGNSKRGGNNC 599
            PG+V+KY+H+ED+HW+VRPL IALGLF+AMK G  VG+ +G GR K+ +G S    N  
Sbjct: 653 SPGLVKKYQHLEDFHWAVRPLLIALGLFSAMKFGIFVGKKIGIGRSKEKRGQSTMTQNES 712

Query: 600 Q--DGQAAGGNGAWLRSPVA 617
           Q  D Q A GN AWL   VA
Sbjct: 713 QRLDNQTA-GNAAWLPQTVA 731

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430314|ref|XP_002282747.1| PREDICTED: uncharacterized protein LOC100268069 [Vitis vinifera] gi|147822641|emb|CAN70648.1| hypothetical protein VITISV_025237 [Vitis vinifera]

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/620 (65%), Positives = 495/620 (79%), Gaps = 4/620 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MA +  A + AA+FE+ELFEGDPDHLRTVVATP    PWIDP +LKL+HRIGRGPFGDVW
Sbjct: 1   MAGKAAATQSAAAFEFELFEGDPDHLRTVVATPNLISPWIDPATLKLRHRIGRGPFGDVW 60

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LAT H  A+D+DEYHE+A+KML P+KED  KV ++K E LF K +  + VCWLHGISVI+
Sbjct: 61  LATQHLFAEDYDEYHEVAIKMLHPIKEDLMKVVLDKLENLFSKCQGLKGVCWLHGISVIS 120

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GKICI MKFYEGS+GD++A  +GGKL L DILRYGI LA+ I +LHS  +LVLNLKP N 
Sbjct: 121 GKICIIMKFYEGSLGDKMAHLKGGKLSLRDILRYGIDLAQAILELHSKEILVLNLKPYNF 180

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL ++D+ +LGD GIPYLLL   L  SD+A RLGTPNYMAPEQW+PEVRGP+S ETD+WG
Sbjct: 181 LLDQNDEAILGDLGIPYLLLQIPLPSSDIARRLGTPNYMAPEQWQPEVRGPLSLETDSWG 240

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FGCSI+EMLTG+QPW GKSVEE++ SVV K+EKP IPSGLPPAVE VIIGCF YD R+RP
Sbjct: 241 FGCSIVEMLTGVQPWCGKSVEEVHDSVVRKQEKPFIPSGLPPAVERVIIGCFAYDFRSRP 300

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
            M +IL AF+SS+NAVY+DG WTGLGSR +TD   V GY+ W+  K++  VGD VRSRKP
Sbjct: 301 SMKNILEAFKSSENAVYSDGGWTGLGSRTITDNFIVNGYSEWFLSKENFLVGDLVRSRKP 360

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
            ++ KP+ +DVP GTVVGL+ D+D++  VLV++ G+H+PLRV + +LERVT GLAAGDWV
Sbjct: 361 PHSCKPENMDVPGGTVVGLERDSDQDGYVLVRVLGIHDPLRVHKYTLERVTSGLAAGDWV 420

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            L+ E+ R+S VG+LHS+ RDGSV VGFIG+ETLW+G+ + +QMA++Y  GQFVR+ ANV
Sbjct: 421 RLETEDRRNSRVGILHSISRDGSVDVGFIGMETLWKGSCTNLQMAESYCKGQFVRLKANV 480

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
            +PRFEWPRKRGG WATG+I QVLPNGCLVV FPGR P+G    S LADP+EVELVSF+T
Sbjct: 481 LSPRFEWPRKRGGAWATGRIWQVLPNGCLVVNFPGRLPIGDECSSFLADPAEVELVSFNT 540

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVG-GRLKKGQGNSKRGGNNC 599
            PG+V+KY+H+ED+HW+VRPL IALGLF+AMK G  VG+ +G GR K+ +G S    N  
Sbjct: 541 SPGLVKKYQHLEDFHWAVRPLLIALGLFSAMKFGIFVGKKIGIGRSKEKRGQSTMTQNES 600

Query: 600 Q--DGQAAGGNGAWLRSPVA 617
           Q  D Q A GN AWL   VA
Sbjct: 601 QRLDNQTA-GNAAWLPQTVA 619

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548886|ref|XP_002515499.1| protein kinase, putative [Ricinus communis] gi|223545443|gb|EEF46948.1| protein kinase, putative [Ricinus communis]

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/632 (63%), Positives = 493/632 (78%), Gaps = 5/632 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MA ++   +PA SFEYELFEGD D LRTVVA+  Q+ PWIDP +LKL+HRIGRGPFGDVW
Sbjct: 1   MAGKVVPAQPATSFEYELFEGDYDRLRTVVASSNQSTPWIDPENLKLRHRIGRGPFGDVW 60

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LATHH S +D+DEYHE+A+KML P+KED  +V ++KF++LF K    + VC + GIS+IN
Sbjct: 61  LATHHHSTEDYDEYHEVALKMLHPVKEDHVRVLLDKFDDLFLKCGGIEGVCLIRGISIIN 120

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GKICI M+FYEGS+GD++A+++GGK+ L D+LRYGI+LA+G+ +LH+  LLVLNLK SN 
Sbjct: 121 GKICIIMRFYEGSIGDKMARRKGGKISLADVLRYGIELAQGVLELHAKDLLVLNLKSSNF 180

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL+E+DQ +LGD GIPYLLLG  L  SDM+  LGTPNYMAPEQW+PEVRGP+S ETD+WG
Sbjct: 181 LLNENDQAILGDVGIPYLLLGIPLRSSDMSYMLGTPNYMAPEQWQPEVRGPLSAETDSWG 240

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           F C ++EMLTGIQPW G+SVEEIY  VV K+EKP IP GLPP VENV+  CFEYD RNRP
Sbjct: 241 FACGVVEMLTGIQPWSGRSVEEIYDLVVRKQEKPRIPEGLPPPVENVLHSCFEYDFRNRP 300

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM DIL  F+SSQNAVY DG W  LGSR + D S   GY+ W+ LKDHLQVGDTVRSRKP
Sbjct: 301 LMKDILRIFKSSQNAVYGDGGWRELGSRTILDKSGGTGYSKWFLLKDHLQVGDTVRSRKP 360

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
           LN+ K + +DVP   VVGL+ D D++  +LV++ G+H+PLRV   +LERVTFGLAAGDWV
Sbjct: 361 LNSSKSENMDVPEAIVVGLERDADQDGFLLVRVLGIHDPLRVPILTLERVTFGLAAGDWV 420

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            LK+EN RHS VG+LHS+ RDGSV+VGFIG+ET W+GN SE+QMAK+Y+VGQFVR+ A +
Sbjct: 421 RLKEENKRHSPVGILHSINRDGSVAVGFIGVETFWKGNSSELQMAKSYFVGQFVRLKAKI 480

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
            +PRFEWPRKR G WATGKI  +LPNGCLVV FPGR   G    + LADP EVE VSF+T
Sbjct: 481 LSPRFEWPRKRQGAWATGKIRHILPNGCLVVNFPGRLTFGEEHNTFLADPGEVEEVSFNT 540

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVG-GRLKKGQGNSKRGGNNC 599
           CPG+V+KY+H+ED HW+VRPL IALGLF AMK+G  VG+ +G  + +K + N  +  +  
Sbjct: 541 CPGMVKKYQHLEDIHWAVRPLLIALGLFTAMKVGVFVGKKMGRSKGRKLESNVVQNDDQP 600

Query: 600 QDGQAAGGNG-AWLRSPVANIIFREGVPATAA 630
             G ++G +G AW    VANI+   GV   AA
Sbjct: 601 MAGPSSGHSGQAWFPPSVANIL---GVTTAAA 629

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089274|ref|XP_002308671.1| predicted protein [Populus trichocarpa] gi|222854647|gb|EEE92194.1| predicted protein [Populus trichocarpa]

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/582 (66%), Positives = 481/582 (82%), Gaps = 1/582 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MA ++   +P   FE+EL+E DPDHLRTVVA+ +Q  P IDP  LKL+HRIGRGPFGDVW
Sbjct: 1   MASKVVPAQPVTPFEFELYE-DPDHLRTVVASSSQPTPRIDPAKLKLRHRIGRGPFGDVW 59

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LATHHQS +D+DE HE+AVKML P+KE+  +V ++KF+ LF K +  ++VC+LHGISVIN
Sbjct: 60  LATHHQSTEDYDECHEVAVKMLHPIKEEHMRVVLDKFDNLFSKCQGIENVCFLHGISVIN 119

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GKICI MKFYEGSVGD++A+ +GGKL LPD+LRYGI LA+GI+ LH+  +LV NLKP + 
Sbjct: 120 GKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRYGIVLAQGIAQLHAKEILVFNLKPCSF 179

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL+E+DQ VLGD GIP+LL G  L  +DM+ RLGTPNYMAPEQW+PE+RGP+SFETD+WG
Sbjct: 180 LLNENDQAVLGDVGIPFLLFGIPLPSADMSRRLGTPNYMAPEQWQPEIRGPVSFETDSWG 239

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FGCS++EMLTG+QPW GKSVEEIY SVV K+EKP IP GLPP VENV++GCFEYDLR+RP
Sbjct: 240 FGCSVVEMLTGVQPWRGKSVEEIYESVVRKQEKPRIPEGLPPPVENVLLGCFEYDLRSRP 299

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM DI+  F+SSQNAV+ DG WTG GSR   +  S  GYT W+  KDHLQVGD VRSR+P
Sbjct: 300 LMTDIVRVFKSSQNAVFVDGGWTGFGSRTTLEKFSGTGYTEWFLSKDHLQVGDMVRSRRP 359

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
            N+ KP+ +DVP GTVVGL+ D DR+  VLV++ G+H+PLR+  S+LERVTFGLAAGDWV
Sbjct: 360 PNSCKPENMDVPEGTVVGLERDPDRDGFVLVRVHGIHDPLRLPVSTLERVTFGLAAGDWV 419

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            LK+E+ RHS VG+LHS++RDGSV+VGFIG+ETLW+GN SE+QMA+ Y+VGQFVR  ANV
Sbjct: 420 HLKEEDRRHSPVGILHSIKRDGSVAVGFIGVETLWKGNSSELQMAEPYFVGQFVRPRANV 479

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
            +PRFEWPRK GG WATG+I  +LPNGCL+V FPGR  +G  + S LADP+EVE+VSF++
Sbjct: 480 LSPRFEWPRKTGGAWATGRIWWILPNGCLIVKFPGRLTIGQENSSFLADPAEVEVVSFNS 539

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVG 582
           CPGVV+KY+H ED+HW+VRPL IALG+F AMK+G+ VG+ +G
Sbjct: 540 CPGVVKKYQHFEDFHWAVRPLVIALGIFTAMKVGFFVGKKIG 581

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141907|ref|XP_002324302.1| predicted protein [Populus trichocarpa] gi|222865736|gb|EEF02867.1| predicted protein [Populus trichocarpa]

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/562 (65%), Positives = 466/562 (82%), Gaps = 1/562 (0%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
           LKL+HRIGRGPFGDVWLATHHQS +D+DEYHE+AVKML PLKE+  ++ ++KF+ LF K 
Sbjct: 1   LKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAVKMLQPLKEEHMRLVLDKFDGLFSKC 60

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
           +  ++VC+LHGISV+NGKICI MKFYEGS+GD++A  +GGKL LPD+LRYGI+LA+GI++
Sbjct: 61  QGVENVCFLHGISVMNGKICIVMKFYEGSIGDKMALLKGGKLTLPDVLRYGIELAQGIAE 120

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH+  +LVLNLKP + LL+E+DQ VLGD GIPYLL G  L+ SDM  RLGTPNYMAPEQW
Sbjct: 121 LHAKEILVLNLKPCSFLLNENDQAVLGDIGIPYLLFGIPLTSSDMPWRLGTPNYMAPEQW 180

Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV 284
           +PE+RGPIS ETD+WGFGCSI+EMLTG+ PW GKS+EEIY SVV K+EKP IP GLPP V
Sbjct: 181 QPEIRGPISSETDSWGFGCSIVEMLTGVLPWCGKSIEEIYDSVVRKQEKPHIPEGLPPPV 240

Query: 285 ENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYP 344
           EN+++GCFEYDLR+RPLM DIL  F+SSQNAV+ DG WTG GSR + + SS  GYT W+ 
Sbjct: 241 ENILLGCFEYDLRSRPLMTDILRVFKSSQNAVFVDGGWTGFGSRTILEKSSGAGYTEWFL 300

Query: 345 LKDHLQVGDTVRSRKPLNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQE 404
            KDHLQVGD VRSR+P N+ KP+ +DVP GTVVGL+ + DR+  VLV + G+H+PLR+  
Sbjct: 301 SKDHLQVGDMVRSRRPPNSCKPENMDVPEGTVVGLERNPDRDGFVLVSVHGIHDPLRLPV 360

Query: 405 SSLERVTFGLAAGDWVSLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQM 464
           S+LE+V+FGLAAGDWV LK+EN++HS VG+LHS+ RDGSV+VGFIG+ETLW+G YSE+QM
Sbjct: 361 STLEKVSFGLAAGDWVHLKEENNKHSPVGILHSINRDGSVAVGFIGVETLWKGKYSELQM 420

Query: 465 AKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSG 524
           A++Y+VGQFVR+  NV +PRFEWPRK GG WATGKI  +LPNGCL+V FPGRF +G  + 
Sbjct: 421 AESYFVGQFVRLKTNVLSPRFEWPRKTGGAWATGKIWWILPNGCLIVKFPGRFTIGQENS 480

Query: 525 SSLADPSEVELVSFDTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSV-GG 583
           S LADP+EVE+VSF+TCPGVV+KY+H+ED+HW+VRPL IALG+F AMK+G+  G+ +   
Sbjct: 481 SFLADPAEVEVVSFNTCPGVVKKYQHLEDFHWAVRPLVIALGIFTAMKVGFFTGKKIRRS 540

Query: 584 RLKKGQGNSKRGGNNCQDGQAA 605
           R+ + +GN+ +      DGQ +
Sbjct: 541 RVNRPRGNAVQSNGQYTDGQTS 562

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437150|ref|XP_004136355.1| PREDICTED: uncharacterized protein LOC101208616 [Cucumis sativus] gi|449525714|ref|XP_004169861.1| PREDICTED: uncharacterized LOC101208616 [Cucumis sativus]

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/629 (57%), Positives = 481/629 (76%), Gaps = 4/629 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           M+ Q  A +P  SFEYEL +GD DH+RTVVA+   + P I+P+ +KL+HRIGRG FGDVW
Sbjct: 1   MSTQEAASQPVPSFEYELLDGDTDHVRTVVASSNYSSPRIEPSKVKLRHRIGRGVFGDVW 60

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           LATHHQS  D+DEYHE+AVKML P+KED  +V ++K E+ F K + ++ VC L+G+S+I 
Sbjct: 61  LATHHQSTKDYDEYHEVAVKMLNPVKEDHMRVVLDKLEDRFYKCQAAKGVCRLYGVSIIG 120

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           GK+CI MKFYEGS+ D++A+ + GKL  PD+LRYGI LA+GI +LHS  +LVLN+KPSN+
Sbjct: 121 GKLCIIMKFYEGSIADKMARLKDGKLSPPDVLRYGINLAQGIFELHSKEILVLNMKPSNM 180

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL+  DQ +LGD GIP+LL    + +SD+  RLGTPNYMAPEQW+PEVRGPIS+ETD+WG
Sbjct: 181 LLTTKDQAILGDIGIPFLLHSVPIPNSDIVQRLGTPNYMAPEQWQPEVRGPISYETDSWG 240

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           F C I+EMLTG+QPW GKSV+EI+HSVV K+EKPCIPSGLPP +ENV++GCFEYDLR+RP
Sbjct: 241 FACCIIEMLTGVQPWRGKSVDEIFHSVVRKQEKPCIPSGLPPLIENVLLGCFEYDLRSRP 300

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM DIL+ F+S Q+    +G+W  +GS  + + SS  G+T W+  KDHLQV D VRSRKP
Sbjct: 301 LMTDILNVFQSFQHV---NGDWQAIGSSKVLNKSSATGHTEWFLSKDHLQVNDLVRSRKP 357

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
           LN+ K   +++P G +VGL+ +T++++ VLV++ G+H+P+RV  S+LERV+FGLAAGDW+
Sbjct: 358 LNSCKSDNMNIPEGKIVGLEGETEKDAFVLVRVRGIHDPVRVYASTLERVSFGLAAGDWI 417

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            LK+ + +HS VG+LHS+ R G+V+V FIG+ETLW+GN S+ QMA+++ VGQFVR+ A++
Sbjct: 418 RLKEADKKHSPVGILHSIDRVGNVAVAFIGVETLWKGNSSQFQMAESFCVGQFVRIKASI 477

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
             PRFEW RK+G  WATGKI  +LPNGCL+V FPG         S +ADP+EVE+V+F T
Sbjct: 478 LRPRFEWLRKKGSVWATGKIWWILPNGCLMVKFPGILSFKEECNSYMADPAEVEVVNFST 537

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKGQGNSKRGGNNCQ 600
           CPG+V+KY+H+ED+HWSVRP+ IA G+F AMKLG   G+    ++KKGQ N     +   
Sbjct: 538 CPGMVKKYQHLEDFHWSVRPILIAFGMFTAMKLGIAFGKVGRSKVKKGQSNLVYCESQHV 597

Query: 601 DGQAAGGNGAWLRSPVANIIFREGVPATA 629
           +GQ    N AW+  PV NI+F + V   A
Sbjct: 598 EGQNT-NNPAWIPPPVKNILFGDSVNTVA 625

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357123184|ref|XP_003563292.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like isoform 1 [Brachypodium distachyon]

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/628 (57%), Positives = 468/628 (74%), Gaps = 6/628 (0%)

Query: 1   MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
           MA Q    +PA  FEY L E DPDH RTV + P+Q  PWIDP+ L LKHRIGRGPFGDVW
Sbjct: 1   MAGQSSDPQPAELFEYMLLEKDPDHYRTVFSGPSQISPWIDPSVLSLKHRIGRGPFGDVW 60

Query: 61  LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
           +ATHHQ  +D+D YHE+AVKML P+K+D  +VF  +F+E+F K +   SVC+LHGIS  N
Sbjct: 61  IATHHQRTEDYDRYHEVAVKMLHPVKDDQLQVFSARFDEIFGKCQGLGSVCFLHGISTQN 120

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL 180
           G+ICIAMKFYEGS+GD++A+ +GG+LPL D+LRYG  LA+G+ DLHS G+L+LNLKP N 
Sbjct: 121 GRICIAMKFYEGSIGDKMARHKGGRLPLSDVLRYGADLARGVLDLHSRGILILNLKPCNF 180

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
           LL +HD  VLGDFGIP LL G SL + D+  RLGT NYMAPEQW+P +RGPIS+ETD+WG
Sbjct: 181 LLDDHDHAVLGDFGIPSLLFGLSLPNPDLIQRLGTANYMAPEQWQPGIRGPISYETDSWG 240

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           F CSI+EM +GIQPW GKS +EIY  VV+KKEKP  P  LPP V+NV+ GCFEYD R+RP
Sbjct: 241 FACSILEMFSGIQPWRGKSPDEIYQLVVLKKEKPIFPYNLPPEVKNVLSGCFEYDFRDRP 300

Query: 301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
           LM DILHAFES+++  Y++  W       + +  +    T W   KD LQVGD VRSRK 
Sbjct: 301 LMTDILHAFESAKDVDYDNAGWNS-SEHLMAERPTQPSCTNWSLFKDKLQVGDKVRSRKL 359

Query: 361 LNARKPQTVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWV 420
            N+  P+T+++P GT+VGL+ D + +  +LV++ G H+PL+V+ S++ERVT+G AAGDWV
Sbjct: 360 KNSCTPETMEIPDGTIVGLEKDGECDGYILVRVHGRHDPLKVRSSTVERVTYGFAAGDWV 419

Query: 421 SLKDENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGANV 480
            L++E+ + S VG+LHS+ R+G+V VG IG++TLW+G Y+++QMA+AY VGQFV +  N+
Sbjct: 420 RLREEDKKRSQVGILHSIDRNGTVHVGLIGMDTLWKGEYADLQMAEAYCVGQFVMLRTNI 479

Query: 481 FTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSFDT 540
            +PRFEW RKRGG +ATG+I Q+LPNGCLVV FPG+F LG    S LADPSEVE VSFD 
Sbjct: 480 SSPRFEWQRKRGGGFATGRISQILPNGCLVVKFPGKFNLGEVC-SCLADPSEVEAVSFDK 538

Query: 541 CPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGG-RLKKGQGNSKRGGNNC 599
           C G+V+KY+H+ED+HW+VRPL IA+G F AMKLG  VG+ +   R +K    S + G++ 
Sbjct: 539 CEGIVKKYEHLEDFHWAVRPLFIAIGFFTAMKLGIFVGKGIARPRSRKVASVSDQSGDHQ 598

Query: 600 QDGQAAGGN---GAWLRSPVANIIFREG 624
           +  Q    N    AWL  PVAN++F +G
Sbjct: 599 KFQQQEVQNSASAAWLPPPVANMLFGDG 626

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	632
TAIR|locus:2116545	611	AT4G32250 [Arabidopsis thalian	0.954	0.986	0.573	4.9e-188
TAIR|locus:2185061	1625	KEG "AT5G13530" [Arabidopsis t	0.150	0.058	0.349	4.9e-29
TAIR|locus:2121154	575	STY46 "serine/threonine/tyrosi	0.466	0.513	0.271	1.2e-15
TAIR|locus:2827943	546	STY8 "serine/threonine/tyrosin	0.454	0.525	0.251	1.2e-13
WB|WBGene00003472	1420	mtk-1 [Caenorhabditis elegans	0.417	0.185	0.252	2.8e-13
UNIPROTKB|E1BXA3	494	HCK "Uncharacterized protein"	0.420	0.538	0.260	5.1e-13
TAIR|locus:2077244	391	ATMRK1 [Arabidopsis thaliana (	0.287	0.465	0.269	6.6e-13
RGD|621319	517	Fgr "Gardner-Rasheed feline sa	0.419	0.512	0.268	9.3e-13
MGI|MGI:95527	517	Fgr "Gardner-Rasheed feline sa	0.419	0.512	0.265	2e-12
UNIPROTKB|A8K4G3	506	HCK "cDNA FLJ78472, highly sim	0.419	0.523	0.248	2.5e-12

TAIR|locus:2116545 AT4G32250 [Arabidopsis thaliana (taxid:3702)]

 Score = 1823 (646.8 bits), Expect = 4.9e-188, P = 4.9e-188
 Identities = 354/617 (57%), Positives = 449/617 (72%)

Query:     1 MAEQIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVW 60
             MA +I A KP  + EYE+ EG+ +      A    T PW++ ++LKL+HRIGRGPFGDVW
Sbjct:     1 MASKIIAGKPDDT-EYEIIEGESES-----ALAAGTSPWMNSSTLKLRHRIGRGPFGDVW 54

Query:    61 LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
             LATHHQS +D+DE+HE+A+KML P+KED  +V V+KFE+LF K +  ++VC L G+S IN
Sbjct:    55 LATHHQSTEDYDEHHEVAIKMLYPIKEDQRRVVVDKFEDLFSKCQGLENVCLLRGVSSIN 114

Query:   121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXX 180
             GKIC+ MKFYEGS+GD++A+ +GGKL LPD+LRYG+ LA GI +LHS G           
Sbjct:   115 GKICVVMKFYEGSLGDKMARLKGGKLSLPDVLRYGVDLATGILELHSKGFLILNLKPSNF 174

Query:   181 XXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
                ++D+ +LGD GIPYLLL   L  SDM  RLGTPNYMAPEQW+P+VRGP+SFETD+WG
Sbjct:   175 LLSDNDKAILGDVGIPYLLLSIPLPSSDMTERLGTPNYMAPEQWQPDVRGPMSFETDSWG 234

Query:   241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
             FGCSI+EMLTG+QPW G+S +EIY  VV K+EK  IPS +PP +EN++ GCF YDLR+RP
Sbjct:   235 FGCSIVEMLTGVQPWSGRSADEIYDLVVRKQEKLSIPSSIPPPLENLLRGCFMYDLRSRP 294

Query:   301 LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKP 360
              M DIL   +S QN+        G+ SR +  +S+  GYT W+  KDHLQV DTVRSRKP
Sbjct:   295 SMTDILLVLKSLQNSEEEQVR-RGIDSREIRKSSATLGYTEWFLSKDHLQVRDTVRSRKP 353

Query:   361 LNARKPQTVDVPAGTVVGLDAD-TDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDW 419
              N+ K + +DVP G VVGL+ D TD +  VLVK+ G+H+PLRV  S LERVT GLA+GDW
Sbjct:   354 ANSCKHENMDVPEGMVVGLERDSTDPDGFVLVKVHGVHDPLRVHVSVLERVTNGLASGDW 413

Query:   420 VSLK-DENSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYYVGQFVRVGA 478
             V LK  ++ RHS VGVLHS+ R+G+V+VGFIGL TLW+G  S++QMAK Y VGQFV++ A
Sbjct:   414 VRLKVRKDKRHSPVGVLHSIDREGNVAVGFIGLPTLWKGTSSQLQMAKVYSVGQFVKLKA 473

Query:   479 NVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSLADPSEVELVSF 538
             NV  PRF+W RK  G WATG+I QVLPNGCL V FPG  P G   GS LADP+EVE+V+F
Sbjct:   474 NVVIPRFKWMRKGRGIWATGRISQVLPNGCLEVDFPGMLPFGEEHGSYLADPAEVEIVNF 533

Query:   539 DTCPGVVEKYKHIEDYHWSVRPLAIALGLFAAMKLGWLVGRSVGGRLKKG-QGNSKRGGN 597
             +TC G VEKY+H+ED+HW+VRPL IA+GL  AMKLG  V + +G R K G Q +   G  
Sbjct:   534 NTCQGAVEKYQHLEDFHWAVRPLLIAMGLLTAMKLGICVRKKIG-RSKDGKQRDGSTGQG 592

Query:   598 NCQ--DGQAAGGNGAWL 612
             +C+  DG+ +     WL
Sbjct:   593 DCKIPDGKGSD-KSKWL 608

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0010260 "organ senescence" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2185061 KEG "AT5G13530" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 4.9e-29, Sum P(3) = 4.9e-29
 Identities = 37/106 (34%), Positives = 55/106 (51%)

Query:   215 TPNYMAPEQWEP------EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
             +P+Y APE W P      E    +S E+D W FGC+++EM TG  PW G S EEI+ +VV
Sbjct:   321 SPHYTAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMCTGSTPWDGLSREEIFQAVV 380

Query:   269 IKKEKP-----CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
               ++ P      +  G+P  +  +I  C ++    RP    +L  F
Sbjct:   381 KARKVPPQYERIVGVGIPRELWKMIGECLQFKPSKRPTFNAMLATF 426

GO:0004672 "protein kinase activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IGI;IMP

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0048589 "developmental growth" evidence=IMP

GO:0006952 "defense response" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0005769 "early endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0043621 "protein self-association" evidence=IPI

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0016197 "endosomal transport" evidence=IMP

GO:0032940 "secretion by cell" evidence=IMP

TAIR|locus:2121154 STY46 "serine/threonine/tyrosine kinase 46" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 88/324 (27%), Positives = 138/324 (42%)

Query:    13 SFEYELFEGDPDHLRTVVATPTQ-TRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADD 70
             SF  E   G     RT V  P   T  W I+   LK  H+I  G +GD++  T+      
Sbjct:   257 SFSPEKENGQTG-ARTHVPIPNDGTDVWEINLKHLKFGHKIASGSYGDLYKGTYCSQ--- 312

Query:    71 FDEYHELAVKMLLP--LKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK 128
                  E+A+K+L P  L  D  K F  +   +  K R    V ++ G       +CI  +
Sbjct:   313 -----EVAIKVLKPERLDSDLEKEFAQEVF-IMRKVRHKNVVQFI-GACTKPPHLCIVTE 365

Query:   129 FYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQ 187
             F  G SV D + +Q+G    LP + +  I + KG+S LH                 E++ 
Sbjct:   366 FMPGGSVYDYLHKQKG-VFKLPTLFKVAIDICKGMSYLHQNNIIHRDLKAANLLMDENEV 424

Query:   188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
             + + DFG+  +     +    M    GT  +MAPE  E +   P   + D + +G  + E
Sbjct:   425 VKVADFGVARVKAQTGV----MTAETGTYRWMAPEVIEHK---PYDHKADVFSYGIVLWE 477

Query:   248 MLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
             +LTG  P+   +  +    VV K  +P IP    P +  ++   +E+D   RP  ++I+ 
Sbjct:   478 LLTGKLPYEYMTPLQAAVGVVQKGLRPTIPKNTHPKLAELLERLWEHDSTQRPDFSEIIE 537

Query:   308 AFESSQNAVYNDGEW-----TGLG 326
               +     V  +GE      TGLG
Sbjct:   538 QLQEIAKEVGEEGEEKKKSSTGLG 561

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IGI

GO:0007015 "actin filament organization" evidence=RCA

TAIR|locus:2827943 STY8 "serine/threonine/tyrosine kinase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 79/314 (25%), Positives = 138/314 (43%)

Query:     9 KPAASFEYELFEGDPDHLRTVVATPTQ-TRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQ 66
             K  + FE++  +   + +   +  PT  T  W ID T LK++ ++  G +GD+   T+  
Sbjct:   250 KSISFFEHD--KSSNELIPACIEIPTDGTDEWEIDVTQLKIEKKVASGSYGDLHRGTYCS 307

Query:    67 SADDFDEYHELAVKMLLPLKEDCAKVFVNKF-EELF--PKFRESQSVCWLHGISVINGKI 123
                      E+A+K L P + +     + +F +E+F   K R    V +L G    +  +
Sbjct:   308 Q--------EVAIKFLKPDRVN--NEMLREFSQEVFIMRKVRHKNVVQFL-GACTRSPTL 356

Query:   124 CIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXX 182
             CI  +F   GS+ D + +Q+     L  +L+  + +AKG+S LH                
Sbjct:   357 CIVTEFMARGSIYDFLHKQKCA-FKLQTLLKVALDVAKGMSYLHQNNIIHRDLKTANLLM 415

Query:   183 XEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
              EH  + + DFG+  +     +    M    GT  +MAPE  E +   P + + D + + 
Sbjct:   416 DEHGLVKVADFGVARV----QIESGVMTAETGTYRWMAPEVIEHK---PYNHKADVFSYA 468

Query:   243 CSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM 302
               + E+LTG  P+   +  +    VV K  +P IP    P V+ ++  C+  D   RPL 
Sbjct:   469 IVLWELLTGDIPYAFLTPLQAAVGVVQKGLRPKIPKKTHPKVKGLLERCWHQDPEQRPLF 528

Query:   303 ADILHAFESSQNAV 316
              +I+   +     V
Sbjct:   529 EEIIEMLQQIMKEV 542

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IGI

GO:0007015 "actin filament organization" evidence=RCA

WB|WBGene00003472 mtk-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 212 (79.7 bits), Expect = 2.8e-13, P = 2.8e-13
 Identities = 73/289 (25%), Positives = 125/289 (43%)

Query:    42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKFEE 99
             P    L   I  G FG V     H+ A D D +  +A K++   +E+   +   +N F +
Sbjct:  1122 PFQWALLDHIASGSFGSV-----HR-AMDIDSHRVIAAKVMRIQRENHKAIESEINIFRQ 1175

Query:   100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
             L       +++   +G+ V +  + I M++      +RI     GK+ L  + +Y   L 
Sbjct:  1176 LI-----HENLVKYYGVQVEDSDVIIFMEYCSQGTLERICH---GKMDLKMVRQYTNSLL 1227

Query:   160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
             + +  LHS                +   L LGDFG    L+  S    +     GTP +M
Sbjct:  1228 RAVQYLHSHKIIHRDIKPANIFLDKCTVLKLGDFGCSSRLVESSTVYGEFQTTAGTPQFM 1287

Query:   220 APEQW----EPEVRGPISF---ETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
             APE +    + E  G  S      D W  G +++ M+TG  P+ G++  +I  ++  +K+
Sbjct:  1288 APEIYSYGEKDETTGSYSGYGRSVDIWALGATVVNMMTGKVPFEGQTRHQIAFALCFRKQ 1347

Query:   273 KPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND 319
             KP  P  +   P V+     CFE+   +RP  A++L    ++ N  + D
Sbjct:  1348 KPTYPDIADKRPDVKRFFDNCFEFLPNDRPTAAELLQTTFANVNITFQD 1396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0016246 "RNA interference" evidence=IMP

UNIPROTKB|E1BXA3 HCK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 203 (76.5 bits), Expect = 5.1e-13, P = 5.1e-13
 Identities = 79/303 (26%), Positives = 133/303 (43%)

Query:    31 ATPTQTRPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP 84
             + P   +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P
Sbjct:   209 SVPRPQKPWEKDAWEIPRASLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP 261

Query:    85 LKEDCAKVFVNKF-EEL-FPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQ 141
                    + V+ F EE    K  +   +  LH +      I I  +F E GS+ D +  +
Sbjct:   262 -----GSMSVSAFLEEANLMKSLQHDKLVRLHAVVTREEPIYIITEFMEKGSLLDFLKSE 316

Query:   142 RGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLG 201
              G K PLP ++ +  Q+A+G++ +                        + DFG     L 
Sbjct:   317 EGNKQPLPKLIDFSAQIAEGMAYIEKRNYIHRDLRAANILVSAMLVCKIADFG-----LA 371

Query:   202 RSLSDSDMALRLGT--P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFG 257
             R + D++   R G   P  + APE       G  + ++D W FG  + E++T G  P+ G
Sbjct:   372 RIIEDNEYVAREGAKFPIKWTAPEAIN---YGSFTIKSDVWSFGILLTEIVTYGRIPYPG 428

Query:   258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQN 314
              S  E+  ++      P   S  P  + +V+I C++    +RP    M  IL  F ++  
Sbjct:   429 MSSAEVIRALEHGYRMPRTES-CPEELYDVMIRCWKTKPEDRPTFEYMQSILEDFFTATE 487

Query:   315 AVY 317
               Y
Sbjct:   488 GQY 490

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0050830 "defense response to Gram-positive bacterium" evidence=IEA

TAIR|locus:2077244 ATMRK1 [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
 Identities = 51/189 (26%), Positives = 91/189 (48%)

Query:   124 CIAMKFYEGSVGDR-IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXX 182
             C+ +++  G    + + ++   KLP+ D+++  + LA+G+S LHS               
Sbjct:   182 CVVVEYVAGGTLKKFLIKKYRAKLPIKDVIQLALDLARGLSYLHSKAIVHRDVKSENMLL 241

Query:   183 XEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
               +  L + DFG+  +    + +  DM    GT  YMAPE  E +   P + + D + FG
Sbjct:   242 QPNKTLKIADFGVARV---EAQNPQDMTGETGTLGYMAPEVLEGK---PYNRKCDVYSFG 295

Query:   243 CSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM 302
               + E+     P+   S  EI H+VV +  +P IP   P AV N++  C++ +   RP M
Sbjct:   296 VCLWEIYCCDMPYADCSFAEISHAVVHRNLRPEIPKCCPHAVANIMKRCWDPNPDRRPEM 355

Query:   303 ADILHAFES 311
              +++   E+
Sbjct:   356 EEVVKLLEA 364

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;TAS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

RGD|621319 Fgr "Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog" [Rattus norvegicus (taxid:10116)]

 Score = 201 (75.8 bits), Expect = 9.3e-13, P = 9.3e-13
 Identities = 79/294 (26%), Positives = 128/294 (43%)

Query:    39 W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
             W ID  S+ L  R+G G FGDVWL T + S        ++AVK L P      K F+ + 
Sbjct:   244 WEIDRNSIALDRRLGTGCFGDVWLGTWNCST-------KVAVKTLKPGTMS-PKAFLEEA 295

Query:    98 EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGI 156
             + +  K      +  L+ + V    I I  +F   GS+ D +  ++G  L LP+++    
Sbjct:   296 QIM--KLLRHDKLVQLYAV-VSEEPIYIVTEFMCYGSLLDFLKDRKGHNLMLPNLVDMAA 352

Query:   157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT- 215
             Q+A+G++ +  +               EH    + DFG     L R + D +   + GT 
Sbjct:   353 QVAEGMAYMERMNYIHRDLRAANILVGEHLICKIADFG-----LARLIVDDEYNPQQGTK 407

Query:   216 -P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
              P  + APE     + G  + ++D W FG  + E++T G  P+ G +  E+   V     
Sbjct:   408 FPIKWTAPEA---ALFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYH 464

Query:   273 KPCIPSGLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQNAVYNDGEWT 323
              PC P G P ++  V+   +  D   RP    +   L  + +S    Y  G+ T
Sbjct:   465 MPC-PPGCPVSLYEVMEQTWRLDPEERPTFEYLQSFLEDYFTSTEPQYQPGDQT 517

GO:0001784 "phosphotyrosine binding" evidence=ISO;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=ISO;IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005758 "mitochondrial intermembrane space" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0007229 "integrin-mediated signaling pathway" evidence=ISO;ISS

GO:0008150 "biological_process" evidence=ND

GO:0008360 "regulation of cell shape" evidence=ISO;ISS

GO:0014068 "positive regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA;ISO

GO:0015629 "actin cytoskeleton" evidence=ISO;ISS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO;ISS

GO:0019901 "protein kinase binding" evidence=ISO;ISS

GO:0030335 "positive regulation of cell migration" evidence=ISO;ISS

GO:0032587 "ruffle membrane" evidence=ISO;ISS

GO:0034987 "immunoglobulin receptor binding" evidence=ISO;ISS

GO:0034988 "Fc-gamma receptor I complex binding" evidence=IEA;ISO

GO:0043306 "positive regulation of mast cell degranulation" evidence=ISO;ISS

GO:0043552 "positive regulation of phosphatidylinositol 3-kinase activity" evidence=IEA;ISO

GO:0045087 "innate immune response" evidence=IEA

GO:0045088 "regulation of innate immune response" evidence=ISO;ISS

GO:0045859 "regulation of protein kinase activity" evidence=ISO;ISS

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0050715 "positive regulation of cytokine secretion" evidence=ISO;ISS

GO:0050764 "regulation of phagocytosis" evidence=ISO;ISS

GO:0050830 "defense response to Gram-positive bacterium" evidence=ISO;ISS

GO:0005856 "cytoskeleton" evidence=ISO

MGI|MGI:95527 Fgr "Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog" [Mus musculus (taxid:10090)]

 Score = 198 (74.8 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 78/294 (26%), Positives = 128/294 (43%)

Query:    39 W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
             W ID  S+ L+ R+G G FGDVWL T + S        ++AVK L P      K F+ + 
Sbjct:   244 WEIDRNSIALERRLGTGCFGDVWLGTWNCST-------KVAVKTLKPGTMS-PKAFLEEA 295

Query:    98 EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGI 156
             + +  K      +  L+ + V    I I  +F   GS+ D +  + G  L LP ++    
Sbjct:   296 QIM--KLLRHDKLVQLYAV-VSEEPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAA 352

Query:   157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT- 215
             Q+A+G++ +  +               E+    + DFG     L R + D++   + GT 
Sbjct:   353 QVAEGMAYMERMNYIHRDLRAANILVGEYLICKIADFG-----LARLIEDNEYNPQQGTK 407

Query:   216 -P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
              P  + APE     + G  + ++D W FG  + E++T G  P+ G +  E+   V     
Sbjct:   408 FPIKWTAPEA---ALFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYH 464

Query:   273 KPCIPSGLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQNAVYNDGEWT 323
              PC P G P ++  V+   +  D   RP    +   L  + +S    Y  G+ T
Sbjct:   465 MPC-PPGCPASLYEVMEQAWRLDPEERPTFEYLQSFLEDYFTSTEPQYQPGDQT 517

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=ISO;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=ISO;IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0014068 "positive regulation of phosphatidylinositol 3-kinase cascade" evidence=ISO

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO;IDA

GO:0019901 "protein kinase binding" evidence=IDA;IPI

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0032587 "ruffle membrane" evidence=IDA

GO:0032956 "regulation of actin cytoskeleton organization" evidence=TAS

GO:0034987 "immunoglobulin receptor binding" evidence=IDA

GO:0034988 "Fc-gamma receptor I complex binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043306 "positive regulation of mast cell degranulation" evidence=IDA

GO:0043552 "positive regulation of phosphatidylinositol 3-kinase activity" evidence=ISO

GO:0045087 "innate immune response" evidence=IEA

GO:0045088 "regulation of innate immune response" evidence=IMP

GO:0045859 "regulation of protein kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0050715 "positive regulation of cytokine secretion" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0050830 "defense response to Gram-positive bacterium" evidence=IGI;IMP

UNIPROTKB|A8K4G3 HCK "cDNA FLJ78472, highly similar to Human hemopoietic cell protein-tyrosine kinase (HCK) gene" [Homo sapiens (taxid:9606)]

 Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 73/294 (24%), Positives = 131/294 (44%)

Query:    33 PTQTRPWIDPT-SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
             P +   W  P  SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P      +
Sbjct:   229 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKPGSMS-VE 280

Query:    92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPD 150
              F+ +   +  K  +   +  LH + V    I I  +F  +GS+ D +    G K PLP 
Sbjct:   281 AFLAEANVM--KTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 337

Query:   151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
             ++ +  Q+A+G++ +                        + DFG     L R + D++  
Sbjct:   338 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDNEYT 392

Query:   211 LRLGT--P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              R G   P  + APE       G  + ++D W FG  +ME++T G  P+ G S  E+  +
Sbjct:   393 AREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 449

Query:   267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQNAVY 317
             +      P  P   P  + N+++ C++     RP    +  +L  F ++  + Y
Sbjct:   450 LERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQY 502

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	632
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-36
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-35
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-33
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-32
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-31
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-31
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-30
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-29
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-27
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-26
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-25
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-25
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-24
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-23
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-22
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-21
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-20
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-20
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-18
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-18
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-18
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-17
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-17
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	5e-17
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-17
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-16
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-16
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-16
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-16
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	6e-16
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-16
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-15
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-15
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-15
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-15
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-15
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-15
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-15
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	9e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-14
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-14
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-14
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-14
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	6e-14
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	7e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	7e-14
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-14
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	8e-14
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-13
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-13
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-13
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-13
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-13
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-13
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-13
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-13
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-13
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	6e-13
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-13
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	9e-13
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	9e-13
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-12
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-12
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-12
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-12
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-12
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-12
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-12
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-12
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-12
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-12
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	5e-12
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-12
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	7e-12
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	8e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-11
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-11
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-11
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-11
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-11
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-11
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	7e-11
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	9e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-10
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-10
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-10
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-10
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-10
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-10
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-10
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-10
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-10
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-10
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-10
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-10
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-10
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-10
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-10
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-10
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-10
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	8e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-10
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	8e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	9e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-09
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-09
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-09
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-09
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-09
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-09
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-09
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-09
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-09
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-09
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-09
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-09
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-09
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-09
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	6e-09
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-09
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-09
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	7e-09
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	7e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	7e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	8e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-09
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-09
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-08
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-08
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-08
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-08
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-08
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-08
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-08
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	4e-08
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-08
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-08
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	7e-08
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-07
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-07
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-07
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-07
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-07
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-07
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-07
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-07
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-07
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-07
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-07
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-07
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-07
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-07
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	5e-07
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	5e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-07
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	7e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-06
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-06
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-06
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	5e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	6e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	6e-06
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	7e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	7e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	9e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-05
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	6e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	6e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	7e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-04
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	1e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	1e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	7e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	8e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	8e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	9e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.001
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	0.001
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.001
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.002
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	0.002
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.002
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.003
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.003
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.004
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.004
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  134 bits (341), Expect = 9e-36
 Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 42/279 (15%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           ++  ++G G FG V+LA   ++         +A+K++        K  + K  E     R
Sbjct: 2   EILEKLGEGSFGKVYLARDKKT------GKLVAIKVIK-------KKKIKKDRERI--LR 46

Query: 106 E--------SQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
           E          ++  L+ +     K+ + M++ E G + D +  ++ G+L   +   Y  
Sbjct: 47  EIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEARFYLR 104

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL-RLGT 215
           Q+   +  LHS G++  +LKP N+LL E   + L DFG     L R L   +     +GT
Sbjct: 105 QILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFG-----LARQLDPGEKLTTFVGT 159

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKP 274
           P YMAPE              D W  G  + E+LTG  P+ G   + E++    I K KP
Sbjct: 160 PEYMAPEVLL---GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFK--KIGKPKP 214

Query: 275 CIPS---GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
             P     + P  +++I      D   R    + L H F
Sbjct: 215 PFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPF 253

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  131 bits (333), Expect = 3e-35
 Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 48/258 (18%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G G FG V+LA   ++        ++A+K++           + +  E+  K     ++
Sbjct: 1   LGEGGFGTVYLARDKKTG------KKVAIKIIKKEDSSSLLEELLREIEILKKLN-HPNI 53

Query: 111 CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG 169
             L+G+      + + M++ E GS+ D + ++  GKL   +ILR  +Q+ +G+  LHS G
Sbjct: 54  VKLYGVFEDENHLYLVMEYCEGGSLKDLL-KENEGKLSEDEILRILLQILEGLEYLHSNG 112

Query: 170 LLVLNLKPSNLLLSE-HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           ++  +LKP N+LL   + ++ L DFG+  LL   +   S +   +GTP YMAPE    + 
Sbjct: 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLL---TSDKSLLKTIVGTPAYMAPEVLLGK- 168

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVI 288
            G  S ++D W  G  + E+                                 P ++++I
Sbjct: 169 -GYYSEKSDIWSLGVILYEL---------------------------------PELKDLI 194

Query: 289 IGCFEYDLRNRPLMADIL 306
               + D   RP   +IL
Sbjct: 195 RKMLQKDPEKRPSAKEIL 212

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  132 bits (332), Expect = 1e-33
 Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 31/297 (10%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---EL 100
           S ++  ++G G FG+V+LA   +          +A+K+L    E  +K  V +F    ++
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRK---------LVALKVLAKKLESKSK-EVERFLREIQI 50

Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--GKLPLPDILRYGIQL 158
                   ++  L+      G + + M++ +G   + + ++ G  G L   + L    Q+
Sbjct: 51  LASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQI 110

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYLL---LGRSLSDSDMALRLG 214
              +  LHS G++  ++KP N+LL      + L DFG+  LL      S   +  +  +G
Sbjct: 111 LSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVG 170

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW-----------FGKSVEEI 263
           TP YMAPE          S  +D W  G ++ E+LTG+ P+             K + E+
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL 230

Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA-DILHAFESSQNAVYND 319
               +     P  P  +  A  +++      D +NR   + D+ H   +      +D
Sbjct: 231 PTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESD 287

Length = 384

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  124 bits (314), Expect = 4e-32
 Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 43/281 (15%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
            +L  ++G G FG V+ A H            +AVK+L    E          ++     
Sbjct: 1   YELLRKLGSGSFGTVYKAKHK------GTGKIVAVKILKKRSEKS--------KKDQTAR 46

Query: 105 RESQS--------VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
           RE +         +  L         + + M++ E G + D ++  RGG L   +  +  
Sbjct: 47  REIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIA 104

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           +Q+ +G+  LHS G++  +LKP N+LL E+  + + DFG   L      S S +   +GT
Sbjct: 105 LQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIADFG---LAKKLLKSSSSLTTFVGT 161

Query: 216 PNYMAPEQWEPEVRG--PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           P YMAPE     + G      + D W  G  + E+LTG  P+ G+++ +     +I++  
Sbjct: 162 PWYMAPEV----LLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQ--LIRRIL 215

Query: 274 PCIPSG-------LPPAVENVIIGCFEYDLRNRPLMADILH 307
                             +++I  C   D   RP   +IL 
Sbjct: 216 GPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  122 bits (310), Expect = 1e-31
 Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 40/271 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL-------FP- 102
           IG+G FG V+L              +L V   + L     K   +   E+        P 
Sbjct: 8   IGKGSFGKVYLVRRKSDG-------KLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 103 --KFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--ILRYGIQ 157
             K+ ES    +        GK+CI M++ + G +  +I +Q+    P P+  IL + +Q
Sbjct: 61  IIKYYES----FEE-----KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ 111

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL-SDSDMAL-RLGT 215
           L   +  LHS  +L  ++KP N+ L+ +  + LGDFGI      + L S  D+A   +GT
Sbjct: 112 LCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGI-----SKVLSSTVDLAKTVVGT 166

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
           P Y++PE  +     P ++++D W  GC + E+ T   P+ G+++ E+    ++K + P 
Sbjct: 167 PYYLSPELCQ---NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALK-ILKGQYPP 222

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           IPS     + N++    + D   RP +A IL
Sbjct: 223 IPSQYSSELRNLVSSLLQKDPEERPSIAQIL 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  121 bits (307), Expect = 4e-31
 Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 41/278 (14%)

Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVK--MLLPLKEDCAKVFVNKFEELFPKFRE 106
             +GRG FG V+LA    + +       +AVK   L    E+  +    +   L      
Sbjct: 6   ELLGRGSFGSVYLALDKDTGE------LMAVKSVELSGDSEEELEALEREIRIL----SS 55

Query: 107 SQSV----CWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
            Q       +          + I +++   GS+   +  ++ GKLP P I +Y  Q+ +G
Sbjct: 56  LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL--KKFGKLPEPVIRKYTRQILEG 113

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPN 217
           ++ LHS G++  ++K +N+L+     + L DFG       + L D +         GTP 
Sbjct: 114 LAYLHSNGIVHRDIKGANILVDSDGVVKLADFG-----CAKRLGDIETGEGTGSVRGTPY 168

Query: 218 YMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHSVVIKKEK 273
           +MA     PEV          D W  GC+++EM TG  PW   G  +  +Y  +    E 
Sbjct: 169 WMA-----PEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYK-IGSSGEP 222

Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL--HAF 309
           P IP  L    ++ +  C   D + RP  AD L  H F
Sbjct: 223 PEIPEHLSEEAKDFLRKCLRRDPKKRP-TADELLQHPF 259

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  118 bits (298), Expect = 7e-30
 Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 24/273 (8%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELF 101
           L L  ++G G FG+V+               E+AVK L   KED ++  + +F     + 
Sbjct: 1   LTLGKKLGEGAFGEVYKGKLKGKGGKKKV--EVAVKTL---KEDASEQQIEEFLREARIM 55

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
            K     +V  L G+      + I M++ E G +   + ++   KL L D+L + +Q+A+
Sbjct: 56  RKLDH-PNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIAR 113

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
           G+  L S   +  +L   N L+ E+  + + DFG     L R L D D   + G      
Sbjct: 114 GMEYLESKNFIHRDLAARNCLVGENLVVKISDFG-----LSRDLYDDDYYRKRGGKLPIR 168

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           +MAPE  +    G  + ++D W FG  + E+ T G QP+ G S EE+    +    +   
Sbjct: 169 WMAPESLK---EGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLE-YLKNGYRLPQ 224

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
           P   PP + ++++ C+  D  +RP  ++++   
Sbjct: 225 PPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  116 bits (293), Expect = 3e-29
 Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 23/273 (8%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELF 101
           L L  ++G G FG+V+  T     D  +   E+AVK L   KED ++  + +F     + 
Sbjct: 1   LTLGKKLGEGAFGEVYKGTLKGKGDGKEV--EVAVKTL---KEDASEQQIEEFLREARIM 55

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
            K     ++  L G+      + I M++   G + D + + R  +L L D+L + +Q+A+
Sbjct: 56  RKLDH-PNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIAR 114

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
           G+  L S   +  +L   N L+ E+  + + DFG     L R L D D     G      
Sbjct: 115 GMEYLESKNFIHRDLAARNCLVGENLVVKISDFG-----LSRDLYDDDYYKVKGGKLPIR 169

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           +MAPE  +    G  + ++D W FG  + E+ T G +P+ G S  E+    + K  +   
Sbjct: 170 WMAPESLK---EGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLE-YLKKGYRLPK 225

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
           P   PP +  +++ C+  D  +RP  ++++   
Sbjct: 226 PPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  110 bits (277), Expect = 3e-27
 Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 14/204 (6%)

Query: 107 SQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--ILRYGIQLAKGIS 163
             ++       +   K+CI M++   G +   I++++  +  +P+  I R  IQL +G+ 
Sbjct: 58  HPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQ 117

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA-LRLGTPNYMAPE 222
            LH   +L  +LK +N+LL  +D + +GD GI  +L         MA  ++GTP+YMAPE
Sbjct: 118 ALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN------MAKTQIGTPHYMAPE 171

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
            W+     P S+++D W  GC + EM T   P+  +S++++ +  V + + P IP     
Sbjct: 172 VWK---GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYK-VQRGKYPPIPPIYSQ 227

Query: 283 AVENVIIGCFEYDLRNRPLMADIL 306
            ++N I    +   + RP    IL
Sbjct: 228 DLQNFIRSMLQVKPKLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  106 bits (268), Expect = 6e-26
 Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 25/274 (9%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE---LF 101
           L+L  ++G G FG+V+  T     +  +   ++AVK L   KE  ++    +F E   + 
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTET--KVAVKTL---KEGASEEEREEFLEEASIM 55

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
            K      V  L G+      + I  ++   G + D + ++ G KL L D+L+  +Q+AK
Sbjct: 56  KKLSHPNIVR-LLGVCTQGEPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAK 113

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT----P 216
           G+  L S   +  +L   N L++E+  + + DFG     L R + + D   + G      
Sbjct: 114 GMEYLESKNFVHRDLAARNCLVTENLVVKISDFG-----LSRDIYEDDYYRKRGGGKLPI 168

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
            +MAPE  +    G  + ++D W FG  + E+ T G QP+ G S EE+    +    +  
Sbjct: 169 KWMAPESLK---DGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEL-LEDGYRLP 224

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            P   P  +  +++ C+ YD  +RP  ++++   
Sbjct: 225 RPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  104 bits (260), Expect = 7e-25
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 18/274 (6%)

Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE-- 98
           PT+ +    +G+G FG V+L        D D   ELAVK +    +    K  VN  E  
Sbjct: 1   PTNWRRGKLLGQGAFGRVYLCY------DVDTGRELAVKQVPFDPDSPETKKEVNALECE 54

Query: 99  -ELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGI 156
            +L    +  + V +  G    +  + I M++  G SV D++     G L      +Y  
Sbjct: 55  IQLLKNLQHERIVQYY-GCLRDDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTR 111

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  LHS  ++  ++K +N+L      + LGDFG    L     S + M    GTP
Sbjct: 112 QILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTP 171

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
            +M+PE    E  G    + D W  GC+++EMLT   PW           +  +   P +
Sbjct: 172 YWMSPEVISGEGYGR---KADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQL 228

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           PS + P   N +   F  + + RP   ++L H F
Sbjct: 229 PSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  103 bits (260), Expect = 7e-25
 Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 11/181 (6%)

Query: 120 NGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS 178
             K+ + +++  G  G+  +   + G+        Y  ++   +  LHS+G++  +LKP 
Sbjct: 65  EEKLYLVLEYAPG--GELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPE 122

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDT 238
           N+LL     + L DFG+   L       +      GTP Y+APE              D 
Sbjct: 123 NILLDADGHIKLTDFGLAKELSSEGSRTNTFC---GTPEYLAPEVLL---GKGYGKAVDW 176

Query: 239 WGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRN 298
           W  G  + EMLTG  P++ +  +EIY    I K+    P  L P   ++I G  + D   
Sbjct: 177 WSLGVLLYEMLTGKPPFYAEDRKEIYEK--ILKDPLRFPEFLSPEARDLISGLLQKDPTK 234

Query: 299 R 299
           R
Sbjct: 235 R 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  102 bits (257), Expect = 2e-24
 Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN 179
           GK+ I M++ E G +   +  QRG  LP   + R+ IQ+  G++ LHS  +L  ++K  N
Sbjct: 72  GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLN 131

Query: 180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTPNYMAPEQWEPEVRGPISFETD 237
           L L  +D + +GD G+      + LSD+       +GTP Y++PE  E +   P + ++D
Sbjct: 132 LFLDAYDNVKIGDLGV-----AKLLSDNTNFANTIVGTPYYLSPELCEDK---PYNEKSD 183

Query: 238 TWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLR 297
            W  G  + E  TG  P+   +   +   ++     P +       +  +I  C   D R
Sbjct: 184 VWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP-VSQMYSQQLAQLIDQCLTKDYR 242

Query: 298 NRPLMADIL 306
            RP    +L
Sbjct: 243 QRPDTFQLL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 99.6 bits (249), Expect = 2e-23
 Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 35/275 (12%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           ++  +IG+G FG+V+ A H ++        E+A+K++  L+    K  +    ++  K +
Sbjct: 3   EILEKIGKGGFGEVYKARHKRTGK------EVAIKVI-KLESKEKKEKIINEIQILKKCK 55

Query: 106 ESQSV----CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               V     +L        ++ I M+F   GS+ D + +     L    I     +L K
Sbjct: 56  HPNIVKYYGSYLK-----KDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAYVCKELLK 109

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G+  LHS G++  ++K +N+LL+   ++ L DFG+   L      ++     +GTP +MA
Sbjct: 110 GLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT----MVGTPYWMA 165

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--VEEIYHSVVIKKEKPC--- 275
           PE        P  ++ D W  G + +E+  G +P + +   ++ ++    I    P    
Sbjct: 166 PEVIN---GKPYDYKADIWSLGITAIELAEG-KPPYSELPPMKALFK---IATNGPPGLR 218

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            P       ++ +  C + +   RP    +L H F
Sbjct: 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 96.6 bits (241), Expect = 2e-22
 Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 35/277 (12%)

Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL--FPKFRE 106
           ++IG G FG V+ A       + D    +AVK +  ++++  K      +E+      + 
Sbjct: 6   NKIGGGTFGKVYTAV------NLDTGELMAVKEI-RIQDNDPKTIKEIADEMKVLELLKH 58

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
              V + +G+ V   K+ I M++  G   + + +  G  L    I  Y +QL +G++ LH
Sbjct: 59  PNLVKY-YGVEVHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLH 116

Query: 167 SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWE 225
           S G++  ++KP+N+ L  +  + LGDFG    L   + +  +    L GTP YMAPE   
Sbjct: 117 SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV-- 174

Query: 226 PEVRGPISFET--------DTWGFGCSIMEMLTGIQPWFGKSVEE--IYHSVVIKKEKPC 275
                 I+           D W  GC ++EM TG +PW     E   ++H  V    KP 
Sbjct: 175 ------ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH--VGAGHKPP 226

Query: 276 IPS--GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           IP    L P  ++ +  C E D + RP  +++L H F
Sbjct: 227 IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 92.8 bits (231), Expect = 4e-21
 Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 28/267 (10%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVF---VNKFEELFPKFR 105
           ++G G FG V       S         +AVK L   K  D    F         L     
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKV---IPVAVKCLKSDKLSDIMDDFLKEAAIMHSL----- 53

Query: 106 ESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
           + +++  L+G+ V+   + +  +    GS+ DR+ +   G   +  +  Y +Q+A G+  
Sbjct: 54  DHENLIRLYGV-VLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRY 112

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD----MALRLGTP-NYM 219
           L S   +  +L   N+LL+  D++ +GDFG     L R+L  ++    M   L  P  + 
Sbjct: 113 LESKRFIHRDLAARNILLASDDKVKIGDFG-----LMRALPQNEDHYVMEEHLKVPFAWC 167

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           APE          S  +D W FG ++ EM T G +PW G S  +I   +  + E+   P 
Sbjct: 168 APESLR---TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPE 224

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADI 305
             P  + NV++ C+ ++  +RP  A +
Sbjct: 225 ACPQDIYNVMLQCWAHNPADRPTFAAL 251

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 91.1 bits (227), Expect = 2e-20
 Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 46/283 (16%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEY-HELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +G G FG+V+           D    E+AVK L   KED ++     F       +E++ 
Sbjct: 3   LGEGAFGEVYKGK----LKGKDGKTTEVAVKTL---KEDASEEERKDF------LKEARV 49

Query: 110 VCWLH--------GISVINGKICIAMKFYEG--------SVGDRIAQQRGGKLPLPDILR 153
           +  L         G+      + + +++ EG                     L L D+L 
Sbjct: 50  MKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           + IQ+AKG+  L S   +  +L   N L+ E   + + DFG     L R + D D   + 
Sbjct: 110 FAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFG-----LSRDVYDDDYYRKK 164

Query: 214 GT---PN-YMAPEQWEPEVRGPI-SFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
                P  +MAPE     ++  I + ++D W FG  + E+ T G  P+ G S EE+   +
Sbjct: 165 TGGKLPIRWMAPES----LKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL 220

Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
             K  +   P   P  +  +++ C++ D  +RP  ++++   E
Sbjct: 221 -RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 89.4 bits (222), Expect = 6e-20
 Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 25/267 (9%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEE---LFPKFRE 106
           +G G FG V+   +    D F      AVK +    +    +  V + E+   L  K + 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFF------AVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH 61

Query: 107 SQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
              V +L G       + I ++    GS+   +  ++ G  P P I  Y  Q+  G+  L
Sbjct: 62  PNIVQYL-GTEREEDNLYIFLELVPGGSLAKLL--KKYGSFPEPVIRLYTRQILLGLEYL 118

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQW 224
           H    +  ++K +N+L+  +  + L DFG     + + + +   A    G+P +MAPE  
Sbjct: 119 HDRNTVHRDIKGANILVDTNGVVKLADFG-----MAKQVVEFSFAKSFKGSPYWMAPEVI 173

Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIPSGLPPA 283
             +  G      D W  GC+++EM TG  PW   + V  ++  +   KE P IP  L   
Sbjct: 174 AQQ--GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK-IGRSKELPPIPDHLSDE 230

Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAF 309
            ++ I+ C + D   RP  A++L H F
Sbjct: 231 AKDFILKCLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 70/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM--LLPLKEDCAKVFVNKFEELFPK 103
           +L   IGRG FG V+   +     DF     +A+K   L  +KE+  K  + + + L  K
Sbjct: 3   QLGDLIGRGAFGVVYKGLN-LETGDF-----VAIKQISLEKIKEEALKSIMQEIDLL--K 54

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
             +  ++    G    +  + I +++ E GS+   I  ++ G  P   +  Y  Q+ +G+
Sbjct: 55  NLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQII--KKFGPFPESLVAVYVYQVLQGL 112

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + LH  G++  ++K +N+L ++   + L DFG+   L   S  D+ +    GTP +MAPE
Sbjct: 113 AYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV---GTPYWMAPE 169

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
             E       S  +D W  GC+++E+LTG  P++  +       +V     P +P G+ P
Sbjct: 170 VIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPP-LPEGISP 225

Query: 283 AVENVIIGCFEYDLRNRP 300
            +++ ++ CF+ D   RP
Sbjct: 226 ELKDFLMQCFQKDPNLRP 243

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 85.0 bits (210), Expect = 2e-18
 Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 19/261 (7%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G +G+V L  H      +     +  K+ L       +    +  +L  + +    V
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQY-----VIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIV 62

Query: 111 CWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            +       +G + I M F EG  GD   ++ +Q+G  LP   ++ + +Q+A  +  LH 
Sbjct: 63  AYRESWEGEDGLLYIVMGFCEG--GDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE 120

Query: 168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
             +L  +LK  N+ L+  + + +GD GI  +L     +  DMA  L GTP YM+PE +  
Sbjct: 121 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVL----ENQCDMASTLIGTPYYMSPELFSN 176

Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
           +   P ++++D W  GC + EM T    +  K +  + +  +I+ + P +P    P +  
Sbjct: 177 K---PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR-IIEGKLPPMPKDYSPELGE 232

Query: 287 VIIGCFEYDLRNRPLMADILH 307
           +I          RP +  IL 
Sbjct: 233 LIATMLSKRPEKRPSVKSILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 84.3 bits (208), Expect = 3e-18
 Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 32/280 (11%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF-- 97
           I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P       + V  F  
Sbjct: 3   IPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----GSMSVEAFLA 50

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
           E    K  +   +  LH + V    I I  +F   GS+ D +    G K PLP ++ +  
Sbjct: 51  EANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 109

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+A+G++ +     +  +L+ +N+L+S      + DFG     L R + D++   R G  
Sbjct: 110 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDNEYTAREGAK 164

Query: 217 NYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
               P +W  PE    G  + ++D W FG  +ME++T G  P+ G S  E+  ++     
Sbjct: 165 ---FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR 221

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAF 309
            P   +  P  + N+++ C++     RP    +  +L  F
Sbjct: 222 MPRPEN-CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 38/231 (16%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           I +G +G V+LA    + D +      A+K++    +    +  N+ +++     E   +
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIY------AIKVI----KKADMIRKNQVDQVL---TERDIL 47

Query: 111 CWLHGISVIN--------GKICIAMKFYEGSVGD--RIAQQRGGKLPLP-DILR-YGIQL 158
                  V+           + + M++  G  GD   + +  G    L  D+ R Y  ++
Sbjct: 48  SQAQSPYVVKLYYSFQGKKNLYLVMEYLPG--GDLASLLENVGS---LDEDVARIYIAEI 102

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL-LLGRSLSDSDMALR----L 213
              +  LHS G++  +LKP N+L+  +  L L DFG+  + L+ R ++ +D        +
Sbjct: 103 VLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIV 162

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
           GTP+Y+APE     +    S   D W  GC + E L GI P+ G++ EEI+
Sbjct: 163 GTPDYIAPEVI---LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF 210

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 82.5 bits (204), Expect = 2e-17
 Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 36/279 (12%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I    + L   IG G FGDV+   +       +E   +AVK     K   +     KF +
Sbjct: 3   IQREDITLGRCIGEGQFGDVYQGVYM---SPENEKIAVAVKTC---KNCTSPSVREKFLQ 56

Query: 100 ---LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
              +  +F     V  L G+   N  + I M+    G +   + Q     L L  ++ Y 
Sbjct: 57  EAYIMRQFDHPHIV-KLIGVITEN-PVWIVMELAPLGELRSYL-QVNKYSLDLASLILYS 113

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRL 213
            QL+  ++ L S   +  ++   N+L+S  D + LGDFG     L R L D     A + 
Sbjct: 114 YQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFG-----LSRYLEDESYYKASKG 168

Query: 214 GTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
             P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   
Sbjct: 169 KLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-G 219

Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
            +   E+  +P   PP + +++  C+ YD   RP   ++
Sbjct: 220 RIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 81.5 bits (201), Expect = 3e-17
 Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 33/267 (12%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYH----ELAV-KMLLPLKEDCAKVFVNKFEELFPKFR 105
           IG G FG ++LA         D  H    E+ + KM +  KE   K  +     L  K +
Sbjct: 8   IGEGSFGKIYLAK-----AKSDSEHCVIKEIDLTKMPVKEKEASKKEVI-----LLAKMK 57

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGI 162
               V +       NG++ I M++ +G  GD   RI +QRG       IL + +Q++ G+
Sbjct: 58  HPNIVTFFASFQE-NGRLFIVMEYCDG--GDLMKRINRQRGVLFSEDQILSWFVQISLGL 114

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALR--LGTPNYM 219
             +H   +L  ++K  N+ LS++  +  LGDFGI      R L+DS       +GTP Y+
Sbjct: 115 KHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGI-----ARQLNDSMELAYTCVGTPYYL 169

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           +PE  +     P + +TD W  GC + E+ T   P+ G ++ ++   +      P  P  
Sbjct: 170 SPEICQNR---PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISP-N 225

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADIL 306
               + ++I   F+   R+RP +  IL
Sbjct: 226 FSRDLRSLISQLFKVSPRDRPSITSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 81.1 bits (200), Expect = 5e-17
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 20/266 (7%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKF 104
           L+ R+G+G FG V+L    ++         L V   +P+ E      V  N+  +L  K 
Sbjct: 4   LQQRLGKGSFGTVYLVKDKKA----VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL 59

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKG 161
            +  ++   H   +     CI  ++ EG   D      +  G  L    +  + IQL  G
Sbjct: 60  -DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLG 118

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMA 220
           +  +H   +L  +LK  N+ L +++ L +GDFG+  LL+G      D+A    GTP YM+
Sbjct: 119 VHYMHQRRILHRDLKAKNIFL-KNNLLKIGDFGVSRLLMG----SCDLATTFTGTPYYMS 173

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
           PE  + +  G  S ++D W  GC + EM      + G++   +   +V +   P +P   
Sbjct: 174 PEALKHQ--GYDS-KSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPSLPETY 229

Query: 281 PPAVENVIIGCFEYDLRNRPLMADIL 306
              + +++      D   RP  A+IL
Sbjct: 230 SRQLNSIMQSMLNKDPSLRPSAAEIL 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 80.8 bits (199), Expect = 6e-17
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 21/276 (7%)

Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKFE- 98
           P + +L   +GRG FG+V+L        D D   ELAVK + P   D  +    VN  E 
Sbjct: 1   PVNWRLGKLLGRGAFGEVYLCY------DADTGRELAVKQV-PFDPDSQETSKEVNALEC 53

Query: 99  --ELFPKFRESQSVCWLHGI-SVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRY 154
             +L    R  + V +   +      K+ I +++  G S+ D++     G L      RY
Sbjct: 54  EIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRY 111

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             Q+ +G+S LHS  ++  ++K +N+L      + LGDFG    +    +S + +    G
Sbjct: 112 TRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTG 171

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           TP +M+PE    E  G    + D W   C+++EMLT   PW           +  +  KP
Sbjct: 172 TPYWMSPEVISGEGYGR---KADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP 228

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            +P G+  A  + +   F  + + RP    +L H F
Sbjct: 229 MLPDGVSDACRDFLKQIF-VEEKRRPTAEFLLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 10/189 (5%)

Query: 120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS 178
           +  + I M++  G ++ D+I +Q+G       +L Y  Q+   +S +H  G+L  ++K  
Sbjct: 71  DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTL 130

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR-LGTPNYMAPEQWEPEVRGPISFETD 237
           N+ L++   + LGDFGI  +L     S+  MA   +GTP YM+PE  +       +F++D
Sbjct: 131 NIFLTKAGLIKLGDFGISKIL----GSEYSMAETVVGTPYYMSPELCQGV---KYNFKSD 183

Query: 238 TWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLR 297
            W  GC + E+LT  + +   +   +   +V     P + S     + +++    + D  
Sbjct: 184 IWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP-VVSVYSSELISLVHSLLQQDPE 242

Query: 298 NRPLMADIL 306
            RP   ++L
Sbjct: 243 KRPTADEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 79.9 bits (198), Expect = 1e-16
 Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 49/266 (18%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IG G F  V LA       + +   E A+K+         K  + K +++     E + +
Sbjct: 9   IGEGSFSTVVLAK------EKETNKEYAIKI-------LDKRQLIKEKKVKYVKIEKEVL 55

Query: 111 CWLHGISVI---------NGKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLA 159
             L+G   I            +   +++     G+ + Q   + G L       Y  ++ 
Sbjct: 56  TRLNGHPGIIKLYYTFQDEENLYFVLEYAPN--GE-LLQYIRKYGSLDEKCTRFYAAEIL 112

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG---------IPYLLLGRSLSDSDMA 210
             +  LHS G++  +LKP N+LL +   + + DFG          P    G + +     
Sbjct: 113 LALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQI 172

Query: 211 LRL--------GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
            +         GT  Y++PE        P    +D W  GC I +MLTG  P+ G +   
Sbjct: 173 EKNRRRFASFVGTAEYVSPELLN---EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229

Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVI 288
            +    I K +   P   PP  +++I
Sbjct: 230 TFQK--ILKLEYSFPPNFPPDAKDLI 253

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 78.5 bits (194), Expect = 6e-16
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 32/217 (14%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFEELFPKFRESQ 108
           RIG G  G V+ A   ++ +       +A+K + L   E        + E    +  +  
Sbjct: 7   RIGEGAHGIVFKAKDRETGE------TVALKKVALRRLEGGIPNQALR-EIKALQACQHP 59

Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
            V  L  +        + M++    + + +  +    LP   +  Y   L KG++ +H+ 
Sbjct: 60  YVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEER-PLPEAQVKSYMRMLLKGVAYMHAN 118

Query: 169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL---RLGTPNYMAPE--- 222
           G++  +LKP+NLL+S    L + DFG     L R  S+ +  L   ++ T  Y APE   
Sbjct: 119 GIMHRDLKPANLLISADGVLKIADFG-----LARLFSEEEPRLYSHQVATRWYRAPELLY 173

Query: 223 ---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
              +++P V        D W  GC   E+L G  P F
Sbjct: 174 GARKYDPGV--------DLWAVGCIFAELLNG-SPLF 201

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 77.9 bits (192), Expect = 6e-16
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 15/186 (8%)

Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG 191
           GS+G  +  +  G+     +  +  Q+ +G++ LHS G+L  +LK  NLL+       + 
Sbjct: 93  GSIGSCL--RTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKIS 150

Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
           DFGI         +D +M+++ G+  +MAPE      +G  S + D W  GC ++EM  G
Sbjct: 151 DFGISKKSDDIYDNDQNMSMQ-GSVFWMAPEVIHSYSQG-YSAKVDIWSLGCVVLEMFAG 208

Query: 252 IQPWFGKSVEEIYHSVV---IKKEKPCIPSGLPPAVENVII----GCFEYDLRNRPLMAD 304
            +PW   S EE   ++     K+  P IP  +   +  V +     CF  +  NRP   +
Sbjct: 209 RRPW---SDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARE 265

Query: 305 IL-HAF 309
           +L H F
Sbjct: 266 LLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 77.9 bits (192), Expect = 6e-16
 Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 21/221 (9%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE--LFPKFRESQ 108
           I +G FG V+LA    + D F      A+K+L            N   E  +     ES 
Sbjct: 4   ISKGAFGSVYLAKKRSTGDYF------AIKVLKKSDMIAKNQVTNVKAERAIMMIQGESP 57

Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
            V  L+        + + M++  G     + +  GG LP     +Y  ++  G+ DLH  
Sbjct: 58  YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGG-LPEDWAKQYIAEVVLGVEDLHQR 116

Query: 169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL-LLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
           G++  ++KP NLL+ +   L L DFG+    L  +           GTP+Y+APE     
Sbjct: 117 GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV--------GTPDYLAPETILGV 168

Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
                   +D W  GC I E L G  P+  ++ + ++ +++
Sbjct: 169 ---GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL 206

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 77.6 bits (191), Expect = 6e-16
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 25/267 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           K+K +IG G FG   L    +    +    E+ +  + P + + ++  V     +    +
Sbjct: 4   KVK-KIGEGSFGKAILVKSKEDGKQY-VIKEINISKMSPKEREESRKEV----AVLSNMK 57

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGI 162
               V +       NG + I M + EG  GD   +I  QRG   P   IL + +Q+   +
Sbjct: 58  HPNIVQYQESFEE-NGNLYIVMDYCEG--GDLYKKINAQRGVLFPEDQILDWFVQICLAL 114

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYM 219
             +H   +L  ++K  N+ L++   + LGDFGI  +L      +S + L    +GTP Y+
Sbjct: 115 KHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVL------NSTVELARTCIGTPYYL 168

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           +PE  E     P + ++D W  GC + EM T    +   +++ +    +I+   P + S 
Sbjct: 169 SPEICENR---PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK-IIRGSYPPVSSH 224

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADIL 306
               + N++   F+ + R+RP +  IL
Sbjct: 225 YSYDLRNLVSQLFKRNPRDRPSVNSIL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 77.6 bits (192), Expect = 7e-16
 Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 35/279 (12%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL-AVKML-LPLKEDCAKVFVNKFEELF 101
            L+    +G+G  G V+   H           ++ A+K + +   E+  K  + + + L 
Sbjct: 2   DLERVKVLGQGSSGVVYKVRH-------KPTGKIYALKKIHVDGDEEFRKQLLRELKTLR 54

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               ES  V   +G     G+I I +++ + GS+ D + +   GK+P P +     Q+ K
Sbjct: 55  SC--ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILK 110

Query: 161 GISDLHSIGLLV-LNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTP 216
           G+  LH+   ++  ++KPSNLL++   ++ + DFGI      + L ++ +      +GT 
Sbjct: 111 GLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGI-----SKVLENT-LDQCNTFVGTV 164

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF----GKSVEEIYHSVVIKKE 272
            YM+PE+ + E     S+  D W  G +++E   G  P+         E +    +    
Sbjct: 165 TYMSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA--ICDGP 219

Query: 273 KPCIPSGL-PPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            P +P+    P   + I  C + D + RP  A++L H F
Sbjct: 220 PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 76.6 bits (188), Expect = 1e-15
 Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 25/262 (9%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L  ++G G FG+VW+ T + +        ++AVK L P      + F+ +  ++  K
Sbjct: 7   SLQLIKKLGNGQFGEVWMGTWNGNT-------KVAVKTLKP-GTMSPESFLEE-AQIMKK 57

Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R  + V  L+ + V    I I  ++  +GS+ D +    G  L LP+++    Q+A G+
Sbjct: 58  LRHDKLV-QLYAV-VSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 115

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +  +  +  +L+ +N+L+ +     + DFG     L R + D++   R G      P 
Sbjct: 116 AYIERMNYIHRDLRSANILVGDGLVCKIADFG-----LARLIEDNEYTARQGAK---FPI 167

Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W   E  + G  + ++D W FG  + E++T G  P+ G +  E+   V      PC P 
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC-PQ 226

Query: 279 GLPPAVENVIIGCFEYDLRNRP 300
             P ++  +++ C++ D   RP
Sbjct: 227 DCPISLHELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 76.4 bits (188), Expect = 1e-15
 Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 32/266 (12%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +GRG FG V L              +L +   +P+++      + K E L  +  E Q +
Sbjct: 8   VGRGAFGIVHLCRRKAD-------QKLVIIKQIPVEQ------MTKDERLAAQ-NECQVL 53

Query: 111 CWLHGISVI--------NGKICIAMKFYEGSVGDRIAQQRGGK-LPLPDILRYGIQLAKG 161
             L   ++I        +  + I M++  G       Q+R    L    IL + +Q+   
Sbjct: 54  KLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA 113

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           +  +H+  +L  +LK  N+LL +H  +V +GDFGI  +L     S S     +GTP Y++
Sbjct: 114 LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL----SSKSKAYTVVGTPCYIS 169

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
           PE  E +   P + ++D W  GC + E+ +  + +   ++  +   ++     P I    
Sbjct: 170 PELCEGK---PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP-ISDRY 225

Query: 281 PPAVENVIIGCFEYDLRNRPLMADIL 306
            P +  +I+     D   RP ++ I+
Sbjct: 226 SPDLRQLILSMLNLDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 25/262 (9%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L  ++G+G FG+VW+ T + +        ++A+K L P      + F+ +  ++  K
Sbjct: 7   SLRLDVKLGQGCFGEVWMGTWNGTT-------KVAIKTLKP-GTMMPEAFLQE-AQIMKK 57

Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R  + V  L+ + V    I I  +F  +GS+ D + +  G  L LP ++    Q+A G+
Sbjct: 58  LRHDKLVP-LYAV-VSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGM 115

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +  +  +  +L+ +N+L+ ++    + DFG     L R + D++   R G      P 
Sbjct: 116 AYIERMNYIHRDLRAANILVGDNLVCKIADFG-----LARLIEDNEYTARQGAK---FPI 167

Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W   E  + G  + ++D W FG  + E++T G  P+ G    E+   V      PC P 
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPC-PQ 226

Query: 279 GLPPAVENVIIGCFEYDLRNRP 300
           G P ++  ++  C++ D   RP
Sbjct: 227 GCPESLHELMKLCWKKDPDERP 248

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 28/268 (10%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF-- 97
           I   S+KL  ++G G FG+VW+  ++ S        ++AVK L P       + V  F  
Sbjct: 3   IPRESIKLVKKLGAGQFGEVWMGYYNNST-------KVAVKTLKP-----GTMSVQAFLE 50

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGI 156
           E    K  +   +  L+ +      I I  ++  +GS+ D +    GGK+ LP ++ +  
Sbjct: 51  EANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 110

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+A+G++ +     +  +L+ +N+L+SE     + DFG     L R + D++   R G  
Sbjct: 111 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDNEYTAREGAK 165

Query: 217 NYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
               P +W  PE    G  + ++D W FG  + E++T G  P+ G S  ++  ++     
Sbjct: 166 ---FPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR 222

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRP 300
            P      P  + +++  C++     RP
Sbjct: 223 MP-RMENCPDELYDIMKTCWKEKAEERP 249

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 19/259 (7%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G G FG   L  H  S   +      A+K +   K   A     K   L  K +    V
Sbjct: 8   VGEGSFGRALLVQHVNSDQKY------AMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIV 61

Query: 111 CWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            +       +G + I M++ +G  GD   +I  QRG   P   IL++ +Q+  G+  +H 
Sbjct: 62  AFKESFEA-DGHLYIVMEYCDG--GDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE 118

Query: 168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
             +L  ++K  N+ L+++ ++ LGDFG   LL   +   +     +GTP Y+ PE WE  
Sbjct: 119 KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLL---TSPGAYACTYVGTPYYVPPEIWE-- 173

Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
              P + ++D W  GC + E+ T   P+   S + +   V     KP +PS     + ++
Sbjct: 174 -NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP-LPSHYSYELRSL 231

Query: 288 IIGCFEYDLRNRPLMADIL 306
           I   F+ + R+RP    IL
Sbjct: 232 IKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 76.2 bits (187), Expect = 5e-15
 Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 39/273 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G FG V+LA    +   F      A+K L   K+D   V ++   E     +   S+
Sbjct: 3   LGKGSFGKVFLAELKGTNQFF------AIKAL---KKDV--VLMDDDVECTMVEKRVLSL 51

Query: 111 CWLHGISV-------INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGI 162
            W H               +   M++  G  GD +   Q   K  LP    Y  ++  G+
Sbjct: 52  AWEHPFLTHLYCTFQTKENLFFVMEYLNG--GDLMFHIQSCHKFDLPRATFYAAEIICGL 109

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
             LHS G++  +LK  N+LL     + + DFG   +     L D+      GTP+Y+APE
Sbjct: 110 QFLHSKGIVYRDLKLDNILLDTDGHIKIADFG---MCKENMLGDAKTCTFCGTPDYIAPE 166

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
               +         D W FG  + EML G  P+ G   EE++ S  I+ + PC P  L  
Sbjct: 167 ILLGQKYN---TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS--IRMDNPCYPRWLTR 221

Query: 283 AVENVIIGCF----------EYDLRNRPLMADI 305
             +++++  F          + D+R  P   +I
Sbjct: 222 EAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 74.7 bits (184), Expect = 8e-15
 Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 30/270 (11%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +G G  G V    H  +         +AVK + L + E   K  + + + L     +  S
Sbjct: 9   LGAGNSGVVSKVLHRPTG------KIMAVKTIRLEINEAIQKQILRELDIL----HKCNS 58

Query: 110 --VCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
             +   +G    NG I I M++ +G   D+I ++  G++P   + +  + + KG++ LH 
Sbjct: 59  PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE 118

Query: 168 -IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
              ++  ++KPSN+L++   Q+ L DFG+   L+  SL+ +     +GT +YMAPE+ + 
Sbjct: 119 KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN-SLAKTF----VGTSSYMAPERIQG 173

Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFG-----KSVEEIYHSVVIKKEKPCIPSG-L 280
                 S   D W  G S++E+ TG  P+         + E+   +V  +  P +PSG  
Sbjct: 174 NDYSVKS---DIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKF 229

Query: 281 PPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            P  ++ +  C   D R RP   ++L H F
Sbjct: 230 SPDFQDFVNLCLIKDPRERPSYKELLEHPF 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 74.3 bits (182), Expect = 9e-15
 Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 26/271 (9%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 7   SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 57

Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R  + V  L+ + V    I I  ++  +GS+ D +  + G  L LP ++    Q+A G+
Sbjct: 58  LRHEKLV-QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 115

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +  +  +  +L+ +N+L+ E+    + DFG     L R + D++   R G      P 
Sbjct: 116 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPI 167

Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P 
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 226

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
             P ++ +++  C+  +   RP   + L AF
Sbjct: 227 ECPESLHDLMCQCWRKEPEERPTF-EYLQAF 256

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 25/200 (12%)

Query: 120 NGKICIAMKFYEGSVGD-----RIAQQRGGKLPLPDILRYGIQLAKGISDLH---SIGLL 171
           N  + I M++ EG  GD     +  ++    +    I R   QL   + + H     G  
Sbjct: 73  NQTLYIVMEYCEG--GDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT 130

Query: 172 VL--NLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTPNYMAPEQWEPE 227
           VL  +LKP+N+ L  ++ + LGDFG     L + L       +  +GTP YM+PEQ    
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFG-----LAKILGHDSSFAKTYVGTPYYMSPEQLN-- 183

Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-PCIPSGLPPAVEN 286
                  ++D W  GC I E+     P+  ++  ++  +  IK+ K   IP      +  
Sbjct: 184 -HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQL--ASKIKEGKFRRIPYRYSSELNE 240

Query: 287 VIIGCFEYDLRNRPLMADIL 306
           VI      D   RP   ++L
Sbjct: 241 VIKSMLNVDPDKRPSTEELL 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 31/230 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE--------LFP 102
           IG+G FG V LA        +      AVK+L        K+ +N+ E+        +  
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCY------AVKVLQ------KKIVLNRKEQKHIMAERNVLL 50

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKG 161
           K  +   +  LH       K+   + F  G  G+     QR    P P    Y  ++A  
Sbjct: 51  KNVKHPFLVGLHYSFQTTEKLYFVLDFVNG--GELFFHLQRERSFPEPRARFYAAEIASA 108

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMA 220
           +  LHSI ++  +LKP N+LL     +VL DFG    L    ++ SD      GTP Y+A
Sbjct: 109 LGYLHSINIVYRDLKPENILLDSQGHVVLTDFG----LCKEGIAQSDTTTTFCGTPEYLA 164

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
           PE    +   P     D W  G  + EML G+ P++ + V E+Y +++ K
Sbjct: 165 PEVIRKQ---PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 72.9 bits (179), Expect = 3e-14
 Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 36/270 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML--------LPLKEDCAKVFVNKFEELFP 102
           +G+G +G V+      +A D      +A+K +         PL E+ A         L  
Sbjct: 16  LGKGTYGIVY------AARDLSTQVRIAIKEIPERDSRYVQPLHEEIA---------LHS 60

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPD----ILRYGIQL 158
             +    V +L   S  NG   I M+   G     + + + G  PL D    I+ Y  Q+
Sbjct: 61  YLKHRNIVQYLGSDSE-NGFFKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIIFYTKQI 117

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPN 217
            +G+  LH   ++  ++K  N+L++ +  +V + DFG    L G +          GT  
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT---GTLQ 174

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCI 276
           YMAPE  +   RG      D W  GC+I+EM TG  P+      +     V + K  P I
Sbjct: 175 YMAPEVIDKGPRG-YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEI 233

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           P  L    +N I+ CFE D   R    D+L
Sbjct: 234 PESLSAEAKNFILRCFEPDPDKRASAHDLL 263

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 73.5 bits (180), Expect = 4e-14
 Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 19/237 (8%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IG+G FG V LA  H++ + F     L  K +L  KE+  K  +++   L    +    V
Sbjct: 3   IGKGSFGKVLLA-RHKAEEKFYAVKVLQKKAILKKKEE--KHIMSERNVLLKNVKHPFLV 59

Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
             LH       K+   + +  G  G+     QR      P    Y  ++A  +  LHS+ 
Sbjct: 60  -GLHFSFQTADKLYFVLDYING--GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 116

Query: 170 LLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVR 229
           ++  +LKP N+LL     +VL DFG+    +  + + S      GTP Y+APE    +  
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC---GTPEYLAPEVLHKQ-- 171

Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
            P     D W  G  + EML G+ P++ ++  E+Y +++ K      P  L P + N
Sbjct: 172 -PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITN 221

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 72.4 bits (178), Expect = 5e-14
 Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 41/287 (14%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--------LKEDC 89
           W I   SLKL+ ++G G FG+VW+ T + +        ++AVK L P        L+E  
Sbjct: 1   WEIPRESLKLERKLGAGQFGEVWMGTWNGTT-------KVAVKTLKPGTMSPEAFLQE-- 51

Query: 90  AKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPL 148
                    ++  K R  + V  L+ +      I I  ++   GS+ D +    G KL L
Sbjct: 52  --------AQIMKKLRHDKLV-QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRL 102

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD 208
           P ++    Q+A+G++ L S   +  +L   N+L+ E+    + DFG     L R + D +
Sbjct: 103 PQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFG-----LARLIEDDE 157

Query: 209 MALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
              R G      P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+ 
Sbjct: 158 YTAREGAK---FPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVL 214

Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
             V      P  P   P  + ++++ C++ D   RP    +    E 
Sbjct: 215 EQVERGYRMPR-PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 18/185 (9%)

Query: 122 KICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS 178
            +C+ M    G  GD    I        P    + Y  Q+  G+  LH   ++  +LKP 
Sbjct: 67  DLCLVMTLMNG--GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPE 124

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDT 238
           N+LL +H  + + D G+   L G          R GTP YMAPE  + EV     F  D 
Sbjct: 125 NVLLDDHGNVRISDLGLAVELKGGKKIKG----RAGTPGYMAPEVLQGEV---YDFSVDW 177

Query: 239 WGFGCSIMEMLTGIQPW--FGKSV--EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
           +  GC++ EM+ G  P+    + V  EE+    +    +   P    P  +++     + 
Sbjct: 178 FALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVE--YPDKFSPEAKDLCEALLQK 235

Query: 295 DLRNR 299
           D   R
Sbjct: 236 DPEKR 240

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 72.1 bits (177), Expect = 6e-14
 Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 38/285 (13%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W ID TS++L  ++G G FG+VW    + +         +AVK L P   D  K F+ + 
Sbjct: 1   WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTT-------PVAVKTLKPGTMD-PKDFLAEA 52

Query: 98  EEL----FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
           + +     PK  +  +VC L     I   +   MK+  GS+ + +    G  L LP ++ 
Sbjct: 53  QIMKKLRHPKLIQLYAVCTLEEPIYI---VTELMKY--GSLLEYLQGGAGRALKLPQLID 107

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
              Q+A G++ L +   +  +L   N+L+ E++   + DFG     L R + +     R 
Sbjct: 108 MAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFG-----LARVIKEDIYEARE 162

Query: 214 GTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI 269
           G      P +W  PE       S ++D W FG  + E++T G  P+ G +  E+   V  
Sbjct: 163 GAK---FPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ 219

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
               PC P G P  + ++++ C++ D  +RP        FE+ Q 
Sbjct: 220 GYRMPC-PPGCPKELYDIMLDCWKEDPDDRP-------TFETLQW 256

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 72.5 bits (178), Expect = 7e-14
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 11/182 (6%)

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
           D+  Y  +LA  +  LHS+G++  +LKP N+LL E   + L DFG    L   S+     
Sbjct: 99  DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG----LSKESIDHEKK 154

Query: 210 ALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
           A    GT  YMAPE      R   +   D W FG  + EMLTG  P+ GK  +E     +
Sbjct: 155 AYSFCGTVEYMAPEVVN---RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMT--M 209

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSR 328
           I K K  +P  L P  ++++   F+ +  NR L A      E  ++  ++  +W  L  R
Sbjct: 210 ILKAKLGMPQFLSPEAQSLLRALFKRNPANR-LGAGPDGVEEIKRHPFFSTIDWNKLYRR 268

Query: 329 AL 330
            +
Sbjct: 269 EI 270

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 72.5 bits (178), Expect = 7e-14
 Identities = 68/254 (26%), Positives = 109/254 (42%), Gaps = 23/254 (9%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---LKEDCAKVFVNKFEELFPKFRES 107
           IG+G FG V LA H      +      AVK+L     LK+   K  + +   L    +  
Sbjct: 3   IGKGSFGKVLLAKHKADGKFY------AVKVLQKKAILKKKEQKHIMAERNVLLKNVKHP 56

Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLH 166
             V  LH       K+   + +  G  G+     QR    P P    Y  ++A  +  LH
Sbjct: 57  FLVG-LHYSFQTADKLYFVLDYVNG--GELFFHLQRERSFPEPRARFYAAEIASALGYLH 113

Query: 167 SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
           S+ ++  +LKP N+LL     +VL DFG+    +  S + S      GTP Y+APE    
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC---GTPEYLAPEVLRK 170

Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-IPSGLPPAVE 285
           +   P     D W  G  + EML G+ P++ +   E+Y +++    KP  +   +  +  
Sbjct: 171 Q---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL---NKPLRLKPNISVSAR 224

Query: 286 NVIIGCFEYDLRNR 299
           +++ G  + D   R
Sbjct: 225 HLLEGLLQKDRTKR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 71.6 bits (176), Expect = 7e-14
 Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 19/216 (8%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +L  RIG G +GDV+ A    + +       +A+K++  L+       + +   +  + R
Sbjct: 6   ELIQRIGSGTYGDVYKARDIATGE------LVAIKVI-KLEPGDDFEIIQQEISMLKECR 58

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
               V +  G  +   K+ I M++  G S+ D I Q   G L    I     +  KG++ 
Sbjct: 59  HPNIVAY-FGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGPLSELQIAYVCRETLKGLAY 116

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMAP 221
           LH  G +  ++K +N+LL+E   + L DFG+   L       + +A R   +GTP +MAP
Sbjct: 117 LHETGKIHRDIKGANILLTEDGDVKLADFGVSAQL------TATIAKRKSFIGTPYWMAP 170

Query: 222 EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG 257
           E    E +G    + D W  G + +E+     P F 
Sbjct: 171 EVAAVERKGGYDGKCDIWALGITAIELAELQPPMFD 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 71.9 bits (176), Expect = 8e-14
 Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 21/177 (11%)

Query: 80  KMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIA 139
           KM L  KE   KV       L   F     +C +  +S++NG     +K++  +VG    
Sbjct: 38  KMALLEKEILEKVNSPFIVNLAYAFESKTHLCLV--MSLMNGG---DLKYHIYNVG---- 88

Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL 199
            +RG  L +  ++ Y  Q+  GI  LHS+ ++  ++KP N+LL +     L D G+   L
Sbjct: 89  -ERG--LEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVEL 145

Query: 200 L-GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
             G++++      R GT  YMAPE  + E   P S+  D +  GCSI EM+ G  P+
Sbjct: 146 KDGKTITQ-----RAGTNGYMAPEILKEE---PYSYPVDWFAMGCSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 73.1 bits (179), Expect = 1e-13
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 24/197 (12%)

Query: 122 KICIAMKFYEGSVGD---RIAQQRGGKLPLPD----ILRYGIQLAKGISDLHSIGLLVLN 174
           K+ + M++  GS GD   +I Q+    LP  +    +L Y I LA  + ++HS  ++  +
Sbjct: 139 KLLLIMEY--GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLA--LDEVHSRKMMHRD 194

Query: 175 LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS---DMALRL-GTPNYMAPEQWEPEVRG 230
           LK +N+ L     + LGDFG       +  SDS   D+A    GTP Y+APE WE   R 
Sbjct: 195 LKSANIFLMPTGIIKLGDFG-----FSKQYSDSVSLDVASSFCGTPYYLAPELWE---RK 246

Query: 231 PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIG 290
             S + D W  G  + E+LT  +P+ G S  EI   V+  K  P  P  +   ++ ++  
Sbjct: 247 RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF-PCPVSSGMKALLDP 305

Query: 291 CFEYDLRNRPLMADILH 307
               +   RP    +LH
Sbjct: 306 LLSKNPALRPTTQQLLH 322

Length = 478

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 45/255 (17%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL----FPKFRE 106
           IGRG FG+V +     +   +      A+K+L            NK+E L       FRE
Sbjct: 9   IGRGAFGEVAVVKMKNTGQVY------AMKIL------------NKWEMLKRAETACFRE 50

Query: 107 SQSVC------W---LHGISVINGKICIAMKFYEGSVGDRIA--QQRGGKLPLPDILRYG 155
            + V       W   LH        + + M +Y G  GD +    +   +LP  D+ R+ 
Sbjct: 51  ERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG--GDLLTLLSKFEDRLP-EDMARFY 107

Query: 156 I-QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
           + ++   I  +H +G +  ++KP N+LL ++  + L DFG    LL      S++A+  G
Sbjct: 108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAV--G 165

Query: 215 TPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           TP+Y++PE  Q   + +G    E D W  G  + EML G  P++ +S+ E Y  ++  KE
Sbjct: 166 TPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE 225

Query: 273 KPCIPSGLPPAVENV 287
                   PP V +V
Sbjct: 226 H----FQFPPDVTDV 236

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 17/167 (10%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           +  ++   +  LHS G++  ++KP N+LL E   + + DF I   +   +L+ S      
Sbjct: 105 WICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS----TS 160

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---VEEIYHSVVIK 270
           GTP YMAPE    +     S   D W  G +  E L G +P+ G S    ++I       
Sbjct: 161 GTPGYMAPEVLCRQGY---SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETA 217

Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVY 317
                 P+       + I    E D + R     +    +  +N  Y
Sbjct: 218 DVL--YPATWSTEAIDAINKLLERDPQKR-----LGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 72.4 bits (177), Expect = 2e-13
 Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 10/228 (4%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V L  H  S   +    +L  K  +  + D A  +    E     F  S  V
Sbjct: 51  IGRGAFGEVQLVRHKSSQKVYA--MKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 105

Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGL 170
             L      +  + + M++  G  GD +       +P      Y  ++   +  +HS+GL
Sbjct: 106 VQLFCAFQDDKYLYMVMEYMPG--GDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 163

Query: 171 LVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-VR 229
           +  ++KP N+LL +H  L L DFG    +    +   D A  +GTP+Y++PE  + +   
Sbjct: 164 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTA--VGTPDYISPEVLKSQGGD 221

Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           G    E D W  G  + EML G  P++  S+   Y  ++  K     P
Sbjct: 222 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFP 269

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 36/268 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG +G V+   H  +         +A+K++     D     + +   L  + R+SQ  
Sbjct: 9   IGRGAYGAVYRGKHVPTG------RVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 111 -------CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                   +L G  +      I M++ EG  G      + G +    I     ++   + 
Sbjct: 63  NITKYYGSYLKGPRL-----WIIMEYAEG--GSVRTLMKAGPIAEKYISVIIREVLVALK 115

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +H +G++  ++K +N+L++    + L DFG+  LL   S   S      GTP +MAPE 
Sbjct: 116 YIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFV---GTPYWMAPEV 172

Query: 224 WEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV--VIKKEKPCIP-S 278
               +     ++T  D W  G +I EM TG  P+   S  + + ++  + K + P +  +
Sbjct: 173 ----ITEGKYYDTKADIWSLGITIYEMATGNPPY---SDVDAFRAMMLIPKSKPPRLEDN 225

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADIL 306
           G    +   +  C + + + R L A+ L
Sbjct: 226 GYSKLLREFVAACLDEEPKER-LSAEEL 252

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 30/273 (10%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKM--LLPLKEDCAKVFVNKFEE---LFPKFR 105
           +G+G +G V+    +Q          +AVK   L       A+    K +E   L    +
Sbjct: 8   LGKGAYGTVYCGLTNQG-------QLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK 60

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ--QRGGKLPLPDILRYGIQLAKGIS 163
               V +L G  + +  I I M+F  G     I+    R G LP P   +Y  Q+  G++
Sbjct: 61  HVNIVQYL-GTCLDDNTISIFMEFVPGG---SISSILNRFGPLPEPVFCKYTKQILDGVA 116

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL--LGRSLSDSDMALRL-GTPNYMA 220
            LH+  ++  ++K +N++L  +  + L DFG    L  +G   + S+M   + GTP +MA
Sbjct: 117 YLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA 176

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK---PCIP 277
           PE       G  S   D W  GC++ EM TG  P    S++ +     I   +   P +P
Sbjct: 177 PEVINESGYGRKS---DIWSIGCTVFEMATGKPPL--ASMDRLAAMFYIGAHRGLMPRLP 231

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                A  + +  C   D   RP    +L H F
Sbjct: 232 DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 70.8 bits (173), Expect = 3e-13
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 10/147 (6%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  ++A  I  LHS+ ++  +LKP N+LL     +VL DFG    L    +   +     
Sbjct: 101 YAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFG----LCKEGVEPEETTSTF 156

Query: 214 -GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE    E   P     D W  G  + EML G+ P++ + V ++Y +++ K  
Sbjct: 157 CGTPEYLAPEVLRKE---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL 213

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +  +P G   A  ++++G    D R R
Sbjct: 214 Q--LPGGKTVAACDLLVGLLHKDQRRR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 69.9 bits (172), Expect = 4e-13
 Identities = 71/266 (26%), Positives = 111/266 (41%), Gaps = 51/266 (19%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE--------L-- 100
           +G G FG V L  H  S   +      A+K+L       AK+   K  E        L  
Sbjct: 9   LGTGSFGRVMLVRHKGSGKYY------ALKIL-----SKAKIVKLKQVEHVLNEKRILQS 57

Query: 101 --FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQ 157
              P F     +  L+G    +  + + M++  G  G+  +  ++ G+ P P    Y  Q
Sbjct: 58  IRHP-F-----LVNLYGSFQDDSNLYLVMEYVPG--GELFSHLRKSGRFPEPVARFYAAQ 109

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR--SLSDSDMALRLGT 215
           +   +  LHS+ ++  +LKP NLLL     + + DFG    + GR  +L         GT
Sbjct: 110 VVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC--------GT 161

Query: 216 PNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           P Y+APE    +   +       D W  G  I EML G  P+F  +  +IY  ++  K +
Sbjct: 162 PEYLAPEIILSKGYGKA-----VDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVR 216

Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNR 299
              PS   P  +++I    + DL  R
Sbjct: 217 --FPSFFSPDAKDLIRNLLQVDLTKR 240

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 69.7 bits (170), Expect = 4e-13
 Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 23/277 (8%)

Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFE- 98
           P + +    +G+G FG V+L        D D   ELA K +   P   + +K  V+  E 
Sbjct: 1   PINWRRGKLLGQGAFGRVYLCY------DVDTGRELAAKQVQFDPESPETSKE-VSALEC 53

Query: 99  --ELFPKFRESQSVCWLHGISVINGK--ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILR 153
             +L    +  + V + +G      +  + I M++  G SV D++     G L      +
Sbjct: 54  EIQLLKNLQHERIVQY-YGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY--GALTESVTRK 110

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  Q+ +G+S LHS  ++  ++K +N+L      + LGDFG    L    +S + +    
Sbjct: 111 YTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVT 170

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           GTP +M+PE    E  G    + D W  GC+++EMLT   PW           +  +   
Sbjct: 171 GTPYWMSPEVISGEGYGR---KADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN 227

Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           P +PS +     +  +GC   + R+RP   ++L H F
Sbjct: 228 PQLPSHISEHARD-FLGCIFVEARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 69.1 bits (169), Expect = 5e-13
 Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 28/274 (10%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           +LKL  ++G G FG+VW+         ++ + ++A+K    LK+          E    K
Sbjct: 7   TLKLVKKLGAGQFGEVWMGY-------YNGHTKVAIK---SLKQGSMSPEAFLAEANLMK 56

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
             +   +  L+ + V    I I  ++ E GS+ D +    G KL +  ++    Q+A+G+
Sbjct: 57  QLQHPRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGM 115

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +     +  +L+ +N+L+SE     + DFG     L R + D++   R G      P 
Sbjct: 116 AFIERKNYIHRDLRAANILVSETLCCKIADFG-----LARLIEDNEYTAREGAK---FPI 167

Query: 223 QW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++      P  P 
Sbjct: 168 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPR-PD 226

Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAF 309
             P  +  ++  C++     RP    +  +L  F
Sbjct: 227 NCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 69.3 bits (170), Expect = 6e-13
 Identities = 79/299 (26%), Positives = 124/299 (41%), Gaps = 46/299 (15%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
            D   L+    IG G  G V+     ++       H +AVK +   +        NK EE
Sbjct: 12  ADLNDLENLGEIGSGTCGQVYKMRFKKTG------HVMAVKQMR--RTG------NK-EE 56

Query: 100 LFPKFRESQSVCWLH---------GISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPD 150
                 +   V   H         G  + +  + I M+    +  D++ ++  G +P  D
Sbjct: 57  NKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM-STCLDKLLKRIQGPIP-ED 114

Query: 151 ILRYGIQLAKGISDLHSI----GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD 206
           IL  G      +  LH +    G++  ++KPSN+LL     + L DFGI     GR L D
Sbjct: 115 IL--GKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGIS----GR-LVD 167

Query: 207 SDMALR-LGTPNYMAPEQWEPEVRGP-ISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
           S    R  G   YMAPE+ +P    P      D W  G S++E+ TG  P+     E   
Sbjct: 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV 227

Query: 265 HSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF----ESSQNAV 316
            + ++++E P +P   G  P   + +  C   D R RP   ++L H F    E+++  V
Sbjct: 228 LTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEVDV 286

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 68.9 bits (168), Expect = 6e-13
 Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 19/221 (8%)

Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFE- 98
           PT+ +L   +G+G FG V+L        D D   ELAVK +   P   + +K  VN  E 
Sbjct: 1   PTNWRLGKLLGQGAFGRVYLCY------DADTGRELAVKQVQFDPESPETSKE-VNALEC 53

Query: 99  --ELFPKFRESQSVCWLHGI-SVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRY 154
             +L       + V +   +   +   + I M+    GS+ D++     G L      +Y
Sbjct: 54  EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKY 111

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             Q+ +G+S LHS  ++  ++K +N+L      + LGDFG    L    LS + M    G
Sbjct: 112 TRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTG 171

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
           TP +M+PE    E  G    + D W  GC+++EMLT   PW
Sbjct: 172 TPYWMSPEVISGEGYGR---KADIWSVGCTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 69.1 bits (169), Expect = 6e-13
 Identities = 73/281 (25%), Positives = 115/281 (40%), Gaps = 37/281 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G G FG+V+  T             +AVK L     D  K    K   L   F     V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGK--------LPLPDILRYGIQLAKGI 162
             L G+ ++N    I M+  EG  GD ++  R  +        L L ++L   + +AKG 
Sbjct: 63  KLL-GVCLLNEPQYIIMELMEG--GDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC 119

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQ-----LVLGDFGIPYLLLGRSLSDSDMALRLGTP- 216
             L  +  +  +L   N L+SE        + +GDFG     L R +  SD   + G   
Sbjct: 120 VYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG-----LARDIYKSDYYRKEGEGL 174

Query: 217 ---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI--K 270
               +MAPE     + G  + ++D W FG  + E+LT G QP+   + +E+   V    +
Sbjct: 175 LPVRWMAPESL---LDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR 231

Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHA 308
            +K   P   P  +  ++  C+  D   RP    + +IL  
Sbjct: 232 LQK---PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 68.9 bits (169), Expect = 9e-13
 Identities = 61/296 (20%), Positives = 120/296 (40%), Gaps = 45/296 (15%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV-----FV 94
           +    + L   +G+G FG V+           +    +A+K +     + A +     F+
Sbjct: 3   LPREKITLIRELGQGSFGMVYEGLAKGVVKG-EPETRVAIKTV----NENASMRERIEFL 57

Query: 95  NKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQR--------GGK 145
           N  E    K      V  L G+        + M+   +G +   +  +R         G 
Sbjct: 58  N--EASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGP 115

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
             L   ++   ++A G++ L +   +  +L   N +++E   + +GDFG     + R + 
Sbjct: 116 PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG-----MTRDIY 170

Query: 206 DSD---------MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPW 255
           ++D         + +R     +MAPE  +    G  + ++D W FG  + EM T   QP+
Sbjct: 171 ETDYYRKGGKGLLPVR-----WMAPESLKD---GVFTTKSDVWSFGVVLWEMATLAEQPY 222

Query: 256 FGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            G S EE+    VI      +P   P  +  ++  C++Y+ + RP   +I+ + + 
Sbjct: 223 QGLSNEEVL-KFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 68.9 bits (168), Expect = 9e-13
 Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 29/277 (10%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
           LK  +G G FG V+LA  H    + D+   +AVK L    E   + F  + E L     +
Sbjct: 9   LKWELGEGAFGKVFLAECHNLLPEQDKML-VAVKALKEASESARQDFQREAELL--TVLQ 65

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GKLPLPDIL 152
            Q +   +G+      + +  ++      +R  +  G              G+L L  +L
Sbjct: 66  HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQML 125

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
               Q+A G+  L S+  +  +L   N L+ +   + +GDFG     + R +  +D   R
Sbjct: 126 AIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIYSTDY-YR 179

Query: 213 LGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV 268
           +G    M P +W P    +    + E+D W FG  + E+ T G QPW+  S  E    + 
Sbjct: 180 VGG-RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
             +E    P   PP V  ++ GC++ + + R ++ DI
Sbjct: 239 QGRELE-RPRTCPPEVYAIMQGCWQREPQQRMVIKDI 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 69.3 bits (169), Expect = 1e-12
 Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 37/252 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK----FRE 106
           IGRG FG+V +     +   F      A+K+L            NK+E L       FRE
Sbjct: 9   IGRGAFGEVAVVKLKNADKVF------AMKIL------------NKWEMLKRAETACFRE 50

Query: 107 SQSVC------W---LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGI 156
            + V       W   LH        + + M +Y G     +  +   +LP  D+ R Y  
Sbjct: 51  ERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLP-EDMARFYLA 109

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           ++   I  +H +  +  ++KP N+L+  +  + L DFG    L+      S +A+  GTP
Sbjct: 110 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV--GTP 167

Query: 217 NYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           +Y++PE  Q   + +G    E D W  G  + EML G  P++ +S+ E Y  ++  KE+ 
Sbjct: 168 DYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 227

Query: 275 CIPSGLPPAVEN 286
             P+ +    E+
Sbjct: 228 QFPAQVTDVSED 239

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 11/135 (8%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  ++   +  LHS  ++  +LKP N+LL +   + L DFG       + L D    L  
Sbjct: 106 YASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFG-----FAKKLRDRTWTL-C 159

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           GTP Y+APE  + +         D W  G  I EML G  P+F  +   IY  ++  K +
Sbjct: 160 GTPEYLAPEVIQSKGHNK---AVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE 216

Query: 274 PCIPSGLPPAVENVI 288
              P  L    +++I
Sbjct: 217 --FPRHLDLYAKDLI 229

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 68.7 bits (168), Expect = 1e-12
 Identities = 77/296 (26%), Positives = 120/296 (40%), Gaps = 41/296 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKEDCAKVFVNKFEELFPKFRE 106
           I  G +G V+L  H ++   F      A+K +    L L+    +VFV   E     F E
Sbjct: 9   ISNGAYGAVYLVRHKETRQRF------AMKKINKQNLILRNQIQQVFV---ERDILTFAE 59

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDL 165
           +  V  +         +C+ M++ EG  GD     +  G LP+     Y  +    +  L
Sbjct: 60  NPFVVSMFCSFETKRHLCMVMEYVEG--GDCATLLKNIGALPVDMARMYFAETVLALEYL 117

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL---------------GRSLSDSDMA 210
           H+ G++  +LKP NLL++    + L DFG+  + L                R   D  + 
Sbjct: 118 HNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC 177

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
              GTP Y+APE     +R       D W  G  + E L G  P+FG + EE++  V+  
Sbjct: 178 ---GTPEYIAPEVI---LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD 231

Query: 271 K-EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGL 325
             E P     LP   +++I      +   R        AFE  Q+  +   +W GL
Sbjct: 232 DIEWPEGDEALPADAQDLISRLLRQNPLERLGTGG---AFEVKQHRFFLGLDWNGL 284

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 32/227 (14%)

Query: 43  TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-------MLLPLKEDCAKVFVN 95
            + +++ +IGRG F +V+ AT         +   +A+K       M    ++DC K    
Sbjct: 2   ANFQIEKKIGRGQFSEVYRATCLL------DRKPVALKKVQIFEMMDAKARQDCVKEI-- 53

Query: 96  KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--IL 152
              +L  +      + +L    + + ++ I ++  + G +   I   +  K  +P+  + 
Sbjct: 54  ---DLLKQLNHPNVIKYLDSF-IEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVW 109

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y +QL   +  +HS  ++  ++KP+N+ ++    + LGD G     LGR  S    A  
Sbjct: 110 KYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-----LGRFFSSKTTAAH 164

Query: 213 --LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG 257
             +GTP YM+PE+         +F++D W  GC + EM     P++G
Sbjct: 165 SLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYG 208

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 68.0 bits (166), Expect = 1e-12
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 20/167 (11%)

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFG----IPYLLLGRSLS 205
           I+ Y  QL +G+S LH   ++  ++K +NLL+    Q + + DFG    +     G    
Sbjct: 105 IINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEF 164

Query: 206 DSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
              +   LGT  +MAPE     +RG       D W  GC I+EM T   PW  +      
Sbjct: 165 QGQL---LGTIAFMAPEV----LRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-- 215

Query: 265 HSVVIKK-----EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           H  +I K       P IP  L P + +V + C E    +RP   ++L
Sbjct: 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 28/273 (10%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPL----KEDCAKVFVNKFE---ELFP 102
           IG G FG V+L  +  S +       +AVK + LP      +D  +  ++       L  
Sbjct: 8   IGSGSFGSVYLGMNASSGE------LMAVKQVELPSVSASSKDRKRSMLDALAREIALLK 61

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           + +    V +L G S+    + I +++  G SV   +     G      +  +  Q+ KG
Sbjct: 62  ELQHENIVQYL-GSSLDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKG 118

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           ++ LH+ G++  ++K +N+L+     + + DFGI   L   SLS          P+    
Sbjct: 119 LNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLS---TKTNGARPSLQGS 175

Query: 222 EQW-EPEVRGPISF--ETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIP 277
             W  PEV    S+  + D W  GC ++EMLTG  P+     ++ I+   + +   P IP
Sbjct: 176 VFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK--IGENASPEIP 233

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           S +     + +   FE D   RP  A++L H F
Sbjct: 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 54/239 (22%)

Query: 49  HRIGRGPFGDVW----LATHH-------QSADDFDEYHELA---VKMLLPLKEDCAKVFV 94
             +G G +G V      AT         + ++D ++  + A   VK+L  L+    +  V
Sbjct: 7   GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH---ENIV 63

Query: 95  NKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY 154
           N    L   FR               G++ +  ++ E ++ + +    GG LP   +  Y
Sbjct: 64  N----LKEAFRRK-------------GRLYLVFEYVERTLLELLEASPGG-LPPDAVRSY 105

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             QL + I+  HS  ++  ++KP N+L+SE   L L DFG    L  R    S +   + 
Sbjct: 106 IWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR--PASPLTDYVA 163

Query: 215 TPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS-VEEIYH 265
           T  Y APE       +   V        D W  GC + E+L G +P F G S ++++Y 
Sbjct: 164 TRWYRAPELLVGDTNYGKPV--------DVWAIGCIMAELLDG-EPLFPGDSDIDQLYL 213

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 33/283 (11%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           ++ LK  +G G FG V+L   +   +  ++   +AVK L     + A+    +  EL   
Sbjct: 6   TIVLKRELGEGAFGKVFLGECY-HLEPENDKELVAVKTLKETASNDARKDFEREAELLTN 64

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGD------------RIAQQRG---GKLPL 148
           F + +++   +G+        +  ++ E   GD               +      G+L L
Sbjct: 65  F-QHENIVKFYGVCTEGDPPIMVFEYMEH--GDLNKFLRSHGPDAAFLKSPDSPMGELTL 121

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDS 207
             +L+  +Q+A G+  L S   +  +L   N L+  +D +V +GDFG     + R +  +
Sbjct: 122 SQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG-YDLVVKIGDFG-----MSRDVYTT 175

Query: 208 DMALRLGTPNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           D   R+G  + M P +W  PE  +    + E+D W FG  + E+ T G QPW+G S EE+
Sbjct: 176 DY-YRVGG-HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV 233

Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
              +   +     P   P  V ++++GC++ D + R  + DI 
Sbjct: 234 IECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRINIKDIH 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 67.4 bits (165), Expect = 4e-12
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 23/235 (9%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML---LPLKEDCAKVFVNKFEELFPKFRES 107
           +G+G FG V LA    + + +      AVK+L   + L++D  +  + + + +     + 
Sbjct: 3   LGKGSFGKVLLAELKGTDELY------AVKVLKKDVILQDDDVECTMTE-KRVLALAGKH 55

Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLH 166
             +  LH       ++   M++  G  GD +   QR G+   P    Y  ++  G+  LH
Sbjct: 56  PFLTQLHSCFQTKDRLFFVMEYVNG--GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLH 113

Query: 167 SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWE 225
             G++  +LK  N+LL     + + DFG    +    +          GTP+Y+APE   
Sbjct: 114 ERGIIYRDLKLDNVLLDSEGHIKIADFG----MCKEGILGGVTTSTFCGTPDYIAPEILS 169

Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
            +   P     D W  G  + EML G  P+ G   +E++ S  I +++   P  L
Sbjct: 170 YQ---PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS--ILEDEVRYPRWL 219

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 67.3 bits (164), Expect = 5e-12
 Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 20/207 (9%)

Query: 127 MKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH 185
           M+F  G  GD +   Q  G+  L     Y  ++  G+  LHS G++  +LK  N++L   
Sbjct: 75  MEFLNG--GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD 132

Query: 186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSI 245
             + + DFG   +       D+  +   GTP+Y+APE  +       +F  D W FG  +
Sbjct: 133 GHIKIADFG---MCKENVFGDNRASTFCGTPDYIAPEILQGL---KYTFSVDWWSFGVLL 186

Query: 246 MEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR-PLMAD 304
            EML G  P+ G   +E++ S  I+ + P  P  +    ++++   FE D   R  ++ +
Sbjct: 187 YEMLIGQSPFHGDDEDELFES--IRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGN 244

Query: 305 I-LHAFESSQNAVYNDGEWTGLGSRAL 330
           I  H F  + N       WT L  R L
Sbjct: 245 IRGHPFFKTIN-------WTALEKREL 264

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 66.4 bits (162), Expect = 5e-12
 Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 34/285 (11%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPK 103
           ++ +  +G G  G V+ A H  +         LAVK++ L +  +  K  +++ E L+  
Sbjct: 3   IQYQEILGHGNGGTVYKAYHLLTR------RILAVKVIPLDITVELQKQIMSELEILYKC 56

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
             +S  +   +G   +  +I I  +F +G   D        K+P   + R  + + KG++
Sbjct: 57  --DSPYIIGFYGAFFVENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLT 109

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            L S+ +L  ++KPSN+L++   Q+ L DFG+        L +S     +GT  YMAPE+
Sbjct: 110 YLWSLKILHRDVKPSNMLVNTRGQVKLCDFGV-----STQLVNSIAKTYVGTNAYMAPER 164

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF------GKSVEEIYHSVVIKKEKPCIP 277
              E  G  S   D W  G S ME+  G  P+       G  +       ++ ++ P +P
Sbjct: 165 ISGEQYGIHS---DVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP 221

Query: 278 SGL-PPAVENVIIGCFEYDLRNRPLMADIL-HAFESSQNAVYNDG 320
            G       + I  C     + RP   +++ H F       YNDG
Sbjct: 222 VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI----VQYNDG 262

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 66.9 bits (163), Expect = 6e-12
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 10/160 (6%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
           QR G+  L     Y  +L   + +LH   ++  +LKP N+LL     + L DFG+  L  
Sbjct: 85  QREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKL-- 142

Query: 201 GRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS 259
             ++ D D      GTP Y+APE              D W  G  + EMLTG+ P++ ++
Sbjct: 143 --NMKDDDKTNTFCGTPEYLAPELLLGHGYTKA---VDWWTLGVLLYEMLTGLPPFYDEN 197

Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           V E+Y  ++  +E    P G     ++++IG    D   R
Sbjct: 198 VNEMYRKIL--QEPLRFPDGFDRDAKDLLIGLLSRDPTRR 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 66.3 bits (162), Expect = 6e-12
 Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 36/289 (12%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
           LK   ++G G FG V L  +    D+  E  ++AVK L        +   + FE      
Sbjct: 6   LKFIKQLGEGHFGKVELCRYDPLGDNTGE--QVAVKSL---NHSGEEQHRSDFEREIEIL 60

Query: 105 R--ESQSVCWLHGISVINGK--ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           R  + +++    G+    G   + + M++   GS+ D + + R  ++ L  +L +  Q+ 
Sbjct: 61  RTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQIC 119

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           KG+  L S   +  +L   N+L+   D + + DFG     L + L +      +  P   
Sbjct: 120 KGMDYLGSQRYIHRDLAARNILVESEDLVKISDFG-----LAKVLPEDKDYYYVKEPG-E 173

Query: 220 APEQW-EPEV--RGPISFETDTWGFGCSIMEMLTGIQP----------WFGKSVEEIYHS 266
           +P  W  PE       S  +D W FG ++ E+ T   P            G +  ++  +
Sbjct: 174 SPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVT 233

Query: 267 VVIKKEK-----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            +++  K     P  P   P  V +++  C+E + ++RP  AD++   +
Sbjct: 234 RLLELLKEGERLPR-PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 66.2 bits (161), Expect = 7e-12
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
           D L   IQ+A G+  L S   +  +L   N+L+ E   + + D G     L R +  +D 
Sbjct: 125 DFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG-----LSREIYSADY 179

Query: 210 ALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
             R+  P  + P +W P    + G  S ++D W FG  + E+ + G+QP++G S +E+  
Sbjct: 180 -YRV-QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE 237

Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
            V  ++  PC     PP + +++  C++     RP   DI
Sbjct: 238 MVRKRQLLPC-SEDCPPRMYSLMTECWQEGPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 66.4 bits (162), Expect = 8e-12
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 13/175 (7%)

Query: 127 MKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH 185
           M++  G  GD +   Q  G+        Y  ++  G+  LH  G++  +LK  N+LL + 
Sbjct: 75  MEYLNG--GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD 132

Query: 186 DQLVLGDFGIPYL-LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS 244
             + + DFG+    + G   + +      GTP+Y+APE  + +     +   D W FG  
Sbjct: 133 GHIKIADFGMCKENMNGEGKAST----FCGTPDYIAPEILKGQK---YNESVDWWSFGVL 185

Query: 245 IMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           + EML G  P+ G+  +E++ S  I  ++P  P  +    ++ +   FE D   R
Sbjct: 186 LYEMLIGQSPFHGEDEDELFDS--ILNDRPHFPRWISKEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 66.0 bits (161), Expect = 8e-12
 Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 25/194 (12%)

Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDIL-RYGIQLAKGISDLHSIGLLV-LNLKPS 178
             IC+ M+F +    DRI + +GG +P  +IL +  + + +G++ L+++  ++  ++KPS
Sbjct: 76  NNICMCMEFMDCGSLDRIYK-KGGPIP-VEILGKIAVAVVEGLTYLYNVHRIMHRDIKPS 133

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDT 238
           N+L++   Q+ L DFG+   L+  S++D+     +GT  YM+PE+ +    G  + ++D 
Sbjct: 134 NILVNSRGQIKLCDFGVSGELIN-SIADT----FVGTSTYMSPERIQG---GKYTVKSDV 185

Query: 239 WGFGCSIMEMLTGIQPWFGK-----------SVEEIYHSVVIKKEKPCIPSG-LPPAVEN 286
           W  G SI+E+  G  P+               + ++   +V ++  P +PS   P  + +
Sbjct: 186 WSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-QEPPPRLPSSDFPEDLRD 244

Query: 287 VIIGCFEYDLRNRP 300
            +  C   D   RP
Sbjct: 245 FVDACLLKDPTERP 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 65.6 bits (161), Expect = 1e-11
 Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 26/141 (18%)

Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
           +      K     I  Y  QL +G+  LHS G+L  ++K SN+L++    L L DFG   
Sbjct: 89  LLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFG--- 145

Query: 198 LLLGRSLSDS---DMALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEM 248
             L R  +     D   R+ T  Y  PE      ++ PEV        D W  GC + E+
Sbjct: 146 --LARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEV--------DMWSVGCILAEL 195

Query: 249 LTGIQPWFGKS----VEEIYH 265
             G   + G +    +E+I+ 
Sbjct: 196 FLGKPIFQGSTELEQLEKIFE 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 20/184 (10%)

Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL 198
            +++   +P   I +Y +QL   +  +HS  ++  ++KP+N+ ++    + LGD G    
Sbjct: 96  FKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLG---- 151

Query: 199 LLGRSLSDSDMAL--RLGTPNYMAPEQWEPEVRGP-ISFETDTWGFGCSIMEMLTGIQPW 255
            LGR  S    A    +GTP YM+PE+    +     +F++D W  GC + EM     P+
Sbjct: 152 -LGRFFSSKTTAAHSLVGTPYYMSPER----IHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Query: 256 FGKSVEEIYHSVVIKKEKPCIPSGLPP-----AVENVIIGCFEYDLRNRPLMADILHAFE 310
           +G   +++    + KK + C    LP       + +++  C   D   RP ++ +L   +
Sbjct: 207 YG---DKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263

Query: 311 SSQN 314
               
Sbjct: 264 EMHA 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 23/155 (14%)

Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN 179
            G + +  +F +  +   I  ++ G LP   I  Y  QL +G++  HS G+L  +LKP N
Sbjct: 70  KGDLYLVFEFMDTDLYKLIKDRQRG-LPESLIKSYLYQLLQGLAFCHSHGILHRDLKPEN 128

Query: 180 LLLSEHDQLVLGDFGIPYLLLGRSL-SDSDMAL-RLGTPNYMAPE------QWEPEVRGP 231
           LL++    L L DFG     L RS  S        + T  Y APE       +   V   
Sbjct: 129 LLINTEGVLKLADFG-----LARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPV--- 180

Query: 232 ISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYH 265
                D W  GC   E+L+    + GKS +++++ 
Sbjct: 181 -----DIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 41/287 (14%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-------MLLPLKEDCAKVFVNK 96
           + +++ +IGRG F +V+ AT         +   +A+K       M    + DC K  ++ 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATC------LLDGVPVALKKVQIFDLMDAKARADCIKE-IDL 55

Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--ILR 153
            ++L        +V   +   + + ++ I ++  + G +   I   +  K  +P+  + +
Sbjct: 56  LKQL-----NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWK 110

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR- 212
           Y +QL   +  +HS  ++  ++KP+N+ ++    + LGD G     LGR  S    A   
Sbjct: 111 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-----LGRFFSSKTTAAHS 165

Query: 213 -LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
            +GTP YM+PE+         +F++D W  GC + EM     P++G  +    +S+  K 
Sbjct: 166 LVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKI 220

Query: 272 EK---PCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
           E+   P +PS      +  ++  C   D   RP   DI + ++ ++ 
Sbjct: 221 EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP---DITYVYDVAKR 264

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 11/112 (9%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  ++ + +  LH +G +  +LKP N L+     + L DFG+   ++  + S       +
Sbjct: 106 YMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS------VV 159

Query: 214 GTPNYMAPEQWEPEVRGP-ISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
           G+P+YMAPE     +RG    F  D W  GC + E L G  P+ G +  E +
Sbjct: 160 GSPDYMAPEV----LRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW 207

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 64.4 bits (158), Expect = 2e-11
 Identities = 59/237 (24%), Positives = 91/237 (38%), Gaps = 62/237 (26%)

Query: 48  KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK--FR 105
             ++G G +G V+ A   ++         +A+K +    E          EE  P    R
Sbjct: 4   LEKLGEGTYGVVYKARDKKTG------EIVALKKIRLDNE----------EEGIPSTALR 47

Query: 106 ESQSVCWLHGIS---------VI--NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY 154
           E   +  L  +          VI    K+ +  ++ +  +   +  +R G L    I   
Sbjct: 48  E---ISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYL-DKRPGPLSPNLIKSI 103

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             QL +G++  HS  +L  +LKP N+L++    L L DFG     L R+     + LR  
Sbjct: 104 MYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFG-----LARAFG---IPLRTY 155

Query: 215 TPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
           T       Y APE       +   V        D W  GC   EM+TG +P F G S
Sbjct: 156 THEVVTLWYRAPEILLGSKHYSTAV--------DIWSVGCIFAEMITG-KPLFPGDS 203

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 25/278 (8%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE-LAVKMLLPLKEDCAKVFVNKFE 98
           ++ T + +KH++G G +G+V+          + +Y   +AVK L   KED  +V     E
Sbjct: 3   MERTDITMKHKLGGGQYGEVYEGV-------WKKYSLTVAVKTL---KEDTMEVEEFLKE 52

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQ 157
               K  +  ++  L G+        I  +F   G++ D + +    ++    +L    Q
Sbjct: 53  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 112

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           ++  +  L     +  +L   N L+ E+  + + DFG+  L+ G + +    A       
Sbjct: 113 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA------- 165

Query: 218 YMAPEQWE-PE--VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK 273
              P +W  PE       S ++D W FG  + E+ T G+ P+ G  + ++Y  ++ K  +
Sbjct: 166 -KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKGYR 223

Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
              P G PP V  ++  C++++  +RP  A+I  AFE+
Sbjct: 224 MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 19/221 (8%)

Query: 114 HGISVINGKICIAMKFYEGSVGDRI--AQQRGGKLPLPDILRYGIQLAKGISDL---HSI 168
           +G   I G + + M++ +    D++         +P   + R    + KG+  L   H+I
Sbjct: 65  YGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNI 124

Query: 169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE--- 225
             +  ++KP+N+L++ + Q+ L DFG+   L+  SL+ ++    +G  +YMAPE+ +   
Sbjct: 125 --IHRDVKPTNVLVNGNGQVKLCDFGVSGNLV-ASLAKTN----IGCQSYMAPERIKSGG 177

Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH--SVVIKKEKPCIPSGLPPA 283
           P      + ++D W  G SI+EM  G  P+  ++   I+   S ++  + P +PSG    
Sbjct: 178 PNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDD 237

Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAF-ESSQNAVYNDGEW 322
            ++ +  C       RP  A +L H +    +NA  +  EW
Sbjct: 238 AQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNADVDMAEW 278

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 64.0 bits (156), Expect = 7e-11
 Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 36/241 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL---------- 100
           IGRG FG+V L  H  S   +      A+K+L            +KFE +          
Sbjct: 51  IGRGAFGEVQLVRHKSSKQVY------AMKLL------------SKFEMIKRSDSAFFWE 92

Query: 101 ---FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
                    S+ +  LH     +  + + M++  G  GD +       +P      Y  +
Sbjct: 93  ERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPG--GDLVNLMSNYDIPEKWARFYTAE 150

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           +   +  +HS+G +  ++KP N+LL +   L L DFG    +    +   D A  +GTP+
Sbjct: 151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTA--VGTPD 208

Query: 218 YMAPEQWEPE-VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
           Y++PE  + +   G    E D W  G  + EML G  P++  S+   Y  ++  K     
Sbjct: 209 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTF 268

Query: 277 P 277
           P
Sbjct: 269 P 269

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 63.1 bits (153), Expect = 9e-11
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 9/109 (8%)

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
            L Y  ++  G+ DLH    +  +LKP N+LL ++  + + D G     L   + + +  
Sbjct: 104 ALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLG-----LAVKIPEGESI 158

Query: 211 L-RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
             R+GT  YMAPE    +         D WG GC I EM+ G  P+ G+
Sbjct: 159 RGRVGTVGYMAPEVLNNQRYT---LSPDYWGLGCLIYEMIEGQSPFRGR 204

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 47/237 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHEL-AVKML---LPLKEDCAKVFVNKFEELF 101
           K+  ++G G FG V+LA + ++        EL A+K +       E+C  +         
Sbjct: 2   KVIKQLGDGTFGSVYLARNKET-------GELVAIKKMKKKFYSWEECMNL--------- 45

Query: 102 PKFRESQS---------VCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDIL 152
              RE +S         +  L  +   N ++    ++ EG++   +  ++G       I 
Sbjct: 46  ---REVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIR 102

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL-SDSDMAL 211
               Q+ +G++ +H  G    +LKP NLL+S  + + + DFG     L R + S      
Sbjct: 103 SIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFG-----LAREIRSRPPYTD 157

Query: 212 RLGTPNYMAPEQW--EPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS-VEEIY 264
            + T  Y APE          P+    D W  GC + E+ T  +P F G S ++++Y
Sbjct: 158 YVSTRWYRAPEILLRSTSYSSPV----DIWALGCIMAELYTL-RPLFPGSSEIDQLY 209

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKEDCAKVFVNKFEELFPKFRE 106
           +G+G FG V LA   +  D+       A+K+L    +   +D     V K         +
Sbjct: 8   LGKGSFGKVMLA-ERKGTDEL-----YAIKILKKDVVIQDDDVECTMVEKRVLALSG--K 59

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDL 165
              +  LH       ++   M++  G  GD + Q Q+ G+   P  + Y  ++A G+  L
Sbjct: 60  PPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFL 117

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           HS G++  +LK  N++L     + + DFG+    +   ++        GTP+Y+APE   
Sbjct: 118 HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFC---GTPDYIAPEIIA 174

Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
            +   P     D W FG  + EML G  P+ G+  +E++ S++
Sbjct: 175 YQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 62.2 bits (151), Expect = 1e-10
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL-R 212
           Y  ++  G+ DLH   ++  +LKP N+LL ++  + + D G     L   + + +    R
Sbjct: 107 YAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLG-----LAVEIPEGETIRGR 161

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
           +GT  YMAPE  + E     +F  D WG GC I EM+ G  P+
Sbjct: 162 VGTVGYMAPEVVKNE---RYTFSPDWWGLGCLIYEMIEGKSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 63.7 bits (155), Expect = 1e-10
 Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 5/145 (3%)

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           IQ+   +  +HS  ++  ++K +N+LL  +  + LGDFG   +    ++SD       GT
Sbjct: 150 IQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMY-AATVSDDVGRTFCGT 208

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
           P Y+APE W    R P S + D +  G  + E+LT  +P+ G+++EE+ H  +  +  P 
Sbjct: 209 PYYVAPEIWR---RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP- 264

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRP 300
           +P  + P ++ ++      D + RP
Sbjct: 265 LPPSISPEMQEIVTALLSSDPKRRP 289

Length = 496

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 37/244 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK----FRE 106
           IGRG FG                  E+AV  +   +   A   +NK+E L       FRE
Sbjct: 9   IGRGAFG------------------EVAVVKMKHTERIYAMKILNKWEMLKRAETACFRE 50

Query: 107 SQSV-----C-W---LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI- 156
            ++V     C W   LH        + + M +Y G     +  +   +LP  D+ R+ I 
Sbjct: 51  ERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLP-EDMARFYIA 109

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           ++   I  +H +  +  ++KP N+LL  +  + L DFG    +       S +A+  GTP
Sbjct: 110 EMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAV--GTP 167

Query: 217 NYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           +Y++PE  Q   +  G    E D W  G  + EML G  P++ +S+ E Y  ++  +E+ 
Sbjct: 168 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 227

Query: 275 CIPS 278
             PS
Sbjct: 228 QFPS 231

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 23/133 (17%)

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQ 223
           LH+ G++  +LKP NLLL  +  + L DFG       + L          GTP Y+APE 
Sbjct: 109 LHNRGIIYRDLKPENLLLDSNGYVKLVDFG-----FAKKLKSGQKTWTFCGTPEYVAPEI 163

Query: 224 WEPEVRGPI-----SFETDTWGFGCSIMEMLTGIQPWFGKSVE---EIYHSVVIKKEKPC 275
                   I      F  D W  G  + E+LTG  P FG+  E   EIY+ ++    K  
Sbjct: 164 --------ILNKGYDFSVDYWSLGILLYELLTGRPP-FGEDDEDPMEIYNDILKGNGKLE 214

Query: 276 IPSGLPPAVENVI 288
            P+ +  A +++I
Sbjct: 215 FPNYIDKAAKDLI 227

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 62.4 bits (151), Expect = 2e-10
 Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 26/259 (10%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAV--KMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
           IGRG +  V L    ++    D+ + + V  K L+   ED   V   K   +F +   + 
Sbjct: 3   IGRGSYAKVLLVRLKKN----DQIYAMKVVKKELVHDDEDIDWVQTEK--HVFEQASSNP 56

Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHS 167
            +  LH       ++ + +++  G  GD +   QR  KLP      Y  ++   ++ LH 
Sbjct: 57  FLVGLHSCFQTTSRLFLVIEYVNG--GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHE 114

Query: 168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
            G++  +LK  N+LL     + L D+G+    LG   + S      GTPNY+APE    E
Sbjct: 115 RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC---GTPNYIAPEILRGE 171

Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWF------GKSVEEIYHSVVIKKEKPC-IPSGL 280
             G   F  D W  G  + EM+ G  P+         + E+    V++  EKP  IP  L
Sbjct: 172 EYG---FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL--EKPIRIPRFL 226

Query: 281 PPAVENVIIGCFEYDLRNR 299
                +V+ G    D + R
Sbjct: 227 SVKASHVLKGFLNKDPKER 245

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 39/139 (28%), Positives = 80/139 (57%), Gaps = 16/139 (11%)

Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS---DLHSIGLLVLNLK 176
           +G+I I M+  +G   D++ + + G++P   + +  I + +G++   + H I  +  ++K
Sbjct: 71  DGEISICMEHMDGGSLDQVLK-KAGRIPENILGKISIAVLRGLTYLREKHKI--MHRDVK 127

Query: 177 PSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP-ISFE 235
           PSN+L++   ++ L DFG+   L+  S+++S     +GT +YM+PE+    ++G   + +
Sbjct: 128 PSNILVNSRGEIKLCDFGVSGQLID-SMANS----FVGTRSYMSPER----LQGTHYTVQ 178

Query: 236 TDTWGFGCSIMEMLTGIQP 254
           +D W  G S++EM  G  P
Sbjct: 179 SDIWSLGLSLVEMAIGRYP 197

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 62.7 bits (152), Expect = 2e-10
 Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 10/228 (4%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V L  H  +   +    +L  K  +  + D A  +    E     F  S  V
Sbjct: 51  IGRGAFGEVQLVRHKSTRKVYA--MKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 105

Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGL 170
             L      +  + + M++  G  GD +       +P      Y  ++   +  +HS+G 
Sbjct: 106 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 163

Query: 171 LVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-VR 229
           +  ++KP N+LL +   L L DFG    +    +   D A  +GTP+Y++PE  + +   
Sbjct: 164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGGD 221

Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           G    E D W  G  + EML G  P++  S+   Y  ++  K     P
Sbjct: 222 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 269

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 61.9 bits (150), Expect = 3e-10
 Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 10/147 (6%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS  ++  ++K  NL+L +   + + DFG    L    +SD + M   
Sbjct: 100 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 155

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++++ 
Sbjct: 156 CGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 212

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 213 R--FPRTLSPEAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 61.6 bits (149), Expect = 3e-10
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 22/172 (12%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
           Q+ GK   P  + Y  +++ G+  LH  G++  +LK  N++L     + + DFG    + 
Sbjct: 93  QQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFG----MC 148

Query: 201 GRSLSDSDMALRL--GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
              + D  +  R   GTP+Y+APE    +   P     D W +G  + EML G  P+ G+
Sbjct: 149 KEHMVDG-VTTRTFCGTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPFDGE 204

Query: 259 SVEEIYHSVV---------IKKEKPCIPSGLPPAVENVIIGC---FEYDLRN 298
             +E++ S++         + KE   I  GL     +  +GC    E D+R 
Sbjct: 205 DEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIRE 256

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 61.5 bits (150), Expect = 4e-10
 Identities = 65/285 (22%), Positives = 105/285 (36%), Gaps = 67/285 (23%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
            IGRG FG+VWL     +   +      A+K+L   K D   +            R+  +
Sbjct: 8   VIGRGAFGEVWLVRDKDTGQVY------AMKVLR--KSD---MIKRNQIAHVRAERDILA 56

Query: 110 VC---WLHGISVINGKIC---------IAMKFYEGSVGDRI-AQQRGGKLPLPDILR-YG 155
                W      I              + M++  G  GD +    R    P  +  R Y 
Sbjct: 57  DADSPW------IVKLYYSFQDEEHLYLVMEYMPG--GDLMNLLIRKDVFP-EETARFYI 107

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI---------PYLLLGRSLSD 206
            +L   +  +H +G +  ++KP N+L+     + L DFG+             L  S + 
Sbjct: 108 AELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNL 167

Query: 207 SDMALRL-----------------GTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEM 248
                 L                 GTP+Y+APE     +RG P   E D W  G  + EM
Sbjct: 168 LFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV----LRGTPYGLECDWWSLGVILYEM 223

Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGC 291
           L G  P++  +++E Y+ ++  KE    P    + P   ++I   
Sbjct: 224 LYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRL 268

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 60.4 bits (147), Expect = 4e-10
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR-----LG 214
           KG+  LHS G +  ++K  N+LL E   + + DFG+   L        D   +     +G
Sbjct: 113 KGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASL----ADGGDRTRKVRKTFVG 168

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
           TP +MAPE  E +V G   F+ D W FG + +E+ TG  P+
Sbjct: 169 TPCWMAPEVME-QVHG-YDFKADIWSFGITAIELATGAAPY 207

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 60.5 bits (147), Expect = 5e-10
 Identities = 48/188 (25%), Positives = 96/188 (51%), Gaps = 18/188 (9%)

Query: 128 KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHD 186
           KFY      +    +G  +P   + +  + + K +  LHS + ++  ++KPSN+L++ + 
Sbjct: 88  KFY------KKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG 141

Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP-ISFETDTWGFGCSI 245
           Q+ L DFGI   L+  S++ +  A   G   YMAPE+  PE+       ++D W  G ++
Sbjct: 142 QVKLCDFGISGYLVD-SVAKTIDA---GCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197

Query: 246 MEMLTGIQPW--FGKSVEEIYHSVVIKKEKPCIPSG-LPPAVENVIIGCFEYDLRNRPLM 302
           +E+ TG  P+  +    +++    V+++  P +P+    P  ++ +  C + + + RP  
Sbjct: 198 IELATGRFPYDSWKTPFQQLKQ--VVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNY 255

Query: 303 ADIL-HAF 309
            ++L H F
Sbjct: 256 PELLQHPF 263

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 60.5 bits (147), Expect = 6e-10
 Identities = 64/242 (26%), Positives = 92/242 (38%), Gaps = 58/242 (23%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-----------CAK-VFVNKFE 98
           +GRG FG V LA + ++ + +      A+K L   K D           C K +F     
Sbjct: 7   LGRGHFGKVLLAEYKKTGELY------AIKAL--KKGDIIARDEVESLMCEKRIFETANS 58

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
           E  P F  +     L         +C  M++  G  GD +          P  + Y   +
Sbjct: 59  ERHP-FLVN-----LFACFQTEDHVCFVMEYAAG--GDLMMHIHTDVFSEPRAVFYAACV 110

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR------ 212
             G+  LH   ++  +LK  NLLL     + + DFG         L    M         
Sbjct: 111 VLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFG---------LCKEGMGFGDRTSTF 161

Query: 213 LGTPNYMAPEQWEPEVRGPISFET------DTWGFGCSIMEMLTGIQPWFGKSVEEIYHS 266
            GTP ++APE         +  ET      D WG G  I EML G  P+ G   EE++ S
Sbjct: 162 CGTPEFLAPE---------VLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS 212

Query: 267 VV 268
           +V
Sbjct: 213 IV 214

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 60.2 bits (146), Expect = 7e-10
 Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 30/240 (12%)

Query: 24  DHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
             L+ VV       P     +     +IG G  G V +AT   +        ++AVK + 
Sbjct: 6   AALQLVV---DPGDPRSYLDNFV---KIGEGSTGIVCIATDKSTG------RQVAVKKMD 53

Query: 84  PLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQR 142
             K+   ++  N  E +  +  +  ++  ++   ++  ++ + M+F EG ++ D +   R
Sbjct: 54  LRKQQRRELLFN--EVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTR 111

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
              +    I    + + K +S LH+ G++  ++K  ++LL+   ++ L DFG        
Sbjct: 112 ---MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFG-----FCA 163

Query: 203 SLSDSDMALR---LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS 259
            +S  ++  R   +GTP +MAPE      R P   E D W  G  ++EM+ G  P+F + 
Sbjct: 164 QVSK-EVPRRKSLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 60.0 bits (145), Expect = 7e-10
 Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 41/289 (14%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
           LK  +G G FG V+LA  +  +   D+   +AVK L        K F  +  EL    + 
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKML-VAVKALKDPTLAARKDF-QREAELLTNLQH 66

Query: 107 SQSVCWLHGISVINGKICIAMKFYE-GSVG--------------DRIAQQRGGKLPLPDI 151
              V + +G+      + +  ++ + G +               D   +Q  G+L L  +
Sbjct: 67  EHIVKF-YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 125

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
           L    Q+A G+  L S   +  +L   N L+  +  + +GDFG     + R +  +D   
Sbjct: 126 LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG-----MSRDVYSTDY-Y 179

Query: 212 RLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS----VEEI 263
           R+G  + M P +W P    +    + E+D W FG  + E+ T G QPWF  S    +E I
Sbjct: 180 RVGG-HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238

Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI---LHAF 309
               V+++ + C     P  V ++++GC++ + + R  + +I   LHA 
Sbjct: 239 TQGRVLERPRVC-----PKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 61.8 bits (150), Expect = 7e-10
 Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 38/230 (16%)

Query: 75  HELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC-WLHGISVI---------NGKIC 124
           HE+A+K+L   + D  +      E    +FR   ++C  L+  +++          G + 
Sbjct: 4   HEVAIKLL---RTDAPEE-----EHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLF 55

Query: 125 IAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS 183
              ++  G ++ + +A    G LP  +  R  +Q+   ++  H+ G++  +LKP N+++S
Sbjct: 56  AVFEYVPGRTLREVLAAD--GALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVS 113

Query: 184 EHD----QLVLGDFGIPYLLLGRSLSDSDMALR----LGTPNYMAPEQWEPEVRGPISFE 235
           +        VL DFGI  LL G   +D     R    LGTP Y APEQ   E   P++  
Sbjct: 114 QTGVRPHAKVL-DFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGE---PVTPN 169

Query: 236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE 285
           +D + +G   +E LTG +   G SV EI +    ++  P +   LPP + 
Sbjct: 170 SDLYAWGLIFLECLTGQRVVQGASVAEILY----QQLSP-VDVSLPPWIA 214

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 60.0 bits (145), Expect = 8e-10
 Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)

Query: 45  LKLKHRIGRGPFGDVWLATHH-------QSADDFDEYHEL-AVKMLLPLKEDCAKVFVNK 96
           L+LK ++G G FG+V L           + A +FD    L AVKML     D  K   N 
Sbjct: 7   LRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRA---DVTKTARND 63

Query: 97  F-EELFPKFR-ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQR--------GGKL 146
           F +E+    R ++ ++  L G+ V +  +C+  ++ E    ++   QR           +
Sbjct: 64  FLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123

Query: 147 P---LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS 203
           P   + ++L   +Q+A G+  L S+  +  +L   N L+  H  + + DFG     + R+
Sbjct: 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFG-----MSRN 178

Query: 204 LSDSD---MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEM--LTGIQPWFG 257
           L   D   +  R   P  +MA   WE  + G  +  +D W FG ++ EM  L   QP+  
Sbjct: 179 LYSGDYYRIQGRAVLPIRWMA---WESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235

Query: 258 KSVEEIYHSV----------VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
            S E++  +           +   + P  PS     V  +++ C+  D+++RP   + +H
Sbjct: 236 LSDEQVIENTGEFFRNQGRQIYLSQTPLCPS----PVFKLMMRCWSRDIKDRPTF-NKIH 290

Query: 308 AF 309
            F
Sbjct: 291 HF 292

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 30/271 (11%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
           +IG+G FGDV+      +        E+AVK     +         KF    E+  ++  
Sbjct: 2   KIGKGNFGDVYKGVLKGNT-------EVAVKT---CRSTLPPDLKRKFLQEAEILKQYDH 51

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISD 164
              V  L G+ V    I I M+   G  G  +   R    +L +  +L+  +  A G+  
Sbjct: 52  PNIV-KLIGVCVQKQPIYIVMELVPG--GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEY 108

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           L S   +  +L   N L+ E++ L + DFG     + R        +  G      P +W
Sbjct: 109 LESKNCIHRDLAARNCLVGENNVLKISDFG-----MSREEEGGIYTVSDGLKQ--IPIKW 161

Query: 225 -EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
             PE    G  + E+D W +G  + E  + G  P+ G S ++    +      P  P   
Sbjct: 162 TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPA-PQLC 220

Query: 281 PPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           P  +  +++ C+ YD  NRP  ++I +  + 
Sbjct: 221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 60.6 bits (147), Expect = 8e-10
 Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 26/268 (9%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           RIG G  G V+   H  +   +      A+K++    ED  +  + +  E+  +     +
Sbjct: 81  RIGSGAGGTVYKVIHRPTGRLY------ALKVIYGNHEDTVRRQICREIEIL-RDVNHPN 133

Query: 110 VCWLHGISVINGKICIAMKFYEGSV--GDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           V   H +   NG+I + ++F +G    G  IA ++     L D+ R   Q+  GI+ LH 
Sbjct: 134 VVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQF----LADVAR---QILSGIAYLHR 186

Query: 168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
             ++  ++KPSNLL++    + + DFG+   +L +++   + +  +GT  YM+PE+   +
Sbjct: 187 RHIVHRDIKPSNLLINSAKNVKIADFGVSR-ILAQTMDPCNSS--VGTIAYMSPERINTD 243

Query: 228 VRGPI--SFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV---VIKKEKPCIPSGLPP 282
           +       +  D W  G SI+E   G  P FG   +  + S+   +   + P  P+    
Sbjct: 244 LNHGAYDGYAGDIWSLGVSILEFYLGRFP-FGVGRQGDWASLMCAICMSQPPEAPATASR 302

Query: 283 AVENVIIGCFEYDLRNRPLMADIL-HAF 309
              + I  C + +   R     +L H F
Sbjct: 303 EFRHFISCCLQREPAKRWSAMQLLQHPF 330

Length = 353

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 59.2 bits (143), Expect = 9e-10
 Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 39/280 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML---LPLKEDCAKVFVNK 96
           I P+ L L   IG G FG VWL         + E  ++A+K +      +ED    F+ +
Sbjct: 1   IHPSELTLVQEIGSGQFGLVWLGY-------WLEKRKVAIKTIREGAMSEED----FIEE 49

Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
            + +  K    + V  L+G+      IC+  +F E G + D +  QR GK     +L   
Sbjct: 50  AQVMM-KLSHPKLV-QLYGVCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMC 106

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           + + +G++ L S  ++  +L   N L+ E+  + + DFG+   +L    + S      GT
Sbjct: 107 LDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST-----GT 161

Query: 216 PNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKS----VEEIYHSV 267
                P +W  PEV      S ++D W FG  + E+ + G  P+  +S    VE I    
Sbjct: 162 K---FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF 218

Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
            + K +         +V  ++  C++    +RP  + +LH
Sbjct: 219 RLYKPRLA-----SQSVYELMQHCWKERPEDRPSFSLLLH 253

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 13/132 (9%)

Query: 121 GKICIAMKFYEGSVGDRI---AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKP 177
             I IAM++ EG   D I    ++RGG++    + +    + KG+S LHS  ++  ++KP
Sbjct: 74  SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKP 133

Query: 178 SNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFET 236
           SN+LL+   Q+ L DFG+     G  ++        GT  YMAPE+    ++G P S  +
Sbjct: 134 SNILLTRKGQVKLCDFGVS----GELVNSLAGTF-TGTSFYMAPER----IQGKPYSITS 184

Query: 237 DTWGFGCSIMEM 248
           D W  G +++E+
Sbjct: 185 DVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 13/207 (6%)

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
           S  VC L GI + +    +      G + D + + +  ++   D+L + +Q+AKG+S L 
Sbjct: 68  SPYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKD-RIGSQDLLNWCVQIAKGMSYLE 126

Query: 167 SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW-- 224
            + L+  +L   N+L+   + + + DFG+  LL    + +++     G      P +W  
Sbjct: 127 EVRLVHRDLAARNVLVKSPNHVKITDFGLARLL---DIDETEYHADGGK----VPIKWMA 179

Query: 225 -EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
            E  +    + ++D W +G ++ E++T G +P+ G    EI   ++ K E+   P     
Sbjct: 180 LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLEKGERLPQPPICTI 238

Query: 283 AVENVIIGCFEYDLRNRPLMADILHAF 309
            V  +++ C+  D   RP   +++  F
Sbjct: 239 DVYMIMVKCWMIDSECRPRFRELVDEF 265

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 59.2 bits (143), Expect = 1e-09
 Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 37/269 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEY--HELAVKMLLPLKEDC-AKVFVNK 96
           ++   L L   IG G FG V             EY   ++AVK +   K D  A+ F+ +
Sbjct: 3   LNLQKLTLGEIIGEGEFGAVLQG----------EYTGQKVAVKNI---KCDVTAQAFLEE 49

Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKL-PLPDILRYG 155
              +  K      V  L G+ + NG + I M+           + RG  L  +  +L++ 
Sbjct: 50  -TAVMTKLHHKNLVRLL-GVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFS 106

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           + +A+G+  L S  L+  +L   N+L+SE     + DFG+                 +G 
Sbjct: 107 LDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLA------------RVGSMGV 154

Query: 216 PNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKK 271
            N   P +W  PE       S ++D W +G  + E+ + G  P+   S++E+   V  K 
Sbjct: 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-KG 213

Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
            +   P G P  V  ++  C+E + + RP
Sbjct: 214 YRMEPPEGCPADVYVLMTSCWETEPKKRP 242

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 67/279 (24%), Positives = 107/279 (38%), Gaps = 39/279 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKF 97
           IDP+ L     +G G FG V L       D       +A+KM+    + ED      +  
Sbjct: 1   IDPSELTFLKELGSGQFGVVHLGKWRGKID-------VAIKMIREGAMSED------DFI 47

Query: 98  EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYG 155
           EE  +  K      V  L+G+      I I  ++          ++R GKL    +L   
Sbjct: 48  EEAKVMMKLSHPNLV-QLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMC 106

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
             + + +  L S G +  +L   N L+ E + + + DFG     L R + D       GT
Sbjct: 107 SDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFG-----LARYVLDDQYTSSQGT 161

Query: 216 PNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKS----VEEIYHSV 267
                P +W  PEV      S ++D W FG  + E+ + G  P+   S    VE +    
Sbjct: 162 K---FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY 218

Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            + + K       P  V  ++  C+     +RP    +L
Sbjct: 219 RLYRPKLA-----PTEVYTIMYSCWHEKPEDRPAFKKLL 252

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.8 bits (143), Expect = 2e-09
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 36/271 (13%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
            IG+G FG+V+ A   ++         +A+K ++ L+E   ++   + E  F     S  
Sbjct: 8   CIGKGSFGEVYKAIDKRTNQ------VVAIK-VIDLEEAEDEIEDIQQEIQFLSQCRSPY 60

Query: 110 VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLP---LPDILRYGIQLAKGISDL 165
           +   +G  +   K+ I M++   GS  D +   + GKL    +  ILR   ++  G+  L
Sbjct: 61  ITKYYGSFLKGSKLWIIMEYCGGGSCLDLL---KPGKLDETYIAFILR---EVLLGLEYL 114

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H  G +  ++K +N+LLSE   + L DFG+   L       +      GTP +MAPE   
Sbjct: 115 HEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV---GTPFWMAPEVI- 170

Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS-----VVIKKEKPCIP-SG 279
              +     + D W  G + +E+  G  P          H      ++ K   P +  + 
Sbjct: 171 --KQSGYDEKADIWSLGITAIELAKGEPPLSD------LHPMRVLFLIPKNNPPSLEGNK 222

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                ++ +  C   D + RP   ++L H F
Sbjct: 223 FSKPFKDFVSLCLNKDPKERPSAKELLKHKF 253

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 48/286 (16%)

Query: 41  DPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  L  K  RIG+G FG+V+    +++        E+    ++ L+E  A+  +   ++
Sbjct: 1   DPEELFTKLERIGKGSFGEVYKGIDNRT-------KEVVAIKIIDLEE--AEDEIEDIQQ 51

Query: 100 LFPKFRESQS--VCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP---LPDILRY 154
                 +  S  +   +G  +   K+ I M++  G  G  +   + G L    +  ILR 
Sbjct: 52  EITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILR- 108

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR-- 212
             ++ KG+  LHS   +  ++K +N+LLSE   + L DFG+        L+D+ +     
Sbjct: 109 --EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGV-----AGQLTDTQIKRNTF 161

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           +GTP +MAPE  +   +    F+ D W  G + +E+  G  P       +++   V+   
Sbjct: 162 VGTPFWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPPN-----SDLHPMRVLF-- 211

Query: 273 KPCIPSGLPPAVE--------NVIIGCFEYDLRNRPLMADIL-HAF 309
              IP   PP +E          +  C   D R RP   ++L H F
Sbjct: 212 --LIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 9/103 (8%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP-YLLLGRSLSDSDMALR 212
           Y  ++  G+ DLH   ++  +LKP N+LL +H  + + D G+  ++  G+++       R
Sbjct: 107 YAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG-----R 161

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
           +GT  YMAPE  + E     +F  D W  GC + EM+ G  P+
Sbjct: 162 VGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 43/223 (19%)

Query: 113 LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLV 172
           L+       K+ I ++F +G   D I  +    L  P I     Q+ + ++ LHS  ++ 
Sbjct: 67  LYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIH 126

Query: 173 LNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMAPE--QWEPE 227
            +LK  N+LL+    + L DFG+           S +  R   +GTP +MAPE    E  
Sbjct: 127 RDLKAGNILLTLDGDVKLADFGVSAKNK------STLQKRDTFIGTPYWMAPEVVACETF 180

Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS------VVIKKEKPCIPSGLP 281
              P  ++ D W  G +++E+     P          H       V++K     I    P
Sbjct: 181 KDNPYDYKADIWSLGITLIELAQMEPP----------HHELNPMRVLLK-----ILKSEP 225

Query: 282 PAVEN----------VIIGCFEYDLRNRPLMADIL-HAFESSQ 313
           P ++            +  C   D  +RP  A++L H F S Q
Sbjct: 226 PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 59.1 bits (143), Expect = 2e-09
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 10/147 (6%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD-MALR 212
           YG ++   +  LHS  ++  +LK  NL+L +   + + DFG    L    +SD   M   
Sbjct: 100 YGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 155

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E+++  +++++ 
Sbjct: 156 CGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 212

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 213 R--FPRTLSPEAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 20/190 (10%)

Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL---HSIGLLVLNLK 176
           +G+I I M+  +G   D++ + + G++P   + +  I + KG++ L   H I  +  ++K
Sbjct: 75  DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVK 131

Query: 177 PSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFET 236
           PSN+L++   ++ L DFG+   L+     DS     +GT +YM+PE+ +       S ++
Sbjct: 132 PSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQGT---HYSVQS 183

Query: 237 DTWGFGCSIMEMLTG---IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
           D W  G S++EM  G   I P   K +E ++   V   E     S   P           
Sbjct: 184 DIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPV---EGDPAESETSPRPRPPGRPLSS 240

Query: 294 YDLRNRPLMA 303
           Y   +RP MA
Sbjct: 241 YGPDSRPPMA 250

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 25/224 (11%)

Query: 41  DPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP SL   + +IG G  G V +A    S        ++AVKM+   K+   ++  N  E 
Sbjct: 18  DPRSLLENYIKIGEGSTGIVCIAREKHSG------RQVAVKMMDLRKQQRRELLFN--EV 69

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQL 158
           +  +  + Q+V  ++   ++  ++ + M+F +G ++ D ++Q R  +  +  +    +Q 
Sbjct: 70  VIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQ- 128

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGT 215
              +  LHS G++  ++K  ++LL+   ++ L DFG    +        D+  R   +GT
Sbjct: 129 --ALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKSLVGT 180

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS 259
           P +MAPE      R P   E D W  G  ++EM+ G  P+F  S
Sbjct: 181 PYWMAPEVIS---RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS 221

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 10/111 (9%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL-LGRSLSDSDMALR 212
           Y  +L  G+ DL    ++  +LKP N+LL +   + + D G+   +  G ++       R
Sbjct: 107 YAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG-----R 161

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
           +GT  YMAPE    E     +F  D WG GC I EM+ G  P F K  E +
Sbjct: 162 VGTVGYMAPEVINNE---KYTFSPDWWGLGCLIYEMIQGQSP-FRKRKERV 208

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 58.6 bits (142), Expect = 3e-09
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 127 MKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH 185
           M++  G  GD +   Q+ GK   P  + Y  ++A G+  LHS G++  +LK  N++L   
Sbjct: 80  MEYVNG--GDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAE 137

Query: 186 DQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPE--QWEPEVRGPISFETDTWGFG 242
             + + DFG    +   ++          GTP+Y+APE   ++P  +       D W FG
Sbjct: 138 GHIKIADFG----MCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKS-----VDWWAFG 188

Query: 243 CSIMEMLTGIQPWFGKSVEEIYHSV 267
             + EML G  P+ G+  +E++ S+
Sbjct: 189 VLLYEMLAGQPPFDGEDEDELFQSI 213

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 29/263 (11%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFPKFRESQ 108
           +G+G FG+V+  T         +   +AVK     KED  +    KF  E    K  +  
Sbjct: 3   LGKGNFGEVFKGT-------LKDKTPVAVKTC---KEDLPQELKIKFLSEARILKQYDHP 52

Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGK--LPLPDILRYGIQLAKGISDLH 166
           ++  L G+      I I M+   G  GD ++  R  K  L    ++++ +  A G++ L 
Sbjct: 53  NIVKLIGVCTQRQPIYIVMELVPG--GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE 110

Query: 167 SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGTPNYMAPEQ 223
           S   +  +L   N L+ E++ L + DFG     + R   D   S   L+     + APE 
Sbjct: 111 SKNCIHRDLAARNCLVGENNVLKISDFG-----MSRQEDDGIYSSSGLKQIPIKWTAPEA 165

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
                 G  S E+D W +G  + E  + G+ P+ G + ++    V       C P   P 
Sbjct: 166 LN---YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSC-PQKCPD 221

Query: 283 AVENVIIGCFEYDLRNRPLMADI 305
            V  V+  C++Y   NRP  +++
Sbjct: 222 DVYKVMQRCWDYKPENRPKFSEL 244

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 18/116 (15%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q  + ++  H    +  ++KP N+L+++  Q+ L DFG   +L G      D    + T 
Sbjct: 108 QTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG---PGDDYTDYVATR 164

Query: 217 NYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYH 265
            Y APE      Q+ P V        D W  GC   E+LTG   W GKS V+++Y 
Sbjct: 165 WYRAPELLVGDTQYGPPV--------DVWAIGCVFAELLTGQPLWPGKSDVDQLYL 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 38/222 (17%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL-----F 101
           +  ++G G +G V+ A H ++         +A+K++ P++ED         +E+      
Sbjct: 7   ILEKLGEGSYGSVYKAIHKETG------QVVAIKVV-PVEED--------LQEIIKEISI 51

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
            K  +S  +   +G    N  + I M++   GSV D I +     L   +I     Q  K
Sbjct: 52  LKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSD-IMKITNKTLTEEEIAAILYQTLK 110

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPN 217
           G+  LHS   +  ++K  N+LL+E  Q  L DFG+   L         MA R   +GTP 
Sbjct: 111 GLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT------MAKRNTVIGTPF 164

Query: 218 YMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFG 257
           +MA     PEV   I +    D W  G + +EM  G  P+  
Sbjct: 165 WMA-----PEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 57.8 bits (139), Expect = 4e-09
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 35/273 (12%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
           LK  +G G FG V+LA  +    + D+   +AVK L    ++  K F ++  EL     +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKIL-VAVKTLKDASDNARKDF-HREAELLTNL-Q 65

Query: 107 SQSVCWLHGISVINGKICIAM---------KFYEGSVGDRIAQQRGG---KLPLPDILRY 154
            + +   +G+ V    + +           KF      D +    G    +L    +L  
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHI 125

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             Q+A G+  L S   +  +L   N L+ E+  + +GDFG     + R +  +D   R+G
Sbjct: 126 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG-----MSRDVYSTDY-YRVG 179

Query: 215 TPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV--- 267
             + M P +W P    +    + E+D W  G  + E+ T G QPW+  S  E+   +   
Sbjct: 180 G-HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238

Query: 268 -VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            V+++ + C     P  V ++++GC++ +   R
Sbjct: 239 RVLQRPRTC-----PKEVYDLMLGCWQREPHMR 266

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 13/152 (8%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  ++   +  LH +G++  ++K  N+LL     +VL DFG+    L       + A   
Sbjct: 110 YIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE---ERAYSF 166

Query: 214 -GTPNYMAPEQWEPEVRGPI---SFETDTWGFGCSIMEMLTGIQPWF--GKSVEEIYHSV 267
            GT  YMAPE     +RG         D W  G    E+LTG  P+   G+   +   S 
Sbjct: 167 CGTIEYMAPEV----IRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR 222

Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            I K KP  P  +     + I    E D + R
Sbjct: 223 RILKSKPPFPKTMSAEARDFIQKLLEKDPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 57.5 bits (139), Expect = 6e-09
 Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 41/288 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE---LFPKFRES 107
           IG+G FG V+ A         + +  +AVKML   KE+ +      F+    L  +F + 
Sbjct: 13  IGQGAFGRVFQARAPGLLPY-EPFTMVAVKML---KEEASADMQADFQREAALMAEF-DH 67

Query: 108 QSVCWLHGISVINGKICIAMKFYE-------------------GSVGDRIAQQRGGKLPL 148
            ++  L G+  +   +C+  ++                             +     LPL
Sbjct: 68  PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPL 127

Query: 149 --PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD 206
              + L    Q+A G++ L     +  +L   N L+ E+  + + DFG     L R++  
Sbjct: 128 SCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFG-----LSRNIYS 182

Query: 207 SDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEE 262
           +D      + N   P +W P         + E+D W +G  + E+ + G+QP++G + EE
Sbjct: 183 ADYYK--ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240

Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           + + V       C P   P  + N++  C+     +RP  A I    +
Sbjct: 241 VIYYVRDGNVLSC-PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 57.8 bits (139), Expect = 6e-09
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 15/207 (7%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG +  V L    ++    +  + + V     + +D    +V   + +F +      +
Sbjct: 3   IGRGSYAKVLLVRLKKT----ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 58

Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
             LH       ++   +++  G  GD +   QR  KLP      Y  +++  ++ LH  G
Sbjct: 59  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 116

Query: 170 LLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
           ++  +LK  N+LL     + L D+G    +    L   D      GTPNY+APE    E 
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILRGED 172

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPW 255
            G   F  D W  G  + EM+ G  P+
Sbjct: 173 YG---FSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 57.8 bits (139), Expect = 6e-09
 Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 13/180 (7%)

Query: 122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGLLVLNLKPSNL 180
           ++C  M++  G  G+        ++   D  R YG ++   +  LHS  ++  +LK  NL
Sbjct: 69  RLCFVMEYVNG--GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENL 126

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTW 239
           +L +   + + DFG    L    ++D + M    GTP Y+APE  E    G      D W
Sbjct: 127 MLDKDGHIKITDFG----LCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGR---AVDWW 179

Query: 240 GFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           G G  + EM+ G  P++ +  E+++  ++++  K   P  L    ++++ G    D   R
Sbjct: 180 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIK--FPRTLSADAKSLLSGLLIKDPNKR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 57.3 bits (138), Expect = 6e-09
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 25/210 (11%)

Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN 179
           +GK+ I ++F  G   D I  +    L  P I     Q+ + +  LHS+ ++  +LK  N
Sbjct: 81  DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGN 140

Query: 180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETD 237
           +LL+    + L DFG+    + ++L   D    +GTP +MAPE    E     P  ++ D
Sbjct: 141 VLLTLDGDIKLADFGVSAKNV-KTLQRRDSF--IGTPYWMAPEVVMCETMKDTPYDYKAD 197

Query: 238 TWGFGCSIMEMLTGIQPWFGKSVEEIYHSV--------VIKKEKPCI--PSGLPPAVENV 287
            W  G +++EM           +E  +H +        + K E P +  PS       + 
Sbjct: 198 IWSLGITLIEM---------AQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDF 248

Query: 288 IIGCFEYDLRNRPLMADIL-HAFESSQNAV 316
           +    +     RP  A +L H F SS  + 
Sbjct: 249 LKTALDKHPETRPSAAQLLEHPFVSSVTSN 278

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 57.0 bits (137), Expect = 7e-09
 Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 42/283 (14%)

Query: 41  DPTSLKLK-HRIGRGPFGDVWLATHHQSAD-------DFDEYHELA--VKMLLPLKEDCA 90
           DP  L  K  RIG+G FG+V+    +++         D +E  +    ++  + +   C 
Sbjct: 1   DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPD 150
             +V K+                +G  +   K+ I M++  G  G  +   R G      
Sbjct: 61  SPYVTKY----------------YGSYLKGTKLWIIMEYLGG--GSALDLLRAGPFDEFQ 102

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
           I     ++ KG+  LHS   +  ++K +N+LLSE   + L DFG+        L+D+ + 
Sbjct: 103 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGV-----AGQLTDTQIK 157

Query: 211 LR--LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV 267
               +GTP +MAPE  +   +     + D W  G + +E+  G  P      +  ++   
Sbjct: 158 RNTFVGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-- 212

Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           + K   P +        +  I  C   D   RP   ++L H F
Sbjct: 213 IPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 56.5 bits (136), Expect = 7e-09
 Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 31/272 (11%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPK 103
           LKL   IG+G FGDV L  +  +        ++AVK    +K D  A+ F+ +   +  +
Sbjct: 8   LKLLQTIGKGEFGDVMLGDYRGN--------KVAVKC---IKNDATAQAFLAE-ASVMTQ 55

Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R S  V  L  I    G + I  ++  +GS+ D +  +    L    +L++ + + + +
Sbjct: 56  LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
             L +   +  +L   N+L+SE +   + DFG     L +  S +    +L       P 
Sbjct: 116 EYLEANNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKL-------PV 163

Query: 223 QW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W  PE      F T  D W FG  + E+ + G  P+    ++++   V  K  K   P 
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPD 222

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           G PP V +V+  C+  D   RP    +    E
Sbjct: 223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 57.0 bits (137), Expect = 7e-09
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 27/227 (11%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  + +L   +G G +G V+   H ++        +LA   ++ +  D  +    +   
Sbjct: 3   DPAGIFELVELVGNGTYGQVYKGRHVKTG-------QLAAIKVMDVTGDEEEEIKQEIN- 54

Query: 100 LFPKFRESQSVCWLHGISV------INGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           +  K+   +++   +G  +      ++ ++ + M+F   GSV D I   +G  L    I 
Sbjct: 55  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 114

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
               ++ +G+S LH   ++  ++K  N+LL+E+ ++ L DFG+   L      D  +  R
Sbjct: 115 YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL------DRTVGRR 168

Query: 213 ---LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
              +GTP +MAPE    +        F++D W  G + +EM  G  P
Sbjct: 169 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 215

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 56.7 bits (137), Expect = 8e-09
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 16/198 (8%)

Query: 114 HGISVINGKICIAMKFYEG-SVGDRIA--QQRGGKLPLPDILRYGIQLAKGISDLHSIGL 170
           +   + N ++ I M   EG  +G+     +++  +     I    +Q+   +  LH    
Sbjct: 75  YKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR 134

Query: 171 LV-LNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVR 229
           +V  +L P+N++L E D++ + DFG    L  +   +S +   +GT  Y  PE  + E  
Sbjct: 135 IVHRDLTPNNIMLGEDDKVTITDFG----LAKQKQPESKLTSVVGTILYSCPEIVKNE-- 188

Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL-PPAVENVI 288
            P   + D W FGC + +M T   P++  ++  +   +V    +P +P G+    V +VI
Sbjct: 189 -PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP-LPEGMYSEDVTDVI 246

Query: 289 IGCFEYDLRNRPLMADIL 306
             C   D   RP   DI+
Sbjct: 247 TSCLTPDAEARP---DII 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 56.7 bits (137), Expect = 8e-09
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 14/173 (8%)

Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG 191
           GS+   +    G  LP+  ++    Q+A+G++ L     +  +L   N+L+ E     + 
Sbjct: 87  GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVA 146

Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEM 248
           DFG     L R + +        + +   P +W  PE    G  S ++D W FG  + EM
Sbjct: 147 DFG-----LARLIKEDVYL----SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEM 197

Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
            T G  P+ G +  E+Y  +      PC P+  P  +  +++ C+  +  +RP
Sbjct: 198 FTYGQVPYPGMNNHEVYDQITAGYRMPC-PAKCPQEIYKIMLECWAAEPEDRP 249

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 57.0 bits (137), Expect = 8e-09
 Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 18/210 (8%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   +        ++AVK +   K+   ++  N  E +  +    ++
Sbjct: 29  KIGEGSTGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFN--EVVIMRDYHHEN 80

Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +  +  +    + + + +S LH+ 
Sbjct: 81  VVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVC---LSVLRALSYLHNQ 137

Query: 169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G++  ++K  ++LL+   ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 138 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRKSLVGTPYWMAPEVIS--- 191

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
           R P   E D W  G  ++EM+ G  P+F +
Sbjct: 192 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 221

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 56.7 bits (137), Expect = 9e-09
 Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 16/171 (9%)

Query: 142 RGGKLPL--PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL 199
              K  L   D L   IQ+A G+  L S   +  +L   N L+ E   + + DFG     
Sbjct: 115 ETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFG----- 169

Query: 200 LGRSLSDSD----MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQP 254
           L R +  +D     +  L    +M PE     + G  + E+D W FG  + E+ + G+QP
Sbjct: 170 LSRDIYSADYYRVQSKSLLPVRWMPPEAI---LYGKFTTESDIWSFGVVLWEIFSYGLQP 226

Query: 255 WFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           ++G S +E+   +  ++  PC P   P  V  ++I C+      RP   DI
Sbjct: 227 YYGFSNQEVIEMIRSRQLLPC-PEDCPARVYALMIECWNEIPARRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 57.1 bits (138), Expect = 1e-08
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 15/103 (14%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  +HS G++  +LKPSN+L++E+  L + DFG     L R + D  M   + T 
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFG-----LAR-IQDPQMTGYVSTR 169

Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
            Y APE    W+         E D W  GC   EML G +P F
Sbjct: 170 YYRAPEIMLTWQ-----KYDVEVDIWSAGCIFAEMLEG-KPLF 206

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 56.3 bits (135), Expect = 1e-08
 Identities = 66/290 (22%), Positives = 125/290 (43%), Gaps = 28/290 (9%)

Query: 24  DHLRTVVATPTQTRPWIDPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKML 82
           + LRT+V+         DP     ++ +IG+G  G V+ A       D     E+A+K +
Sbjct: 6   EKLRTIVSIG-------DPKKKYTRYEKIGQGASGTVFTAI------DVATGQEVAIKQI 52

Query: 83  LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQ 141
              K+   ++ +N  E L  K  ++ ++       ++  ++ + M++  G S+ D + + 
Sbjct: 53  NLQKQPKKELIIN--EILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET 110

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG 201
              +  +  + R  +Q    +  LH+  ++  ++K  N+LL     + L DFG    +  
Sbjct: 111 CMDEAQIAAVCRECLQ---ALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167

Query: 202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-V 260
                S M   +GTP +MAPE    +  GP   + D W  G   +EM+ G  P+  ++ +
Sbjct: 168 EQSKRSTM---VGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMVEGEPPYLNENPL 221

Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
             +Y        +   P  L P   + +  C E D+  R    ++L H F
Sbjct: 222 RALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 32/260 (12%)

Query: 29  VVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED 88
           +V  P   R ++D        +IG G  G V +AT   S         +AVK +   K+ 
Sbjct: 11  MVVDPGDPRTYLDNFI-----KIGEGSTGIVCIATVKSSGK------LVAVKKMDLRKQQ 59

Query: 89  CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLP 147
             ++  N  E +  +  + ++V  ++   ++  ++ + M+F EG ++ D +   R  +  
Sbjct: 60  RRELLFN--EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ 117

Query: 148 LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS 207
           +  +    + + K +S LH+ G++  ++K  ++LL+   ++ L DFG    +        
Sbjct: 118 IAAVC---LAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174

Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
            +   +GTP +MAPE      R P   E D W  G  ++EM+ G  P+F +         
Sbjct: 175 SL---VGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------- 221

Query: 268 VIKKEKPCIPSGLPPAVENV 287
              K    I   LPP ++N+
Sbjct: 222 --LKAMKMIRDNLPPKLKNL 239

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 11/148 (7%)

Query: 154 YGIQLAKGISDLHSIGLLVL-NLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD-SDMAL 211
           YG ++   +  LHS   +V  +LK  NL+L +   + + DFG    L    + D + M  
Sbjct: 100 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMKT 155

Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
             GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E+++  +++++
Sbjct: 156 FCGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 212

Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            +   P  L P  ++++ G  + D + R
Sbjct: 213 IR--FPRTLSPEAKSLLSGLLKKDPKQR 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 55.3 bits (133), Expect = 3e-08
 Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 19/222 (8%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML---LPLKEDCAKVFVNKFEELFPKFRES 107
           +G+G FG V LA   +S   +      AVK+L   + L++D  +  + + + +    R  
Sbjct: 3   LGKGSFGKVMLARLKESGRLY------AVKVLKKDVILQDDDVECTMTE-KRILSLARNH 55

Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLH 166
             +  L+       ++   M+F  G  GD +   Q+  +        Y  ++   +  LH
Sbjct: 56  PFLTQLYCCFQTPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEITSALMFLH 113

Query: 167 SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
             G++  +LK  N+LL       L DFG+    +    + S      GTP+Y+APE  + 
Sbjct: 114 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC---GTPDYIAPEILQE 170

Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
            + GP     D W  G  + EML G  P+  ++ ++++ +++
Sbjct: 171 MLYGP---SVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 209

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L + D++ Y  Q+A+G+  L S   +  +L   N+LLSE++ + + DFG     L R + 
Sbjct: 171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFG-----LARDIY 225

Query: 206 DSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
                +R G+      +MAPE    +V    + ++D W FG  + E+ + G  P+ G  +
Sbjct: 226 KDPDYVRKGSARLPLKWMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQI 282

Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E +   +    +   P    P +  +++ C++ D + RP  + ++
Sbjct: 283 NEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALV 328

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 54.9 bits (133), Expect = 4e-08
 Identities = 54/232 (23%), Positives = 85/232 (36%), Gaps = 60/232 (25%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL----- 100
           K K  +G G +  V+ A              +A+K          K+ + + +E      
Sbjct: 4   KGKK-LGEGTYAVVYKA--RDKETG----RIVAIK----------KIKLGERKEAKDGIN 46

Query: 101 FPKFRESQ--------SVCWLHGISVINGKICIAMKFYEGS----VGDRIAQQRGGKLPL 148
           F   RE +        ++  L  +      I +  +F E      + D+        L  
Sbjct: 47  FTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSI-----VLTP 101

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD 208
            DI  Y +   +G+  LHS  +L  +LKP+NLL++    L L DFG     L RS    +
Sbjct: 102 ADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFG-----LARSFGSPN 156

Query: 209 --MALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
             M  ++ T  Y APE       +   V        D W  GC   E+L  +
Sbjct: 157 RKMTHQVVTRWYRAPELLFGARHYGVGV--------DMWSVGCIFAELLLRV 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 54.8 bits (132), Expect = 4e-08
 Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 28/292 (9%)

Query: 39  WIDPTSLKLKHR-------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL 85
           +IDPT L    +             +G G FG V  AT +  +   D   ++AVKML P 
Sbjct: 18  YIDPTQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKS-DAVMKVAVKMLKPT 76

Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQRGG 144
                +  +    ++       +++  L G   I G I +  ++   G + + + ++R  
Sbjct: 77  AHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRES 136

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS- 203
            L L D+L +  Q+AKG++ L S   +  +L   N+LL+    + + DFG     L R  
Sbjct: 137 FLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG-----LARDI 191

Query: 204 LSDSDMALRLGT--P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS 259
           ++DS+  ++     P  +MAPE          +FE+D W +G  + E+ + G  P+ G  
Sbjct: 192 MNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP 248

Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           V+  ++ ++ +  +   P   P  + +++  C++ D   RP    I+     
Sbjct: 249 VDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 54.7 bits (131), Expect = 4e-08
 Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 50/287 (17%)

Query: 41  DPTSLKLK-HRIGRGPFGDVWLATHHQSAD-------DFDEYHELA--VKMLLPLKEDCA 90
           DP  L  K  +IG+G FG+V+    +++         D +E  +    ++  + +   C 
Sbjct: 1   DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLP 149
             +V K+                +G  + + K+ I M++  G S  D +      +  + 
Sbjct: 61  SPYVTKY----------------YGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA 104

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
            ILR   ++ KG+  LHS   +  ++K +N+LLSEH ++ L DFG+        L+D+ +
Sbjct: 105 TILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGV-----AGQLTDTQI 156

Query: 210 ALR--LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
                +GTP +MAPE  +   +     + D W  G + +E+  G  P       E++   
Sbjct: 157 KRNTFVGTPFWMAPEVIK---QSAYDSKADIWSLGITAIELAKGEPPH-----SELHPMK 208

Query: 268 VI----KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           V+    K   P +       ++  +  C   +   RP   ++L H F
Sbjct: 209 VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 23/257 (8%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFPKFRES 107
           RIGRG FG+V+  +    AD+      +AVK     +E        KF  E    K    
Sbjct: 2   RIGRGNFGEVF--SGRLRADN----TPVAVK---SCRETLPPDLKAKFLQEARILKQYSH 52

Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            ++  L G+      I I M+  +G       +  G +L + ++++     A G+  L S
Sbjct: 53  PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES 112

Query: 168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW-EP 226
              +  +L   N L++E + L + DFG     + R   D   A   G      P +W  P
Sbjct: 113 KHCIHRDLAARNCLVTEKNVLKISDFG-----MSREEEDGVYASTGGMKQ--IPVKWTAP 165

Query: 227 EV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
           E    G  S E+D W FG  + E  + G  P+   S ++   ++      PC P   P A
Sbjct: 166 EALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPC-PELCPDA 224

Query: 284 VENVIIGCFEYDLRNRP 300
           V  ++  C+EYD   RP
Sbjct: 225 VYRLMERCWEYDPGQRP 241

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 11/112 (9%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           QL +G+S  H   +L  +LKP NLL++E  +L L DFG   L   +S+     +  + T 
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFG---LARAKSVPTKTYSNEVVTL 167

Query: 217 NYMAPEQW--EPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYH 265
            Y  P+      E   PI    D WG GC + EM TG +P F G +V+E  H
Sbjct: 168 WYRPPDVLLGSTEYSTPI----DMWGVGCILYEMATG-RPMFPGSTVKEELH 214

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 54.6 bits (131), Expect = 5e-08
 Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 40/275 (14%)

Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
           H IG G FG V+ AT+  + +       +AVK +        K    K++++    +E +
Sbjct: 27  HEIGHGSFGAVYFATNSHTNE------VVAVKKM----SYSGKQTNEKWQDII---KEVK 73

Query: 109 SVCWLHGISVINGKIC--------IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA- 159
            +  L   + I  K C        + M++  GS  D +      K PL ++    I    
Sbjct: 74  FLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGA 130

Query: 160 -KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR-LGTPN 217
            +G++ LHS  ++  ++K  N+LL+E  Q+ L DFG        S S S  A   +GTP 
Sbjct: 131 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFG--------SASKSSPANSFVGTPY 182

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCI 276
           +MAPE       G    + D W  G + +E+     P F   ++  +YH  + + + P +
Sbjct: 183 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNDSPTL 240

Query: 277 PSG-LPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            S     +    +  C +   + RP  A++L H F
Sbjct: 241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF 275

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 54.2 bits (130), Expect = 6e-08
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 11/126 (8%)

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
           G  + + ++  +  QL +G++  H   +L  +LKP NLL++E  +L L DFG   L   +
Sbjct: 98  GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFG---LARAK 154

Query: 203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWF-GKS 259
           S+     +  + T  Y  P+     + G   + T  D WG GC   EM TG +P F G +
Sbjct: 155 SIPTKTYSNEVVTLWYRPPDI----LLGSTDYSTQIDMWGVGCIFYEMSTG-RPLFPGST 209

Query: 260 VEEIYH 265
           VEE  H
Sbjct: 210 VEEQLH 215

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.5 bits (132), Expect = 7e-08
 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 30/119 (25%)

Query: 153 RYGI-QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS------ 205
           RY + QL K +  +HS  ++  +LKPSN+LL+   ++ L DFG     L RSLS      
Sbjct: 110 RYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFG-----LARSLSELEENP 164

Query: 206 -DSDMALRLGTPNYMAPEQWEPEVRGPI-------SFETDTWGFGCSIMEMLTGIQPWF 256
            +  +   + T  Y APE         I       +   D W  GC + EML G +P F
Sbjct: 165 ENPVLTDYVATRWYRAPE---------ILLGSTRYTKGVDMWSVGCILGEMLLG-KPLF 213

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 53.4 bits (128), Expect = 1e-07
 Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 32/284 (11%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKF--EELF 101
             L   +G+G FG V  A   Q   +   + ++AVKML   K D  +   + +F  E   
Sbjct: 1   FTLGRMLGKGEFGSVREA---QLKSEDGSFQKVAVKML---KADIFSSSDIEEFLREAAC 54

Query: 102 PKFRESQSVCWLHGISV---INGKICIAMKFY----EGSVGDRIAQQRGGK----LPLPD 150
            K  +  +V  L G+S+     G++ I M        G +   +   R G+    LPL  
Sbjct: 55  MKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQT 114

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
           ++R+ I +A G+  L S   +  +L   N +L+E+  + + DFG     L + +   D  
Sbjct: 115 LVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG-----LSKKIYSGDY- 168

Query: 211 LRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
            R G  + + P +W   E       +  +D W FG ++ E++T G  P+ G    EIY +
Sbjct: 169 YRQGCASKL-PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY-N 226

Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            +IK  +   P      V  ++  C+  + + RP    +    E
Sbjct: 227 YLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 53.4 bits (128), Expect = 1e-07
 Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 12/193 (6%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
           Q+ G+        Y  +L   +  LH   ++  +LKP N+LL     + L DFG    L 
Sbjct: 88  QKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFG----LS 143

Query: 201 GRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS 259
             +L+D+       GT  Y+APE    E +G  +   D W  G  + EM  G  P++ + 
Sbjct: 144 KANLTDNKTTNTFCGTTEYLAPEVLLDE-KG-YTKHVDFWSLGVLVFEMCCGWSPFYAED 201

Query: 260 VEEIYHSVVIKKEKPCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN 318
            +++Y ++   K +   P   L       + G    + ++R  +     A E  ++  + 
Sbjct: 202 TQQMYRNIAFGKVR--FPKNVLSDEGRQFVKGLLNRNPQHR--LGAHRDAVELKEHPFFA 257

Query: 319 DGEWTGLGSRALT 331
           D +W  L  + +T
Sbjct: 258 DIDWDLLSKKQIT 270

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 29/278 (10%)

Query: 41  DPTSLKLKHR-IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  L    R IG G FG V+ A       D      +A+K +    +   + + +  +E
Sbjct: 12  DPEKLFSDLREIGHGSFGAVYFAR------DVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65

Query: 100 L--FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
           +    K R   ++ +  G  +      + M++  GS  D +      K PL ++    + 
Sbjct: 66  VRFLQKLRHPNTIQY-RGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVT 121

Query: 158 LA--KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
               +G++ LHS  ++  ++K  N+LLSE   + LGDFG   ++       +     +GT
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGT 174

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKP 274
           P +MAPE       G    + D W  G + +E+     P F   ++  +YH  + + E P
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNESP 232

Query: 275 CIPSG-LPPAVENVIIGCFEYDLRNRPLMADIL--HAF 309
            + SG       N +  C +   ++RP  +++L  H F
Sbjct: 233 ALQSGHWSEYFRNFVDSCLQKIPQDRP-TSEVLLKHRF 269

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 53.2 bits (127), Expect = 2e-07
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)

Query: 125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA--KGISDLHSIGLLVLNLKPSNLLL 182
           + M++  GS  D +      K PL ++    I     +G++ LHS  ++  ++K  N+LL
Sbjct: 102 LVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL 158

Query: 183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
           +E  Q+ L DFG   +        S     +GTP +MAPE       G    + D W  G
Sbjct: 159 TEPGQVKLADFGSASIA-------SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 211

Query: 243 CSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIPSG-LPPAVENVIIGCFEYDLRNRP 300
            + +E+     P F   ++  +YH  + + E P + S        N +  C +   ++RP
Sbjct: 212 ITCIELAERKPPLFNMNAMSALYH--IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRP 269

Query: 301 LMADIL-HAF 309
              ++L H F
Sbjct: 270 TSEELLKHMF 279

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 20/134 (14%)

Query: 127 MKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD 186
           +K Y  + G R      G L    +  +  QL KGI+  H   +L  +LKP NLL+++  
Sbjct: 84  LKKYMDTHGVR------GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG 137

Query: 187 QLVLGDFGIPYLLLGRS--LSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFG 242
           +L L DFG     L R+  +  +  +  + T  Y AP+     + G  ++ T  D W  G
Sbjct: 138 ELKLADFG-----LARAFGIPVNTFSNEVVTLWYRAPDV----LLGSRTYSTSIDIWSVG 188

Query: 243 CSIMEMLTGIQPWF 256
           C + EM+TG +P F
Sbjct: 189 CIMAEMITG-RPLF 201

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 50/246 (20%)

Query: 51  IGRGPFGDVWLATHHQSAD--------DFDEYHELA------VKMLLPLKEDCAKVFVNK 96
           +G G +G V    H ++ +        D +E  E+       +KML  LK++        
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE-------N 61

Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
             EL   FR               GK+ +  ++ E ++ + + +   G  P   +  Y  
Sbjct: 62  IVELKEAFRR-------------RGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIY 107

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS---DSDMALRL 213
           QL K I   H   ++  ++KP NLL+S +D L L DFG       R+LS   +++    +
Sbjct: 108 QLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFG-----FARNLSEGSNANYTEYV 162

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKKE 272
            T  Y +PE     +  P     D W  GC + E+  G QP F G+S  EI     I+K 
Sbjct: 163 ATRWYRSPELL---LGAPYGKAVDMWSVGCILGELSDG-QPLFPGES--EIDQLFTIQKV 216

Query: 273 KPCIPS 278
              +P+
Sbjct: 217 LGPLPA 222

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%)

Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG 191
           GS+ D + Q R    P   +L + +Q+AKG+  L    ++  NL   N+LL     + + 
Sbjct: 93  GSLLDHVRQHRDSLDP-QRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIA 151

Query: 192 DFGIPYLLLGRSLSDSDMAL--RLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
           DFG+  LL      D          TP  +MA E     + G  + ++D W +G ++ EM
Sbjct: 152 DFGVADLL----YPDDKKYFYSEHKTPIKWMALESI---LFGRYTHQSDVWSYGVTVWEM 204

Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
           ++ G +P+ G    E+   ++ K E+   P      V  V++ C+  D   RP   ++ +
Sbjct: 205 MSYGAEPYAGMRPHEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263

Query: 308 AF 309
            F
Sbjct: 264 EF 265

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
           QR  KLP      Y  +++  ++ LH  G++  +LK  N+LL     + L D+G    + 
Sbjct: 88  QRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYG----MC 143

Query: 201 GRSLSDSDM-ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
              +   D  +   GTPNY+APE    E  G   F  D W  G  + EM+ G  P+
Sbjct: 144 KEGIRPGDTTSTFCGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 17/172 (9%)

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
           S  +   +G    +G+I I M+  +G   D++ ++   ++P   + +  I + +G++ L 
Sbjct: 62  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLR 120

Query: 166 --HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             H I  +  ++KPSN+L++   ++ L DFG+   L+     DS     +GT +YM+PE+
Sbjct: 121 EKHQI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPER 173

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTG---IQPWFGKSVEEIYHSVVIKKE 272
            +       S ++D W  G S++E+  G   I P   K +E I+   V+  E
Sbjct: 174 LQGT---HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGE 222

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 23/214 (10%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +L  R+G G +GDV+ A +  +        ELA   ++ L+       + + E    K  
Sbjct: 12  ELIQRVGSGTYGDVYKARNLHTG-------ELAAVKIIKLEPGDDFSLIQQ-EIFMVKEC 63

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--GKLPLPDILRYGIQLAKGIS 163
           +  ++    G  +   K+ I M++  G     I    G   +L +  + R  +Q   G++
Sbjct: 64  KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQ---GLA 120

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMA 220
            LHS G +  ++K +N+LL+++  + L DFG+   +       + +A R   +GTP +MA
Sbjct: 121 YLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKI------TATIAKRKSFIGTPYWMA 174

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
           PE    E  G  +   D W  G + +E L  +QP
Sbjct: 175 PEVAAVEKNGGYNQLCDIWAVGITAIE-LAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L L D++ Y  Q+A+G+  L S   +  +L   N+LLSE++ + + DFG     L R + 
Sbjct: 170 LTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFG-----LARDIY 224

Query: 206 DSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
                +R G       +MAPE    +V    + ++D W FG  + E+ + G  P+ G  +
Sbjct: 225 KDPDYVRKGDARLPLKWMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQI 281

Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           +E +   + +  +   P    P + ++++ C+  +  +RP  +++
Sbjct: 282 DEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSEL 326

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 29/228 (12%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
           DP  + +L   +G G +G V+   H ++        +LA   ++ + ED  +    K E 
Sbjct: 13  DPAGIFELVEVVGNGTYGQVYKGRHVKTG-------QLAAIKVMDVTEDEEEEI--KLEI 63

Query: 99  ELFPKFRESQSVCWLHGISVI------NGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDI 151
            +  K+   +++   +G  +       + ++ + M+F   GSV D +   +G  L    I
Sbjct: 64  NMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWI 123

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
                ++ +G++ LH+  ++  ++K  N+LL+E+ ++ L DFG+   L      D  +  
Sbjct: 124 AYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL------DRTVGR 177

Query: 212 R---LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
           R   +GTP +MAPE    +        + +D W  G + +EM  G  P
Sbjct: 178 RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP 225

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 52.6 bits (126), Expect = 3e-07
 Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 19/183 (10%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG----RSLSDSDM 209
           Y  ++   +  LH +G++  ++K  N+LL     +VL DFG+    L     R+ S    
Sbjct: 110 YSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYS---- 165

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLTGIQPWF--GKSVEEIYH 265
               GT  YMAPE     +RG        D W  G  I E+LTG  P+   G+   +   
Sbjct: 166 --FCGTIEYMAPEI----IRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV 219

Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGL 325
           S  I K  P  PS + P  ++++      D + R L A    A E  ++  +   +W  L
Sbjct: 220 SRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKR-LGAGPQGASEIKEHPFFKGLDWEAL 278

Query: 326 GSR 328
             R
Sbjct: 279 ALR 281

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 52.6 bits (126), Expect = 3e-07
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 15/103 (14%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ KG+  +H+ G++  +LKP NL ++E  +L + DFG     L R  +DS+M   + T 
Sbjct: 126 QMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG-----LARQ-TDSEMTGYVVTR 179

Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
            Y APE    W    +       D W  GC + EMLTG +P F
Sbjct: 180 WYRAPEVILNWMHYTQ-----TVDIWSVGCIMAEMLTG-KPLF 216

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 12/149 (8%)

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LHS  ++  ++K  N+LL     + L DFG    +       S M   +GTP +MAPE  
Sbjct: 131 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVV 187

Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCI--PSGLP 281
             +  GP   + D W  G   +EM+ G  P+  ++ +  +Y  ++     P +  P  L 
Sbjct: 188 TRKAYGP---KVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIATNGTPELQNPEKLS 242

Query: 282 PAVENVIIGCFEYDLRNRPLMADIL-HAF 309
               + +  C E D+  R    ++L H F
Sbjct: 243 AIFRDFLNRCLEMDVEKRGSAKELLQHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 113 LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLV 172
           LH I      +    ++    +   + Q  GG  P  ++  +  QL +G++ +H   +L 
Sbjct: 68  LHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPY-NVRLFMFQLLRGLAYIHGQHILH 126

Query: 173 LNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPI 232
            +LKP NLL+S   +L L DFG   L   +S+     +  + T  Y  P+     + G  
Sbjct: 127 RDLKPQNLLISYLGELKLADFG---LARAKSIPSQTYSSEVVTLWYRPPDV----LLGAT 179

Query: 233 SFET--DTWGFGCSIMEMLTGIQPWF 256
            + +  D WG GC  +EML G QP F
Sbjct: 180 DYSSALDIWGAGCIFIEMLQG-QPAF 204

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 52.4 bits (125), Expect = 3e-07
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 10/184 (5%)

Query: 76  ELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
           +L    ++ L+E+    F    E    K  +  ++  LH I      + +  ++    + 
Sbjct: 31  KLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLC 90

Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI 195
             + +  GG  P  ++  +  QL +G+S +H   +L  +LKP NLL+S+  +L L DFG 
Sbjct: 91  QYMDKHPGGLHP-ENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFG- 148

Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQ 253
             L   +S+     +  + T  Y  P+     + G   + T  D WG GC  +EM+ G+ 
Sbjct: 149 --LARAKSVPSHTYSNEVVTLWYRPPDV----LLGSTEYSTCLDMWGVGCIFVEMIQGVA 202

Query: 254 PWFG 257
            + G
Sbjct: 203 AFPG 206

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 46/295 (15%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---------LKEDCAKVFVN 95
           LK    +G G FG V L  +    D+  E  ++AVK L P         LK++  ++  N
Sbjct: 6   LKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADLKKEI-EILRN 62

Query: 96  KFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRY 154
            + E   K++    +C   G + I     + M+F   GS+ + + + +  K+ L   L+Y
Sbjct: 63  LYHENIVKYK---GICTEDGGNGIK----LIMEFLPSGSLKEYLPRNKN-KINLKQQLKY 114

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
            +Q+ KG+  L S   +  +L   N+L+    Q+ +GDFG     L +++   D      
Sbjct: 115 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG-----LTKAIET-DKEYYTV 168

Query: 215 TPNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT--------------GIQPWFG 257
             +  +P  W  PE  ++      +D W FG ++ E+LT               I P  G
Sbjct: 169 KDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG 228

Query: 258 K-SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           + +V  +   +   K  P  P   P  V  ++  C+E+    R    +++  FE+
Sbjct: 229 QMTVTRLVRVLEEGKRLPR-PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 27/217 (12%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFP 102
            +L  RIG G +GDV+ A +  +        ELA   ++ L+  ED A V   + E +  
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTG-------ELAAIKVIKLEPGEDFAVV---QQEIIMM 60

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--GKLPLPDILRYGIQLAK 160
           K  +  ++    G  +   K+ I M+F  G     I    G   +  +  + R  +Q   
Sbjct: 61  KDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQ--- 117

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPN 217
           G+  LHS G +  ++K +N+LL+++  + L DFG+   +       + +A R   +GTP 
Sbjct: 118 GLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI------TATIAKRKSFIGTPY 171

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
           +MAPE    E +G  +   D W  G + +E L  +QP
Sbjct: 172 WMAPEVAAVERKGGYNQLCDIWAVGITAIE-LAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 52.1 bits (125), Expect = 4e-07
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 36/273 (13%)

Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFEELFPKFRES 107
             IG G FG V+ A   ++ +       +A+K M    K+        K++++  + R  
Sbjct: 21  REIGHGSFGAVYFARDVRTNE------VVAIKKMSYSGKQS-----NEKWQDIIKEVRFL 69

Query: 108 QSVCWLHGISVINGKIC--------IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           Q +   + I     K C        + M++  GS  D +   +   L   +I        
Sbjct: 70  QQLRHPNTIEY---KGCYLREHTAWLVMEYCLGSASDILEVHKKP-LQEVEIAAICHGAL 125

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           +G++ LHS   +  ++K  N+LL+E   + L DFG        SL     +  +GTP +M
Sbjct: 126 QGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFG------SASLVSPANSF-VGTPYWM 178

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIPS 278
           APE       G    + D W  G + +E+     P F   ++  +YH  + + + P + S
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNDSPTLSS 236

Query: 279 -GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                   N +  C +   ++RP   ++L H F
Sbjct: 237 NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 52.1 bits (125), Expect = 4e-07
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 9/109 (8%)

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LHS  ++  +LKP NLLL     + + DFG       + + D    L  GTP Y+APE  
Sbjct: 134 LHSKDIIYRDLKPENLLLDNKGHVKVTDFG-----FAKKVPDRTFTL-CGTPEYLAPEVI 187

Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           + +  G      D W  G  + E + G  P+F  +   IY  ++  + K
Sbjct: 188 QSKGHGK---AVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK 233

Length = 329

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 52.3 bits (125), Expect = 4e-07
 Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ-LVLGDFGIPYLLLGRSL 204
           LPL  +  Y  QL + ++ +HS  +   +LKP NLL+  +   L L DFG    LL    
Sbjct: 167 LPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR 226

Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWFGKS 259
           S S +  R     Y APE     + G  ++ T  D W  GC I EM+ G   + G+S
Sbjct: 227 SVSYICSRF----YRAPEL----MLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275

Length = 440

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 51.6 bits (124), Expect = 5e-07
 Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 38/251 (15%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA----KVF 93
           W +    L L   +G G FG V  A      D+ +E   +AVKML   K+D         
Sbjct: 7   WELPRDRLTLGKPLGEGAFGQVVKAEA-VGLDNPNETSTVAVKML---KDDATEKDLSDL 62

Query: 94  VNKFEELFPKFRESQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR---------- 142
           V++ E +     + +++  L G+    G + + +++   G++ D +  +R          
Sbjct: 63  VSEME-MMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDD 121

Query: 143 ----GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL 198
                  L   D++ +  Q+A+G+  L S   +  +L   N+L++E   + + DFG    
Sbjct: 122 PRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFG---- 177

Query: 199 LLGRSLSDSDMALRLGT---P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQ 253
            L R +   D   +      P  +MAPE     V    + ++D W FG  + E+ T G  
Sbjct: 178 -LARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV---YTHQSDVWSFGVLLWEIFTLGGS 233

Query: 254 PWFGKSVEEIY 264
           P+ G  VEE++
Sbjct: 234 PYPGIPVEELF 244

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 51.6 bits (124), Expect = 5e-07
 Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 17/108 (15%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD--MALRLG 214
           QL +G+  +HS  +L  +LKPSNLLL+ +  L + DFG     L R+ S+    M   + 
Sbjct: 116 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG-----LARTTSEKGDFMTEYVV 170

Query: 215 TPNYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GK 258
           T  Y APE       E    I    D W  GC   E+L   +P F GK
Sbjct: 171 TRWYRAPELLLNCS-EYTTAI----DVWSVGCIFAELLGR-KPLFPGK 212

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 51.8 bits (124), Expect = 6e-07
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 15/188 (7%)

Query: 129 FYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL 188
           + +  V   I ++    L   D+L +  Q+AKG+S L S   +  +L   N+LL+     
Sbjct: 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRIT 253

Query: 189 VLGDFGIPYLLLGRSL-SDSDMAL----RLGTPNYMAPEQWEPEVRGPISFETDTWGFGC 243
            + DFG     L R + +DS+  +    RL    +MAPE     V    +FE+D W +G 
Sbjct: 254 KICDFG-----LARDIRNDSNYVVKGNARLPV-KWMAPESIFNCV---YTFESDVWSYGI 304

Query: 244 SIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM 302
            + E+ + G  P+ G  V+  ++ ++ +  +   P   P  + +++  C++ D   RP  
Sbjct: 305 LLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTF 364

Query: 303 ADILHAFE 310
             I+   E
Sbjct: 365 KQIVQLIE 372

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 51.3 bits (123), Expect = 6e-07
 Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 44/179 (24%)

Query: 139 AQQRGGKLPLPDILRY-------------GI-----------QLAKGISDLHSIGLLVLN 174
           A Q GGKL L  IL Y             GI           +++  +  LH  G++  +
Sbjct: 68  AFQTGGKLYL--ILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRD 125

Query: 175 LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPIS 233
           LKP N+LL     + L DFG    L   S+ +  +     GT  YMAPE     +R    
Sbjct: 126 LKPENILLDAQGHVKLTDFG----LCKESIHEGTVTHTFCGTIEYMAPEIL---MRSGHG 178

Query: 234 FETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAVENVI 288
              D W  G  + +MLTG  P+      K++++I       K K  +P  L P   +++
Sbjct: 179 KAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL------KGKLNLPPYLTPEARDLL 231

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 50.8 bits (122), Expect = 7e-07
 Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 12/139 (8%)

Query: 174 NLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPIS 233
           ++KPSN+LL  +  + L DFGI   L+  S++ +  A   G   YMAPE+ +P  R    
Sbjct: 133 DVKPSNILLDRNGNIKLCDFGISGQLV-DSIAKTRDA---GCRPYMAPERIDPSARDGYD 188

Query: 234 FETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHSVVIKKEKPCIPSGLP----PAVENV 287
             +D W  G ++ E+ TG  P+  +    +++  + V+K + P + +       P+  N 
Sbjct: 189 VRSDVWSLGITLYEVATGKFPYPKWNSVFDQL--TQVVKGDPPILSNSEEREFSPSFVNF 246

Query: 288 IIGCFEYDLRNRPLMADIL 306
           I  C   D   RP   ++L
Sbjct: 247 INLCLIKDESKRPKYKELL 265

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 51.4 bits (123), Expect = 7e-07
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 14/105 (13%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  G+  +HS G++  +LKP NL ++E  +L + DFG     L R  +D++M   + T 
Sbjct: 125 QMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFG-----LARH-ADAEMTGYVVTR 178

Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
            Y APE    W    +       D W  GC + EMLTG   + GK
Sbjct: 179 WYRAPEVILNWMHYNQ-----TVDIWSVGCIMAEMLTGKTLFKGK 218

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 37/293 (12%)

Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           P +   S+ L   +G G FG+V+   +     D     EL V +   L E C++   + F
Sbjct: 1   PEVPRDSITLLRALGHGAFGEVYEGLYRGRDGD---AVELQVAVK-TLPESCSEQDESDF 56

Query: 98  --EEL-FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD--------RIAQQRGGKL 146
             E L   KF   Q++  L G+S       I ++   G  GD        R   +R   L
Sbjct: 57  LMEALIMSKFNH-QNIVRLIGVSFERLPRFILLELMAG--GDLKSFLRENRPRPERPSSL 113

Query: 147 PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH--DQLV-LGDFGIPYLLLGRS 203
            + D+L     +AKG   L     +  ++   N LL+     ++  + DFG     + R 
Sbjct: 114 TMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG-----MARD 168

Query: 204 LSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS 259
           +  +    + G    M P +W P    + G  + +TD W FG  + E+ + G  P+ G++
Sbjct: 169 IYRASYYRKGGRA--MLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT 226

Query: 260 VEEIYHSVVI--KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            +E+   V    + + P    G P  V  ++  C+++   +RP  A IL   +
Sbjct: 227 NQEVMEFVTGGGRLDPP---KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 26/274 (9%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +GRG FG+V+LA   +  ++      + VK L   K++  +    +  ++F K     +V
Sbjct: 13  LGRGEFGEVFLA-KAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHK-NV 70

Query: 111 CWLHGISVINGKICIAMKFYEGSVGD-----RIAQQRGGKL---PL--PDILRYGIQLAK 160
             L G+        + +++ +  +GD     R  + +  KL   PL     +    Q+A 
Sbjct: 71  VRLLGLCREAEPHYMILEYTD--LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL 128

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G+  L +   +  +L   N L+S   ++      +  L L + + +S+        N + 
Sbjct: 129 GMDHLSNARFVHRDLAARNCLVSSQREV-----KVSLLSLSKDVYNSEYYKLR---NALI 180

Query: 221 PEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE       S ++D W FG  + E+ T G  P++G S EE+ + +   K +  +
Sbjct: 181 PLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           P G P  +  ++  C+  + ++RP  ++++ A  
Sbjct: 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 43/226 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKF 104
           K+  +IG G F +V  A   ++     +Y+  A+K +   K+    +  VN   E+    
Sbjct: 2   KILGKIGEGTFSEVLKAQSRKTG----KYY--AIKCM---KKHFKSLEQVNNLREIQALR 52

Query: 105 RESQSVCWLHGISVI----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPD--ILRYGIQL 158
           R S     L  I V+     G++ +  +  + ++ + I   +G K PLP+  +  Y  QL
Sbjct: 53  RLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELI---KGRKRPLPEKRVKSYMYQL 109

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG--------IPYLLLGRSLSDSDMA 210
            K +  +H  G+   ++KP N+L+ + D L L DFG         PY             
Sbjct: 110 LKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY------------T 156

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
             + T  Y APE    +  G    + D W  GC   E+L+ + P F
Sbjct: 157 EYISTRWYRAPECLLTD--GYYGPKMDIWAVGCVFFEILS-LFPLF 199

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 22/158 (13%)

Query: 120 NGKICIAMKF-YEGS----VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLN 174
           NGK  + + F Y  S      D   +  G  LP   I  +  QL KG++  H  G++  +
Sbjct: 76  NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRD 135

Query: 175 LKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSD--SDMALRLGTPNYMAPEQWEPEVRGP 231
           LKP NLL+ +   L+ + D G     LGR+ S         + T  Y APE     + G 
Sbjct: 136 LKPQNLLVDKQKGLLKIADLG-----LGRAFSIPVKSYTHEIVTLWYRAPEV----LLGS 186

Query: 232 ISFET--DTWGFGCSIMEMLTGIQPWF-GKS-VEEIYH 265
             + T  D W  GC   EM    QP F G S ++++ H
Sbjct: 187 THYSTPVDIWSVGCIFAEMSRK-QPLFPGDSELQQLLH 223

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 50.4 bits (120), Expect = 1e-06
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 37/154 (24%)

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP-----------YLLLGRSLSDSDM 209
            I  +H +G +  ++KP NLLL     + L DFG+            Y  L  SL  SD 
Sbjct: 113 AIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLP-SDF 171

Query: 210 ALR----------------------LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
             +                      +GTP+Y+APE +   ++   +   D W  G  + E
Sbjct: 172 TFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVF---MQTGYNKLCDWWSLGVIMYE 228

Query: 248 MLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP 281
           ML G  P+  ++ +E Y  V+  KE    P  +P
Sbjct: 229 MLIGYPPFCSETPQETYKKVMNWKETLIFPPEVP 262

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 12/117 (10%)

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ +GI   HS  ++  ++KP N+L+S+   + L DFG    L       +D    
Sbjct: 104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY--- 160

Query: 213 LGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLTGIQPWF-GKS-VEEIYH 265
           + T  Y APE     + G   +    D W  GC + EMLTG +P F G S ++++YH
Sbjct: 161 VATRWYRAPEL----LVGDTKYGRAVDIWAVGCLVTEMLTG-EPLFPGDSDIDQLYH 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L L D++ Y  Q+AKG+  L S   +  +L   N+LLSE++ + + DFG     L R + 
Sbjct: 176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFG-----LARDIY 230

Query: 206 DSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
                +R G       +MAPE     V    + ++D W FG  + E+ + G  P+ G  +
Sbjct: 231 KDPDYVRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKI 287

Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           +E +   + +  +   P    P +   ++ C+  +   RP  ++++
Sbjct: 288 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 333

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 11/112 (9%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G++  H   +L  +LKP NLL++E  +L L DFG   L   +S+     +  + T 
Sbjct: 112 QILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFG---LARAKSVPTKTYSNEVVTL 168

Query: 217 NYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWF-GKSVEEIYH 265
            Y  P+     + G   + T  D WG GC   EM +G +P F G +VE+  H
Sbjct: 169 WYRPPDV----LLGSSEYSTQIDMWGVGCIFFEMASG-RPLFPGSTVEDELH 215

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 9/115 (7%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  Q+      L S+ ++  +LKP NLLL +   + + DFG   ++  R+ +        
Sbjct: 136 YAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYT------LC 189

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
           GTP Y+APE       G  +   D W  G  I E+L G  P++      IY  ++
Sbjct: 190 GTPEYIAPEILLNVGHGKAA---DWWTLGIFIYEILVGCPPFYANEPLLIYQKIL 241

Length = 340

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 33/268 (12%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKF 97
           I+   LKL   IG+G FGDV L  +           ++AVK    LK+D   A+ F+ + 
Sbjct: 3   INSKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKC---LKDDSTAAQAFLAE- 50

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
             +    R    V  L G+ +    + I  ++   GS+ D +  +    + L   L + +
Sbjct: 51  ASVMTTLRHPNLVQLL-GVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFAL 109

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
            + +G+  L     +  +L   N+L+SE     + DFG     L +  S    + +L   
Sbjct: 110 DVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFG-----LAKEASQGQDSGKL--- 161

Query: 217 NYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
               P +W  PE       S ++D W FG  + E+ + G  P+    ++++   V     
Sbjct: 162 ----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR 217

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRP 300
               P G PP V  V+  C+E D   RP
Sbjct: 218 MEA-PEGCPPEVYKVMKDCWELDPAKRP 244

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 49.7 bits (118), Expect = 3e-06
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 14/98 (14%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  +HS  ++  +LKPSNL ++E  +L + DFG     L R  +D +M   + T 
Sbjct: 128 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 181

Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
            Y APE    W        +   D W  GC + E+LTG
Sbjct: 182 WYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 214

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 3e-06
 Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 15/200 (7%)

Query: 106 ESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
           +   V  L GI  ++ ++ +  +    G + D +   +   +    +L + +Q+AKG+S 
Sbjct: 67  DHPHVVRLLGIC-LSSQVQLITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSY 124

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG--TP-NYMAP 221
           L    L+  +L   N+L+     + + DFG+  LL      D       G   P  +MA 
Sbjct: 125 LEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----DVDEKEYHAEGGKVPIKWMAL 180

Query: 222 EQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
           E          + ++D W +G ++ E++T G +P+ G    EI   ++ K E+   P   
Sbjct: 181 ESIL---HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI-PDLLEKGERLPQPPIC 236

Query: 281 PPAVENVIIGCFEYDLRNRP 300
              V  V++ C+  D  +RP
Sbjct: 237 TIDVYMVLVKCWMIDAESRP 256

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 55/275 (20%)

Query: 49  HRIGRGPFGDV----WLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
             +G G FG V    +L    +         E+AVK L        K      +E     
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEV-------EVAVKTLKQEHIAAGK------KEFL--- 44

Query: 105 RESQSVCWLH--------GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
           RE+  +  L         G+      + + M+    G +   + ++R  ++P+ D+    
Sbjct: 45  REASVMAQLDHPCIVRLIGVCKGEP-LMLVMELAPLGPLLKYLKKRR--EIPVSDLKELA 101

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
            Q+A G++ L S   +  +L   N+LL    Q  + DFG     + R       AL  G+
Sbjct: 102 HQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG-----MSR-------ALGAGS 149

Query: 216 PNYMA------PEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
             Y A      P +W  PE    G  S ++D W +G ++ E  + G +P+      E+  
Sbjct: 150 DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIA 209

Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
            +   +  P  P   P  + ++++ C++Y   +RP
Sbjct: 210 MLESGERLPR-PEECPQEIYSIMLSCWKYRPEDRP 243

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 49.2 bits (118), Expect = 3e-06
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 13/110 (11%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD------MA 210
           QL +G+  +HS  ++  +LKPSNLL++E  +L +GDFG     + R LS S       M 
Sbjct: 115 QLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFG-----MARGLSSSPTEHKYFMT 169

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV 260
             + T  Y APE          +   D W  GC   EML   Q + GK+ 
Sbjct: 170 EYVATRWYRAPELLLSLPE--YTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 50.2 bits (120), Expect = 3e-06
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 20/119 (16%)

Query: 148 LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS--LS 205
           +   L    ++   I  +HS G+L  +LKP N+LL    ++V+ D+G           L 
Sbjct: 112 VGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLL 171

Query: 206 DSDMALR-------------LGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           D D+  R             +GTP+YMAPE+    + G P S  TD +  G  + +MLT
Sbjct: 172 DIDVDERNICYSSMTIPGKIVGTPDYMAPER----LLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 49.1 bits (118), Expect = 3e-06
 Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 22/119 (18%)

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           +QL  G++ LH   +L  +LK SNLLL+    L + DFG     L R        L+  T
Sbjct: 113 LQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFG-----LAREYGSP---LKPYT 164

Query: 216 PN-----YMAPEQW--EPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS-VEEIYH 265
                  Y APE      E    I    D W  GC   E+LT  +P F GKS ++++  
Sbjct: 165 QLVVTLWYRAPELLLGAKEYSTAI----DMWSVGCIFAELLTK-KPLFPGKSEIDQLNK 218

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 49.0 bits (117), Expect = 4e-06
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL 182
           + I  ++ E  + + + Q     L       +  QL +G+  +HS  +L  +LKP+N+ +
Sbjct: 91  VYIVQEYMETDLANVLEQGP---LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147

Query: 183 SEHDQLVL--GDFGIPYLLLGRSLSDSD------MALRLGTPNYMAPEQWEPEVRGPISF 234
           +  + LVL  GDFG+  ++      D        ++  L T  Y +P      +  P ++
Sbjct: 148 NT-EDLVLKIGDFGLARIV------DPHYSHKGYLSEGLVTKWYRSPRL----LLSPNNY 196

Query: 235 E--TDTWGFGCSIMEMLTG 251
               D W  GC   EMLTG
Sbjct: 197 TKAIDMWAAGCIFAEMLTG 215

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 48.9 bits (116), Expect = 4e-06
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 14/98 (14%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           QL +G+  +HS G++  +LKPSN+ ++E  +L + DFG     L R  +D +M   + T 
Sbjct: 126 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG-----LARQ-ADDEMTGYVATR 179

Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
            Y APE    W        +   D W  GC + E+L G
Sbjct: 180 WYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLKG 212

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 48.5 bits (115), Expect = 4e-06
 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 16/182 (8%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  ++   +  LH +G++  ++K  N+LL  +  +VL DFG+          + + A   
Sbjct: 110 YSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE---DEVERAYSF 166

Query: 214 -GTPNYMAPEQWEPEVRGPISFE---TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV- 268
            GT  YMAP+     VRG         D W  G  + E+LTG  P F    E+   + + 
Sbjct: 167 CGTIEYMAPDI----VRGGDGGHDKAVDWWSMGVLMYELLTGASP-FTVDGEKNSQAEIS 221

Query: 269 --IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLG 326
             I K +P  P  +    +++I      D + R L      A E  ++  +    W  L 
Sbjct: 222 RRILKSEPPYPQEMSALAKDIIQRLLMKDPKKR-LGCGPSDADEIKKHPFFQKINWDDLA 280

Query: 327 SR 328
           ++
Sbjct: 281 AK 282

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 48.6 bits (115), Expect = 5e-06
 Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 20/263 (7%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG+G  G V+      +A D     E+A+K +   ++   ++ +N  E L  +  ++ +
Sbjct: 26  KIGQGASGTVY------TAIDIATGQEVAIKQMNLQQQPKKELIIN--EILVMRENKNPN 77

Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           +       ++  ++ + M++  G S+ D + +    +  +  + R  +Q    +  LHS 
Sbjct: 78  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALDFLHSN 134

Query: 169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
            ++  ++K  N+LL     + L DFG    +       S M   +GTP +MAPE    + 
Sbjct: 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRKA 191

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVENV 287
            GP   + D W  G   +EM+ G  P+  ++ +  +Y        +   P  L     + 
Sbjct: 192 YGP---KVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDF 248

Query: 288 IIGCFEYDLRNRPLMADIL-HAF 309
           +  C E D+  R    ++L H F
Sbjct: 249 LNRCLEMDVDRRGSAKELLQHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 34/121 (28%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG------IPYLLLGRSLSDSDMA 210
           QL +G++  H   +L  +LKP NLL+SE  +L L DFG      +P     ++ S+  + 
Sbjct: 111 QLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP----SKTYSNEVVT 166

Query: 211 L-------RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF--GKSVE 261
           L        LG+  Y              S   D WG GC   EM TG +P F     VE
Sbjct: 167 LWYRPPDVLLGSTEY--------------STSLDMWGVGCIFYEMATG-RPLFPGSTDVE 211

Query: 262 E 262
           +
Sbjct: 212 D 212

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 23/186 (12%)

Query: 122 KICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS 178
           K+C  +    G  GD    ++Q   G     ++  Y  ++  G+  +H+  ++  +LKP+
Sbjct: 71  KLCFILDLMNG--GDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPA 126

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDT 238
           N+LL EH  + + D G     L    S       +GT  YMAPE  +   +G     +  
Sbjct: 127 NILLDEHGHVRISDLG-----LACDFSKKKPHASVGTHGYMAPEVLQ---KGTAYDSSAD 178

Query: 239 W-GFGCSIMEMLTGIQPWFGKSVEEIYH----SVVIKKEKPCIPSGLPPAVENVIIGCFE 293
           W   GC + ++L G  P+     ++ +     ++ +  E   +P    P +++++ G  +
Sbjct: 179 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVE---LPDSFSPELKSLLEGLLQ 235

Query: 294 YDLRNR 299
            D+  R
Sbjct: 236 RDVSKR 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 48.4 bits (116), Expect = 6e-06
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 19/105 (18%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  +HS G++  +LKPSN+ ++E  +L + DFG     L R   D +M   + T 
Sbjct: 126 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG-----LARHT-DDEMTGYVATR 179

Query: 217 NYMAPE---QWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWF 256
            Y APE    W       + +    D W  GC + E+LTG +  F
Sbjct: 180 WYRAPEIMLNW-------MHYNQTVDIWSVGCIMAELLTG-KTLF 216

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 48.5 bits (115), Expect = 6e-06
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 35/153 (22%)

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL-------LGRSLSD---SDMA 210
            I  +H +G +  ++KP NLLL     + L DFG+   L         R+L+    SD +
Sbjct: 113 AIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFS 172

Query: 211 LR----------------------LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
            +                      +GTP+Y+APE +   ++   +   D W  G  + EM
Sbjct: 173 FQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVF---MQTGYNKLCDWWSLGVIMYEM 229

Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP 281
           L G  P+  ++ +E Y  V+  KE    P  +P
Sbjct: 230 LIGYPPFCSETPQETYRKVMNWKETLVFPPEVP 262

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 48.2 bits (114), Expect = 6e-06
 Identities = 56/263 (21%), Positives = 114/263 (43%), Gaps = 20/263 (7%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG+G  G V+      +A D     E+A++ +   ++   ++ +N  E L  +  ++ +
Sbjct: 27  KIGQGASGTVY------TAMDVATGQEVAIRQMNLQQQPKKELIIN--EILVMRENKNPN 78

Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           +       ++  ++ + M++  G S+ D + +    +  +  + R  +Q    +  LHS 
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSN 135

Query: 169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
            ++  ++K  N+LL     + L DFG    +       S M   +GTP +MAPE    + 
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRKA 192

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVENV 287
            GP   + D W  G   +EM+ G  P+  ++ +  +Y        +   P  L     + 
Sbjct: 193 YGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249

Query: 288 IIGCFEYDLRNRPLMADIL-HAF 309
           +  C + D+  R    ++L H F
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQF 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 48.3 bits (116), Expect = 7e-06
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 24/106 (22%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  LHS  ++  +LKPSN+L++ +  L + DFG     L R +   +      T 
Sbjct: 111 QILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFG-----LARGVDPDEDEKGFLTE 165

Query: 217 N-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
                 Y APE      ++   +        D W  GC   E+LT 
Sbjct: 166 YVVTRWYRAPELLLSSSRYTKAI--------DIWSVGCIFAELLTR 203

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 48.3 bits (115), Expect = 7e-06
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 127 MKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH 185
           M++  G  GD + Q QR  K   P    Y  ++   +  LH  G++  +LK  N+LL   
Sbjct: 75  MEYVNG--GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE 132

Query: 186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSI 245
               L DFG+    +   ++ +      GTP+Y+APE  +    GP     D W  G  +
Sbjct: 133 GHCKLADFGMCKEGILNGVTTTTFC---GTPDYIAPEILQELEYGP---SVDWWALGVLM 186

Query: 246 MEMLTGIQPWFGKSVEEIYHSVV 268
            EM+ G  P+   + ++++ S++
Sbjct: 187 YEMMAGQPPFEADNEDDLFESIL 209

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 47.6 bits (113), Expect = 9e-06
 Identities = 72/314 (22%), Positives = 126/314 (40%), Gaps = 62/314 (19%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSAD--------DFDEYHEL--AVKMLLPLKEDCAKVFV 94
           L  K ++G G FG+V L       D        +  +   L  AVK+L P   D  K   
Sbjct: 7   LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRP---DANKNAR 63

Query: 95  NKF-EELFPKFRESQ-SVCWLHGISVINGKICIAMKFYE---------------GSVGDR 137
           N F +E+    R    ++  L G+ V    +C+  ++ E                     
Sbjct: 64  NDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123

Query: 138 IAQQRGGKLPLPD---ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG 194
            A      LP      +L   +Q+A G+  L S+  +  +L   N L+ E+  + + DFG
Sbjct: 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFG 183

Query: 195 IP--------YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           +         Y + GR++    + +R     +MA   WE  + G  +  +D W FG ++ 
Sbjct: 184 MSRNLYAGDYYRIQGRAV----LPIR-----WMA---WECILMGKFTTASDVWAFGVTLW 231

Query: 247 EMLT--GIQPWFGKSVEEIYHSV--VIKKEKPCIPSGLPPA----VENVIIGCFEYDLRN 298
           E+L     QP+   + E++  +     + +   +    PP     +  +++ C+  D R 
Sbjct: 232 EILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRE 291

Query: 299 RPLMADILHAFESS 312
           RP  +DI HAF + 
Sbjct: 292 RPSFSDI-HAFLTE 304

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 47.5 bits (113), Expect = 9e-06
 Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 19/115 (16%)

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
              +PLP I  Y  QL +G++  HS  +L  +LKP NLL++    + L DFG     L R
Sbjct: 94  LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG-----LAR 148

Query: 203 SLSDSDMALRLGTPN-----YMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLT 250
           +     + +R  T       Y APE     + G   + T  D W  GC   EM+T
Sbjct: 149 AFG---VPVRTYTHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 25/200 (12%)

Query: 125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE 184
           I ++F  G   D +  +    L  P I     Q  + ++ LH   ++  +LK  N+L + 
Sbjct: 79  ILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL 138

Query: 185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFG 242
              + L DFG+      R++   D    +GTP +MAPE    E     P  ++ D W  G
Sbjct: 139 DGDIKLADFGVSAKNT-RTIQRRDSF--IGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 195

Query: 243 CSIMEMLTGIQPWFGKSVEEIYHSV--------VIKKEKPCI--PSGLPPAVENVIIGCF 292
            +++EM           +E  +H +        + K E P +  PS      ++ +  C 
Sbjct: 196 ITLIEM---------AQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCL 246

Query: 293 EYDLRNRPLMADIL-HAFES 311
           E ++  R     +L H F +
Sbjct: 247 EKNVDARWTTTQLLQHPFVT 266

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI--PYLLL 200
            G +    +  +  QL KG++  HS  +L  +LKP NLL++++ +L L DFG+   + + 
Sbjct: 93  NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152

Query: 201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWF-G 257
            R  S   + L    P+ +          G   + T  D W  GC   E+    +P F G
Sbjct: 153 VRCYSAEVVTLWYRPPDVLF---------GAKLYSTSIDMWSAGCIFAELANAGRPLFPG 203

Query: 258 KSVEE 262
             V++
Sbjct: 204 NDVDD 208

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 47.5 bits (113), Expect = 1e-05
 Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 41/219 (18%)

Query: 123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL 182
           +C+ M  Y+  +   +   R G LPL   +    +L + ++ LH  G++  ++K  N+ L
Sbjct: 161 VCMVMPKYKCDLFTYV--DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL 218

Query: 183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
            E +  VLGDFG    L     +        GT    +PE    +   P   +TD W  G
Sbjct: 219 DEPENAVLGDFGAACKLDAHPDTPQCYGW-SGTLETNSPELLALD---PYCAKTDIWSAG 274

Query: 243 CSIMEMLTGIQPWFGKSVEEIYHSV-----------------------------VIKKEK 273
             + EM       FGK V+     +                              I    
Sbjct: 275 LVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRP 334

Query: 274 P-CIP-----SGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           P  IP      G+   VE +I     +D   RP   DIL
Sbjct: 335 PYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDIL 373

Length = 392

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 61/244 (25%)

Query: 38  PWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           P+ D  S  +   +IG+G FG+V+ A H ++          A+K +L   E         
Sbjct: 6   PFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIV------ALKKVLMENE--------- 50

Query: 97  FEELFP--KFRESQSVCWLHGISVIN----------------GKICIAMKFYEGSVGDRI 138
            +E FP    RE + +  L   +V+N                G   +  +F E  +   +
Sbjct: 51  -KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLA-GL 108

Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL 198
              +  K  L +I +    L  G+  +H   +L  ++K +N+L+++   L L DFG    
Sbjct: 109 LSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFG---- 164

Query: 199 LLGRSLSDSD------MALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIM 246
            L R+ S S          R+ T  Y  PE       + P    PI    D WG GC + 
Sbjct: 165 -LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGP----PI----DMWGAGCIMA 215

Query: 247 EMLT 250
           EM T
Sbjct: 216 EMWT 219

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
            P P    Y  Q+  G+  LH   ++  +LKP N+LL     + + D G+   L      
Sbjct: 94  FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK 153

Query: 206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVE 261
               A   GTP +MAPE  + E      F  D +  G ++ EM+    P+   G+ VE
Sbjct: 154 TKGYA---GTPGFMAPELLQGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 14/170 (8%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L + D++ +  Q+++G+  L  + L+  +L   N+L++E  ++ + DFG     L R + 
Sbjct: 124 LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFG-----LSRDVY 178

Query: 206 DSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + D  ++         +MA E     +    + ++D W FG  + E++T G  P+ G + 
Sbjct: 179 EEDSYVKRSKGRIPVKWMAIESLFDHI---YTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235

Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           E ++ +++    +   P      + N+++ C++ +   RP  ADI    E
Sbjct: 236 ERLF-NLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 30/171 (17%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  GI  LHS G++  +LKPSN+++     L + DFG     L R+   S M     TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 184

Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
             +      PEV   + ++   D W  GC + EM+ G   + G    + ++ V+ +   P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRP---------LMADILHAFESSQN 314
           C      L P V   +         NRP         L  D+L   +S  N
Sbjct: 245 CPEFMKKLQPTVRTYV--------ENRPKYAGYSFEKLFPDVLFPADSEHN 287

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 44/167 (26%)

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP-----------YLLLGRSLSDSDMA 210
           I  +H +G +  ++KP NLLL     + L DFG+            Y +L  +L  + + 
Sbjct: 114 IDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLD 173

Query: 211 LR------------------------LGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCS 244
                                     +GTP+Y+APE     V     +  E D W  G  
Sbjct: 174 FISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPE-----VFLQTGYNKECDWWSLGVI 228

Query: 245 IMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP--PAVENVII 289
           + EML G  P+   + +E Y  ++  KE    P  +P  P  +++I 
Sbjct: 229 MYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIK 275

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
           ++  Y  ++  G+  +H+  ++  +LKP+N+LL EH  + + D G     L    S    
Sbjct: 98  EMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG-----LACDFSKKKP 152

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
              +GT  YMAPE  +  V    S   D +  GC + ++L G  P+
Sbjct: 153 HASVGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPF 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 16/175 (9%)

Query: 139 AQQRGGKLP--LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP 196
           A+   G+ P  L ++++   ++A G++ L++   +  +L   N +++    + +GDFG  
Sbjct: 107 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-- 164

Query: 197 YLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-G 251
              + R + ++D   + G       +MAPE  +  V    S   D W FG  + E+ +  
Sbjct: 165 ---MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS---DMWSFGVVLWEITSLA 218

Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            QP+ G S E++    V+       P   P  V +++  C++++ + RP   +I+
Sbjct: 219 EQPYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 272

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 21/153 (13%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  GI  LHS G++  +LKPSN+++     L + DFG     L R+   S M     TP
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 177

Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
             +      PEV   + ++   D W  GC + EM+     + G+   + ++ V+ +   P
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           C      L P V N +         NRP  A +
Sbjct: 238 CPEFMKKLQPTVRNYV--------ENRPKYAGL 262

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 37/180 (20%)

Query: 123 ICIAMKFYEGSVGD--RIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN 179
           +C+ M +  G  G+  R+ Q Q G  L       Y  ++   +  LH +G++  +LKP N
Sbjct: 76  LCLVMDYCPG--GELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN 133

Query: 180 LLLSEHDQLVLGDFGIPYLL----------LGRSLSDSDMALRL---------------- 213
           +LL E   ++L DF +              L +    S +                    
Sbjct: 134 ILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFV 193

Query: 214 GTPNYMAPEQWEPEVRGP-ISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           GT  Y+APE     + G       D W  G  + EML G  P+ G + +E + S ++KKE
Sbjct: 194 GTEEYIAPEV----ISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF-SNILKKE 248

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 15/109 (13%)

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR--SLSDSDMALRL 213
           +QL +G+  LH   ++  +LK SNLLL++   L + DFG     L R   L    M  ++
Sbjct: 115 LQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFG-----LARTYGLPAKPMTPKV 169

Query: 214 GTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWF-GKS 259
            T  Y APE     + G  ++ T  D W  GC + E+L   +P   GKS
Sbjct: 170 VTLWYRAPEL----LLGCTTYTTAIDMWAVGCILAELLAH-KPLLPGKS 213

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 70/309 (22%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
           LK    +G G FG V L  +  + D   E   +AVK    LK +C             + 
Sbjct: 6   LKKIRVLGEGHFGKVSLYCYDPANDGTGEM--VAVK---TLKRECG-----------QQN 49

Query: 105 RESQSVCWLHGISV---------INGKIC----------IAMKFYE-GSVGDRIAQQRGG 144
                  W   I++         +  K C          + M++   GS+ D + +    
Sbjct: 50  TSG----WKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH--- 102

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRS 203
           KL L  +L +  Q+ +G++ LHS   +  +L   N+LL ++D+LV +GDFG     L ++
Sbjct: 103 KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL-DNDRLVKIGDFG-----LAKA 156

Query: 204 LSDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFG--K 258
           + +     R+   +  +P  W   E       S+ +D W FG ++ E+LT         K
Sbjct: 157 VPEGHEYYRV-REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK 215

Query: 259 SVEEIYH------------SVVIKKEK-PCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
             EE+               ++ +  + PC P   P  V  ++  C+E + + RP    +
Sbjct: 216 KFEEMIGPKQGQMTVVRLIELLERGMRLPC-PKNCPQEVYILMKNCWETEAKFRPTFRSL 274

Query: 306 LHAFESSQN 314
           +   +   +
Sbjct: 275 IPILKEMHH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 33/121 (27%), Positives = 46/121 (38%), Gaps = 22/121 (18%)

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG--------IP 196
           KL    I  Y +QL +GI+ LH   +L  ++K +N+L+     L + DFG         P
Sbjct: 111 KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPP 170

Query: 197 YLLLGRSLSDSDMALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLT 250
               G           + T  Y  PE      ++   V        D WG GC   EM T
Sbjct: 171 NPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV--------DIWGIGCVFAEMFT 222

Query: 251 G 251
            
Sbjct: 223 R 223

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP-------Y 197
           KLPL  +L++ + +A G+  L +   +  +L   N +L E   + + DFG+        Y
Sbjct: 109 KLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY 168

Query: 198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF 256
              GR    + M ++     ++A E     V    S   D W FG ++ E+ T G  P+ 
Sbjct: 169 YRQGRI---AKMPVK-----WIAIESLADRVYTSKS---DVWAFGVTMWEIATRGQTPYP 217

Query: 257 GKSVEEIY----HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           G    EIY    H   +K+ + C        + +++  C+  D ++RP
Sbjct: 218 GVENHEIYDYLRHGNRLKQPEDC-----LDELYDLMYSCWRADPKDRP 260

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 34/226 (15%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  L K   +IG G  G+V+ AT   +        E+A+K +  L++   ++ +N+   
Sbjct: 16  DPRELYKNLEKIGEGASGEVYKATDRATGK------EVAIKKM-RLRKQNKELIINEILI 68

Query: 100 LFPKFRESQSV-------CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDI 151
           +    ++ +          +L     +  ++ + M++ + GS+ D I Q    ++  P I
Sbjct: 69  M----KDCKHPNIVDYYDSYL-----VGDELWVVMEYMDGGSLTDIITQNFV-RMNEPQI 118

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
                ++ +G+  LHS  ++  ++K  N+LLS+   + L DFG    L       + +  
Sbjct: 119 AYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV-- 176

Query: 212 RLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWF 256
            +GTP +MAPE     ++      + D W  G   +EM  G  P+ 
Sbjct: 177 -VGTPYWMAPEV----IKRKDYGPKVDIWSLGIMCIEMAEGEPPYL 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 45.6 bits (108), Expect = 5e-05
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  +L   I  +H +G +  ++KP N+L+     + L DFG    L    + +S +   +
Sbjct: 107 YLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP--V 164

Query: 214 GTPNYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
           GTP+Y+APE       + +G    E D W  G    EM+ G  P+   +  + Y++++  
Sbjct: 165 GTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF 224

Query: 271 KE 272
           + 
Sbjct: 225 QR 226

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 45.0 bits (106), Expect = 6e-05
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 17/128 (13%)

Query: 144 GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS 203
            +L   D++    Q+A+G+  L S   +  +L   N+L++E + + + DFG     L R 
Sbjct: 129 EQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFG-----LARG 183

Query: 204 LSDSDMALRLGTPN------YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF 256
           + D D   +  T N      +MAPE     V    + ++D W FG  + E+ T G  P+ 
Sbjct: 184 VHDIDYYKK--TSNGRLPVKWMAPEALFDRV---YTHQSDVWSFGILMWEIFTLGGSPYP 238

Query: 257 GKSVEEIY 264
           G  VEE++
Sbjct: 239 GIPVEELF 246

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 45.0 bits (106), Expect = 6e-05
 Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 21/278 (7%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I P+ +  +  IG G FG+V+            +   +A+K L P   +  +        
Sbjct: 2   IHPSHITKQKVIGAGEFGEVFRGILKMPGR---KEVAVAIKTLKPGYTEKQRQDFLSEAS 58

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGK---LPLPDILRYGI 156
           +  +F    ++  L G+        I  ++ E    D+  +   G+     L  +LR GI
Sbjct: 59  IMGQFSH-HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR-GI 116

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
             A G+  L  +  +  +L   N+L++ + +  + DFG     L R L D D      T 
Sbjct: 117 --AAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFG-----LSRVLED-DPEGTYTTS 168

Query: 217 NYMAPEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
               P +W  PE      F +  D W FG  + E+++ G +P++  S  E+  ++     
Sbjct: 169 GGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFR 228

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            P  P   P AV  +++ C++ D   RP   DI++  +
Sbjct: 229 LPA-PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 7e-05
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 24/113 (21%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS-LSDSD----MAL 211
           Q+ +G+  +HS  +L  +LKPSNLLL+ +  L + DFG     L R    + D    +  
Sbjct: 114 QILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFG-----LARIADPEHDHTGFLTE 168

Query: 212 RLGTPNYMAPEQWEPEVRGPISFET-----DTWGFGCSIMEMLTGIQPWF-GK 258
            + T  Y APE         ++ +      D W  GC + EML+  +P F GK
Sbjct: 169 YVATRWYRAPEIM-------LNSKGYTKAIDIWSVGCILAEMLSN-RPLFPGK 213

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 44.6 bits (106), Expect = 7e-05
 Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 26/276 (9%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           IDP+ + ++  IG G FG+V             +  ++A+K L     D  ++       
Sbjct: 1   IDPSYVTIEKVIGGGEFGEVCRGRLKLP---GKKEIDVAIKTLKAGSSDKQRLDFLTEAS 57

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR--YGIQ 157
           +  +F    ++  L G+   +  + I  ++ E    D+  ++  GK  +  ++    GI 
Sbjct: 58  IMGQFDHP-NIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGI- 115

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
            A G+  L  +  +  +L   N+L++ +    + DFG     L R L DS+      T  
Sbjct: 116 -ASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFG-----LSRRLEDSE-----ATYT 164

Query: 218 YMA---PEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIK 270
                 P +W  PE      F +  D W FG  + E+++ G +P++  S +++  +V   
Sbjct: 165 TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG 224

Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
              P  P   P A+  +++ C++ D   RP  + I+
Sbjct: 225 YRLPP-PMDCPSALYQLMLDCWQKDRNERPTFSQIV 259

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 44.3 bits (104), Expect = 1e-04
 Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 22/173 (12%)

Query: 147 PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD 206
            L  +++   ++A G++ L++   +  +L   N +++E   + +GDFG     + R + +
Sbjct: 117 SLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG-----MTRDIYE 171

Query: 207 SDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
           +D   + G       +M+PE  +    G  +  +D W FG  + E+ T   QP+ G S E
Sbjct: 172 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE 228

Query: 262 EIYHSV----VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           ++   V    ++ K     P   P  +  ++  C++Y+ + RP   +I+ + +
Sbjct: 229 QVLRFVMEGGLLDK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 18/76 (23%), Positives = 36/76 (47%)

Query: 235 ETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
           + D +  G  + E+ TG  P+   + +EIY  ++ K     +P   P  ++ ++  C  +
Sbjct: 202 KDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSH 261

Query: 295 DLRNRPLMADILHAFE 310
           D   RP + +IL+   
Sbjct: 262 DSIKRPNIKEILYNLS 277

Length = 283

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 11/124 (8%)

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL 204
           ++   D++    Q+A+G+  L S   +  +L   N+L++E++ + + DFG     L R +
Sbjct: 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-----LARDV 187

Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           ++ D   +  T N   P +W  PE       + ++D W FG  + E+ T G  P+ G  V
Sbjct: 188 NNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245

Query: 261 EEIY 264
           EE++
Sbjct: 246 EELF 249

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 58/299 (19%)

Query: 41  DPT-SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DPT + ++   IG+G +G V+  T+ +           AVK+L P+ +          EE
Sbjct: 19  DPTDTWEIIETIGKGTYGKVYKVTNKKDGS------LAAVKILDPISD--------VDEE 64

Query: 100 LFPKFRESQS------VCWLHGI-----SVINGKICIAMKFYEG-SVGDRIAQ--QRGGK 145
           +  ++   QS      V   +G+      ++ G++ + ++   G SV + +      G +
Sbjct: 65  IEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQR 124

Query: 146 LPLPDI--LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS 203
           L    I  + YG  L  G+  LH+  ++  ++K +N+LL+    + L DFG+   L    
Sbjct: 125 LDEAMISYILYGALL--GLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR 182

Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWFGKSVE 261
           L  +     +GTP +MAPE    E +   S++   D W  G + +E+  G  P F     
Sbjct: 183 LRRNT---SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFD---- 235

Query: 262 EIYHSVVIKKEKPCIPSGLPPAVEN----------VIIGCFEYDLRNRPLMADIL-HAF 309
              H V   K    IP   PP + +           I  C   D   RP +  +L H F
Sbjct: 236 --MHPV---KTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 65/302 (21%), Positives = 128/302 (42%), Gaps = 59/302 (19%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL----------AVKMLLPLKEDCAKVFV 94
           L  K ++G G FG+V L          D+   L          AVKML   +ED  K   
Sbjct: 7   LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKML---REDANKNAR 63

Query: 95  NKFEE---LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD-------RIAQQRGG 144
           N F +   +  + ++  ++  L  + + +  +C+  ++ E   GD          Q+   
Sbjct: 64  NDFLKEIKIMSRLKDP-NIIRLLAVCITSDPLCMITEYMEN--GDLNQFLSRHEPQEAAE 120

Query: 145 KLPLPDI----LRY-GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP--- 196
           K  +  I    L +   Q+A G+  L S+  +  +L   N L+ ++  + + DFG+    
Sbjct: 121 KADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL 180

Query: 197 -----YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
                Y + GR++    + +R     +M+   WE  + G  +  +D W FG ++ E+LT 
Sbjct: 181 YSGDYYRIQGRAV----LPIR-----WMS---WESILLGKFTTASDVWAFGVTLWEILTL 228

Query: 252 I--QPWFGKSVEEIYHSV--VIKKEKPCI----PSGLPPAVENVIIGCFEYDLRNRPLMA 303
              QP+   S E++  +     + +   +    P+  P ++  +++ C+  + + RP   
Sbjct: 229 CKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQ 288

Query: 304 DI 305
           +I
Sbjct: 289 EI 290

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 27/117 (23%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR-SLSDSDMAL---- 211
           QL + +  +H+  +   +LKP N+L +   +L + DFG     L R + +D+  A+    
Sbjct: 111 QLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFG-----LARVAFNDTPTAIFWTD 165

Query: 212 RLGTPNYMAPE-------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSV 260
            + T  Y APE       ++ P +        D W  GC   E+LTG +P F GK+V
Sbjct: 166 YVATRWYRAPELCGSFFSKYTPAI--------DIWSIGCIFAEVLTG-KPLFPGKNV 213

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 27/193 (13%)

Query: 132 GSVGDRIAQ--QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV 189
           GSV D +    +RG ++  P I     +   G+  LH    +  ++K +N+LL+    + 
Sbjct: 105 GSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVK 164

Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIME 247
           L DFG+   L    L  +     +GTP +MAPE    E +   +++   D W  G + +E
Sbjct: 165 LVDFGVSAQLTSTRLRRNT---SVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE 221

Query: 248 MLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE----------NVIIGCFEYDLR 297
           +  G  P     + +++    + K    IP   PP +           + I  C   D  
Sbjct: 222 LGDGDPP-----LADLHPMRALFK----IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYE 272

Query: 298 NRPLMADIL-HAF 309
            RP ++D+L H F
Sbjct: 273 KRPTVSDLLQHVF 285

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  GI  LHS G++  +LKPSN+++     L + DFG     L R+   + M     TP
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTACTNFMM----TP 181

Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTG 251
             +      PEV   + ++   D W  GC + E++ G
Sbjct: 182 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 12/163 (7%)

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
           +L + +Q+AKG++ L    L+  +L   N+L+     + + DFG+  LL      + +  
Sbjct: 111 LLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GADEKEYH 167

Query: 211 LRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              G      P +W   E  +    + ++D W +G ++ E++T G +P+ G    EI  S
Sbjct: 168 AEGGK----VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SS 222

Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
           ++ K E+   P      V  +++ C+  D  +RP   +++  F
Sbjct: 223 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 265

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 64/287 (22%), Positives = 106/287 (36%), Gaps = 51/287 (17%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLA---THHQSA-----------DDFDEYHELAVKMLLPL 85
           I+P+ L     +G G FG V L       + A           +DF E  ++ +K+  P 
Sbjct: 1   INPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHP- 59

Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGK 145
                                   +  L+G+      + I  +F E        +QR GK
Sbjct: 60  -----------------------KLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK 96

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L    +L     + +G+  L     +  +L   N L+S    + + DFG+   +L    +
Sbjct: 97  LSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156

Query: 206 DSDMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
            S  A          P +W  PEV      S ++D W FG  + E+ T G  P+  KS  
Sbjct: 157 SSSGA--------KFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY 208

Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHA 308
           E+   ++ +  +   P      V  V+  C+      RP  A++L A
Sbjct: 209 EVV-EMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 15/166 (9%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS-L 204
           L L D+LR+  Q+A+G+  L S   +  ++   N+LL++     + DFG     L R  +
Sbjct: 209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFG-----LARDIM 263

Query: 205 SDSDMAL----RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS 259
           +DS+  +    RL    +MAPE     V    + ++D W +G  + E+ + G  P+ G  
Sbjct: 264 NDSNYVVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGKSPYPGIL 319

Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           V   ++ +V +  +   P   PP + +++  C+  +   RP  + I
Sbjct: 320 VNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQI 365

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL 204
            L  P I  Y  QL +GI+  HS  +L  +LKP NLL+     L L DFG     L R+ 
Sbjct: 95  GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFG-----LARAF 149

Query: 205 SDSDMALRLGTPN-----YMAPEQWEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWF- 256
               + +R  T       Y APE     + G   + T  D W  GC   EM+   +P F 
Sbjct: 150 G---VPVRTYTHEVVTLWYRAPEI----LLGSRQYSTPVDIWSIGCIFAEMVNR-RPLFP 201

Query: 257 GKS-VEEIY 264
           G S +++++
Sbjct: 202 GDSEIDQLF 210

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 42.3 bits (99), Expect = 5e-04
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 17/127 (13%)

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL 204
           +L   D++    Q+A+G+  L S   +  +L   N+L++E + + + DFG     L R +
Sbjct: 130 QLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFG-----LARDV 184

Query: 205 SDSDMALRLGTPN------YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFG 257
            + D   +  T N      +MAPE     V    + ++D W FG  + E+ T G  P+ G
Sbjct: 185 HNIDYYKK--TTNGRLPVKWMAPEALFDRV---YTHQSDVWSFGVLLWEIFTLGGSPYPG 239

Query: 258 KSVEEIY 264
             VEE++
Sbjct: 240 IPVEELF 246

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 42.0 bits (98), Expect = 5e-04
 Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 12/163 (7%)

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
           +L + +Q+AKG+  L    L+  +L   N+L+   + + + DFG+  LL G     +   
Sbjct: 111 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 170

Query: 211 LRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
            ++       P +W   E       + ++D W +G +I E++T G +P+ G    EI   
Sbjct: 171 GKM-------PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PD 222

Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
           ++ K E+   P      V  V++ C+  D  +RP   ++   F
Sbjct: 223 LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 265

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 42.3 bits (99), Expect = 7e-04
 Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 13/175 (7%)

Query: 131 EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL 190
           +  V + ++      L   D+L +  Q+A+G+  L S   +  +L   N+LL++   + +
Sbjct: 219 DSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKI 278

Query: 191 GDFGIPYLLLGRS-LSDSDMALRLGT---PNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
            DFG     L R  + DS+   +  T     +MAPE     +   +S   D W +G  + 
Sbjct: 279 CDFG-----LARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLS---DVWSYGILLW 330

Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           E+ + G  P+ G  V+  +++ +    +   P      V ++++ C+  +   RP
Sbjct: 331 EIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRP 385

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 42.4 bits (99), Expect = 8e-04
 Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 40/235 (17%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G FG+V+L  H ++  +F  +  ++ + L   ++    + VN   EL    +    
Sbjct: 20  KIGNGRFGEVFLVKHKRT-QEFFCWKAISYRGLKEREKSQLVIEVNVMREL----KHKNI 74

Query: 110 VCWL-HGISVINGKICIAMKFYEGSVGDRIAQQ---RGGKLPLPDILRYGIQLAKGISDL 165
           V ++   ++  N K+ I M+F +     R  Q+     GK+    I+    QL   ++  
Sbjct: 75  VRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYC 134

Query: 166 HSI-----GLLVL--NLKPSNLLLSEHDQLV-----------------LGDFGIPYLLLG 201
           H++     G  VL  +LKP N+ LS   + +                 +GDFG     L 
Sbjct: 135 HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFG-----LS 189

Query: 202 RSLSDSDMALR-LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
           +++    MA   +GTP Y +PE    E +     ++D W  GC I E+ +G  P+
Sbjct: 190 KNIGIESMAHSCVGTPYYWSPELLLHETKS-YDDKSDMWALGCIIYELCSGKTPF 243

Length = 1021

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 41.5 bits (97), Expect = 8e-04
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 11/123 (8%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L   D++    Q+A+G+  L S   +  +L   N+L++E + + + DFG     L R + 
Sbjct: 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIH 191

Query: 206 DSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
             D   +  T N   P +W  PE       + ++D W FG  + E+ T G  P+ G  VE
Sbjct: 192 HIDYYKK--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249

Query: 262 EIY 264
           E++
Sbjct: 250 ELF 252

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 41.6 bits (98), Expect = 9e-04
 Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 19/101 (18%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  GI  LHS G++  +LKPSN+++     L + DFG     L R+   S M     TP
Sbjct: 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 176

Query: 217 N-----YMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTG 251
                 Y APE     + G       D W  GC + EM+ G
Sbjct: 177 YVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMGEMIRG 213

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 11/106 (10%)

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           LP   I     Q  +G+  LH+  ++  +LKP N+L++   Q+ L DFG     L R  S
Sbjct: 105 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG-----LARIYS 159

Query: 206 DSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEML 249
              MAL   TP  +      PEV    ++ T  D W  GC   EM 
Sbjct: 160 -CQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 41.3 bits (97), Expect = 0.001
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 16/101 (15%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD----MALR 212
           Q+ +G+  LHS G+L  ++KP NLL++ +  L + DFG     L R + + D    M   
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFG-----LAR-VEEPDESKHMTQE 164

Query: 213 LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
           + T  Y APE           +    D W  GC   E+L  
Sbjct: 165 VVTQYYRAPEILMGSRHYTSAV----DIWSVGCIFAELLGR 201

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
            QL +G+  LHS  ++  +LKP N+L++   Q+ L DFG+  +   +    S +     T
Sbjct: 117 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV----T 172

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
             Y APE     ++   +   D W  GC   EM 
Sbjct: 173 LWYRAPEVL---LQSSYATPVDLWSVGCIFAEMF 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 39/288 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFE 98
           ID + +K++  IG G FG+V             E   +A+K L     E   + F+++  
Sbjct: 1   IDVSCVKIEEVIGAGEFGEVCRGRLKLPGKR--EIF-VAIKTLKSGYTEKQRRDFLSE-A 56

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP---LPDILRYG 155
            +  +F +  ++  L G+   +  + I  +F E    D   +Q  G+     L  +LR G
Sbjct: 57  SIMGQF-DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR-G 114

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           I  A G+  L  +  +  +L   N+L++ +    + DFG     L R L D         
Sbjct: 115 I--AAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFG-----LSRFLEDDT-----SD 162

Query: 216 PNYMA------PEQWE-PEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEE 262
           P Y +      P +W  PE    I++      +D W +G  + E+++ G +P++  S ++
Sbjct: 163 PTYTSSLGGKIPIRWTAPEA---IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 219

Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           + +++      P  P   P A+  +++ C++ D   RP    I+   +
Sbjct: 220 VINAIEQDYRLPP-PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 56/269 (20%), Positives = 104/269 (38%), Gaps = 29/269 (10%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE--ELFPKFRESQ 108
           +G+G F +++       +D         V ++L +     +  +  FE   L  +     
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
            V  L+G+ V +  I +  ++ +    D    +    + L   L    QLA  +  L   
Sbjct: 63  LV-KLYGVCVRDENI-MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK 120

Query: 169 GLLVLNLKPSNLLLSEHDQ-------LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
            L+  N+   N+L++ +         + L D GIP  +L R      +        ++AP
Sbjct: 121 KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIP-------WIAP 173

Query: 222 EQWEPEVRGPISFET---DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           E     +R   +  T   D W FG +++E+ + G +P    S  E        +++  +P
Sbjct: 174 EC----IRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER---FYQDQHRLP 226

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADIL 306
                 + N+I  C+ YD   RP    IL
Sbjct: 227 MPDCAELANLINQCWTYDPTKRPSFRAIL 255

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 0.002
 Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 57/208 (27%)

Query: 132 GSVGDRIAQQRGGKLPLPD-----ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD 186
           GSV D +   R     L +     ILR   +  +G++ LH   ++  ++K  N+LL+++ 
Sbjct: 94  GSVTDLVKGLRKKGKRLKEEWIAYILR---ETLRGLAYLHENKVIHRDIKGQNILLTKNA 150

Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMAPE------QWEPEVRGPISFETD 237
           ++ L DFG+   L      DS +  R   +GTP +MAPE      Q +          +D
Sbjct: 151 EVKLVDFGVSAQL------DSTLGRRNTFIGTPYWMAPEVIACDEQPDAS----YDARSD 200

Query: 238 TWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-----IPSGLPPAV-------- 284
            W  G + +E+  G  P                   P      IP   PP +        
Sbjct: 201 VWSLGITAIELADGKPPLC--------------DMHPMRALFKIPRNPPPTLKSPENWSK 246

Query: 285 --ENVIIGCFEYDLRNRPLMADIL-HAF 309
              + I  C   +   RP M ++L H F
Sbjct: 247 KFNDFISECLIKNYEQRPFMEELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 40.5 bits (95), Expect = 0.002
 Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 19/109 (17%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  G++ LH    +  +L P+N+ ++      + DFG     L R       +  L   
Sbjct: 127 QILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG-----LARRYGYPPYSDTLSKD 181

Query: 217 NYMAP-EQWEPEV-----RGP--------ISFETDTWGFGCSIMEMLTG 251
             M   E+   +V     R P          F  D W  GC   E+LTG
Sbjct: 182 ETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230

Length = 335

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 58/283 (20%), Positives = 108/283 (38%), Gaps = 82/283 (28%)

Query: 150 DILRYGI-QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY----------- 197
           D+ R+ + +    I  +H +G +  ++KP N+L+     + L DFG+             
Sbjct: 101 DVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160

Query: 198 --LLLGRS-------------------LSDSD-----------MALR-LGTPNYMAPEQW 224
             LL G+S                   +S  D           MA   +GTP+Y+APE +
Sbjct: 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIF 220

Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG--LPP 282
             +  G    E D W  G  + E L G  P+  ++  E Y  ++  +E    P    L  
Sbjct: 221 LQQGYG---QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSV 277

Query: 283 AVENVIIGCFEYDLRNRPLMADILH------AFESSQNAVYNDGEWTGLGS--------- 327
             E++I          R L+ +  +      A E   +  +   +W  +           
Sbjct: 278 EAEDLI----------RRLITNAENRLGRGGAHEIKSHPFFRGVDWDTIRQIRAPFIPQL 327

Query: 328 RALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQTVD 370
           +++TDTS       ++P  +  QV +    ++   A++ ++V+
Sbjct: 328 KSITDTS-------YFPTDELEQVPEAPALKQAAPAQQEESVE 363

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 26/122 (21%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS------DSDMA 210
           Q+  G+  +HS  +L  +LKP NLL++   +L + DFG     L R  S         M 
Sbjct: 113 QILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFG-----LARGFSENPGENAGFMT 167

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFET-----DTWGFGCSIMEMLTGIQPWF-GK-SVEEI 263
             + T  Y APE         +SF++     D W  GC + E+L G +P F GK  V+++
Sbjct: 168 EYVATRWYRAPEIM-------LSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKDYVDQL 219

Query: 264 YH 265
             
Sbjct: 220 NQ 221

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q++ G+  L     +  +L   N+LL       + DFG     L ++L   +   +  T 
Sbjct: 103 QVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFG-----LSKALGADENYYKAKTH 157

Query: 217 NYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKK-E 272
                + + PE      F  ++D W FG  + E  + G +P+ G    E+  + +I+  E
Sbjct: 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV--TQMIESGE 215

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           +   P   PP + +++  C+ Y +  RP
Sbjct: 216 RMECPQRCPPEMYDLMKLCWTYGVDERP 243

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 40.2 bits (94), Expect = 0.004
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 40/182 (21%)

Query: 157 QLAKGISD----LH---SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
           ++A GI+     LH   S  ++V NL P  +++   D+        P+L L         
Sbjct: 784 KIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE--------PHLRLSLPGLLCTD 835

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
                +  Y+APE  E      I+ ++D +GFG  ++E+LTG  P      E   H  ++
Sbjct: 836 TKCFISSAYVAPETRE---TKDITEKSDIYGFGLILIELLTGKSP---ADAEFGVHGSIV 889

Query: 270 KKEKPC-----IPSGLPPAVE--------------NVIIGCFEYDLRNRPLMADILHAFE 310
           +  + C     +   + P++               N+ + C   D   RP   D+L   E
Sbjct: 890 EWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949

Query: 311 SS 312
           S+
Sbjct: 950 SA 951

Length = 968

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 39.6 bits (92), Expect = 0.004
 Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 9/164 (5%)

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS--LSDS 207
           D++ +  Q+A G+  L S   +  +L   N+L+ E   + + DFG+   ++  S  +S  
Sbjct: 240 DLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKG 299

Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              L L    +MAPE     +   +S   D W FG  + E+ T G  P+    + E +++
Sbjct: 300 STFLPL---KWMAPESIFNNLYTTLS---DVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353

Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            + +  +   P+     +  ++  C+E     RP  + ++H   
Sbjct: 354 AIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 44/160 (27%)

Query: 150 DILRYGI-QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI----------PYL 198
           D+ R+ I +L   I  +H +G +  ++KP N+L+     + L DFG+           Y 
Sbjct: 101 DLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160

Query: 199 LLGR-----SLSDSD-----MALRL--------------------GTPNYMAPEQWEPEV 228
             G      S+  S+        RL                    GTPNY+APE      
Sbjct: 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL--- 217

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
           R   +   D W  G  + EML G  P+   +  E    V+
Sbjct: 218 RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVI 257

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	632
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.98
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.98
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.94
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.89
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.86
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.85
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.82
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.82
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.81
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.8
PRK12274	218	serine/threonine protein kinase; Provisional	99.78
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.78
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.76
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.73
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.7
PRK10345	210	hypothetical protein; Provisional	99.69
smart00090	237	RIO RIO-like kinase.	99.67
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.64
PRK14879	211	serine/threonine protein kinase; Provisional	99.61
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.59
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.58
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.57
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.57
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.57
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.5
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.48
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.43
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.31
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.3
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.15
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.04
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.02
COG4248	637	Uncharacterized protein with protein kinase and he	98.93
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.93
KOG3087	229	consensus Serine/threonine protein kinase [General	98.86
KOG1243	690	consensus Protein kinase [General function predict	98.82
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.75
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.71
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.69
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.65
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.59
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.55
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.34
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.29
PRK09902	216	hypothetical protein; Provisional	98.13
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.12
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.95
PF01636	239	APH: Phosphotransferase enzyme family This family	97.83
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.83
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.83
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.78
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.67
PLN02876	822	acyl-CoA dehydrogenase	97.48
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.4
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.27
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.22
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.16
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.07
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.77
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.68
PRK05231	319	homoserine kinase; Provisional	96.68
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.41
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.38
PRK10593	297	hypothetical protein; Provisional	96.24
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.1
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.01
KOG2268	465	consensus Serine/threonine protein kinase [Signal	95.87
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.76
PLN02236	344	choline kinase	95.52
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.19
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.67
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.55
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	94.34
KOG2270	520	consensus Serine/threonine protein kinase involved	94.05
PLN02756	418	S-methyl-5-thioribose kinase	93.86
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	93.04
PTZ00384	383	choline kinase; Provisional	92.4
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	92.1
PRK12396	409	5-methylribose kinase; Reviewed	91.7
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	91.65
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.4
PRK11768	325	serine/threonine protein kinase; Provisional	90.25
KOG1093	725	consensus Predicted protein kinase (contains TBC a	90.17
KOG1236	565	consensus Predicted unusual protein kinase [Genera	89.51
PRK06148	1013	hypothetical protein; Provisional	89.08
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	89.03
PRK10271	188	thiK thiamine kinase; Provisional	84.68
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	84.64
smart00743	61	Agenet Tudor-like domain present in plant sequence	82.8
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	81.94
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	80.55

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-51  Score=426.30  Aligned_cols=281  Identities=22%  Similarity=0.355  Sum_probs=237.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+.+++|++.+.||+|+||+||+++.+.++      +.+|+|++++...  .........+..++.. .+||+|+.++.
T Consensus        20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~------kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~-v~hPFiv~l~y   92 (357)
T KOG0598|consen   20 EMVGPDDFEILKVIGKGSFGKVFQVRKKDTG------KIYAMKVLKKKKIVEKKEVRHTKAERNILSK-IKHPFIVKLIY   92 (357)
T ss_pred             ccCChhheeeeeeeeccCCceEEEEEEcccC------ceeehhhhhhhHhhhhhhHHHHHHHHHHHHh-CCCCcEeeeEE
Confidence            4567899999999999999999999988655      5899999987432  2223334445566666 58999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      .|++.+.+|||+||+.| .|.-.+.+  .+.|++..++.|+.+|+.||.|||++|||||||||+|||||..|+++|+|||
T Consensus        93 sFQt~~kLylVld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFg  170 (357)
T KOG0598|consen   93 SFQTEEKLYLVLDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFG  170 (357)
T ss_pred             ecccCCeEEEEEeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccc
Confidence            99999999999999996 66655543  4689999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....   .....++|||+.|||||++...   +|+.++||||||+++|||++|.+||.+.+..+++..|.... .+
T Consensus       171 L~k~~~~~---~~~t~tfcGT~eYmAPEil~~~---gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~  243 (357)
T KOG0598|consen  171 LCKEDLKD---GDATRTFCGTPEYMAPEILLGK---GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LP  243 (357)
T ss_pred             cchhcccC---CCccccccCCccccChHHHhcC---CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CC
Confidence            99865332   2234558999999999999854   79999999999999999999999999999999998887432 35


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCC----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCCC
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPL----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYT  340 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  340 (632)
                      ..|..++.+.+++++++|.+||++|..    +.+|.+      +++|.+++|+.+..+.+.+|+.|....
T Consensus       244 ~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~------HpfF~~inW~~l~~k~l~PpF~P~~~~  307 (357)
T KOG0598|consen  244 LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR------HPFFKGINWEKLLAKKLSPPFKPNVTG  307 (357)
T ss_pred             CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc------CcccccCCHHHHHhcCCCCCeecCCCC
Confidence            556779999999999999999999974    344332      789999999999999999999886544

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-50  Score=441.45  Aligned_cols=279  Identities=22%  Similarity=0.332  Sum_probs=243.6

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .++.++|++++.||+|+||+|++|..+.+++      .+|||++++..   .+..+. ...+..++..+..||+++.++.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e------~yAIK~LKK~~Il~~d~Ve~-~~~EkrI~~la~~HPFL~~L~~  436 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNE------YYAIKVLKKGDILQRDEVES-LMCEKRIFELANRHPFLVNLFS  436 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCc------EEEEEEeeccceeccccHHH-HHHHHHHHHHhccCCeEeeccc
Confidence            6788999999999999999999999998774      89999998843   233222 3334466666679999999999


Q ss_pred             EEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          116 ISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .|++.+++|+||||+.|+.  ++.....+.|++..++.|+++|+.||.|||++||||||||.+|||||.+|++||+|||+
T Consensus       437 ~fQT~~~l~fvmey~~Ggd--m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGl  514 (694)
T KOG0694|consen  437 CFQTKEHLFFVMEYVAGGD--LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGL  514 (694)
T ss_pred             ccccCCeEEEEEEecCCCc--EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccc
Confidence            9999999999999999854  44444457999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +|....   ....++++||||.|||||++.+.   .|+.++|||||||+|||||.|+.||.|++.++++..|+  ...+.
T Consensus       515 cKe~m~---~g~~TsTfCGTpey~aPEil~e~---~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~--~d~~~  586 (694)
T KOG0694|consen  515 CKEGMG---QGDRTSTFCGTPEFLAPEVLTEQ---SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV--NDEVR  586 (694)
T ss_pred             ccccCC---CCCccccccCChhhcChhhhccC---cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh--cCCCC
Confidence            986543   23356789999999999999854   79999999999999999999999999999999999988  67888


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcCCCCC
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYT  340 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  340 (632)
                      +|..++.+..++|+++|.+||++|..+     .+|..      ++||..++|+.+..+.+.||+.|...+
T Consensus       587 yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~------hpFFr~i~w~~L~~r~i~PPf~P~i~~  650 (694)
T KOG0694|consen  587 YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKK------HPFFRSIDWDDLLNRRIKPPFVPTIKG  650 (694)
T ss_pred             CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhh------CCccccCCHHHHhhccCCCCCCcccCC
Confidence            999999999999999999999999966     34443      889999999999999999999887544

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1e-48  Score=393.10  Aligned_cols=271  Identities=23%  Similarity=0.379  Sum_probs=234.2

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ...++|++++.||.|+||.|.+++++.++      ..+|+|++.+...-  ...+....+..+++.+ .||+++.+++.+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g------~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~  113 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSG------NYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTF  113 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCC------ceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEee
Confidence            67899999999999999999999998765      48999999764322  2222233344555555 599999999999


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+.+.+|+||||.+| .|..++.+  .++|+++.+++|++||+.||+|||+++|++|||||+|||||++|++||+|||+|
T Consensus       114 ~d~~~lymvmeyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFA  191 (355)
T KOG0616|consen  114 KDNSNLYMVMEYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFA  191 (355)
T ss_pred             ccCCeEEEEEeccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccce
Confidence            999999999999995 66666643  469999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      +.+.+      .+.+.||||.|+|||++...   +|..++||||||+++|||+.|.+||...++.++++.|..  ....+
T Consensus       192 K~v~~------rT~TlCGTPeYLAPEii~sk---~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~--~~v~f  260 (355)
T KOG0616|consen  192 KRVSG------RTWTLCGTPEYLAPEIIQSK---GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE--GKVKF  260 (355)
T ss_pred             EEecC------cEEEecCCccccChHHhhcC---CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh--CcccC
Confidence            98743      35678999999999999854   788999999999999999999999999999999999884  56668


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      |+.+++++++|+.++|+.|-.+|.     ...+|.+      +++|.+.+|+.+..+.+.+|+.|
T Consensus       261 P~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~------H~wF~~v~W~~i~~r~ie~P~~p  319 (355)
T KOG0616|consen  261 PSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKN------HPWFKGVDWEAILQRKIEPPFEP  319 (355)
T ss_pred             CcccCHHHHHHHHHHHhhhhHhhhcCcCCCcccccc------CcccccccHHHHhhccccCCCCC
Confidence            999999999999999999999994     2334443      77999999999999999999877

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-48  Score=414.85  Aligned_cols=271  Identities=22%  Similarity=0.370  Sum_probs=237.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .-.+.||.+++.||+|+|++|++|+.+.++      ++||||++.+.-  .+.....+..+...+.++.+||.|++|+..
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~------keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T  142 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATG------KEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT  142 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCC------ceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE
Confidence            556789999999999999999999998766      599999996532  222334456666778888899999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      |+++..+|+|+||++ |+|+++|.+.  +.|++..++.|++||+.||+|||++|||||||||+|||||.++++||+|||.
T Consensus       143 FQD~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGs  220 (604)
T KOG0592|consen  143 FQDEESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGS  220 (604)
T ss_pred             eecccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccc
Confidence            999999999999998 8999999765  7999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCC----------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH
Q 006772          196 PYLLLGRSLS----------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH  265 (632)
Q Consensus       196 ak~~~~~~~~----------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~  265 (632)
                      |+.+......          .....+++||..|.+||++..   +..+..+|+|+|||+||+|+.|.+||.+.+...+++
T Consensus       221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~---~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq  297 (604)
T KOG0592|consen  221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND---SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ  297 (604)
T ss_pred             cccCChhhccccCccCcccccCcccceeeeecccCHHHhcC---CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence            9987543221          122256899999999999974   467889999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccc
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSR  328 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~  328 (632)
                      .|+  .....+|+..|+.+.+||.++|..||.+|++..+|.+      ++||.+++|+.+...
T Consensus       298 kI~--~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~------HpFF~~Vdw~nlw~~  352 (604)
T KOG0592|consen  298 KIQ--ALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA------HPFFEGVDWENLWQQ  352 (604)
T ss_pred             HHH--HhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhh------CcccccCChhhhhhc
Confidence            987  5677789999999999999999999999999988877      889999999996643

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5.7e-47  Score=405.71  Aligned_cols=281  Identities=23%  Similarity=0.351  Sum_probs=231.3

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      +.+..++|++++.||+|+||.||+|+.+.+++      .+|+|+|++...   ..... ++.++.++.. ..++.|++|+
T Consensus       136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~------iyAmK~LkKS~M~~~~Qv~h-V~aERdiL~~-~ds~~vVKLy  207 (550)
T KOG0605|consen  136 TRLSLDDFELLKVIGKGAFGEVRLARKKDTGE------IYAMKILKKSEMLKKNQVEH-VRAERDILAE-VDSPWVVKLY  207 (550)
T ss_pred             ccCCcccchhheeeccccceeEEEEEEccCCc------EEeeecccHHHHHhhhhHHH-HHHHHHHhhh-cCCCcEEEEE
Confidence            46788999999999999999999999887764      899999987543   22222 3344455555 6899999999


Q ss_pred             EEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      ..|++.+++||||||++| ++..++.+  .+.|++..+++|+.+++.||+.||+.|+|||||||+|+|||..|++||+||
T Consensus       208 YsFQD~~~LYLiMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDF  285 (550)
T KOG0605|consen  208 YSFQDKEYLYLIMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDF  285 (550)
T ss_pred             EEecCCCeeEEEEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccc
Confidence            999999999999999995 55555544  368999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCC----------------------CCC-----CC-----------------ccccccCCCccCCccccCCCCC
Q 006772          194 GIPYLLLGR----------------------SLS-----DS-----------------DMALRLGTPNYMAPEQWEPEVR  229 (632)
Q Consensus       194 Glak~~~~~----------------------~~~-----~~-----------------~~~~~~GT~~YmAPE~~~~~~~  229 (632)
                      ||++.+...                      ...     ..                 -....+|||.|||||++.+.  
T Consensus       286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k--  363 (550)
T KOG0605|consen  286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK--  363 (550)
T ss_pred             cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC--
Confidence            998644210                      000     00                 01124899999999999865  


Q ss_pred             CCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHH
Q 006772          230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPL---MAD  304 (632)
Q Consensus       230 g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs---~~e  304 (632)
                       .|+..+|||||||||||||.|.+||.+.++.+++..|+.......+|  ..+++++.+||.+||. ||++|..   +.|
T Consensus       364 -gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E  441 (550)
T KOG0605|consen  364 -GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE  441 (550)
T ss_pred             -CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence             58899999999999999999999999999999999999776666666  4678999999999999 9999986   555


Q ss_pred             HHHHHHhhhhcccCCCCccccccccccCCCcCCCCC
Q 006772          305 ILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYT  340 (632)
Q Consensus       305 ll~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  340 (632)
                      |..      +++|.+++|+.+....  +|+.|...+
T Consensus       442 IK~------HPfF~~v~W~~l~~~~--apfvP~v~~  469 (550)
T KOG0605|consen  442 IKK------HPFFKGVDWDHLREMP--APFVPQVNS  469 (550)
T ss_pred             Hhc------CCccccCCcchhhcCC--CCCCCCCCC
Confidence            554      8899999999987654  777665443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.5e-46  Score=405.07  Aligned_cols=248  Identities=25%  Similarity=0.407  Sum_probs=216.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .+|..++.||+|||+.||.+++..+++      .||+|++.+..  .....+.+..+.++.+. .+||||+.++++|++.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge------~~A~KvVpk~~l~k~~~reKv~~EIeIHr~-L~HpnIV~f~~~FEDs   90 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGE------VVAVKVVPKKLLKKPKQREKVLNEIEIHRS-LKHPNIVQFYHFFEDS   90 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCc------EEEEEEeehHHhcCcchHHHHHHHHHHHHh-cCCCcEEeeeeEeecC
Confidence            579999999999999999999977765      89999997632  22233334444455444 4799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +++|||+|+|+ |+|.+++.  +.+.+++.+++.|+.||+.||.|||+++|||||||..|+||+++.++||+|||||..+
T Consensus        91 ~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l  168 (592)
T KOG0575|consen   91 NNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQL  168 (592)
T ss_pred             CceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeee
Confidence            99999999998 78887776  3469999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ...   .....+.||||+|+|||++..   ..+++.+||||+||+||-||.|++||...+..+++..|.  .....+|..
T Consensus       169 e~~---~Erk~TlCGTPNYIAPEVl~k---~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik--~~~Y~~P~~  240 (592)
T KOG0575|consen  169 EYD---GERKKTLCGTPNYIAPEVLNK---SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK--LNEYSMPSH  240 (592)
T ss_pred             cCc---ccccceecCCCcccChhHhcc---CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH--hcCcccccc
Confidence            432   244567899999999999984   368899999999999999999999999999999999877  567778999


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++++||.++|+.||.+|||+++|+.
T Consensus       241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  241 LSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             cCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            9999999999999999999999999996

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-46  Score=384.74  Aligned_cols=251  Identities=26%  Similarity=0.462  Sum_probs=214.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|+.++++.++.||+|..|+||++.|+.++      +.+|+|++........+..+-++.+++..+ .||+|+.+|++|.
T Consensus        75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~------~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~  147 (364)
T KOG0581|consen   75 GISLSDLERLGVLGSGNGGTVYKVRHKPTG------KIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFY  147 (364)
T ss_pred             ccCHHHhhhhhhcccCCCcEEEEEEEcCCC------eEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEE
Confidence            355669999999999999999999999877      489999996544444444344444666666 8999999999999


Q ss_pred             ECC-EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          119 ING-KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       119 ~~~-~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .++ .++|+||||+ |+|.+.+...  +++++...-+++.++++||.|||. ++||||||||+|||++..|.+||||||.
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGV  225 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGV  225 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccc
Confidence            999 5999999999 5666665443  689999999999999999999995 9999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhh
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-----SVEEIYHSVVIK  270 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-----~~~ei~~~i~~~  270 (632)
                      ++.+..     +...++.||..|||||.+.+.   .|+.++||||||++++|+++|+.||...     +.-+++..|. .
T Consensus       226 S~~lvn-----S~a~tfvGT~~YMsPERi~g~---~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv-~  296 (364)
T KOG0581|consen  226 SGILVN-----SIANTFVGTSAYMSPERISGE---SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV-D  296 (364)
T ss_pred             cHHhhh-----hhcccccccccccChhhhcCC---cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh-c
Confidence            887643     345678999999999999865   6889999999999999999999999874     5667777776 3


Q ss_pred             ccCCCCCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEKPCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~p~~p~~-lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+|..|.. +++++++||..||++||.+||++.++++
T Consensus       297 ~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  297 EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            567778886 9999999999999999999999999986

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-45  Score=391.84  Aligned_cols=272  Identities=26%  Similarity=0.447  Sum_probs=231.0

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEee
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ....|+.+++.+.+.||+|+||+||+|.++...       .||||++........ ...+.++..++.+ .+||||+.++
T Consensus        34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~-------~vavK~~~~~~~~~~~~~~f~~E~~il~~-l~HpNIV~f~  105 (362)
T KOG0192|consen   34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTD-------VVAVKIISDPDFDDESRKAFRREASLLSR-LRHPNIVQFY  105 (362)
T ss_pred             cceecChHHhhhhhhcccCCceeEEEEEeCCce-------eEEEEEecchhcChHHHHHHHHHHHHHHh-CCCCCeeeEE
Confidence            445688899999999999999999999987642       499999976432221 2223334455555 5899999999


Q ss_pred             EEEEECC-EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeeeeeCCeEEEecCC-cEEE
Q 006772          115 GISVING-KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG-LLVLNLKPSNLLLSEHD-QLVL  190 (632)
Q Consensus       115 ~~~~~~~-~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~-IvHRDLKP~NILld~~g-~vkL  190 (632)
                      |++.... .++|||||++ |+|.+++....++.+++..++.++.|||+||+|||+++ ||||||||+|||++.++ ++||
T Consensus       106 G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI  185 (362)
T KOG0192|consen  106 GACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKI  185 (362)
T ss_pred             EEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEE
Confidence            9998876 7999999998 67877776644679999999999999999999999999 99999999999999998 9999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||+++......   ...+...||+.|||||++.++ ...|+.++||||||++||||+||+.||.+....++...+...
T Consensus       186 ~DFGlsr~~~~~~---~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~  261 (362)
T KOG0192|consen  186 ADFGLSREKVISK---TSMTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG  261 (362)
T ss_pred             CCCccceeecccc---ccccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            9999998754321   233446899999999999865 457999999999999999999999999999988888888888


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                      ..+|.+|..+++.+..+|.+||..||..||++.+++..|+.+.......
T Consensus       262 ~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~  310 (362)
T KOG0192|consen  262 GLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA  310 (362)
T ss_pred             CCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence            9999999999999999999999999999999999999999887665443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-45  Score=382.59  Aligned_cols=254  Identities=22%  Similarity=0.309  Sum_probs=209.6

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh------HHHHHHHHHHHhhhccCCCceeEee
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC------AKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~------~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      -.+.|.+.+.||+|+||.|-+|..++++      +.||||++++.....      ......++.++++++ +||+|+.++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tg------k~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~  242 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTG------KQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIK  242 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccC------cEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEe
Confidence            3467899999999999999999998877      489999997643211      122234555666665 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC---CcEEE
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH---DQLVL  190 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~---g~vkL  190 (632)
                      +++...+..||||||++ |.|.+.+..+  +.+.+..-..|+.|++.||.|||++||+||||||+|||+..+   ..+||
T Consensus       243 d~f~~~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKI  320 (475)
T KOG0615|consen  243 DFFEVPDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKI  320 (475)
T ss_pred             eeeecCCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEe
Confidence            99999999999999998 6888888764  578888899999999999999999999999999999999876   68999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH-HHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-IYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e-i~~~i~~  269 (632)
                      +|||+|+....    .+-+.+.||||.|.|||++.......+..++|+||+||+||-+|+|.+||.+..... +.++|..
T Consensus       321 tDFGlAK~~g~----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~  396 (475)
T KOG0615|consen  321 TDFGLAKVSGE----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK  396 (475)
T ss_pred             cccchhhcccc----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence            99999997642    234567899999999999987644444568999999999999999999999876554 6666654


Q ss_pred             hccC--CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 KKEK--PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~~~~--p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.-.  |..-..++.+..+||.+||..||++||++.|+|+
T Consensus       397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            3222  2223578999999999999999999999999876

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-44  Score=389.16  Aligned_cols=261  Identities=27%  Similarity=0.445  Sum_probs=222.4

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...|+++.+++.++||+|.||+||+|.+..+.       .||+|.++... ...+.|. ++..++.++ +|++|++++++
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~-------~vavk~ik~~~-m~~~~f~-~Ea~iMk~L-~H~~lV~l~gV  269 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGEVWLGKWNGST-------KVAVKTIKEGS-MSPEAFL-REAQIMKKL-RHEKLVKLYGV  269 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccceEEEEEEcCCC-------cccceEEeccc-cChhHHH-HHHHHHHhC-cccCeEEEEEE
Confidence            34478888999999999999999999998754       59999997643 2334455 444556665 78999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++.+|||||||. |+|++++....+..+...+.+.++.|||.|++||+++++|||||.++||||+++..+||+|||+
T Consensus       270 ~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGL  349 (468)
T KOG0197|consen  270 CTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGL  349 (468)
T ss_pred             EecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccc
Confidence            999999999999998 9999999886678999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      |+...........  ...-.+.|.|||.+.   .+.++.+||||||||+||||+| |+.||.+.+..+....+.. +.+.
T Consensus       350 Ar~~~d~~Y~~~~--~~kfPIkWtAPEa~~---~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~-GyRl  423 (468)
T KOG0197|consen  350 ARLIGDDEYTASE--GGKFPIKWTAPEALN---YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER-GYRL  423 (468)
T ss_pred             ccccCCCceeecC--CCCCCceecCHHHHh---hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc-cCcC
Confidence            9954322111111  112267899999997   6689999999999999999999 9999999999999888764 5566


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +-|..||+++.++|..||+.+|++|||++.+...|+++.
T Consensus       424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            669999999999999999999999999999888887654

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-44  Score=372.76  Aligned_cols=248  Identities=25%  Similarity=0.405  Sum_probs=212.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .+|.+.++||+|+||.||+|+++.++      ..||||.+.+.+ .....+.+..+..+++.+ +|+||+.+++++.+++
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~------~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~   82 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSG------TEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDD   82 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCC------ceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCC
Confidence            68999999999999999999998766      489999997654 333444445555666666 4999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC------CcEEEEecC
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH------DQLVLGDFG  194 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~------g~vkL~DFG  194 (632)
                      .+|||||||. |+|.+++.+.  +.+++..++.++.||+.||++||+++||||||||+||||+..      -.+||+|||
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG  160 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG  160 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence            9999999999 6888888654  589999999999999999999999999999999999999875      358999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-  273 (632)
                      +|+.+...    ....+.||++.|||||+++   ...|+.|+|+||+|++||+|++|+.||...+..+++..+...... 
T Consensus       161 fAR~L~~~----~~a~tlcGSplYMAPEV~~---~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~  233 (429)
T KOG0595|consen  161 FARFLQPG----SMAETLCGSPLYMAPEVIM---SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV  233 (429)
T ss_pred             hhhhCCch----hHHHHhhCCccccCHHHHH---hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc
Confidence            99987533    2345679999999999997   457999999999999999999999999999999988877654433 


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                      +.++..+++.+.+|+...+.++|.+|-++.+..
T Consensus       234 ~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~  266 (429)
T KOG0595|consen  234 PVLPAELSNPLRELLISLLQRNPKDRISFEDFF  266 (429)
T ss_pred             CchhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence            445577888999999999999999999877654

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-43  Score=370.03  Aligned_cols=293  Identities=21%  Similarity=0.299  Sum_probs=234.6

Q ss_pred             cccccCCC-CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHH--HHHHHHHhhh
Q 006772           27 RTVVATPT-QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKFEELFPK  103 (632)
Q Consensus        27 ~~~~~~~~-~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~--~~~~~~il~~  103 (632)
                      ++.++... .....+..++|+++++||+|.-|+||||+.+.++      ..+|+|++.+......+..  ...+++|++ 
T Consensus        60 w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~------~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~-  132 (459)
T KOG0610|consen   60 WEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTN------CLFAMKVMDKESLASRKKLKRAQTEREILS-  132 (459)
T ss_pred             hhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCC------ceEEEEEecHHHHhhhhHHHHHHHHHHHHH-
Confidence            33444333 3446678899999999999999999999998766      4899999977543322222  223344544 


Q ss_pred             ccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          104 FRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       104 l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      +.+||.++.|+..++.++..|++||||. |+|..++.++.++.|++..+++|+++++.||+|||-.|||+|||||+||||
T Consensus       133 ~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv  212 (459)
T KOG0610|consen  133 LLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV  212 (459)
T ss_pred             hcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE
Confidence            4589999999999999999999999998 577777777788999999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccC-----------------------------C---CCC---------------------CCcc
Q 006772          183 SEHDQLVLGDFGIPYLLLG-----------------------------R---SLS---------------------DSDM  209 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~-----------------------------~---~~~---------------------~~~~  209 (632)
                      -++|++-|+||-|+.....                             +   ...                     ....
T Consensus       213 redGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RS  292 (459)
T KOG0610|consen  213 REDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARS  292 (459)
T ss_pred             ecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccc
Confidence            9999999999998753310                             0   000                     0011


Q ss_pred             ccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006772          210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVII  289 (632)
Q Consensus       210 ~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~  289 (632)
                      .+++||-.|+|||++.++   ..+.++|||+|||+|||||.|..||.|.+.++.+..|+.+....+-.+..+.++++||+
T Consensus       293 nSFVGThEYlAPEvI~G~---GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr  369 (459)
T KOG0610|consen  293 NSFVGTHEYLAPEVIRGE---GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIR  369 (459)
T ss_pred             cccccccccccceeeecC---CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHH
Confidence            235899999999999976   57789999999999999999999999999999999988544333323467899999999


Q ss_pred             HhhhcCcCCCCC----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          290 GCFEYDLRNRPL----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       290 ~cL~~DP~~RPs----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ++|.+||.+|..    ++||.+      ++||.+.+|.-+  +...||..|.
T Consensus       370 ~LLvKdP~kRlg~~rGA~eIK~------HpFF~gVnWaLi--r~~~PP~iP~  413 (459)
T KOG0610|consen  370 KLLVKDPSKRLGSKRGAAEIKR------HPFFEGVNWALI--RCARPPEIPK  413 (459)
T ss_pred             HHhccChhhhhccccchHHhhc------CccccCCChhhe--eccCCCcCCC
Confidence            999999999997    677665      889999999943  3455665553

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-43  Score=369.88  Aligned_cols=255  Identities=29%  Similarity=0.493  Sum_probs=209.1

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ..++...+.||+|+||.||++.+++++      ...|||......... .+.+.++..++.++. ||||++++|......
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g------~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~   87 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTG------ELMAVKSVELEDSPT-SESLEREIRILSRLN-HPNIVQYYGSSSSRE   87 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCC------cceeeeeeecccchh-HHHHHHHHHHHHhCC-CCCEEeeCCcccccc
Confidence            457899999999999999999998764      479999986543222 233455556777776 999999999744443


Q ss_pred             --EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEecCCce
Q 006772          122 --KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGDFGIPY  197 (632)
Q Consensus       122 --~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~DFGlak  197 (632)
                        .++|.|||+. |+|.+++....+ .|+++.+++|++||++||+|||++|||||||||+|||++. ++.+||+|||+++
T Consensus        88 ~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   88 NDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             CeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence              7999999998 688888877654 8999999999999999999999999999999999999999 7999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~-~~~~ei~~~i~~~~~~p~~  276 (632)
                      ................||+.|||||++..  ......++|||||||++.||+||+.||.. ....+....+......|.+
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~--g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~i  244 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMAPEVIRN--GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEI  244 (313)
T ss_pred             ccccccccccccccccCCccccCchhhcC--CCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCC
Confidence            76542222233345789999999999973  11223599999999999999999999987 4444444455555567889


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |..+|+++++++.+|+++||++|||+.++|+
T Consensus       245 p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~  275 (313)
T KOG0198|consen  245 PDSLSDEAKDFLRKCFKRDPEKRPTAEELLE  275 (313)
T ss_pred             CcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            9999999999999999999999999999997

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-44  Score=372.92  Aligned_cols=286  Identities=22%  Similarity=0.347  Sum_probs=236.2

Q ss_pred             CCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCce
Q 006772           34 TQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSV  110 (632)
Q Consensus        34 ~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I  110 (632)
                      ...+..|...+|.++..||.|+||+|.+|..+.+.+      .+|||++++.-   .+..+ -.-.+..++......|.+
T Consensus       340 ~~~~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdE------LyAiKiLkKDViiQdDDve-ctm~EKrvLAL~~kppFL  412 (683)
T KOG0696|consen  340 SSKRDRIKATDFNFLMVLGKGSFGKVLLAERKGTDE------LYAIKILKKDVIIQDDDVE-CTMVEKRVLALPGKPPFL  412 (683)
T ss_pred             CCcccceeecccceEEEeccCccceeeeecccCcch------hhhhhhhccceeeecCccc-ceehhhhheecCCCCchH
Confidence            344456788999999999999999999999877664      79999998742   11111 111223455556678999


Q ss_pred             eEeeEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEE
Q 006772          111 CWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       111 ~~l~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vk  189 (632)
                      +.++.+|++-+++|+||||+.| +|--.+.+  -++|.++.+..|+.+|+.||-|||++|||+||||..|||||.+|++|
T Consensus       413 ~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiK  490 (683)
T KOG0696|consen  413 VQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK  490 (683)
T ss_pred             HHHHHHhhhhhheeeEEEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceE
Confidence            9999999999999999999996 44433332  36899999999999999999999999999999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 006772          190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~  269 (632)
                      |+|||+++.-..   ...++.++||||.|+|||++.   +.+|+..+||||||++||||+.|++||.|.+.+++++.|..
T Consensus       491 i~DFGmcKEni~---~~~TTkTFCGTPdYiAPEIi~---YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e  564 (683)
T KOG0696|consen  491 IADFGMCKENIF---DGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME  564 (683)
T ss_pred             eeeccccccccc---CCcceeeecCCCcccccceEE---ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            999999985322   334556789999999999997   66899999999999999999999999999999999999874


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHH-HHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD-ILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~e-ll~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                        ..-.+|..+|.++.++....|.+.|.+|....- --+.++  .++||..++|+.++.+++++|+.|..
T Consensus       565 --hnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~--~H~FFR~iDWek~E~~eiqPPfkPk~  630 (683)
T KOG0696|consen  565 --HNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIR--EHPFFRRIDWEKLERREIQPPFKPKI  630 (683)
T ss_pred             --ccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchh--hCcchhhccHHHHhhccCCCCCCCcc
Confidence              445679999999999999999999999985421 001111  27899999999999999999998864

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.7e-45  Score=365.94  Aligned_cols=258  Identities=21%  Similarity=0.392  Sum_probs=209.6

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeE-E
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHG-I  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~-~  116 (632)
                      .-+..+|++.++||+|+||+||++.+..++      ..||.|.++-... ....+..-.+..++++ .+||||+.+++ .
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g------~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQ-L~HpNIVqYy~~~   87 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLLDG------KLVALKKIQFGMMDAKARQDCVKEISLLKQ-LNHPNIVQYYAHS   87 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeeccCc------chhhhhhcchhhccHHHHHHHHHHHHHHHh-cCCchHHHHHHHh
Confidence            345678999999999999999999998766      4899998863221 1222223333344554 47999999887 4


Q ss_pred             EEECCE-EEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceeeeeeCCeEEEecCCcE
Q 006772          117 SVINGK-ICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHS--IG--LLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       117 ~~~~~~-l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs--~~--IvHRDLKP~NILld~~g~v  188 (632)
                      +..+.. ++||||||. |+|...+.+.+  ++.+++..+|+|+.|++.||.++|+  ..  |+||||||.||+|+.+|.+
T Consensus        88 f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvv  167 (375)
T KOG0591|consen   88 FIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVV  167 (375)
T ss_pred             hhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCce
Confidence            555555 899999998 78888776543  4689999999999999999999999  55  9999999999999999999


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV  268 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~  268 (632)
                      ||+|||+++.+...   ..-..+.+|||.||+||.+.+.   +|+++|||||+||++|||+.-++||.|.+..++...|.
T Consensus       168 KLGDfGL~r~l~s~---~tfA~S~VGTPyYMSPE~i~~~---~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~  241 (375)
T KOG0591|consen  168 KLGDFGLGRFLSSK---TTFAHSLVGTPYYMSPERIHES---GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIE  241 (375)
T ss_pred             eeccchhHhHhcch---hHHHHhhcCCCcccCHHHHhcC---CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHH
Confidence            99999999987442   2233567899999999999854   79999999999999999999999999999888888887


Q ss_pred             hhccCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          269 IKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       269 ~~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      .+ +-|+.| ...|.++..||..|+..||+.||+...++..+.
T Consensus       242 qg-d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  242 QG-DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             cC-CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            54 455566 778999999999999999999998555554443

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=4.1e-42  Score=362.93  Aligned_cols=272  Identities=23%  Similarity=0.360  Sum_probs=221.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      +.||||++.+...  .........+..++....+|++|+.+++++...+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~   74 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTD------ELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD   74 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC
Confidence            5899999999999999999987655      4899999875321  1111112223344556678999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+||||++ |+|.+.+...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        75 ~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          75 RLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             EEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            9999999998 5777776543  579999999999999999999999999999999999999999999999999987532


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ..   .......+||+.|||||++..   ..++.++|+|||||++|||++|+.||.+.+..++...+..  ....+|..+
T Consensus       153 ~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~--~~~~~p~~~  224 (323)
T cd05616         153 WD---GVTTKTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--HNVAYPKSM  224 (323)
T ss_pred             CC---CCccccCCCChhhcCHHHhcC---CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCcC
Confidence            21   122234579999999999974   4688999999999999999999999999888888777663  445578889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          281 PPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      +.++.+++.+||++||.+|++.     .+++      .+.++...+|..+..+...++..+.
T Consensus       225 s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~------~h~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05616         225 SKEAVAICKGLMTKHPGKRLGCGPEGERDIK------EHAFFRYIDWEKLERKEVQPPYKPK  280 (323)
T ss_pred             CHHHHHHHHHHcccCHHhcCCCCCCCHHHHh------cCCCcCCCCHHHHHhCCCCCCcCCc
Confidence            9999999999999999999975     4433      3678888999998888877776554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-42  Score=371.98  Aligned_cols=253  Identities=26%  Similarity=0.407  Sum_probs=218.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC----chhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL----KEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~----~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .....|++++.||+|+||+|++|.+..++      +.||+|++.+.    ........+.++..++..+.+||||+.++.
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~------~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~e   87 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTG------EKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLE   87 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCC------CeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEE
Confidence            44578999999999999999999998776      48999987653    111234444555567788888999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC-CcEEEEec
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-DQLVLGDF  193 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~-g~vkL~DF  193 (632)
                      ++.....+|+||||+. |+|++++..  .+++.+.++.+++.||+.|++|||++||+||||||+|||++.+ +++||+||
T Consensus        88 v~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DF  165 (370)
T KOG0583|consen   88 VFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDF  165 (370)
T ss_pred             EEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecc
Confidence            9999999999999999 599999976  4689999999999999999999999999999999999999999 99999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCC-CcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPI-SFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~-t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      |++....   .......+.|||+.|+|||++.+..  .| ..++|+||+|++||.|++|..||...+...++..|.  ..
T Consensus       166 G~s~~~~---~~~~~l~t~cGsp~Y~aPEvl~~~~--~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~--~~  238 (370)
T KOG0583|consen  166 GLSAISP---GEDGLLKTFCGSPAYAAPEVLSGKG--TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIR--KG  238 (370)
T ss_pred             ccccccC---CCCCcccCCCCCcccCCHHHhCCCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHh--cC
Confidence            9998653   1234456789999999999998652  14 488999999999999999999999988888877754  66


Q ss_pred             CCCCCCCC-CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPSGL-PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~~l-p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+|..+ ++++.+|+.+||..||.+|+++.+|+.
T Consensus       239 ~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  239 EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            77789999 999999999999999999999999985

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-42  Score=360.03  Aligned_cols=274  Identities=21%  Similarity=0.323  Sum_probs=225.2

Q ss_pred             cCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCce
Q 006772           31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV  110 (632)
Q Consensus        31 ~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I  110 (632)
                      +..++....++.++|++...||.|.-+.||+|++...++      .||||++.-.+....-..++++...+ .+-+||||
T Consensus        14 ~~~~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e------~VAIK~inLEkc~~~ld~l~kE~~~m-sl~~HPNI   86 (516)
T KOG0582|consen   14 ASSSEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNE------VVAIKIINLEKCNNDLDALRKEVQTM-SLIDHPNI   86 (516)
T ss_pred             cccccccCCCCccceeEEEEEeccceeEeeeeeecccCC------EEEEEEeehhhhhhhHHHHHHHHHHh-hhcCCCCc
Confidence            344455566788999999999999999999999998775      89999997655544444455554444 44589999


Q ss_pred             eEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEE
Q 006772          111 CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       111 ~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vk  189 (632)
                      +.++..|+.++.+|+||.||. ||+++.+.......|++..+..+++++++||.|||.+|.||||||+.||||+.+|.+|
T Consensus        87 v~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~Vk  166 (516)
T KOG0582|consen   87 VTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVK  166 (516)
T ss_pred             ceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEE
Confidence            999999999999999999998 8999999887667799999999999999999999999999999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCcc-ccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 006772          190 LGDFGIPYLLLGRSLSDSDM-ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV  268 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~-~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~  268 (632)
                      |+|||.+..+.......... .++.||+.|||||+++.+. ..|+.|+||||||++.+||++|..||....+.+++..-+
T Consensus       167 LadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~-~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL  245 (516)
T KOG0582|consen  167 LADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL-HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL  245 (516)
T ss_pred             EcCceeeeeecccCceeeEeeccccCcccccChHHhhhcc-cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence            99999987765543222222 5568999999999976554 469999999999999999999999999999888765544


Q ss_pred             hhccCCC-----CC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH--HHHhhh
Q 006772          269 IKKEKPC-----IP----SGLPPAVENVIIGCFEYDLRNRPLMADILH--AFESSQ  313 (632)
Q Consensus       269 ~~~~~p~-----~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~--~Le~~~  313 (632)
                      . +..|.     ++    ...+..++.+|..||++||.+|||++++++  .|...+
T Consensus       246 q-n~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  246 Q-NDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             c-CCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence            2 33331     11    235668999999999999999999999996  344443

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.8e-42  Score=364.62  Aligned_cols=270  Identities=21%  Similarity=0.351  Sum_probs=210.0

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|+.++|++.+.||+|+||.||+|.+..... ....+.||||++..............+..++..+.+|+||+.+++++.
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDK-KSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCC-cccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            4667899999999999999999998643221 123357999999754332222223334456677778999999999876


Q ss_pred             E-CCEEEEEEecCC-CCHHHHHHHhc------------------------------------------------------
Q 006772          119 I-NGKICIAMKFYE-GSVGDRIAQQR------------------------------------------------------  142 (632)
Q Consensus       119 ~-~~~l~LVmEy~~-GsL~d~l~~~~------------------------------------------------------  142 (632)
                      . ++.++++|||++ |+|.+++....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            5 456899999998 68887776421                                                      


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCC
Q 006772          143 ------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP  216 (632)
Q Consensus       143 ------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~  216 (632)
                            ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ........+++
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~  240 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLPL  240 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCCc
Confidence                  13478889999999999999999999999999999999999999999999999976432111 11112234678


Q ss_pred             ccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 006772          217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD  295 (632)
Q Consensus       217 ~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~D  295 (632)
                      .|||||++.+   ..++.++|||||||+||||++ |..||.+....+...........+..|..+++++.+++.+||+.|
T Consensus       241 ~y~aPE~~~~---~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  317 (338)
T cd05102         241 KWMAPESIFD---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGD  317 (338)
T ss_pred             cccCcHHhhc---CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            8999999864   368899999999999999997 999998866444333444444555667889999999999999999


Q ss_pred             cCCCCCHHHHHHHHHhhh
Q 006772          296 LRNRPLMADILHAFESSQ  313 (632)
Q Consensus       296 P~~RPs~~ell~~Le~~~  313 (632)
                      |.+||++.++++.|+.+.
T Consensus       318 p~~RPs~~el~~~l~~~~  335 (338)
T cd05102         318 PKERPTFSALVEILGDLL  335 (338)
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.3e-41  Score=359.27  Aligned_cols=270  Identities=24%  Similarity=0.375  Sum_probs=218.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +|++.+.||+|+||.||+|.+..++      +.||||++.+..   ......+ ..+..++..+.+|++|+.+++++...
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~-~~e~~~l~~~~~~~~i~~~~~~~~~~   73 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTD------ELYAIKILKKDVIIQDDDVECT-MVEKRVLALPGKPPFLTQLHSCFQTM   73 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHH-HHHHHHHHhcCCCCceeeeEEEEEcC
Confidence            5899999999999999999987655      489999987532   1122222 23334556666778899999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||++ |+|.+++..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          74 DRLYFVMEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             CEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            99999999998 577766644  357899999999999999999999999999999999999999999999999998653


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ...   .......+||+.|+|||++.+   ..++.++|+|||||++|||++|+.||.+.+..+.+..+.  ...+.+|..
T Consensus       152 ~~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~--~~~~~~~~~  223 (324)
T cd05587         152 IFG---GKTTRTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKS  223 (324)
T ss_pred             CCC---CCceeeecCCccccChhhhcC---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCC
Confidence            211   122334579999999999974   367889999999999999999999999988888777765  345667888


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      +++++.+++.+||+.||.+|++.     .++++      ++++...+|..+..+...+++.+
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~------hp~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd05587         224 LSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE------HAFFRRIDWEKLERREIQPPFKP  279 (324)
T ss_pred             CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCccC
Confidence            99999999999999999999976     34333      67888889988776665555443

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1e-41  Score=360.10  Aligned_cols=264  Identities=21%  Similarity=0.375  Sum_probs=215.0

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+..++      +.||||++.+...   .....+. .+..++..+ +|+||+.+++.+..++.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~-~e~~~l~~l-~hp~i~~~~~~~~~~~~~~l   72 (323)
T cd05571           1 KLLGKGTFGKVILVREKATG------KYYAMKILKKEVIIAKDEVAHTL-TESRVLQNT-RHPFLTALKYSFQTHDRLCF   72 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhHHHHHHH-HHHHHHHhC-CCCCCCCEEEEEEcCCEEEE
Confidence            46999999999999987655      4899999975321   1112222 233344444 78999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        73 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--  148 (323)
T cd05571          73 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--  148 (323)
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--
Confidence            999998 567666654  357899999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+...+...+.  .....+|..+++++
T Consensus       149 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~  222 (323)
T cd05571         149 -GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLSPEA  222 (323)
T ss_pred             -CCcccceecCccccChhhhcCC---CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHH
Confidence             1223346799999999998743   67899999999999999999999999988777776655  34556788999999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++|.+||+.||++||     ++.++++      ++++...+|..+..+...+++.+
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~------h~~f~~~~~~~~~~~~~~~~~~~  273 (323)
T cd05571         223 KSLLAGLLKKDPKQRLGGGPEDAKEIME------HRFFASINWQDVVQKKLEPPFKP  273 (323)
T ss_pred             HHHHHHHccCCHHHcCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999999     7888775      77888899998877777666544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-43  Score=355.34  Aligned_cols=282  Identities=20%  Similarity=0.340  Sum_probs=233.8

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ..+..++|.+++.||+|.||+|-+++-+.++      +.+|||++++.-   .+....-+.+ .+.++. ..||++..+.
T Consensus       163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~------k~YAiKIlkKeviiakdEVAHTlTE-~RVL~~-~~HPFLt~LK  234 (516)
T KOG0690|consen  163 NKVTMEDFDFLKVLGKGTFGKVILCREKATG------KLYAIKILKKEVIIAKDEVAHTLTE-NRVLQN-CRHPFLTSLK  234 (516)
T ss_pred             ceeccchhhHHHHhcCCccceEEEEeecccC------ceeehhhhhhhheeehHHhhhhhhH-HHHHHh-ccCcHHHHhh
Confidence            4467799999999999999999999988776      589999998742   2222222222 233333 4789999999


Q ss_pred             EEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      ..|+.++++|+||||..| .|.-.+.+  .+.|++..+++|..+|+.||.|||+++||+||||.+|+|||.+|++||+||
T Consensus       235 YsFQt~drlCFVMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDF  312 (516)
T KOG0690|consen  235 YSFQTQDRLCFVMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDF  312 (516)
T ss_pred             hhhccCceEEEEEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeec
Confidence            999999999999999996 44433333  357999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++.-..   ....+.++||||.|+|||++...   .|..++|||.+|+++|||++|+.||+..+.+.++..|.  ...
T Consensus       313 GLCKE~I~---~g~t~kTFCGTPEYLAPEVleDn---DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl--~ed  384 (516)
T KOG0690|consen  313 GLCKEEIK---YGDTTKTFCGTPEYLAPEVLEDN---DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL--MED  384 (516)
T ss_pred             ccchhccc---ccceeccccCChhhcCchhhccc---cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH--hhh
Confidence            99985432   12345678999999999999855   67889999999999999999999999999998888877  456


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC--HHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCCC
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPL--MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYT  340 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs--~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  340 (632)
                      ..+|..++++++.|+..+|.+||.+|..  ..+..   +-+.+.||.+++|+....+.+.||+.|...+
T Consensus       385 ~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDak---Ei~~h~FF~~v~W~~~~~Kki~PPfKPqVtS  450 (516)
T KOG0690|consen  385 LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAK---EIMRHRFFASVDWEATYRKKIEPPFKPQVTS  450 (516)
T ss_pred             ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHH---HHHhhhhhccCCHHHHHHhccCCCCCCCccc
Confidence            6789999999999999999999999983  33322   2334789999999999999999999887544

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.8e-41  Score=357.90  Aligned_cols=267  Identities=21%  Similarity=0.356  Sum_probs=219.0

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++.+.||+|+||.||+|.++.++      +.||+|++.+....  .....+..+..++..+ +|+||+.+++.+.
T Consensus        16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~   88 (329)
T PTZ00263         16 KLSDFEMGETLGTGSFGRVRIAKHKGTG------EYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQ   88 (329)
T ss_pred             CchheEEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence            5689999999999999999999987665      48999998653211  1111222333445554 7999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++.+|+||||+. |+|.+.+..  .+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        89 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  166 (329)
T PTZ00263         89 DENRVYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAK  166 (329)
T ss_pred             cCCEEEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCce
Confidence            9999999999998 577777754  3578999999999999999999999999999999999999999999999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....      .....+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+.+..+..  ....+|
T Consensus       167 ~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~--~~~~~p  235 (329)
T PTZ00263        167 KVPD------RTFTLCGTPEYLAPEVIQSK---GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA--GRLKFP  235 (329)
T ss_pred             EcCC------CcceecCChhhcCHHHHcCC---CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CCcCCC
Confidence            6532      12345799999999999744   578899999999999999999999999888877777653  455678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCC
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDT  333 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~  333 (632)
                      ..++..+.+||.+||+.||.+||+     +.+++.      ++++.+.+|..+..+...++
T Consensus       236 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~------hp~f~~~~~~~~~~~~~~~~  290 (329)
T PTZ00263        236 NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN------HPYFHGANWDKLYARYYPAP  290 (329)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc------CCccCCCCHHHHHhCCCCCC
Confidence            889999999999999999999996     566665      77888888988766555444

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=2.2e-41  Score=357.14  Aligned_cols=265  Identities=20%  Similarity=0.308  Sum_probs=214.9

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|++..++      +.||||++.+..   ......+ ..+..++..+.+|++|+.+++++..++.+|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~-~~e~~il~~~~~hp~i~~~~~~~~~~~~~~l   73 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTD------EVYAIKVLKKDVILQDDDVDCT-MTEKRILALAAKHPFLTALHCCFQTKDRLFF   73 (321)
T ss_pred             CccccCCCeEEEEEEECCCC------CEEEEEEEeHHHhhhhhHHHHH-HHHHHHHHhccCCCCccceeeEEEcCCeEEE
Confidence            46999999999999987655      489999987532   1111222 2333455556689999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+.+..  .+.+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--  149 (321)
T cd05591          74 VMEYVNGGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--  149 (321)
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC--
Confidence            999998 567666654  357899999999999999999999999999999999999999999999999998754221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|+|||++.+   ..++.++|+|||||++|||++|+.||.+.+..+.+..+..  ....+|..++.++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~  223 (321)
T cd05591         150 -GVTTTTFCGTPDYIAPEILQE---LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH--DDVLYPVWLSKEA  223 (321)
T ss_pred             -CccccccccCccccCHHHHcC---CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHH
Confidence             122234579999999999874   3678899999999999999999999999988887777653  4455678899999


Q ss_pred             HHHHHHhhhcCcCCCC-------CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRP-------LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RP-------s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .+++.+||+.||++||       ++.++++      ++++...+|..+..+...+++.+
T Consensus       224 ~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~------hp~~~~~~~~~~~~~~~~~~~~~  276 (321)
T cd05591         224 VSILKAFMTKNPNKRLGCVASQGGEDAIKQ------HPFFKEIDWVLLEQRKIKPPFKP  276 (321)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCCHHHHhc------CCccCCCCHHHHHhCCCCCCCCC
Confidence            9999999999999999       6666664      67888899998877666665543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=5.1e-41  Score=355.37  Aligned_cols=276  Identities=22%  Similarity=0.354  Sum_probs=216.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +|++.+.||+|+||.||+|++....   ..++.||+|++.+...   .........+..++..+.+|++|+.+++++..+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGH---DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE   77 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccC---CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC
Confidence            5899999999999999999875322   2346899999865321   111222344456677777899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||+. |+|.+++..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        78 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          78 AKLHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             CEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            99999999998 577777754  357999999999999999999999999999999999999999999999999998764


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC----CHHHHHHHHHhhccCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK----SVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~----~~~ei~~~i~~~~~~p~  275 (632)
                      ....  .......+||+.|||||++.+.  ..++.++|||||||++|||++|..||...    ....+...+.  ...+.
T Consensus       156 ~~~~--~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~  229 (332)
T cd05614         156 LSEE--KERTYSFCGTIEYMAPEIIRGK--GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KCDPP  229 (332)
T ss_pred             cccC--CCccccccCCccccCHHHhcCC--CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cCCCC
Confidence            3221  1122345799999999998743  24678999999999999999999999753    2233333333  34566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      +|..+++.+.+++.+||+.||++||     ++.++++      ++++.+.+|..+......+++.+
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~~  289 (332)
T cd05614         230 FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE------HPFFKGLDWEALALRKVNPPFRP  289 (332)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            7888999999999999999999999     6667665      67888888887766555555433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.1e-41  Score=349.57  Aligned_cols=273  Identities=19%  Similarity=0.329  Sum_probs=216.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .|++.+.||+|+||+||+|.+..++      +.||+|.+.+....  ........+..++..+ +|++++.+.+.+..++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~   73 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKD   73 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCC------ceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCC
Confidence            4889999999999999999987765      48999998653221  1112222333445544 7899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..++||||++ |+|.+.+.......+++..++.++.|++.||+|||+++|+||||||+|||+++++.++|+|||++....
T Consensus        74 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631          74 ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            9999999998 566666655444578999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hhccCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--IKKEKPCIPS  278 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~--~~~~~p~~p~  278 (632)
                      ..    .......||..|||||++.+   ..++.++|||||||++|||++|+.||.+.+.......+.  .......++.
T Consensus       154 ~~----~~~~~~~g~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd05631         154 EG----ETVRGRVGTVGYMAPEVINN---EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSE  226 (285)
T ss_pred             CC----CeecCCCCCCCccCHhhhcC---CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCc
Confidence            21    11234578999999999974   368899999999999999999999998765322211111  1233345677


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .+++++.+|+++||+.||.+||+     ++++++      ++++.+.+|..+..+.+.+++.|
T Consensus       227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~------h~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05631         227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ------HPIFKNINFKRLEANMLEPPFCP  283 (285)
T ss_pred             cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc------CHhhcCCCHHHHHhCcCCcCCCC
Confidence            89999999999999999999997     677765      77888999999998888888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=4.9e-41  Score=358.57  Aligned_cols=276  Identities=20%  Similarity=0.270  Sum_probs=225.1

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~  112 (632)
                      ....++.++|++.+.||+|+||.||+|.++..+.     ..||+|++.+..   ......+ ..+..++..+ +||||+.
T Consensus        23 ~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~-~~E~~~l~~l-~hp~Iv~   95 (340)
T PTZ00426         23 RKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDF-----PPVAIKRFEKSKIIKQKQVDHV-FSERKILNYI-NHPFCVN   95 (340)
T ss_pred             cCCCCChhhcEEEEEEeecCCeEEEEEEEECCCC-----eEEEEEEEEHHHhhhhhhHHHH-HHHHHHHHhC-CCCCCcc
Confidence            3455677899999999999999999998765432     479999986422   1112222 2333444444 7999999


Q ss_pred             eeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          113 LHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +++++..++.+|+||||+. |+|.+++..  .+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus        96 ~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~  173 (340)
T PTZ00426         96 LYGSFKDESYLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMT  173 (340)
T ss_pred             eEEEEEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEe
Confidence            9999999999999999997 577777754  3579999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++....      .....+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+...++..+..  
T Consensus       174 DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~--  242 (340)
T PTZ00426        174 DFGFAKVVDT------RTYTLCGTPEYIAPEILLNV---GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILE--  242 (340)
T ss_pred             cCCCCeecCC------CcceecCChhhcCHHHHhCC---CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhc--
Confidence            9999976532      22345799999999998743   578899999999999999999999999888777777653  


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ....+|..+++++.++|++||+.||++|+     +++++++      ++++.+.+|..+..+.+..+..|.
T Consensus       243 ~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~------hp~f~~~~~~~~~~~~~~~~~~p~  307 (340)
T PTZ00426        243 GIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE------HPWFGNIDWVSLLHKNVEVPYKPK  307 (340)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence            34456888999999999999999999996     7887765      788889999887777776665554

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=5.5e-41  Score=354.48  Aligned_cols=268  Identities=23%  Similarity=0.358  Sum_probs=213.0

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhh--hccCCCceeEeeEEEEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFP--KFRESQSVCWLHGISVI  119 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~--~l~~h~~I~~l~~~~~~  119 (632)
                      |++.+.||+|+||.||+|.+..++      +.||||++++..   ....+.+.+ +..++.  ....|+||+.+++++..
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~l~~-e~~~~~~~~~l~hp~i~~~~~~~~~   73 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTG------ELYAIKALKKGDIIARDEVESLMC-EKRIFETANSERHPFLVNLFACFQT   73 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHH-HHHHHHhccccCCCChhceeeEEEc
Confidence            688999999999999999987665      489999997532   111122222 222222  23469999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+|+||||+.| +|...+.   .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        74 ~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05589          74 EDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKE  150 (324)
T ss_pred             CCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence            9999999999995 5544442   35799999999999999999999999999999999999999999999999999865


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      ....   .......+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+....+..  ..+.+|.
T Consensus       151 ~~~~---~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~--~~~~~p~  222 (324)
T cd05589         151 GMGF---GDRTSTFCGTPEFLAPEVLTET---SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN--DEVRYPR  222 (324)
T ss_pred             CCCC---CCcccccccCccccCHhHhcCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCC
Confidence            3221   1223346799999999998743   678899999999999999999999999888777766653  4455788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .+++++.++|.+||+.||.+||+     +.++++      +.++.+.+|.....+...++..+
T Consensus       223 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~------~~~f~~~~~~~~~~~~~~~~~~~  279 (324)
T cd05589         223 FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK------QPFFRDINWDDLLARKIKPPFVP  279 (324)
T ss_pred             CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh------CCCcCCCCHHHHHhCCCCcCccC
Confidence            89999999999999999999994     555543      67788888887766666555443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=4.8e-41  Score=354.24  Aligned_cols=265  Identities=23%  Similarity=0.390  Sum_probs=214.3

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+..++      +.||||++++...   ....... .+..++....+|+||+.+++++..++.+|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-~e~~~l~~~~~hp~i~~~~~~~~~~~~~~l   73 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTN------EFFAIKALKKDVVLEDDDVECTM-VERRVLALAWEHPFLTHLFCTFQTKEHLFF   73 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhhHHHHH-HHHHHHHhccCCCCccceeeEEEcCCEEEE
Confidence            47999999999999987655      4899999975321   1112222 223344555689999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+++..  .+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... 
T Consensus        74 v~e~~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-  150 (316)
T cd05592          74 VMEYLNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-  150 (316)
T ss_pred             EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-
Confidence            999998 566666644  3579999999999999999999999999999999999999999999999999997643221 


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                        ......+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+.  ...+.+|..++.++
T Consensus       151 --~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~  223 (316)
T cd05592         151 --GKASTFCGTPDYIAPEILKGQ---KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL--NDRPHFPRWISKEA  223 (316)
T ss_pred             --CccccccCCccccCHHHHcCC---CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHH
Confidence              222345799999999998743   57899999999999999999999999988887777654  45667788899999


Q ss_pred             HHHHHHhhhcCcCCCCCHH-HHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRPLMA-DILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~-ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .+++.+||+.||.+||++. ++++      +.++...+|..+..+...+++.+
T Consensus       224 ~~ll~~~l~~~P~~R~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05592         224 KDCLSKLFERDPTKRLGVDGDIRQ------HPFFRGIDWERLEKREIPPPFKP  270 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHHc------CcccCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999999875 4443      66788888988777766665544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=7.4e-41  Score=353.85  Aligned_cols=276  Identities=22%  Similarity=0.343  Sum_probs=221.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.++.++      +.||||++.+...  .........+..++..+.+|++|+.+++++..++
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~   74 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTD------ELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD   74 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC
Confidence            5889999999999999999987665      4899999875321  1111222233445566678899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+||||++ |+|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        75 ~~~lv~Ey~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          75 RLYFVMEYVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM  152 (323)
T ss_pred             EEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence            9999999998 577766644  3579999999999999999999999999999999999999999999999999987532


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ..   .......+||+.|||||++.+   ..++.++|+|||||++|||++|..||.+.+..++...+..  ....+|..+
T Consensus       153 ~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~--~~~~~p~~~  224 (323)
T cd05615         153 VD---GVTTRTFCGTPDYIAPEIIAY---QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME--HNVSYPKSL  224 (323)
T ss_pred             CC---CccccCccCCccccCHHHHcC---CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCccC
Confidence            21   112234578999999999874   3688999999999999999999999999888877777653  445678889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHH-HHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMAD-ILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~e-ll~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      +.++.+++.+||++||.+|++..+ ..+.+  ..+.++...+|..+..+...+++.+.
T Consensus       225 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~i--~~h~~f~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05615         225 SKEAVSICKGLMTKHPSKRLGCGPEGERDI--REHAFFRRIDWDKLENREIQPPFKPK  280 (323)
T ss_pred             CHHHHHHHHHHcccCHhhCCCCCCCCHHHH--hcCcccCCCCHHHHhcCCCCcCccCc
Confidence            999999999999999999997532 12222  23678889999988888777776554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=5.8e-41  Score=354.15  Aligned_cols=270  Identities=23%  Similarity=0.390  Sum_probs=214.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||+||+|.+..++      +.||||++.+...   .....+..+...+ .+..+|+||+.+++.+..++..|+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~~~~-~~~l~hp~iv~~~~~~~~~~~~~l   73 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADG------KFYAVKVLQKKAILKKKEQKHIMAERNVL-LKNVKHPFLVGLHYSFQTADKLYF   73 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhHHHHHHHHHHHH-HhhCCCCCCCCeeEEEEeCCEEEE
Confidence            46999999999999987655      4899999865321   1122233333223 334579999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--  149 (323)
T cd05575          74 VLDYVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--  149 (323)
T ss_pred             EEcCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC--
Confidence            999998 467666654  357999999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|||||++.+   ..++.++|+|||||++|||++|..||.+.+..+++..+..  ....++..+++++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~  223 (323)
T cd05575         150 -SKTTSTFCGTPEYLAPEVLRK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN--KPLRLKPNISVSA  223 (323)
T ss_pred             -CCccccccCChhhcChhhhcC---CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHH
Confidence             122334579999999999874   3688999999999999999999999999888887777653  3445667889999


Q ss_pred             HHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          285 ENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .++|.+||+.||.+||++.+.+..+  +.++++...+|..+..+.+.+++.+.
T Consensus       224 ~~li~~~l~~~p~~R~~~~~~~~~i--l~~~~~~~~~~~~~~~~~~~~~~~~~  274 (323)
T cd05575         224 RHLLEGLLQKDRTKRLGAKDDFLEI--KNHVFFSSINWDDLVNKKITPPFNPN  274 (323)
T ss_pred             HHHHHHHhhcCHHhCCCCCCCHHHH--HcCCCcCCCCHHHHhhccCCCCcCCC
Confidence            9999999999999999875322211  23778888899888777776665554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.7e-41  Score=356.79  Aligned_cols=272  Identities=19%  Similarity=0.300  Sum_probs=217.7

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.++.++      +.||||++.+..   ......+ ..+..++..+.+|+||+.+++++...+.+|+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~-~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~i   73 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESG------RLYAVKVLKKDVILQDDDVECT-MTEKRILSLARNHPFLTQLYCCFQTPDRLFF   73 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCC------CEEEEEEEEHHHHhhccHHHHH-HHHHHHHHhccCCCchhceeeEEEcCCEEEE
Confidence            46999999999999987655      489999986532   1112222 2333445556689999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++| +|.+.+..  .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~Ey~~~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--  149 (320)
T cd05590          74 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--  149 (320)
T ss_pred             EEcCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--
Confidence            9999984 66666643  357999999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       ........||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+.  .....+|..+++++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~  223 (320)
T cd05590         150 -GKTTSTFCGTPDYIAPEILQEM---LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--NDEVVYPTWLSQDA  223 (320)
T ss_pred             -CCcccccccCccccCHHHHcCC---CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHH
Confidence             1222345799999999998743   67889999999999999999999999988888777765  34556778899999


Q ss_pred             HHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          285 ENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .++|.+||+.||.+||++.++...-+-+.++++...+|..+..+...+++.+.
T Consensus       224 ~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~  276 (320)
T cd05590         224 VDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPR  276 (320)
T ss_pred             HHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence            99999999999999999844322223334788999999988777776665544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-41  Score=351.14  Aligned_cols=266  Identities=23%  Similarity=0.341  Sum_probs=217.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++......  ........+..++..+ +||||+.+++++.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~   73 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISE------HYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQ   73 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCC------CEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccC
Confidence            47999999999999999999987655      48999998643211  1122223333444444 689999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||+. |+|.+++..  .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~  151 (291)
T cd05612          74 RFLYMLMEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKL  151 (291)
T ss_pred             CeEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhc
Confidence            99999999998 578777754  357899999999999999999999999999999999999999999999999998764


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ..      .....+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..  ....+|..
T Consensus       152 ~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~--~~~~~~~~  220 (291)
T cd05612         152 RD------RTWTLCGTPEYLAPEVIQSK---GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA--GKLEFPRH  220 (291)
T ss_pred             cC------CcccccCChhhcCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCcCCCcc
Confidence            32      12335789999999998743   578899999999999999999999999888887777653  45567888


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          280 LPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      +++.+.+||.+||+.||.+||+     +.++++      +.++...+|..+..+...++.
T Consensus       221 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~  274 (291)
T cd05612         221 LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN------HRWFKSVDWDDVPQRKLKPPI  274 (291)
T ss_pred             CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc------CccccCCCHHHHhcCCCCCCE
Confidence            8999999999999999999995     777664      677888888877666555443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.1e-40  Score=351.69  Aligned_cols=266  Identities=22%  Similarity=0.357  Sum_probs=213.5

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      +.||+|+||+||+|.++.++      ..||||++++...  .........+..++..+.+|+||+.+++++...+.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv   74 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTD------ELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFV   74 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEE
Confidence            47999999999999987655      4899999975321  111122223334555566899999999999999999999


Q ss_pred             EecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||+. |+|.+.+..  .+.+++..+..++.||+.||.|||+++|+||||||+|||+++++.+||+|||+++.....   
T Consensus        75 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---  149 (318)
T cd05570          75 MEYVNGGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG---  149 (318)
T ss_pred             EcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---
Confidence            99998 566666643  357999999999999999999999999999999999999999999999999998653221   


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......+||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+....+.  ...+.+|..++.++.
T Consensus       150 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~  224 (318)
T cd05570         150 GVTTSTFCGTPDYIAPEILSY---QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL--EDEVRYPRWLSKEAK  224 (318)
T ss_pred             CCcccceecCccccCHHHhcC---CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH--cCCCCCCCcCCHHHH
Confidence            122234578999999999974   368889999999999999999999999888877776655  344567788999999


Q ss_pred             HHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          286 NVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      ++|.+||+.||.+||++     .++++      ++++...+|.....+...++..+
T Consensus       225 ~li~~~l~~dP~~R~s~~~~~~~~ll~------~~~~~~~~~~~~~~~~~~~~~~~  274 (318)
T cd05570         225 SILKSFLTKNPEKRLGCLPTGEQDIKG------HPFFREIDWDKLERKEIKPPFKP  274 (318)
T ss_pred             HHHHHHccCCHHHcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            99999999999999998     66554      67888888887766665555433

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3.1e-40  Score=354.56  Aligned_cols=272  Identities=22%  Similarity=0.351  Sum_probs=214.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||+||+|.++.++      +.||||++.+...  ......+..+..++..+ +|++|+.+++.+..+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~   73 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTG------HVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDK   73 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCC------CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecC
Confidence            57999999999999999999987655      4899999965321  11112233333444444 789999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++.+  .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          74 LNLYLIMEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             CeEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            99999999998 577777754  357999999999999999999999999999999999999999999999999998754


Q ss_pred             cCCCCC--------------------------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHH
Q 006772          200 LGRSLS--------------------------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME  247 (632)
Q Consensus       200 ~~~~~~--------------------------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~E  247 (632)
                      ......                                .......+||+.|||||++.+.   .++.++|+|||||++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~~DvwSlGvil~e  228 (363)
T cd05628         152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYE  228 (363)
T ss_pred             cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC---CCCCchhhhhhHHHHHH
Confidence            221000                                0011245799999999998743   68889999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHhhhcCcC---CCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          248 MLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLR---NRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       248 mltG~~PF~~~~~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~cL~~DP~---~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                      |++|..||.+.+..+.+..+........+|.  .+++++.++|.+++. +|.   .||++.||++      ++++.+.+|
T Consensus       229 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~------hp~f~~~~~  301 (363)
T cd05628         229 MLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT------NPFFEGVDW  301 (363)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC------CCCCCCCCH
Confidence            9999999999888888877765444444554  468999999998664 444   4689999876      789999999


Q ss_pred             cccccccccCC
Q 006772          323 TGLGSRALTDT  333 (632)
Q Consensus       323 ~~~~~~~~~~~  333 (632)
                      +.+..+....+
T Consensus       302 ~~~~~~~~~~~  312 (363)
T cd05628         302 EHIRERPAAIP  312 (363)
T ss_pred             HHHHhCCCCCC
Confidence            98765543333

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=5.6e-42  Score=345.12  Aligned_cols=252  Identities=20%  Similarity=0.321  Sum_probs=204.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +.|+.+.++|+|+||.||+++++.++      +.||||++.....+ ..+...-++..++ +..+|+|++.+..+|....
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~Tg------qIVAIKkF~Esedd~~VkKIAlREIrmL-KqLkH~NLVnLiEVFrrkr   74 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTG------QIVAIKKFVESEDDPVVKKIALREIRML-KQLKHENLVNLIEVFRRKR   74 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcc------cEEEEEeeccCCccHHHHHHHHHHHHHH-HhcccchHHHHHHHHHhcc
Confidence            46888899999999999999998776      49999999754432 2233323333334 4458999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .++||+|||+-++++.+.+.. ..++...+..|+.|++.|+.|+|+++||||||||+||||+.+|.+||||||+|+.+..
T Consensus        75 klhLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   75 KLHLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             eeEEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            999999999999999887765 4689999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-----------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK-----------  270 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~-----------  270 (632)
                      .   ...++..+.|.+|.|||.+.+..  +|...+||||+||++.||++|.+.|.|.+.-+.+..|...           
T Consensus       154 p---gd~YTDYVATRWYRaPELLvGDt--qYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i  228 (396)
T KOG0593|consen  154 P---GDNYTDYVATRWYRAPELLVGDT--QYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI  228 (396)
T ss_pred             C---cchhhhhhhhhhccChhhhcccC--cCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH
Confidence            3   23345567799999999998753  6889999999999999999999999998755443333310           


Q ss_pred             --------ccCCCCC----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 --------KEKPCIP----------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 --------~~~p~~p----------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                              +...+.|          +.++..+.+|+.+||+.||.+|++.+++++
T Consensus       229 F~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  229 FSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             hccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                    0010111          245568899999999999999999999996

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-40  Score=348.90  Aligned_cols=266  Identities=20%  Similarity=0.319  Sum_probs=210.2

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+....   ..++.||||++.+...   .........+..++..+ +||||+.+++.+..++.+|+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGA---DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYL   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccC---CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEE
Confidence            68999999999999875432   2346899999865321   11111222333444444 79999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||+.| +|.+.+..  .+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        78 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  153 (323)
T cd05584          78 ILEYLSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE--  153 (323)
T ss_pred             EEeCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC--
Confidence            9999985 67666654  357889999999999999999999999999999999999999999999999998754221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       ........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+....+.  .....+|..+++++
T Consensus       154 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~  227 (323)
T cd05584         154 -GTVTHTFCGTIEYMAPEILMRS---GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL--KGKLNLPPYLTPEA  227 (323)
T ss_pred             -CCcccccCCCccccChhhccCC---CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHH
Confidence             1122345799999999998743   57889999999999999999999999988777666655  34456788899999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          285 ENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      .++|.+||++||++||     ++.++++      ++++....|..+......+++
T Consensus       228 ~~li~~~l~~~p~~R~~~~~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~  276 (323)
T cd05584         228 RDLLKKLLKRNPSSRLGAGPGDAAEVQS------HPFFRHVNWDDLLARKVEPPF  276 (323)
T ss_pred             HHHHHHHcccCHhHcCCCCCCCHHHHhc------CCCcCCCCHHHHhcCCCCCCc
Confidence            9999999999999999     6777665      677777788777665555443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-42  Score=360.76  Aligned_cols=254  Identities=19%  Similarity=0.292  Sum_probs=209.5

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      -.++|+++++||.|+||.||+|....+++      .||||.+++......+-.--++...+.++..||||+.+..++.++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~------~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~   81 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGE------LVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN   81 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCc------eeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence            34789999999999999999999887664      799999986543332222223334567777899999999999887


Q ss_pred             C-EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 G-KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~-~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      + .+|+|||||+.+|++++..+ ++.|++.+++.|+.||++||+|+|.+|+.||||||+|||+..+..+||+|||+|+.+
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccc
Confidence            7 99999999999999999876 789999999999999999999999999999999999999999999999999999976


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC------
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK------  273 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~------  273 (632)
                      ..    ...++..+.|.+|.|||++..  .+-|+.+.|+|++||+++|+.+-++.|.|.+..+...+|..--..      
T Consensus       161 ~S----kpPYTeYVSTRWYRAPEvLLr--s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~  234 (538)
T KOG0661|consen  161 RS----KPPYTEYVSTRWYRAPEVLLR--SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW  234 (538)
T ss_pred             cc----CCCcchhhhcccccchHHhhh--ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence            43    234556688999999999984  457999999999999999999999999998754433333310000      


Q ss_pred             -----------CCCC-----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 -----------PCIP-----------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 -----------p~~p-----------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                 ..+|           +.+++++.++|.+|++.||.+||++.+.++
T Consensus       235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence                       0111           347789999999999999999999999886

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.8e-40  Score=349.88  Aligned_cols=266  Identities=25%  Similarity=0.382  Sum_probs=213.4

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      +.||+|+||.||+|.++.++      ..||+|++++...  .........+..++....+|++|+.+++++..++.+|+|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   74 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKG------EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFV   74 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEE
Confidence            47999999999999988665      4899999975321  111122223334455566899999999999999999999


Q ss_pred             EecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||+. |+|.+.+..  .+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~  149 (316)
T cd05620          75 MEFLNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF---G  149 (316)
T ss_pred             ECCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc---C
Confidence            99998 577776654  35789999999999999999999999999999999999999999999999999864321   1


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..++...+.  ...+.+|..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  224 (316)
T cd05620         150 DNRASTFCGTPDYIAPEILQGL---KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR--VDTPHYPRWITKESK  224 (316)
T ss_pred             CCceeccCCCcCccCHHHHcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHH
Confidence            1223446799999999999743   68899999999999999999999999988877776654  345667888999999


Q ss_pred             HHHHHhhhcCcCCCCCHH-HHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          286 NVIIGCFEYDLRNRPLMA-DILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~-ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      ++|.+||+.||++||++. ++++      ++++...+|..+......++..+
T Consensus       225 ~li~~~l~~dP~~R~~~~~~~~~------h~~f~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05620         225 DILEKLFERDPTRRLGVVGNIRG------HPFFKTINWTALEKRELDPPFKP  270 (316)
T ss_pred             HHHHHHccCCHHHcCCChHHHHc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            999999999999999974 5443      67788888887766665555444

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.7e-40  Score=349.58  Aligned_cols=266  Identities=21%  Similarity=0.357  Sum_probs=209.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      +.||+|+||+||+|.+..++      +.||+|++++...  .........+..++..+.+|+||+.+++++..++.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv   74 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTE------RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   74 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEE
Confidence            47999999999999987665      4899999975321  111222333445556667899999999999999999999


Q ss_pred             EecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||++ |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....   
T Consensus        75 ~E~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~---  149 (329)
T cd05618          75 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---  149 (329)
T ss_pred             EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---
Confidence            99998 566666543  357999999999999999999999999999999999999999999999999998753221   


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---------CHHHHHHHHHhhccCCCC
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---------SVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---------~~~ei~~~i~~~~~~p~~  276 (632)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||...         ....+...+.  .....+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~--~~~~~~  224 (329)
T cd05618         150 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--EKQIRI  224 (329)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh--cCCCCC
Confidence            1122346799999999999743   6788999999999999999999999521         1112223222  345567


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLM------ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~------~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      |..++.++.++|.+||+.||++||++      .++++      ++++...+|..+..+...+++.+
T Consensus       225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~------hp~f~~~~~~~~~~~~~~~~~~~  284 (329)
T cd05618         225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------HPFFRNVDWDLMEQKQVVPPFKP  284 (329)
T ss_pred             CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc------CCCCCCCCHHHHHcCCCCcCccC
Confidence            88999999999999999999999984      45543      78888899988777666665544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.7e-40  Score=349.56  Aligned_cols=264  Identities=20%  Similarity=0.368  Sum_probs=212.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+..++      ..||+|++.+...   .....+.+ +..++..+ +||||+.+++++..++.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~-E~~~l~~l-~hp~i~~~~~~~~~~~~~~l   72 (323)
T cd05595           1 KLLGKGTFGKVILVREKATG------RYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNT-RHPFLTALKYAFQTHDRLCF   72 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhHHHHHHHH-HHHHHHhC-CCCCCcceeeEEecCCEEEE
Confidence            46999999999999987655      4899999975321   11122222 23344444 78999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        73 v~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--  148 (323)
T cd05595          73 VMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--  148 (323)
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC--
Confidence            999998 566666543  357899999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       ........||+.|||||++.+   +.++.++|+|||||++|||++|..||...+..+....+.  .....+|..+++++
T Consensus       149 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~  222 (323)
T cd05595         149 -GATMKTFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRTLSPEA  222 (323)
T ss_pred             -CCccccccCCcCcCCcccccC---CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHH
Confidence             112234579999999999864   367899999999999999999999999888777766655  34455788999999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++|.+||+.||.+|+     ++.++++      +.++....|.....+.+.+++.+
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~~  273 (323)
T cd05595         223 KSLLAGLLKKDPKQRLGGGPSDAKEVME------HRFFLSINWQDVVQKKLLPPFKP  273 (323)
T ss_pred             HHHHHHHccCCHHHhCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999998     7777775      67888888888776666555544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-40  Score=347.53  Aligned_cols=261  Identities=23%  Similarity=0.405  Sum_probs=209.3

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      ||+|+||.||+|.+..++      +.||+|++.+..   ......+. .+..++..+ +|+||+.+++.+..++..|+||
T Consensus         1 lg~G~~g~Vy~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~-~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   72 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQ------RIYALKTIRKAHIVSRSEVTHTL-AERTVLAQV-NCPFIVPLKFSFQSPEKLYLVL   72 (312)
T ss_pred             CCcCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHH-HHHHHHHhC-CCCcEeceeeEEecCCeEEEEE
Confidence            799999999999987655      489999986432   11122222 233444444 7999999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||++ |+|.+++..  .+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....   .
T Consensus        73 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---~  147 (312)
T cd05585          73 AFINGGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD---D  147 (312)
T ss_pred             cCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC---C
Confidence            9998 577777754  357999999999999999999999999999999999999999999999999998753221   1


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN  286 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~  286 (632)
                      ......+||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+.+..+.  .....+|..+++++.+
T Consensus       148 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  222 (312)
T cd05585         148 DKTNTFCGTPEYLAPELLLG---HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL--QEPLRFPDGFDRDAKD  222 (312)
T ss_pred             CccccccCCcccCCHHHHcC---CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH--cCCCCCCCcCCHHHHH
Confidence            22234579999999999974   368899999999999999999999999988888777665  3456678899999999


Q ss_pred             HHHHhhhcCcCCCCC---HHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          287 VIIGCFEYDLRNRPL---MADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       287 LI~~cL~~DP~~RPs---~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      +|.+||+.||.+||+   +.+++.      ++++...+|..+..+...++..
T Consensus       223 li~~~L~~dp~~R~~~~~~~e~l~------hp~~~~~~~~~~~~~~~~~~~~  268 (312)
T cd05585         223 LLIGLLSRDPTRRLGYNGAQEIKN------HPFFSQLSWKKLLMKGIQPPFK  268 (312)
T ss_pred             HHHHHcCCCHHHcCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcC
Confidence            999999999999986   455554      6778777777666555555443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=2.1e-40  Score=358.08  Aligned_cols=271  Identities=20%  Similarity=0.314  Sum_probs=213.5

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...+..++|++.+.||+|+||.||+|.+...+. .+....||||++...........+..+..++..+..|+||+.+++.
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~  110 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGK-EDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGA  110 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCc-ccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence            334566899999999999999999999765442 2334579999997544333233333444566677689999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhc-----------------------------------------------------
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQR-----------------------------------------------------  142 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~-----------------------------------------------------  142 (632)
                      +...+.+|+||||+. |+|.+++....                                                     
T Consensus       111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (374)
T cd05106         111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS  190 (374)
T ss_pred             ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence            999999999999998 68887775421                                                     


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCC
Q 006772          143 ---------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS  207 (632)
Q Consensus       143 ---------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~  207 (632)
                                     ..++++..++.++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++....... ..
T Consensus       191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-~~  269 (374)
T cd05106         191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-YV  269 (374)
T ss_pred             ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-ee
Confidence                           13578889999999999999999999999999999999999999999999999876532211 01


Q ss_pred             ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006772          208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN  286 (632)
Q Consensus       208 ~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~  286 (632)
                      ......++..|||||++..   ..++.++|||||||++|||++ |+.||..................+..|..+|+++.+
T Consensus       270 ~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (374)
T cd05106         270 VKGNARLPVKWMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYS  346 (374)
T ss_pred             eccCCCCccceeCHHHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHH
Confidence            1112235678999999863   468899999999999999997 999998876554444444444455567778999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          287 VIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       287 LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ++.+||+.||.+||++.++++.|+.+
T Consensus       347 li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         347 IMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.7e-40  Score=349.34  Aligned_cols=265  Identities=22%  Similarity=0.363  Sum_probs=208.6

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      +.||+|+||.||+|.+..++      +.||||++++...  .........+..++..+.+|+||+.+++++..++.+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv   74 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTR------RIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFV   74 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEE
Confidence            46999999999999987665      4899999975321  111222344455666777899999999999999999999


Q ss_pred             EecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....   
T Consensus        75 ~e~~~~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---  149 (329)
T cd05588          75 IEFVSGGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---  149 (329)
T ss_pred             EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC---
Confidence            99998 477666643  358999999999999999999999999999999999999999999999999998743221   


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC---------HHHHHHHHHhhccCCCC
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---------VEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~---------~~ei~~~i~~~~~~p~~  276 (632)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|+.||....         .......+.  .....+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  224 (329)
T cd05588         150 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL--EKQIRI  224 (329)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH--cCCCCC
Confidence            1223346799999999999743   67889999999999999999999996321         112333332  345567


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCC------HHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPL------MADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs------~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      |..++.++.++|.+||+.||.+|++      +.++++      ++++...+|.....+...++..
T Consensus       225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~------hp~~~~~~~~~~~~~~~~~~~~  283 (329)
T cd05588         225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS------HPFFRNIDWDLLEQKQVLPPYK  283 (329)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc------CCCCCCCCHHHHHhCCCCCCcc
Confidence            8899999999999999999999998      455543      7788888898776555544433

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-41  Score=367.63  Aligned_cols=277  Identities=25%  Similarity=0.387  Sum_probs=219.2

Q ss_pred             cccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhh
Q 006772           25 HLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFP  102 (632)
Q Consensus        25 ~~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~  102 (632)
                      ..+..-+........|..+++.+..+||+|.||+||+|.|+.         .||||+++...  .+..+.|.++. ..+ 
T Consensus       374 ~~~~r~~s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---------dVAVK~Lnv~~pt~~qlqaFKnEV-a~l-  442 (678)
T KOG0193|consen  374 SGKNRQASDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---------DVAVKLLNVDDPTPEQLQAFKNEV-AVL-  442 (678)
T ss_pred             ccccccCCccccccccCHHHhhccceeccccccceeeccccc---------ceEEEEEecCCCCHHHHHHHHHHH-HHH-
Confidence            333333334444555888999999999999999999999975         69999997543  33444444443 333 


Q ss_pred             hccCCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       103 ~l~~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      +..+|.||+.+.|++...+. .||+.+|+|+.+..+.+....+|.+...+.|+.||++|+.|||.++|||||||..||||
T Consensus       443 kkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl  521 (678)
T KOG0193|consen  443 KKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL  521 (678)
T ss_pred             hhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE
Confidence            34579999999999987766 99999999854444444445789999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE  262 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e  262 (632)
                      .+++++||+||||+..-.-- ..........|...|||||+++.+...+|++.+|||||||++|||++|..||.....++
T Consensus       522 ~~~~kVkIgDFGLatvk~~w-~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq  600 (678)
T KOG0193|consen  522 HEDLKVKIGDFGLATVKTRW-SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ  600 (678)
T ss_pred             ccCCcEEEecccceeeeeee-ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh
Confidence            99999999999998642111 11122333467899999999986667799999999999999999999999999777777


Q ss_pred             HHHHHHhhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          263 IYHSVVIKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       263 i~~~i~~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +..++-.+...+.   ....++.++++|+..||.+++++||.+.+|+..|+.+..
T Consensus       601 IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  601 IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             eEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            7666554433333   336788999999999999999999999999998877654

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=8.9e-40  Score=352.64  Aligned_cols=279  Identities=22%  Similarity=0.383  Sum_probs=220.3

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..++.++|++.+.||+|+||.||+|.+..++      ..||+|++.+..  .........++..++.. .+|+||+.+++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~-~~h~~iv~~~~  110 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSK------QVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQLHY  110 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCcceEEE
Confidence            3456789999999999999999999987665      489999986421  11112222333344444 47999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++.+|+||||++ |+|.+++..   ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG  187 (370)
T cd05596         111 AFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG  187 (370)
T ss_pred             EEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEecc
Confidence            9999999999999998 577776643   368999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCC-CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      ++........  ......+||+.|||||++.... ...++.++|+|||||++|||++|..||.+.+....+..+......
T Consensus       188 ~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  265 (370)
T cd05596         188 TCMKMDANGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS  265 (370)
T ss_pred             ceeeccCCCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc
Confidence            9876533211  1123457999999999986532 234789999999999999999999999998888777777654444


Q ss_pred             CCCCC--CCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          274 PCIPS--GLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       274 p~~p~--~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      ..+|.  .++.++.++|.+||+.+|.+  |+++.++++      ++++.+.+|.....+...++.
T Consensus       266 ~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~------h~~~~~~~~~~~~~~~~~~~~  324 (370)
T cd05596         266 LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS------HPFFKNDQWTFDNIRETVAPV  324 (370)
T ss_pred             CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc------CcccCCCChhhHHhcCCCcCc
Confidence            55554  57999999999999999988  999999887      677877777754444444443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=4e-40  Score=349.16  Aligned_cols=264  Identities=21%  Similarity=0.368  Sum_probs=212.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+..++      +.||+|++.+..   ......+.++ ..++.. .+|+||+.+++.+..++.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E-~~~l~~-l~hp~iv~~~~~~~~~~~~~l   72 (328)
T cd05593           1 KLLGKGTFGKVILVREKASG------KYYAMKILKKEVIIAKDEVAHTLTE-SRVLKN-TRHPFLTSLKYSFQTKDRLCF   72 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHH-HHHHHh-CCCCCCcceEEEEEcCCEEEE
Confidence            46999999999999987655      489999997532   1222222232 233443 478999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+.+..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        73 v~Ey~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--  148 (328)
T cd05593          73 VMEYVNGGELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--  148 (328)
T ss_pred             EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--
Confidence            999998 567666644  357999999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+....+.  .....+|..+++++
T Consensus       149 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~  222 (328)
T cd05593         149 -AATMKTFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEDIKFPRTLSADA  222 (328)
T ss_pred             -ccccccccCCcCccChhhhcC---CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc--cCCccCCCCCCHHH
Confidence             122234579999999999874   367899999999999999999999999888777666554  34556788999999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++|.+||+.||++|+     ++.++++      +.++.+.+|..+......+++.+
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~il~------h~~~~~~~~~~~~~~~~~~~~~~  273 (328)
T cd05593         223 KSLLSGLLIKDPNKRLGGGPDDAKEIMR------HSFFTGVNWQDVYDKKLVPPFKP  273 (328)
T ss_pred             HHHHHHHcCCCHHHcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999997     7888775      67888888887776665555443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=4.3e-40  Score=347.15  Aligned_cols=266  Identities=25%  Similarity=0.422  Sum_probs=214.4

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||+||+|.+..++      +.||||++++..   ........ .+..++....+||||+.+++++..++.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-~e~~~l~~~~~hp~iv~~~~~~~~~~~~~l   73 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTN------QFFAIKALKKDVVLMDDDVECTM-VEKRVLSLAWEHPFLTHLYCTFQTKENLFF   73 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhcchHHHHH-HHHHHHHhccCCCcCcceEEEEEeCCEEEE
Confidence            47999999999999987665      489999987532   11122222 233445555689999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++ |+|.+.+..  ...+++.++..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--  149 (316)
T cd05619          74 VMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--  149 (316)
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--
Confidence            999998 577777654  347899999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       ........||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+....+.  ...+.+|..++.++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~  223 (316)
T cd05619         150 -DAKTCTFCGTPDYIAPEILLGQ---KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR--MDNPCYPRWLTREA  223 (316)
T ss_pred             -CCceeeecCCccccCHHHHcCC---CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHH
Confidence             1222345799999999998743   68899999999999999999999999988877776654  34456778899999


Q ss_pred             HHHHHHhhhcCcCCCCCHH-HHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          285 ENVIIGCFEYDLRNRPLMA-DILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~-ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .+++.+||+.||.+||++. +++.      ++++...+|..+..+...++..+.
T Consensus       224 ~~li~~~l~~~P~~R~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~~~~  271 (316)
T cd05619         224 KDILVKLFVREPERRLGVKGDIRQ------HPFFREIDWSALEEREIEPPFKPK  271 (316)
T ss_pred             HHHHHHHhccCHhhcCCChHHHHc------CcccCCCCHHHHHhCCCCCCcCCC
Confidence            9999999999999999986 5443      677888888877766666665443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=3.3e-41  Score=378.32  Aligned_cols=268  Identities=22%  Similarity=0.391  Sum_probs=228.9

Q ss_pred             CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           35 QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        35 ~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ...-.|.+.+.++.+.||+|.||+||+|+...... ......||||.++.......+..++++.+++..+ +|+||++|+
T Consensus       478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p-~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLl  555 (774)
T KOG1026|consen  478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLP-GQDEQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLL  555 (774)
T ss_pred             cceeEechhheeehhhhcCchhhhhhhhhccCCCC-CccceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEE
Confidence            33445888999999999999999999998765442 1344689999999877764555555555666665 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhc--------CC----CCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEE
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQR--------GG----KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLL  181 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------~~----~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NIL  181 (632)
                      |+|..++.+|+|+|||. |+|.+++....        +.    +++..+.+.++.|||.|++||-++.+|||||..+|+|
T Consensus       556 GVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCL  635 (774)
T KOG1026|consen  556 GVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCL  635 (774)
T ss_pred             EEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhce
Confidence            99999999999999998 99999887542        12    2888999999999999999999999999999999999


Q ss_pred             EecCCcEEEEecCCceeccCCCCCCCcccccc----CCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCC
Q 006772          182 LSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF  256 (632)
Q Consensus       182 ld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~----GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~  256 (632)
                      |+++-.+||+|||+++-.-..     +++...    -.++|||||.+.   +++||.+||||||||+|||+++ |+.||.
T Consensus       636 Vge~l~VKIsDfGLsRdiYss-----DYYk~~~~t~lPIRWMppEsIl---y~kFTteSDVWs~GVvLWEIFsyG~QPy~  707 (774)
T KOG1026|consen  636 VGENLVVKISDFGLSRDIYSS-----DYYKVRGNTLLPIRWMPPESIL---YGKFTTESDVWSFGVVLWEIFSYGKQPYY  707 (774)
T ss_pred             eccceEEEecccccchhhhhh-----hhhcccCCceeeeecCCHHHhh---cCcccchhhhhhhhhhhhhhhccccCccc
Confidence            999999999999999865332     222222    267999999997   7899999999999999999999 999999


Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       257 ~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +.+.++..+.+..+.. ..-|..||.++.+||..||+.+|.+||+++||-..|+.+.
T Consensus       708 glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~  763 (774)
T KOG1026|consen  708 GLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA  763 (774)
T ss_pred             ccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence            9999999988876666 5569999999999999999999999999999999998765

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.2e-39  Score=352.45  Aligned_cols=266  Identities=21%  Similarity=0.268  Sum_probs=206.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +.|++++.||+|+||+||+|.+..++      +.||||++.+...  ......+..+..++..+ +|+||+.+++.+.++
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~   73 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTH------ALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDK   73 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecC
Confidence            36999999999999999999987665      4899999965321  11122223333444444 789999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||++ |+|.+++.+.  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++++||+|||+++..
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          74 DNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             CEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            99999999998 5777777543  47899999999999999999999999999999999999999999999999997532


Q ss_pred             cCCCC--------------------------------------------CCCccccccCCCccCCccccCCCCCCCCCcc
Q 006772          200 LGRSL--------------------------------------------SDSDMALRLGTPNYMAPEQWEPEVRGPISFE  235 (632)
Q Consensus       200 ~~~~~--------------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~k  235 (632)
                      .....                                            ........+||+.|||||++.+   ..++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~  228 (381)
T cd05626         152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR---KGYTQL  228 (381)
T ss_pred             ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC---CCCCCc
Confidence            10000                                            0000123579999999999874   368899


Q ss_pred             cccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHh--hhcCcCCCCCHHHHHHHHHh
Q 006772          236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGC--FEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       236 sDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~c--L~~DP~~RPs~~ell~~Le~  311 (632)
                      +|||||||++|||++|..||...+..+....+........+|.  .+++++.+||.+|  +..+|..|+++.+++.    
T Consensus       229 ~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~----  304 (381)
T cd05626         229 CDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA----  304 (381)
T ss_pred             cceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc----
Confidence            9999999999999999999998887666555553333334443  6899999999994  4556666999999886    


Q ss_pred             hhhcccCCCCccccc
Q 006772          312 SQNAVYNDGEWTGLG  326 (632)
Q Consensus       312 ~~~~~~~~~~w~~~~  326 (632)
                        ++++...+|....
T Consensus       305 --hp~f~~~~~~~~~  317 (381)
T cd05626         305 --HPFFSEVDFSSDI  317 (381)
T ss_pred             --CcccCCCChhHHh
Confidence              7788888887543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-41  Score=332.15  Aligned_cols=252  Identities=21%  Similarity=0.315  Sum_probs=219.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ....++|++++.||+|-||.||+|+.+++.      ..||+|++.+..  ....+..++++.++.+. .+||||.+++++
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekks~------~IvalKVlfKsqi~~~~v~~qlrREiEIqs~-L~hpnilrlY~~   90 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSL------FIVALKVLFKSQILKTQVEHQLRREIEIQSH-LRHPNILRLYGY   90 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeeccCC------cEEEEeeeeHHHHHHhcchhhhhheeEeecc-cCCccHHhhhhh
Confidence            446789999999999999999999998776      389999997643  22233334444444333 479999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      |.++..+||++||.. |+++..+.....+++++..+..|..|+|.||.|+|.++||||||||+|+|++..|..|++|||-
T Consensus        91 fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGw  170 (281)
T KOG0580|consen   91 FHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGW  170 (281)
T ss_pred             eeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCc
Confidence            999999999999997 8999999877778999999999999999999999999999999999999999999999999998


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +-...     .....+.|||..|++||...+.   .++..+|+|++|+++||++.|.+||...+..+.+..|.  ..+..
T Consensus       171 sV~~p-----~~kR~tlcgt~dyl~pEmv~~~---~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~--k~~~~  240 (281)
T KOG0580|consen  171 SVHAP-----SNKRKTLCGTLDYLPPEMVEGR---GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR--KVDLK  240 (281)
T ss_pred             eeecC-----CCCceeeecccccCCHhhcCCC---CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH--Hcccc
Confidence            75432     2334567999999999999855   68899999999999999999999999999889998876  56677


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|+.++.+++++|.+|+.++|.+|....|++.
T Consensus       241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  241 FPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             CCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            88999999999999999999999999999886

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.6e-39  Score=350.89  Aligned_cols=278  Identities=23%  Similarity=0.391  Sum_probs=216.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +..++|++.+.||+|+||.||+|.+..++      +.||+|++.+...  ........++..++ +..+||||+.+++.+
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~i~-~~~~hp~iv~~~~~~  112 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQ------KVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFCAF  112 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhhHHHHHHHHHHH-HhCCCCCEeeEEEEE
Confidence            45689999999999999999999987665      4899999864211  11122233333443 445799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..++.+|+||||++ |+|.+++..   ..+++..+..++.||+.||+|||+++|+||||||+|||+++++.+||+|||++
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a  189 (370)
T cd05621         113 QDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC  189 (370)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccc
Confidence            99999999999998 577777643   36899999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCC-CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  ......+||+.|||||++.... .+.++.++|+|||||+||||++|..||.+.+....+..+........
T Consensus       190 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~  267 (370)
T cd05621         190 MKMDETGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN  267 (370)
T ss_pred             eecccCCc--eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC
Confidence            86532211  1223467999999999986432 13478899999999999999999999999888777777765444455


Q ss_pred             CCC--CCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          276 IPS--GLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       276 ~p~--~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      +|.  .++..+++++.+||..++.+  |+++.++++      ++++....|.....+...++..
T Consensus       268 ~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~------hp~~~~~~~~~~~~~~~~~~~~  325 (370)
T cd05621         268 FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ------HPFFKNDQWNWDNIRETAAPVV  325 (370)
T ss_pred             CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc------CcccCCCCcChHhcCCCCCCcC
Confidence            554  56999999999999855543  889999876      6777666565433333334433

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=5.6e-40  Score=354.80  Aligned_cols=287  Identities=21%  Similarity=0.301  Sum_probs=218.1

Q ss_pred             CCcccccccCCCccccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHH
Q 006772           12 ASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK   91 (632)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~   91 (632)
                      ....|+.++..-+..        .....++.++|++.+.||+|+||+||+|++..... .+....||||+++........
T Consensus        12 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~-~~~~~~vavK~l~~~~~~~~~   82 (375)
T cd05104          12 NGNNYVYIDPTQLPY--------DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFK-SDAAMTVAVKMLKPSAHLTER   82 (375)
T ss_pred             cCceEEEecCCCCCC--------ccccccchHHeehhheecCCccceEEEEEEecccc-CccceeEEEEeccCCcCcHHH
Confidence            344666666543322        22334556789999999999999999998643211 123458999999754332222


Q ss_pred             HHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhc----------------------------
Q 006772           92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR----------------------------  142 (632)
Q Consensus        92 ~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~----------------------------  142 (632)
                      ..+.++..++..+.+||||+.+++++..++..++||||++ |+|.+++....                            
T Consensus        83 ~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (375)
T cd05104          83 EALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSC  162 (375)
T ss_pred             HHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccc
Confidence            3333344566667689999999999999999999999998 68888775421                            


Q ss_pred             ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeC
Q 006772          143 ---------------------------------------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKP  177 (632)
Q Consensus       143 ---------------------------------------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP  177 (632)
                                                                   ...+++..++.++.||+.||+|||+++|+||||||
T Consensus       163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  242 (375)
T cd05104         163 DSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAA  242 (375)
T ss_pred             hhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCch
Confidence                                                         12478889999999999999999999999999999


Q ss_pred             CeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCC
Q 006772          178 SNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF  256 (632)
Q Consensus       178 ~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~  256 (632)
                      +|||++.++.+||+|||+++........ .......++..|||||++.+   ..++.++|+|||||++|||++ |..||.
T Consensus       243 ~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~sDi~slG~~l~ellt~g~~p~~  318 (375)
T cd05104         243 RNILLTHGRITKICDFGLARDIRNDSNY-VVKGNARLPVKWMAPESIFN---CVYTFESDVWSYGILLWEIFSLGSSPYP  318 (375)
T ss_pred             hhEEEECCCcEEEecCccceeccCcccc-cccCCCCCCcceeChhHhcC---CCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999765332111 11112235678999999864   368899999999999999998 899998


Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       257 ~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      .................+..|...+.++.+|+.+||+.||++||++.+|++.|+.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         319 GMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            8664443334444444555667789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=6.5e-40  Score=347.21  Aligned_cols=273  Identities=21%  Similarity=0.327  Sum_probs=212.6

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      +.||+|+||+||+|.+..++      +.||+|++.+....  ........+..++.++.+|++|+.+++++...+.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   74 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKND------QIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLV   74 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEE
Confidence            47999999999999987665      48999999753221  12222344445667777899999999999999999999


Q ss_pred             EecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....   
T Consensus        75 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---  149 (327)
T cd05617          75 IEYVNGGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP---  149 (327)
T ss_pred             EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---
Confidence            99998 567666643  357999999999999999999999999999999999999999999999999998753221   


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC------CH-HHHHHHHHhhccCCCCCC
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK------SV-EEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~------~~-~ei~~~i~~~~~~p~~p~  278 (632)
                      .......+||+.|+|||++.+   ..++.++|+|||||++|||++|..||...      .. ......+.  .....+|.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~p~  224 (327)
T cd05617         150 GDTTSTFCGTPNYIAPEILRG---EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL--EKPIRIPR  224 (327)
T ss_pred             CCceecccCCcccCCHHHHCC---CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH--hCCCCCCC
Confidence            122234679999999999874   36788999999999999999999999642      12 22333332  34455788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .++..+.+++.+||+.||++|+++.+....-+-..++++...+|+.+..+...+++.+.
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~  283 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQ  283 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCC
Confidence            89999999999999999999998542221112223778999999988877777665543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.8e-40  Score=347.90  Aligned_cols=269  Identities=25%  Similarity=0.407  Sum_probs=210.5

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||++.+....   ..++.||+|++.+..... .......+..++.++ +|+||+.+++++..++.+|+||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   77 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGP---DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLIL   77 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEE
Confidence            57999999999999875322   234689999997532211 111122233444554 6899999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||++ |+|.+++..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....   .
T Consensus        78 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---~  152 (318)
T cd05582          78 DFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---E  152 (318)
T ss_pred             cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC---C
Confidence            9998 677777754  357899999999999999999999999999999999999999999999999998754321   1


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN  286 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~  286 (632)
                      ......+||+.|||||++.+.   .++.++|+|||||++|||++|+.||.+.+..+....+.  .....+|..+++++.+
T Consensus       153 ~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~  227 (318)
T cd05582         153 KKAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL--KAKLGMPQFLSPEAQS  227 (318)
T ss_pred             CceecccCChhhcCHHHHcCC---CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHH
Confidence            222346799999999998743   57889999999999999999999999988777776655  3445678889999999


Q ss_pred             HHHHhhhcCcCCCCCHHH--HHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          287 VIIGCFEYDLRNRPLMAD--ILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       287 LI~~cL~~DP~~RPs~~e--ll~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      +|++||+.||++||++.+  +.+.+   .+.++...+|..+..+...++.
T Consensus       228 li~~~l~~~P~~R~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  274 (318)
T cd05582         228 LLRALFKRNPANRLGAGPDGVEEIK---RHPFFSTIDWNKLYRREIKPPF  274 (318)
T ss_pred             HHHHHhhcCHhHcCCCCCCCHHHHh---CCCCcCCCCHHHHHhcCCCCCc
Confidence            999999999999999655  22222   3667888888877665555444

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.9e-40  Score=346.72  Aligned_cols=259  Identities=22%  Similarity=0.390  Sum_probs=209.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+...   .....+.+ +..++..+ .|+||+.+++++..
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~-e~~~l~~~-~h~~iv~~~~~~~~   72 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTG------EIVALKRMKKSLLFKLNEVRHVLT-ERDILTTT-KSEWLVKLLYAFQD   72 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhHHHHHHH-HHHHHHhC-CCCCCccEEEEEEc
Confidence            47999999999999999999987665      4899999865321   11222222 33444444 59999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..||||||++ |+|.+++..  .+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        73 ~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~  150 (333)
T cd05600          73 DEYLYLAMEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKG  150 (333)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcc
Confidence            999999999998 577777754  35789999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC-
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP-  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p-  277 (632)
                      ...      ......||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+.+..+.........| 
T Consensus       151 ~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  221 (333)
T cd05600         151 IVT------YANSVVGSPDYMAPEVLRGK---GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPV  221 (333)
T ss_pred             ccc------ccCCcccCccccChhHhcCC---CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCC
Confidence            432      22345789999999998743   68899999999999999999999999988877766655322222222 


Q ss_pred             -----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccc
Q 006772          278 -----SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       278 -----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                           ..+++++.++|.+||..+|.+||++.++++      ++++.+.+|..+.
T Consensus       222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~------h~~~~~~~~~~~~  269 (333)
T cd05600         222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN------HPFFKEVDWNELR  269 (333)
T ss_pred             CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh------CcccCCCCHHHHh
Confidence                 256899999999999999999999999887      6677777776644

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=5.7e-40  Score=346.89  Aligned_cols=269  Identities=24%  Similarity=0.385  Sum_probs=212.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||+||+|.+..++      +.||+|++.+...   .....+..+. ..+.+..+|+||+.+++.+..++.+|+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~~l~~~~hp~iv~~~~~~~~~~~~~l   73 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDG------KCYAVKVLQKKIVLNRKEQKHIMAER-NVLLKNVKHPFLVGLHYSFQTTEKLYF   73 (325)
T ss_pred             CceeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHH-HHHHHhCCCCCCccEEEEEecCCEEEE
Confidence            46999999999999987655      4899999865321   1222223332 233344579999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||+.| +|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--  149 (325)
T cd05604          74 VLDFVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--  149 (325)
T ss_pred             EEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--
Confidence            9999985 66666543  457999999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|||||++.+   ..++.++|+|||||++|||++|..||.+.+..+++..+..  ....++...+.++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~  223 (325)
T cd05604         150 -SDTTTTFCGTPEYLAPEVIRK---QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH--KPLVLRPGASLTA  223 (325)
T ss_pred             -CCCcccccCChhhCCHHHHcC---CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc--CCccCCCCCCHHH
Confidence             112234579999999999874   3678899999999999999999999999888887776653  3344566789999


Q ss_pred             HHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++|.+||+.||.+||++.+.++.+  +.++++....|..+..+.+.++..+
T Consensus       224 ~~ll~~ll~~~p~~R~~~~~~~~~i--~~h~~f~~~~~~~~~~~~~~~~~~~  273 (325)
T cd05604         224 WSILEELLEKDRQRRLGAKEDFLEI--QEHPFFESLSWTDLEQKKIPPPFNP  273 (325)
T ss_pred             HHHHHHHhccCHHhcCCCCCCHHHH--hcCCCcCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999999876433322  2367888888888776666555444

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.7e-40  Score=347.52  Aligned_cols=269  Identities=23%  Similarity=0.378  Sum_probs=211.7

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+..++      +.||+|++.+...   .....+..+...+ .+...|+||+.+++.+..++.+|+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~-l~~~~h~~Iv~~~~~~~~~~~~~l   73 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEE------KFYAVKVLQKKAILKKKEEKHIMSERNVL-LKNVKHPFLVGLHFSFQTADKLYF   73 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHHHhhhHHHHHHHHHHHH-HHhCCCCCCCceeEEEEcCCeEEE
Confidence            46999999999999987655      4899999865321   1112222332222 334579999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||+.| +|.+.+..  .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--  149 (325)
T cd05602          74 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--  149 (325)
T ss_pred             EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC--
Confidence            9999985 67666643  357889999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|||||++.+   ..++.++|||||||++|||++|..||.+.+..+.+..+..  ....++..+++.+
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~  223 (325)
T cd05602         150 -NGTTSTFCGTPEYLAPEVLHK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--KPLQLKPNITNSA  223 (325)
T ss_pred             -CCCcccccCCccccCHHHHcC---CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh--CCcCCCCCCCHHH
Confidence             122344679999999999874   3688899999999999999999999999888877776653  3444567899999


Q ss_pred             HHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++|.+||++||.+||++.+.+..+  ..+.++...+|+.+......++..+
T Consensus       224 ~~li~~~l~~~p~~R~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~  273 (325)
T cd05602         224 RHLLEGLLQKDRTKRLGAKDDFMEI--KNHIFFSPINWDDLINKKITPPFNP  273 (325)
T ss_pred             HHHHHHHcccCHHHCCCCCCCHHHH--hcCcccCCCCHHHHHhCCCCcCcCC
Confidence            9999999999999999887544322  2356778888988776655555433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-41  Score=387.25  Aligned_cols=279  Identities=23%  Similarity=0.389  Sum_probs=232.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecC---CchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---LKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~---~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      +.+++|.+++.||+|+||.|.+++++.++.      .||+|++.+   .+... -.++.++..++.. .+.+=|+.++..
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~------VYAMK~lnK~eMlKr~~-tA~F~EERDimv~-~ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHKSTEK------VYAMKILNKWEMLKRAE-TACFREERDIMVF-GNSEWIVQLHYA  143 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEeecccc------chhHHHhhHHHHhhchh-HHHHHHHhHHHHc-CCcHHHHHHHHH
Confidence            677999999999999999999999998774      899999976   22222 2344555555443 346778999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      |+++.++|+|||||+ |+|+.++...  .++|+..+++|+.+|+.||.-||+.|+|||||||+|||||.+|++||+|||.
T Consensus       144 FQD~~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGs  221 (1317)
T KOG0612|consen  144 FQDERYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGS  221 (1317)
T ss_pred             hcCccceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchh
Confidence            999999999999998 5777777554  3899999999999999999999999999999999999999999999999998


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +-.+...+..  .....+|||.|++||++...  ..|.|+..+||||+||++|||+.|..||+.++..+.|..|+.....
T Consensus       222 Clkm~~dG~V--~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~  299 (1317)
T KOG0612|consen  222 CLKMDADGTV--RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES  299 (1317)
T ss_pred             HHhcCCCCcE--EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence            8666543222  22345899999999999743  2367999999999999999999999999999999999999988888


Q ss_pred             CCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCC
Q 006772          274 PCIP--SGLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGY  339 (632)
Q Consensus       274 p~~p--~~lp~~l~~LI~~cL~~DP~~RPs---~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  339 (632)
                      ..||  ..+|.++++||.+++. +|+.|.+   +.+|..      |+||.+++|+.+.  ...+|+.|...
T Consensus       300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~------HpFF~g~~W~~iR--~~~pP~vPevs  361 (1317)
T KOG0612|consen  300 LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN------HPFFEGIDWDNIR--ESVPPVVPEVS  361 (1317)
T ss_pred             cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh------CccccCCChhhhh--hcCCCCCCcCC
Confidence            8888  5689999999999887 8899987   888776      8899999997654  45666655433

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.2e-39  Score=333.73  Aligned_cols=260  Identities=17%  Similarity=0.300  Sum_probs=206.4

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |+.++|++.+.||+|+||.||+|.++...   .....||+|+++....... ..+.++. ..+..+ +|+||+.+++++.
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~---~~~~~vaik~~~~~~~~~~~~~~~~e~-~~l~~l-~h~~iv~~~~~~~   76 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPS---KRELPVAIHTLRAGCSDKQRRGFLAEA-LTLGQF-DHSNIVRLEGVIT   76 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCC---CceeeEEEEecCCCCCHHHHHHHHHHH-HHHhcC-CCCCcCeEEEEEe
Confidence            56789999999999999999999876432   2346899999876433222 2333333 334443 7999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..++||||++| +|.+++.. ....+++.+++.++.||+.||+|||+++++||||||+|||++.++.++++|||.+.
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~  155 (266)
T cd05064          77 RGNTMMIVTEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ  155 (266)
T ss_pred             cCCCcEEEEEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence            99999999999996 55555543 34578999999999999999999999999999999999999999999999999875


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .......  .......++..|+|||.+.+   +.++.++|+|||||++||+++ |..||.+.+..+....+.. ...+..
T Consensus       156 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~  229 (266)
T cd05064         156 EDKSEAI--YTTMSGKSPVLWAAPEAIQY---HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVED-GFRLPA  229 (266)
T ss_pred             cccccch--hcccCCCCceeecCHHHHhh---CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC-CCCCCC
Confidence            4321111  11112235678999999864   468899999999999999875 9999998887776665543 344456


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      |..+|..+.+++.+||+.+|.+||++.+|++.|+.
T Consensus       230 ~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            78899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.8e-41  Score=361.61  Aligned_cols=248  Identities=23%  Similarity=0.390  Sum_probs=214.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|.+.+.||+|+||.||+|+.+.+.      +.||||.+.+..... .-.-++++.+++..+ +||||+.++..|+...
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~------~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~   74 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTI------QVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSA   74 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccce------eEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccc
Confidence            57889999999999999999987665      489999997754322 222233444555554 7999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .+|+|+||+.|+|..++..  .+.++++.+..++.|++.||.|||+++|+|||+||.|||++..|++|++|||+|+.+..
T Consensus        75 ~~~vVte~a~g~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~  152 (808)
T KOG0597|consen   75 HLWVVTEYAVGDLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST  152 (808)
T ss_pred             eEEEEehhhhhhHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence            9999999999998888865  46899999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                         .....+...|||.|||||++.+   .+|+..+|+|||||++|||++|++||...+..++...|.  .++...|...+
T Consensus       153 ---~t~vltsikGtPlYmAPElv~e---~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~--~d~v~~p~~~S  224 (808)
T KOG0597|consen  153 ---NTSVLTSIKGTPLYMAPELVEE---QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSIL--KDPVKPPSTAS  224 (808)
T ss_pred             ---CceeeeeccCcccccCHHHHcC---CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh--cCCCCCccccc
Confidence               2233456789999999999984   489999999999999999999999999988888887776  45666688999


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+.+++..+|.+||.+|.+..+++.
T Consensus       225 ~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  225 SSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHHHHHHhhcChhhcccHHHHhc
Confidence            99999999999999999999999884

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-39  Score=350.31  Aligned_cols=264  Identities=21%  Similarity=0.344  Sum_probs=207.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+...  ......+..+..++.. .+|+||+.+++++..+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~~~   73 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTG------KIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLYYSFQDA   73 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCC------CEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh-CCCCCcceEEEEEEcC
Confidence            47999999999999999999988765      4899999865321  1111222333344444 4799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++..  .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          74 QYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             CeeEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            99999999997 677777754  357899999999999999999999999999999999999999999999999998632


Q ss_pred             cCCCC------------CC--------------------------------CccccccCCCccCCccccCCCCCCCCCcc
Q 006772          200 LGRSL------------SD--------------------------------SDMALRLGTPNYMAPEQWEPEVRGPISFE  235 (632)
Q Consensus       200 ~~~~~------------~~--------------------------------~~~~~~~GT~~YmAPE~~~~~~~g~~t~k  235 (632)
                      .....            ..                                ......+||+.|||||++.+.   .++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  228 (377)
T cd05629         152 HKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ---GYGQE  228 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC---CCCCc
Confidence            11000            00                                000124699999999998743   68899


Q ss_pred             cccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHhhhcCcCCC---CCHHHHHHHHH
Q 006772          236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNR---PLMADILHAFE  310 (632)
Q Consensus       236 sDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~cL~~DP~~R---Ps~~ell~~Le  310 (632)
                      +|+|||||++|||++|..||.+.+..+.+..+........+|.  .++.++.+||.+||. +|.+|   +++.+++.   
T Consensus       229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~---  304 (377)
T cd05629         229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS---  304 (377)
T ss_pred             eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc---
Confidence            9999999999999999999998888777776654333444454  578999999999997 77776   48888776   


Q ss_pred             hhhhcccCCCCcccc
Q 006772          311 SSQNAVYNDGEWTGL  325 (632)
Q Consensus       311 ~~~~~~~~~~~w~~~  325 (632)
                         ++++.+.+|+.+
T Consensus       305 ---hp~~~~~~~~~~  316 (377)
T cd05629         305 ---HPFFRGVDWDTI  316 (377)
T ss_pred             ---CCCcCCCCHHHH
Confidence               778888888765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=4.5e-40  Score=347.65  Aligned_cols=263  Identities=21%  Similarity=0.375  Sum_probs=210.0

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|.+..++      +.||+|++.+...   .....+.. +..++.. .+|+||+.+++.+..++.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~-e~~~l~~-~~hp~i~~~~~~~~~~~~~~l   72 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATG------RYYAMKILKKEVIVAKDEVAHTLT-ENRVLQN-SRHPFLTALKYSFQTHDRLCF   72 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHH-HHHHHHh-CCCCCCCceEEEEEcCCEEEE
Confidence            46999999999999987655      4899999975321   11222222 2233333 478999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      ||||++| +|.+.+..  .+.+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        73 v~E~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-  149 (325)
T cd05594          73 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-  149 (325)
T ss_pred             EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-
Confidence            9999984 66665543  3579999999999999999999998 79999999999999999999999999998754221 


Q ss_pred             CCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHH
Q 006772          204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA  283 (632)
Q Consensus       204 ~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~  283 (632)
                        ........||+.|||||++.+   ..++.++|+|||||++|||++|..||.+.+..+....+.  .....+|..++++
T Consensus       150 --~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~  222 (325)
T cd05594         150 --GATMKTFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLSPE  222 (325)
T ss_pred             --CcccccccCCcccCCHHHHcc---CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHH
Confidence              112234579999999999864   367899999999999999999999999988777766654  3455678889999


Q ss_pred             HHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          284 VENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      +.++|.+||+.||++|+     ++.++++      +.++.+..|.....+...+++.
T Consensus       223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~------h~~~~~~~~~~~~~~~~~~~~~  273 (325)
T cd05594         223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQ------HKFFAGIVWQDVYEKKLVPPFK  273 (325)
T ss_pred             HHHHHHHHhhcCHHHhCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcC
Confidence            99999999999999997     7888775      6788888888766555555443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-41  Score=341.33  Aligned_cols=310  Identities=22%  Similarity=0.355  Sum_probs=245.6

Q ss_pred             cccccCCCccccccccC--CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC--chhhHH
Q 006772           16 YELFEGDPDHLRTVVAT--PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAK   91 (632)
Q Consensus        16 ~~~~~~~~~~~~~~~~~--~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~--~~~~~~   91 (632)
                      -|...++++....++..  ...++..+..++|.+++.||+|+|++|-+++++++.      +.+|+|++++.  +.+..-
T Consensus       221 he~~~~~~~~~~~a~~~m~g~~~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~------qiyamkvvkkel~nddedi  294 (593)
T KOG0695|consen  221 HESIKDDSEDLKPAIDGMDGIKISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTD------QIYAMKVVKKELVNDDEDI  294 (593)
T ss_pred             chhhhcCccchhhhhhhccccccccccccccceeeeeecCcchhhhhheehcccc------eeeehhhHHHHhcCCcccc
Confidence            34555566665544443  334556678899999999999999999999998876      48999999863  333333


Q ss_pred             HHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 006772           92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGL  170 (632)
Q Consensus        92 ~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~-~~~~~l~~~~~~~ia~qIa~gL~yLHs~~I  170 (632)
                      ...+.+...+.+..++|+++-++.+|+++..+|+|.||++|.  |++.+ ++.++++++.+++|..+|+.||.|||++||
T Consensus       295 dwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~gg--dlmfhmqrqrklpeeharfys~ei~lal~flh~rgi  372 (593)
T KOG0695|consen  295 DWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGI  372 (593)
T ss_pred             hhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCc--ceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCe
Confidence            455666677788889999999999999999999999999963  33322 234689999999999999999999999999


Q ss_pred             eeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh
Q 006772          171 LVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT  250 (632)
Q Consensus       171 vHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt  250 (632)
                      |+||||..|+|+|..|++||+|+|..+.....   ...++++||||+|.|||+++++   .|.+.+|||+||++++||+.
T Consensus       373 iyrdlkldnvlldaeghikltdygmcke~l~~---gd~tstfcgtpnyiapeilrge---eygfsvdwwalgvlmfemma  446 (593)
T KOG0695|consen  373 IYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP---GDTTSTFCGTPNYIAPEILRGE---EYGFSVDWWALGVLMFEMMA  446 (593)
T ss_pred             eeeeccccceEEccCCceeecccchhhcCCCC---CcccccccCCCcccchhhhccc---ccCceehHHHHHHHHHHHHc
Confidence            99999999999999999999999998864332   2345678999999999999976   68889999999999999999


Q ss_pred             CCCCCCC-------CCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh-hcccCCCCc
Q 006772          251 GIQPWFG-------KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ-NAVYNDGEW  322 (632)
Q Consensus       251 G~~PF~~-------~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~-~~~~~~~~w  322 (632)
                      |+.||.-       .+.++.+.+++. .....+|..++-.+..++...|.+||.+|....--. -|..++ ++||..++|
T Consensus       447 grspfdivgm~n~d~ntedylfqvil-ekqiriprslsvkas~vlkgflnkdp~erlgc~~~~-g~~dik~h~ffr~idw  524 (593)
T KOG0695|consen  447 GRSPFDIVGMDNPDMNTEDYLFQVIL-EKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQT-GFSDIKSHAFFRSIDW  524 (593)
T ss_pred             CCCCcceecCCCcccchhHHHHHHHh-hhcccccceeehhhHHHHHHhhcCCcHHhcCCCccc-chhhhhcchhhhhCCH
Confidence            9999972       223333333332 345567899999999999999999999997542111 223332 678999999


Q ss_pred             cccccccccCCCcCCCCCC
Q 006772          323 TGLGSRALTDTSSVKGYTA  341 (632)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~  341 (632)
                      +.++.+...+|+.|.....
T Consensus       525 d~leqk~v~ppf~p~i~~d  543 (593)
T KOG0695|consen  525 DLLEQKQVLPPFQPQITDD  543 (593)
T ss_pred             HHHhhcccCCCCCCccccc
Confidence            9999999999998875544

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.1e-39  Score=338.53  Aligned_cols=254  Identities=20%  Similarity=0.314  Sum_probs=201.4

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +.++|++.++||+|+||.||+|.+..++      +.||+|.+.............++..++..+ +|+||+.+++++..+
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   75 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTE------NLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTE   75 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCC------CEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCC
Confidence            3578999999999999999999987655      489999986533222122222333445554 789999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +..++||||+.|+|.+.+... +..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        76 ~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          76 RCLTLVFEYLDSDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             CeEEEEEeCCCcCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            999999999999988887643 3468999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP------  274 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p------  274 (632)
                      ..   ........||+.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+..+....+......+      
T Consensus       155 ~~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
T cd07871         155 VP---TKTYSNEVVTLWYRPPDVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP  229 (288)
T ss_pred             CC---CccccCceecccccChHHhcCC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhh
Confidence            21   1122335689999999998642  357889999999999999999999999887766554443211100      


Q ss_pred             -----------CC-----------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 -----------CI-----------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 -----------~~-----------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                 .+           ...+++++.+||.+||+.||.+|||++|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         230 GITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             ccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                       01           1346789999999999999999999999885

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=9.1e-40  Score=345.53  Aligned_cols=267  Identities=19%  Similarity=0.341  Sum_probs=213.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||+||+|.+..++      +.||||++++...  ........++..++. ..+|++|+.+++++..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~-~~~~~~i~~~~~~~~~~   73 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATG------DIYAMKVMKKSVLLAQETVSFFEEERDILS-ISNSPWIPQLQYAFQDK   73 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHH-hCCCCCCcceeeEEecC
Confidence            47999999999999999999987665      4899999975322  112223334434443 45899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++..+
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~  152 (330)
T cd05601          74 DNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARL  152 (330)
T ss_pred             CeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeEC
Confidence            99999999997 5777777553 357999999999999999999999999999999999999999999999999999765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCC---CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEV---RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .....  .......||+.|+|||++....   ...++.++|+|||||++|||++|..||...+..+.+..+........+
T Consensus       153 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~  230 (330)
T cd05601         153 TANKM--VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKF  230 (330)
T ss_pred             CCCCc--eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCC
Confidence            33211  1122347899999999986321   235788999999999999999999999988877777666544333334


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccc
Q 006772          277 P--SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       277 p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                      |  ..+++++.+|+.+||. ||.+||++.+++.      ++++...+|..+.
T Consensus       231 ~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~------h~~~~~~~~~~~~  275 (330)
T cd05601         231 PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC------HPFFSKIDWNNIR  275 (330)
T ss_pred             CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC------CCCcCCCCHHHHh
Confidence            4  3579999999999998 9999999998875      7788888887654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-39  Score=348.09  Aligned_cols=265  Identities=22%  Similarity=0.359  Sum_probs=210.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+...  .........+..++..+ +|+||+.+++++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~   73 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTG------HIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDE   73 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcC
Confidence            47999999999999999999987665      4899999964321  11122233344555554 699999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++.+
T Consensus        74 ~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          74 NYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CeEEEEECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence            99999999998 567776654  357999999999999999999999999999999999999999999999999998764


Q ss_pred             cCCCCCC-----------------------------------CccccccCCCccCCccccCCCCCCCCCcccccchhHHH
Q 006772          200 LGRSLSD-----------------------------------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS  244 (632)
Q Consensus       200 ~~~~~~~-----------------------------------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvv  244 (632)
                      .......                                   ......+||+.|||||++..   ..++.++|+|||||+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~i  228 (364)
T cd05599         152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ---TGYNKECDWWSLGVI  228 (364)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC---CCCCCeeeeecchhH
Confidence            3211000                                   01113469999999999864   368899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHhhhcCcCCCCC---HHHHHHHHHhhhhcccCC
Q 006772          245 IMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQNAVYND  319 (632)
Q Consensus       245 L~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~cL~~DP~~RPs---~~ell~~Le~~~~~~~~~  319 (632)
                      +|||++|..||.+.+..+....+........+|.  .+++++.++|.+|+. +|.+|++   +.+++.      ++++.+
T Consensus       229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~------h~~~~~  301 (364)
T cd05599         229 MYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS------HPFFKG  301 (364)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc------CCCcCC
Confidence            9999999999999888777766654333334443  578999999999996 9999998   888766      778888


Q ss_pred             CCccccc
Q 006772          320 GEWTGLG  326 (632)
Q Consensus       320 ~~w~~~~  326 (632)
                      .+|..+.
T Consensus       302 ~~~~~~~  308 (364)
T cd05599         302 VDWEHIR  308 (364)
T ss_pred             CCHHHHh
Confidence            8887644

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.4e-39  Score=343.18  Aligned_cols=269  Identities=24%  Similarity=0.384  Sum_probs=210.7

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      +.||+|+||.||+|++..++      +.||+|++.+...   .....+..+...+ .+..+|+||+.+++.+...+..|+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~-l~~~~h~~iv~~~~~~~~~~~~~l   73 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDG------SFYAVKVLQKKTILKKKEQNHIMAERNVL-LKNLKHPFLVGLHYSFQTAEKLYF   73 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHHHHhhHHHHHHHHHHHH-HHhCCCCCccceeeEEEcCCEEEE
Confidence            47999999999999987655      4899999865321   1122233333223 344579999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||++| +|.+.+..  ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--  149 (321)
T cd05603          74 VLDYVNGGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--  149 (321)
T ss_pred             EEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--
Confidence            9999985 66666543  357899999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV  284 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l  284 (632)
                       .......+||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+.+..+.  .....+|...+.++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~  223 (321)
T cd05603         150 -EETTSTFCGTPEYLAPEVLRK---EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL--HKPLQLPGGKTVAA  223 (321)
T ss_pred             -CCccccccCCcccCCHHHhcC---CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHH
Confidence             122234579999999999874   368889999999999999999999999988877777665  34456778899999


Q ss_pred             HHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          285 ENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       285 ~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++|.+||+.||.+||+...-  .++...+.++...+|..+..+...++..+
T Consensus       224 ~~li~~~l~~~p~~R~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (321)
T cd05603         224 CDLLVGLLHKDQRRRLGAKAD--FLEIKNHVFFSPINWDDLYHKRITPPYNP  273 (321)
T ss_pred             HHHHHHHccCCHhhcCCCCCC--HHHHhCCCCcCCCCHHHHhcCCCCCCcCC
Confidence            999999999999999976421  12223467788888887766655555433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1e-39  Score=337.28  Aligned_cols=252  Identities=19%  Similarity=0.300  Sum_probs=198.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhcc--CCCceeEeeEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFR--ESQSVCWLHGISV  118 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~--~h~~I~~l~~~~~  118 (632)
                      ++|++.+.||+|+||.||+|.+...+.     +.||+|.+......  ....+.++ ..++..+.  .||||+.+++++.
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e-~~~l~~l~~~~hpniv~~~~~~~   74 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVVRLFDVCT   74 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCC-----eEEEEEEEecccCCCCchHHHHHH-HHHHHhhcccCCCCcceEEEEEe
Confidence            479999999999999999999865432     57999998653221  11222232 23344432  6999999999875


Q ss_pred             E-----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          119 I-----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       119 ~-----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .     +..+++||||+.|+|.+++.......+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Df  154 (290)
T cd07862          75 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  154 (290)
T ss_pred             cccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence            3     45689999999999999887665567899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++.....    .......||+.|+|||++.+   ..++.++|+|||||++|||++|.+||.+.+..+....+......
T Consensus       155 g~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~  227 (290)
T cd07862         155 GLARIYSFQ----MALTSVVVTLWYRAPEVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  227 (290)
T ss_pred             cceEeccCC----cccccccccccccChHHHhC---CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence            999765322    12234568999999999864   36788999999999999999999999988766655555422110


Q ss_pred             C-------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 P-------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p-------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +                         .+...+++.+.+++.+||+.||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0                         011356788999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-40  Score=347.48  Aligned_cols=265  Identities=22%  Similarity=0.425  Sum_probs=212.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+....  ........+..++..+ +|+||+.+++++..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~   73 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTG------QVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDE   73 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCC------CEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecC
Confidence            47999999999999999999987655      48999998753211  1122233333444444 699999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||+. |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  151 (350)
T cd05573          74 EHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKM  151 (350)
T ss_pred             CeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccC
Confidence            99999999997 5787777654  58999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCC--------------------------CCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCC
Q 006772          200 LGRS--------------------------LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQ  253 (632)
Q Consensus       200 ~~~~--------------------------~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~  253 (632)
                      ....                          ..........||+.|+|||++.+.   .++.++|||||||++|||++|..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~  228 (350)
T cd05573         152 NKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT---PYGLECDWWSLGVILYEMLYGFP  228 (350)
T ss_pred             cccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC---CCCCceeeEecchhhhhhccCCC
Confidence            3321                          000112345789999999999754   68899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHhhhcCcCCCCC-HHHHHHHHHhhhhcccCCCCccccc
Q 006772          254 PWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNRPL-MADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       254 PF~~~~~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~cL~~DP~~RPs-~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                      ||...+..+.+..+........+|.  .+++++.++|.+||. ||.+||+ +.++++      ++++.+.+|....
T Consensus       229 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~------hp~~~~~~~~~~~  297 (350)
T cd05573         229 PFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS------HPFFKGIDWENLR  297 (350)
T ss_pred             CCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc------CCCcCCCCHHHHh
Confidence            9999887777776664223333343  469999999999997 9999999 999886      6788888887644

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.4e-39  Score=339.86  Aligned_cols=260  Identities=20%  Similarity=0.315  Sum_probs=200.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.++.++      +.||||++.............++..++..+ +|+||+.+++++..++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~   76 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNG------KLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKE   76 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCC------CEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCC
Confidence            478999999999999999999987655      489999987543222122222333444444 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..|+||||+.+++.+.+... .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          77 TLTLVFEYVHTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV  155 (303)
T ss_pred             eEEEEEECCCcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence            99999999999999888654 35789999999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhccCCC-----
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKEKPC-----  275 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~~p~-----  275 (632)
                      .   ........||+.|+|||++.+.  ..++.++|+|||||++|||++|..||.+... .+....+......+.     
T Consensus       156 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (303)
T cd07869         156 P---SHTYSNEVVTLWYRPPDVLLGS--TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP  230 (303)
T ss_pred             C---CccCCCCcccCCCCChHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence            1   1222345689999999998643  3578899999999999999999999987542 222222211100000     


Q ss_pred             ----------------CC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          276 ----------------IP---------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       276 ----------------~p---------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                                      .+         ...++++.+|+.+||+.||++|||+.++++      +++|.+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~------h~~f~~~  294 (303)
T cd07869         231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS------HEYFSDL  294 (303)
T ss_pred             chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc------CcccccC
Confidence                            00         124568899999999999999999999886      5666544

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-40  Score=359.80  Aligned_cols=248  Identities=23%  Similarity=0.352  Sum_probs=214.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      -|++++.||.|+-|.|-+|++..++      +.+|||++.+...... ...-.+.+.++.++..|||++.+++++..+.+
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TG------qlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~   86 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETG------QLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH   86 (786)
T ss_pred             ceeccccccCCCCceehhhhccccc------ceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence            3689999999999999999998777      4899999977532111 11112223445677899999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +|+|+||++ |.|++++.+  ++++++.++.+++.||+.|+.|+|..+|+||||||+|+|||..+++||+|||+|.+-..
T Consensus        87 lylvlEyv~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~  164 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP  164 (786)
T ss_pred             EEEEEEecCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence            999999998 789999876  47999999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      .    .-..+.||+|.|.|||++++..+  -..++||||.||+||.||||+.||.+++...++.++.  .....+|..+|
T Consensus       165 g----klLeTSCGSPHYA~PEIV~G~pY--dG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~--~G~f~MPs~Is  236 (786)
T KOG0588|consen  165 G----KLLETSCGSPHYAAPEIVSGRPY--DGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ--RGVFEMPSNIS  236 (786)
T ss_pred             C----ccccccCCCcccCCchhhcCCCC--CCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH--cCcccCCCcCC
Confidence            3    33456799999999999998743  2479999999999999999999999999998888876  56777899999


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++++||++||..||++|.+++||++
T Consensus       237 ~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  237 SEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             HHHHHHHHHHhccCccccccHHHHhh
Confidence            99999999999999999999999997

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.8e-39  Score=336.37  Aligned_cols=265  Identities=22%  Similarity=0.367  Sum_probs=203.2

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCC----------CcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCC
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSAD----------DFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQ  108 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~----------~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~  108 (632)
                      +..++|++.++||+|+||.||+|.+....+          .......||+|.+........ ..+.++ ..++.++ +|+
T Consensus         2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E-~~~l~~l-~h~   79 (304)
T cd05096           2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKE-VKILSRL-KDP   79 (304)
T ss_pred             CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHH-HHHHhhc-CCC
Confidence            456799999999999999999998754321          012334799999976433322 334333 3455555 789


Q ss_pred             ceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhc-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 006772          109 SVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR-----------------GGKLPLPDILRYGIQLAKGISDLHSIGL  170 (632)
Q Consensus       109 ~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~-----------------~~~l~~~~~~~ia~qIa~gL~yLHs~~I  170 (632)
                      ||+.+++++...+..|++|||+. |+|.+++....                 ...+++..++.++.||+.||.|||+++|
T Consensus        80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  159 (304)
T cd05096          80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF  159 (304)
T ss_pred             CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999999999999997 58888775431                 1246788999999999999999999999


Q ss_pred             eeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh
Q 006772          171 LVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT  250 (632)
Q Consensus       171 vHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt  250 (632)
                      +||||||+|||++.++.+||+|||+++....... ........++..|||||++..   +.++.++|+|||||++|||++
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~  235 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILM---GKFTTASDVWAFGVTLWEILM  235 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccceecccCce-eEecCcCCCCccccCHHHHhc---CCCCchhhhHHHHHHHHHHHH
Confidence            9999999999999999999999999876532211 011122345789999999863   468899999999999999987


Q ss_pred             --CCCCCCCCCHHHHHHHHHhh------ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          251 --GIQPWFGKSVEEIYHSVVIK------KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       251 --G~~PF~~~~~~ei~~~i~~~------~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                        +..||.+.+..+....+...      ......|..+|..+.++|.+||+.||++||++.+|.+.|+
T Consensus       236 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         236 LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             ccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence              67888887766554433211      1122345678999999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-39  Score=334.95  Aligned_cols=273  Identities=20%  Similarity=0.326  Sum_probs=214.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||+||++.+..++      +.||+|.+......  ........+..++..+ +|++|+.+++.+..++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   73 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKD   73 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCC------ceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCC
Confidence            4899999999999999999987654      48999998653211  1112122233455555 7899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+||||+. |+|.+.+.......+++..+..++.|++.||+|||+++|+||||||+|||+++++.++|+|||++....
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            9999999998 567666655444579999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hhccCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--IKKEKPCIPS  278 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~--~~~~~p~~p~  278 (632)
                      ..    .......|++.|||||++.+   ..++.++|+|||||++|||++|..||.+.+.......+.  .......++.
T Consensus       154 ~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd05605         154 EG----ETIRGRVGTVGYMAPEVVKN---ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSE  226 (285)
T ss_pred             CC----CccccccCCCCccCcHHhcC---CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCc
Confidence            21    11233578999999999864   368889999999999999999999998865533222221  1233445667


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .+++.+.+||.+||+.||++||     +++++++      +.++...+|..+..+...+++.|
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05605         227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA------HPFFRTANFKRLEAGMLEPPFCP  283 (285)
T ss_pred             ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc------CcCccCCCHHHHhhCCCCCCCCC
Confidence            8999999999999999999999     7777765      67888888988877766666544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.2e-39  Score=349.33  Aligned_cols=272  Identities=22%  Similarity=0.353  Sum_probs=213.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+...  ......+..+..++..+ +|++|+.+++.+..+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~   73 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTG------HIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDK   73 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcC
Confidence            47999999999999999999988665      4899999964321  11112223333444444 789999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++.+  .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.++|+|||+++..
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          74 RNLYLIMEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             CEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            99999999998 577777654  357999999999999999999999999999999999999999999999999998754


Q ss_pred             cCCCCC--------------------------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHH
Q 006772          200 LGRSLS--------------------------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME  247 (632)
Q Consensus       200 ~~~~~~--------------------------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~E  247 (632)
                      ......                                .......+||+.|||||++.+.   .++.++|+|||||++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvilye  228 (360)
T cd05627         152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYE  228 (360)
T ss_pred             ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC---CCCCcceeccccceeee
Confidence            221000                                0011235799999999998743   68889999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHhhhcCcCCCCC---HHHHHHHHHhhhhcccCCCCc
Q 006772          248 MLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNRPL---MADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       248 mltG~~PF~~~~~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~cL~~DP~~RPs---~~ell~~Le~~~~~~~~~~~w  322 (632)
                      |++|..||.+.+..+.+..+........+|.  .+++++.++|.+|+. ||.+|++   +.+++.      ++++.+.+|
T Consensus       229 l~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~------hp~f~~~~~  301 (360)
T cd05627         229 MLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS------HPFFEGVDW  301 (360)
T ss_pred             cccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc------CCCCCCCCH
Confidence            9999999999888887777664333344454  478999999999875 9999995   555554      889999999


Q ss_pred             cccccccccCC
Q 006772          323 TGLGSRALTDT  333 (632)
Q Consensus       323 ~~~~~~~~~~~  333 (632)
                      ..+..+....+
T Consensus       302 ~~~~~~~~~~~  312 (360)
T cd05627         302 GHIRERPAAIP  312 (360)
T ss_pred             HHHhcCCCCCC
Confidence            98776544443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=5.6e-39  Score=340.65  Aligned_cols=268  Identities=21%  Similarity=0.369  Sum_probs=209.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||++.+..++      +.||+|++.+...  ........++..++ ...+|++|+.+++++..+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~l~~~~~~~   73 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTE------RIYAMKILNKWEMLKRAETACFREERNVL-VNGDCQWITTLHYAFQDE   73 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEeHHHHHhhHHHHHHHHHHHHH-HhCCCCCEeeEEEEEEcC
Confidence            57999999999999999999987655      4899999864221  11112223333333 345799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..||||||+. |+|.+++... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~  152 (331)
T cd05624          74 NYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKM  152 (331)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeec
Confidence            99999999998 5777777543 357899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .....  ......+||+.|||||++.+..  .+.++.++|+|||||+||||++|+.||...+..+.+..+.....+..+|
T Consensus       153 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p  230 (331)
T cd05624         153 NQDGT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP  230 (331)
T ss_pred             cCCCc--eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCC
Confidence            33211  1112357999999999986421  1357889999999999999999999999988877777766544444444


Q ss_pred             C---CCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCccccc
Q 006772          278 S---GLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       278 ~---~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                      .   .++.++.+++.+||..++.+  |++++++++      +.++.+.+|+.+.
T Consensus       231 ~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~------h~~f~~~~~~~~~  278 (331)
T cd05624         231 SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK------HAFFEGIDWENIR  278 (331)
T ss_pred             CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc------CCCcCCCCHHHHh
Confidence            3   46899999999999866544  457777665      6788888888764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=4.1e-39  Score=351.47  Aligned_cols=293  Identities=21%  Similarity=0.304  Sum_probs=224.5

Q ss_pred             cCCCCCcccccccCCCccccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch
Q 006772            8 HKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE   87 (632)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~   87 (632)
                      ..++..-+|.+.+.        +.-|......++.++|++++.||+|+||.||+|.+..... ......||||++.+...
T Consensus        10 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~-~~~~~~vavK~l~~~~~   80 (400)
T cd05105          10 SISPDGHEYIYVDP--------MQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSR-SQPVMKVAVKMLKPTAR   80 (400)
T ss_pred             eeCCCCceeeeecc--------ccCCCCCceeccccceehhheecCCCCceEEEEEEcccCC-CCCceEEEEEecCCCCC
Confidence            33445556665533        3344445666788999999999999999999998754332 11234799999976443


Q ss_pred             hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhc------------------------
Q 006772           88 DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR------------------------  142 (632)
Q Consensus        88 ~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~------------------------  142 (632)
                      ....+.+..+..++..+..||||+.+++++...+.+||||||++ |+|.+++....                        
T Consensus        81 ~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
T cd05105          81 SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPAD  160 (400)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCccc
Confidence            33333333344566777679999999999999999999999998 68877765421                        


Q ss_pred             ----------------------------------------------------------------------CCCCCHHHHH
Q 006772          143 ----------------------------------------------------------------------GGKLPLPDIL  152 (632)
Q Consensus       143 ----------------------------------------------------------------------~~~l~~~~~~  152 (632)
                                                                                            ...+++.+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~  240 (400)
T cd05105         161 ESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLL  240 (400)
T ss_pred             ccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence                                                                                  1247888899


Q ss_pred             HHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCC
Q 006772          153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPI  232 (632)
Q Consensus       153 ~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~  232 (632)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ .......++..|||||++.+   ..+
T Consensus       241 ~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~  316 (400)
T cd05105         241 SFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFD---NLY  316 (400)
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcC---CCC
Confidence            99999999999999999999999999999999999999999999765332111 11223356788999999864   367


Q ss_pred             CcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          233 SFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       233 t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +.++|||||||++|||++ |..||..................+..+..++.++.+++.+||+.||++||++.+|.+.|+.
T Consensus       317 ~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~  396 (400)
T cd05105         317 TTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES  396 (400)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence            899999999999999997 9999988654443333333444556678899999999999999999999999999998876


Q ss_pred             hh
Q 006772          312 SQ  313 (632)
Q Consensus       312 ~~  313 (632)
                      +.
T Consensus       397 l~  398 (400)
T cd05105         397 LL  398 (400)
T ss_pred             Hc
Confidence            53

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.1e-38  Score=344.44  Aligned_cols=268  Identities=22%  Similarity=0.400  Sum_probs=209.2

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||+|++.+...  ........++..++ +..+||||+.+++
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~e~~i~-~~~~hp~iv~~~~  110 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR------KVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFY  110 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCC------cEEEEEEEEHHHhhhhHHHHHHHHHHHHH-HhCCCCCCCeEEE
Confidence            3456689999999999999999999988765      4899999864221  11122233333333 3458999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      .+..++.+|+||||++ |+|.+++..   ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG  187 (371)
T cd05622         111 AFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG  187 (371)
T ss_pred             EEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCC
Confidence            9999999999999998 567766643   368999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCC-CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++.......  ......+||+.|||||++.... .+.++.++|+|||||++|||++|..||.+.+....+..+......
T Consensus       188 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~  265 (371)
T cd05622         188 TCMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS  265 (371)
T ss_pred             ceeEcCcCCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc
Confidence            9986533211  1223457999999999987532 224788999999999999999999999998888777777654444


Q ss_pred             CCCC--CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          274 PCIP--SGLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       274 p~~p--~~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      ..+|  ..++.++.++|.+||..++.+  |+++.++++      +.++.+..|.
T Consensus       266 ~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~------h~~~~~~~~~  313 (371)
T cd05622         266 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR------HLFFKNDQWA  313 (371)
T ss_pred             ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc------CcccCCCChh
Confidence            4444  368999999999999844433  678888886      5566555443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=3.3e-39  Score=331.97  Aligned_cols=265  Identities=22%  Similarity=0.382  Sum_probs=212.2

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.+.||+|+||.||+|.+...+. ......||+|.+...........+.++...+..+ +|+||+.+++++..
T Consensus         2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~   79 (283)
T cd05048           2 IPLSAVRFLEELGEGAFGKVYKGELTGPNE-RLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTK   79 (283)
T ss_pred             CChHHcchhhcccCccCCcEEEEEEecCCC-CcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcC
Confidence            456789999999999999999998765442 1233579999987544333232233333444444 78999999999998


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRG--------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE  184 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~--------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~  184 (632)
                      .+..|++|||++ |+|.+++.....              ..+++..++.++.|++.||.|||+++++||||||+|||+++
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            899999999998 688888765321              46889999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHH
Q 006772          185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI  263 (632)
Q Consensus       185 ~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei  263 (632)
                      ++.++|+|||+++........ .......+++.|+|||.+..   +.++.++|+|||||++|||++ |..||.+.+..++
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~  235 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADYY-RVQSKSLLPVRWMPPEAILY---GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV  235 (283)
T ss_pred             CCcEEECCCcceeeccccccc-cccCCCcccccccCHHHhcc---CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            999999999998764322111 11223456889999999863   468899999999999999998 9999999888877


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ...+.. ...+..|..+|+++.+|+.+||+.||.+||++.+|++.|+.
T Consensus       236 ~~~i~~-~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         236 IEMIRS-RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHc-CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            766553 34455678899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-40  Score=356.54  Aligned_cols=248  Identities=21%  Similarity=0.387  Sum_probs=208.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|....+||+|..|.||.|....++      ..||||.+........+-.+++. .++ +-.+|+||+.++..+...+.
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~------~~VaiK~m~l~~Q~~keLilnEi-~Vm-~~~~H~NiVnfl~Sylv~de  344 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTK------QEVAIKRMDLRKQPKKELLLNEI-LVM-RDLHHPNIVNFLDSYLVGDE  344 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCC------ceEEEEEEEeccCCchhhhHHHH-HHH-HhccchHHHHHHHHhcccce
Confidence            56888999999999999999988766      48999999765544434444443 333 34589999999988888899


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +++|||||+ |+|.|.+..   ..+++.++..++++++.||+|||.++|+|||||.+|||++.+|.+||+|||++..+..
T Consensus       345 LWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~  421 (550)
T KOG0578|consen  345 LWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE  421 (550)
T ss_pred             eEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence            999999999 577776654   3699999999999999999999999999999999999999999999999999887654


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p~~p~~l  280 (632)
                      ..   ....+.+|||+|||||++..   ..|.+++||||||+|++||+.|++||...++......|...+ .+...+..+
T Consensus       422 ~~---~KR~TmVGTPYWMAPEVvtr---k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~kl  495 (550)
T KOG0578|consen  422 EQ---SKRSTMVGTPYWMAPEVVTR---KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKL  495 (550)
T ss_pred             cc---CccccccCCCCccchhhhhh---cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCcccc
Confidence            32   23456789999999999974   478899999999999999999999999888776665555332 333466889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++++++|+.+||+.|+++|+++.|||+
T Consensus       496 S~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  496 SPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             CHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            999999999999999999999999997

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-40  Score=345.59  Aligned_cols=264  Identities=20%  Similarity=0.348  Sum_probs=206.7

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhc--cCCCceeEeeEEEEECCEEEE
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKF--RESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l--~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      ||+|+||+||+|.+..++      +.||||++.+....   .......+. .++...  .+||+|+.++..+..++.+|+
T Consensus         1 lG~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~e~-~~l~~~~~~~~p~i~~~~~~~~~~~~~~l   73 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTR------RIYAMKVLSKKEIVAKKEVAHTIGER-NILVRTLLDESPFIVGLKFSFQTDSDLYL   73 (330)
T ss_pred             CCCCCceEEEEEEECCCC------CEEEEEEEeHHHHhhhhHHHHHHHHH-HHHHHhccCCCCcCcceEEEEecCCeEEE
Confidence            799999999999987665      48999998642211   111222222 233333  379999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||+. |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--  149 (330)
T cd05586          74 VTDYMSGGELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--  149 (330)
T ss_pred             EEcCCCCChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC--
Confidence            999998 577766653  357999999999999999999999999999999999999999999999999998753221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC-CCCCHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP-SGLPPA  283 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p-~~lp~~  283 (632)
                       .......+||+.|||||++.+.  ..++.++|+|||||++|||++|..||.+.+..+++..+...  ...+| ..++++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~  224 (330)
T cd05586         150 -NKTTNTFCGTTEYLAPEVLLDE--KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--KVRFPKNVLSDE  224 (330)
T ss_pred             -CCCccCccCCccccCHHHHcCC--CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--CCCCCCccCCHH
Confidence             1122345799999999998643  24788999999999999999999999998888777666533  23334 357999


Q ss_pred             HHHHHHHhhhcCcCCCCC----HHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          284 VENVIIGCFEYDLRNRPL----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      +.++|.+||+.||.+||+    +.++++      ++++.+.+|..+..+.+.++..+
T Consensus       225 ~~~li~~~L~~~P~~R~~~~~~~~~ll~------h~~~~~~~~~~~~~~~~~~~~~~  275 (330)
T cd05586         225 GRQFVKGLLNRNPQHRLGAHRDAVELKE------HPFFADIDWDLLSKKQITPPFKP  275 (330)
T ss_pred             HHHHHHHHcCCCHHHCCCCCCCHHHHhc------CccccCCCHHHHHhCCCCCCccC
Confidence            999999999999999995    555443      77888888888776666665544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4.8e-39  Score=346.55  Aligned_cols=265  Identities=20%  Similarity=0.277  Sum_probs=206.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+...  .........+..++..+ .|++|+.+++.+..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~   73 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTN------ALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDK   73 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCC------CEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Confidence            47999999999999999999987665      4899999864321  11112223333455554 789999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++..+
T Consensus        74 ~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          74 DNLYFVMDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             CEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            99999999998 578777754  357899999999999999999999999999999999999999999999999997532


Q ss_pred             cCCC----------------------------------------CCCCccccccCCCccCCccccCCCCCCCCCcccccc
Q 006772          200 LGRS----------------------------------------LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTW  239 (632)
Q Consensus       200 ~~~~----------------------------------------~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvw  239 (632)
                      ....                                        .........+||+.|||||++.+.   .++.++|||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Diw  228 (376)
T cd05598         152 RWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWW  228 (376)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC---CCCcceeee
Confidence            1000                                        000011235799999999999743   678899999


Q ss_pred             hhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCC---CHHHHHHHHHhhhh
Q 006772          240 GFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQN  314 (632)
Q Consensus       240 SlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RP---s~~ell~~Le~~~~  314 (632)
                      ||||++|||++|+.||.+.+..+....+........+|  ..+++++.++|.+|+ .+|.+|+   ++.++++      +
T Consensus       229 SlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~------h  301 (376)
T cd05598         229 SVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA------H  301 (376)
T ss_pred             eccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC------C
Confidence            99999999999999999988776655554333333333  368999999999977 5999999   8888876      6


Q ss_pred             cccCCCCccccc
Q 006772          315 AVYNDGEWTGLG  326 (632)
Q Consensus       315 ~~~~~~~w~~~~  326 (632)
                      +++...+|....
T Consensus       302 ~~~~~~~~~~~~  313 (376)
T cd05598         302 PFFKGIDFASLI  313 (376)
T ss_pred             CCcCCCCHHHHh
Confidence            777777776654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.1e-40  Score=348.56  Aligned_cols=258  Identities=21%  Similarity=0.360  Sum_probs=212.0

Q ss_pred             CCcCC--CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDP--TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~--~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      .|...  +.|+.+++||+|+||.||+|++..++      +.||+|++..... .....+..++..++.++ +||||+.|.
T Consensus       110 ~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tg------kivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~  182 (560)
T KOG0600|consen  110 GWGPRRADSFEKIEKIGEGTYGQVYKARDLETG------KIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLE  182 (560)
T ss_pred             cccccchHHHHHHHHhcCcchhheeEeeecccC------cEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCccccee
Confidence            45444  77999999999999999999998776      4899999976542 23334444444555554 799999999


Q ss_pred             EEEEEC--CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          115 GISVIN--GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       115 ~~~~~~--~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++-+..  +.+|||+|||+.+|..++.. .+-.|++.++.-|+.||+.||+|||++||+|||||.+|||||.+|.+||+|
T Consensus       183 eivt~~~~~siYlVFeYMdhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaD  261 (560)
T KOG0600|consen  183 EIVTSKLSGSIYLVFEYMDHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIAD  261 (560)
T ss_pred             eEEEecCCceEEEEEecccchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecc
Confidence            988775  79999999999988877753 356899999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||||+++....  ...++..+-|.+|.|||++.+..  .|+.++|+||.||+|.||++|++.|.|.+..+.++.|.....
T Consensus       262 FGLAr~y~~~~--~~~~T~rVvTLWYRpPELLLG~t--~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG  337 (560)
T KOG0600|consen  262 FGLARFYTPSG--SAPYTSRVVTLWYRPPELLLGAT--SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG  337 (560)
T ss_pred             ccceeeccCCC--CcccccceEEeeccChHHhcCCc--ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC
Confidence            99999875542  22356667799999999999874  689999999999999999999999999987776666653221


Q ss_pred             CCC--------CC-------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPC--------IP-------------------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~--------~p-------------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .|.        +|                   ..+|+...+|+..+|..||.+|.|+.+.|+
T Consensus       338 SP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  338 SPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             CCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            111        11                   246778899999999999999999998775

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3.2e-39  Score=333.14  Aligned_cols=251  Identities=20%  Similarity=0.304  Sum_probs=197.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|+++.++      +.||+|++.....  .....+.+ +..++..+ +|+||+.+++++..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~~~~   72 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETK------EIVAIKKFKDSEENEEVKETTLR-ELKMLRTL-KQENIVELKEAFRRR   72 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCC------cEEEEEEEecccccccchhhHHH-HHHHHHhC-CCccccchhhhEecC
Confidence            47999999999999999999987665      4899999875322  11222233 33444444 789999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +.+|+||||+++++++.+... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        73 ~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~  151 (287)
T cd07848          73 GKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLS  151 (287)
T ss_pred             CEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence            999999999998888776543 3579999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc--------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE--------  272 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~--------  272 (632)
                      ...  ........||+.|+|||++.+.   .++.++|+|||||++|||++|+.||.+.+..+....+.....        
T Consensus       152 ~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (287)
T cd07848         152 EGS--NANYTEYVATRWYRSPELLLGA---PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMK  226 (287)
T ss_pred             ccc--cccccccccccccCCcHHHcCC---CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHH
Confidence            221  1122345789999999998743   578899999999999999999999998765443322211000        


Q ss_pred             ------------CC----------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 ------------KP----------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ------------~p----------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                  .+          .....+|.++.+||.+||+.||++||+++++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         227 LFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                        00          011237888999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4.7e-39  Score=333.90  Aligned_cols=256  Identities=15%  Similarity=0.249  Sum_probs=209.2

Q ss_pred             cCCCCeEEE--eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           40 IDPTSLKLK--HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        40 I~~~~y~l~--~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      |+.++++..  ..||+|++|.||+|.+..        +.||||++.......  ......++..++.++ +||||+.+++
T Consensus        15 i~~~~i~~~~~~~i~~g~~~~v~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g   85 (283)
T PHA02988         15 IESDDIDKYTSVLIKENDQNSIYKGIFNN--------KEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYG   85 (283)
T ss_pred             cCHHHcCCCCCeEEeeCCceEEEEEEECC--------EEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEee
Confidence            556666666  689999999999998732        489999997643322  112223333455555 6889999999


Q ss_pred             EEEE----CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEE
Q 006772          116 ISVI----NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       116 ~~~~----~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vk  189 (632)
                      ++.+    ...+++||||++ |+|.+++..  .+.+++...+.++.|++.||.|||+. +++||||||+|||+++++.+|
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~k  163 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLK  163 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEE
Confidence            9876    357899999999 577777754  35789999999999999999999984 999999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 006772          190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~  269 (632)
                      |+|||+++.....      .....||..|+|||++.+. ...++.++|||||||++|||++|..||.+.+..+++..+..
T Consensus       164 l~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~  236 (283)
T PHA02988        164 IICHGLEKILSSP------PFKNVNFMVYFSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN  236 (283)
T ss_pred             EcccchHhhhccc------cccccCcccccCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            9999998754321      1234689999999998642 24689999999999999999999999999888888877766


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ...++.+|..+|+++.+++.+||+.||++||++.|+++.|+.++
T Consensus       237 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            66677777789999999999999999999999999999998765

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.1e-38  Score=330.32  Aligned_cols=277  Identities=18%  Similarity=0.335  Sum_probs=218.0

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +++.++|++.+.||+|+||.||+|.++..... .....||+|.+..............+...+..+ +|+||+++++++.
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   79 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKG-EAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVS   79 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCC-CcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEc
Confidence            46789999999999999999999987642211 123579999886543222222222233344444 6899999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEE
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQR--------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~--------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vk  189 (632)
                      .++..|+||||+. |+|.+++....        ...+++..++.++.|++.||.|||+++|+||||||+|||++.++.++
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence            8899999999998 68888886532        12356778899999999999999999999999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 006772          190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV  268 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~  268 (632)
                      |+|||+++........ .......++..|+|||.+.+   +.++.++|+|||||++|||++ |..||.+.+..+....+.
T Consensus       160 L~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~---~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  235 (288)
T cd05061         160 IGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM  235 (288)
T ss_pred             ECcCCccccccccccc-cccCCCcccccccCHHHhcc---CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            9999998765332211 11122345778999999863   467889999999999999998 899999888777665554


Q ss_pred             hhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       269 ~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                       ....+..+..+++.+.+++.+||+.||++||++.++++.|+...++.|.+.+|
T Consensus       236 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         236 -DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             -cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence             33445567788999999999999999999999999999999999998988877

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.9e-39  Score=340.19  Aligned_cols=253  Identities=20%  Similarity=0.294  Sum_probs=193.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      +|++.+.||+|+||.||+|.+..++      ..||||.+.....  .....+.++ ..++..+ +|+||+.+++++... 
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E-~~~l~~l-~hpniv~~~~~~~~~~   72 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTG------EKVAIKKINDVFEHVSDATRILRE-IKLLRLL-RHPDIVEIKHIMLPPS   72 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCC------CEEEEEEechhhccchhHHHHHHH-HHHHHhC-CCCCEeeecceEeccC
Confidence            5899999999999999999987665      4899999864221  122223333 3444444 799999999887543 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          121 ----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       121 ----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                          ..+|+||||+.++|.+.+...  ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~  150 (338)
T cd07859          73 RREFKDIYVVFELMESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLA  150 (338)
T ss_pred             CCCCceEEEEEecCCCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccc
Confidence                358999999999998887543  47999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh------
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK------  270 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~------  270 (632)
                      +................||+.|+|||++.+. ...++.++|||||||++|||++|+.||.+.+.......+...      
T Consensus       151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  229 (338)
T cd07859         151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP  229 (338)
T ss_pred             cccccccCccccccCCCCCCCcCCHHHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            7643222111122345789999999998642 246788999999999999999999999876643322111100      


Q ss_pred             --------------------ccCCCC---CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 --------------------KEKPCI---PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 --------------------~~~p~~---p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          .....+   -..+++++.++|.+||+.||++||++.|+++
T Consensus       230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                                000000   1346788999999999999999999999886

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.1e-39  Score=347.30  Aligned_cols=264  Identities=21%  Similarity=0.297  Sum_probs=206.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++++.||+|+||.||+|.+..++      +.||||++.+...  .........+..++..+ +|++|+.+++.+..+
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~   73 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTK------ALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDK   73 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCC------CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeC
Confidence            36999999999999999999987665      4899999865321  11122233333445544 789999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+||||||++ |+|.+++.+.  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          74 DNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            99999999998 5777777543  57899999999999999999999999999999999999999999999999997532


Q ss_pred             cCCC--------------------------------------------CCCCccccccCCCccCCccccCCCCCCCCCcc
Q 006772          200 LGRS--------------------------------------------LSDSDMALRLGTPNYMAPEQWEPEVRGPISFE  235 (632)
Q Consensus       200 ~~~~--------------------------------------------~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~k  235 (632)
                      ....                                            .........+||+.|||||++.+.   .++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~  228 (382)
T cd05625         152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQL  228 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC---CCCCe
Confidence            1000                                            000001234799999999999743   68899


Q ss_pred             cccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHHHHHHHH
Q 006772          236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPL---MADILHAFE  310 (632)
Q Consensus       236 sDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs---~~ell~~Le  310 (632)
                      +|||||||+||||++|+.||.+.+..+....+........+|  ..+++++.++|.+|+ .||.+|++   +.++++   
T Consensus       229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~---  304 (382)
T cd05625         229 CDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA---  304 (382)
T ss_pred             eeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc---
Confidence            999999999999999999999988777666655433333344  467999999999987 59999997   777665   


Q ss_pred             hhhhcccCCCCcccc
Q 006772          311 SSQNAVYNDGEWTGL  325 (632)
Q Consensus       311 ~~~~~~~~~~~w~~~  325 (632)
                         ++++...+|...
T Consensus       305 ---hp~f~~~~~~~~  316 (382)
T cd05625         305 ---HPFFKTIDFSSD  316 (382)
T ss_pred             ---CCCcCCcChHHH
Confidence               677877777653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=7.1e-39  Score=349.71  Aligned_cols=295  Identities=21%  Similarity=0.312  Sum_probs=230.5

Q ss_pred             hcccCCCCCcccccccCCCccccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecC
Q 006772            5 IRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP   84 (632)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~   84 (632)
                      +....+.+..+|+..  ||+      ..+......|+.++|.+.+.||+|+||.||+|.++.... ......||+|+++.
T Consensus         7 ~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~-~~~~~~vavK~l~~   77 (401)
T cd05107           7 VIESVSSDGHEYIYV--DPM------QLPYDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSH-SQSTMKVAVKMLKS   77 (401)
T ss_pred             EeeeeccCCceEEEE--CCC------CCCCCCcceecHHHeehhhhccCCCceeEEEEEEcCCCC-CCCceEEEEEecCC
Confidence            344667777888887  443      345555677888999999999999999999999764321 12335899999976


Q ss_pred             CchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcC--------------------
Q 006772           85 LKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG--------------------  143 (632)
Q Consensus        85 ~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~--------------------  143 (632)
                      .........+..+..++..+..|+||+.+++.+..++.+|+||||+. |+|.+++.+...                    
T Consensus        78 ~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  157 (401)
T cd05107          78 TARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGG  157 (401)
T ss_pred             CCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccc
Confidence            43332222233444566777669999999999999999999999998 688888764311                    


Q ss_pred             ----------------------------------------------------------------------------CCCC
Q 006772          144 ----------------------------------------------------------------------------GKLP  147 (632)
Q Consensus       144 ----------------------------------------------------------------------------~~l~  147 (632)
                                                                                                  ..++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  237 (401)
T cd05107         158 STPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALS  237 (401)
T ss_pred             cccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCC
Confidence                                                                                        2467


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCC
Q 006772          148 LPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE  227 (632)
Q Consensus       148 ~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  227 (632)
                      +..++.++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++........ .......++..|||||++.. 
T Consensus       238 ~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-  315 (401)
T cd05107         238 YMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFN-  315 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcC-
Confidence            7888999999999999999999999999999999999999999999999865322111 11122356889999999864 


Q ss_pred             CCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          228 VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       228 ~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                        ..++.++|+|||||++|||++ |..||......+..........++..|..++.++.+++.+||..||.+||++.+|+
T Consensus       316 --~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell  393 (401)
T cd05107         316 --NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV  393 (401)
T ss_pred             --CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence              357889999999999999998 89999876655554444444555667788999999999999999999999999999


Q ss_pred             HHHHhh
Q 006772          307 HAFESS  312 (632)
Q Consensus       307 ~~Le~~  312 (632)
                      +.|+.+
T Consensus       394 ~~L~~~  399 (401)
T cd05107         394 HLVGDL  399 (401)
T ss_pred             HHHHHH
Confidence            998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.1e-38  Score=336.21  Aligned_cols=268  Identities=21%  Similarity=0.384  Sum_probs=211.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||++.++.++      +.||+|++.+...  ......+.++..++. ..+|++|+.+++.+..+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~-~~~~~~i~~~~~~~~~~   73 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNAD------KVFAMKILNKWEMLKRAETACFREERDVLV-NGDNQWITTLHYAFQDE   73 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCC------CEEEEEEEeHHHHHHhhHHHHHHHHHHHHh-hCCCCCEeeEEEEEecC
Confidence            47999999999999999999987655      4899999864221  111222233333333 35789999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||+. |+|.+++.+. ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~  152 (332)
T cd05623          74 NNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL  152 (332)
T ss_pred             CEEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheec
Confidence            99999999997 6788777653 357899999999999999999999999999999999999999999999999998754


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....  .......+||+.|||||++...  ..+.++.++|+|||||++|||++|+.||.+.+..+.+..+.....+..+|
T Consensus       153 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p  230 (332)
T cd05623         153 MEDG--TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP  230 (332)
T ss_pred             ccCC--cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCC
Confidence            3221  1112335799999999998632  12357889999999999999999999999988888877776544443344


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCccccc
Q 006772          278 ---SGLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       278 ---~~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                         ..+++++.+|+.+||..++.+  |+++.++++      ++++.+.+|+.+.
T Consensus       231 ~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~------h~~f~~~~~~~~~  278 (332)
T cd05623         231 AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ------HPFFTGIDWDNIR  278 (332)
T ss_pred             CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC------CCCcCCCCHHHHh
Confidence               467999999999999765544  678888776      7788888888765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=5.4e-39  Score=331.95  Aligned_cols=264  Identities=21%  Similarity=0.344  Sum_probs=204.3

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHH--HHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK--VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      ||+|+||+||++.+..++      +.||+|.+.+.......  .....+..++..+ +|++|+.+.+++..++.+|+|||
T Consensus         1 lg~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e   73 (280)
T cd05608           1 LGKGGFGEVSACQMRATG------KLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMT   73 (280)
T ss_pred             CCCCCceeEEEEEEccCC------cEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEe
Confidence            799999999999987665      48999998653222111  1112233444444 89999999999999999999999


Q ss_pred             cCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          129 FYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       129 y~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |++ |+|.+.+...  ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||++.......  
T Consensus        74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--  151 (280)
T cd05608          74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--  151 (280)
T ss_pred             CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--
Confidence            998 4666555432  23578999999999999999999999999999999999999999999999999987653221  


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhhccCCCCCCCCC
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~~~~~p~~p~~lp  281 (632)
                       .......||+.|+|||++.+   ..++.++|+|||||++|||++|+.||.....    .+....+.  .....++..++
T Consensus       152 -~~~~~~~g~~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  225 (280)
T cd05608         152 -SKTKGYAGTPGFMAPELLQG---EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL--NDSVTYPDKFS  225 (280)
T ss_pred             -ccccccCCCcCccCHHHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc--ccCCCCcccCC
Confidence             11233578999999999974   3678899999999999999999999986542    22222222  23345667899


Q ss_pred             HHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          282 PAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      +++.+++.+||+.||++||     +++++++      ++++++..|..+......+|+.
T Consensus       226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~  278 (280)
T cd05608         226 PASKSFCEALLAKDPEKRLGFRDGNCDGLRT------HPLFRDLNWRQLEAGMLPPPFV  278 (280)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc------ChhhhcCCHhHHhhccCCCCCC
Confidence            9999999999999999999     5566665      6788888888877666665544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.7e-38  Score=328.79  Aligned_cols=273  Identities=20%  Similarity=0.307  Sum_probs=216.3

Q ss_pred             CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           35 QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        35 ~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      .....++.++|++.+.||+|+||.||+|.+..... ......+|+|.+..............+..++..+.+|+||+.++
T Consensus         4 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~-~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~   82 (293)
T cd05053           4 DPEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDN-PNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL   82 (293)
T ss_pred             CcccccCHhHeEEeeEecccccccEEEEEEecCCC-CCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            33556788999999999999999999999865432 12335899999875433222222233335566666899999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCe
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQ--------------RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN  179 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~--------------~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~N  179 (632)
                      +++..++.++++|||+. |+|.+++...              ....+++..++.++.|++.||+|||+++|+||||||+|
T Consensus        83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N  162 (293)
T cd05053          83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN  162 (293)
T ss_pred             EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence            99999999999999997 6888777542              23578999999999999999999999999999999999


Q ss_pred             EEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCC
Q 006772          180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGK  258 (632)
Q Consensus       180 ILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~  258 (632)
                      ||+++++.+||+|||+++.+...... .......++..|+|||++.+   ..++.++|+|||||++|||++ |..||.+.
T Consensus       163 il~~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~  238 (293)
T cd05053         163 VLVTEDHVMKIADFGLARDIHHIDYY-RKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLLWEIFTLGGSPYPGI  238 (293)
T ss_pred             EEEcCCCeEEeCccccccccccccce-eccCCCCCCccccCHHHhcc---CCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence            99999999999999998865332111 11112234678999999864   357889999999999999998 99999988


Q ss_pred             CHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +..+.+..+. ....+..+..++.++.+|+.+||..||++|||+.++++.|+.+.
T Consensus       239 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         239 PVEELFKLLK-EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            8777766554 34455667888999999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-40  Score=347.27  Aligned_cols=277  Identities=19%  Similarity=0.338  Sum_probs=225.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ++.+.|+.-+.||+||||+||-+..+.++      +.||+|.+.+..  ....+...-.+.++++++ +.++|+.+-..|
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTG------KMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAf  254 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATG------KMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAF  254 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecch------hhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeee
Confidence            56688999999999999999999888766      489999885432  112222222333455554 567999999999


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+.+.+|+||..|+| +|.-++.+..+..|++..+++|+++|+.||++||..+||+|||||+|||||+.|++.|+|+|+|
T Consensus       255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLA  334 (591)
T KOG0986|consen  255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLA  334 (591)
T ss_pred             cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceE
Confidence            999999999999996 4444444444468999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhhcc
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVIKKE  272 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~~~~  272 (632)
                      ..+...    ......+||.+|||||++..+   .|+...|||||||+||||+.|+.||.....    +++-+++.  ..
T Consensus       335 vei~~g----~~~~~rvGT~GYMAPEvl~ne---~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~--~~  405 (591)
T KOG0986|consen  335 VEIPEG----KPIRGRVGTVGYMAPEVLQNE---VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL--ED  405 (591)
T ss_pred             EecCCC----CccccccCcccccCHHHHcCC---cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh--cc
Confidence            866432    233456899999999999855   599999999999999999999999986432    34444443  34


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHH-----HHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMA-----DILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~-----ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      ...+++..++++++|.+.+|++||++|....     ++.+      +++|.+.+|..++...++||+.|..
T Consensus       406 ~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~------HpfFk~lnw~rleagml~PPfiPdp  470 (591)
T KOG0986|consen  406 PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE------HPFFKDLNWRRLEAGMLEPPFIPDP  470 (591)
T ss_pred             hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh------CcccccCCHhHHhccCCCCCCCCCc
Confidence            5557899999999999999999999998654     4444      8899999999999999999988753

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-38  Score=335.62  Aligned_cols=269  Identities=22%  Similarity=0.401  Sum_probs=209.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++.+...  ......+.++..++.. .+|++|+.+++++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~   73 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTG------QVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITNLHYAFQDE   73 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCCCceEEEEecC
Confidence            57999999999999999999987665      4899999864211  1111222333334433 4899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+|+||||+. |+|.+++.+. ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  152 (331)
T cd05597          74 NNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRL  152 (331)
T ss_pred             CeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeec
Confidence            99999999997 5777777542 457999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .....  .......||+.|||||++....  .+.++.++|+|||||++|||++|+.||.+.+..+.+..+........++
T Consensus       153 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  230 (331)
T cd05597         153 LADGT--VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP  230 (331)
T ss_pred             CCCCC--ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC
Confidence            33211  1112346899999999986321  2357889999999999999999999999988877777766443333333


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCcccccc
Q 006772          278 ---SGLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLGS  327 (632)
Q Consensus       278 ---~~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~~  327 (632)
                         ..+++++.++|++||..++++  |+++.++++      ++++.+.+|..+..
T Consensus       231 ~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~------hp~~~~~~~~~~~~  279 (331)
T cd05597         231 PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD------HPFFEGIDWDNIRN  279 (331)
T ss_pred             CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc------CCCCCCCCHHHHhh
Confidence               357999999999988654433  778888887      77888888877653

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-39  Score=342.31  Aligned_cols=256  Identities=23%  Similarity=0.347  Sum_probs=205.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---------hHH----HHHHHHHHHhhhccC
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---------CAK----VFVNKFEELFPKFRE  106 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---------~~~----~~~~~~~~il~~l~~  106 (632)
                      ...++|++++.||+|.||.|-||++..++      +.||||++.+....         ...    +..+++..+++++ +
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~------~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~  166 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDG------KLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-H  166 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCC------cEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-C
Confidence            45679999999999999999999987655      48999999763211         011    2344555666776 6


Q ss_pred             CCceeEeeEEEEE--CCEEEEEEecCC-CCHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          107 SQSVCWLHGISVI--NGKICIAMKFYE-GSVGDRIAQQRGGK-LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       107 h~~I~~l~~~~~~--~~~l~LVmEy~~-GsL~d~l~~~~~~~-l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      |+||++|..+..+  .+.+|||+|||. |.+..   --..++ +++.++++|+++++.||+|||.+|||||||||+|+||
T Consensus       167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w---~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl  243 (576)
T KOG0585|consen  167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW---CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL  243 (576)
T ss_pred             CcCeeEEEEeecCcccCceEEEEEeccCCcccc---CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE
Confidence            7999999998765  478999999998 43221   122345 8999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCC--CccccccCCCccCCccccCCCC-CCCCCcccccchhHHHHHHHHhCCCCCCCCC
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSD--SDMALRLGTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKS  259 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~-~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~  259 (632)
                      +++|++||+|||.+..........  .......|||.|||||.+.+.. ....+++.||||+||+||-|+.|+.||.+..
T Consensus       244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~  323 (576)
T KOG0585|consen  244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF  323 (576)
T ss_pred             cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence            999999999999987653322111  1223458999999999998643 2223688999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCC--CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          260 VEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~--~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+++.+|+.  .+..+|.  .+.+++++||.+||++||++|.+..+|..
T Consensus       324 ~~~l~~KIvn--~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  324 ELELFDKIVN--DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             HHHHHHHHhc--CcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence            9999999884  4444554  58999999999999999999999998875

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=8.8e-39  Score=340.52  Aligned_cols=269  Identities=22%  Similarity=0.365  Sum_probs=209.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .++.++|++.+.||+|+||.||+|.+...+. ....+.||+|++....... ...+. .+..++.++.+|+||+.+++++
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~-~~~~~~va~K~~~~~~~~~~~~~~~-~E~~~~~~l~~h~niv~~~~~~   80 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEK-SASCRTVAVKMLKEGATASEYKALM-TELKILIHIGHHLNVVNLLGAC   80 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEecccccccc-ccccceeeeeeccCCCCHHHHHHHH-HHHHHHHhhccCcchhheeeeE
Confidence            3556899999999999999999998654332 2344689999987543222 22333 3345566777899999999887


Q ss_pred             EE-CCEEEEEEecCC-CCHHHHHHHhc-----------------------------------------------------
Q 006772          118 VI-NGKICIAMKFYE-GSVGDRIAQQR-----------------------------------------------------  142 (632)
Q Consensus       118 ~~-~~~l~LVmEy~~-GsL~d~l~~~~-----------------------------------------------------  142 (632)
                      .. +..++++|||++ |+|.+++....                                                     
T Consensus        81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
T cd05054          81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE  160 (337)
T ss_pred             ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence            64 467899999998 57777765422                                                     


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCC
Q 006772          143 ------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP  216 (632)
Q Consensus       143 ------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~  216 (632)
                            ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++.+..... ........++.
T Consensus       161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~~~~~~~~  239 (337)
T cd05054         161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPL  239 (337)
T ss_pred             hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhccCCCCCc
Confidence                  12688999999999999999999999999999999999999999999999999976532211 11112234577


Q ss_pred             ccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 006772          217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD  295 (632)
Q Consensus       217 ~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~D  295 (632)
                      .|||||++.+   ..++.++|||||||+||||++ |..||.+....+...........+..|...++++.+++.+||+.+
T Consensus       240 ~y~aPE~~~~---~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  316 (337)
T cd05054         240 KWMAPESIFD---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNN  316 (337)
T ss_pred             cccCcHHhcC---CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCC
Confidence            8999999864   468899999999999999998 999998765444443444444555667788999999999999999


Q ss_pred             cCCCCCHHHHHHHHHhhh
Q 006772          296 LRNRPLMADILHAFESSQ  313 (632)
Q Consensus       296 P~~RPs~~ell~~Le~~~  313 (632)
                      |++||++.++++.|+.+.
T Consensus       317 p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         317 PEDRPTFSELVEILGDLL  334 (337)
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999988654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-39  Score=349.67  Aligned_cols=253  Identities=23%  Similarity=0.389  Sum_probs=217.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|..++.||+|+||.+++++++...      +.|++|.+.-.... ..+.....+..++++ ..||||+-+.+.+..+
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~------~~~vlK~I~l~~~t~~~r~~A~~E~~lis~-~~hP~iv~y~ds~~~~   75 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDD------KLYVLKKINLEKLTEPERRSAIQEMDLLSK-LLHPNIVEYKDSFEED   75 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCC------ceEEEEEEeccccCchhhHHHHHHHHHHHh-ccCCCeeeeccchhcC
Confidence            368999999999999999999987655      48999998654322 222233334455566 5899999999999988


Q ss_pred             CE-EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          121 GK-ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       121 ~~-l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      +. +||||+||+ |++.+.+.+.++.-|+++.+..|+.|++.|+.|||+++|+|||||+.|||++.++.++|+|||+|+.
T Consensus        76 ~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~  155 (426)
T KOG0589|consen   76 GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKI  155 (426)
T ss_pred             CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhh
Confidence            88 999999999 5888888888778899999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      +....   ....+..||+.||+||.+.+.   +|..++|+|||||++|||++-+.+|.+.+...+..+|.... -.+.|.
T Consensus       156 l~~~~---~~a~tvvGTp~YmcPEil~d~---pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~  228 (426)
T KOG0589|consen  156 LNPED---SLASTVVGTPYYMCPEILSDI---PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPS  228 (426)
T ss_pred             cCCch---hhhheecCCCcccCHHHhCCC---CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCc
Confidence            75532   234567899999999999865   79999999999999999999999999999888887777443 456789


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      ..+.+++.+|..||..+|+.||++.++|..
T Consensus       229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  229 MYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            999999999999999999999999999963

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=2.8e-38  Score=321.30  Aligned_cols=257  Identities=23%  Similarity=0.421  Sum_probs=208.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|+.++|++.++||+|+||.||+|.+...       ..||+|.+..... ..+.+.+ +..++..+ +|+||+.+++.+.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~-------~~v~iK~~~~~~~-~~~~~~~-e~~~l~~l-~h~~i~~~~~~~~   71 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYYNNS-------TKVAVKTLKPGTM-SVQAFLE-EANLMKTL-QHDKLVRLYAVVT   71 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEecCC-------ceEEEEEccCCch-hHHHHHH-HHHHHHhC-CCCCeeeEEEEEc
Confidence            57889999999999999999999986533       3699999865332 2233333 33444444 6999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..+++|||++ |+|.+++.......+++..++.++.|++.||+|||+++++||||||+|||++.++.++|+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~  151 (261)
T cd05072          72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR  151 (261)
T ss_pred             CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccce
Confidence            8999999999997 688888876656678999999999999999999999999999999999999999999999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      ........  ......++..|+|||++..   +.++.++|+|||||++|+|++ |..||.+....+....+.. ......
T Consensus       152 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~  225 (261)
T cd05072         152 VIEDNEYT--AREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQR-GYRMPR  225 (261)
T ss_pred             ecCCCcee--ccCCCccceecCCHHHhcc---CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHc-CCCCCC
Confidence            65332111  1122345678999999863   367889999999999999998 9999998877766655543 233344


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +..++.++.+++.+||+.||++||+++++++.|+.
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         226 MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            56789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=4e-38  Score=321.42  Aligned_cols=262  Identities=20%  Similarity=0.373  Sum_probs=209.4

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |++++|++.+.||+|+||.||+|.+...++   ....||||.+........ ..+..+ ..++..+ +|+||+++++.+.
T Consensus         1 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~---~~~~vaik~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~   75 (266)
T cd05033           1 IDPSYVTIEKVIGGGEFGEVCRGRLKLPGK---KEIDVAIKTLKAGSSDKQRLDFLTE-ASIMGQF-DHPNIIRLEGVVT   75 (266)
T ss_pred             CChHHceeeeEecCCccceEEEEEEccCCC---CcceEEEEEcCCCCChHHHHHHHHH-HHHHHhC-CCCCcceEeEEEe
Confidence            567899999999999999999999875432   235799999875443322 333333 3444444 6899999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..+++|||++ |+|.+++... .+.+++..++.++.|++.||+|||+++|+|+||||+|||+++++.++|+|||+++
T Consensus        76 ~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~  154 (266)
T cd05033          76 KSRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (266)
T ss_pred             cCCceEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence            9999999999998 4777777553 3578999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      ....... ........++..|+|||.+..   ..++.++|+||||+++|||++ |..||......+....+.. ......
T Consensus       155 ~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~---~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~  229 (266)
T cd05033         155 RLEDSEA-TYTTKGGKIPIRWTAPEAIAY---RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED-GYRLPP  229 (266)
T ss_pred             ccccccc-ceeccCCCCCccccChhhhcc---CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc-CCCCCC
Confidence            7631111 011112234678999999864   367889999999999999998 9999988877776665543 334445


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      +..++..+.+++.+||+.||++||++.++++.|+.+
T Consensus       230 ~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         230 PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            678899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.6e-38  Score=327.95  Aligned_cols=267  Identities=22%  Similarity=0.336  Sum_probs=204.7

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      ||+|+||.||++.+..++      +.||+|.+.....  .........+.+++..+ +|+||+.+++.+..+...|+|||
T Consensus         1 lg~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e   73 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTG------KMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMS   73 (277)
T ss_pred             CCCCCceEEEEEEEccCC------cEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEe
Confidence            799999999999987655      4899999864211  11122222334555555 79999999999999999999999


Q ss_pred             cCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCC
Q 006772          129 FYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS  207 (632)
Q Consensus       129 y~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~  207 (632)
                      |+. |+|.+.+.......+++..++.++.|++.||+|||+++|+||||||+|||++.++.++|+|||++......    .
T Consensus        74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~----~  149 (277)
T cd05607          74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG----K  149 (277)
T ss_pred             cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC----c
Confidence            998 56766665544456899999999999999999999999999999999999999999999999998765321    1


Q ss_pred             ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhhccCCCCCCCCCHH
Q 006772          208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVIKKEKPCIPSGLPPA  283 (632)
Q Consensus       208 ~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~~~~~p~~p~~lp~~  283 (632)
                      ......||..|+|||++.+.   .++.++|+|||||++|||++|..||.....    .++...... .........++++
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  225 (277)
T cd05607         150 TITQRAGTNGYMAPEILKEE---PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE-DEVKFEHQNFTEE  225 (277)
T ss_pred             eeeccCCCCCccCHHHHccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc-cccccccccCCHH
Confidence            12234689999999998743   588999999999999999999999976432    222222221 1112222468999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          284 VENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      +.++|.+||+.||++||++.|+++.+  +.+.++...+|..+..+..++|+
T Consensus       226 ~~~li~~~L~~~P~~R~~~~~~~~~~--~~h~~f~~~~~~~~~~~~~~~~~  274 (277)
T cd05607         226 SKDICRLFLAKKPEDRLGSREKNDDP--RKHEFFKTINFPRLEAGLIPPPF  274 (277)
T ss_pred             HHHHHHHHhccCHhhCCCCccchhhh--hcChhhcCCCHHHHhcCcCCCCC
Confidence            99999999999999999998766433  24678888888877766655554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=4e-38  Score=329.46  Aligned_cols=272  Identities=22%  Similarity=0.361  Sum_probs=214.3

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ....+..++|.+.+.||+|+||.||+|.+..... ......||+|+++........+....+..++.++.+|+||+.+++
T Consensus        28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  106 (302)
T cd05055          28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSK-SDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLG  106 (302)
T ss_pred             ccccccHHHeEEcceeeccCCeeEEEEEEecCCC-CCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence            3456777899999999999999999998643221 123357999998754333222333444456677778999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      .+..++..+++|||+. |+|.+++.......+++.++..++.|++.||+|||+++|+|+||||+|||++.++.++|+|||
T Consensus       107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg  186 (302)
T cd05055         107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG  186 (302)
T ss_pred             EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCc
Confidence            9999999999999998 688888765444458999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++........ .......++..|+|||++..   +.++.++|+|||||++|||++ |..||.+....+...........
T Consensus       187 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~  262 (302)
T cd05055         187 LARDIMNDSNY-VVKGNARLPVKWMAPESIFN---CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYR  262 (302)
T ss_pred             ccccccCCCce-eecCCCCcccccCCHhhhcc---CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCc
Confidence            98755322110 11122345788999999864   357889999999999999998 99999887755544444433444


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      +..+...++++.+++.+||+.+|++||++.+++..|+++
T Consensus       263 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         263 MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            455667899999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=4.3e-38  Score=333.61  Aligned_cols=251  Identities=20%  Similarity=0.343  Sum_probs=198.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.+.||+|+||.||+|.+..++      ..||+|++...........+..+..++..+ +|+||+.+++++..
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   74 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSG------LIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS   74 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCC------cEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEE
Confidence            45689999999999999999999987665      489999987543322222233333455554 68999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ++.+++||||++| +|.+++...  ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  152 (331)
T cd06649          75 DGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (331)
T ss_pred             CCEEEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence            9999999999985 777776543  4789999999999999999999986 69999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH---------
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV---------  268 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~---------  268 (632)
                      ....     .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||...+..++...+.         
T Consensus       153 ~~~~-----~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
T cd06649         153 QLID-----SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEG  224 (331)
T ss_pred             cccc-----cccccCCCCcCcCCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccC
Confidence            5422     122345789999999998743   68899999999999999999999998765544322110         


Q ss_pred             ------------------------------------hhccCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 ------------------------------------IKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ------------------------------------~~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                          .....+..+ ..+++++.+||.+||+.||++||++.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~  300 (331)
T cd06649         225 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN  300 (331)
T ss_pred             CccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                                011112222 246889999999999999999999999986

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=6.9e-38  Score=349.28  Aligned_cols=253  Identities=21%  Similarity=0.309  Sum_probs=206.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|.+.+.||+|+||.||+|....+.     ...||+|.+........ .....+..++.. .+|+||+.+++.+..++.
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~-----~~~vv~K~~~~~~~~~~-~~~~~E~~~l~~-l~Hpniv~~~~~~~~~~~  139 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDP-----KEKVVAKFVMLNDERQA-AYARSELHCLAA-CDHFGIVKHFDDFKSDDK  139 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCC-----CeEEEEEEcccCCHHHH-HHHHHHHHHHHh-CCCCCEeEEEEEEEECCE
Confidence            45999999999999999999876542     14788887754433322 233334444444 479999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          123 ICIAMKFYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +||||||++ |+|.+.+...  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence            999999998 6787776543  2357899999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      .... ........+||+.|||||++.+   ..++.++|||||||++|||++|..||.+.+..++...+... ....+|..
T Consensus       220 ~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~  294 (478)
T PTZ00267        220 SDSV-SLDVASSFCGTPYYLAPELWER---KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG-KYDPFPCP  294 (478)
T ss_pred             CCcc-ccccccccCCCccccCHhHhCC---CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCcc
Confidence            3321 1112334679999999999874   36889999999999999999999999998888777776543 33456778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++++.++|.+||+.||++||++.++++
T Consensus       295 ~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        295 VSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            9999999999999999999999999885

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=3e-38  Score=322.92  Aligned_cols=264  Identities=18%  Similarity=0.339  Sum_probs=207.5

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.+.||+|+||.||+|.++.+++   ....+|+|.++.............+..++..+ +||||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   76 (267)
T cd05066           1 IDASCIKIEKVIGAGEFGEVCSGRLKLPGK---REIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTK   76 (267)
T ss_pred             CCHHHeEeeeeecccCCCceEEEEEecCCC---CceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec
Confidence            567899999999999999999998865432   23479999986543222222223333444444 79999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..|++|||++| +|.+++... ...+++.+++.++.|++.||+|||+++++||||||+|||++.++.++|+|||++..
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~  155 (267)
T cd05066          77 SKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRV  155 (267)
T ss_pred             CCccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence            9999999999985 677776543 35789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ...............++..|+|||++.+   ..++.++|+|||||++||+++ |..||...+..+....+.. ...+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  231 (267)
T cd05066         156 LEDDPEAAYTTRGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEE-GYRLPAP  231 (267)
T ss_pred             cccccceeeecCCCccceeecCHhHhcc---CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhC-CCcCCCC
Confidence            5332111111111233568999999864   367889999999999999887 9999998877766665543 2344456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ..+|+.+.+++.+||+++|.+||++.++++.|+.+
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         232 MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            77899999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=4.6e-38  Score=328.95  Aligned_cols=273  Identities=20%  Similarity=0.326  Sum_probs=215.0

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      +..+..++|.+.+.||+|+||.||+|.+...... ......+|+|.+..... .....+.. +..++..+..|+||+.++
T Consensus        12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-e~~~l~~l~~h~~i~~~~   90 (307)
T cd05098          12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHKNIINLL   90 (307)
T ss_pred             cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHH-HHHHHHHhcCCCCEeeEE
Confidence            4456678999999999999999999987543221 12235799999975432 22233333 335566666899999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCe
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN  179 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~N  179 (632)
                      +++..++..|+||||+. |+|.+++....              ...+++.+++.++.|++.||+|||+++++||||||+|
T Consensus        91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  170 (307)
T cd05098          91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN  170 (307)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence            99999999999999998 68888886542              1358899999999999999999999999999999999


Q ss_pred             EEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCC
Q 006772          180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGK  258 (632)
Q Consensus       180 ILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~  258 (632)
                      ||++.++.+||+|||+++......... ......+++.|||||++.+   ..++.++|+|||||++|||++ |..||.+.
T Consensus       171 ill~~~~~~kL~dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~~~g~~p~~~~  246 (307)
T cd05098         171 VLVTEDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  246 (307)
T ss_pred             eEEcCCCcEEECCCcccccccccchhh-ccccCCCccceeChHHhcc---CCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence            999999999999999987543211111 1111234578999999864   357889999999999999998 89999888


Q ss_pred             CHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +..++...+. .......|..++.++.+++.+||..+|.+||++.++++.|+.+...
T Consensus       247 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         247 PVEELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             CHHHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            7776665543 3344556788999999999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=5.6e-38  Score=323.61  Aligned_cols=263  Identities=21%  Similarity=0.382  Sum_probs=207.9

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ++.++|++.+.||+|+||.||+|.+...+.  .....||+|.+........ ..+.+ +..++..+ +|+||+.+.+++.
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~-E~~~l~~l-~h~niv~~~~~~~   77 (283)
T cd05090           2 LPLSAVRFMEELGECAFGKIYKGHLYLPGM--DHAQLVAIKTLKDINNPQQWGEFQQ-EASLMAEL-HHPNIVCLLGVVT   77 (283)
T ss_pred             CChhhceeeeeccccCCcceEEEEEecCCC--CCcceEEEEeccCCCCHHHHHHHHH-HHHHHhhC-CCCCeeeEEEEEe
Confidence            456789999999999999999998754332  2345899999975433222 33333 33455555 7899999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQR---------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~---------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      .++..|++|||++ |+|.+++....               ...+++..++.++.|++.||+|||+++|+||||||+|||+
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili  157 (283)
T cd05090          78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI  157 (283)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE
Confidence            9999999999998 57877775321               1347889999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      ++++.+||+|||+++........ .......++..|+|||++.+   +.++.++|+|||||++|||++ |..||.+.+..
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~  233 (283)
T cd05090         158 GEQLHVKISDLGLSREIYSADYY-RVQPKSLLPIRWMPPEAIMY---GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ  233 (283)
T ss_pred             cCCCcEEeccccccccccCCcce-ecccCCCccceecChHHhcc---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            99999999999998765332111 11223345778999999863   468899999999999999998 99999888776


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ++...+.. ...+..+..+++++.+++.+||+.||++||++.+|++.|..
T Consensus       234 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         234 EVIEMVRK-RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            66555543 33445678899999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=4.1e-38  Score=330.93  Aligned_cols=265  Identities=21%  Similarity=0.342  Sum_probs=207.5

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+..++|++.+.||+|+||.||+|.+...++  .....||+|++...... ..+.+. .+..++.. .+|+||+.+++++
T Consensus         3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~-~e~~~l~~-l~h~niv~~~g~~   78 (316)
T cd05108           3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGE--KVKIPVAIKELREATSPKANKEIL-DEAYVMAS-VDNPHVCRLLGIC   78 (316)
T ss_pred             ccchhhceeeeeeecCCCceEEEEEEecCCC--ccceeEEEEeccccCCHHHHHHHH-HHHHHHHh-CCCCCCCeEEEEE
Confidence            3566889999999999999999999865443  11235999998754332 223333 33344444 4799999999988


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..+ ..++++||+. |+|.+.+... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        79 ~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a  156 (316)
T cd05108          79 LTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (316)
T ss_pred             cCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccc
Confidence            764 5678999998 7888887653 346899999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +........ .......++..|||||++..   ..++.++|+|||||++|||++ |..||.+.+..++.. +......+.
T Consensus       157 ~~~~~~~~~-~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~  231 (316)
T cd05108         157 KLLGADEKE-YHAEGGKVPIKWMALESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLP  231 (316)
T ss_pred             ccccCCCcc-eeccCCccceeecChHHhcc---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCCCCC
Confidence            865332111 11112234678999999863   468899999999999999998 999999877766543 334445555


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+..++.++.+++.+||+.||.+||++.+++..|..+..
T Consensus       232 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         232 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            677899999999999999999999999999998876653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.5e-38  Score=329.76  Aligned_cols=264  Identities=20%  Similarity=0.310  Sum_probs=209.1

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      |+|..++|++.+.||+|+||.||+|.++.++.    ...+|+|.+...........+.++..++.++.+|+||+.+++++
T Consensus         2 ~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~   77 (303)
T cd05088           2 PVLEWNDIKFQDVIGEGNFGQVLKARIKKDGL----RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC   77 (303)
T ss_pred             CccchhhceeeeeecCCCCceEEEEEEccCCc----eeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence            57788999999999999999999999875442    12578888764332222222333445566777899999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      ..++.+|++|||++ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+|||+
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili  157 (303)
T cd05088          78 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV  157 (303)
T ss_pred             CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe
Confidence            99999999999998 67888776432              1358899999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      +.++.+||+|||+++.....    .......++..|+|||++..   ..++.++|+|||||++|||+| |..||.+.+..
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  230 (303)
T cd05088         158 GENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA  230 (303)
T ss_pred             cCCCcEEeCccccCcccchh----hhcccCCCcccccCHHHHhc---cCCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence            99999999999998632110    01111234668999998864   357889999999999999998 99999988777


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +....+. ....+..+..+++++.+++.+||+.||++||++.+++..|+.+.
T Consensus       231 ~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         231 ELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             HHHHHHh-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            6665543 22334456678999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.3e-39  Score=328.00  Aligned_cols=252  Identities=23%  Similarity=0.271  Sum_probs=203.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-H-HHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-A-KVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~-~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|+.+.+|++|+||.||+|+++++++      .||+|.++...+.. . -..+++. .++.++ +||||+.+..+.+-
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~e------IVALKr~kmekek~GFPItsLREI-niLl~~-~H~NIV~vkEVVvG  146 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDE------IVALKRLKMEKEKEGFPITSLREI-NILLKA-RHPNIVEVKEVVVG  146 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcce------eEEeeecccccccCCCcchhHHHH-HHHHhc-CCCCeeeeEEEEec
Confidence            4789999999999999999999998875      89999998654321 1 1223443 344555 59999999887653


Q ss_pred             --CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 --NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 --~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                        -+.+|||||||+.+|..++...+ .+|...++..++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+
T Consensus       147 ~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR  225 (419)
T KOG0663|consen  147 SNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAR  225 (419)
T ss_pred             cccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhh
Confidence              36799999999998888887654 689999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---  274 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---  274 (632)
                      .+...   ...++..+-|.+|.|||.+.+.  ..|+.+.|+||+||++.||+++++.|.|.+..+....|......|   
T Consensus       226 ~ygsp---~k~~T~lVVTLWYRaPELLLG~--~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~  300 (419)
T KOG0663|consen  226 EYGSP---LKPYTPLVVTLWYRAPELLLGA--KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA  300 (419)
T ss_pred             hhcCC---cccCcceEEEeeecCHHHhcCC--cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence            87543   2234445669999999999975  368999999999999999999999999988665555554211111   


Q ss_pred             --------------------------CCCC-CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------------------------CIPS-GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------------------------~~p~-~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                .|+. .++..-.+|++.+|.+||.+|.|+.+.|+
T Consensus       301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence                                      1111 25678899999999999999999999775

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-40  Score=347.63  Aligned_cols=249  Identities=23%  Similarity=0.350  Sum_probs=206.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|+..++||+|.||.||+|.+..++      +.||||++.-......-+.++++..++..+ +++||..+++.+..+..
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~------k~vAiKii~Le~~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~   85 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTK------KVVAIKIIDLEEAEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTK   85 (467)
T ss_pred             cccccchhccccccceeeeeeecccc------ceEEEEEechhhcchhhHHHHHHHHHHHhc-CcchHHhhhhheeeccc
Confidence            56888899999999999999998876      489999997544333223334444445554 56999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ++|+||||. |++++++..  +..+.+..+..++++++.||.|||+++.+|||||+.|||+..+|.+||+|||.+-.+..
T Consensus        86 LwiiMey~~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~  163 (467)
T KOG0201|consen   86 LWIIMEYCGGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN  163 (467)
T ss_pred             HHHHHHHhcCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec
Confidence            999999998 688887743  34558888999999999999999999999999999999999999999999999876644


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      ...   ...++.||+.|||||++.+.   .|+.++||||||++.+||++|.+||....+......| -+..+|.+...++
T Consensus       164 ~~~---rr~tfvGTPfwMAPEVI~~~---~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-pk~~PP~L~~~~S  236 (467)
T KOG0201|consen  164 TVK---RRKTFVGTPFWMAPEVIKQS---GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-PKSAPPRLDGDFS  236 (467)
T ss_pred             hhh---ccccccccccccchhhhccc---cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-cCCCCCccccccC
Confidence            322   22567999999999999843   6899999999999999999999999988775443322 3455666667899


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.+++||..||++||+.||++.++++
T Consensus       237 ~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  237 PPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            99999999999999999999999996

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.1e-38  Score=324.15  Aligned_cols=256  Identities=29%  Similarity=0.470  Sum_probs=203.0

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      +.+.+.||.|.||.||+|.+....  ......|+||+++..... ....+.++. ..+.++ +|+||+.+++++...+..
T Consensus         1 ~~~~~~ig~G~fg~v~~~~~~~~~--~~~~~~V~vk~~~~~~~~~~~~~~~~e~-~~l~~l-~h~ni~~~~g~~~~~~~~   76 (259)
T PF07714_consen    1 IKLIKQIGEGSFGKVYRAEWKQKD--NDKNQPVAVKILKPSSSEEEEEEFLNEI-QILRKL-RHPNIVKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEEESSEEEEEEEEESTT--TSSEEEEEEEEESTTSSHHHHHHHHHHH-HHHHTH-SBTTBE-EEEEEESSSSE
T ss_pred             CEEeeEEccCCCcEEEEEEEEccc--CCCCEEEEEEEeccccccccceeeeecc-cccccc-cccccccccccccccccc
Confidence            367899999999999999998311  134468999999664333 344555544 455666 899999999999988889


Q ss_pred             EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      ++||||++ |+|.+++.......+++..++.++.||+.||.|||+++++|+||+++|||++.++.+||+|||++......
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~  156 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK  156 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999998 68999988765568999999999999999999999999999999999999999999999999999875222


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      ... .......+...|+|||.+...   .++.++||||||+++|||++ |+.||...+..++...+. ....+..+..++
T Consensus       157 ~~~-~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  231 (259)
T PF07714_consen  157 SKY-KNDSSQQLPLRYLAPEVLKDG---EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLK-QGQRLPIPDNCP  231 (259)
T ss_dssp             SSE-EESTTSESGGGGS-HHHHHHS---EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHH-TTEETTSBTTSB
T ss_pred             ccc-ccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc-ccccceeccchh
Confidence            111 111223457899999998743   47899999999999999999 789999988888777774 455566788999


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ..+.++|.+||+.||++||++.++++.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999999999865

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-39  Score=348.36  Aligned_cols=278  Identities=24%  Similarity=0.436  Sum_probs=230.4

Q ss_pred             ccccCCCCCCCC-cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecC---CchhhHHHHHHHHHHHhhh
Q 006772           28 TVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---LKEDCAKVFVNKFEELFPK  103 (632)
Q Consensus        28 ~~~~~~~~~~~~-I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~---~~~~~~~~~~~~~~~il~~  103 (632)
                      ..+.+|.....| +..++..+.++||+|+||+||+|..+..+..  ....||||..+-   ...+...++.++. +++.+
T Consensus       141 ~~L~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~--~~~~VAvK~~k~~~~~~~~~~~e~m~EA-rvMr~  217 (474)
T KOG0194|consen  141 FFLKRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGF--KVVPVAVKTTKGSSELTKEQIKEFMKEA-RVMRQ  217 (474)
T ss_pred             eeecccccccccEEeccCccccceeecccccEEEEEEEEecCCc--eeeeeEEEeecccccccHHHHHHHHHHH-HHHHh
Confidence            357777777766 6679999999999999999999998865421  112399999874   3345555665554 44444


Q ss_pred             ccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          104 FRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       104 l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                       .+|+||+.++|+...+..++||||+|. |+|.+++.... +.++..+...++.+.|.||+|||++++|||||-.+|+|+
T Consensus       218 -l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~  295 (474)
T KOG0194|consen  218 -LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY  295 (474)
T ss_pred             -CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee
Confidence             689999999999999999999999998 58888887643 379999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      +.++.+||+|||+++.......   ......-...|+|||.+.   .+.|++++|||||||++||+++ |..||.+....
T Consensus       296 ~~~~~vKISDFGLs~~~~~~~~---~~~~~klPirWLAPEtl~---~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~  369 (474)
T KOG0194|consen  296 SKKGVVKISDFGLSRAGSQYVM---KKFLKKLPIRWLAPETLN---TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY  369 (474)
T ss_pred             cCCCeEEeCccccccCCcceee---ccccccCcceecChhhhc---cCccccccchhheeeeEEeeeccCCCCCCCCCHH
Confidence            9999999999999875321110   110112367999999997   4579999999999999999999 89999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      ++...|.....+...|...|.++..++.+||..||++||+|.++.+.|+.+....
T Consensus       370 ~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~  424 (474)
T KOG0194|consen  370 EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK  424 (474)
T ss_pred             HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence            9999997777788888999999999999999999999999999999998876543

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=6.8e-38  Score=319.56  Aligned_cols=258  Identities=23%  Similarity=0.429  Sum_probs=210.5

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+..+|.+.+.||+|+||.||+|.+...+      ..||+|.+..... ....+.++. .++..+ .|++|+.+++++..
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~~~K~~~~~~~-~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~   73 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTM-EVEEFLKEA-AVMKEI-KHPNLVQLLGVCTR   73 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCC------ceEEEEEecCCch-HHHHHHHHH-HHHHhC-CCCChhheEEEEcC
Confidence            56788999999999999999999987654      4899999865332 233444433 344444 68999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.++++|||++ |+|.+.+.......+++..++.++.|++.||+|||+++++||||||+|||+++++.+||+|||++..
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~  153 (263)
T cd05052          74 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL  153 (263)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccc
Confidence            999999999997 6788887665556789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||.+.+   ..++.++|+|||||++|||++ |..||.+.+..+....+. ....+..+
T Consensus       154 ~~~~~~~--~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~  227 (263)
T cd05052         154 MTGDTYT--AHAGAKFPIKWTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KGYRMERP  227 (263)
T ss_pred             cccceee--ccCCCCCccccCCHHHhcc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCCCCCC
Confidence            5332111  1112234668999998864   367889999999999999998 999999888777666554 33456677


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ..+|.++.+++.+||+.||++||++.++++.|+.+
T Consensus       228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            88999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.8e-38  Score=326.85  Aligned_cols=264  Identities=18%  Similarity=0.313  Sum_probs=208.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.+.||+|+||.||+|.+..+.. ......||||++...........+.++..++.. .+|+||+.+++++..
T Consensus         2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~~~~~   79 (283)
T cd05091           2 INLSTVRFMEELGEDRFGKVYKGHLFGTAP-GEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR-LQHPNIVCLLGVVTK   79 (283)
T ss_pred             CCHHHHHHHHHhCCCCCCeEEEEEEecCCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEcC
Confidence            566789999999999999999998765421 123458999999754433333333333344444 478999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQ--------------RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE  184 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~--------------~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~  184 (632)
                      .+..++++||+. ++|.+++...              ....+++..++.++.|++.||+|||+++|+||||||+|||+++
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~  159 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD  159 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence            999999999998 5677776422              1235888999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHH
Q 006772          185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI  263 (632)
Q Consensus       185 ~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei  263 (632)
                      ++.+||+|||+++........ .......+++.|+|||++..   +.++.++|+|||||++|||++ |..||.+....++
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  235 (283)
T cd05091         160 KLNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMSPEAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV  235 (283)
T ss_pred             CCceEecccccccccccchhe-eeccCccCCccccCHHHHhc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            999999999998765322111 11122345789999999863   468889999999999999998 8999998888777


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      ...+.. ......+..++..+.+++.+||+.||.+||++++|+..|+
T Consensus       236 ~~~i~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         236 IEMIRN-RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             HHHHHc-CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            766654 3344567889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=4.6e-38  Score=324.31  Aligned_cols=250  Identities=19%  Similarity=0.298  Sum_probs=195.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhcc--CCCceeEeeEEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFR--ESQSVCWLHGISVI  119 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~--~h~~I~~l~~~~~~  119 (632)
                      +|++.+.||+|+||.||+|.++.++      +.||+|.+......  ......++ ..++..+.  .|+||+.+++++..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~e-~~~l~~l~~~~h~ni~~~~~~~~~   73 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSG------HFVALKSVRVQTNEDGLPLSTVRE-VALLKRLEAFDHPNIVRLMDVCAT   73 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCC------cEEEEEEeccCcCCCCCchHHHHH-HHHHHHhhhcCCCCeeeeeeeecc
Confidence            5899999999999999999988765      48999998653211  11122222 23333332  69999999988764


Q ss_pred             -----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          120 -----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       120 -----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                           ...++++|||+.+++.+++.......+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        74 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg  153 (288)
T cd07863          74 SRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG  153 (288)
T ss_pred             ccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccC
Confidence                 356899999999999888876555569999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....    .......||..|+|||++.+   ..++.++|+|||||++|||++|.+||.+.+..+....+......+
T Consensus       154 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~  226 (288)
T cd07863         154 LARIYSCQ----MALTPVVVTLWYRAPEVLLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP  226 (288)
T ss_pred             ccccccCc----ccCCCccccccccCchHhhC---CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCC
Confidence            98765321    11233468999999999864   368899999999999999999999998877655444433211000


Q ss_pred             -------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 -------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 -------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                               .....++.++.++|.+||+.||++||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                                     011356788999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=8.9e-38  Score=326.04  Aligned_cols=273  Identities=20%  Similarity=0.306  Sum_probs=214.9

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCC-CcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSAD-DFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~-~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...+..++|++.+.||+|+||.||+|.+..... .......||+|.+...........+..+..++..+.+|+||+.+++
T Consensus         9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101           9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            345778999999999999999999998643221 1123357999998654322222223333445666668999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      .+...+..|++|||+. |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            9999999999999998 58887776532              13578889999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS  259 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~  259 (632)
                      |++.++.+||+|||+++........ .......+++.|+|||++.+   ..++.++|+||||+++|||++ |..||.+.+
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  244 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  244 (304)
T ss_pred             EEcCCCcEEECCCccceeccccccc-ccccCCCCCceeeCchhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999865332111 11122345778999999864   357889999999999999998 899999888


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..++...+.. ......+..++.++.+++.+||+.+|.+||++.++++.|+.+..
T Consensus       245 ~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         245 VEELFKLLKE-GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            8877766543 33445677899999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=9.9e-38  Score=323.29  Aligned_cols=273  Identities=20%  Similarity=0.321  Sum_probs=212.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .|+..+.||+|+||+||+|.+..++      +.||+|.+.+....  ........+..++..+ +|++++.+.+.+..++
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~   73 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATG------KMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKD   73 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCC------cEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCC
Confidence            4788899999999999999987655      48999998653211  1112222333455554 7899999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|++|||+.| +|.+.+.......+++..+..++.|++.||.|||+++|+||||||+|||+++++.++|+|||++....
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          74 ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            99999999985 66666655444579999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--hccCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI--KKEKPCIPS  278 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~--~~~~p~~p~  278 (632)
                      ..    .......|+..|+|||++.+   ..++.++|+|||||++|||++|..||.+.........+..  ......++.
T Consensus       154 ~~----~~~~~~~g~~~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd05632         154 EG----ESIRGRVGTVGYMAPEVLNN---QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSA  226 (285)
T ss_pred             CC----CcccCCCCCcCccChHHhcC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCc
Confidence            21    12234578999999999864   3688899999999999999999999988765433222221  122344567


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .+++++.+|+.+||+.||++||+     +.++++      +.++....|.....+...+++.+
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05632         227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR------HPFFRNMNFKRLEAGMLDPPFVP  283 (285)
T ss_pred             cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc------ChhhhcCCHHHHhcCcCCCCCCC
Confidence            88999999999999999999999     455554      56777777777666666655543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.9e-38  Score=347.82  Aligned_cols=248  Identities=25%  Similarity=0.333  Sum_probs=194.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      ..+|++.+.||+|+||.||+|.+..++      +.||||.+......     ..++..++..+ +|+||+.+++++... 
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~------~~vAiK~i~~~~~~-----~~~Ei~il~~l-~h~niv~l~~~~~~~~  132 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTS------EKVAIKKVLQDPQY-----KNRELLIMKNL-NHINIIFLKDYYYTEC  132 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCC------CEEEEEEEecCcch-----HHHHHHHHHhc-CCCCCcceeeeEeecc
Confidence            468999999999999999999987655      48999988543221     22333444444 789999988776432 


Q ss_pred             -------CEEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEE
Q 006772          121 -------GKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVL  190 (632)
Q Consensus       121 -------~~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL  190 (632)
                             ..+++||||+++++.+.+...  .+..+++..++.++.||+.||+|||+++|+||||||+|||++.++ .+||
T Consensus       133 ~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL  212 (440)
T PTZ00036        133 FKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKL  212 (440)
T ss_pred             cccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceee
Confidence                   257799999999988877643  346799999999999999999999999999999999999999665 7999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||+|+.+...    .......||+.|||||++.+.  ..++.++|+|||||++|||++|.+||.+.+..+....+...
T Consensus       213 ~DFGla~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~  286 (440)
T PTZ00036        213 CDFGSAKNLLAG----QRSVSYICSRFYRAPELMLGA--TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQV  286 (440)
T ss_pred             eccccchhccCC----CCcccCCCCcCccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            999999865322    122345789999999998643  35889999999999999999999999988765544443321


Q ss_pred             ccC---------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEK---------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~---------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...                           ..+|...|+++.+||.+||++||.+||++.|++.
T Consensus       287 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        287 LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            110                           1134567889999999999999999999999886

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4.8e-38  Score=329.13  Aligned_cols=253  Identities=19%  Similarity=0.316  Sum_probs=199.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|++..++      +.||+|.+.............++..++..+ +|+||+.+++++..++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   77 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTE------NLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDK   77 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCC------CeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCC
Confidence            478999999999999999999987654      489999987543222222222233444444 6899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..|+||||+++++.+.+... +..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        78 ~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  156 (309)
T cd07872          78 SLTLVFEYLDKDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV  156 (309)
T ss_pred             eEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence            99999999999988887653 34689999999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--------  273 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--------  273 (632)
                      .   ........+|+.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+..+....+......        
T Consensus       157 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (309)
T cd07872         157 P---TKTYSNEVVTLWYRPPDVLLGS--SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG  231 (309)
T ss_pred             C---ccccccccccccccCCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence            1   1122234679999999998642  35788999999999999999999999987765544433211000        


Q ss_pred             ------------CC--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ------------PC--------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ------------p~--------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                  +.        ....+++++.++|.+||+.||.+||++.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence                        00        11347889999999999999999999999886

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.9e-38  Score=320.80  Aligned_cols=263  Identities=21%  Similarity=0.377  Sum_probs=210.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |+.++|++.+.||+|+||.||+|.++.... ......||+|.+....... ...+.+ +..++..+ .|+||+.+++++.
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~-e~~~l~~~-~~~~i~~~~~~~~   79 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVK-GEPETRVAIKTVNENASMRERIEFLN-EASVMKEF-NCHHVVRLLGVVS   79 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCC-CCcceeEEEEecCCccCHHHHHHHHH-HHHHHHhC-CCCceeEEEEEEc
Confidence            677899999999999999999999875431 1234689999986543222 223333 33444444 7899999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEE
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQR--------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~--------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vk  189 (632)
                      .++..+++|||+. |+|.+++....        ...+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k  159 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK  159 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence            9999999999997 68888876532        13478889999999999999999999999999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 006772          190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV  268 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~  268 (632)
                      |+|||+++........ .......++..|+|||.+..   +.++.++|+|||||++|||++ |..||.+.+..+....+.
T Consensus       160 l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  235 (277)
T cd05032         160 IGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKD---GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI  235 (277)
T ss_pred             ECCcccchhhccCccc-ccCCCCCccccccCHHHHhc---CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence            9999998765332211 11223456889999999863   457889999999999999998 999999888777766655


Q ss_pred             hhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       269 ~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                       ....+.+|..++.++.+++.+||+.+|++||++.+++..|+
T Consensus       236 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         236 -DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             -cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence             44556678889999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.1e-37  Score=318.24  Aligned_cols=263  Identities=19%  Similarity=0.353  Sum_probs=206.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |..++|+..+.||+|+||.||+|.+..++.   ....+|+|.+..... ...+.+..+ ..++..+ .|+|++.+.+++.
T Consensus         2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~   76 (268)
T cd05063           2 IHPSHITKQKVIGAGEFGEVFRGILKMPGR---KEVAVAIKTLKPGYTEKQRQDFLSE-ASIMGQF-SHHNIIRLEGVVT   76 (268)
T ss_pred             CChHHceEeeEecCCCCccEEEEEEecCCC---CceEEEEEeccccCCHHHHHHHHHH-HHHHhcC-CCCCeeEEEEEEc
Confidence            567899999999999999999999875432   234799999865432 222333333 3444444 6899999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..+..|+||||+++ +|.+++.. ..+.+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||++.
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  155 (268)
T cd05063          77 KFKPAMIITEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSR  155 (268)
T ss_pred             cCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccce
Confidence            99999999999985 66666543 34678999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .................+..|+|||++..   ..++.++|+|||||++|||++ |..||...+..+....+.. ....+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-~~~~~~  231 (268)
T cd05063         156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAY---RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-GFRLPA  231 (268)
T ss_pred             ecccccccceeccCCCcCceecCHHHhhc---CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-CCCCCC
Confidence            65322111111111123457999999863   357889999999999999998 9999988877776666653 234444


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      +..++.++.+++.+||+.||++||++.++++.|+++
T Consensus       232 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         232 PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            567899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-38  Score=363.59  Aligned_cols=272  Identities=24%  Similarity=0.394  Sum_probs=225.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      |.+++++.++.+.||+|.||.||.|+......+.. ...||||.+++.........+-++..+++++ .||||+.+.|++
T Consensus       687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~  764 (1025)
T KOG1095|consen  687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVC  764 (1025)
T ss_pred             ccCChhheEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEee
Confidence            66778999999999999999999999886654322 3579999998765544444334444555554 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR-----GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~-----~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      .+.+..+|++|||+ |+|+.++.+.+     ...++..+.+.++.|||+|+.||+++++|||||..+|+||+....+||+
T Consensus       765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa  844 (1025)
T KOG1095|consen  765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA  844 (1025)
T ss_pred             cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence            99999999999998 67888776542     3568899999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+|+-+....+...... ..-...|||||.+.   .+.+|.++|||||||+|||++| |..||.+.+..++...+..+
T Consensus       845 DFGlArDiy~~~yyr~~~~-a~lPvkWm~PEsl~---d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g  920 (1025)
T KOG1095|consen  845 DFGLARDIYDKDYYRKHGE-AMLPVKWMPPESLK---DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG  920 (1025)
T ss_pred             ccchhHhhhhchheeccCc-cccceecCCHHHHh---hcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC
Confidence            9999984322211111111 11247899999997   4679999999999999999999 99999999999988877665


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      + +...|..||..+.++|..||+.+|++||++..|++.+..+.+..
T Consensus       921 g-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  921 G-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             C-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence            5 77889999999999999999999999999999999887776544

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=9.2e-38  Score=316.98  Aligned_cols=253  Identities=23%  Similarity=0.357  Sum_probs=204.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |++++|++.+.||+|+||.||+|.++..       ..+|+|.+..... ....+.+ +..++..+ +|+||+.+++++..
T Consensus         1 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~-------~~~a~K~~~~~~~-~~~~~~~-e~~~l~~l-~h~~i~~~~~~~~~   70 (256)
T cd05114           1 INPSELTFMKELGSGQFGVVHLGKWRAQ-------IKVAIKAINEGAM-SEEDFIE-EAKVMMKL-SHPKLVQLYGVCTQ   70 (256)
T ss_pred             CCHHHcEEeeEecCCcCceEEEEEeccC-------ceEEEEecccCCc-cHHHHHH-HHHHHHHC-CCCCceeEEEEEcc
Confidence            5678999999999999999999987542       3699998864332 2233444 33445554 68999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..+++|||++ |+|.+.+... .+.+++..++.++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++.
T Consensus        71 ~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~  149 (256)
T cd05114          71 QKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRY  149 (256)
T ss_pred             CCCEEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccc
Confidence            999999999998 6777776543 34689999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||.+.+.   .++.++|+||||+++|||++ |+.||...+..+....+.. ...+..|
T Consensus       150 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~  223 (256)
T cd05114         150 VLDDEYT--SSSGAKFPVKWSPPEVFNFS---KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR-GFRLYRP  223 (256)
T ss_pred             cCCCcee--ccCCCCCchhhCChhhcccC---ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCC
Confidence            4322111  11122356789999998643   57889999999999999999 9999998887777666653 3344556


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ...+.++.+++.+||+.||.+||++.++++.|
T Consensus       224 ~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         224 KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            77889999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=8.3e-38  Score=350.14  Aligned_cols=254  Identities=21%  Similarity=0.319  Sum_probs=203.6

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++.+.||+|+||+||+|.+..++      +.||||++.....  .....+.+ +...+.. .+|++++.++..+.
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g------~~vAvK~i~~~~~~~~~~~~~~~-Ei~~l~~-~~h~~iv~~~~~~~  101 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDG------EPFAVKVVDMEGMSEADKNRAQA-EVCCLLN-CDFFSIVKCHEDFA  101 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCC------CEEEEEEEecccCCHHHHHHHHH-HHHHHhc-CCCCcEEEeeccee
Confidence            4479999999999999999999987655      4899999865432  22222222 2233333 36889988877665


Q ss_pred             ECC--------EEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc
Q 006772          119 ING--------KICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ  187 (632)
Q Consensus       119 ~~~--------~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~  187 (632)
                      ..+        .+++||||++ |+|.+.+....  ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.
T Consensus       102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~  181 (496)
T PTZ00283        102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL  181 (496)
T ss_pred             cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC
Confidence            332        4789999998 68888776432  357899999999999999999999999999999999999999999


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      +||+|||+++.+.... ........+||+.|||||++.+   ..++.++|||||||++|||++|+.||.+.+..+++..+
T Consensus       182 vkL~DFGls~~~~~~~-~~~~~~~~~Gt~~Y~aPE~~~~---~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~  257 (496)
T PTZ00283        182 VKLGDFGFSKMYAATV-SDDVGRTFCGTPYYVAPEIWRR---KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT  257 (496)
T ss_pred             EEEEecccCeeccccc-cccccccccCCcceeCHHHhCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            9999999998653321 1122334679999999999974   36889999999999999999999999998887777766


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .. .....+|..+++++.+++.+||+.||.+||++.++++
T Consensus       258 ~~-~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        258 LA-GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             hc-CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            54 3344567889999999999999999999999999886

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.9e-37  Score=325.60  Aligned_cols=271  Identities=22%  Similarity=0.327  Sum_probs=213.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+..++|.+.+.||+|+||.||+|.+...... ......+|+|.+...... ....+.. +..++..+.+|+||+.++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLIS-EMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHH-HHHHHHhccCCCCeeeEEEE
Confidence            45668999999999999999999987532211 123357999998754332 2233333 34556667689999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEE
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLL  181 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NIL  181 (632)
                      +..++.+|++|||+. |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+|||
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  166 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL  166 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence            998999999999998 68888876532              245889999999999999999999999999999999999


Q ss_pred             EecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCH
Q 006772          182 LSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV  260 (632)
Q Consensus       182 ld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~  260 (632)
                      ++.++.+||+|||+++........ .......++..|||||++.+   +.++.++|+|||||++|||++ |..||.+.+.
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  242 (314)
T cd05099         167 VTEDNVMKIADFGLARGVHDIDYY-KKTSNGRLPVKWMAPEALFD---RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV  242 (314)
T ss_pred             EcCCCcEEEccccccccccccccc-cccccCCCCccccCHHHHcc---CCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999765322111 11111234568999999864   368889999999999999999 8999998887


Q ss_pred             HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       261 ~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      .+.+..+.. ......+..++.++.+++.+||..||++||++.++++.|+.+...
T Consensus       243 ~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~  296 (314)
T cd05099         243 EELFKLLRE-GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA  296 (314)
T ss_pred             HHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence            777666543 344556788899999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.1e-37  Score=320.49  Aligned_cols=264  Identities=19%  Similarity=0.345  Sum_probs=206.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+..++|++.+.||+|+||.||+|.+.....+ .....||||.+..... .....+.++. .++.. .+|+||+.+++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~-~~~~~~aik~~~~~~~~~~~~~~~~e~-~~l~~-l~~~~iv~~~~~~   78 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKD-EPETRVAIKTVNEAASMRERIEFLNEA-SVMKE-FNCHHVVRLLGVV   78 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCC-CceeEEEEEeccccCCHHHHHHHHHHH-HHHHh-CCCCCeeeEEEEE
Confidence            35668899999999999999999987643221 2235799999865332 2222333333 34444 4789999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRG--------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~--------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                      ..++..++||||+. |+|.+++.....        ..+++..++.++.|++.||+|||+++++||||||+|||+++++.+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~  158 (277)
T cd05062          79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  158 (277)
T ss_pred             cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCE
Confidence            98899999999998 578777754321        235778899999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i  267 (632)
                      +|+|||+++........ .......+++.|||||++.+   +.++.++|+|||||++|||++ |..||.+.+..+....+
T Consensus       159 ~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~  234 (277)
T cd05062         159 KIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV  234 (277)
T ss_pred             EECCCCCccccCCccee-ecCCCCccCHhhcChhHhhc---CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999998754322111 11112345788999999863   468899999999999999999 78999988777666554


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      . ....+..+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus       235 ~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         235 M-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             H-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            4 33445567889999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=6.2e-38  Score=321.67  Aligned_cols=264  Identities=23%  Similarity=0.414  Sum_probs=209.4

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|.+.+.||+|+||.||+|.+..... ....+.||||.+.............++..++..+ .|+||+.+++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   79 (280)
T cd05049           2 VQRDTIVLKRELGEGAFGKVFLGECYHLEP-ENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTE   79 (280)
T ss_pred             CChHHhhHHhhccccCCceEeeeeeccccC-cCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEec
Confidence            356789999999999999999998765321 1223589999987654442233333334555555 68999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      ++..+++|||++ |+|.+++....            ...+++..+..++.|++.||+|||+++++||||||+|||++.++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence            999999999998 57877775432            24578899999999999999999999999999999999999999


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH  265 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~  265 (632)
                      .++|+|||+++........ .......+++.|+|||++.+   +.++.++|+|||||++|||++ |..||.+.+..+...
T Consensus       160 ~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~  235 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMY---RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE  235 (280)
T ss_pred             eEEECCcccceecccCcce-ecCCCCcccceecChhhhcc---CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            9999999998754322111 11122345789999999874   468899999999999999998 999999888777666


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      .+. ....+..+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus       236 ~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         236 CIT-QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            554 33344456789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.2e-37  Score=324.34  Aligned_cols=259  Identities=21%  Similarity=0.314  Sum_probs=206.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++.    ...+++|.++..... ..+.+ ..+..++.++.+|+||+.+++++...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~~ik~~~~~~~~~~~~~~-~~E~~~l~~l~~hp~iv~~~~~~~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGL----KMNAAIKMLKEFASENDHRDF-AGELEVLCKLGHHPNIINLLGACENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCC----cceeEEEEccccCCHHHHHHH-HHHHHHHHhhcCCCchhheEEEEccCC
Confidence            689999999999999999998865442    125788888643322 22333 333455667768999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          122 KICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      .+|++|||++ |+|.+++....              ...+++..++.++.|++.||+|||+++|+||||||+|||+++++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  156 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL  156 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence            9999999998 68888886532              13588999999999999999999999999999999999999999


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH  265 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~  265 (632)
                      .+||+|||++......    ........+..|+|||++..   ..++.++|+|||||++|||++ |..||.+.+..+...
T Consensus       157 ~~kl~dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~  229 (297)
T cd05089         157 ASKIADFGLSRGEEVY----VKKTMGRLPVRWMAIESLNY---SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE  229 (297)
T ss_pred             eEEECCcCCCccccce----eccCCCCcCccccCchhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            9999999988532110    01111123557999999864   367889999999999999997 999999988877666


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+.. ...+..|..++.++.+++.+||+.||.+||++.++++.|+.+..
T Consensus       230 ~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         230 KLPQ-GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             HHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            5543 33445677899999999999999999999999999998877664

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.4e-37  Score=317.95  Aligned_cols=263  Identities=19%  Similarity=0.356  Sum_probs=206.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |+..+|++.+.||+|+||.||+|.+...+.   ....||||++...... ....+.. +..++..+ +|+||+.+.+++.
T Consensus         1 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~-e~~~l~~l-~h~ni~~~~~~~~   75 (269)
T cd05065           1 IDVSCVKIEEVIGAGEFGEVCRGRLKLPGK---REIFVAIKTLKSGYTEKQRRDFLS-EASIMGQF-DHPNIIHLEGVVT   75 (269)
T ss_pred             CChHHeEEEeEecCCCCCeEEEEEEecCCC---CceeEEEEEcCCCCCHHHHHHHHH-HHHHHHhC-CCcCcceEEEEEC
Confidence            456789999999999999999999876542   2347999998754322 2333333 33444444 7999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..+++|||++| +|.+++.. ..+.+++.+++.++.|++.||+|||+++++||||||+|||++.++.++|+|||++.
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~  154 (269)
T cd05065          76 KSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (269)
T ss_pred             CCCceEEEEecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccc
Confidence            99999999999985 66665543 34578999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCcccccc--CCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          198 LLLGRSLSDSDMALRL--GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~--GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ................  .+..|+|||++..   +.++.++|+|||||++|||++ |..||...+..+....+. .....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~~~  230 (269)
T cd05065         155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDYRL  230 (269)
T ss_pred             ccccCccccccccccCCCcceeecCHhHhcc---CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcC
Confidence            6533211111111111  2457999999863   468889999999999999887 999999888777666654 23344


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      +.+..+|..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         231 PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            45678899999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=6.8e-38  Score=335.01  Aligned_cols=252  Identities=22%  Similarity=0.343  Sum_probs=195.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ...++|++.+.||+|+||.||+|.+..++      +.||||++...........+.++..++..+ +|+||+.+++++..
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  143 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRPTG------RLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDH  143 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECCCC------CEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEecc
Confidence            34578999999999999999999987655      489999996544333333334444455554 68999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++.+++||||+.|..+..     ....++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       144 ~~~~~lv~e~~~~~~L~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~  218 (353)
T PLN00034        144 NGEIQVLLEFMDGGSLEG-----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL  218 (353)
T ss_pred             CCeEEEEEecCCCCcccc-----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence            999999999999643321     124567888899999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhhccCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---EIYHSVVIKKEKP  274 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---ei~~~i~~~~~~p  274 (632)
                      ....   .......||..|+|||++....  ....+.++|||||||++|||++|+.||......   .....+ .....+
T Consensus       219 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~  294 (353)
T PLN00034        219 AQTM---DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI-CMSQPP  294 (353)
T ss_pred             cccc---ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH-hccCCC
Confidence            3221   1123457899999999985321  112356899999999999999999999753322   222222 223445


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+..++.++.+||.+||+.||++||++.|+++
T Consensus       295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             CCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            567789999999999999999999999999887

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.3e-37  Score=322.74  Aligned_cols=271  Identities=20%  Similarity=0.342  Sum_probs=209.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      +.||+|.+.+....  ........+..++..+ .|++++.+.+.+..++
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~   73 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKD   73 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCC------ceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCC
Confidence            4788999999999999999998765      48999998653211  1111122233444444 7899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+||||+. |+|.+++.......+++.+++.++.|++.||.|||+++|+||||||+|||+++++.++|+|||++....
T Consensus        74 ~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05630          74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  153 (285)
T ss_pred             EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence            9999999998 577777755444579999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhhccCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---EIYHSVVIKKEKPCIP  277 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---ei~~~i~~~~~~p~~p  277 (632)
                      ..    .......||..|||||++..   ..++.++|+|||||++|||++|..||......   +...... ......++
T Consensus       154 ~~----~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~  225 (285)
T cd05630         154 EG----QTIKGRVGTVGYMAPEVVKN---ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV-KEVQEEYS  225 (285)
T ss_pred             CC----ccccCCCCCccccChHHHcC---CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh-hhhhhhcC
Confidence            21    11223478999999999874   46889999999999999999999999875321   2222221 12233456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      ..+++++.+|+.+||+.||++||+     +.|+++      ++++...+|..+......+++.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~------h~~~~~~~~~~~~~~~~~~~~~  282 (285)
T cd05630         226 EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE------HPLFKQINFKRLEAGMLEPPFK  282 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc------ChhhhccCHHHHhcCCCCCCCC
Confidence            788999999999999999999999     778775      5667677777665555554443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-39  Score=348.70  Aligned_cols=253  Identities=27%  Similarity=0.385  Sum_probs=212.3

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .-+.|..+.+.-++-||.|+.|.||+|+.+.        +.||||+++..++...+.        +.+ .+|+||+.+.|
T Consensus       117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~n--------etVAVKKV~elkETdIKH--------LRk-LkH~NII~FkG  179 (904)
T KOG4721|consen  117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHN--------ETVAVKKVRELKETDIKH--------LRK-LKHPNIITFKG  179 (904)
T ss_pred             hhccCCHHHhhhhhhhccCcccceeeeeccC--------ceehhHHHhhhhhhhHHH--------HHh-ccCcceeeEee
Confidence            3445667778888999999999999998764        479999986554433322        222 37999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      +|.+.-.+|||||||. |-|.+.+..  +..++......+..+||.|+.|||.+.|||||||.-||||+.+..+||+|||
T Consensus       180 VCtqsPcyCIiMEfCa~GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFG  257 (904)
T KOG4721|consen  180 VCTQSPCYCIIMEFCAQGQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFG  257 (904)
T ss_pred             eecCCceeEEeeeccccccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEecccc
Confidence            9999999999999998 888888864  4588999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      -++.....    .+...++||..|||||+++.+   +.++|+|||||||+|||||||..||...+...|..-+-......
T Consensus       258 TS~e~~~~----STkMSFaGTVaWMAPEvIrne---PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~L  330 (904)
T KOG4721|consen  258 TSKELSDK----STKMSFAGTVAWMAPEVIRNE---PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHL  330 (904)
T ss_pred             chHhhhhh----hhhhhhhhhHhhhCHHHhhcC---CcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccc
Confidence            88765321    344568999999999999855   78999999999999999999999998877655544443344556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +.|+.||.-++-||+.||+..|.+||++.+|+..|+-...
T Consensus       331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence            6789999999999999999999999999999987765433

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.8e-37  Score=314.34  Aligned_cols=250  Identities=26%  Similarity=0.454  Sum_probs=204.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      +|++.+.||+|+||.||++.+..++      ..||+|.+..............+..++..+ +|+|++.+.+.+..++.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   73 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSD------QKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHL   73 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCC------ceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEE
Confidence            5899999999999999999987655      489999986433222222222333344444 789999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      |++|||++ |++.+++.......+++..++.++.|++.||.|||+++|+|+||||+|||+++++.++|+|||++......
T Consensus        74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence            99999998 57888877655667899999999999999999999999999999999999999999999999998765322


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCH
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP  282 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~  282 (632)
                      .   .......|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+.. ......|..++.
T Consensus       154 ~---~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (255)
T cd08219         154 G---AYACTYVGTPYYVPPEIWENM---PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ-GSYKPLPSHYSY  226 (255)
T ss_pred             c---cccccccCCccccCHHHHccC---CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc-CCCCCCCcccCH
Confidence            1   112234689999999998643   578899999999999999999999998877666555543 344456778999


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          283 AVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       283 ~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+.++|.+||+.||++||++.+++.
T Consensus       227 ~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         227 ELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             HHHHHHHHHHhCCcccCCCHHHHhh
Confidence            9999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.8e-38  Score=340.38  Aligned_cols=249  Identities=19%  Similarity=0.296  Sum_probs=194.5

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .-+...+|++.+.||+|+||.||+|.+..++      +.||||....      ..+. .+..++..+ +||||+.+++++
T Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~------~~vaiK~~~~------~~~~-~E~~il~~l-~HpnIv~~~~~~  152 (391)
T PHA03212         87 AGIEKAGFSILETFTPGAEGFAFACIDNKTC------EHVVIKAGQR------GGTA-TEAHILRAI-NHPSIIQLKGTF  152 (391)
T ss_pred             cccccCCcEEEEEEcCCCCeEEEEEEECCCC------CEEEEechhh------hhhH-HHHHHHHhC-CCCCCCCEeEEE
Confidence            3456688999999999999999999998766      4899997532      1222 233455555 789999999999


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..++..|++||++.++|.+++...  ..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       153 ~~~~~~~lv~e~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~  230 (391)
T PHA03212        153 TYNKFTCLILPRYKTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAAC  230 (391)
T ss_pred             EECCeeEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence            999999999999999988887653  478999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhh
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-------VEEIYHSVVIK  270 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-------~~ei~~~i~~~  270 (632)
                      .....  .........||+.|+|||++.+   ..++.++|+|||||++|||++|..||....       .......+...
T Consensus       231 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~  305 (391)
T PHA03212        231 FPVDI--NANKYYGWAGTIATNAPELLAR---DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR  305 (391)
T ss_pred             ccccc--cccccccccCccCCCChhhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence            53221  1122334679999999999874   368899999999999999999998876432       11111111100


Q ss_pred             ------------------------ccCCCCC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 ------------------------KEKPCIP---------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ------------------------~~~p~~p---------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                              ......+         ..++.++.+||.+||+.||++|||+.|+++
T Consensus       306 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        306 SGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                                    0000001         135678999999999999999999999886

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.3e-37  Score=333.43  Aligned_cols=248  Identities=21%  Similarity=0.227  Sum_probs=192.4

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      -.++|++.+.||+|+||.||+|.+..++      ..||+|++....  ......+.++ ..++.. .+|+||+.+++++.
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E-~~~l~~-l~h~niv~~~~~~~   90 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLG------INVAVKKLSRPFQNQTHAKRAYRE-LVLLKC-VNHKNIISLLNVFT   90 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCC------ceeEEEEecccccchhHHHHHHHH-HHHHHh-CCCCCEeeeeeeec
Confidence            3578999999999999999999987655      489999986532  1222233333 233443 47999999999886


Q ss_pred             EC------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          119 IN------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       119 ~~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ..      ..+|+||||+++++.+.+.    ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~D  166 (359)
T cd07876          91 PQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD  166 (359)
T ss_pred             cCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEec
Confidence            54      3579999999998887763    2588999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh--
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK--  270 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~--  270 (632)
                      ||+++.....    .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||.+.+..+.+..+...  
T Consensus       167 fg~a~~~~~~----~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~  239 (359)
T cd07876         167 FGLARTACTN----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG  239 (359)
T ss_pred             CCCccccccC----ccCCCCcccCCCCCchhccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            9998754221    122335789999999999743   6888999999999999999999999877654332222110  


Q ss_pred             ------------------ccCCC--------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 ------------------KEKPC--------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ------------------~~~p~--------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                        ...+.                    .+...++++.+||.+||..||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         240 TPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             CCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence                              01111                    11124678999999999999999999999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=9e-38  Score=332.99  Aligned_cols=270  Identities=22%  Similarity=0.349  Sum_probs=206.9

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.+.||+|+||.||+|.+..... ....+.||||+++.............+..++..+.+|+||+.+++++..
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   82 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCc-cccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence            456899999999999999999998754321 1334689999997543222222233344566777789999999987754


Q ss_pred             -CCEEEEEEecCC-CCHHHHHHHhc-------------------------------------------------------
Q 006772          120 -NGKICIAMKFYE-GSVGDRIAQQR-------------------------------------------------------  142 (632)
Q Consensus       120 -~~~l~LVmEy~~-GsL~d~l~~~~-------------------------------------------------------  142 (632)
                       ++.++++|||++ |+|.+++....                                                       
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE  162 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence             467899999998 68887775421                                                       


Q ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccc
Q 006772          143 ----------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR  212 (632)
Q Consensus       143 ----------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~  212 (632)
                                ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....... .......
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~  241 (343)
T cd05103         163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDA  241 (343)
T ss_pred             hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-hhhcCCC
Confidence                      12468888999999999999999999999999999999999999999999999876422110 0111123


Q ss_pred             cCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006772          213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGC  291 (632)
Q Consensus       213 ~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~c  291 (632)
                      .++..|+|||++.+   ..++.++|+|||||++|||++ |..||.+....+...........+..|..+++++.+++.+|
T Consensus       242 ~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c  318 (343)
T cd05103         242 RLPLKWMAPETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC  318 (343)
T ss_pred             CCCcceECcHHhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHH
Confidence            45678999999864   367889999999999999997 99999876543333333334445556777889999999999


Q ss_pred             hhcCcCCCCCHHHHHHHHHhhhh
Q 006772          292 FEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       292 L~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      |+.||++||++.+|++.|+.+.+
T Consensus       319 l~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         319 WHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             ccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999887653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.4e-37  Score=318.17  Aligned_cols=265  Identities=22%  Similarity=0.347  Sum_probs=206.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+..++..  ....||+|++..............+..++.. .+|+||+.+.+++.
T Consensus         3 ~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~--~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~   79 (279)
T cd05109           3 ILKETELKKVKVLGSGAFGTVYKGIWIPDGEN--VKIPVAIKVLRENTSPKANKEILDEAYVMAG-VGSPYVCRLLGICL   79 (279)
T ss_pred             ccchhheeeeeecCCCCCceEEEEEEecCCCc--cceEEEEEEecCCCCHHHHHHHHHHHHHHHh-cCCCCCceEEEEEc
Confidence            35678999999999999999999998765532  1235899998654332222222233333333 47899999999886


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      . ...+++|||++ |+|.+.+... ...+++..++.++.|++.||+|||+++|+||||||+|||+++++.+||+|||+++
T Consensus        80 ~-~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~  157 (279)
T cd05109          80 T-STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (279)
T ss_pred             C-CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCcee
Confidence            5 45789999998 7888877543 3579999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      ........ .......+++.|+|||++.+   ..++.++|+|||||++|||++ |..||.......+...+. ....+..
T Consensus       158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~  232 (279)
T cd05109         158 LLDIDETE-YHADGGKVPIKWMALESILH---RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGERLPQ  232 (279)
T ss_pred             ecccccce-eecCCCccchhhCCHHHhcc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCcCCC
Confidence            65322111 11112234678999999863   368899999999999999998 999998877666555443 3444555


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +..++.++.+++.+||+.||++||++.++++.|+.+.
T Consensus       233 ~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         233 PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            6789999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-37  Score=313.99  Aligned_cols=256  Identities=24%  Similarity=0.424  Sum_probs=207.4

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++.++|++.+.||+|+||.||+|.+..+       +.||+|.++.... ....+.+ +..++..+ +|+|++.+++++..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-------~~v~iK~~~~~~~-~~~~~~~-e~~~l~~l-~h~~i~~~~~~~~~   72 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNT-------TPVAVKTLKPGTM-DPKDFLA-EAQIMKKL-RHPKLIQLYAVCTL   72 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCC-------eEEEEEeeCCCcc-cHHHHHH-HHHHHHHC-CCCCccceeEEEec
Confidence            6778999999999999999999986432       3799999875432 2233333 33455555 58999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..|++|||+. ++|.+++....+..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||+++.
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~  152 (261)
T cd05068          73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARV  152 (261)
T ss_pred             CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence            999999999995 7888888665555789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  .......+..|+|||++..   ..++.++|+||||+++|||++ |+.||.+....+....+.. ......+
T Consensus       153 ~~~~~~~--~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~  226 (261)
T cd05068         153 IKEDIYE--AREGAKFPIKWTAPEAALY---NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ-GYRMPCP  226 (261)
T ss_pred             ccCCccc--ccCCCcCceeccCcccccc---CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCC
Confidence            6422111  1111123457999999864   367889999999999999999 9999998887776665542 3334456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ..++.++.+++.+||+.||.+||++.+++..|++
T Consensus       227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            7889999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.8e-37  Score=319.10  Aligned_cols=264  Identities=23%  Similarity=0.372  Sum_probs=207.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+..++|++.+.||+|+||.||+|.+.....+ .....||+|.+....... ...+.++ ..++..+ +|+||+.+++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~-~~~~~v~ik~~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~   78 (277)
T cd05036           2 EVPRDSITLLRALGHGAFGEVYEGLYRGRDGD-AVELQVAVKTLPESCSEQDESDFLME-ALIMSKF-NHQNIVRLIGVS   78 (277)
T ss_pred             CCCHHHcEeeeECCCCCCCcEEEEEEecCCCC-CCceeEEEEEcCCCCCHHHHHHHHHH-HHHHHhC-CCCCEeeEEEEE
Confidence            45668899999999999999999998752211 123589999886543332 2334443 3444454 689999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRG-----GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QL  188 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~-----~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~v  188 (632)
                      ...+..+++|||+. |+|.+++.....     ..+++..++.++.||+.||+|||+++++||||||+|||++.++   .+
T Consensus        79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~  158 (277)
T cd05036          79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA  158 (277)
T ss_pred             ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence            98899999999997 588888765431     2589999999999999999999999999999999999998765   69


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i  267 (632)
                      ||+|||+++........ ........+..|||||++.+   +.++.++|+|||||++|||++ |..||.+.+..+....+
T Consensus       159 kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~  234 (277)
T cd05036         159 KIADFGMARDIYRASYY-RKGGRAMLPIKWMPPEAFLD---GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV  234 (277)
T ss_pred             EeccCccccccCCccce-ecCCCCCccHhhCCHHHHhc---CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999998765322111 11112233568999999863   468999999999999999997 99999988877766554


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      . ....+..|..+|..+.+++.+||+.||++||++.++++.|+
T Consensus       235 ~-~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 T-GGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             H-cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            3 34556677889999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.9e-37  Score=318.54  Aligned_cols=253  Identities=23%  Similarity=0.417  Sum_probs=200.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||.+..... .....+..+. .+..+..+|+|++.+++++..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~iv~~~~~~~~~~   73 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTG------TIMAVKRIRATVNSQEQKRLLMDL-DISMRSVDCPYTVTFYGALFREG   73 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCC------cEEEEEEEecCCCcHHHHHHHHHH-HHHHHHcCCCCeeeeeEEEecCC
Confidence            47999999999999999999988665      4899999875432 2223333333 33345568999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..|++|||++|+|.+++...  ....+++..++.++.|++.||+|||++ +++||||||+|||++.++.+||+|||++..
T Consensus        74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~  153 (283)
T cd06617          74 DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGY  153 (283)
T ss_pred             cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence            99999999999988887653  235789999999999999999999998 999999999999999999999999999875


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCC-CCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhccCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~-g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~~~~~p~~  276 (632)
                      ....    .......|+..|+|||.+.+... ..++.++|+|||||++|||++|+.||.... ..+....+. ....+.+
T Consensus       154 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  228 (283)
T cd06617         154 LVDS----VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV-EEPSPQL  228 (283)
T ss_pred             cccc----cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-hcCCCCC
Confidence            4321    11123467899999999865322 457889999999999999999999997532 222233332 2333444


Q ss_pred             C-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 P-SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      | ..+|.++.++|.+||+.||.+||++.++++
T Consensus       229 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         229 PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            4 457999999999999999999999999886

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.2e-37  Score=319.73  Aligned_cols=270  Identities=22%  Similarity=0.337  Sum_probs=208.4

Q ss_pred             CCCcCC-CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDP-TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~-~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      +.++++ +.|++.++||.|+||.||+|.+..++      ..|++|.+..........+.++. .++..+ .|+|++.+++
T Consensus         5 ~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~e~-~~l~~l-~h~~i~~~~~   76 (292)
T cd06644           5 RRDLDPNEVWEIIGELGDGAFGKVYKAKNKETG------ALAAAKVIETKSEEELEDYMVEI-EILATC-NHPYIVKLLG   76 (292)
T ss_pred             hcccCcchhhhhhheecCCCCeEEEEEEECCCC------ceEEEEEeccCCHHHHHHHHHHH-HHHHhC-CCCcEeeeEE
Confidence            334444 56999999999999999999987655      48999998765544444444433 334444 6999999999


Q ss_pred             EEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          116 ISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .+..++..|+||||++|+.++.+.......+++..++.++.|++.+|+|||+++++||||||+|||++.++.++|+|||+
T Consensus        77 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~  156 (292)
T cd06644          77 AFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGV  156 (292)
T ss_pred             EEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCcc
Confidence            99999999999999996544444333345789999999999999999999999999999999999999999999999998


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-  272 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-  272 (632)
                      +......   ........++..|+|||++.+..  ...++.++|+|||||++|||++|..||...+..+....+..... 
T Consensus       157 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  233 (292)
T cd06644         157 SAKNVKT---LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP  233 (292)
T ss_pred             ceecccc---ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc
Confidence            8653221   11223346889999999985321  33578899999999999999999999988776555444432111 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      ....+..++.++.++|.+||+.||++||++.++++      ++++....|.
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~------~~~~~~~~~~  278 (292)
T cd06644         234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE------HPFVSSVTSN  278 (292)
T ss_pred             cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc------Cccccccccc
Confidence            12235678899999999999999999999999886      4555554444

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-37  Score=312.62  Aligned_cols=253  Identities=26%  Similarity=0.415  Sum_probs=204.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHH--HHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAK--VFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~--~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+......  ...  .....+..++..+ +|+||+.+++++.
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~------~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   74 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTG------RELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLR   74 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCC------cEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEc
Confidence            57999999999999999999987654      48999998643211  111  1122233344444 7999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++.++++|||++ ++|.+.+...  +.+++..+..++.|++.||.|||+.+|+||||||+||++++++.++|+|||+++
T Consensus        75 ~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~  152 (263)
T cd06625          75 DDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK  152 (263)
T ss_pred             cCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence            9999999999998 4777776543  468999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ................|+..|+|||++.+.   .++.++|+||||+++|||++|+.||...+..+....+......+.+|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
T cd06625         153 RLQTICSSGTGMKSVTGTPYWMSPEVISGE---GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLP  229 (263)
T ss_pred             eccccccccccccCCCcCccccCcceeccC---CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCC
Confidence            653322111111334678999999999754   47889999999999999999999998877666555555555566678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..++.++.++|.+||..||.+||++.+++.
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         230 SHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             ccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            889999999999999999999999999886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.2e-37  Score=328.86  Aligned_cols=251  Identities=21%  Similarity=0.367  Sum_probs=197.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.++||+|+||.||+|.+..++      ..+|+|.+...........+..+..++..+ +|+||+.+++++..
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   74 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSG------LIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS   74 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCC------cEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEE
Confidence            55689999999999999999999987655      479999887543322222233333455555 69999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ++.+|+||||+. |+|.+++..  .+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~  152 (333)
T cd06650          75 DGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (333)
T ss_pred             CCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcch
Confidence            999999999998 577777754  34789999999999999999999985 79999999999999999999999999986


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH----------
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV----------  267 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i----------  267 (632)
                      .....     ......||..|+|||++.+.   .++.++|+|||||++|||++|+.||...+..++...+          
T Consensus       153 ~~~~~-----~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  224 (333)
T cd06650         153 QLIDS-----MANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAE  224 (333)
T ss_pred             hhhhh-----ccccCCCCccccCHHHhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccc
Confidence            54221     12334689999999999743   5788999999999999999999999865543321110          


Q ss_pred             ---------------------------------HhhccCCCCCC-CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          268 ---------------------------------VIKKEKPCIPS-GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       268 ---------------------------------~~~~~~p~~p~-~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                       ......+.++. ..+.++.+||.+||++||++||++.|++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         225 SETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             cccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                                             01111222222 36789999999999999999999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2.6e-38  Score=314.21  Aligned_cols=251  Identities=20%  Similarity=0.320  Sum_probs=202.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhH-HHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCA-KVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|...++||+|.||.||+|++..+++      .||||.++..+. +.. ...+++. ..++.+ +|+||+.+.++|...
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~------~VAIKKIkl~~~kdGi~~talREI-K~Lqel-~h~nIi~LiD~F~~~   73 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGK------RVAIKKIKLGNAKDGINRTALREI-KLLQEL-KHPNIIELIDVFPHK   73 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCc------EEEEEEeeccccccCccHHHHHHH-HHHHHc-cCcchhhhhhhccCC
Confidence            478889999999999999999998774      899999975422 111 2223332 344444 699999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +.+.||+||++-+|...+.. +...++..++..|+.++++||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+.
T Consensus        74 ~~l~lVfEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~  152 (318)
T KOG0659|consen   74 SNLSLVFEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFG  152 (318)
T ss_pred             CceEEEEEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccC
Confidence            99999999999998877764 35689999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-----
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-----  275 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-----  275 (632)
                      ......   ...+-|.+|.|||.+.+.  ..|+..+|+||.||++.||+.|.+-|.|.+.-+....|...-..|.     
T Consensus       153 ~p~~~~---~~~V~TRWYRAPELLfGs--r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP  227 (318)
T KOG0659|consen  153 SPNRIQ---THQVVTRWYRAPELLFGS--RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP  227 (318)
T ss_pred             CCCccc---ccceeeeeccChHHhccc--hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence            543222   222569999999999876  3688999999999999999999999999886654444442111110     


Q ss_pred             -------------CC--------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 -------------IP--------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 -------------~p--------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                   +|        +..+.++.+|+.++|.+||.+|.++.|.++
T Consensus       228 ~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  228 EMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             cccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence                         11        235668899999999999999999999876

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.8e-37  Score=318.85  Aligned_cols=267  Identities=22%  Similarity=0.378  Sum_probs=211.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |..++|.+.+.||+|+||+||++.+..... ......+|+|.+..........+.++ ..++.++ .|++|+.+++++..
T Consensus         2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~   78 (288)
T cd05093           2 IKRHNIVLKRELGEGAFGKVFLAECYNLCP-EQDKILVAVKTLKDASDNARKDFHRE-AELLTNL-QHEHIVKFYGVCVE   78 (288)
T ss_pred             CchHHeeeccccCCcCCeeEEeeEeccCCC-CCcceEEEEEecCCcCHHHHHHHHHH-HHHHHhC-CCCCcceEEEEEec
Confidence            567899999999999999999998644211 12234699999876544434444443 3455555 68999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR-----------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ  187 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~-----------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~  187 (632)
                      ++.++++|||++ |+|.+++....           ...+++..++.++.|++.||+|||+++++||||||+|||+++++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~  158 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  158 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence            999999999998 67777776432           135899999999999999999999999999999999999999999


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS  266 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~  266 (632)
                      ++|+|||+++....... ........++..|+|||++.+.   .++.++|+|||||++|||++ |..||...+..+....
T Consensus       159 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~  234 (288)
T cd05093         159 VKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC  234 (288)
T ss_pred             EEeccCCccccccCCce-eecCCCCCccccccCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            99999999875432211 0111223457789999998643   57889999999999999998 9999998887776666


Q ss_pred             HHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       267 i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +.. ...+..+..++.++.+++.+||+.||.+||++.++++.|+.+..
T Consensus       235 i~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         235 ITQ-GRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             HHc-CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            653 33344567789999999999999999999999999999887764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=4.2e-37  Score=325.98  Aligned_cols=273  Identities=21%  Similarity=0.323  Sum_probs=214.3

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCc-ccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDF-DEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~-~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...+...+|++.+.||+|+||.||+|.+...+++. .....||+|.+..............+..++.++.+|+||+.+++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            44456678999999999999999999876433211 12347999988754333222223333456667768999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      .+..++.++++|||+. |+|.+++.+..              ...+++.+++.++.|++.||+|||+++|+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  165 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV  165 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence            9999999999999998 58888876532              23578899999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS  259 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~  259 (632)
                      |++.++.+||+|||+++........ .......++..|||||++..   ..++.++|+|||||++|||++ |..||.+.+
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~  241 (334)
T cd05100         166 LVTEDNVMKIADFGLARDVHNIDYY-KKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP  241 (334)
T ss_pred             EEcCCCcEEECCcccceeccccccc-ccccCCCcCceEcCHHHhcc---CCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999998765322111 11112234568999999864   357889999999999999998 899999888


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+....+. ....+..+..++.++.+++.+||+.+|++||++.++++.|+.+..
T Consensus       242 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         242 VEELFKLLK-EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            777766654 334455677889999999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=4.7e-37  Score=318.59  Aligned_cols=267  Identities=22%  Similarity=0.385  Sum_probs=211.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |...+|.+.+.||+|+||.||+|.+..... ......+++|.+..........+.++ ...+..+ +|+||+.+++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~   78 (291)
T cd05094           2 IKRRDIVLKRELGEGAFGKVFLAECYNLSP-TKDKMLVAVKALKDPTLAARKDFQRE-AELLTNL-QHEHIVKFYGVCGD   78 (291)
T ss_pred             CchHHeEEeeeecccCCCeEEEeEeeccCC-CCcceeeEEEecCCccHHHHHHHHHH-HHHHhcC-CCCCcceEEEEEcc
Confidence            456789999999999999999998654321 12335799999865444333444443 3445554 68999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE  184 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~  184 (632)
                      ++..++||||++ |+|.+++....              .+.+++..++.++.||+.||+|||+++|+||||||+|||++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~  158 (291)
T cd05094          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA  158 (291)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence            999999999997 67877776432              245899999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHH
Q 006772          185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI  263 (632)
Q Consensus       185 ~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei  263 (632)
                      ++.++|+|||+++....... ........++..|+|||++.+.   .++.++|+|||||++|||++ |..||...+..+.
T Consensus       159 ~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  234 (291)
T cd05094         159 NLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV  234 (291)
T ss_pred             CCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999875433211 1111233567899999998743   57889999999999999999 9999988887766


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ...+. ....+..+..+|.++.+++.+||+.||++||++.++++.|+.+..
T Consensus       235 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         235 IECIT-QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHHHh-CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            65543 334444567789999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.6e-37  Score=314.70  Aligned_cols=256  Identities=23%  Similarity=0.419  Sum_probs=204.4

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |..++|++.++||+|+||.||+|.+..+.       .||+|++...... ...+.+ +..++..+ +|+||+.+++.+. 
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-------~valK~~~~~~~~-~~~~~~-E~~~l~~l-~~~~i~~~~~~~~-   71 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMS-PEAFLQ-EAQVMKKL-RHEKLVQLYAVVS-   71 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCc-------eEEEEecccCccC-HHHHHH-HHHHHHhC-CCCCcceEEEEEC-
Confidence            56788999999999999999999875432       6999998753321 223333 33455554 6899999988764 


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..+++|||+. |+|.+++.......+++..++.++.|++.||+|||+++|+||||||+|||+++++.++|+|||++..
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~  151 (262)
T cd05071          72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  151 (262)
T ss_pred             CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceee
Confidence            456899999998 5888888765555789999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||++.   .+.++.++|+|||||++|||++ |..||.+....++...+.. ......+
T Consensus       152 ~~~~~~~--~~~~~~~~~~y~~PE~~~---~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~  225 (262)
T cd05071         152 IEDNEYT--ARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCP  225 (262)
T ss_pred             ccccccc--cccCCcccceecCHhHhc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-CCCCCCc
Confidence            5332111  111234677899999886   3468899999999999999999 8999988877776665543 2334446


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ..++..+.+++.+||+.||++||++.++++.|+..
T Consensus       226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            77899999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.5e-37  Score=315.86  Aligned_cols=254  Identities=21%  Similarity=0.357  Sum_probs=201.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      ..|++.+.||+|+||.||+|.+..++      +.||+|.+...... ...+ ..+..++..+.+|+|++.+.+.+...  
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~~aik~~~~~~~~-~~~~-~~e~~~l~~~~~h~~i~~~~~~~~~~~~   77 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTG------QLAAIKVMDVTGDE-EEEI-KQEINMLKKYSHHRNIATYYGAFIKKNP   77 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCC------cEEEEEEEEcCCcc-HHHH-HHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence            56889999999999999999987655      48999998654322 2233 33334556666899999999988753  


Q ss_pred             ----CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          121 ----GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       121 ----~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                          ...|++|||+. |+|.+++.......+++..+..++.|++.||+|||+++|+||||||+||++++++.++|+|||+
T Consensus        78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          78 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence                46899999998 5888877665556789999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +......   ........|+..|+|||++....  ...++.++|+|||||++|||++|..||...........+......
T Consensus       158 ~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~  234 (272)
T cd06637         158 SAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP  234 (272)
T ss_pred             ceecccc---cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCC
Confidence            8764321   11223457899999999986321  335788999999999999999999999876655444433322222


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+..++.++.+|+.+||..||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         235 RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            3334568899999999999999999999999886

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.2e-37  Score=316.30  Aligned_cols=254  Identities=21%  Similarity=0.396  Sum_probs=209.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||.|+||.||+|.+.. +      ..+|+|.+..........+..+ ..++..+ +|+|++.+++++...+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~------~~~~~k~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~~~   75 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-R------VRVAIKILKSDDLLKQQDFQKE-VQALKRL-RHKHLISLFAVCSVGE   75 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-C------CcEEEEeccccchhhHHHHHHH-HHHHhcC-CCcchhheeeeEecCC
Confidence            4679999999999999999999876 2      3799999876544333333333 3444444 6899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..+++|||++ |+|.+++....+..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++....
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148          76 PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence            9999999998 588888876556678999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      .....   .....++..|+|||++..   ..++.++|+||||+++|+|++ |..||.+.+..+.+..+. ....+..+..
T Consensus       156 ~~~~~---~~~~~~~~~~~~PE~~~~---~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~  228 (261)
T cd05148         156 EDVYL---SSDKKIPYKWTAPEAASH---GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPCPAK  228 (261)
T ss_pred             Ccccc---ccCCCCceEecCHHHHcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCCCCCC
Confidence            22111   112345778999999863   367889999999999999998 899999888777776665 3345556788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +++++.++|.+||+.||.+||++.++++.|+.
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         229 CPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            99999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2.1e-37  Score=331.08  Aligned_cols=247  Identities=20%  Similarity=0.221  Sum_probs=191.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||.+.....  .....+.++ ..++. ..+|+||+.+++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E-~~~l~-~l~h~niv~~~~~~~~   87 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLD------RNVAIKKLSRPFQNQTHAKRAYRE-LVLMK-CVNHKNIISLLNVFTP   87 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCC------ceEEEEEeCCcccChHHHHHHHHH-HHHHH-HhCCCchhceeeeeec
Confidence            478999999999999999999987654      4899999865322  222233332 23333 3479999999998764


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .      ...|+||||+++++.+.+..    .+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        88 ~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Df  163 (355)
T cd07874          88 QKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  163 (355)
T ss_pred             cccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeC
Confidence            3      35799999999988877642    5889999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-  272 (632)
                      |+++.....    .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||.+.+..+.+..+..... 
T Consensus       164 g~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (355)
T cd07874         164 GLARTAGTS----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  236 (355)
T ss_pred             cccccCCCc----cccCCccccCCccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            998754321    112335789999999998743   578899999999999999999999998765443332221100 


Q ss_pred             -------------------CC--------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 -------------------KP--------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 -------------------~p--------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                         .+                    ..+...+.++.+||.+||+.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence                               00                    011223567899999999999999999999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-39  Score=344.64  Aligned_cols=248  Identities=21%  Similarity=0.332  Sum_probs=209.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHH--HHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~--~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      -|.-++.||.|+||.||.|++..+.+      .||||.+.-......+......  ...+.+ ..|||++.+.+++..+.
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~e------vVAIKKMsySGKQs~EKWqDIlKEVrFL~~-l~HPntieYkgCyLre~   99 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDILKEVRFLRQ-LRHPNTIEYKGCYLREH   99 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccc------eeeeeeccccccccHHHHHHHHHHHHHHHh-ccCCCcccccceeeccc
Confidence            46667899999999999999998775      8999998654333333322222  122333 47999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..|||||||-||-.|++.-+ .+++.+.++..|+.+.+.||+|||+++.||||||..||||++.|.+||+|||.|.... 
T Consensus       100 TaWLVMEYClGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~-  177 (948)
T KOG0577|consen  100 TAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA-  177 (948)
T ss_pred             hHHHHHHHHhccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-
Confidence            99999999999988887655 3689999999999999999999999999999999999999999999999999886542 


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC-CCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP-SGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p-~~l  280 (632)
                            ...+++|||+|||||++.....|.|+-++||||||+++.|+...++|++.++....+..|. .+..|.++ ..+
T Consensus       178 ------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIA-QNesPtLqs~eW  250 (948)
T KOG0577|consen  178 ------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEW  250 (948)
T ss_pred             ------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHH-hcCCCCCCCchh
Confidence                  2356899999999999987778899999999999999999999999999988776665554 45666655 578


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+.+|+..||++-|.+|||.+++++
T Consensus       251 S~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  251 SDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            999999999999999999999998875

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=6.4e-37  Score=317.46  Aligned_cols=267  Identities=25%  Similarity=0.420  Sum_probs=217.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++.+...   .....+ ..+..++..+ +|+||+.+++++..
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~-~~e~~~l~~l-~h~~i~~~~~~~~~   72 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSG------KYYALKILSKAKIVKLKQVEHV-LNEKRILQSI-RHPFLVNLYGSFQD   72 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCC------CEEEEEEEEHHHhhhhhHHHHH-HHHHHHHHhC-CCCCccceeeEEEc
Confidence            47999999999999999999987654      4899999865321   111222 2333445555 59999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+|+||||+. |+|.+++...  +.+++..+..++.||+.||+|||+++|+|+||||+|||++.++.+||+|||+++.
T Consensus        73 ~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~  150 (290)
T cd05580          73 DSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKR  150 (290)
T ss_pred             CCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccc
Confidence            999999999995 6888877553  5799999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      ....      .....|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+.  ...+.+|.
T Consensus       151 ~~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~  219 (290)
T cd05580         151 VKGR------TYTLCGTPEYLAPEIILSK---GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL--EGKVRFPS  219 (290)
T ss_pred             cCCC------CCCCCCCccccChhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCccCCc
Confidence            5322      2345689999999998643   57889999999999999999999998888766666554  44566788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      .++..+.+++.+||+.||.+|+     +++|++.      ++++...+|..+....+..++.+
T Consensus       220 ~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~  276 (290)
T cd05580         220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN------HPWFAGIDWIALLQRKIEAPFIP  276 (290)
T ss_pred             cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc------CcccccCCHHHHhhccCCCCccC
Confidence            8999999999999999999999     6666654      67888888888776666555443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=7.5e-37  Score=315.20  Aligned_cols=260  Identities=20%  Similarity=0.291  Sum_probs=195.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEE--C
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVI--N  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--~  120 (632)
                      .|++.+.||+|+||.||++.......  ...+.||+|++...... ....+.+ +..++..+ +|+||+.+.+++..  +
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~i~~~~~~~~~~~~   80 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPAND--GTGEMVAVKTLKRECGQQNTSGWKK-EINILKTL-YHENIVKYKGCCSEQGG   80 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccC--CCCceEEEEEeccccChHHHHHHHH-HHHHHHhC-CCCCEeeEEEEEecCCC
Confidence            35999999999999999987543221  23458999998754322 2233333 33455555 79999999988765  3


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ..++++|||+. |+|.+++..   ..+++..++.++.|++.||+|||+++|+||||||+|||+++++.++|+|||+++..
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence            46899999998 567666643   36999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH--H------------HHH
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE--E------------IYH  265 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~--e------------i~~  265 (632)
                      ..............++..|+|||.+..   ..++.++|+|||||++|||++|..||......  +            ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd05080         158 PEGHEYYRVREDGDSPVFWYAVECLKE---NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI  234 (283)
T ss_pred             CCcchhhccCCCCCCCceeeCHhHhcc---cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence            322111111112245678999999863   36788999999999999999999998653211  0            011


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ........+..+..++.++.+++.+||+.||++||+++++++.|+.+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            111122333456778999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=6e-37  Score=311.71  Aligned_cols=256  Identities=22%  Similarity=0.399  Sum_probs=206.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +|..++|++.++||+|+||.||+|....+       +.||+|.+...... ...+.++ ..++..+ +|+|++.+++++ 
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~-------~~~a~K~~~~~~~~-~~~~~~E-~~~l~~l-~h~~i~~~~~~~-   70 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGH-------TKVAIKSLKQGSMS-PEAFLAE-ANLMKQL-QHPRLVRLYAVV-   70 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCC-------ceEEEEEecCCCCc-HHHHHHH-HHHHHhc-CCcCeeeEEEEE-
Confidence            56778999999999999999999986532       47999998754332 2333333 3445554 689999998876 


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..+++|||+. |+|.+++....+..+++.+++.++.|++.||+|||+++++||||||+||++++++.++|+|||++.
T Consensus        71 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  150 (260)
T cd05067          71 TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLAR  150 (260)
T ss_pred             ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCccee
Confidence            4567899999997 688888876656689999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      ........  ......++..|+|||++..   +.++.++|+||||+++|||++ |+.||.+.+..+....+. .......
T Consensus       151 ~~~~~~~~--~~~~~~~~~~y~~pe~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~  224 (260)
T cd05067         151 LIEDNEYT--AREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE-RGYRMPR  224 (260)
T ss_pred             ecCCCCcc--cccCCcccccccCHHHhcc---CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-cCCCCCC
Confidence            65322111  1122345778999999863   357889999999999999999 999999887766655543 2334456


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +..++.++.+++.+||+.||++||++++++..|+.
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         225 PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            77889999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=8.7e-37  Score=308.29  Aligned_cols=249  Identities=25%  Similarity=0.428  Sum_probs=204.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC--chhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~--~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|.+.+.||+|+||.||+|.+..++      ..|++|.+...  .......+.++. .++..+ +|+|++.+++.+..++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~~~   72 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADK------RVYAMKQIDLSKMNRREREEAIDEA-RVLAKL-DSSYIIRYYESFLDKG   72 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCC------cEEEEEEeehhhCCHHHHHHHHHHH-HHHHhc-CCCCeehheeeeccCC
Confidence            5889999999999999999987655      48999998643  222233333333 344444 7999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|++|||++ ++|.+++.......+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++...
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~  152 (256)
T cd08529          73 KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS  152 (256)
T ss_pred             EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceecc
Confidence            9999999997 588887776555689999999999999999999999999999999999999999999999999988654


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ...   .......|++.|+|||++.+   +.++.++|+|||||++|||++|+.||...+..+....+.. ...+.++..+
T Consensus       153 ~~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~  225 (256)
T cd08529         153 DNT---NFANTIVGTPYYLSPELCED---KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR-GVFPPVSQMY  225 (256)
T ss_pred             Ccc---chhhccccCccccCHHHhcC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-CCCCCCcccc
Confidence            321   11223468899999999874   3578899999999999999999999998887666555543 3445566788


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++.+++.+||+.+|++||++.++++
T Consensus       226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         226 SQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            999999999999999999999999886

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-37  Score=333.45  Aligned_cols=250  Identities=25%  Similarity=0.416  Sum_probs=214.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .+.|++.+.||+|.||.||++.++.++      +.+|+|++.+.....  .......+..+++.+..||||+.+++++++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg------~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~  107 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTG------KEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED  107 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCC------ceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence            367999999999999999999998875      489999997754322  224556667888888889999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC----CcEEEEecC
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH----DQLVLGDFG  194 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~----g~vkL~DFG  194 (632)
                      ...+++|||++. |.|.+.+...   .+++.++..++.|++.++.|||+.||+||||||+|+|+...    +.+|++|||
T Consensus       108 ~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  108 PDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             CCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            999999999999 6888988775   39999999999999999999999999999999999999743    479999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +|+....    .......+||+.|+|||++..   .+|+..+|+||+|+++|.|++|.+||.+.+..+.+..+.......
T Consensus       185 la~~~~~----~~~~~~~~Gtp~y~APEvl~~---~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f  257 (382)
T KOG0032|consen  185 LAKFIKP----GERLHTIVGTPEYVAPEVLGG---RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDF  257 (382)
T ss_pred             CceEccC----CceEeeecCCccccCchhhcC---CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCC
Confidence            9987643    234566799999999999974   478999999999999999999999999999888888777544332


Q ss_pred             CCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+  +.++..+.++|.+||..||..|+++.++|+
T Consensus       258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            222  567999999999999999999999999886

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=6e-37  Score=312.19  Aligned_cols=257  Identities=19%  Similarity=0.402  Sum_probs=201.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.+.||+|+||.||+|++..++      +.||||.+....   ......+.++ ..++..+ +|+|++.+++.+..
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~   73 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDR------KPVALKKVQIFEMMDAKARQDCVKE-IDLLKQL-NHPNVIKYLDSFIE   73 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCC------CEEEEEEeeccccCCHHHHHHHHHH-HHHHHhC-CCcceeeeeeeEEE
Confidence            58999999999999999999987655      489999876422   1222223333 3444444 78999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+..+++|||++ |+|.+++....  ...+++..++.++.|++.||+|||+++++|+||||+|||++.++.++|+|||++
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~  153 (267)
T cd08228          74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccc
Confidence            999999999999 57777665432  346899999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhccCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--VEEIYHSVVIKKEKP  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--~~ei~~~i~~~~~~p  274 (632)
                      .......   .......|++.|+|||.+.+.   .++.++|+||||+++|||++|..||....  ..+....+......+
T Consensus       154 ~~~~~~~---~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T cd08228         154 RFFSSKT---TAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP  227 (267)
T ss_pred             eeccchh---HHHhcCCCCccccChhhhccC---CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC
Confidence            7653221   111234688999999998643   57889999999999999999999997653  234444333222222


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..+...+..+.++|.+||+.||++||++.++++.|+.++
T Consensus       228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            223467889999999999999999999999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=4.8e-37  Score=329.59  Aligned_cols=247  Identities=21%  Similarity=0.224  Sum_probs=193.1

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.....  .....+.++ ..++.. .+|+||+.+++++..
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E-~~~l~~-l~h~~ii~~~~~~~~   94 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILE------RNVAIKKLSRPFQNQTHAKRAYRE-LVLMKC-VNHKNIIGLLNVFTP   94 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCC------cEEEEEEeCccccCchhHHHHHHH-HHHHHh-cCCCCccccceeecc
Confidence            578999999999999999999987655      4899999865321  222233332 233443 479999999887754


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .      ..+|+||||+++++.+.+..    .+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Df  170 (364)
T cd07875          95 QKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  170 (364)
T ss_pred             cccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeC
Confidence            3      45899999999998887743    5889999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++.....    .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||.+.+..+.+..+......
T Consensus       171 G~a~~~~~~----~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  243 (364)
T cd07875         171 GLARTAGTS----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT  243 (364)
T ss_pred             CCccccCCC----CcccCCcccCCcCCHHHHhCC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            999764321    112335689999999999743   6888999999999999999999999987766554444321111


Q ss_pred             --------------------CCC--------------------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 --------------------PCI--------------------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 --------------------p~~--------------------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          +.+                    ....+.++.+||.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                                100                    0113467899999999999999999999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.4e-38  Score=327.95  Aligned_cols=247  Identities=21%  Similarity=0.366  Sum_probs=210.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHH--HHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK--VFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .+|++.+.||.|+||+|-+|+.+.++      +.||||.+++.+....+  ..++++.++++.+ +||||+.++.+|...
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sg------R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENk  125 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSG------REVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENK  125 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCC------cEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCC
Confidence            57999999999999999999987665      69999999875433323  3345555666655 799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+.|||||.. |.|+|++.+.  +.+++.+++.+++||..|+.|+|.++++|||||.+|||||+++++||+|||++-++
T Consensus       126 dKIvivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly  203 (668)
T KOG0611|consen  126 DKIVIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLY  203 (668)
T ss_pred             ceEEEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhh
Confidence            99999999997 7999999764  68999999999999999999999999999999999999999999999999999776


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCC-CcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPI-SFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~-t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      ...    .-..++||+|-|.+||++.+.   +| ...+|.||||++||-+..|..||.|.+...+..+|..+.-+   .+
T Consensus       204 ~~~----kfLqTFCGSPLYASPEIvNG~---PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr---EP  273 (668)
T KOG0611|consen  204 ADK----KFLQTFCGSPLYASPEIVNGT---PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR---EP  273 (668)
T ss_pred             ccc----cHHHHhcCCcccCCccccCCC---CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc---CC
Confidence            432    234678999999999999865   34 47899999999999999999999999988887777643322   24


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      .-|.++.-||+.||..||++|.|+.+|...
T Consensus       274 ~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  274 ETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            566788999999999999999999998863

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=4.2e-37  Score=313.15  Aligned_cols=253  Identities=19%  Similarity=0.340  Sum_probs=203.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.+.||+|+||.||+|.+...       ..+|+|.+..... ....+.++. .++..+ +|+||+.+++++..
T Consensus         1 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~-------~~~aik~~~~~~~-~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~   70 (256)
T cd05113           1 IDPKDLTFLKELGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSM-SEDEFIEEA-KVMMKL-SHEKLVQLYGVCTK   70 (256)
T ss_pred             CChHHeEEeeEecCcccceEEEEEecCC-------CcEEEEEcCCCcc-cHHHHHHHH-HHHhcC-CCCCeeeEEEEEcc
Confidence            5678999999999999999999986532       2699998865332 223344433 344444 69999999999998


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..+++|||+. |+|.+++... ...+++..++.++.|++.||+|||+++++|+||||+|||++.++.+||+|||+++.
T Consensus        71 ~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~  149 (256)
T cd05113          71 QRPIYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRY  149 (256)
T ss_pred             CCCcEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCcccee
Confidence            889999999998 5677776543 34789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||++.+   +.++.++|+|||||++|||++ |..||...+..+....+.. ...+..+
T Consensus       150 ~~~~~~~--~~~~~~~~~~y~~pe~~~~---~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  223 (256)
T cd05113         150 VLDDEYT--SSVGSKFPVRWSPPEVLLY---SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ-GLRLYRP  223 (256)
T ss_pred             cCCCcee--ecCCCccChhhCCHHHHhc---CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc-CCCCCCC
Confidence            5332111  1112235678999999863   357889999999999999998 9999988777666666543 3444456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ...+..+.+++.+||+.||.+||++.+|++.|
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence            77899999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-38  Score=315.16  Aligned_cols=260  Identities=25%  Similarity=0.458  Sum_probs=212.1

Q ss_pred             CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           35 QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        35 ~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      ......++++++++..||.|+.|.||+++++.++      +..|||.+.+... +..++++... .++.+...+|.|++.
T Consensus        84 g~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~------~iiAVK~M~rt~Nkee~kRILmDl-dvv~~s~dcpyIV~c  156 (391)
T KOG0983|consen   84 GQRYQADINDLENLGDLGSGTCGQVWKMRFRSTG------HIIAVKQMRRTGNKEENKRILMDL-DVVLKSHDCPYIVQC  156 (391)
T ss_pred             CcccccChHHhhhHHhhcCCCccceEEEEEcccc------eEEEEEeecccCCHHHHHHHHHhh-hHHhhccCCCeeeee
Confidence            3344567888999999999999999999998876      4899999976543 3333333333 344556679999999


Q ss_pred             eEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      +|+|..+..++|.||.|.--.. .+.....+++++.-+=++...++.||.||-. ++|+|||+||+|||+|+.|++||||
T Consensus       157 ~GyFi~n~dV~IcMelMs~C~e-kLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCD  235 (391)
T KOG0983|consen  157 FGYFITNTDVFICMELMSTCAE-KLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCD  235 (391)
T ss_pred             eeEEeeCchHHHHHHHHHHHHH-HHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeec
Confidence            9999999999999999974333 3433445689998888999999999999997 5899999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKK  271 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~  271 (632)
                      ||++-++...    ...+...|.+.|||||.+..+....|+.++||||||++|+|+.||+.||.+.+.+ +.+..+. ..
T Consensus       236 FGIsGrlvdS----kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl-n~  310 (391)
T KOG0983|consen  236 FGISGRLVDS----KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL-NE  310 (391)
T ss_pred             ccccceeecc----cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH-hc
Confidence            9998765432    2223346899999999999876778999999999999999999999999997654 4454554 46


Q ss_pred             cCCCCCC--CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPS--GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~--~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++|.+|.  ..++++.+++..||.+|+.+||.+.++++
T Consensus       311 ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  311 EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            6677774  47999999999999999999999999886

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=344.39  Aligned_cols=282  Identities=23%  Similarity=0.271  Sum_probs=240.5

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ...+..++++.+..||-|+||.|-++..+...      ..+|+|++++..  ....++....+..++..+. .+.|++++
T Consensus       414 ~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~------~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLY  486 (732)
T KOG0614|consen  414 FAQVKLSDLKRIATLGVGGFGRVELVKVNSQK------ATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLY  486 (732)
T ss_pred             hcccchhhhhhhhhcccCccceEEEEEecccc------hHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHH
Confidence            34556789999999999999999999876543      258999987632  2333444444556666664 89999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      -.|.++.++|+.||-|- |.+...+.  .++.|+..++++|+..+++|++|||++|||+|||||+|+|||.+|.+||.||
T Consensus       487 rTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDF  564 (732)
T KOG0614|consen  487 RTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDF  564 (732)
T ss_pred             HHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeeh
Confidence            99999999999999997 56666654  3479999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+|+.+...    ..+.++||||.|.|||++...   ..+.++|.||||+++||+|+|.+||.+.++..+|..|..+-..
T Consensus       565 GFAKki~~g----~KTwTFcGTpEYVAPEIILnK---GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~  637 (732)
T KOG0614|consen  565 GFAKKIGSG----RKTWTFCGTPEYVAPEIILNK---GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK  637 (732)
T ss_pred             hhHHHhccC----CceeeecCCcccccchhhhcc---CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh
Confidence            999986432    344678999999999999854   6788999999999999999999999999999999999988888


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCCC
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYT  340 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  340 (632)
                      ..+|..++....+||+++...+|.+|..     +.+|.+      |.+|.+.+|+.+.++.+.+|+.++..+
T Consensus       638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk------H~Wf~gfdweglr~~~L~pPi~~~va~  703 (732)
T KOG0614|consen  638 IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK------HRWFEGFDWEGLRSRTLPPPIIPSVAN  703 (732)
T ss_pred             hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh------hhhhhcCChhhhhhccCCCCccccCCC
Confidence            8999999999999999999999999986     455554      678999999999999999998776544

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.3e-37  Score=315.67  Aligned_cols=254  Identities=22%  Similarity=0.299  Sum_probs=198.0

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++..........+. .+..++.. ..|+||+.+++.+..++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~------~~~aik~~~~~~~~~~~~~~-~e~~~l~~-~~h~~ii~~~~~~~~~~   79 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTG------ELAAVKIIKLEPGDDFSLIQ-QEIFMVKE-CKHCNIVAYFGSYLSRE   79 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCC------eEEEEEEEecCccchHHHHH-HHHHHHHh-cCCCCeeeeeEEEEeCC
Confidence            468999999999999999999987654      48999998654333222222 23334444 47899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+||||++ |+|.+.+..  .+.+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||++....
T Consensus        80 ~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646          80 KLWICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            9999999998 467776643  3578999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC---CC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC---IP  277 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~---~p  277 (632)
                      ...   .......|+..|+|||.+.......++.++|+|||||++|||++|..||...++.+....+......+.   .+
T Consensus       158 ~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd06646         158 ATI---AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDK  234 (267)
T ss_pred             ccc---cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccc
Confidence            211   112234688999999998644345678899999999999999999999976654433222211111111   12


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      ..++..+.++|++||..||++||+++++++.
T Consensus       235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         235 TKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             cccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            3578999999999999999999999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=6.9e-37  Score=312.00  Aligned_cols=251  Identities=17%  Similarity=0.317  Sum_probs=196.0

Q ss_pred             EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEec
Q 006772           50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKF  129 (632)
Q Consensus        50 ~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy  129 (632)
                      .||+|+||.||+|.++...    ....||+|++.............++..++.++ +|+||+.+.+++. ....++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~----~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~-~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRK----KQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCE-AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCC----CceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEc-CCCeEEEEEe
Confidence            4899999999999876432    12469999987654333333333334455555 7899999999875 4578999999


Q ss_pred             CC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCc
Q 006772          130 YE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD  208 (632)
Q Consensus       130 ~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~  208 (632)
                      ++ |+|.+++.. ....+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||+++...........
T Consensus        76 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  154 (257)
T cd05115          76 ASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA  154 (257)
T ss_pred             CCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence            98 566666643 3457999999999999999999999999999999999999999999999999998754322111111


Q ss_pred             cccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006772          209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV  287 (632)
Q Consensus       209 ~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~L  287 (632)
                      .....++..|+|||++..   ..++.++|+|||||++|||++ |..||.+....+....+. ...++..|..+++++.++
T Consensus       155 ~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l  230 (257)
T cd05115         155 RSAGKWPLKWYAPECINF---RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-QGKRLDCPAECPPEMYAL  230 (257)
T ss_pred             cCCCCCCcccCCHHHHcc---CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-CCCCCCCCCCCCHHHHHH
Confidence            111233578999999863   357889999999999999996 999999887776655443 445666788899999999


Q ss_pred             HHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          288 IIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       288 I~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      |.+||..||++||++.+|.+.|+.
T Consensus       231 i~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         231 MKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHhh
Confidence            999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=6.3e-37  Score=315.94  Aligned_cols=263  Identities=24%  Similarity=0.414  Sum_probs=208.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.++||+|+||.||+|....... ......+|+|.+..........+.++. .++..+ .|+||+.+++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~   78 (280)
T cd05092           2 IKRRDIVLKWELGEGAFGKVFLAECHNLLP-EQDKMLVAVKALKEASESARQDFQREA-ELLTVL-QHQHIVRFYGVCTE   78 (280)
T ss_pred             CChHhceeccccCCccCCeEEEeEEecCCC-CCCceEEEEEecCcCCHHHHHHHHHHH-HHHhcC-CCCCCceEEEEEec
Confidence            567899999999999999999998643211 123357999998765544444444433 445555 78999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRG-------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH  185 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~-------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~  185 (632)
                      ++..+++|||++ |+|.+++.....             ..+++..++.++.||+.||+|||+++++||||||+|||++++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~  158 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG  158 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence            999999999998 678877765321             358899999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHH
Q 006772          186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY  264 (632)
Q Consensus       186 g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~  264 (632)
                      +.+||+|||+++........ .......+++.|+|||++.+   ..++.++|+|||||++|||++ |..||......+..
T Consensus       159 ~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  234 (280)
T cd05092         159 LVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILY---RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI  234 (280)
T ss_pred             CCEEECCCCceeEcCCCcee-ecCCCccccccccCHHHhcc---CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH
Confidence            99999999998765322110 11122345788999999864   358899999999999999998 99999887766665


Q ss_pred             HHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       265 ~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      ..+. ....+..+..+|+.+.+++.+||+.||.+||++.+|++.|+
T Consensus       235 ~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         235 ECIT-QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHH-cCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            5554 33445567789999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=4.9e-37  Score=310.59  Aligned_cols=248  Identities=23%  Similarity=0.373  Sum_probs=195.6

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||+|.+..++      +.||+|.+...... ....+.+ +..++..+ .|+||+.+++++..++..|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   72 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADN------TPVAVKSCRETLPPDLKAKFLQ-EARILKQY-SHPNIVRLIGVCTQKQPIYIVM   72 (252)
T ss_pred             CccCcccCccEEEEEEecCC------ceEEEEecCccCCHHHHHHHHH-HHHHHHhC-CCCCcceEEEEEcCCCCeEEEE
Confidence            46999999999999987655      48999987654322 2233333 33455554 7999999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||+. ++|.+++.. ....+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++........ .
T Consensus        73 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~  150 (252)
T cd05084          73 ELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-A  150 (252)
T ss_pred             eeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc-c
Confidence            9998 467766643 345689999999999999999999999999999999999999999999999999875422111 1


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......++..|+|||.+.+   +.++.++|+|||||++|||++ |..||...+.......+. .......+..++..+.
T Consensus       151 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  226 (252)
T cd05084         151 STGGMKQIPVKWTAPEALNY---GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPCPELCPDAVY  226 (252)
T ss_pred             ccCCCCCCceeecCchhhcC---CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCcccCCHHHH
Confidence            11111123467999999863   457889999999999999998 999998777665554443 3345566788899999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          286 NVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      +++.+||+.||++||++.++++.|+
T Consensus       227 ~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         227 RLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHh
Confidence            9999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=5.7e-37  Score=311.71  Aligned_cols=249  Identities=20%  Similarity=0.312  Sum_probs=195.1

Q ss_pred             EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        50 ~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      .||+|+||.||+|.++...    ....+|+|++......  ..+.+.++ ..++.. ..|+||+.+++++. ++..++||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~e-~~~l~~-l~h~~i~~~~~~~~-~~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKK----SEKTVAVKILKNDNNDPALKDELLRE-ANVMQQ-LDNPYIVRMIGICE-AESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCC----CceEEEEEEccCCCCcHHHHHHHHHH-HHHHHh-CCCCCcceEEEEEc-CCCcEEEE
Confidence            6899999999999764322    2358999998654322  22233333 234444 47999999998875 45678999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||++ |+|.+++..  ...+++..++.++.|++.||+|||+++|+||||||.|||++.++.+||+|||+++.........
T Consensus        75 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~  152 (257)
T cd05116          75 ELAELGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY  152 (257)
T ss_pred             ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence            9998 567777754  3478999999999999999999999999999999999999999999999999987653321111


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......++..|+|||.+..   +.++.++|+|||||++|||++ |..||...+..++...+. ....+..|..+++++.
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~  228 (257)
T cd05116         153 KAKTHGKWPVKWYAPECMNY---YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-SGERMECPQRCPPEMY  228 (257)
T ss_pred             eecCCCCCCccccCHhHhcc---CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHHH
Confidence            11122234679999999863   467889999999999999998 999999887776666554 3455667888999999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          286 NVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ++|.+||+.||++||++.+|.+.|+.
T Consensus       229 ~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         229 DLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHhccCchhCcCHHHHHHHHhc
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=7.6e-37  Score=315.45  Aligned_cols=264  Identities=22%  Similarity=0.325  Sum_probs=204.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+..++|++.+.||+|+||.||+|.+..++..  ....+++|.+...... ...++..+. ..+. ...|+||+.+++++
T Consensus         3 ~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~-~~l~-~l~h~~iv~~~~~~   78 (279)
T cd05111           3 ILKETELRKLKLLGSGVFGTVHKGIWIPEGDS--IKIPVAIKTIQDRSGRQTFQEITDHM-LAMG-SLDHAYIVRLLGIC   78 (279)
T ss_pred             cCCHhhceeccccCccCCcceEEEEEcCCCCc--eeeEEEEeecccccchHHHHHHHHHH-HHHh-cCCCCCcceEEEEE
Confidence            34567899999999999999999998655431  1125788887533221 112222221 2223 34789999999986


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      . +...+++|||+. |+|.+++... .+.+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||++
T Consensus        79 ~-~~~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~  156 (279)
T cd05111          79 P-GASLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVA  156 (279)
T ss_pred             C-CCccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccc
Confidence            5 456788999998 7888887653 357899999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +....... ........++..|+|||++..   +.++.++|+|||||++|||++ |..||.+....++... ......+.
T Consensus       157 ~~~~~~~~-~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~  231 (279)
T cd05111         157 DLLYPDDK-KYFYSEHKTPIKWMALESILF---GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-LEKGERLA  231 (279)
T ss_pred             eeccCCCc-ccccCCCCCcccccCHHHhcc---CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHCCCcCC
Confidence            86533211 111223456789999999863   468899999999999999998 9999998876655443 34445555


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+..++.++.+++.+||..||++||++.|+++.|..+.
T Consensus       232 ~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         232 QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            66778999999999999999999999999999887755

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.1e-37  Score=333.49  Aligned_cols=250  Identities=22%  Similarity=0.300  Sum_probs=196.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      +.||||.+.....  .....+.++ ..++..+ +|+||+.+++++...+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E-~~~l~~l-~h~niv~~~~~~~~~~   72 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDG------KRVALKKMPNVFQNLVSCKRVFRE-LKMLCFF-KHDNVLSALDILQPPH   72 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCC------CEEEEEeccccccchHHHHHHHHH-HHHHHhC-CCCCcCCHhheecCCC
Confidence            5889999999999999999986554      4899999865321  222333333 3444444 7999999999988766


Q ss_pred             -----EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          122 -----KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       122 -----~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                           .+|+||||+.++|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~~lv~e~~~~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a  150 (372)
T cd07853          73 IDPFEEIYVVTELMQSDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA  150 (372)
T ss_pred             ccccceEEEEeeccccCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccce
Confidence                 7999999999988887754  357999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh------
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK------  270 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~------  270 (632)
                      +......  ........+|+.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+..+....+...      
T Consensus       151 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~  226 (372)
T cd07853         151 RVEEPDE--SKHMTQEVVTQYYRAPEILMGS--RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL  226 (372)
T ss_pred             eecccCc--cccCCCCCcCCCcCCHHHHcCC--CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            7643221  1122334679999999998753  24788999999999999999999999987765544433211      


Q ss_pred             -----------------ccCC-------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 -----------------KEKP-------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 -----------------~~~p-------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                       ...+       ......++++.+||.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                             0011       122456889999999999999999999999886

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=7.2e-37  Score=316.64  Aligned_cols=265  Identities=22%  Similarity=0.356  Sum_probs=205.7

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCC----------cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCce
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADD----------FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV  110 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~----------~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I  110 (632)
                      ..++|++.+.||+|+||.||+|.+...+..          ......||+|.+..............+..++..+ +|+|+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i   81 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNI   81 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCE
Confidence            457899999999999999999988654421          1123579999987654332233333334455555 68999


Q ss_pred             eEeeEEEEECCEEEEEEecCC-CCHHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          111 CWLHGISVINGKICIAMKFYE-GSVGDRIAQQR---------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       111 ~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~---------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      +.+++++..++..+++|||+. ++|.+++....         ...+++..++.++.|++.||+|||+++|+||||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni  161 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC  161 (296)
T ss_pred             eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence            999999999999999999998 57777775542         12689999999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh--CCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT--GIQPWFGK  258 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt--G~~PF~~~  258 (632)
                      |++.++.++|+|||+++........ .......+++.|||||++..   +.++.++|+|||||++|||++  +..||...
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~  237 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNLYSSDYY-RVQGRAPLPIRWMAWESVLL---GKFTTKSDVWAFGVTLWEILTLCREQPYEHL  237 (296)
T ss_pred             eecCCCceEEccccceeecccCcce-eecCcCCCCceecCHHHhhc---CCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence            9999999999999998765332211 11223456789999999864   368899999999999999998  78899887


Q ss_pred             CHHHHHHHHHhh------ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          259 SVEEIYHSVVIK------KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       259 ~~~ei~~~i~~~------~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      +..++...+...      ......+..+|.++.+++.+||+.||.+||++.+|++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            766655544322      1112334567899999999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=4.9e-37  Score=320.03  Aligned_cols=253  Identities=20%  Similarity=0.300  Sum_probs=199.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.++||+|+||.||+|.+..++      ..||+|.+.............++..++..+ +|+||+.+++++..++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~   77 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTD------NLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEK   77 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCC------cEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCC
Confidence            478999999999999999999987655      489999986543222222222333444444 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..|+||||+.++|.+.+... ...+++..+..++.|++.||+|||+++|+|+||||+|||++.++.++|+|||++.....
T Consensus        78 ~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  156 (301)
T cd07873          78 SLTLVFEYLDKDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI  156 (301)
T ss_pred             eEEEEEeccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence            99999999999988887653 35789999999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc---------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE---------  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~---------  272 (632)
                      .   ........+++.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+..+....+.....         
T Consensus       157 ~---~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (301)
T cd07873         157 P---TKTYSNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG  231 (301)
T ss_pred             C---CCcccccceeecccCcHHHhCC--CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence            1   1122234578999999998643  3477899999999999999999999998776554433321100         


Q ss_pred             --------CCCC-----------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 --------KPCI-----------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 --------~p~~-----------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                              ...+           ...+++++.+||.+||+.||.+|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                    0011           1357889999999999999999999999886

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=3e-38  Score=340.71  Aligned_cols=274  Identities=23%  Similarity=0.390  Sum_probs=225.3

Q ss_pred             cccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC-chhhHHHHHHHHHHHhhhccCC
Q 006772           29 VVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL-KEDCAKVFVNKFEELFPKFRES  107 (632)
Q Consensus        29 ~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~-~~~~~~~~~~~~~~il~~l~~h  107 (632)
                      -.+.|.-....|.++.+.+.++||+|.||+||.|.+..-.+  +..-.||||..+.. ..+..+.|+.+. .+++. -+|
T Consensus       375 ty~~P~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~k--ge~iaVAvKtCK~d~t~d~tekflqEa-~iMrn-fdH  450 (974)
T KOG4257|consen  375 TYSTPTVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEK--GERIAVAVKTCKTDCTPDDTEKFLQEA-SIMRN-FDH  450 (974)
T ss_pred             cccCCCCCcceeehhhccHHHhhcCCcccceeeeEeccccc--CcceeeeeehhccCCChhhHHHHHHHH-HHHHh-CCC
Confidence            46777777888999999999999999999999999876432  33357999998763 334445555543 44444 489


Q ss_pred             CceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          108 QSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       108 ~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      |||+++.|++.. ...+||||+++ |.|..++..++ ..++......|+.||+.||.|||++++|||||..+|||+....
T Consensus       451 phIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~  528 (974)
T KOG4257|consen  451 PHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ  528 (974)
T ss_pred             cchhheeeeeec-cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc
Confidence            999999999865 58999999999 89998887654 5899999999999999999999999999999999999999999


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH  265 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~  265 (632)
                      .+||+|||+++.+....+....  ...-.+.|||||.+.   ..++|.+||||-||+++||++. |..||.+....+...
T Consensus       529 CVKLaDFGLSR~~ed~~yYkaS--~~kLPIKWmaPESIN---fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~  603 (974)
T KOG4257|consen  529 CVKLADFGLSRYLEDDAYYKAS--RGKLPIKWMAPESIN---FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG  603 (974)
T ss_pred             eeeecccchhhhccccchhhcc--ccccceeecCccccc---hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE
Confidence            9999999999987544322211  112267899999986   5579999999999999999988 999999987666544


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+ ..+.+++.|+.||+.+..|+.+||++||.+||.+.+|...|..+..
T Consensus       604 ~i-EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  604 HI-ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             Ee-cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            44 4577888899999999999999999999999999999987766543

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=8.4e-37  Score=339.28  Aligned_cols=248  Identities=21%  Similarity=0.280  Sum_probs=187.5

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhh-----ccCCCceeEeeE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-----FRESQSVCWLHG  115 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~-----l~~h~~I~~l~~  115 (632)
                      ..++|++.+.||+|+||+||+|.+..++      +.||||+++..... ...... +..++..     ..++.+++.+..
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~------~~vAvK~i~~~~~~-~~~~~~-e~~~l~~l~~~~~~~~~~i~~i~~  198 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRK------EYCAVKIVRNVPKY-TRDAKI-EIQFMEKVRQADPADRFPLMKIQR  198 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCC------eEEEEEEEecchhh-HHHHHH-HHHHHHHHhhcCcccCcceeeeEE
Confidence            3478999999999999999999987655      48999999643221 111111 1122222     234566888888


Q ss_pred             EEEEC-CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCC-------
Q 006772          116 ISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHD-------  186 (632)
Q Consensus       116 ~~~~~-~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g-------  186 (632)
                      ++..+ +.+|||||++.++|.+++...  +.+++..++.++.||+.||+|||+ .+||||||||+|||++.++       
T Consensus       199 ~~~~~~~~~~iv~~~~g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        199 YFQNETGHMCIVMPKYGPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             EEEcCCceEEEEEeccCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccc
Confidence            77654 679999999999999988653  579999999999999999999998 5999999999999998766       


Q ss_pred             ---------cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC
Q 006772          187 ---------QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG  257 (632)
Q Consensus       187 ---------~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~  257 (632)
                               .+||+|||++....      ......+||+.|||||++.+.   .++.++|||||||++|||++|+.||.+
T Consensus       277 ~~~~~~~~~~vkl~DfG~~~~~~------~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGCCDER------HSRTAIVSTRHYRSPEVVLGL---GWMYSTDMWSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             ccccCCCCceEEECCCCccccCc------cccccccCCccccCcHHhhcC---CCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                     49999999875321      122346799999999999743   688999999999999999999999998


Q ss_pred             CCHHHHHHHHHhhccC-------------------------CCCC---------------CCCCHHHHHHHHHhhhcCcC
Q 006772          258 KSVEEIYHSVVIKKEK-------------------------PCIP---------------SGLPPAVENVIIGCFEYDLR  297 (632)
Q Consensus       258 ~~~~ei~~~i~~~~~~-------------------------p~~p---------------~~lp~~l~~LI~~cL~~DP~  297 (632)
                      .+..+....+......                         +...               ...++.+.+||.+||.+||+
T Consensus       348 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~  427 (467)
T PTZ00284        348 HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ  427 (467)
T ss_pred             CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence            7765443332211000                         0000               01135678999999999999


Q ss_pred             CCCCHHHHHH
Q 006772          298 NRPLMADILH  307 (632)
Q Consensus       298 ~RPs~~ell~  307 (632)
                      +||+++|+++
T Consensus       428 ~R~ta~e~L~  437 (467)
T PTZ00284        428 KRLNARQMTT  437 (467)
T ss_pred             hCCCHHHHhc
Confidence            9999999986

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=6.2e-37  Score=311.62  Aligned_cols=255  Identities=24%  Similarity=0.443  Sum_probs=204.5

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.++||+|+||.||+|.+...       ..||+|.+.+.... ...+.+ +..++.++ +|++++.+++++. 
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-------~~~~~k~~~~~~~~-~~~~~~-E~~~l~~l-~~~~i~~~~~~~~-   71 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNGN-------TKVAVKTLKPGTMS-PESFLE-EAQIMKKL-RHDKLVQLYAVVS-   71 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecCC-------ceeEEEEecCCCCC-HHHHHH-HHHHHHhc-CCCceEEEEeEEC-
Confidence            6778999999999999999999986533       36999998754332 233333 33455555 6899999988764 


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .+..+++|||+. |+|.+++.......+++..++.++.|++.||+|||+++|+||||||+|||+++++.++|+|||++..
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~  151 (260)
T cd05070          72 EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARL  151 (260)
T ss_pred             CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeee
Confidence            566899999998 5888887655456789999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......  .......++..|+|||++..   ..++.++|+||||+++|||++ |..||.+.+..+....+. ....+..+
T Consensus       152 ~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~  225 (260)
T cd05070         152 IEDNEY--TARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-RGYRMPCP  225 (260)
T ss_pred             ccCccc--ccccCCCCCccccChHHHhc---CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCC
Confidence            533211  11112235678999999863   468889999999999999999 999999887777666554 33455567


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ...+.++.+++.+||..||.+||++.++.+.|+.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            7889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.5e-37  Score=310.96  Aligned_cols=258  Identities=21%  Similarity=0.351  Sum_probs=201.6

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      |++.+.||+|+||.||+|.+....   .....||||.++....  .....+.++. ..+.. .+|+|++.+++++.....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~-~~l~~-l~h~~iv~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDD---GSQLKVAVKTMKLDIHTYSEIEEFLSEA-ACMKD-FDHPNVMKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCC---CCcceEEEEEeccCcCCHHHHHHHHHHH-HHHHh-CCCCCeeeEEeeeccCCc
Confidence            578899999999999999876533   1235799999875322  2223333333 34444 478999999988765443


Q ss_pred             ------EEEEEecCC-CCHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          123 ------ICIAMKFYE-GSVGDRIAQQR----GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       123 ------l~LVmEy~~-GsL~d~l~~~~----~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                            .+++|||++ |+|.+.+....    ...+++..++.++.|++.||+|||+++|+||||||+|||+++++.+||+
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  155 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVA  155 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEEC
Confidence                  799999998 57777664432    2468999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+++........ .......++..|+|||.+..   ..++.++|+|||||++|||++ |..||.+.+..+....+. .
T Consensus       156 dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~-~  230 (273)
T cd05035         156 DFGLSKKIYSGDYY-RQGRIAKMPVKWIAIESLAD---RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR-H  230 (273)
T ss_pred             Cccceeeccccccc-cccccccCCccccCHhhccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-c
Confidence            99999865332211 11112234678999999863   367889999999999999999 999998888777766554 3


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ...+..|..++.++.+++.+||+.||.+||++.++++.|+.+
T Consensus       231 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         231 GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            445567788999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=8.7e-37  Score=313.88  Aligned_cols=267  Identities=18%  Similarity=0.246  Sum_probs=209.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|+.++|++.+.||+|+||.||+|.+....  ......|++|.+..............+..++..+ .|+|++.+++++.
T Consensus         2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~--~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~   78 (280)
T cd05043           2 AISRDRVTLSDLLQEGTFGRIFYGILIDEK--PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCI   78 (280)
T ss_pred             ccchhheEEeeeecccCCceEEEEEEecCC--CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe
Confidence            367789999999999999999999987633  1223589999987543332233233333445555 8999999999876


Q ss_pred             E-CCEEEEEEecCC-CCHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          119 I-NGKICIAMKFYE-GSVGDRIAQQRG------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       119 ~-~~~l~LVmEy~~-GsL~d~l~~~~~------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      . +...+++++|+. |+|.+++.....      ..+++..++.++.|++.||+|||+++++||||||+|||+++++.+||
T Consensus        79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl  158 (280)
T cd05043          79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKI  158 (280)
T ss_pred             cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEE
Confidence            5 577899999998 688887765422      46899999999999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~  269 (632)
                      +|||+++.+...... .......++..|+|||++.+.   .++.++|+|||||++||+++ |+.||...+..++...+. 
T Consensus       159 ~d~g~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-  233 (280)
T cd05043         159 TDNALSRDLFPMDYH-CLGDNENRPVKWMALESLVNK---EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK-  233 (280)
T ss_pred             CCCCCcccccCCceE-EeCCCCCcchhccCHHHHhcC---CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH-
Confidence            999999765332111 011123457789999998643   57899999999999999999 999999887776655444 


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ....+..+..+|+++.+++.+||..||++||++.++++.|+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         234 DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            23344456678999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-37  Score=334.49  Aligned_cols=256  Identities=23%  Similarity=0.420  Sum_probs=195.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      ++|.-...||+|+||.||+|.....       ..||||.+.........+|.++. .++.++. |+|++.|.|+|.+.+ 
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-------~~vAVK~~~~~~~~~~~eF~~Ei-~~ls~l~-H~Nlv~LlGyC~e~~~  145 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSDG-------TVVAVKRLSSNSGQGEREFLNEV-EILSRLR-HPNLVKLLGYCLEGGE  145 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECCC-------CEEEEEEecCCCCcchhHHHHHH-HHHhcCC-CcCcccEEEEEecCCc
Confidence            5677778999999999999987543       47999988765433134455554 5556665 999999999999988 


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG---LLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~---IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..+||+|||. |+|.+.+.......++|..+++|+.++|.||+|||...   ||||||||+|||||++..+||+|||+|+
T Consensus       146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~  225 (361)
T KOG1187|consen  146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAK  225 (361)
T ss_pred             eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcc
Confidence            5999999998 89999887643338899999999999999999999854   9999999999999999999999999997


Q ss_pred             eccCCCCCCCccccc-cCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC---HHHHHH---HHHhh
Q 006772          198 LLLGRSLSDSDMALR-LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---VEEIYH---SVVIK  270 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~-~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~---~~ei~~---~i~~~  270 (632)
                      .....   ....... .||.+|+|||++.   .+..+.++||||||++|.|++||+.|.....   ...+..   .....
T Consensus       226 ~~~~~---~~~~~~~~~gt~gY~~PEy~~---~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~  299 (361)
T KOG1187|consen  226 LGPEG---DTSVSTTVMGTFGYLAPEYAS---TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE  299 (361)
T ss_pred             cCCcc---ccceeeecCCCCccCChhhhc---cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence            54321   1111222 7999999999996   4679999999999999999999998877432   111111   11111


Q ss_pred             -----ccCCCCC-CCCC-----HHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          271 -----KEKPCIP-SGLP-----PAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       271 -----~~~p~~p-~~lp-----~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                           -..+.+. ...+     ..+..+..+|++.+|.+||+|.++++.|+.+.
T Consensus       300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence                 1112222 2222     23667889999999999999999998885443

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.1e-36  Score=310.13  Aligned_cols=255  Identities=24%  Similarity=0.435  Sum_probs=203.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.+.||+|+||.||+|.+..+.       .+|+|.+..... ....+.+ +..++..+ .|++++.+++++. 
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~-------~~~lK~~~~~~~-~~~~~~~-E~~~l~~l-~h~~i~~~~~~~~-   71 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTT-------KVAIKTLKPGTM-MPEAFLQ-EAQIMKKL-RHDKLVPLYAVVS-   71 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCc-------eEEEEEcccCCc-cHHHHHH-HHHHHHhC-CCCCeeeEEEEEc-
Confidence            66788999999999999999999875432       699998865332 1223333 33444554 6899999988764 


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .+..+++|||+. |+|.+++.......+++..+..++.|++.||+|||+++++||||||+|||+++++.++|+|||+++.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~  151 (260)
T cd05069          72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARL  151 (260)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceE
Confidence            566899999998 5888888765555689999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||.+.+   ..++.++|+||||+++|||++ |..||.+....+....+.. ...+..+
T Consensus       152 ~~~~~~~--~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~  225 (260)
T cd05069         152 IEDNEYT--ARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-GYRMPCP  225 (260)
T ss_pred             ccCCccc--ccCCCccchhhCCHHHhcc---CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCC
Confidence            5332111  1112245678999998863   467889999999999999999 9999998877766655542 3344556


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ...+..+.+++.+||+.||++||+++++++.|+.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            7889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=6.9e-37  Score=314.70  Aligned_cols=252  Identities=19%  Similarity=0.220  Sum_probs=195.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +|++.+.||+|+||.||+|.+..++      ..||||.+...... ........+..++..+ .|+|++.+++++..++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   73 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTG------QIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESR   73 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCC------cEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCe
Confidence            5899999999999999999987655      48999998643221 1112222233444444 59999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +|+||||+.|++.+++..... ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||++.....
T Consensus        74 ~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  153 (285)
T cd07861          74 LYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI  153 (285)
T ss_pred             EEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence            999999999998888865433 6789999999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--------  273 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--------  273 (632)
                      .   ........+++.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+.......+......        
T Consensus       154 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
T cd07861         154 P---VRVYTHEVVTLWYRAPEVLLGS--PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG  228 (285)
T ss_pred             C---cccccCCcccccccChHHhcCC--CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence            1   1112234578999999988643  24688999999999999999999999877644322221110000        


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 -------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 -------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                         ......+++++.++|.+||+.||.+||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                               0012357899999999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=8.9e-37  Score=316.08  Aligned_cols=262  Identities=23%  Similarity=0.382  Sum_probs=206.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +|++.+.||+|+||.||+|.+..... ......+++|.+...... ....+.++. .++..+ .|+||+.+.+.+..++.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~E~-~~l~~l-~h~~iv~~~~~~~~~~~   77 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKG-RAGYTTVAVKMLKENASSSELRDLLSEF-NLLKQV-NHPHVIKLYGACSQDGP   77 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCC-CCcceeEEEEecCCCCCHHHHHHHHHHH-HHHhhC-CCCCEeeEEEEEecCCC
Confidence            48899999999999999998754332 123357999988654332 223333433 344444 78999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCe
Q 006772          123 ICIAMKFYE-GSVGDRIAQQR----------------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN  179 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~----------------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~N  179 (632)
                      .+++|||+. |+|.+++....                      ...+++..++.++.|++.||+|||+++|+||||||+|
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n  157 (290)
T cd05045          78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN  157 (290)
T ss_pred             cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence            999999998 67777765421                      1357889999999999999999999999999999999


Q ss_pred             EEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCC
Q 006772          180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGK  258 (632)
Q Consensus       180 ILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~  258 (632)
                      ||+++++.+||+|||+++........ .......++..|+|||++.+.   .++.++|+||||+++|||++ |..||.+.
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~  233 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFDH---IYTTQSDVWSFGVLLWEIVTLGGNPYPGI  233 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccch-hcccCCCCCccccCHHHHccC---CcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999998754322111 111223457789999998643   57899999999999999998 99999988


Q ss_pred             CHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+.++...+. .......+..++.++.+++.+||+.||++||++.++++.|+++.
T Consensus       234 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         234 APERLFNLLK-TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             CHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            8777665543 33445567889999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.3e-38  Score=323.55  Aligned_cols=246  Identities=23%  Similarity=0.341  Sum_probs=198.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--C
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--G  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--~  121 (632)
                      .|+-.+.+|+|+||.||+|....+.      ..||||........     .+.+-+++. ...||||+.+..+|...  .
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~------~~vAIKKv~~d~r~-----knrEl~im~-~l~HpNIV~L~~~f~~~~~~   92 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETE------EEVAIKKVLQDKRY-----KNRELQIMR-KLDHPNIVRLLYFFSSSTES   92 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCC------ceeEEEEecCCCCc-----CcHHHHHHH-hcCCcCeeeEEEEEEecCCC
Confidence            4888899999999999999988764      38999998765443     333334554 45899999998887643  2


Q ss_pred             ---EEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC-CcEEEEecCC
Q 006772          122 ---KICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-DQLVLGDFGI  195 (632)
Q Consensus       122 ---~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~-g~vkL~DFGl  195 (632)
                         .+.+||||++-+|.+.+.+.  .+.+++...++.|..||++||.|||+.+|+||||||+|+|+|.+ |.+||||||.
T Consensus        93 d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGS  172 (364)
T KOG0658|consen   93 DEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGS  172 (364)
T ss_pred             chhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCc
Confidence               45699999999999988753  34689999999999999999999999999999999999999965 8999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--  273 (632)
                      |+.+...    ....+...|..|.|||.+.+.  ..|+.+.||||.||++.||+-|++.|.|++..+.+..|+.--..  
T Consensus       173 AK~L~~~----epniSYicSRyYRaPELifga--~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt  246 (364)
T KOG0658|consen  173 AKVLVKG----EPNISYICSRYYRAPELIFGA--TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT  246 (364)
T ss_pred             ceeeccC----CCceeEEEeccccCHHHHcCc--cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC
Confidence            9987543    222345669999999999975  36999999999999999999999999998866544443310000  


Q ss_pred             ----------------C---------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ----------------P---------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ----------------p---------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                      |         -+...+++++.+|+.++|+++|.+|.++.|++.
T Consensus       247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  247 REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                            0         023467899999999999999999999988875

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1e-36  Score=309.22  Aligned_cols=250  Identities=24%  Similarity=0.413  Sum_probs=202.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE-
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV-  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~-  118 (632)
                      |+.++|++.+.||+|+||.||+|....        ..||+|.+.....  .+.+.++ ..++..+ .|++++.+++++. 
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~--------~~~~~k~~~~~~~--~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~   70 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCIKNDAT--AQAFLAE-ASVMTQL-RHSNLVQLLGVIVE   70 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEEcC--------CcEEEEEeCCCch--HHHHHHH-HHHHHhC-CCCCeeeEEEEEEc
Confidence            667899999999999999999997642        3699999864322  2333333 3444444 6899999998754 


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..+++|||++ |+|.+++.......+++..++.++.|++.||+|||+++|+||||||+|||+++++.+||+|||+++
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~  150 (256)
T cd05082          71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTK  150 (256)
T ss_pred             CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccce
Confidence            4567999999998 588888766544568999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .....      .....++..|+|||++..   ..++.++|+|||||++|||++ |+.||...+..+....+. ....+..
T Consensus       151 ~~~~~------~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~  220 (256)
T cd05082         151 EASST------QDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA  220 (256)
T ss_pred             ecccc------CCCCccceeecCHHHHcc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCC
Confidence            54221      112234678999999864   357889999999999999998 999998887776665554 3345556


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +..+|+.+.+++.+||+.||++||++.++++.|+.
T Consensus       221 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         221 PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            78899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=8.5e-37  Score=309.34  Aligned_cols=253  Identities=25%  Similarity=0.411  Sum_probs=202.4

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||+|.+...+   .....||||.+..... ...+.+.++ ...+.++ +|+||+.+++.+.. ...+++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSG---GKVIPVAVKCLKSDKLSDIMDDFLKE-AAIMHSL-DHENLIRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCC---CCceEEEEeecCCcccHHHHHHHHHH-HHHHhhc-CCCCccceeEEEcC-CeEEEEE
Confidence            46899999999999986532   1224699999976554 233333333 3444444 68999999998887 8999999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||++ |+|.+.+.......+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||+++.........
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY  154 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence            9997 688888876543578999999999999999999999999999999999999999999999999998764321111


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......++..|+|||++...   .++.++|+|||||++|||++ |..||...+..++...+.........+..+|..+.
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (257)
T cd05040         155 VMEEHLKVPFAWCAPESLRTR---TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIY  231 (257)
T ss_pred             ecccCCCCCceecCHHHhccc---CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHH
Confidence            111234567899999998643   57889999999999999998 99999888877776666544455556678899999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          286 NVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      +++.+||+.+|++||++.++++.|.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHHHhc
Confidence            9999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-36  Score=312.28  Aligned_cols=264  Identities=21%  Similarity=0.329  Sum_probs=210.0

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+...+|++.+.||+|+||.||+|.+..+++  .....||+|.+....... ...+.+ +...+..+ .|+|++.+++++
T Consensus         3 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~--~~~~~~aik~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~i~~~~~~~   78 (279)
T cd05057           3 ILKETELEKIKVLGSGAFGTVYKGVWIPEGE--KVKIPVAIKVLREETSPKANKEILD-EAYVMASV-DHPHVVRLLGIC   78 (279)
T ss_pred             ccCHHHcEEcceecCCCCccEEEEEEecCCC--CcceEEEEEeccCCCCHHHHHHHHH-HHHHHHhC-CCCCcceEEEEE
Confidence            4566899999999999999999999876543  123479999887654322 233333 33444554 789999999988


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .. ...+++|||++ |+|.+.+... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        79 ~~-~~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~  156 (279)
T cd05057          79 LS-SQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (279)
T ss_pred             ec-CceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccc
Confidence            76 78999999998 6888777653 346899999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +........ .......++..|+|||.+.   .+.++.++|+|||||++||+++ |..||.+.+..++...+. ......
T Consensus       157 ~~~~~~~~~-~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~  231 (279)
T cd05057         157 KLLDVDEKE-YHAEGGKVPIKWMALESIL---HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE-KGERLP  231 (279)
T ss_pred             ccccCcccc-eecCCCcccccccCHHHhh---cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-CCCCCC
Confidence            765322111 1111122467899999886   3467889999999999999998 999999988877766554 344455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .|..++.++.+++.+||..||.+||++.++++.|+.+.
T Consensus       232 ~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         232 QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA  269 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            67788999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-36  Score=317.99  Aligned_cols=269  Identities=20%  Similarity=0.281  Sum_probs=208.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||.+.+.....  .......+..++..+ .|++|+.+++.+..+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~   73 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTG------KLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTE   73 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCC------cEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecC
Confidence            47999999999999999999987654      489999997643221  122223333444444 589999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..|++|||+.| +|.+++....+..+++..++.++.|++.||+|||+.+++|+||||+|||++.++.++|+|||++...
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574          74 TYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             CEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence            999999999985 8888776555568999999999999999999999999999999999999999999999999998754


Q ss_pred             cCCCCC--------------------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCC
Q 006772          200 LGRSLS--------------------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQ  253 (632)
Q Consensus       200 ~~~~~~--------------------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~  253 (632)
                      ......                          ........||..|+|||++.+   ..++.++|+||||+++|+|++|..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Di~slG~ll~~l~~g~~  230 (316)
T cd05574         154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG---DGHGSAVDWWTLGILLYEMLYGTT  230 (316)
T ss_pred             cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC---CCCCchHHHHHHHHHHHHHhhCCC
Confidence            221100                          001112468899999999874   357889999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCC----HHHHHHHHHhhhhcccCCCCcccccc
Q 006772          254 PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL----MADILHAFESSQNAVYNDGEWTGLGS  327 (632)
Q Consensus       254 PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs----~~ell~~Le~~~~~~~~~~~w~~~~~  327 (632)
                      ||.+.+..+.+..+............++.++.++|.+||+.||++||+    +.+++.      ++++...+|..+..
T Consensus       231 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~------~~~~~~~~~~~~~~  302 (316)
T cd05574         231 PFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ------HPFFRGVNWALIRH  302 (316)
T ss_pred             CCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc------CchhhcCChhhccc
Confidence            999888777666655322222222337999999999999999999999    666665      55666677765443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-36  Score=309.73  Aligned_cols=253  Identities=22%  Similarity=0.382  Sum_probs=202.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+..+|++.+.||+|+||.||+|.++..       ..+|+|.+.+.... ...+.++. .++..+ +|+||+.+++++..
T Consensus         1 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~-------~~~~iK~~~~~~~~-~~~~~~e~-~~l~~l-~~~~i~~~~~~~~~   70 (256)
T cd05059           1 IDPSELTFLKELGSGQFGVVHLGKWRGK-------IDVAIKMIREGAMS-EDDFIEEA-KVMMKL-SHPNLVQLYGVCTK   70 (256)
T ss_pred             CChHHcchhhhhccCCCceEEEeEecCC-------ccEEEEEeccCCCC-HHHHHHHH-HHHHhC-CCCCEEEEEEEEcC
Confidence            5677899999999999999999987532       36999998643221 22333332 344444 68999999999998


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .+..|++|||++ ++|.+++... ...+++..++.++.|++.||+|||+++|+||||||+||++++++.+||+|||+++.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~  149 (256)
T cd05059          71 QRPIFIVTEYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARY  149 (256)
T ss_pred             CCceEEEEecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCccccee
Confidence            999999999997 5777777543 34789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||.+.+   ..++.++|+||||+++|||++ |..||...+..+....+.. ...+..|
T Consensus       150 ~~~~~~~--~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  223 (256)
T cd05059         150 VLDDQYT--SSQGTKFPVKWAPPEVFDY---SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA-GYRLYRP  223 (256)
T ss_pred             ccccccc--ccCCCCCCccccCHHHhcc---CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc-CCcCCCC
Confidence            5322111  1111123457999999874   357889999999999999999 8999988877776665542 3345567


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ..+|.++.+++.+||..+|++||++.++++.|
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            78999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=3e-36  Score=304.96  Aligned_cols=250  Identities=23%  Similarity=0.442  Sum_probs=200.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-CC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVI-NG  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-~~  121 (632)
                      .|++.+.||.|+||.||++.+..++      +.||+|.+..... .........+..++..+ +|++++.+.+.+.. ++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   73 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDG------KQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDG   73 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCC------cEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCC
Confidence            4899999999999999999987654      4799999864322 11122223333444444 68999998887653 45


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|++|||++ +++.+.+.......+++.+++.++.|++.||+|||+++|+||||||+||+++.++.++|+|||+++...
T Consensus        74 ~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~  153 (257)
T cd08223          74 LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE  153 (257)
T ss_pred             EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence            7899999998 578777776555679999999999999999999999999999999999999999999999999988653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ...   .......|++.|+|||++.+   ..++.++|+|||||++|+|++|+.||...+.......+.. ...+..+...
T Consensus       154 ~~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  226 (257)
T cd08223         154 NQC---DMASTLIGTPYYMSPELFSN---KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-GKLPPMPKDY  226 (257)
T ss_pred             ccC---CccccccCCcCccChhHhcC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cCCCCCcccc
Confidence            321   12233568999999999864   3678899999999999999999999998776665555442 3344566789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++++.+++.+||+.||++||++.++++
T Consensus       227 ~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         227 SPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             CHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            999999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-36  Score=311.53  Aligned_cols=253  Identities=20%  Similarity=0.298  Sum_probs=199.5

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      +.||+|+||.||+|.+..++.    ...+++|.++.............+..++.++.+|+||+.+++++...+..+++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGL----RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCC----eeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEE
Confidence            358999999999999876542    1257899887543222222233444566777789999999999999999999999


Q ss_pred             cCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          129 FYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       129 y~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      |++ |+|.+++....              ...+++..++.++.|++.||+|||+++++||||||+|||+++++.+||+||
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~df  156 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF  156 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCC
Confidence            998 68888876532              135789999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      |++......    ........+..|+|||++..   ..++.++|+|||||++|||++ |..||.+.+..+....+.. ..
T Consensus       157 gl~~~~~~~----~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~  228 (270)
T cd05047         157 GLSRGQEVY----VKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GY  228 (270)
T ss_pred             CCccccchh----hhccCCCCccccCChHHHcc---CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-CC
Confidence            997532110    01111233567999999863   367889999999999999997 9999988877666655432 33


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ....+..++.++.+++.+||..||.+||++.+++..|+.+.
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         229 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            44456778999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.5e-36  Score=311.30  Aligned_cols=249  Identities=19%  Similarity=0.285  Sum_probs=195.8

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--CE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--GK  122 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--~~  122 (632)
                      |++.+.||+|+||.||+|.+..++      +.||+|.++.............+...+..+.+|+|++.+++++.++  +.
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~------~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   74 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTG------KYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGR   74 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCC------cEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCc
Confidence            678999999999999999987655      4899999875422221111122334556666799999999999887  89


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      +++||||++|++.+.+... ...+++.+++.++.|++.||+|||+++++||||||+||+++. +.+||+|||+++.....
T Consensus        75 ~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          75 LALVFELMDMNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             EEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence            9999999999999887653 357899999999999999999999999999999999999999 99999999998765322


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc----------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE----------  272 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~----------  272 (632)
                      .    ......++..|+|||++...  +.++.++|+|||||++|||++|..||.+.+..+....+.....          
T Consensus       153 ~----~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07831         153 P----PYTEYISTRWYRAPECLLTD--GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF  226 (282)
T ss_pred             C----CcCCCCCCcccCChhHhhcC--CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence            1    11234578999999987532  3467899999999999999999999988776554433321100          


Q ss_pred             ------CCCC-----------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 ------KPCI-----------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ------~p~~-----------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                            ...+           ...++.++.++|.+||++||++||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                  0011           1256789999999999999999999999886

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.6e-36  Score=310.83  Aligned_cols=263  Identities=21%  Similarity=0.366  Sum_probs=208.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |..++|++.+.||+|+||.||+|+++...+ ....+.|++|.+...... ....+.+ +..++.++ +|+||+.+++++.
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~~   78 (275)
T cd05046           2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEE-EGGETLVLVKALQKTKDENLQSEFRR-ELDMFRKL-SHKNVVRLLGLCR   78 (275)
T ss_pred             CChHhceeeeeecccceeEEEEEEeccCCc-CCCcceEEEEccCCccchHHHHHHHH-HHHHHHhc-CCcceeeeEEEEC
Confidence            456889999999999999999999875543 233458999998654433 2233333 33455555 7899999999998


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRG-------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~-------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      ..+..|+||||++ |+|.+++.....       ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l  158 (275)
T cd05046          79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV  158 (275)
T ss_pred             CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE
Confidence            8899999999998 688777765431       16899999999999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~  269 (632)
                      +|||+++.......  .......++..|+|||.+.+   +.++.++|+||||+++|+|++ |..||......+....+..
T Consensus       159 ~~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~  233 (275)
T cd05046         159 SLLSLSKDVYNSEY--YKLRNALIPLRWLAPEAVQE---DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA  233 (275)
T ss_pred             cccccccccCcccc--cccCCceeEEeecChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc
Confidence            99999865432211  11223356788999999863   357789999999999999998 8899988776666665554


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      .......+..+|..+.+++.+||+.||.+||++.+++..|.
T Consensus       234 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         234 GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            44344456788999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-36  Score=315.80  Aligned_cols=265  Identities=23%  Similarity=0.365  Sum_probs=201.4

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCC--------cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADD--------FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~--------~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~  112 (632)
                      ..++|++.++||+|+||.||+|.+...++.        ......||+|.+.+.........+.++..++..+ +|+|++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~   81 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIR   81 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence            457899999999999999999987543210        1122469999987643332222233344455554 6899999


Q ss_pred             eeEEEEECCEEEEEEecCC-CCHHHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEE
Q 006772          113 LHGISVINGKICIAMKFYE-GSVGDRIAQQR----------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLL  181 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~----------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NIL  181 (632)
                      +++++..++..++||||+. ++|.+++....          ...+++..++.++.|++.||+|||+++++||||||+|||
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil  161 (295)
T cd05097          82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL  161 (295)
T ss_pred             EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence            9999999999999999998 57777765421          024688899999999999999999999999999999999


Q ss_pred             EecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh--CCCCCCCCC
Q 006772          182 LSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT--GIQPWFGKS  259 (632)
Q Consensus       182 ld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt--G~~PF~~~~  259 (632)
                      +++++.+||+|||++........ ........++..|+|||++..   +.++.++|+|||||++|||++  +..||...+
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~  237 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILL---GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS  237 (295)
T ss_pred             EcCCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhcc---CCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence            99999999999999875432211 111122345778999999863   468899999999999999998  778998877


Q ss_pred             HHHHHHHHHh------hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          260 VEEIYHSVVI------KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       260 ~~ei~~~i~~------~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      ..+....+..      .......+..+|+.+.+++.+||+.||++||++.+|++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         238 DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            6655443321      11122345668899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-36  Score=305.39  Aligned_cols=252  Identities=23%  Similarity=0.398  Sum_probs=204.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      +.||+|+||.||+|.+....   .....|++|.+..............+...+..+. |++++.+++++..++.++++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKD---GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCC---CCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEE
Confidence            46999999999999987541   1235899999976544332222333334555554 9999999999999999999999


Q ss_pred             cCC-CCHHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          129 FYE-GSVGDRIAQQR-------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       129 y~~-GsL~d~l~~~~-------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      |++ |+|.+++....       ...+++..++.++.|++.||+|||+++++||||||+||++++++.++|+|||.+....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  156 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY  156 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence            996 68888776542       3679999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      .... ........++..|+|||.+...   .++.++|+|||||++|||++ |..||...+..+....+.. ......|..
T Consensus       157 ~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~  231 (262)
T cd00192         157 DDDY-YRKKTGGKLPIRWMAPESLKDG---IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRLPKPEY  231 (262)
T ss_pred             cccc-cccccCCCcCccccCHHHhccC---CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCcc
Confidence            3221 1112334578899999998743   67899999999999999999 6999999888777766653 455667788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      +|+++.+++.+||+.||.+||++.++++.|
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         232 CPDELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             CChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=334.05  Aligned_cols=268  Identities=23%  Similarity=0.413  Sum_probs=229.1

Q ss_pred             CCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee
Q 006772           32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        32 ~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      .|+...+.+++.++.+.++||.|.||+||.|.|++-.      -.||||.|+... ...++|+.+. .+++. .+|||++
T Consensus       256 SPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkys------lTvAVKtLKEDt-MeveEFLkEA-AvMKe-ikHpNLV  326 (1157)
T KOG4278|consen  256 SPNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDT-MEVEEFLKEA-AVMKE-IKHPNLV  326 (1157)
T ss_pred             cCCcchhhccchheeeeeccCCCcccceeeeeeeccc------eeeehhhhhhcc-hhHHHHHHHH-HHHHh-hcCccHH
Confidence            4666677789999999999999999999999998644      379999996543 4456666654 44444 4899999


Q ss_pred             EeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          112 WLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      +|.++|+.+-..|||+|||. |+|+|++.+-.+..++.--.+.++.||..|++||..+++|||||..+|+|+.++..+|+
T Consensus       327 qLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKv  406 (1157)
T KOG4278|consen  327 QLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKV  406 (1157)
T ss_pred             HHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEe
Confidence            99999999999999999998 99999998876667777788889999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~  269 (632)
                      +||||++++.+..+.-.  ....-.+.|.|||-+.   +..++.++|||+|||+|||+.| |..||.|.+..+.|..+ .
T Consensus       407 ADFGLsRlMtgDTYTAH--AGAKFPIKWTAPEsLA---yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL-E  480 (1157)
T KOG4278|consen  407 ADFGLSRLMTGDTYTAH--AGAKFPIKWTAPESLA---YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL-E  480 (1157)
T ss_pred             eccchhhhhcCCceecc--cCccCcccccCccccc---ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH-h
Confidence            99999998866533221  1112267899999986   5578999999999999999999 99999999988887654 4


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ++.+..-|.+||+.+.+||+.||+.+|.+||+++|+...|+.+.+
T Consensus       481 kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  481 KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            567777899999999999999999999999999999999988754

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.1e-36  Score=312.34  Aligned_cols=264  Identities=22%  Similarity=0.329  Sum_probs=197.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      ...|++.+.||+|+||.||+|.+.....  .....||+|.++............++..++..+ .|+|++.+.+++... 
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEGD--NTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDG   79 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCCC--CccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCC
Confidence            3568999999999999999998653221  234589999987654333222333343455554 789999999988765 


Q ss_pred             -CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          121 -GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       121 -~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                       ...++||||++ |+|.+++.+. ...+++..++.++.|++.||+|||+++++||||||+|||++.++.++|+|||+++.
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence             57899999998 5666666443 34689999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--------------HHHHH
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--------------VEEIY  264 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--------------~~ei~  264 (632)
                      ...............|+..|+|||.+.+   ..++.++|+|||||++|||+++..|+....              .....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLIQ---SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL  235 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhcc---CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence            5332211111223456788999999864   357889999999999999999876643211              00111


Q ss_pred             HHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       265 ~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ............+..++.++.+|+.+||+.||.+||++.++++.|+.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            111222233445677899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-36  Score=305.80  Aligned_cols=252  Identities=21%  Similarity=0.370  Sum_probs=197.7

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      ++||+|+||.||+|.+...+.   ....+|+|.+...... ....+.++ ..++..+ .|+|++.+++++. ....+++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSG---KEVEVAVKTLKQEHIAAGKKEFLRE-ASVMAQL-DHPCIVRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCC---CcceEEEEecccccchHHHHHHHHH-HHHHHhc-CCCCeeeEEEEEc-CCceEEEE
Confidence            479999999999998765441   2258999998755432 22333333 3444444 6899999998765 45689999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||++ |+|.+++...  ..+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||+++.........
T Consensus        75 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~  152 (257)
T cd05060          75 ELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY  152 (257)
T ss_pred             EeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence            9998 6888887653  378999999999999999999999999999999999999999999999999987653221111


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......++..|+|||.+..   +.++.++|+|||||++|||++ |..||...+..+....+. .......|..++..+.
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  228 (257)
T cd05060         153 RATTAGRWPLKWYAPECINY---GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE-SGERLPRPEECPQEIY  228 (257)
T ss_pred             ccccCccccccccCHHHhcC---CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCcCCCCCCCCHHHH
Confidence            11111224568999999863   468889999999999999998 999998887766655554 3444556788999999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          286 NVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ++|.+||..||++||++.++++.|+..
T Consensus       229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         229 SIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.4e-36  Score=312.63  Aligned_cols=254  Identities=20%  Similarity=0.359  Sum_probs=199.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE---
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI---  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~---  119 (632)
                      ..|++.+.||.|+||.||+|.+..++      +.||+|.+...... ... ...+..++..+.+|+|++.+++++..   
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~a~K~~~~~~~~-~~~-~~~e~~~l~~~~~h~~i~~~~~~~~~~~~   87 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTG------QLAAIKVMDVTEDE-EEE-IKLEINMLKKYSHHRNIATYYGAFIKKSP   87 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCC------cEEEEEEEecChHH-HHH-HHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence            68999999999999999999987655      48999998653322 222 23334556666789999999998753   


Q ss_pred             ---CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          120 ---NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       120 ---~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                         ++.+|++|||+. |+|.+++.......+++..++.++.||+.||.|||+++|+|+||||+||++++++.++|+|||+
T Consensus        88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~  167 (282)
T cd06636          88 PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGV  167 (282)
T ss_pred             cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcc
Confidence               467899999998 5888887765556789999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +......   ........|++.|+|||++....  ...++.++|+|||||++|||++|..||....+.+....+......
T Consensus       168 ~~~~~~~---~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~  244 (282)
T cd06636         168 SAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPP  244 (282)
T ss_pred             hhhhhcc---ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCC
Confidence            8654221   11223456899999999986321  235788999999999999999999999876654443333222222


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+..++.++.++|.+||..||.+||++.||++
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         245 KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            2233468999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-36  Score=305.96  Aligned_cols=256  Identities=25%  Similarity=0.450  Sum_probs=207.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.+.||+|+||.||+|.+..+       +.||||.+...... ...+.++. .+++.+ .|++++.+++++..
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~-------~~~~vK~~~~~~~~-~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~   72 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGT-------TKVAVKTLKPGTMS-PEAFLQEA-QIMKKL-RHDKLVQLYAVCSE   72 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCC-------ceEEEEEecCCccC-HHHHHHHH-HHHhhC-CCCCEeeeeeeeec
Confidence            6778999999999999999999986532       36999998754322 23343333 344444 68999999999988


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..+++|||++ ++|.+.+.......+++..++.++.|++.||.|||+++++|+||||+||++++++.++|+|||++..
T Consensus        73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~  152 (261)
T cd05034          73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARL  152 (261)
T ss_pred             CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECcccccee
Confidence            899999999998 5788888665556799999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||.+.+   ..++.++|+|||||++|||++ |+.||.+.+.......+.. ......+
T Consensus       153 ~~~~~~~--~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~  226 (261)
T cd05034         153 IEDDEYT--AREGAKFPIKWTAPEAANY---GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GYRMPRP  226 (261)
T ss_pred             ccchhhh--hhhccCCCccccCHHHhcc---CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCC
Confidence            5321111  1112234578999999874   357889999999999999998 9999998877766666543 3344456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ...|.++.+++.+||..||.+||+++++++.|+.
T Consensus       227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         227 PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            7789999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.7e-36  Score=313.67  Aligned_cols=263  Identities=19%  Similarity=0.349  Sum_probs=200.4

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCC----------CcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCce
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSAD----------DFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSV  110 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~----------~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I  110 (632)
                      .++|++.++||+|+||.||+|.+.....          .......||+|++........ ..+.+ +..++..+ +|+||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~-E~~~l~~l-~~~~i   81 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK-EIKIMSRL-KDPNI   81 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHH-HHHHHHhC-CCCCc
Confidence            4679999999999999999997653211          011234799999875433222 33333 33445555 78999


Q ss_pred             eEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          111 CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG---------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       111 ~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~---------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      +.+++++..++..+++|||+. |+|.+++.....         ..+++..++.++.|++.||+|||+++|+||||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni  161 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC  161 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence            999999999999999999998 688877765321         2477889999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh--CCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT--GIQPWFGK  258 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt--G~~PF~~~  258 (632)
                      |++.++.++|+|||+++.+...... .......+++.|++||....   +.++.++|+|||||++|||++  |..||...
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~---~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~  237 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMSWESILL---GKFTTASDVWAFGVTLWEILTLCKEQPYSQL  237 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcce-eccCcCcCccccCCHHHHhc---CCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence            9999999999999998765322111 11122234678999998753   468899999999999999998  78999877


Q ss_pred             CHHHHHHHHHh------hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          259 SVEEIYHSVVI------KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       259 ~~~ei~~~i~~------~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      +..+.......      .......+..+++.+.+++.+||+.||.+||++.+|++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            76655433211      11122345678899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.6e-36  Score=306.64  Aligned_cols=255  Identities=21%  Similarity=0.360  Sum_probs=194.9

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEE-ECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISV-INGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~-~~~~l~LV  126 (632)
                      +.||+|+||.||+|.+.....   ....||||.+..... .....+..+ ..++.. .+|+|++.+++++. .++..+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e-~~~l~~-l~h~~iv~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDG---QKIHCAVKSLNRITDLEEVEQFLKE-GIIMKD-FSHPNVLSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCC---ceEEEEEEecCccCCHHHHHHHHHH-HHHHcc-CCCCCcceEEEEeecCCCCcEEE
Confidence            468999999999998754331   235799999864332 222333333 334444 47999999999765 45678999


Q ss_pred             EecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||+. |+|.+++... ...+++..++.++.|++.||+|||+++++||||||+|||+++++.+||+|||+++........
T Consensus        76 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          76 LPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             EecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence            99998 6777776543 345678888999999999999999999999999999999999999999999998754332111


Q ss_pred             C-CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHH
Q 006772          206 D-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA  283 (632)
Q Consensus       206 ~-~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~  283 (632)
                      . .......++..|+|||.+..   ..++.++|+|||||++|||++ |.+||...+..++...+. ....+..+..+|..
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  230 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL-QGRRLLQPEYCPDP  230 (262)
T ss_pred             eecccccCcCCccccChhHhcc---CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHH
Confidence            1 11122345778999999863   368889999999999999999 567787777666555443 33455566778999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          284 VENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +.+++.+||+.+|++||++.++++.|+.+.
T Consensus       231 ~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         231 LYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.5e-36  Score=308.41  Aligned_cols=257  Identities=19%  Similarity=0.338  Sum_probs=199.0

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      |.+.+.||+|+||.||+|.+...+.    ...||+|.++...  ....+.+..+ ..++..+ +|+||+.+++.+...  
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~----~~~~a~k~~~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~~~~~~   74 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDS----ILKVAVKTMKIAICTRSEMEDFLSE-AVCMKEF-DHPNVMRLIGVCLQTVE   74 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCC----eeeEEEEecccCcCCHHHHHHHHHH-HHHHHhC-CCCCcceEEEEEccCCc
Confidence            3577899999999999999865442    1369999886532  2223333333 3445554 799999999876432  


Q ss_pred             ----CEEEEEEecCC-CCHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          121 ----GKICIAMKFYE-GSVGDRIAQQ----RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       121 ----~~l~LVmEy~~-GsL~d~l~~~----~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                          ...+++|||+. |+|.+.+...    ....+++..++.++.|++.||+|||+++|+||||||+|||+++++.+||+
T Consensus        75 ~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  154 (272)
T cd05075          75 SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVA  154 (272)
T ss_pred             ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEEC
Confidence                24789999998 6777766432    12458999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+++........ .......+++.|+|||.+..   ..++.++|+|||||++|||++ |..||.+....++...+.. 
T Consensus       155 Dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-  229 (272)
T cd05075         155 DFGLSKKIYNGDYY-RQGRIAKMPVKWIAIESLAD---RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-  229 (272)
T ss_pred             CCCcccccCcccce-ecCCcccCCcccCCHHHccC---CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-
Confidence            99998865322111 11122345778999999864   357889999999999999999 8999998877777666543 


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ...+..+..++..+.++|.+||+.||++||++.++++.|+.+
T Consensus       230 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         230 GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            344456778999999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3e-37  Score=318.97  Aligned_cols=255  Identities=23%  Similarity=0.323  Sum_probs=203.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .+.|+..++||+|+||+||+|+.+.++      +.||+|++..... +.......++..++..+.+.+||+.+++++.++
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g------~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~   83 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTG------KFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTS   83 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCC------CEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence            456888889999999999999998876      4899999976543 222233334445566665444499999999887


Q ss_pred             C------EEEEEEecCCCCHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          121 G------KICIAMKFYEGSVGDRIAQQRG--GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       121 ~------~l~LVmEy~~GsL~d~l~~~~~--~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      +      .+++|+||++-+|.+++.....  ..++...++.++.||+.||+|||+++|+||||||+||||+++|.+||+|
T Consensus        84 ~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaD  163 (323)
T KOG0594|consen   84 NNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLAD  163 (323)
T ss_pred             ccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeec
Confidence            6      8999999999999999877643  3577789999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+|+...   .+...++...+|.+|.|||++.+..  .|+...|+||+||++.||++++..|.+.+..+....|...-.
T Consensus       164 FGlAra~~---ip~~~yt~evvTlWYRaPEvLlGs~--~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG  238 (323)
T KOG0594|consen  164 FGLARAFS---IPMRTYTPEVVTLWYRAPEVLLGST--SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG  238 (323)
T ss_pred             cchHHHhc---CCcccccccEEEeeccCHHHhcCCC--cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC
Confidence            99998542   2233355668899999999998763  489999999999999999999999999987665555552221


Q ss_pred             CC----------------CCC------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KP----------------CIP------------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p----------------~~p------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .|                .++            +..+++..+++.+||+++|.+|.|++..+.
T Consensus       239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~  301 (323)
T KOG0594|consen  239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT  301 (323)
T ss_pred             CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence            11                111            122348899999999999999999998776

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4.5e-36  Score=306.99  Aligned_cols=262  Identities=23%  Similarity=0.399  Sum_probs=206.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +++.++|.+.+.||+|+||.||+|.+.....   ....||||...... ....+.+.+ +..++..+ .|+|++.+++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~-e~~~l~~~-~h~~i~~~~~~~   76 (270)
T cd05056           2 EIQREDITLGRCIGEGQFGDVYQGVYMSPEN---EKIAVAVKTCKNCTSPSVREKFLQ-EAYIMRQF-DHPHIVKLIGVI   76 (270)
T ss_pred             eechhhceeeeeeCCccceeEEEEEEecCCC---CCcceEEEecCCcCCHHHHHHHHH-HHHHHHhC-CCCchhceeEEE
Confidence            3567889999999999999999998765421   22469999886544 233333333 33444554 689999999887


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .. +..|++|||++ |+|.+++... ...+++..++.++.|++.||+|||+++++||||||+|||++.++.++|+|||++
T Consensus        77 ~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~  154 (270)
T cd05056          77 TE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS  154 (270)
T ss_pred             cC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCcee
Confidence            64 56789999998 6787777543 346899999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.........  .....++..|+|||.+..   ..++.++|+|||||++|||++ |..||.+.+..+....+. ....+.
T Consensus       155 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~~  228 (270)
T cd05056         155 RYLEDESYYK--ASKGKLPIKWMAPESINF---RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE-NGERLP  228 (270)
T ss_pred             eeccccccee--cCCCCccccccChhhhcc---CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCcCC
Confidence            7654321111  112234568999999863   357899999999999999996 999999887766655543 344556


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+..+|.++.++|.+||..+|.+||++.+++..|+.+.
T Consensus       229 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         229 MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            67889999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=6.2e-37  Score=309.67  Aligned_cols=249  Identities=23%  Similarity=0.404  Sum_probs=197.5

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHH-HHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~-~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      |++.+.||+|+||.||+|.+..++      ..||+|.+........... ...+...+..+ +|++|+.+.+++..+...
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~   73 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNG------QKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYL   73 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTT------EEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCC------eEEEEEEeccccccccccchhhhhhhccccc-cccccccccccccccccc
Confidence            789999999999999999998765      3899999987654433321 12233455555 799999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      +++|||+.+ +|.+++..  ...+++..++.++.||+.||++||+++|+|+||||+|||++.++.++|+|||++..... 
T Consensus        74 ~~v~~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-  150 (260)
T PF00069_consen   74 YIVMEYCPGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-  150 (260)
T ss_dssp             EEEEEEETTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-
T ss_pred             cccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            999999997 88888863  35889999999999999999999999999999999999999999999999999875411 


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhhccCC--CCC
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---EIYHSVVIKKEKP--CIP  277 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---ei~~~i~~~~~~p--~~p  277 (632)
                        .........+|..|+|||++..  ...++.++|+||||+++|+|++|..||......   .............  ...
T Consensus       151 --~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T PF00069_consen  151 --NNENFNPFVGTPEYMAPEVLQQ--GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQS  226 (260)
T ss_dssp             --TTSEBSSSSSSGGGSCHHHHTT--TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSH
T ss_pred             --cccccccccccccccccccccc--cccccccccccccccccccccccccccccccchhhhhhhhhccccccccccccc
Confidence              1223344578999999999861  235788999999999999999999999987322   2222222111111  111


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+.++.++|.+||+.||++||++.++++
T Consensus       227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  227 REKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             TTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             chhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            223489999999999999999999999886

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.9e-36  Score=310.76  Aligned_cols=243  Identities=26%  Similarity=0.423  Sum_probs=191.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++..... .....+.++ ..++.++ +|+|++.+++.+..++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~~~~~   72 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTR------RILAVKVIPLDITVELQKQIMSE-LEILYKC-DSPYIIGFYGAFFVEN   72 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCC------cEEEEEEEecCCChHHHHHHHHH-HHHHHhC-CCCCeeeEEEEEEECC
Confidence            47899999999999999999987655      4899999865422 222333333 3344444 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..+++|||++|..++..     ..+++..+..++.|++.||+|||+++|+|+||||+|||++.++.++|+|||++.....
T Consensus        73 ~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          73 RISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             EEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            99999999997555433     2578999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhhccCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-------EEIYHSVVIKKEKP  274 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-------~ei~~~i~~~~~~p  274 (632)
                           .......||..|+|||++.+.   .++.++|+|||||++|+|++|..||.....       .+....+. ....+
T Consensus       148 -----~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~  218 (279)
T cd06619         148 -----SIAKTYVGTNAYMAPERISGE---QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV-DEDPP  218 (279)
T ss_pred             -----ccccCCCCChhhcCceeecCC---CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh-ccCCC
Confidence                 122345789999999998743   578899999999999999999999975321       12222222 12222


Q ss_pred             CC-CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CI-PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~-p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .. ....++++.++|.+||+.||++||++.++++
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         219 VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            22 2457889999999999999999999999886

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.7e-36  Score=310.93  Aligned_cols=253  Identities=19%  Similarity=0.316  Sum_probs=199.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      -|++.+.||+|+||.||+|.+..++      ..+++|.+..........+.++. .++..+ +|+|++.+++.+..++..
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~e~-~~l~~l-~h~~ii~~~~~~~~~~~~   77 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETG------VLAAAKVIDTKSEEELEDYMVEI-DILASC-DHPNIVKLLDAFYYENNL   77 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCC------eEEEEEEeCCCCHHHHHHHHHHH-HHHHHC-CCCCeeeEEEEEeeCCEE
Confidence            3688899999999999999987655      47899998655444444444433 344444 799999999999999999


Q ss_pred             EEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          124 CIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       124 ~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      |+||||+.|+.++.+.......+++..+..++.|++.||+|||+.+|+||||||+|||++.++.++|+|||++.......
T Consensus        78 ~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~  157 (282)
T cd06643          78 WILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI  157 (282)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence            99999999644444333334579999999999999999999999999999999999999999999999999986543211


Q ss_pred             CCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCCCCCCCC
Q 006772          204 LSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKPCIPSGL  280 (632)
Q Consensus       204 ~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p~~p~~l  280 (632)
                         .......|+..|+|||++...  ....++.++|+|||||++|||++|..||...+..+....+.... .....|..+
T Consensus       158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
T cd06643         158 ---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW  234 (282)
T ss_pred             ---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCcccc
Confidence               122334689999999998532  13457889999999999999999999998877665544443221 122345678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++.++|.+||+.||.+||++.+++.
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         235 SSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.4e-36  Score=327.07  Aligned_cols=260  Identities=23%  Similarity=0.349  Sum_probs=199.3

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ..+|++.+.||+|+||.||+|......    ....||+|.+.....      ..++..++..+ +|+||+.+++.+..++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~----~~~~v~vK~~~~~~~------~~~E~~il~~l-~h~~iv~~~~~~~~~~  159 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDE----QRKKVIVKAVTGGKT------PGREIDILKTI-SHRAIINLIHAYRWKS  159 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCc----cceeEEEEecccccc------HHHHHHHHHhc-CCCCccceeeeEeeCC
Confidence            357999999999999999999765322    235899998864321      12233444454 6899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .+|++||++.+++.+++.  ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++....
T Consensus       160 ~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        160 TVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             EEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            999999999999998883  346899999999999999999999999999999999999999999999999999876533


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhh--------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---EIYHSVVIK--------  270 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---ei~~~i~~~--------  270 (632)
                      ... ........||+.|+|||++..   ..++.++|+|||||++|||++|..||.+....   ..+..+...        
T Consensus       238 ~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~  313 (392)
T PHA03207        238 HPD-TPQCYGWSGTLETNSPELLAL---DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF  313 (392)
T ss_pred             ccc-cccccccccccCccCHhHhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence            211 112234579999999999974   36889999999999999999999999875421   111111110        


Q ss_pred             -----------------ccCCC--CC-----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          271 -----------------KEKPC--IP-----SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       271 -----------------~~~p~--~p-----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                                       ..++.  .|     ..++.++.++|.+||..||++||++.|++.      +++|....|+.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~------~p~f~~~~~~~  385 (392)
T PHA03207        314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS------LPLFTKEPINL  385 (392)
T ss_pred             CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh------Cchhhccchhh
Confidence                             00111  11     235678999999999999999999999987      55565554443

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.2e-36  Score=310.48  Aligned_cols=254  Identities=22%  Similarity=0.319  Sum_probs=198.4

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|.++.........+.+ +..++..+ +|+||+.+++.+..+
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~-e~~~~~~l-~h~~ii~~~~~~~~~   78 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVNTG------ELAAIKVIKLEPGEDFAVVQQ-EIIMMKDC-KHSNIVAYFGSYLRR   78 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcCCC------cEEEEEEEecCchhHHHHHHH-HHHHHHhC-CCCCeeeEEEEEEeC
Confidence            3468999999999999999999987655      489999987543333233333 32344444 799999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..|++|||++| +|.+++..  .+.+++.+++.++.|++.||+|||+++++|+||||+|||++.++.++|+|||++...
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          79 DKLWICMEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             CEEEEEEeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence            999999999984 77776643  357999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-C--
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-I--  276 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-~--  276 (632)
                      ...   ........|+..|+|||++.....+.++.++|+|||||++|||++|..||....+.............+. .  
T Consensus       157 ~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  233 (267)
T cd06645         157 TAT---IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKD  233 (267)
T ss_pred             cCc---ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccc
Confidence            321   1122345789999999997533344678899999999999999999999977654433322222221111 1  


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...++..+.++|.+||+.||++||++.++++
T Consensus       234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            1257789999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-36  Score=313.15  Aligned_cols=252  Identities=22%  Similarity=0.375  Sum_probs=202.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.++||.|+||.||+|.+..++      ..||+|.+..........+..+. .++..+ +|+|++.+++.+..++.
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~~~~   76 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETG------LFAAAKIIQIESEEELEDFMVEI-DILSEC-KHPNIVGLYEAYFYENK   76 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCC------cEEEEEEEeeCCHHHHHHHHHHH-HHHHhC-CCCceeEEEEEEecCCe
Confidence            67999999999999999999987544      48999998765444444444443 455555 49999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++| +|.+++. .....+++..++.++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++.....
T Consensus        77 ~~lv~e~~~~~~L~~~~~-~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~  155 (280)
T cd06611          77 LWILIEFCDGGALDSIML-ELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS  155 (280)
T ss_pred             EEEEeeccCCCcHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence            9999999996 5555544 3345799999999999999999999999999999999999999999999999998765422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--CCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--CIP  277 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--~~p  277 (632)
                      .   ........||+.|+|||.+..+.  ...++.++|+|||||++|||++|..||...+..+....+.. ...+  ..+
T Consensus       156 ~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~  231 (280)
T cd06611         156 T---LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK-SEPPTLDQP  231 (280)
T ss_pred             c---ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc-CCCCCcCCc
Confidence            1   11223356899999999975321  23577899999999999999999999998877665555432 2222  235


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..++.++.++|.+||+.||.+||++.++++
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            678999999999999999999999999886

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.5e-36  Score=312.03  Aligned_cols=264  Identities=20%  Similarity=0.354  Sum_probs=205.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++.++|++.+.||+|+||.||+|.+.... +......||+|++..............+..++..+ .|+|++.+++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~   79 (288)
T cd05050           2 YPRNNIEYVRDIGQGAFGRVFQARAPGLL-PYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAV   79 (288)
T ss_pred             CChHhceecccccccccccEEEEEEcccC-CCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcC
Confidence            56789999999999999999999875311 01233589999987543322222233333444454 78999999999998


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCC
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR--------------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS  178 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~--------------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~  178 (632)
                      +...|++|||+. |+|.+++....                    ...+++..++.++.|++.||+|||+++++||||||+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~  159 (288)
T cd05050          80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR  159 (288)
T ss_pred             CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence            899999999998 58888876432                    124788899999999999999999999999999999


Q ss_pred             eEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCC
Q 006772          179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFG  257 (632)
Q Consensus       179 NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~  257 (632)
                      |||++.++.++|+|||++......... .......++..|+|||.+.+   ..++.++|+|||||++|||++ |..||.+
T Consensus       160 nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~~~~~p~~~  235 (288)
T cd05050         160 NCLVGENMVVKIADFGLSRNIYSADYY-KASENDAIPIRWMPPESIFY---NRYTTESDVWAYGVVLWEIFSYGMQPYYG  235 (288)
T ss_pred             heEecCCCceEECccccceecccCccc-cccCCCccChhhcCHHHHhc---CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999998754322111 11112234678999999864   368899999999999999998 8899998


Q ss_pred             CCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       258 ~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      .+..+....+.. ......+..++.++.+++.+||+.||.+||++.|+++.|+
T Consensus       236 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         236 MAHEEVIYYVRD-GNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             CCHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            887776665543 3334456788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5e-36  Score=303.88  Aligned_cols=251  Identities=24%  Similarity=0.405  Sum_probs=206.2

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.+.||+|+||.||+|....        +.||+|.+..... ....+.++. .++..+ .|+|++.+++++..
T Consensus         3 ~~~~~~~~~~~ig~g~~g~v~~~~~~~--------~~v~iK~~~~~~~-~~~~~~~e~-~~l~~l-~~~~i~~~~~~~~~   71 (256)
T cd05039           3 INSKELKLGATIGKGEFGDVMLGDYRG--------QKVAVKCLKDDST-AAQAFLAEA-SVMTTL-RHPNLVQLLGVVLQ   71 (256)
T ss_pred             cChhhccceeeeecCCCceEEEEEecC--------cEEEEEEeccchh-HHHHHHHHH-HHHHhc-CCcceeeeEEEEcC
Confidence            677899999999999999999998642        4799999975433 233444433 444554 68999999999988


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .+..++||||++ ++|.+++.......+++..++.++.|++.||.|||+++++||||||+|||++.++.++|+|||+++.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~  151 (256)
T cd05039          72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE  151 (256)
T ss_pred             CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccc
Confidence            899999999998 6888887665445799999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....      .....++..|+|||++..   +.++.++|+||||+++|||++ |..||...+..++...+. ....+..+
T Consensus       152 ~~~~------~~~~~~~~~~~ape~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~  221 (256)
T cd05039         152 ASQG------QDSGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE-KGYRMEAP  221 (256)
T ss_pred             cccc------cccCCCcccccCchhhcC---CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-cCCCCCCc
Confidence            5221      112234678999999863   467889999999999999997 999998887776655544 23345567


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ..+|+++.++|.+||..+|++||++.++++.|+.
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            7889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-36  Score=304.28  Aligned_cols=254  Identities=24%  Similarity=0.364  Sum_probs=200.0

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||.|+||.||+|.+..++      ..+++|.+..........+.++ ..++..+ +|+|++.+++.+..++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~e-~~~l~~~-~h~~i~~~~~~~~~~~   73 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATG------ELVAIKVIKLEPGDDFEIIQQE-ISMLKEC-RHPNIVAYFGSYLRRD   73 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCC------CEEEEEEEEcCchhhHHHHHHH-HHHHHhC-CCCChhceEEEEEeCC
Confidence            368999999999999999999987654      3799999876544333333333 3344444 7999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|++|||++| ++.+++.. ....+++..+..++.|++.||+|||+++|+|+||||+||++++++.++|+|||++....
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhh
Confidence            99999999996 55555543 33579999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---CCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---CIP  277 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---~~p  277 (632)
                      ...   .......++..|+|||.+.......++.++|+|||||++|||++|..||...+..+....+......+   ..+
T Consensus       153 ~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (262)
T cd06613         153 ATI---AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDK  229 (262)
T ss_pred             hhh---hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccch
Confidence            211   11233468889999999864423467889999999999999999999998877555443333221111   123


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+.++.+++.+||..||.+||++.+++.
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             hhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            456789999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.2e-36  Score=314.08  Aligned_cols=256  Identities=24%  Similarity=0.339  Sum_probs=198.2

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +.++|+..+.||+|+||.||++.+..++      +.||+|.+..............+..++.++..|+||+.+++++..+
T Consensus         2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~   75 (288)
T cd06616           2 TAEDLKDLGEIGRGAFGTVNKMLHKPSG------TIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE   75 (288)
T ss_pred             cHHHhHHHHHhCCCCceEEEEEEECCCC------CEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence            4567888899999999999999987655      4899999875432222222333344566666799999999999989


Q ss_pred             CEEEEEEecCCCCHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          121 GKICIAMKFYEGSVGDRIAQ---QRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~---~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      +..+++|||+.+++.++...   .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++
T Consensus        76 ~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  155 (288)
T cd06616          76 GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS  155 (288)
T ss_pred             CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchh
Confidence            99999999999877665432   2346799999999999999999999985 9999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~~p~  275 (632)
                      ......    .......|++.|+|||++.......++.++|+|||||++|||++|+.||..... .+....+. ....+.
T Consensus       156 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~  230 (288)
T cd06616         156 GQLVDS----IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVV-KGDPPI  230 (288)
T ss_pred             HHhccC----CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhc-CCCCCc
Confidence            754321    111233678999999998743223578899999999999999999999976542 12222221 122222


Q ss_pred             CC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+    ..++.++.+||.+||+.||++||++.+|++
T Consensus       231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            22    347899999999999999999999999886

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=7.7e-36  Score=303.91  Aligned_cols=255  Identities=25%  Similarity=0.467  Sum_probs=204.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |..++|++.++||+|+||.||+|.+...       ..+|+|.+..... ....+.+ +..++..+ +|++++.+++.+..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~-------~~~~iK~~~~~~~-~~~~~~~-e~~~l~~l-~~~~i~~~~~~~~~   72 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNKH-------TKVAVKTMKPGSM-SVEAFLA-EANVMKTL-QHDKLVKLHAVVTK   72 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecCC-------ccEEEEecCCChh-HHHHHHH-HHHHHHhc-CCCCcceEEEEEcC
Confidence            5678999999999999999999986543       2699998865332 2233333 33455554 68999999888776


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                       ...+++|||++ |+|.+++.......+++..++.++.|++.||+|||+++++||||||+||+++.++.+||+|||++..
T Consensus        73 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~  151 (260)
T cd05073          73 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV  151 (260)
T ss_pred             -CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceee
Confidence             77899999997 6888888765556789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......  .......++..|+|||++..   +.++.++|+|||||++|+|++ |..||.+.+.......+.. ......+
T Consensus       152 ~~~~~~--~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~  225 (260)
T cd05073         152 IEDNEY--TAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMPRP  225 (260)
T ss_pred             ccCCCc--ccccCCcccccccCHhHhcc---CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC-CCCCCCc
Confidence            532211  11112345678999999863   367889999999999999999 9999998876666555442 3334456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ...+.++.+++.+||+.||++||++.+++..|+.
T Consensus       226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         226 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            7789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2e-36  Score=308.37  Aligned_cols=256  Identities=19%  Similarity=0.400  Sum_probs=200.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.+|||.+.....   .....+.++. .++..+ +|+||+.+++.+..
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~------~~~~vK~~~~~~~~~~~~~~~~~~e~-~~l~~~-~h~~i~~~~~~~~~   73 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDG------VPVALKKVQIFDLMDAKARADCIKEI-DLLKQL-NHPNVIKYYASFIE   73 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCC------ceEEEEeeeehhhhhHHHHHHHHHHH-HHHHHc-cCCchhhhhheeEe
Confidence            57899999999999999999987655      4899998764322   1222333332 344444 79999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ++..+++|||++| +|.+++...  ....+++..++.++.||+.||.|||+++++|+||||+||+++.++.++|+|||++
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~  153 (267)
T cd08229          74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhh
Confidence            9999999999985 777776542  2356899999999999999999999999999999999999999999999999988


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhccCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV--EEIYHSVVIKKEKP  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~--~ei~~~i~~~~~~p  274 (632)
                      .......   .......|+..|+|||.+.+.   .++.++|+||||+++|+|++|..||.+...  .+....+......+
T Consensus       154 ~~~~~~~---~~~~~~~~~~~~~ape~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T cd08229         154 RFFSSKT---TAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP  227 (267)
T ss_pred             hccccCC---cccccccCCcCccCHHHhcCC---CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCC
Confidence            7543221   112234689999999998643   578899999999999999999999976543  23333333222222


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ..+...++++.+++.+||+.||.+||++.+|++.++++
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            22356889999999999999999999999999988765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=9.2e-38  Score=310.58  Aligned_cols=253  Identities=21%  Similarity=0.296  Sum_probs=214.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-------hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-------EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-------~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      +.|.-.+.||+|..+.|-++.++.+++      ++|+|++.-..       .....+....+..++.++..||+|+.+++
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~------e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D   90 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGK------EFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD   90 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhccccc------ceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence            456777889999999999998887764      78999885321       12233334455677889999999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      +++++..+|+|.|.|+ |.|.|++...  -.+++...+++++|+..|++|||.++||||||||+|||+|++.++||+|||
T Consensus        91 ~yes~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   91 VYESDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             eccCcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence            9999999999999998 9999999764  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCC---CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      +|+.+...    ......||||+|+|||.+...   ....|+..+|.|++|++||-+|.|.+||......-++..|+.++
T Consensus       169 Fa~~l~~G----ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk  244 (411)
T KOG0599|consen  169 FACQLEPG----EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK  244 (411)
T ss_pred             eeeccCCc----hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc
Confidence            99876432    334567999999999998743   24468899999999999999999999999988777788887665


Q ss_pred             cCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      -...-|  ..++.+.++||++||+.||.+|.|++|.|.
T Consensus       245 yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  245 YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            554444  468899999999999999999999999886

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=5.3e-36  Score=309.98  Aligned_cols=275  Identities=20%  Similarity=0.353  Sum_probs=211.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +|++.+.||.|+||.||+|.+....   ..+..||+|++......   ...+....+..++..+.+|++|+.+++.+..+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~---~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGH---DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD   77 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCC---CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC
Confidence            4899999999999999999875422   23468999998653211   11222333445667777899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..|+||||++ |+|.+++...  ..+++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||++...
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          78 TKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             CeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            99999999998 5787777643  47899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC----HHHHHHHHHhhccCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS----VEEIYHSVVIKKEKPC  275 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~----~~ei~~~i~~~~~~p~  275 (632)
                      .....  .......|+..|+|||.+... ...++.++|+||||+++|+|++|..||....    ..++...+.  ...+.
T Consensus       156 ~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~--~~~~~  230 (290)
T cd05613         156 HEDEV--ERAYSFCGTIEYMAPDIVRGG-DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPP  230 (290)
T ss_pred             ccccc--cccccccCCcccCChhhccCC-CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh--ccCCC
Confidence            32211  122345689999999998643 2346789999999999999999999997432    233333322  23455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      +|..+++.+.+++.+||+.||++||     ++.+++.      ++++....|+.+..+....++
T Consensus       231 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~  288 (290)
T cd05613         231 YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK------HPFFQKINWDDLAAKKVPAPF  288 (290)
T ss_pred             CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc------CcccccCCHHHHhhccCCCCC
Confidence            6788999999999999999999997     5666655      667778888776555444443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=7.2e-36  Score=307.69  Aligned_cols=264  Identities=21%  Similarity=0.362  Sum_probs=197.4

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      ...+|++.+.||+|+||.||+|.......  ..++.||+|.+..........+.++. .++..+ .|+|++.+.+++.. 
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~iv~~~~~~~~~   77 (284)
T cd05081           2 EERHLKFIQQLGKGNFGSVELCRYDPLQD--NTGEVVAVKKLQHSTAEHLRDFEREI-EILKSL-QHDNIVKYKGVCYSA   77 (284)
T ss_pred             ccccceeeeeccCCCCceEEEEEecCCcC--CCCcEEEEEEeccCCHHHHHHHHHHH-HHHHhC-CCCCeeEEEEEEccC
Confidence            34689999999999999999998642111  23358999998765544444444443 445554 79999999987654 


Q ss_pred             -CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 -NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 -~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                       ...+++||||++ |+|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          78 GRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             CCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence             356899999997 6888777543 3468999999999999999999999999999999999999999999999999988


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHH--------------
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI--------------  263 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei--------------  263 (632)
                      ................++..|+|||++.+   +.++.++|+|||||++|||++|..|+........              
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYAPESLTE---SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY  233 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeCHHHhcc---CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchH
Confidence            65322110000111123456999999864   3578899999999999999998777643321100              


Q ss_pred             -HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          264 -YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       264 -~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                       ...+.........+..++.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence             0111222233345677899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=4.9e-36  Score=310.27  Aligned_cols=253  Identities=21%  Similarity=0.297  Sum_probs=197.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||.+......  ....+.+ +..++..+.+|+||+.+++++...
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~v~lK~~~~~~~~~~~~~~~~~-E~~~l~~l~~~~~i~~~~~~~~~~   73 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTG------KLVALKKTRLEMDEEGIPPTALR-EISLLQMLSESIYIVRLLDVEHVE   73 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCC------cEEEEEeehhhccccCCchHHHH-HHHHHHHccCCCCccceeeeEeec
Confidence            47999999999999999999987655      48999987643221  1122333 345667777889999999988776


Q ss_pred             CE-----EEEEEecCCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEE
Q 006772          121 GK-----ICIAMKFYEGSVGDRIAQQR---GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLG  191 (632)
Q Consensus       121 ~~-----l~LVmEy~~GsL~d~l~~~~---~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~  191 (632)
                      +.     .|++|||+++++.+++....   ...+++..++.++.||+.||+|||+++|+||||||+|||++. ++.+||+
T Consensus        74 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~  153 (295)
T cd07837          74 EKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA  153 (295)
T ss_pred             CCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe
Confidence            55     89999999999988886543   246899999999999999999999999999999999999998 8999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++.....   ........+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+..+....+....
T Consensus       154 dfg~~~~~~~~---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  228 (295)
T cd07837         154 DLGLGRAFSIP---VKSYTHEIVTLWYRAPEVLLGS--THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL  228 (295)
T ss_pred             ecccceecCCC---ccccCCcccccCCCChHHhhCC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            99998764321   1112223568899999988632  247889999999999999999999998876554433332111


Q ss_pred             cCC------------------C--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKP------------------C--------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p------------------~--------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+                  .        ....+++++.++|.+||..||.+||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000                  0        01357889999999999999999999999886

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=8.5e-36  Score=304.11  Aligned_cols=253  Identities=26%  Similarity=0.400  Sum_probs=198.3

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--h--hhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--E--DCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +++|++.+.||+|+||.||+|.+..++      +.||||.+....  .  .........+..++..+ +|+||+.+++++
T Consensus         1 ~~~~~~~~~l~~g~~g~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   73 (265)
T cd06652           1 PTNWRLGKLLGQGAFGRVYLCYDADTG------RELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCL   73 (265)
T ss_pred             CCcceEeeEEecCCceEEEEEEEcCCC------cEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEe
Confidence            468999999999999999999987655      489999875321  1  11112223333445555 799999999987


Q ss_pred             EE--CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          118 VI--NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       118 ~~--~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ..  ...++++|||++ |+|.+++...  ..+++..++.++.|++.||+|||+++|+|+||||+|||++.++.++|+|||
T Consensus        74 ~~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg  151 (265)
T cd06652          74 RDPMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG  151 (265)
T ss_pred             ccCCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCc
Confidence            65  357889999998 5777776543  468999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++.................|+..|+|||++.+.   .++.++|+|||||++|||++|+.||...+.......+......+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  228 (265)
T cd06652         152 ASKRLQTICLSGTGMKSVTGTPYWMSPEVISGE---GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP  228 (265)
T ss_pred             cccccccccccccccccCCCCccccChhhhcCC---CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC
Confidence            987643221122223345689999999998743   57889999999999999999999998876555544444344455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..|..++..+.+++++|+. +|++||++++++.
T Consensus       229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            5677888999999999995 9999999999885

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.2e-35  Score=301.81  Aligned_cols=256  Identities=20%  Similarity=0.427  Sum_probs=202.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDC-AKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.++...  ... ...+.+ +..++..+ .|++++.+++.+..
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~-ei~~l~~~-~~~~i~~~~~~~~~   73 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDG------RVVALKKVQIFEMMDAKARQDCLK-EIDLLKQL-DHPNVIKYLASFIE   73 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCC------CEEEEEEeecccccchhhHHHHHH-HHHHHHhC-CCCCeeeeeeeeec
Confidence            58999999999999999999987554      489999886422  111 223333 33444554 78999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ++..+++|||++ |+|.+++...  ....+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~  153 (267)
T cd08224          74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEecccee
Confidence            999999999998 5887777543  2356899999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhccCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--VEEIYHSVVIKKEKP  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--~~ei~~~i~~~~~~p  274 (632)
                      .......   .......|++.|+|||.+.+   ..++.++|+|||||++|+|++|..||....  ..+....+.. ...+
T Consensus       154 ~~~~~~~---~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~  226 (267)
T cd08224         154 RFFSSKT---TAAHSLVGTPYYMSPERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CDYP  226 (267)
T ss_pred             eeccCCC---cccceecCCccccCHHHhcc---CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CCCC
Confidence            7643221   11233468899999999864   357889999999999999999999997653  2233333322 2333


Q ss_pred             CCCC-CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPS-GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~-~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..|. ..+.++.++|.+||..+|++||++.+|++.|+.+.
T Consensus       227 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         227 PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            3444 78889999999999999999999999999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=3.2e-36  Score=318.33  Aligned_cols=253  Identities=14%  Similarity=0.188  Sum_probs=191.9

Q ss_pred             EEeEEccc--CceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           47 LKHRIGRG--PFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        47 l~~~IG~G--~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      +++.||+|  +|++||++.++.++      ..||+|.+..... ......+.++..+++. .+||||+.+++++..++..
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~hpniv~~~~~~~~~~~~   74 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTG------EYVTVRRINLEACTNEMVTFLQGELHVSKL-FNHPNIVPYRATFIADNEL   74 (327)
T ss_pred             hhhhccccccceEEEEEEeecccC------cEEEEEEechhhccHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEEECCEE
Confidence            56789999  78999999988766      4899999865432 2233344444444444 4789999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      |+||||++ |++.+++.......+++..++.++.|++.||+|||+++|+||||||+|||++.++.++++||+.+......
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~  154 (327)
T cd08227          75 WVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH  154 (327)
T ss_pred             EEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence            99999998 67888876554556999999999999999999999999999999999999999999999999865443211


Q ss_pred             CCC----CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-----
Q 006772          203 SLS----DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-----  273 (632)
Q Consensus       203 ~~~----~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-----  273 (632)
                      ...    ........++..|+|||++.+. ...++.++|+|||||++|||++|..||...+..+...........     
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  233 (327)
T cd08227         155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT  233 (327)
T ss_pred             cccccccccccccccceecccChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccc
Confidence            110    0011123567889999998643 235789999999999999999999999876544332222111000     


Q ss_pred             ---------------------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ---------------------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ---------------------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                             ......+++++.+||.+||+.||++|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                                                   0011235678999999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=8.9e-36  Score=300.63  Aligned_cols=247  Identities=22%  Similarity=0.380  Sum_probs=195.2

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      +.||+|+||.||+|.... +      +.||+|.+..............+..++..+ +|+||+.+.+++...+..++|||
T Consensus         1 ~~ig~g~~g~vy~~~~~~-~------~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   72 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKD-K------TPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVME   72 (250)
T ss_pred             CccCCCCCceEEEEEecC-C------cEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEE
Confidence            468999999999998542 2      479999987654332222223333445554 79999999999999999999999


Q ss_pred             cCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCC
Q 006772          129 FYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS  207 (632)
Q Consensus       129 y~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~  207 (632)
                      |++ |+|.+++... ...+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++.........  
T Consensus        73 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--  149 (250)
T cd05085          73 LVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS--  149 (250)
T ss_pred             CCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccc--
Confidence            998 5777666443 356899999999999999999999999999999999999999999999999998754322111  


Q ss_pred             ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006772          208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN  286 (632)
Q Consensus       208 ~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~  286 (632)
                      ......++..|+|||++..   +.++.++|+||||+++|||++ |..||.+.........+. .......+..++.++.+
T Consensus       150 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  225 (250)
T cd05085         150 SSGLKQIPIKWTAPEALNY---GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYK  225 (250)
T ss_pred             cCCCCCCcccccCHHHhcc---CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHH
Confidence            1112234678999999863   467889999999999999998 999999887766655543 34445567789999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          287 VIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       287 LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      ++.+||+.+|++||++.++++.|.
T Consensus       226 li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         226 VMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHcccCcccCCCHHHHHHHhc
Confidence            999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=8.1e-36  Score=310.91  Aligned_cols=248  Identities=19%  Similarity=0.333  Sum_probs=198.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .+|++.+.||+|+||.||+|.+..++      +.||+|.+..........+.++. .++.. ..|+|++.+.+.+..+..
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~e~-~~l~~-~~h~~v~~~~~~~~~~~~   91 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIINEI-LVMRE-NKNPNIVNYLDSYLVGDE   91 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCC------cEEEEEEEecCCcchHHHHHHHH-HHHHh-CCCCCEeeEEEEEEeCCE
Confidence            68999999999999999999976554      48999998754433333333333 34444 479999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++ |+|.+++..   ..+++.++..++.|++.||+|||+++|+||||||+|||++.++.++|+|||++.....
T Consensus        92 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654          92 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             EEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            999999998 577776643   3689999999999999999999999999999999999999999999999998875432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p~~p~~l  280 (632)
                      ..   .......|++.|+|||.+.+   ..++.++|+|||||++|+|++|+.||...........+.... .....+..+
T Consensus       169 ~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T cd06654         169 EQ---SKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL  242 (296)
T ss_pred             cc---cccCcccCCccccCHHHHcC---CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCcccc
Confidence            11   11223468999999999864   357889999999999999999999998877644333332211 122345678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.+.+++.+||..||++||++.+++.
T Consensus       243 ~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         243 SAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             CHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            899999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=7.9e-36  Score=304.85  Aligned_cols=252  Identities=25%  Similarity=0.425  Sum_probs=198.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--h--hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--D--CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+|+..+.||+|+||.||+|.+..++      +.||+|.+.....  .  ........+..++..+ +|+||+.+++++.
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   74 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTG------RELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLR   74 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCC------cEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEE
Confidence            47999999999999999999987655      4899998864321  1  1112223333455555 6999999999876


Q ss_pred             E--CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          119 I--NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       119 ~--~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .  ++.++++|||++ ++|.+.+...  +.+++...+.++.|++.||+|||+++|+||||||+||+++.++.++|+|||+
T Consensus        75 ~~~~~~~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~  152 (266)
T cd06651          75 DRAEKTLTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGA  152 (266)
T ss_pred             cCCCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCC
Confidence            5  367899999998 5777777543  4689999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      ++................++..|+|||++.+.   .++.++|+|||||++|||++|+.||......+...........+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  229 (266)
T cd06651         153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGE---GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQ  229 (266)
T ss_pred             ccccccccccCCccccCCccccccCHHHhCCC---CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCC
Confidence            87653221112222334688999999998643   578899999999999999999999987765554444444445566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|..+++.+.+++ +||..||++||+++|+++
T Consensus       230 ~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         230 LPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            7788899999999 688889999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=5.9e-36  Score=312.72  Aligned_cols=266  Identities=22%  Similarity=0.326  Sum_probs=206.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |..++|+..+.||+|+||.||+|.+..+++.  ....||+|.+..............+..++..+ +|+||+.+++++..
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~   80 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIWVPEGET--VKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLS   80 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEEecCCCc--ceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcC
Confidence            5568899999999999999999998765531  12368999887543322222223333444444 79999999998865


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      . ..+++|||++ |++.+.+... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~-~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~  158 (303)
T cd05110          81 P-TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (303)
T ss_pred             C-CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccc
Confidence            4 5678999998 6888877543 34689999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....... .......++..|+|||++.+   ..++.++|+|||||++|||++ |..||.+....+....+ .....+..+
T Consensus       159 ~~~~~~~-~~~~~~~~~~~y~~PE~~~~---~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~  233 (303)
T cd05110         159 LEGDEKE-YNADGGKMPIKWMALECIHY---RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLPQP  233 (303)
T ss_pred             ccCcccc-cccCCCccccccCCHHHhcc---CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCCCC
Confidence            5322111 11122345778999999863   367889999999999999997 99999887765554433 344455556


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ..++.++.+++.+||..||++||++.++++.|+.+.+.
T Consensus       234 ~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         234 PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            77899999999999999999999999999988876544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-37  Score=315.24  Aligned_cols=253  Identities=25%  Similarity=0.347  Sum_probs=201.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC--chhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~--~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ...|...+.||+|+||.|..|.++.+++      .||||++...  +....++.+++. .++..+ +|+||+.+.+++..
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~------~VAIKKi~~~F~~~~~akRtlREl-klLr~~-~HeNIi~l~di~~p   92 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGE------KVAIKKILNPFENQIDAKRTLREL-KLLRHL-RHENIIGLLDIFRP   92 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCC------EeehhhhhhhhhchHHHHHHHHHH-HHHHHh-cCCCcceEEeeccc
Confidence            3567778999999999999999998774      8999998732  223333333333 445555 49999999998765


Q ss_pred             -----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          120 -----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       120 -----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                           -+.+|+|+|+|+-+|...+...  ..++...+..++.||++||.|+||.+|+||||||+|+|++.+...||+|||
T Consensus        93 ~~~~~f~DvYiV~elMetDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFG  170 (359)
T KOG0660|consen   93 PSRDKFNDVYLVFELMETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFG  170 (359)
T ss_pred             ccccccceeEEehhHHhhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecccc
Confidence                 2679999999988888877543  359999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH------
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV------  268 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~------  268 (632)
                      +|+..... .....++..+-|.+|.|||++..  ...||.+.||||.||++.||++|++.|.|.+....+..|.      
T Consensus       171 LAR~~~~~-~~~~~mTeYVaTRWYRAPElll~--~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP  247 (359)
T KOG0660|consen  171 LARYLDKF-FEDGFMTEYVATRWYRAPELLLN--SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP  247 (359)
T ss_pred             ceeecccc-CcccchhcceeeeeecCHHHHhc--cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence            99987543 22344456678999999999964  4579999999999999999999999999977543333222      


Q ss_pred             ------------------hhccCCCCC-----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 ------------------IKKEKPCIP-----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ------------------~~~~~p~~p-----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                        .....+..|     +..++.+.+|+.+||..||.+|+|++|.|.
T Consensus       248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                              111122222     467899999999999999999999999775

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=4.5e-36  Score=314.72  Aligned_cols=250  Identities=19%  Similarity=0.244  Sum_probs=184.2

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--CCEEEE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--NGKICI  125 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--~~~l~L  125 (632)
                      .++||+|+||.||+|.++...    ..+.||+|.+......  ....+ +..++..+ +|+||+.+++++..  +..+|+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~----~~~~~aiK~~~~~~~~--~~~~~-E~~~l~~l-~h~niv~~~~~~~~~~~~~~~l   77 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGK----DDRDYALKQIEGTGIS--MSACR-EIALLREL-KHPNVISLQKVFLSHADRKVWL   77 (317)
T ss_pred             ccccccCCCeEEEEEEEccCC----CCceEEEEEECCCCCc--HHHHH-HHHHHHhc-CCCCCcceeeeEecCCCcEEEE
Confidence            468999999999999876422    2358999998653321  22223 33445554 78999999988754  467899


Q ss_pred             EEecCCCCHHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE----ecCCcEEEEecC
Q 006772          126 AMKFYEGSVGDRIAQQR-------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL----SEHDQLVLGDFG  194 (632)
Q Consensus       126 VmEy~~GsL~d~l~~~~-------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl----d~~g~vkL~DFG  194 (632)
                      +|||+.+++.+++....       ...+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||
T Consensus        78 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07868          78 LFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence            99999999888875431       2358999999999999999999999999999999999999    456799999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---------HHHH
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---------EIYH  265 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---------ei~~  265 (632)
                      +++................||+.|||||++.+.  ..++.++|+|||||++|||++|+.||.+....         ....
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~  235 (317)
T cd07868         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD  235 (317)
T ss_pred             ceeccCCCCccccccCCccccccccCCHHHcCC--CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHH
Confidence            998754332222233446789999999998643  24788999999999999999999999753311         1111


Q ss_pred             HHHhhccC------------C------------C------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          266 SVVIKKEK------------P------------C------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       266 ~i~~~~~~------------p------------~------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+......            +            .            .....+.++.+||.+||+.||.+|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         236 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             HHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11100000            0            0            00123567889999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-36  Score=304.10  Aligned_cols=254  Identities=21%  Similarity=0.371  Sum_probs=199.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.+++|++...... ... ...+..++.++..|+||+.+++++.... 
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~-~~~-~~~e~~~l~~~~~h~~i~~~~~~~~~~~~   77 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTG------QLVAIKIMDIIEDE-EEE-IKEEYNILRKYSNHPNIATFYGAFIKKNP   77 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCC------cEEEEEEEecCchh-HHH-HHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence            78999999999999999999987654      48999998754432 233 3334455666778999999999987644 


Q ss_pred             -----EEEEEEecCCC-CHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          122 -----KICIAMKFYEG-SVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       122 -----~l~LVmEy~~G-sL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                           .+|++|||+++ +|.+++....  +..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+||
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~  157 (275)
T cd06608          78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDF  157 (275)
T ss_pred             CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCC
Confidence                 58999999995 7777765433  468999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |++.......   .......|+..|+|||++....  ...++.++|+|||||+||+|++|..||...........+....
T Consensus       158 ~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  234 (275)
T cd06608         158 GVSAQLDSTL---GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP  234 (275)
T ss_pred             ccceecccch---hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC
Confidence            9987643211   1123346899999999986431  2346789999999999999999999998766554444433221


Q ss_pred             c-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 E-KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~-~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      . ....+..++.++.++|.+||..||++||++.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         235 PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            1 11122347889999999999999999999999886

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=5.2e-36  Score=309.69  Aligned_cols=279  Identities=21%  Similarity=0.339  Sum_probs=216.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +|++.+.||+|+||.||+|.+....   .....||||++++...   .........+..++..+.+|++|+.+++.+..+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~   77 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGH---DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD   77 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccc---cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC
Confidence            4889999999999999999865432   2235899999865321   111222334445667777899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ...|+||||+. |+|.+.+..  ...+++..++.++.|++.||+|||+.+++||||||+||+++.++.++|+|||+++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          78 TKLHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             CEEEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            99999999998 577777654  347899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC----HHHHHHHHHhhccCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS----VEEIYHSVVIKKEKPC  275 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~----~~ei~~~i~~~~~~p~  275 (632)
                      ....  ........|+..|+|||.+.+. ....+.++|+||||+++|||++|..||....    ..++...+.  ...+.
T Consensus       156 ~~~~--~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~  230 (288)
T cd05583         156 LAEE--EERAYSFCGTIEYMAPEVIRGG-SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL--KSKPP  230 (288)
T ss_pred             cccc--ccccccccCCccccCHHHhcCC-CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH--ccCCC
Confidence            3321  1112234689999999998643 1236789999999999999999999996432    223333332  23455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCc
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSS  335 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~  335 (632)
                      .|..++.++.+++.+||+.||++||++.++...|+   +.++...+|..+.++...+++.
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~  287 (288)
T cd05583         231 FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN---HPFFQGIDWDDLAAKRIPAPFK  287 (288)
T ss_pred             CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc---CcccccCCHHHHhhhccCCCCC
Confidence            67789999999999999999999999887665443   6788899998887777666653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=7.8e-36  Score=307.41  Aligned_cols=255  Identities=21%  Similarity=0.348  Sum_probs=197.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE---
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV---  118 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~---  118 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.+|+|++...... ...+ ..+..++..+.+|+|++.+++++.   
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~-~~~~-~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNKKNG------SKAAVKILDPIHDI-DEEI-EAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEECCCC------ceeEEEeeccccch-HHHH-HHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            378999999999999999999987654      48999988653322 1222 333345666668999999999874   


Q ss_pred             --ECCEEEEEEecCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          119 --INGKICIAMKFYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       119 --~~~~l~LVmEy~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                        .++..+++|||++ |+|.+.+...  ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+||
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~df  168 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDF  168 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccC
Confidence              3467999999998 5677666432  2357899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |+++......   .......|++.|+|||++...  ....++.++|+|||||++|||++|+.||...+.......+....
T Consensus       169 g~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~  245 (286)
T cd06638         169 GVSAQLTSTR---LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP  245 (286)
T ss_pred             CceeecccCC---CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC
Confidence            9987653221   112234689999999998532  12357889999999999999999999998776544333322111


Q ss_pred             -cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 -EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 -~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                       .....|..++.++.++|.+||+.||++||++.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  282 (286)
T cd06638         246 PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ  282 (286)
T ss_pred             CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence             112234567889999999999999999999999987

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-37  Score=305.39  Aligned_cols=270  Identities=22%  Similarity=0.303  Sum_probs=206.9

Q ss_pred             CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           35 QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        35 ~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ....+|+.++|++.++||+|||..||++....+.      +.||+|++...+.+..+...++ ....+++ +|||+.++.
T Consensus        13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~------~~YAlKkI~c~~~~~~e~~~rE-id~~rkf-~s~~vl~l~   84 (302)
T KOG2345|consen   13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTG------HLYALKKILCHSQEDIEEALRE-IDNHRKF-NSPNVLRLV   84 (302)
T ss_pred             CCcEEEcCceEEEeeeecCCCceeeeeecccCcc------cchhhheeeccchHHHHHHHHH-HHHHHhh-CCcchHHHH
Confidence            4456899999999999999999999999866554      5899999977664444443333 2334444 679988876


Q ss_pred             EEEEE-----CCEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEec
Q 006772          115 GISVI-----NGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLSE  184 (632)
Q Consensus       115 ~~~~~-----~~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld~  184 (632)
                      +....     .+..||+++|+. |+|.|.+...+  +..+++.+.+.|+.+|++||++||+..  +.||||||.|||+++
T Consensus        85 dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~  164 (302)
T KOG2345|consen   85 DHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD  164 (302)
T ss_pred             HHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence            55433     356999999997 99999998764  347899999999999999999999998  999999999999999


Q ss_pred             CCcEEEEecCCceeccCCCCCCC------ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC
Q 006772          185 HDQLVLGDFGIPYLLLGRSLSDS------DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK  258 (632)
Q Consensus       185 ~g~vkL~DFGlak~~~~~~~~~~------~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~  258 (632)
                      ++.++|.|||.+....-.-....      +-.....|..|.|||.+.-+.+..++.++|||||||+||+|+.|..||...
T Consensus       165 ~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~  244 (302)
T KOG2345|consen  165 SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI  244 (302)
T ss_pred             CCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH
Confidence            99999999998765421111111      112234689999999998877788899999999999999999999999642


Q ss_pred             CH--HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          259 SV--EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       259 ~~--~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      -.  ..+...+...+...+.....|..+.++|..||+.||.+||++.+++..++.+
T Consensus       245 ~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  245 YQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             hhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            11  0011111111111122245899999999999999999999999999887654

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=9.6e-36  Score=307.78  Aligned_cols=255  Identities=18%  Similarity=0.361  Sum_probs=194.2

Q ss_pred             EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHh--hhccCCCceeEeeEEEEECCEEEE
Q 006772           50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELF--PKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        50 ~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il--~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      .||+|+||.||+|.+..++      +.||+|.+.+...  ........++..++  ....+|++++.+++.+..++..++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l   74 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCF   74 (279)
T ss_pred             CcccCCCeEEEEEEECCCC------cEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEE
Confidence            3899999999999987654      4899999865321  11111111222222  223478999999999998999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||+.| +|.+++..  .+.+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||++......  
T Consensus        75 v~e~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--  150 (279)
T cd05633          75 ILDLMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--  150 (279)
T ss_pred             EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--
Confidence            9999984 66666543  357999999999999999999999999999999999999999999999999998654221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhccCCCCCCCCCH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE--EIYHSVVIKKEKPCIPSGLPP  282 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~--ei~~~i~~~~~~p~~p~~lp~  282 (632)
                         ......||+.|+|||.+..  ...++.++|+|||||++|||++|..||......  ...... .......+|..+++
T Consensus       151 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  224 (279)
T cd05633         151 ---KPHASVGTHGYMAPEVLQK--GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSP  224 (279)
T ss_pred             ---CccCcCCCcCccCHHHhcC--CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCH
Confidence               1223468999999999853  224788999999999999999999999764321  111111 11234456778999


Q ss_pred             HHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccc
Q 006772          283 AVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       283 ~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                      ++.++|.+||..||.+||     +++++++      ++++.+.+|....
T Consensus       225 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~------h~~~~~~~~~~~~  267 (279)
T cd05633         225 ELKSLLEGLLQRDVSKRLGCLGRGAQEVKE------HVFFKGIDWQQVY  267 (279)
T ss_pred             HHHHHHHHHhcCCHHHhcCCCCCCHHHHHh------CccccCCCHhHHh
Confidence            999999999999999999     5888766      6677777776543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=6.3e-36  Score=305.71  Aligned_cols=253  Identities=20%  Similarity=0.298  Sum_probs=189.9

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||+|......    ....+|+|.+....... ...+.++ ...+.. .+|+||+.+++.+...+..|+||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e-~~~~~~-l~h~nii~~~~~~~~~~~~~lv~   74 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGM----SKARVVVKELRASATPDEQLLFLQE-VQPYRE-LNHPNVLQCLGQCIESIPYLLVL   74 (269)
T ss_pred             CcCCccCCceEEEEEEecCC----CCeEEEEeecCccCChHHHHHHHHH-HHHHHh-CCCCCcceEEEEECCCCceEEEE
Confidence            36999999999999754321    23478999876433222 2233333 233444 47999999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          128 KFYE-GSVGDRIAQQRG---GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~---~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      ||+. |+|.+++.....   ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus        75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  154 (269)
T cd05042          75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED  154 (269)
T ss_pred             EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch
Confidence            9998 688888765432   335678889999999999999999999999999999999999999999999986532221


Q ss_pred             CCCCccccccCCCccCCccccCCC----CCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcc----CC
Q 006772          204 LSDSDMALRLGTPNYMAPEQWEPE----VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE----KP  274 (632)
Q Consensus       204 ~~~~~~~~~~GT~~YmAPE~~~~~----~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~----~p  274 (632)
                      ... ......+++.|+|||++...    ....++.++|+|||||++|||++ |..||......+....+.....    .+
T Consensus       155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  233 (269)
T cd05042         155 YYI-TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKP  233 (269)
T ss_pred             hee-ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCC
Confidence            111 11223457789999997531    12346789999999999999999 8889988776665554443221    23


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ..+..++..+.+++..|| .||++||++++|++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         234 QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            345578899999999999 5999999999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=9.7e-36  Score=300.17  Aligned_cols=255  Identities=25%  Similarity=0.439  Sum_probs=203.8

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKIC  124 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~  124 (632)
                      +++.+.||+|+||.||+|.+...+.  .....||+|++..............+...+..+ +|++++.+++++..++..+
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   77 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSG--EKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM   77 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCC--CCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence            4678999999999999999876441  123589999997654432222333344555565 8999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          125 IAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       125 LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      ++|||++ ++|.+.+.......+++..+..++.|++.||+|||+++++|+||||+||++++++.++|+|||+++......
T Consensus        78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            9999998 577777765433338999999999999999999999999999999999999999999999999987654321


Q ss_pred             CCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCH
Q 006772          204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP  282 (632)
Q Consensus       204 ~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~  282 (632)
                      .....  ...+++.|+|||.+.   ...++.++|+|||||++|+|++ |..||...+..+....+.. ...+..+..++.
T Consensus       158 ~~~~~--~~~~~~~y~~Pe~~~---~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~  231 (258)
T smart00219      158 YYKKK--GGKLPIRWMAPESLK---DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKK-GYRLPKPENCPP  231 (258)
T ss_pred             ccccc--cCCCcccccChHHhc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-CCCCCCCCcCCH
Confidence            11111  123678999999985   3467899999999999999998 8999988877777666553 344556777999


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          283 AVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       283 ~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      ++.+++.+||..||++||++.++++.
T Consensus       232 ~~~~~i~~~l~~~p~~Rpt~~~ll~~  257 (258)
T smart00219      232 EIYKLMLQCWAEDPEDRPTFSELVEI  257 (258)
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHHhh
Confidence            99999999999999999999998874

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-37  Score=339.24  Aligned_cols=266  Identities=20%  Similarity=0.366  Sum_probs=223.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..||++...+.+.||.|.||+|++|+.+..+   +....||||.|+.-..+..+.-+-.+..|+-+. .||||++|.|+-
T Consensus       624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pg---kre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVV  699 (996)
T KOG0196|consen  624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPG---KREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVV  699 (996)
T ss_pred             hhcChhheEEEEEEecccccceecccccCCC---CcceeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEE
Confidence            4588899999999999999999999988765   345689999998755444443333344555554 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      +....++||+|||+ |+|..++ +.+.+.|+..+..-+++.|+.|+.||-+.++|||||..+|||++.+-.+|++|||++
T Consensus       700 Tks~PvMIiTEyMENGsLDsFL-R~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLS  778 (996)
T KOG0196|consen  700 TKSKPVMIITEYMENGSLDSFL-RQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLS  778 (996)
T ss_pred             ecCceeEEEhhhhhCCcHHHHH-hhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccce
Confidence            99999999999998 5655544 555678999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccC--CCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          197 YLLLGRSLSDSDMALRLG--TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~G--T~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +.+....  ...+++.-|  .++|.|||.+.   +.++|.+|||||||++|||.++ |+.||..++..+....|..+. +
T Consensus       779 Rvledd~--~~~ytt~GGKIPiRWTAPEAIa---~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy-R  852 (996)
T KOG0196|consen  779 RVLEDDP--EAAYTTLGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY-R  852 (996)
T ss_pred             eecccCC--CccccccCCccceeecChhHhh---hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc-C
Confidence            9764432  222333333  57999999996   6689999999999999999877 999999999999888887554 4


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+-|..||..|.+||..||++|-.+||.+.+|+..|+++.+
T Consensus       853 LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  853 LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            44589999999999999999999999999999999988764

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.5e-36  Score=309.50  Aligned_cols=252  Identities=22%  Similarity=0.409  Sum_probs=198.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+..... .....+.++ ..++..+ +|+||+.+++.+..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~e-~~~l~~~-~~~~i~~~~~~~~~~~   72 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTG------VTMAMKEIRLELDESKFNQIIME-LDILHKA-VSPYIVDFYGAFFIEG   72 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCC------cEEEEEEeecccCHHHHHHHHHH-HHHHHhc-CCCcHHhhhhheecCC
Confidence            47999999999999999999987655      4899998865322 222333333 3444554 7899999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEG-SVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..|+||||++| +|..++.... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  152 (286)
T cd06622          73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGN  152 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence            99999999996 5555443321 2478999999999999999999997 5999999999999999999999999999865


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCC---CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hhccC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEV---RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--IKKEK  273 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~--~~~~~  273 (632)
                      ....     ......|++.|+|||++.+..   ...++.++|+|||||++|||++|..||...........+.  .....
T Consensus       153 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd06622         153 LVAS-----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP  227 (286)
T ss_pred             ccCC-----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC
Confidence            4221     122346788999999985431   2346889999999999999999999998765544333221  22344


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++..++.++.++|.+||+.||.+||++.+++.
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            5677789999999999999999999999999886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-38  Score=310.26  Aligned_cols=249  Identities=20%  Similarity=0.300  Sum_probs=204.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|.|+.||++.+..++      +.+|+|++....  ... .+.+.++..+ -+..+||||+.++.....
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg------~~fa~kiin~~k~~~~~-~e~l~rEarI-C~~LqHP~IvrL~~ti~~   81 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINTKKLSARD-FQKLEREARI-CRKLQHPNIVRLHDSIQE   81 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccch------HHHHHHHhhhhhhcccc-HHHHHHHHHH-HHhcCCCcEeehhhhhcc
Confidence            367999999999999999999988766      478888875321  222 2223444344 344589999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC---CcEEEEecCC
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH---DQLVLGDFGI  195 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~---g~vkL~DFGl  195 (632)
                      .+..|||+|+|.| +|..-+...  --+++..+-.|++||+.+|.|+|+++|||||+||+|+||...   .-+||+|||+
T Consensus        82 ~~~~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGv  159 (355)
T KOG0033|consen   82 ESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGL  159 (355)
T ss_pred             cceeEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccce
Confidence            9999999999996 555545443  357899999999999999999999999999999999999743   3589999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      |..+.+    ......+.|||.|||||++..   .+|+..+|+|+.|++||-+|.|.+||.+.+...++++|+...-..+
T Consensus       160 Ai~l~~----g~~~~G~~GtP~fmaPEvvrk---dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~  232 (355)
T KOG0033|consen  160 AIEVND----GEAWHGFAGTPGYLSPEVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP  232 (355)
T ss_pred             EEEeCC----ccccccccCCCcccCHHHhhc---CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC
Confidence            987752    233456789999999999984   4899999999999999999999999999999999999986544332


Q ss_pred             --CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 --IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 --~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                        .-+.++++.++|+++||..||.+|.|+.|.|+
T Consensus       233 ~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  233 SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence              23678999999999999999999999999775

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.5e-36  Score=320.93  Aligned_cols=248  Identities=21%  Similarity=0.285  Sum_probs=193.1

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||.+......  ....+.+ +..++..+ +|+||+.+++++.
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~~   84 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLR------QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHM-KHENVIGLLDVFT   84 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCC------CEEEEEEeCchhhhhHHHHHHHH-HHHHHHhc-CCCchhhhhhhhc
Confidence            3578999999999999999999987655      48999998653221  1222333 33444444 6899999988775


Q ss_pred             EC------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          119 IN------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       119 ~~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ..      ...|++|+++.++|.+.+.   ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~D  161 (343)
T cd07878          85 PATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILD  161 (343)
T ss_pred             ccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcC
Confidence            43      4579999999888877663   34799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++....      ......||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       162 fg~~~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  233 (343)
T cd07878         162 FGLARQADD------EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVG  233 (343)
T ss_pred             CccceecCC------CcCCccccccccCchHhcCC--ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC
Confidence            999876432      22345789999999998642  3578899999999999999999999988765443333321100


Q ss_pred             ---------------------CCCCC--------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 ---------------------KPCIP--------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ---------------------~p~~p--------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                           .+..+        ...++.+.+||.+||+.||.+|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         234 TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                                 01111        245677899999999999999999999886

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.5e-36  Score=321.31  Aligned_cols=246  Identities=20%  Similarity=0.291  Sum_probs=188.9

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +...+|++.+.||+|+||.||+|.+..++      ..||+|+..+...      . .+..++..+ +|+||+.+++++..
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~valK~~~~~~~------~-~E~~~l~~l-~h~~iv~~~~~~~~  128 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQP------DPVVLKIGQKGTT------L-IEAMLLQNV-NHPSVIRMKDTLVS  128 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCC------ceEEEEeCCcccc------H-HHHHHHHhC-CCCCCcChhheEEe
Confidence            44467999999999999999999987654      4899998543221      1 122344444 78999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++..|+||||+.|+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       129 ~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        129 GAITCMVLPHYSSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             CCeeEEEEEccCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            9999999999999999888653 457999999999999999999999999999999999999999999999999998743


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCC-CCCCH--H-------HHHHHHHh
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW-FGKSV--E-------EIYHSVVI  269 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF-~~~~~--~-------ei~~~i~~  269 (632)
                      ...    .......||+.|+|||++.+   ..++.++|+|||||++|||+++..|+ .....  .       .....+..
T Consensus       208 ~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~  280 (357)
T PHA03209        208 VVA----PAFLGLAGTVETNAPEVLAR---DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIIS  280 (357)
T ss_pred             ccC----cccccccccccccCCeecCC---CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHH
Confidence            211    12234568999999999974   36889999999999999999865554 33211  0       00111110


Q ss_pred             h-c-cCCCCC------------------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 K-K-EKPCIP------------------------------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~-~-~~p~~p------------------------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      . . ....++                              ..++.++.+||.+||+.||.+|||+.|+++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        281 TLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             HhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence            0 0 011111                              245677888999999999999999999886

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.1e-35  Score=311.55  Aligned_cols=248  Identities=20%  Similarity=0.346  Sum_probs=194.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..+|+|.+..............+..++..+ +|+||+.+++++..++.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   73 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSG------LIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGE   73 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCC------eEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCE
Confidence            47999999999999999999987665      379999886543222222222333455555 78999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +|++|||++| +|.+++...  +.+++..+..++.|++.||.|||+ .+++||||||+|||++.++.++|+|||++....
T Consensus        74 ~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615          74 ISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             EEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            9999999984 777776543  578999999999999999999998 589999999999999999999999999886542


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI-----------  269 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~-----------  269 (632)
                      ..     ......|+..|+|||.+.+   ..++.++|+|||||++|+|++|..||...+.......+..           
T Consensus       152 ~~-----~~~~~~~~~~~~aPE~~~~---~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (308)
T cd06615         152 DS-----MANSFVGTRSYMSPERLQG---THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESH  223 (308)
T ss_pred             cc-----ccccCCCCcCccChhHhcC---CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCc
Confidence            21     1234578999999999864   3578899999999999999999999976553332211110           


Q ss_pred             ------------------------hccCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 ------------------------KKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ------------------------~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                              ....+..| ..++.++.+++.+||..||++||++.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  286 (308)
T cd06615         224 RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK  286 (308)
T ss_pred             ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                                    01112222 236789999999999999999999999886

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=2.8e-36  Score=310.42  Aligned_cols=250  Identities=19%  Similarity=0.288  Sum_probs=193.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      ..||+|.+.......  ...+.+ +..++..+ +|+|++.+++++...+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g------~~~~~k~~~~~~~~~~~~~~~~~-ei~~l~~l-~h~~i~~~~~~~~~~~   72 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETH------EIVALKRVRLDDDDEGVPSSALR-EICLLKEL-KHKNIVRLYDVLHSDK   72 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCC------cEEEEEEeecccccccCccchhH-HHHHHHhc-CCCCeeeHHHHhccCC
Confidence            5899999999999999999987665      489999986432211  112222 33444444 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .++++|||+.+++.+.+... .+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.++|+|||+++....
T Consensus        73 ~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  151 (284)
T cd07839          73 KLTLVFEYCDQDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGI  151 (284)
T ss_pred             ceEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence            99999999999998887653 35799999999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCC-CCCHHHHHHHHHhhcc--------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKKE--------  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~-~~~~~ei~~~i~~~~~--------  272 (632)
                      .   ........+++.|+|||++.+.  ..++.++|+|||||++|||++|..||. +.+..+.+..+.....        
T Consensus       152 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
T cd07839         152 P---VRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP  226 (284)
T ss_pred             C---CCCcCCCccccCCcChHHHhCC--cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence            1   1112234578999999998643  246889999999999999999888854 4444433333221000        


Q ss_pred             ----------CCC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 ----------KPC---------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ----------~p~---------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                .+.         ....+++++.++|.+||+.||.+|||+++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                      000         11347889999999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.3e-36  Score=305.64  Aligned_cols=247  Identities=24%  Similarity=0.371  Sum_probs=201.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||.|+||.||+|.+..++      ..||+|.+..... .....+. .+..++..+ +|+|++.+.+.+..+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~-~e~~~l~~l-~h~~i~~~~~~~~~~~   72 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTN------QVVAIKVIDLEEAEDEIEDIQ-QEIQFLSQC-RSPYITKYYGSFLKGS   72 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCC------eEEEEEEeeccccchHHHHHH-HHHHHHHHc-CCCCeeeeeEEEEECC
Confidence            47899999999999999999987655      4899999865432 2222333 333444555 5999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+|+||+.| +|.+++..   .++++..++.++.|++.||.|||+++++|+||+|+||++++++.++|+|||+++...
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  149 (274)
T cd06609          73 KLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLT  149 (274)
T ss_pred             eEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeec
Confidence            99999999985 77777653   278999999999999999999999999999999999999999999999999997764


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC-
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG-  279 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~-  279 (632)
                      ...   .......|++.|+|||++.+.   .++.++|+|||||++|+|++|..||...++.+....+. ....+..+.. 
T Consensus       150 ~~~---~~~~~~~~~~~y~~PE~~~~~---~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~  222 (274)
T cd06609         150 STM---SKRNTFVGTPFWMAPEVIKQS---GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP-KNNPPSLEGNK  222 (274)
T ss_pred             ccc---cccccccCCccccChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh-hcCCCCCcccc
Confidence            321   122335688999999998743   58899999999999999999999998877665554443 2344445555 


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++.+++.+||..||++||++.++++
T Consensus       223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         223 FSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            8999999999999999999999999886

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.7e-35  Score=298.11  Aligned_cols=250  Identities=22%  Similarity=0.345  Sum_probs=205.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||.|+||.||.+.+..++      +.+++|.+....  ......+.+ +..++.++ +|+||+.+++++..++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~-e~~~l~~~-~h~~i~~~~~~~~~~~   72 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDD------SLVVWKEVNLTRLSEKERRDALN-EIVILSLL-QHPNIIAYYNHFMDDN   72 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCC------cEEEEEEEeecccchhHHHHHHH-HHHHHHhC-CCCCeeEEEeEEecCC
Confidence            5899999999999999999987655      479999876432  222233333 33455554 7899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .++++|||++ |+|.+.+.......+++.++..++.|++.||.|||+.+++|+||||+||++++++.+||+|||++....
T Consensus        73 ~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~  152 (256)
T cd08221          73 TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILG  152 (256)
T ss_pred             eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence            9999999998 588888876545678999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ...   .......|++.|+|||++.+.   .++.++|+||||+++|||++|..||...+..+....+... .....+..+
T Consensus       153 ~~~---~~~~~~~~~~~y~ape~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  225 (256)
T cd08221         153 SEY---SMAETVVGTPYYMSPELCQGV---KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG-NYTPVVSVY  225 (256)
T ss_pred             ccc---ccccccCCCccccCHhhcCCC---CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-CCCCCcccc
Confidence            322   122345689999999998643   4678999999999999999999999988877776666533 333445778


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      +.++.+++.+||..||.+||++.++++.
T Consensus       226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         226 SSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            9999999999999999999999998873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=6.7e-36  Score=308.11  Aligned_cols=246  Identities=22%  Similarity=0.356  Sum_probs=187.1

Q ss_pred             EEcccCceEEEEEEEcCCCC------------------CcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee
Q 006772           50 RIGRGPFGDVWLATHHQSAD------------------DFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        50 ~IG~G~FG~VylA~~~~~~~------------------~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      .||+|+||.||+|.....+.                  .......||+|++..........+.++ ..++.. .+|+||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~-~~~~~~-l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFET-ASLMSQ-VSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHH-HHHHhc-CCCCCee
Confidence            59999999999998643211                  112234699999865443333333333 344444 4789999


Q ss_pred             EeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-----
Q 006772          112 WLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-----  186 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-----  186 (632)
                      ++++++..+...++||||++|..++.+.....+.+++..+..++.||+.||+|||+++|+||||||+|||++..+     
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            999999999999999999996544544444456899999999999999999999999999999999999998654     


Q ss_pred             --cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHH-hCCCCCCCCCHHHH
Q 006772          187 --QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML-TGIQPWFGKSVEEI  263 (632)
Q Consensus       187 --~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Eml-tG~~PF~~~~~~ei  263 (632)
                        .+|++|||++......       ....++..|+|||.+.+.  ..++.++|+|||||++|||+ +|..||......+.
T Consensus       160 ~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  230 (274)
T cd05076         160 SPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGG--NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK  230 (274)
T ss_pred             cceeeecCCccccccccc-------cccccCCcccCchhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence              4899999987543211       123568889999988642  35788999999999999995 69999988765554


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ....   ......|...++++.++|.+||+.+|++||++.++++.|
T Consensus       231 ~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         231 ERFY---EKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHH---HhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            3222   123345566778999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.8e-35  Score=309.37  Aligned_cols=248  Identities=20%  Similarity=0.323  Sum_probs=200.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +.|++.+.||+|+||.||+|.+..++      +.||+|.+.....   .....+.++ ..++..+ +|+|++.+.+++..
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~~E-i~~l~~l-~h~niv~~~~~~~~   86 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTN------EVVAIKKMSYSGKQSNEKWQDIIKE-VRFLQQL-RHPNTIEYKGCYLR   86 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCC------cEEEEEEEeccccCcHHHHHHHHHH-HHHHHhC-CCCCEEEEEEEEEe
Confidence            56999999999999999999987654      4899999864322   222233333 3444554 79999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++..|+||||+.|++.+.+... ...+++..+..++.|++.||.|||+.+|+||||+|+||++++++.++|+|||++...
T Consensus        87 ~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~  165 (307)
T cd06607          87 EHTAWLVMEYCLGSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLV  165 (307)
T ss_pred             CCeEEEEHHhhCCCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceec
Confidence            9999999999999998887654 357899999999999999999999999999999999999999999999999998654


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC-CC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI-PS  278 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~-p~  278 (632)
                      ..       .....|++.|+|||++.+...+.++.++|+||||+++|||++|..||.+.+.......+.. ...+.. +.
T Consensus       166 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~  237 (307)
T cd06607         166 SP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDSPTLSSN  237 (307)
T ss_pred             CC-------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CCCCCCCch
Confidence            22       1234678899999998543345688899999999999999999999988776554443332 223332 34


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++.++.++|.+||+.||++||++.+++.
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         238 DWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             hhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            57889999999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=1.1e-35  Score=309.09  Aligned_cols=258  Identities=23%  Similarity=0.406  Sum_probs=203.3

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...++.++|++.+.||+|+||.||+|.+..++      +.||||.++.... .....+..+. .++.+...|+||+.+++
T Consensus         9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~i~~~~~   81 (296)
T cd06618           9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTG------HVMAVKQMRRTGNKEENKRILMDL-DVVLKSHDCPYIVKCYG   81 (296)
T ss_pred             eccCCcchheeeeEeeccCCeEEEEEEECCCC------eEEEEEEEeccCChHHHHHHHHHH-HHHHhccCCCchHhhhe
Confidence            34567799999999999999999999987654      4899999975432 2233333433 34455667999999999


Q ss_pred             EEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..+...|++|||+.+.+.+++... ...+++..+..++.|++.||+|||+ .+|+||||+|+||++++++.+||+|||
T Consensus        82 ~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg  160 (296)
T cd06618          82 YFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFG  160 (296)
T ss_pred             eeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccc
Confidence            99999999999999998877776553 3589999999999999999999997 599999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCC-CCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhcc
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKE  272 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~  272 (632)
                      ++..+....    ......++..|+|||.+.+.. .+.++.++|+||||+++|||++|+.||..... .+.+..+.. ..
T Consensus       161 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~  235 (296)
T cd06618         161 ISGRLVDSK----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ-EE  235 (296)
T ss_pred             cchhccCCC----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc-CC
Confidence            987543211    112235788999999987442 34578899999999999999999999976433 333333332 22


Q ss_pred             CCCCCC--CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPS--GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~--~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+..+.  .++.++.+++.+||..||.+||++.+++.
T Consensus       236 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         236 PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            333332  47899999999999999999999999886

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.6e-35  Score=303.09  Aligned_cols=255  Identities=19%  Similarity=0.238  Sum_probs=189.5

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      +.||+|+||.||+|.+....    ....+|+|.+.............++..++..+ +|+||+.+++.+......++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGY----TPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCC----CceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEE
Confidence            46899999999999865321    23479999987544322222223333444554 78999999999988889999999


Q ss_pred             cCC-CCHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          129 FYE-GSVGDRIAQQRG---GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       129 y~~-GsL~d~l~~~~~---~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      |++ |+|.+++.....   ..+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||+++.......
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~  155 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY  155 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence            998 677777764321   2456778889999999999999999999999999999999999999999999865322211


Q ss_pred             CCCccccccCCCccCCccccCCCCC----CCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc----cCCC
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVR----GPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKK----EKPC  275 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~----g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~----~~p~  275 (632)
                       ........|+..|+|||++.....    ..++.++|+|||||++|||++ |..||......+.........    ..+.
T Consensus       156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (269)
T cd05087         156 -YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR  234 (269)
T ss_pred             -eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence             111123457889999999863211    235789999999999999996 999998776655443322211    1122


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      .....++.+.+++.+|| .+|++||++++|+..|+
T Consensus       235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            33457889999999999 68999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.8e-35  Score=309.15  Aligned_cols=268  Identities=22%  Similarity=0.351  Sum_probs=205.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..+.      +.||+|.+.+.....  ....+.++..++.. .+|+||+.+++.+..+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~   73 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETR------QRFAMKKINKQNLILRNQIQQVFVERDILTF-AENPFVVSMFCSFETK   73 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCC------cEEEEEEeehhhhhhHHHHHHHHHHHHHHHh-CCCCCeeeeEEEEecC
Confidence            47999999999999999999987655      489999986543211  11122223333443 4789999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +.+++||||++| +|.+++...  +.+++..+..++.|++.||+|||+++++||||||+|||++.++.++|+|||+++..
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~  151 (305)
T cd05609          74 RHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIG  151 (305)
T ss_pred             CEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCcccc
Confidence            999999999985 666666442  57899999999999999999999999999999999999999999999999998642


Q ss_pred             cCCCCC------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          200 LGRSLS------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       200 ~~~~~~------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      ......            ........|+..|+|||.+..   ..++.++|+|||||++|||++|..||.+.+..+....+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~  228 (305)
T cd05609         152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR---QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV  228 (305)
T ss_pred             CcCccccccccccccchhhccccCCccCccccCchhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            111000            001112457889999999864   36789999999999999999999999998887776665


Q ss_pred             Hhhcc-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcccc
Q 006772          268 VIKKE-KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGL  325 (632)
Q Consensus       268 ~~~~~-~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~  325 (632)
                      ..... .+..+..+|+++.++|.+||+.||++||++.++.+.++   ++++...+|...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~---~~~~~~~~~~~~  284 (305)
T cd05609         229 ISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ---HRFFLGLDWNGL  284 (305)
T ss_pred             HhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh---CccccCCCHHHH
Confidence            53321 22233468999999999999999999998655444333   566766777653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2.2e-35  Score=298.85  Aligned_cols=253  Identities=22%  Similarity=0.422  Sum_probs=200.9

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |++.+|++.+.||+|+||.||+|.+...       +.+|+|.+...... ...+..+. .++..+ .|++++.+++++..
T Consensus         1 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~-------~~~~~k~~~~~~~~-~~~~~~e~-~~l~~l-~~~~i~~~~~~~~~   70 (256)
T cd05112           1 IHPSELTLVQEIGSGQFGLVWLGYWLEK-------RKVAIKTIREGAMS-EEDFIEEA-QVMMKL-SHPKLVQLYGVCTE   70 (256)
T ss_pred             CChhHeEEEeeecCcccceEEEEEEeCC-------CeEEEEECCCCCCC-HHHHHHHH-HHHHhC-CCCCeeeEEEEEcc
Confidence            4678999999999999999999987532       37999988643322 23344433 444444 68999999999998


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ....+++|||+.| +|.+++.. ..+.+++..++.++.|++.||+|||+++++||||||+||+++.++.++|+|||++..
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~  149 (256)
T cd05112          71 RSPICLVFEFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRF  149 (256)
T ss_pred             CCceEEEEEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceee
Confidence            8999999999985 66666543 335789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .......  ......++..|+|||++.+   +.++.++|+||||+++|||++ |..||......+....+.. ...+..|
T Consensus       150 ~~~~~~~--~~~~~~~~~~~~aPe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  223 (256)
T cd05112         150 VLDDQYT--SSTGTKFPVKWSSPEVFSF---SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA-GFRLYKP  223 (256)
T ss_pred             cccCccc--ccCCCccchhhcCHhHhcc---CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC-CCCCCCC
Confidence            5322111  1112234678999999864   367889999999999999998 9999988777766665542 2334446


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ...+.++.+++.+||+.+|++||++.++++.|
T Consensus       224 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         224 RLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            67899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=6.7e-36  Score=304.83  Aligned_cols=255  Identities=25%  Similarity=0.401  Sum_probs=198.9

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||+|.+............+|||.+..... .....+.++ ..++..+ +|+||+.+++++..++..+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKE-AHLMSNF-NHPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHH-HHHHHhc-CCCCeeeEeeeecCCCCeEEEE
Confidence            368999999999998865432223335799998865332 223333333 3344444 7999999999999899999999


Q ss_pred             ecCC-CCHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-----cEEEEecCCc
Q 006772          128 KFYE-GSVGDRIAQQR-----GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-----QLVLGDFGIP  196 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~-----~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-----~vkL~DFGla  196 (632)
                      ||++ |+|.+++....     ...+++.+++.++.|++.||+|||+++++|+||||+|||++.++     .++|+|||++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            9998 68888876532     23478899999999999999999999999999999999999888     8999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +........ .......++..|+|||++.+   +.++.++|+|||||++|||++ |..||...+..+....+. ....+.
T Consensus       159 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~  233 (269)
T cd05044         159 RDIYKSDYY-RKEGEGLLPVRWMAPESLLD---GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AGGRLQ  233 (269)
T ss_pred             ccccccccc-ccCcccCCCccccCHHHHcc---CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cCCccC
Confidence            755322111 11122345789999999863   468899999999999999998 999998877666655443 234455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      .+..+|.++.++|.+||+.+|.+||++.++++.|+
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         234 KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            67788999999999999999999999999998775

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.1e-35  Score=299.72  Aligned_cols=254  Identities=22%  Similarity=0.334  Sum_probs=200.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||.|+||+||+|.+..++      ..+|+|++...... ....+.++ ...+..+ .|++++.+++.+..++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~~~   72 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNN------EKVAIKRIDLEKCQTSVDELRKE-VQAMSQC-NHPNVVKYYTSFVVGD   72 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCC------cEEEEEEeccCCcchHHHHHHHH-HHHHHhc-CCCCEEEEEEEEeeCC
Confidence            47999999999999999999976544      48999998653322 22333333 3344444 7899999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ..+++|||++| +|.+++..... ..+++..+..++.|++.||+|||+.+|+||||||+||++++++.++|+|||++..+
T Consensus        73 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~  152 (267)
T cd06610          73 ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASL  152 (267)
T ss_pred             EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence            99999999985 77777755432 57899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCC-CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC-
Q 006772          200 LGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP-  277 (632)
Q Consensus       200 ~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p-  277 (632)
                      ....... .......|+..|+|||++...  ..++.++|+|||||++|||++|+.||...+..+.+...... ..+.++ 
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~  229 (267)
T cd06610         153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLET  229 (267)
T ss_pred             ccCccccccccccccCChhhcChHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCC
Confidence            4332211 112334689999999998643  25788999999999999999999999887766555554432 222222 


Q ss_pred             ----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 ----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                          ..+++++.+++.+||+.||++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                257899999999999999999999999886

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-35  Score=328.78  Aligned_cols=247  Identities=21%  Similarity=0.299  Sum_probs=191.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ...|.+.+.||+|+||.||+|.+...+      +.||||.....      .+. .+..++.++ +|+||+.+++++..++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~------~~vavK~~~~~------~~~-~E~~iL~~L-~HpnIv~l~~~~~~~~  233 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYP------QRVVVKAGWYA------SSV-HEARLLRRL-SHPAVLALLDVRVVGG  233 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCC------CEEEEeccccc------CHH-HHHHHHHHC-CCCCCCcEEEEEEECC
Confidence            457999999999999999999987655      48999964321      112 233444554 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..|||||++.|+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus       234 ~~~lv~e~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        234 LTCLVLPKYRSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EEEEEEEccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence            99999999999999888653 34799999999999999999999999999999999999999999999999999986533


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhhcc-
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--------VEEIYHSVVIKKE-  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--------~~ei~~~i~~~~~-  272 (632)
                      ... ........||+.|||||++.+.   .++.++|||||||+||||++|..|+....        ..++...+..... 
T Consensus       313 ~~~-~~~~~~~~GT~~Y~APE~~~~~---~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~  388 (461)
T PHA03211        313 SWS-TPFHYGIAGTVDTNAPEVLAGD---PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH  388 (461)
T ss_pred             ccc-cccccccCCCcCCcCHHHHcCC---CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence            211 1112345799999999999743   68899999999999999999877654321        2222222221110 


Q ss_pred             CCCCC-------------------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIP-------------------------------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p-------------------------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...++                               ..++.++.+||.+||+.||.+|||+.|+|+
T Consensus       389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        389 VDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             cccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence            00011                               134568999999999999999999999997

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.3e-35  Score=298.69  Aligned_cols=249  Identities=23%  Similarity=0.412  Sum_probs=203.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||++.+..++      +.||+|.+....  ......+.++ ...++.+ +|+||+.+.+.+..++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~~~   72 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDG------KQYVIKEINISKMSPKEREESRKE-VAVLSNM-KHPNIVQYQESFEENG   72 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCC------CEEEEEEEEhHhCChHHHHHHHHH-HHHHHhC-CCCCeeeeEeeecCCC
Confidence            5899999999999999999987654      489999986422  2222233333 3344444 6899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|+||||+. ++|.+.+.......+++..++.++.|++.||.|||+++++|+||+|+|||++.++.++|+|||++....
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~  152 (256)
T cd08218          73 NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLN  152 (256)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence            9999999998 588887765544578999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ...   .......|++.|+|||++.+   ..++.++|+|||||++|+|++|..||...+..+....+.. ...+..+..+
T Consensus       153 ~~~---~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  225 (256)
T cd08218         153 STV---ELARTCIGTPYYLSPEICEN---RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR-GSYPPVSSHY  225 (256)
T ss_pred             cch---hhhhhccCCccccCHHHhCC---CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc-CCCCCCcccC
Confidence            221   11123458899999999864   3578899999999999999999999998877777666543 4445567889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++.++|.+||+.+|.+||++.++++
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         226 SYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.2e-35  Score=304.69  Aligned_cols=264  Identities=22%  Similarity=0.343  Sum_probs=201.1

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ..++|++.+.||+|+||.||+|.+...+.  ..+..||||++...... ....+.++ ...+..+ .|+||+.+.+++..
T Consensus         2 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~e-i~~l~~l-~~~~i~~~~~~~~~   77 (284)
T cd05038           2 EKRHLKFIKQLGEGHFGKVELCRYDPLGD--NTGEQVAVKSLNHSGEEQHRSDFERE-IEILRTL-DHENIVKYKGVCEK   77 (284)
T ss_pred             chhhchhheeeccCCCeeEEEeeecCCCC--CCceEEEEEEeccccchHHHHHHHHH-HHHHHhC-CCCChheEEeeeec
Confidence            34678999999999999999998764421  23468999999765443 23333333 3444554 78999999988876


Q ss_pred             --CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 --NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 --~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                        +...+++|||++ |+|.+++... ...+++..++.++.|++.||+|||+++++||||||+|||++.++.++|+|||++
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  156 (284)
T cd05038          78 PGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLA  156 (284)
T ss_pred             CCCCceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence              557999999998 5787777553 236899999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH--------------
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE--------------  262 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e--------------  262 (632)
                      .................++..|+|||.+..   ..++.++|+|||||++|||++|..||.......              
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05038         157 KVLPEDKDYYYVKEPGESPIFWYAPECLRT---SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVT  233 (284)
T ss_pred             cccccCCcceeccCCCCCcccccCcHHHcc---CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHH
Confidence            765422111111112234567999999864   367889999999999999999999987643221              


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       263 i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ..............+..++.++.+++.+||+.||++||++.|+++.|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         234 RLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            11122222333444567889999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.5e-35  Score=301.40  Aligned_cols=251  Identities=23%  Similarity=0.306  Sum_probs=203.5

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      ||.|+||.||+|.+..++      ..||+|++.+....  .....+..+..++..+ +|+||+.+.+.+..+...|++||
T Consensus         1 lg~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   73 (262)
T cd05572           1 LGVGGFGRVELVKVKSKN------RTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLME   73 (262)
T ss_pred             CCCCCceEEEEEEECCCC------cEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEe
Confidence            699999999999987654      48999998653321  2222233333445555 79999999999999999999999


Q ss_pred             cCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCC
Q 006772          129 FYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS  207 (632)
Q Consensus       129 y~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~  207 (632)
                      |++ |+|.+.+.+.  ..+++..+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++.......    
T Consensus        74 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----  147 (262)
T cd05572          74 YCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----  147 (262)
T ss_pred             cCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----
Confidence            998 5777777543  468999999999999999999999999999999999999999999999999987653321    


Q ss_pred             ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--VEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       208 ~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      ......|++.|++||.+..   ..++.++|+||||+++|+|++|..||....  ..+.+..+......+.+|..+++++.
T Consensus       148 ~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T cd05572         148 KTWTFCGTPEYVAPEIILN---KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAK  224 (262)
T ss_pred             ccccccCCcCccChhHhcC---CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHH
Confidence            2233468999999999863   357889999999999999999999998876  55666665544566777888899999


Q ss_pred             HHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCcc
Q 006772          286 NVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      ++|.+||+.||++||+     ++|+++      +++|.+.+|+
T Consensus       225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~------~~~~~~~~~~  261 (262)
T cd05572         225 DLIKQLLRRNPEERLGNLKGGIKDIKK------HKWFNGFDWE  261 (262)
T ss_pred             HHHHHHccCChhhCcCCcccCHHHHhc------ChhhhCCCCC
Confidence            9999999999999999     677665      6777777776

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.1e-35  Score=305.88  Aligned_cols=262  Identities=23%  Similarity=0.405  Sum_probs=202.6

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      ||+|+||+||+|.+..++      +.||+|.+.+...  .........+..++..+ +|+|++.+++.+...+..|+|||
T Consensus         1 lg~g~~g~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e   73 (277)
T cd05577           1 LGKGGFGEVCACQVKATG------KMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMT   73 (277)
T ss_pred             CCCCCceeEEEEEEcCCC------cEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEe
Confidence            699999999999887654      4899999865321  11122222333455555 59999999999999999999999


Q ss_pred             cCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCC
Q 006772          129 FYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDS  207 (632)
Q Consensus       129 y~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~  207 (632)
                      |++ ++|.+++.......+++.+++.++.|++.||.|||+++++||||||+|||+++++.++|+|||++......    .
T Consensus        74 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~----~  149 (277)
T cd05577          74 LMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG----K  149 (277)
T ss_pred             cCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC----C
Confidence            998 57777776554457999999999999999999999999999999999999999999999999988754321    1


Q ss_pred             ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhhccCCCCCCCCCHH
Q 006772          208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVIKKEKPCIPSGLPPA  283 (632)
Q Consensus       208 ~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~~~~~p~~p~~lp~~  283 (632)
                      ......++..|+|||.+.+.   .++.++|+|||||++|+|++|+.||.....    .++...+.  .....++..++++
T Consensus       150 ~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  224 (277)
T cd05577         150 KIKGRAGTPGYMAPEVLQGE---VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPE  224 (277)
T ss_pred             ccccccCCCCcCCHHHhcCC---CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHH
Confidence            22234578899999998643   578899999999999999999999977543    22222221  2344566778999


Q ss_pred             HHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCC
Q 006772          284 VENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTS  334 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~  334 (632)
                      +.++|.+||+.||.+||     ++.+++.      ++++...+|........++++
T Consensus       225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~------h~~~~~~~~~~~~~~~~~~~~  274 (277)
T cd05577         225 AKDLCEALLQKDPEKRLGCRGGSADEVRE------HPLFKDLNWRRLEAGMLEPPF  274 (277)
T ss_pred             HHHHHHHHccCChhHccCCCcccHHHHHh------ChhhhcCChhhhhcCCCCCCC
Confidence            99999999999999999     5555554      677888888876655444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=1.7e-35  Score=308.44  Aligned_cols=262  Identities=15%  Similarity=0.143  Sum_probs=188.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHH--HH-----HHHHHh--hhccCCCce
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VN-----KFEELF--PKFRESQSV  110 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~--~~-----~~~~il--~~l~~h~~I  110 (632)
                      |..++|++.+.||+|+||.||+|.+..+..   ....+|+|+..........+.  ..     .....+  .....|+++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~---~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i   85 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHC---INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI   85 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcc---cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence            445789999999999999999999876521   123677776433221111110  00     000011  122468889


Q ss_pred             eEeeEEEEECC----EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          111 CWLHGISVING----KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       111 ~~l~~~~~~~~----~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      +.+++++....    ..+++|+++..++.+.+...  ..+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN  163 (294)
T ss_pred             CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            98888765442    45789999888877776543  3568888999999999999999999999999999999999999


Q ss_pred             cEEEEecCCceeccCCCC----CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HH
Q 006772          187 QLVLGDFGIPYLLLGRSL----SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VE  261 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~  261 (632)
                      .++|+|||+|+.......    .........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+ ..
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~---~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~  240 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA---CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG  240 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC---CCCcHHHHHHHHHHHHHHHhCCCCCCccccch
Confidence            999999999986532211    11122334699999999998743   68899999999999999999999998763 22


Q ss_pred             HHHHHH----Hhh-ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          262 EIYHSV----VIK-KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       262 ei~~~i----~~~-~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      +.....    ... ......+..++.++.+++..|++.+|++||++.+|++.|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        241 NLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            211111    111 011112356789999999999999999999999999865

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.4e-35  Score=300.71  Aligned_cols=248  Identities=23%  Similarity=0.388  Sum_probs=199.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++.++|++.+.||+|+||.||++...        ++.||+|.+.....  ...+.++ ..++..+ +|+|++.+.+++..
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~iK~~~~~~~--~~~~~~e-~~~l~~~-~~~~i~~~~~~~~~   70 (254)
T cd05083           3 LNLQKLTLGEIIGEGEFGAVLQGEYT--------GQKVAVKNIKCDVT--AQAFLEE-TAVMTKL-HHKNLVRLLGVILH   70 (254)
T ss_pred             ccHHHceeeeeeccCCCCceEecccC--------CCceEEEeecCcch--HHHHHHH-HHHHHhC-CCCCcCeEEEEEcC
Confidence            35678999999999999999998642        24799999864322  2333333 3444444 78999999998865


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      + ..+++|||+. |+|.+++.......+++..++.++.|++.||.|||+++++||||||+|||++.++.++|+|||+++.
T Consensus        71 ~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~  149 (254)
T cd05083          71 N-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV  149 (254)
T ss_pred             C-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCcccee
Confidence            4 4799999998 5888888765555789999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....      ......+..|+|||.+.+   +.++.++|+|||||++|||++ |..||...+..+....+. ....+..+
T Consensus       150 ~~~~------~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~  219 (254)
T cd05083         150 GSMG------VDNSKLPVKWTAPEALKH---KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-KGYRMEPP  219 (254)
T ss_pred             cccc------CCCCCCCceecCHHHhcc---CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-CCCCCCCC
Confidence            3211      112234568999999863   468889999999999999998 999999888776665554 33444456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      ..+|..+.+++.+||+.+|++||++.++++.|+
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence            788999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.1e-35  Score=304.37  Aligned_cols=247  Identities=22%  Similarity=0.355  Sum_probs=185.8

Q ss_pred             eEEcccCceEEEEEEEcCCCCC------cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           49 HRIGRGPFGDVWLATHHQSADD------FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~------~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.||+|+||.||+|.......+      ......|++|.+..........+.++ ..++.. .+||||+.+++++..+..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~-~~~l~~-l~hp~iv~~~~~~~~~~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFET-ASMMRQ-VSHKHIVLLYGVCVRDVE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHH-HHHHHh-CCCCCEeeEEEEEecCCC
Confidence            4689999999999986432210      11234689998865443333333333 233333 478999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc-------EEEEecCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ-------LVLGDFGI  195 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~-------vkL~DFGl  195 (632)
                      .+++|||++++.++.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.       ++++|||+
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence            99999999965555555444567999999999999999999999999999999999999987764       89999998


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML-TGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Eml-tG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +.....       .....|+..|||||.+..  ...++.++|||||||++|||+ +|..||......+... ..  ....
T Consensus       159 ~~~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~--~~~~  226 (262)
T cd05077         159 PITVLS-------RQECVERIPWIAPECVED--SKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FY--EGQC  226 (262)
T ss_pred             CccccC-------cccccccccccChhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HH--hcCc
Confidence            865421       122357889999998853  235788999999999999998 5899988766544322 11  1122


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ......+.++.+||.+||+.||.+||++.+|++.|
T Consensus       227 ~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         227 MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            23344568899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=2.4e-35  Score=304.33  Aligned_cols=257  Identities=19%  Similarity=0.337  Sum_probs=198.1

Q ss_pred             EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHh--hhccCCCceeEeeEEEEECCEEEE
Q 006772           50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELF--PKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        50 ~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il--~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      .||+|+||.||+|.+..++      +.||+|.+.+....  ........+..++  .....|++++.+.+.+..++..|+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~   74 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF   74 (278)
T ss_pred             CcccCCCeEEEEEEEecCC------CEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEE
Confidence            3899999999999987554      48999998653211  1111111122222  222478999999999999999999


Q ss_pred             EEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||||+.| +|.+++..  .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.++|+|||++......  
T Consensus        75 v~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--  150 (278)
T cd05606          75 ILDLMNGGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--  150 (278)
T ss_pred             EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--
Confidence            9999985 56555543  357999999999999999999999999999999999999999999999999998654221  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC---HHHHHHHHHhhccCCCCCCCCC
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---VEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~---~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                         ......|+..|+|||++...  ..++.++|+||+||++|||++|..||....   .......+  ....+.+|..++
T Consensus       151 ---~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~s  223 (278)
T cd05606         151 ---KPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFS  223 (278)
T ss_pred             ---CCcCcCCCcCCcCcHHhcCC--CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--hccCCCCCCcCC
Confidence               12334789999999998632  247889999999999999999999998763   23322222  234456677889


Q ss_pred             HHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCcccccccc
Q 006772          282 PAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRA  329 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~  329 (632)
                      .++.+++.+||..||.+||     ++.++++      ++++.+.+|.......
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~------~~~~~~~~~~~~~~~~  270 (278)
T cd05606         224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE------HPFFRSLDWQMVFLQK  270 (278)
T ss_pred             HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh------CccccCCCchHhhhcc
Confidence            9999999999999999999     8888875      6777778787665443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.3e-35  Score=300.57  Aligned_cols=251  Identities=25%  Similarity=0.386  Sum_probs=199.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--------HHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--------AKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--------~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      +|.+...||.|+||.||+|.+..++      +.||+|.+.......        .......+..++..+ +|+||+.+.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~   73 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSG------ELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLG   73 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCC------cEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEE
Confidence            4678899999999999999976544      489999886532211        111222333444554 7899999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++..+++|||++| +|.+++...  +.+++..+..++.|++.||+|||+++++||||||+|||+++++.++|+|||
T Consensus        74 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg  151 (267)
T cd06628          74 SSLDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFG  151 (267)
T ss_pred             EEEeCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccC
Confidence            99999999999999985 677776543  578999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCC---CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          195 IPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       195 lak~~~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      +++........   ........|+..|+|||.+.+   +.++.++|+|||||++|+|++|..||...+.......+.. .
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~  227 (267)
T cd06628         152 ISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ---TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-N  227 (267)
T ss_pred             CCcccccccccCCccccccccCCCcCccChhHhcc---CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-c
Confidence            98866432111   111123468899999999864   3578899999999999999999999988765544444332 3


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+.+|..++.++.++|.+||+.||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         228 ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            455677889999999999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=6.9e-36  Score=312.67  Aligned_cols=250  Identities=20%  Similarity=0.251  Sum_probs=183.6

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--CCEEEE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--NGKICI  125 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--~~~l~L  125 (632)
                      ..+||+|+||.||+|.+....    ....||+|.+......  ..+. ++..++..+ .|+||+.+++++..  +..+|+
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~----~~~~~a~k~~~~~~~~--~~~~-~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~l   77 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGK----DEKEYALKQIEGTGIS--MSAC-REIALLREL-KHPNVIALQKVFLSHSDRKVWL   77 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCC----ccceEEEEEecCCCCc--HHHH-HHHHHHHhC-CCCCeeeEEEEEeccCCCeEEE
Confidence            468999999999999875432    2358999998654321  2222 233444444 68999999998754  568899


Q ss_pred             EEecCCCCHHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE----ecCCcEEEEecC
Q 006772          126 AMKFYEGSVGDRIAQQR-------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL----SEHDQLVLGDFG  194 (632)
Q Consensus       126 VmEy~~GsL~d~l~~~~-------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl----d~~g~vkL~DFG  194 (632)
                      +|||+.+++.+.+....       ...+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||
T Consensus        78 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          78 LFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            99999999888875321       2358899999999999999999999999999999999999    566799999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH---------HHH
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE---------IYH  265 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e---------i~~  265 (632)
                      +++................||+.|+|||++.+.  ..++.++|+|||||++|||+||..||.......         ...
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~  235 (317)
T cd07867         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLD  235 (317)
T ss_pred             ceeccCCCcccccccCcceecccccCcHHhcCC--CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHH
Confidence            998654332222223345789999999998642  347889999999999999999999997543210         000


Q ss_pred             HHHhh-c-----------cCC------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          266 SVVIK-K-----------EKP------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       266 ~i~~~-~-----------~~p------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+... .           ..+                        ......+..+.+|+.+||+.||.+|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         236 RIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             HHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence            00000 0           000                        001123567889999999999999999999885

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-36  Score=340.21  Aligned_cols=264  Identities=18%  Similarity=0.300  Sum_probs=211.0

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|..-++++.+.|-+|||+.||+|.+...+      ..||+|++.... +.......++..+++.+..|+||+.+++.+.
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~------~~~AlKrm~~~d-e~~L~~v~~EI~~MK~L~gh~nIV~yidss~  105 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGG------KKYALKRMYVND-EEALNAVKREIDIMKLLSGHKNIVSYIDSSA  105 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCC------ceeeeeeeecCC-HHHHHHHHHHHHHHHHhcCCCceeeEecccc
Confidence            355678899999999999999999987653      489999987654 3445556666688899999999999988322


Q ss_pred             E----C---CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEecCCcE
Q 006772          119 I----N---GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       119 ~----~---~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld~~g~v  188 (632)
                      .    +   -.++|.||||. |+|.|++..+....|++.++++|+.|+++|+.+||...  |||||||-|||||+.+|+.
T Consensus       106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~  185 (738)
T KOG1989|consen  106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNY  185 (738)
T ss_pred             ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCE
Confidence            1    1   35789999999 79999998776667999999999999999999999987  9999999999999999999


Q ss_pred             EEEecCCceeccCCCCCCCcc------ccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDM------ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE  262 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~------~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e  262 (632)
                      ||||||.|.............      -..-.|+.|.|||++.--..-++++|+|||+|||+||-|+....||.+.....
T Consensus       186 KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la  265 (738)
T KOG1989|consen  186 KLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA  265 (738)
T ss_pred             EeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee
Confidence            999999885432111000000      01135899999999875445578999999999999999999999998754332


Q ss_pred             HHHHHHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          263 IYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       263 i~~~i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                          |+  .....+|  +..+..+.+||+.||+.||.+||++.++++.+..+.+.
T Consensus       266 ----Il--ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  266 ----IL--NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             ----EE--eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence                22  3333444  47889999999999999999999999999877776553

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.1e-35  Score=296.07  Aligned_cols=248  Identities=21%  Similarity=0.364  Sum_probs=201.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      ..+|+|.+.....  .....+. .+..+++.+ +|++++.+++.+..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~-~e~~~l~~~-~~~~i~~~~~~~~~~~   72 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQ------KLVIIKQIPVEQMTKDERLAAQ-NECQVLKLL-SHPNIIEYYENFLEDK   72 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCC------cEEEEEEEeccccccHHHHHHH-HHHHHHhhC-CCCchhheeeeEecCC
Confidence            5899999999999999999987654      4899999865421  2222222 333444444 6899999999998899


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCceec
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGlak~~  199 (632)
                      ..++||||++ ++|.+++.......+++..++.++.|++.+|+|||+++++|+||||+||++++++ .++|+|||++...
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (256)
T cd08220          73 ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL  152 (256)
T ss_pred             EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence            9999999998 4788888765555689999999999999999999999999999999999998654 6799999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ....    ......|+..|+|||.+.+   ..++.++|+||||+++|+|++|..||.+.+.......+.. .....++..
T Consensus       153 ~~~~----~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  224 (256)
T cd08220         153 SSKS----KAYTVVGTPCYISPELCEG---KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-GTFAPISDR  224 (256)
T ss_pred             CCCc----cccccccCCcccCchhccC---CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh-cCCCCCCCC
Confidence            3321    1223468899999999874   3578899999999999999999999998877666555543 334456778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++++.+++.+||+.||.+||++.+++.
T Consensus       225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         225 YSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            9999999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.1e-35  Score=306.00  Aligned_cols=251  Identities=22%  Similarity=0.295  Sum_probs=197.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||.|+||.||+|.+..++      ..||||.+......  ....+.+ +..++..+ +|+||+.+++++..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~i~~~~~~~~~~~   72 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTG------EVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKLLDVIHTEN   72 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCC------CEEEEEEccccccccccchHHHH-HHHHHHhc-CCCCCcchhhhcccCC
Confidence            5899999999999999999987655      48999988643221  1122233 33445555 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..++||||+.+++.+++.......+++..++.++.|++.||+|||+++++||||||+||+++.++.+||+|||++.....
T Consensus        73 ~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~  152 (284)
T cd07860          73 KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  152 (284)
T ss_pred             cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence            99999999999988888766567899999999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC-------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP-------  274 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p-------  274 (632)
                      .   ........+++.|+|||++.+.  ..++.++|+|||||++|||+||+.||.+.+..+....+......+       
T Consensus       153 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07860         153 P---VRTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG  227 (284)
T ss_pred             C---ccccccccccccccCCeEEecC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence            1   1112233578899999988642  246789999999999999999999998876544333322111110       


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          .....+++++.++|.+||+.||.+||++++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         228 VTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             hhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                                011346789999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.6e-35  Score=302.74  Aligned_cols=252  Identities=20%  Similarity=0.321  Sum_probs=195.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||+|.+..... .........+..++..+ .|+|++.+++++..+.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~   73 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETG------QIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKR   73 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCC------cEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCC
Confidence            47999999999999999999987654      4899999864322 11122223333444454 6899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..++||||+++++++.+... ...+++..++.++.||+.||+|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        74 ~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847          74 KLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             EEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            99999999998777766543 34789999999999999999999999999999999999999999999999999976533


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc---------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE---------  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~---------  272 (632)
                      ...   ......++..|+|||++.+.  ..++.++|+|||||++|||++|..||.+.+..+....+.....         
T Consensus       153 ~~~---~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd07847         153 PGD---DYTDYVATRWYRAPELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI  227 (286)
T ss_pred             Ccc---cccCcccccccCCHHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence            211   12234578899999998642  3578899999999999999999999998765443332221000         


Q ss_pred             -----------CCC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 -----------KPC---------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 -----------~p~---------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                 .+.         .-..++..+.+|+.+||+.||++||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence                       000         01246788999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.7e-36  Score=306.23  Aligned_cols=246  Identities=19%  Similarity=0.318  Sum_probs=187.5

Q ss_pred             eEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||+|.++..+.. ......||+|.+........+.+.+ +..++.. .+|+|++.+++++..++..++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-e~~~l~~-~~h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFE-AASMMSQ-LSHKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHH-HHHHHHh-CCCCChhheeeEEEeCCCcEEEE
Confidence            4699999999999988654321 1123468888875433222233332 3333444 47999999999999989999999


Q ss_pred             ecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc--------EEEEecCCcee
Q 006772          128 KFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ--------LVLGDFGIPYL  198 (632)
Q Consensus       128 Ey~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~--------vkL~DFGlak~  198 (632)
                      ||++| +|.+++.. .+..+++..++.++.||+.||+|||+++|+||||||+|||++.++.        ++++|||++..
T Consensus        79 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          79 EYVKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             ecCCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            99985 56666543 3347899999999999999999999999999999999999988765        69999998764


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ...       .....+++.|+|||++.+.  ..++.++|+|||||++|||++| ..||...+...... +  ......+|
T Consensus       158 ~~~-------~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~--~~~~~~~~  225 (258)
T cd05078         158 VLP-------KEILLERIPWVPPECIENP--QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-F--YEDRHQLP  225 (258)
T ss_pred             cCC-------chhccccCCccCchhccCC--CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-H--HHccccCC
Confidence            321       1234678899999998642  2478899999999999999998 46666655443322 2  13345567


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ...+.++.++|.+||+.||++||+++++++.|
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         226 APKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             CCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            77889999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-35  Score=305.07  Aligned_cols=252  Identities=23%  Similarity=0.367  Sum_probs=193.0

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|++.+.||+|+||.||+|.++.++      +.||||.+........ ..+. ++..++..+ +|+||+.+++++..+
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~-~E~~~l~~l-~h~~i~~~~~~~~~~   75 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTG------QLVALKEIRLEHEEGAPFTAI-REASLLKDL-KHANIVTLHDIIHTK   75 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCC------cEEEEEEEecccccCCchhHH-HHHHHHhhC-CCcceeeEEEEEecC
Confidence            478999999999999999999987554      4899999865332211 2222 233445554 789999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +..|+||||+.++|.+.+... ...+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        76 ~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  154 (291)
T cd07844          76 KTLTLVFEYLDTDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKS  154 (291)
T ss_pred             CeEEEEEecCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence            999999999999998887654 3478999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhccC------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEK------  273 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~~~~~------  273 (632)
                      ..   ........++..|+|||++.+.  ..++.++|+|||||++|||++|..||.+.. ..+....+......      
T Consensus       155 ~~---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (291)
T cd07844         155 VP---SKTYSNEVVTLWYRPPDVLLGS--TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETW  229 (291)
T ss_pred             CC---CccccccccccccCCcHHhhcC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhh
Confidence            11   1111223568899999998642  347889999999999999999999997655 22222211100000      


Q ss_pred             ------------------C----CCCCCCC--HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ------------------P----CIPSGLP--PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ------------------p----~~p~~lp--~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                        +    .....++  .++.+++.+||+.||++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         230 PGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                              0    0001234  78899999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.9e-35  Score=303.80  Aligned_cols=252  Identities=20%  Similarity=0.305  Sum_probs=198.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      +|++.++||.|+||.||+|++..++      ..||||.+..............+..++..+ +|+|++.+++.+...+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   73 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTG------EIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKL   73 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCC------eEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcE
Confidence            5899999999999999999987655      489999987543322222222333455555 689999999999999999


Q ss_pred             EEEEecCCCCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYEGSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      +|||||+.|++.+++.... ...+++..+..++.|++.||+|||+++++||||||+||++++++.++|+|||++......
T Consensus        74 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~  153 (284)
T cd07836          74 MLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP  153 (284)
T ss_pred             EEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence            9999999999988876543 246899999999999999999999999999999999999999999999999998754221


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--------  274 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--------  274 (632)
                         ........++..|++||++.+.  ..++.++|+|||||++|+|++|+.||.+.+..+....+......+        
T Consensus       154 ---~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
T cd07836         154 ---VNTFSNEVVTLWYRAPDVLLGS--RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGI  228 (284)
T ss_pred             ---ccccccccccccccChHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHH
Confidence               1112234578899999998643  246789999999999999999999999877655444332111000        


Q ss_pred             --------C-----------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------C-----------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------~-----------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                              .           +.+.+++++.+++.+||+.||.+||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                    0           11346788999999999999999999999885

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-35  Score=299.79  Aligned_cols=254  Identities=23%  Similarity=0.362  Sum_probs=198.3

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHH--HHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~--~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      +.||+|+||.||+|.+..++      +.||+|++.+.........  ...+..++....+|+|++.+++.+..++..|++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   75 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTG------DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLV   75 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCC------CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEE
Confidence            56899999999999987655      4899999865332111111  122223344455899999999999999999999


Q ss_pred             EecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC
Q 006772          127 MKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS  205 (632)
Q Consensus       127 mEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~  205 (632)
                      |||++| +|.+++...  +.+++..+..++.|++.||.|||+.+++||||+|+|||+++++.++|+|||+++....    
T Consensus        76 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----  149 (260)
T cd05611          76 MEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----  149 (260)
T ss_pred             EeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence            999984 777666443  4789999999999999999999999999999999999999999999999998875322    


Q ss_pred             CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc--CCCCCCCCCHH
Q 006772          206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE--KPCIPSGLPPA  283 (632)
Q Consensus       206 ~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~--~p~~p~~lp~~  283 (632)
                         .....|+..|+|||.+.+.   .++.++|+||||+++|||++|..||...+..+.+..+.....  ....+..++++
T Consensus       150 ---~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05611         150 ---NKKFVGTPDYLAPETILGV---GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPE  223 (260)
T ss_pred             ---cccCCCCcCccChhhhcCC---CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHH
Confidence               1234578999999998743   478899999999999999999999998887776666543222  12233468999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          284 VENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      +.+++.+||+.||++||++.++.+.+   .++++.+.+|+
T Consensus       224 ~~~~i~~~l~~~p~~R~~~~~~~~~l---~~~~~~~~~~~  260 (260)
T cd05611         224 AVDLINRLLCMDPAKRLGANGYQEIK---SHPFFKSINWD  260 (260)
T ss_pred             HHHHHHHHccCCHHHccCCCcHHHHH---cChHhhcCCCC
Confidence            99999999999999999765443322   25677777774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4.3e-35  Score=305.71  Aligned_cols=248  Identities=20%  Similarity=0.345  Sum_probs=198.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .+|++.+.||.|+||.||+|.+..++      +.||+|.+..........+.++ ..++..+ +|+|++.+++.+..++.
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e-~~~l~~l-~h~~iv~~~~~~~~~~~   90 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATG------QEVAIKQINLQKQPKKELIINE-ILVMKEL-KNPNIVNFLDSFLVGDE   90 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCC------cEEEEEEEecccCchHHHHHHH-HHHHHhc-CCCceeeeeeeEecCce
Confidence            57999999999999999999987655      4899999865433333333333 3344444 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||+.| +|.+.+..   ..+++.+++.++.|++.||+|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655          91 LFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             EEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence            9999999985 55555532   3689999999999999999999999999999999999999999999999998875432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p~~p~~l  280 (632)
                      ..   .......|+..|+|||.+.+   ..++.++|+|||||++|+|++|..||.+.+..+....+.... .....+..+
T Consensus       168 ~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (296)
T cd06655         168 EQ---SKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKL  241 (296)
T ss_pred             cc---ccCCCcCCCccccCcchhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccC
Confidence            21   11223468899999999864   357889999999999999999999999887655443333221 122345678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.+.++|.+||..||.+||++.+++.
T Consensus       242 ~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         242 SPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             CHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=3.1e-35  Score=302.23  Aligned_cols=252  Identities=23%  Similarity=0.317  Sum_probs=198.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +|++.+.||+|+||.||+|.+..++      ..||+|.+..... .........+..++..+ +|+|++.+++++..+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~   73 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETG------ETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSG   73 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCC------ceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCe
Confidence            5899999999999999999987655      4899999875432 11122223333445555 59999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      .++||||+.++|.+++... ...+++.+++.++.||+.||+|||+++++|+||||+||+++.++.++|+|||++......
T Consensus        74 ~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          74 FVLVMEYMPSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             eEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            9999999977888877654 357999999999999999999999999999999999999999999999999998765332


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--------  274 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--------  274 (632)
                      ..  .......|+..|+|||++.+.  ..++.++|+|||||++|||++|.+||.+.+..+.+..+......+        
T Consensus       153 ~~--~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (286)
T cd07832         153 EP--RLYSHQVATRWYRAPELLYGA--RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGL  228 (286)
T ss_pred             CC--CccccccCcccccCceeeecc--ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhc
Confidence            11  122345689999999998642  346889999999999999999988888776555444433211111        


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          ...+..+.++.++|.+||..||++||++++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                                011345789999999999999999999999886

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=9.5e-36  Score=326.85  Aligned_cols=247  Identities=19%  Similarity=0.328  Sum_probs=200.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccC-----CCceeEeeEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE-----SQSVCWLHGISV  118 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~-----h~~I~~l~~~~~  118 (632)
                      +|.+.+.||+|+||.|-+|.++++++      .||||+++.......+.  ..+..++..+..     --|+++++++|.
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e------~VAIKIiKN~k~f~~Q~--~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~  258 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGE------IVAIKIIKNKKRFLRQA--QIEIRILELLNKHDPDDKYNIVRMLDYFY  258 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCc------EEEEEeeccChHHHHHH--HHHHHHHHHHhccCCCCCeeEEEeeeccc
Confidence            68889999999999999999998885      89999998654432221  112234444442     347999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC--cEEEEecCCc
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD--QLVLGDFGIP  196 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g--~vkL~DFGla  196 (632)
                      ..+++|||.|.+.-+|.+++..++...|++..++.++.||+.||.+||+.+|||.||||+||||.+-+  .+||+|||.|
T Consensus       259 fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS  338 (586)
T KOG0667|consen  259 FRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSS  338 (586)
T ss_pred             cccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccc
Confidence            99999999999999999999988878899999999999999999999999999999999999998544  7999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-----
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-----  271 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-----  271 (632)
                      .....      ..++.+-+..|.|||++.+   .+|+.+.|+|||||++.||++|.+.|.|.+..+.+..|+.-.     
T Consensus       339 c~~~q------~vytYiQSRfYRAPEVILG---lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~  409 (586)
T KOG0667|consen  339 CFESQ------RVYTYIQSRFYRAPEVILG---LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP  409 (586)
T ss_pred             cccCC------cceeeeeccccccchhhcc---CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence            76422      2335677999999999985   489999999999999999999999999998776555554100     


Q ss_pred             ---------------------------------------------cCCCCCC-----------CCCHHHHHHHHHhhhcC
Q 006772          272 ---------------------------------------------EKPCIPS-----------GLPPAVENVIIGCFEYD  295 (632)
Q Consensus       272 ---------------------------------------------~~p~~p~-----------~lp~~l~~LI~~cL~~D  295 (632)
                                                                   .....|.           .-...+.++|.+||+.|
T Consensus       410 ~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~d  489 (586)
T KOG0667|consen  410 KMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWD  489 (586)
T ss_pred             HHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccC
Confidence                                                         0001120           01136789999999999


Q ss_pred             cCCCCCHHHHHH
Q 006772          296 LRNRPLMADILH  307 (632)
Q Consensus       296 P~~RPs~~ell~  307 (632)
                      |.+|++..+.++
T Consensus       490 P~~R~tp~qal~  501 (586)
T KOG0667|consen  490 PAERITPAQALN  501 (586)
T ss_pred             chhcCCHHHHhc
Confidence            999999988775

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-36  Score=320.47  Aligned_cols=249  Identities=21%  Similarity=0.303  Sum_probs=211.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHH-HHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV-FVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~-~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .=|.+.+.||+|.|+.|-+|+|.-+++      .||||++.+.+.+.... .+..+.. ..++-+||||++||.+..++.
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGe------kVAVKviDKTKlD~~st~hlfqEVR-CMKLVQHpNiVRLYEViDTQT   90 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGE------KVAVKVIDKTKLDTLSTGHLFQEVR-CMKLVQHPNIVRLYEVIDTQT   90 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccc------eeEEEEecccccchhhhhHHHHHHH-HHHHhcCcCeeeeeehhcccc
Confidence            358899999999999999999987775      89999998765443322 1222222 345668999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-cCCcEEEEecCCceec
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-EHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-~~g~vkL~DFGlak~~  199 (632)
                      .+|||+|+=+ |+|.|++..+. ..+.+..+.+|+.||+.||.|+|+..+|||||||+|+.+- +-|.+||+|||++-.+
T Consensus        91 KlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf  169 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF  169 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence            9999999998 69999998764 4789999999999999999999999999999999998765 6789999999998544


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      .    +.....+.||+..|-|||++.+..+.  .+++|||||||+||.+.+|++||...+..+.+.+|+  .-+...|..
T Consensus       170 ~----PG~kL~TsCGSLAYSAPEILLGDsYD--APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm--DCKYtvPsh  241 (864)
T KOG4717|consen  170 Q----PGKKLTTSCGSLAYSAPEILLGDSYD--APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM--DCKYTVPSH  241 (864)
T ss_pred             C----CcchhhcccchhhccCchhhhcCccC--CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh--cccccCchh
Confidence            3    23445678999999999999876322  368999999999999999999999998888888877  456778999


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++++||..||.+||.+|.+.+||..
T Consensus       242 vS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  242 VSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            9999999999999999999999999874

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-35  Score=295.41  Aligned_cols=247  Identities=24%  Similarity=0.419  Sum_probs=194.8

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      ++||+|+||.||+|.+.. +      +.||+|.+...... ....+.+ +..++.++ .|++|+.+++++...+..+++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~------~~v~~K~~~~~~~~~~~~~~~~-e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~   71 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-N------TEVAVKTCRSTLPPDLKRKFLQ-EAEILKQY-DHPNIVKLIGVCVQKQPIYIVM   71 (251)
T ss_pred             CccccCCCceEEEEEEeC-C------CcEEEEeccccCCHHHHHHHHH-HHHHHHhC-CCCCeEEEEEEEecCCCeEEEE
Confidence            479999999999999765 3      47999988654333 2223333 33444444 6899999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||+. ++|.+++... ...+++..++.++.+++.||+|||+++++||||||+|||++.++.++|+|||++......... 
T Consensus        72 e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-  149 (251)
T cd05041          72 ELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-  149 (251)
T ss_pred             EcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-
Confidence            9997 5676666543 347899999999999999999999999999999999999999999999999998754321111 


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVE  285 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~  285 (632)
                      .......++..|+|||++.+   +.++.++|+|||||++|||++ |..||...........+.. ......|..+|.++.
T Consensus       150 ~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  225 (251)
T cd05041         150 VSDGLKQIPIKWTAPEALNY---GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-GYRMPAPQLCPEEIY  225 (251)
T ss_pred             eccccCcceeccCChHhhcc---CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-CCCCCCCccCCHHHH
Confidence            11111234567999999863   468899999999999999999 8999988776665555432 334456778899999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          286 NVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      +++.+||..+|.+||++.|+++.|+
T Consensus       226 ~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         226 RLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHhh
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=314.19  Aligned_cols=252  Identities=21%  Similarity=0.297  Sum_probs=192.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..||||.+.+..... ...+.. +..++..+ +|+||+.+++++... 
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~-E~~~l~~l-~h~niv~~~~~~~~~~   76 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTG------VKVAIKKISPFEHQTFCQRTLR-EIKILRRF-KHENIIGILDIIRPPS   76 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCC------CeEEEEEecccccchhHHHHHH-HHHHHHhC-CCCCcCchhheeeccc
Confidence            68999999999999999999987665      489999986533222 222222 33445555 589999998876543 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          121 ----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       121 ----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                          ...|++|||+.+++.+.+..   +.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~  153 (336)
T cd07849          77 FESFNDVYIVQELMETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLA  153 (336)
T ss_pred             ccccceEEEEehhcccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccce
Confidence                35899999999988877643   47999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-----
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-----  271 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-----  271 (632)
                      +................||+.|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.+.......+....     
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~  231 (336)
T cd07849         154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ  231 (336)
T ss_pred             eeccccccccCCcCCcCcCCCccChHHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            7653322222222335789999999987532  357889999999999999999999998765433222111000     


Q ss_pred             -------------------cCCC-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 -------------------EKPC-----IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 -------------------~~p~-----~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                         ..+.     ..+..++++.++|.+||+.||++||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~  291 (336)
T cd07849         232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA  291 (336)
T ss_pred             HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                               0000     01345788999999999999999999999887

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-37  Score=332.27  Aligned_cols=253  Identities=24%  Similarity=0.377  Sum_probs=210.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +-+.++..||.|+||+||+|..+.+.      -..|-|++...+.+..+.++-+. +++..| .||+|+.|++.|..++.
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~------~lAAaKvIetkseEELEDylVEI-eILa~C-dHP~ivkLl~ayy~enk  103 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETK------LLAAAKVIETKSEEELEDYLVEI-EILAEC-DHPVIVKLLSAYYFENK  103 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccch------hhhhhhhhcccchhHHhhhhhhh-hhhhcC-CChHHHHHHHHHhccCc
Confidence            45688999999999999999887544      35678888777776666666655 456666 49999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      ++|..|||.|+--|.+.-.-+..+++.++..++.|++.||.|||+++|||||||..|||+.-+|.++|+|||.+......
T Consensus       104 LwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t  183 (1187)
T KOG0579|consen  104 LWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST  183 (1187)
T ss_pred             eEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhH
Confidence            99999999976555555445679999999999999999999999999999999999999999999999999987543221


Q ss_pred             CCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCC
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPS  278 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~  278 (632)
                         .....+++|||+|||||++..+.  ..+|++++||||||++|.||..+.+|-...++...+..|. +..+|.  .|+
T Consensus       184 ---~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia-KSePPTLlqPS  259 (1187)
T KOG0579|consen  184 ---RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSEPPTLLQPS  259 (1187)
T ss_pred             ---HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh-hcCCCcccCcc
Confidence               12235689999999999987542  3579999999999999999999999998888877666654 233332  578


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++..+.+++.+||.+||..||++++|++
T Consensus       260 ~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  260 HWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            99999999999999999999999999885

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=5.8e-35  Score=298.42  Aligned_cols=254  Identities=25%  Similarity=0.380  Sum_probs=196.9

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +.+++.....||+|+||.||+|.+..++      ..||+|.+........+.+.++. .++..+ +|+||+.+++++..+
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~~k~~~~~~~~~~~~~~~e~-~~l~~l-~h~~iv~~~~~~~~~   77 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQ------VRIAIKEIPERDSRYVQPLHEEI-ALHSYL-KHRNIVQYLGSDSEN   77 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCC------cEEEEEEecCCCHHHHHHHHHHH-HHHHhc-CCCCeeeeeeeeccC
Confidence            3445555678999999999999987654      48999998765544444444443 344444 799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEecCCc
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKL--PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGDFGIP  196 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l--~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~DFGla  196 (632)
                      +..+++|||+. ++|.+.+... ...+  ++..+..++.||+.||+|||+++|+||||||+||+++. ++.++|+|||++
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~  156 (268)
T cd06624          78 GFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTS  156 (268)
T ss_pred             CEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence            99999999998 5777666543 2345  78889999999999999999999999999999999986 679999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~~p~  275 (632)
                      .......   .......|++.|+|||++... ...++.++|+||||+++|+|++|..||..... .............+.
T Consensus       157 ~~~~~~~---~~~~~~~~~~~~~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  232 (268)
T cd06624         157 KRLAGIN---PCTETFTGTLQYMAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPE  232 (268)
T ss_pred             eecccCC---CccccCCCCccccChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCC
Confidence            7653221   112234578999999998643 22477899999999999999999999976432 222222222234566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|..+++++.+++.+||+.+|.+||++.+++.
T Consensus       233 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         233 IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            78889999999999999999999999999886

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.3e-35  Score=306.54  Aligned_cols=250  Identities=22%  Similarity=0.429  Sum_probs=196.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +..++|++.+.||+|+||+||+|.+..++      +.||+|++....... ...+.++ .+++..+ +|+||+.+++.+.
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E-~~~l~~l-~h~~i~~~~~~~~   73 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVKHIPTG------TVMAKKVVHIGAKSSVRKQILRE-LQIMHEC-RSPYIVSFYGAFL   73 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEEEcCCC------cEEEEEEEEecCcchHHHHHHHH-HHHHHHc-CCCCcceEeeeEe
Confidence            34578999999999999999999987655      489999886543222 2333333 3444444 7999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..+.+++||||++| +|.+++..  .+.+++..+..++.+++.||.|||+ ++++||||||+||++++++.++|+|||++
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~  151 (284)
T cd06620          74 NENNICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVS  151 (284)
T ss_pred             cCCEEEEEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence            99999999999985 66555543  3578999999999999999999997 68999999999999999999999999987


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-----------HHHH
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-----------EIYH  265 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-----------ei~~  265 (632)
                      ......     ......|+..|+|||++.+   +.++.++|+|||||++|+|++|..||......           +...
T Consensus       152 ~~~~~~-----~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  223 (284)
T cd06620         152 GELINS-----IADTFVGTSTYMSPERIQG---GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ  223 (284)
T ss_pred             cchhhh-----ccCccccCcccCCHHHHcc---CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHH
Confidence            654221     1123578999999999863   36788999999999999999999999865432           2222


Q ss_pred             HHHhhccCCCCCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          266 SVVIKKEKPCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       266 ~i~~~~~~p~~p~~-lp~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      .+. ....+.++.. ++.++.+|+.+||+.||++||++.|+++.
T Consensus       224 ~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         224 QIV-QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             HHh-hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            222 1223334433 88899999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=8.7e-35  Score=301.00  Aligned_cols=255  Identities=22%  Similarity=0.345  Sum_probs=198.1

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.+|+|.+...... ... ...+..++.++.+|+|++.+++++... 
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~------~~~aik~~~~~~~~-~~~-~~~e~~~l~~l~~h~ni~~~~~~~~~~~   92 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDG------SLAAVKILDPISDV-DEE-IEAEYNILQSLPNHPNVVKFYGMFYKAD   92 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCC------CEEEEEEecccccH-HHH-HHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence            378999999999999999999987654      48999998653321 122 233345566666899999999988653 


Q ss_pred             ----CEEEEEEecCCC-CHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          121 ----GKICIAMKFYEG-SVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       121 ----~~l~LVmEy~~G-sL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                          +..|+||||++| +|.+++...  ....+++..++.++.|++.||+|||+++++||||||+||+++.++.+||+||
T Consensus        93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~df  172 (291)
T cd06639          93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDF  172 (291)
T ss_pred             ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeec
Confidence                468999999985 777766532  3457899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |++........   ......|+..|+|||.+....  ...++.++|+|||||++|||++|+.||......+....+....
T Consensus       173 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~  249 (291)
T cd06639         173 GVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP  249 (291)
T ss_pred             ccchhcccccc---cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC
Confidence            99876432211   112346889999999986431  1236789999999999999999999998876654443332211


Q ss_pred             c-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 E-KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~-~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      . ....+...+..+.++|.+||+.||++||++.+++.
T Consensus       250 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         250 PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            1 11234567789999999999999999999999886

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.4e-35  Score=303.37  Aligned_cols=247  Identities=23%  Similarity=0.366  Sum_probs=199.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ..|+..++||.|+||.||+|.+..++      ..||||++..... .....+.++ ..++..+ .|++++.+.+.+..++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~~~   75 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQ------QVVAIKIIDLEEAEDEIEDIQQE-ITVLSQC-DSPYVTKYYGSYLKGT   75 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCC------EEEEEEEEeccccHHHHHHHHHH-HHHHHhC-CCCCEeeEEEEEEECC
Confidence            46888899999999999999987655      4899999864332 222333333 3344444 7899999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|+||||++| +|.+++..   +.+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        76 ~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~  152 (277)
T cd06640          76 KLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             EEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence            99999999985 77776642   478999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ...   .......++..|+|||++.+   ..++.++|+|||||++|||++|..||...+.......+ .....+.++..+
T Consensus       153 ~~~---~~~~~~~~~~~y~apE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~  225 (277)
T cd06640         153 DTQ---IKRNTFVGTPFWMAPEVIQQ---SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-PKNNPPTLTGEF  225 (277)
T ss_pred             CCc---cccccccCcccccCHhHhcc---CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-hcCCCCCCchhh
Confidence            321   11223467889999999863   35788999999999999999999999887766554433 233455566778


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++.+++.+||+.||++||++.+++.
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         226 SKPFKEFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             hHHHHHHHHHHcccCcccCcCHHHHHh
Confidence            999999999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=3.2e-35  Score=342.23  Aligned_cols=260  Identities=22%  Similarity=0.272  Sum_probs=197.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--h-hHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--D-CAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.++||+|+||.||+|.+..++      +.||||++.....  . ....+.+ +..++..+ +||||+.+++++..
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg------~~VAIK~I~~~l~~~e~~~~rflr-Ei~ILs~L-~HPNIVkl~~v~~d   73 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCS------RRVALKKIREDLSENPLLKKRFLR-EAKIAADL-IHPGIVPVYSICSD   73 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCC------cEEEEEEECcccccCHHHHHHHHH-HHHHHHhC-CCcCcCeEEEEEee
Confidence            58999999999999999999987655      4899999865321  1 1223333 33444444 68999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEE
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR---------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~---------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vk  189 (632)
                      ++..|++|||++ |+|.+++....         ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.++
T Consensus        74 ~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vK  153 (932)
T PRK13184         74 GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVV  153 (932)
T ss_pred             CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEE
Confidence            999999999998 57777765321         13456778899999999999999999999999999999999999999


Q ss_pred             EEecCCceeccCCCCC---------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC
Q 006772          190 LGDFGIPYLLLGRSLS---------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP  254 (632)
Q Consensus       190 L~DFGlak~~~~~~~~---------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P  254 (632)
                      |+|||+++........               .......+||+.|||||++.+.   .++.++|+|||||++|||++|..|
T Consensus       154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~---~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV---PASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC---CCCcHhHHHHHHHHHHHHHHCCCC
Confidence            9999999865211000               0011234699999999998743   678999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHhhccC-CCCCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhhh
Q 006772          255 WFGKSVEEIYHSVVIKKEK-PCIPSGLPPAVENVIIGCFEYDLRNRP-LMADILHAFESSQ  313 (632)
Q Consensus       255 F~~~~~~ei~~~i~~~~~~-p~~p~~lp~~l~~LI~~cL~~DP~~RP-s~~ell~~Le~~~  313 (632)
                      |...+..++.......... ......+|+.+.+++.+||+.||++|| +++++++.|+...
T Consensus       231 F~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l  291 (932)
T PRK13184        231 YRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL  291 (932)
T ss_pred             CCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            9886654433221111111 111246889999999999999999997 5677777776654

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.4e-35  Score=307.49  Aligned_cols=248  Identities=19%  Similarity=0.330  Sum_probs=197.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .+|++.+.||+|+||.||+|.+..++      +.||+|.+........+.+.++ ..++.. .+|+|++.+++.+..++.
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e-~~~l~~-~~h~~i~~~~~~~~~~~~   90 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATG------QEVAIKQMNLQQQPKKELIINE-ILVMRE-NKNPNIVNYLDSYLVGDE   90 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCC------CEEEEEEEecCccchHHHHHHH-HHHHHh-CCCCCEeeEEEEEecCCE
Confidence            68999999999999999999987655      4899999865443333333333 233433 489999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++ ++|.+++.+   ..+++..+..++.|++.||.|||+.+|+||||||+|||++.++.++|+|||++.....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             EEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            999999998 466666543   3689999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-ccCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK-KEKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~-~~~p~~p~~l  280 (632)
                      ..   .......|++.|+|||.+.+   ..++.++|+|||||++|+|++|..||.+.+.......+... ......|..+
T Consensus       168 ~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
T cd06656         168 EQ---SKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERL  241 (297)
T ss_pred             Cc---cCcCcccCCccccCHHHHcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCcccc
Confidence            21   11223468899999999864   35788999999999999999999999876654332222211 1122345678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+.+++.+||+.||++||++.++++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         242 SAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            899999999999999999999999887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=6.2e-35  Score=302.14  Aligned_cols=251  Identities=23%  Similarity=0.325  Sum_probs=192.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-HHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-KVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.++.++      ..||+|.+........ ..+.+ +..++..+ .|+||+.+++++..++
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~-e~~~l~~l-~h~ni~~~~~~~~~~~   76 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRING------QLVALKVISMKTEEGVPFTAIR-EASLLKGL-KHANIVLLHDIIHTKE   76 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCC------cEEEEEEecccCcCCCcHHHHH-HHHHHHhc-CCCCEeEEEEEEecCC
Confidence            68999999999999999999987655      4899999865332221 22223 33444554 6899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..|+||||+.+++++.+... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||+++....
T Consensus        77 ~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  155 (291)
T cd07870          77 TLTFVFEYMHTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSI  155 (291)
T ss_pred             eEEEEEecccCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence            99999999999988877643 34678899999999999999999999999999999999999999999999999875422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhcc--------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKE--------  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~--------  272 (632)
                      .   ........+++.|+|||++.+.  ..++.++|+|||||++|||++|..||.+.+. .+....+.....        
T Consensus       156 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (291)
T cd07870         156 P---SQTYSSEVVTLWYRPPDVLLGA--TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP  230 (291)
T ss_pred             C---CCCCCCccccccccCCceeecC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence            1   1112334578999999998642  2467899999999999999999999987543 222222110000        


Q ss_pred             -------------CCCCC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 -------------KPCIP---------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 -------------~p~~p---------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                   ....+         ...++++.+++.+|++.||++|||+.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                         00000         012578999999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=4.6e-35  Score=299.02  Aligned_cols=254  Identities=20%  Similarity=0.358  Sum_probs=201.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc----------hhhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK----------EDCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~----------~~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      +|++.+.||+|+||.||+|.+....     .+.+|+|.+....          ......+..+ ..++.+...|+||+.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~l~~~~~h~~i~~~   74 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNG-----QNLLALKEINVHNPAFGKDKRERDKSIGDIVSE-VTIIKEQLRHPNIVRY   74 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCC-----CceeeeeEeeccccccccccccchHHHHHHHHH-HHHHhhcCCCCCeeeE
Confidence            4788999999999999999987622     2489999875321          1112222222 2334445689999999


Q ss_pred             eEEEEECCEEEEEEecCCC-CHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEE
Q 006772          114 HGISVINGKICIAMKFYEG-SVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~G-sL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vk  189 (632)
                      ++.+..++..|++|||++| +|.+.+...  ....+++..++.++.|++.||.|||+ .+++|+||||+|||++.++.++
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~  154 (269)
T cd08528          75 YKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVT  154 (269)
T ss_pred             EeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEE
Confidence            9999999999999999985 777776543  34578999999999999999999996 7899999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 006772          190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~  269 (632)
                      |+|||++.......    ......|+..|+|||.+.+   +.++.++|+||||+++|||++|..||...+.......+..
T Consensus       155 l~dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~---~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~  227 (269)
T cd08528         155 ITDFGLAKQKQPES----KLTSVVGTILYSCPEIVKN---EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE  227 (269)
T ss_pred             Eecccceeeccccc----ccccccCcccCcChhhhcC---CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh
Confidence            99999987653321    2234568999999999874   4578899999999999999999999988776665555543


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                      ....+......++++.++|.+||+.||++||++.|+...++
T Consensus       228 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         228 AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            33333333467899999999999999999999999988664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=8.8e-35  Score=295.00  Aligned_cols=253  Identities=28%  Similarity=0.503  Sum_probs=198.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      +.||+|.++.....  ....+.++. .++..+ +|++|+.+++.+...+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~-~~~~~l-~~~~i~~~~~~~~~~~   72 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTG------ELMAVKEIRIQDNDPKTIKEIADEM-KVLELL-KHPNLVKYYGVEVHRE   72 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCC------cEEEEEEEECcccchHHHHHHHHHH-HHHHhC-CCCChhheeeeEecCC
Confidence            5899999999999999999886554      48999998754432  233333333 344444 7899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+++|+||++ ++|.+.+..  +..+++..+..++.|++.||+|||+++|+|+||||+||++++++.+||+|||++....
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          73 KVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             EEEEEEecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence            9999999998 567776654  3468999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCCCCCc-cccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhccCCCCCC
Q 006772          201 GRSLSDSD-MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       201 ~~~~~~~~-~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~~~p~~p~  278 (632)
                      ........ .....+++.|+|||++.+.....++.++|+||||+++|||++|..||...+.. .....+. ....+.+|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~  229 (264)
T cd06626         151 NNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG-AGHKPPIPD  229 (264)
T ss_pred             CCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh-cCCCCCCCc
Confidence            33221111 12346789999999987543234788999999999999999999999776432 2222222 244455565


Q ss_pred             CC--CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GL--PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~l--p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..  ++.+.++|.+||+.||.+||++.+++.
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            44  899999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.1e-35  Score=296.99  Aligned_cols=249  Identities=23%  Similarity=0.358  Sum_probs=198.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.|++|.+.....  ...+.+ +..++..+ +|+|++.+.+.+..+.
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~--~~~~~~-e~~~~~~l-~~~~i~~~~~~~~~~~   71 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETG------QVVAIKVVPVEED--LQEIIK-EISILKQC-DSPYIVKYYGSYFKNT   71 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCC------cEEEEEEeecHHH--HHHHHH-HHHHHHhC-CCCcEeeeeeeeecCC
Confidence            468999999999999999999987644      4899999864322  333333 33445555 8999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|++|||+.| +|.+++.. ....+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~  150 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLT  150 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcc
Confidence            99999999995 66666543 34678999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-ccCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK-KEKPCIPSG  279 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~-~~~p~~p~~  279 (632)
                      ...   .......|+..|+|||++.+.   .++.++|+||||+++|+|++|+.||...+..+....+... ......+..
T Consensus       151 ~~~---~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T cd06612         151 DTM---AKRNTVIGTPFWMAPEVIQEI---GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEK  224 (256)
T ss_pred             cCc---cccccccCCccccCHHHHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhh
Confidence            321   112234578999999998643   6788999999999999999999999887655443332211 111223456


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++.++|.+||+.||++||++.+++.
T Consensus       225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            7889999999999999999999999886

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=6.2e-35  Score=297.37  Aligned_cols=251  Identities=24%  Similarity=0.374  Sum_probs=196.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhH---HHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCA---KVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~---~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +|++.+.||.|+||.||+|.+.. +      +.+|+|.+.....  ...   .....++..++..+ +|+||+.+.+++.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~-~------~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   72 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQ-G------QLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCL   72 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcC-C------CeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEee
Confidence            47889999999999999997632 2      4799998864321  111   11223333445555 6899999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..+++|||++| +|.+++.+.  ..+++..+..++.|++.||+|||+.+|+|+||||+||++++++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631          73 DDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhH
Confidence            99999999999985 676666442  478999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCC---CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-ccC
Q 006772          198 LLLGRSL---SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK-KEK  273 (632)
Q Consensus       198 ~~~~~~~---~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~-~~~  273 (632)
                      .......   .........|+..|+|||++.+.   .++.++|+|||||++|+|++|..||...+.......+... ...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  227 (265)
T cd06631         151 RLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES---GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM  227 (265)
T ss_pred             hhhhccccccccccccccCCCccccChhhhcCC---CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC
Confidence            5422111   11112234689999999998743   5788999999999999999999999876654433333322 234


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+..++.++.++|++||+.||.+||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         228 PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            5567889999999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=2.5e-35  Score=303.21  Aligned_cols=251  Identities=22%  Similarity=0.338  Sum_probs=195.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+......  ..+.+.+ +..++..+ +|+||+.+++++..+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~i~~~~~~~~~~   72 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETG------QIVAIKKFLESEDDKMVKKIAMR-EIRMLKQL-RHENLVNLIEVFRRK   72 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCC------CEEEEEeHhhccCcchhhHHHHH-HHHHHHhc-CCcchhhHHHhcccC
Confidence            47999999999999999999987654      48999998653222  1222333 33444444 789999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +..|+||||+++++++.+... ...+++..++.++.|++.||+|||+.+|+|+||+|+||++++++.++|+|||++....
T Consensus        73 ~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~  151 (286)
T cd07846          73 KRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  151 (286)
T ss_pred             CeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence            999999999998766665443 3468999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc--------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE--------  272 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~--------  272 (632)
                      ...   .......++..|+|||++.+.  ..++.++|+|||||++|||++|.+||...+..+....+.....        
T Consensus       152 ~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (286)
T cd07846         152 APG---EVYTDYVATRWYRAPELLVGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE  226 (286)
T ss_pred             CCc---cccCcccceeeccCcHHhccc--cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence            321   122334678999999998642  3467899999999999999999999987665443333221000        


Q ss_pred             ------------CCC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 ------------KPC---------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ------------~p~---------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                  .+.         ..+.++..+.+++.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                        000         12367889999999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=4.4e-35  Score=306.43  Aligned_cols=253  Identities=23%  Similarity=0.275  Sum_probs=197.8

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +.++|++.+.||+|+||.||+|.+..++      ..||+|.+.......  .....+ +..++.++ +|+|++.+++++.
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~i~~~~~~~~   76 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSG------EIVALKKVRMDNERDGIPISSLR-EITLLLNL-RHPNIVELKEVVV   76 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCC------cEEEEEEEEeccCCCCCcchhhH-HHHHHHhC-CCCCCcceEEEEe
Confidence            4689999999999999999999987665      489999986432211  111222 23444444 6899999999887


Q ss_pred             EC--CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          119 IN--GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       119 ~~--~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..  +.+++||||+.++|.+++... ...+++.+++.++.||+.||+|||+++++||||||+|||++.++.+||+|||++
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~  155 (309)
T cd07845          77 GKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLA  155 (309)
T ss_pred             cCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcccee
Confidence            54  578999999999988888654 357999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--  274 (632)
                      .......   .......+++.|+|||.+.+.  ..++.++|+|||||++|||++|..||.+.+..+.+..+......+  
T Consensus       156 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~  230 (309)
T cd07845         156 RTYGLPA---KPMTPKVVTLWYRAPELLLGC--TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNE  230 (309)
T ss_pred             eecCCcc---CCCCcccccccccChhhhcCC--CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            7653321   112223457889999998642  247889999999999999999999999888776655544311100  


Q ss_pred             ---------------CCC-----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 ---------------CIP-----------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ---------------~~p-----------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                     ..+           ...++++.++|.+||+.||++||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         231 SIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             hhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                           000           125788999999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=9.6e-35  Score=297.78  Aligned_cols=253  Identities=18%  Similarity=0.259  Sum_probs=189.5

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|+||.||+|......    ....+++|.+...... ....+.++ ..++.. .+|+||+++++.+......|+||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e-~~~~~~-l~h~~iv~~~~~~~~~~~~~lv~   74 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDT----GVARVVVKELKANASSKEQNEFLQQ-GDPYRI-LQHPNILQCLGQCVEAIPYLLVF   74 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCC----CcceEEEEEecCCCChHHHHHHHHH-HHHHhc-cCCcchhheEEEecCCCccEEEE
Confidence            36999999999999764332    2245778877654322 22333333 233443 47999999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          128 KFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      ||++ |+|.+++.+..  ...+++..++.++.||+.||+|||+++++||||||+|||++.++.++|+|||++........
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~  154 (268)
T cd05086          75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY  154 (268)
T ss_pred             ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence            9998 58888776542  23567778889999999999999999999999999999999999999999998754321111


Q ss_pred             CCCccccccCCCccCCccccCCCC----CCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc----cCCC
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEV----RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKK----EKPC  275 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~----~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~----~~p~  275 (632)
                       ........|+..|+|||++....    ...++.++|+|||||++|||++ +..||...+..+.+..+....    ..+.
T Consensus       155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  233 (268)
T cd05086         155 -IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQ  233 (268)
T ss_pred             -hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCc
Confidence             01122356789999999985321    2245789999999999999997 677898777666655544332    2244


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      ++...++.+.+++.+|| .+|++||+++++++.|
T Consensus       234 ~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         234 LELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             cCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence            45567899999999999 6899999999998866

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=8.5e-35  Score=306.15  Aligned_cols=251  Identities=20%  Similarity=0.309  Sum_probs=202.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +.|+..+.||+|+||.||+|.+..++      ..||+|.+.....   .....+.++ ...+..+ +|+|++.+++++..
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~------~~valK~~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~iv~~~~~~~~   96 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTN------EVVAIKKMSYSGKQSNEKWQDIIKE-VKFLQRI-KHPNSIEYKGCYLR   96 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCC------cEEEEEEEecCCCCchHHHHHHHHH-HHHHHhC-CCCCEEEEEEEEee
Confidence            45888999999999999999987655      4899999864322   122233333 3444554 68999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++..++||||+.|++.+.+... ...+++.++..++.|++.||.|||+++|+||||+|+||+++.++.++|+|||++...
T Consensus        97 ~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~  175 (317)
T cd06635          97 EHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIA  175 (317)
T ss_pred             CCeEEEEEeCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCcccc
Confidence            9999999999999988877654 457899999999999999999999999999999999999999999999999987643


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ..       .....|++.|+|||++.....+.++.++|+|||||++|||++|..||...+.......+......+..+..
T Consensus       176 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  248 (317)
T cd06635         176 SP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNE  248 (317)
T ss_pred             CC-------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCcc
Confidence            21       12346889999999985332446788999999999999999999999887766655555443333334457


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      +++.+.++|.+||+.+|.+||++.++++..
T Consensus       249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             ccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            889999999999999999999999999743

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-35  Score=300.24  Aligned_cols=248  Identities=23%  Similarity=0.368  Sum_probs=196.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhcc--CCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFR--ESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~--~h~~I~~l~~~~~~~  120 (632)
                      .|++.+.||+|+||.||+|.+..++      +.||+|.+..... .....+.+ +..+++.+.  .|++++.+++.+..+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~-e~~~l~~l~~~~~~~vi~~~~~~~~~   74 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTG------RVVALKIINLDTPDDDVSDIQR-EVALLSQLRQSQPPNITKYYGSYLKG   74 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCC------cEEEEEEecCCCCchhHHHHHH-HHHHHHHhccCCCCCeeeEeeeeeeC
Confidence            5788899999999999999987654      4899999865322 22233333 334455554  589999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ...|++|||++| +|.+++..   +.+++..++.++.|++.||.|||+.+|+|+||+|+||+++.++.++|+|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06917          75 PRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALL  151 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence            999999999985 66666532   37899999999999999999999999999999999999999999999999998776


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC-
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS-  278 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~-  278 (632)
                      ....   .......|+..|+|||.+...  ..++.++|+|||||++|+|++|..||.+.+.......+. ....+.++. 
T Consensus       152 ~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~  225 (277)
T cd06917         152 NQNS---SKRSTFVGTPYWMAPEVITEG--KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP-KSKPPRLEDN  225 (277)
T ss_pred             CCCc---cccccccCCcceeCHHHhccC--CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc-cCCCCCCCcc
Confidence            4322   122334689999999998632  246889999999999999999999998876554433222 222333444 


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+.++.+++.+||+.||++||++.+++.
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         226 GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            38899999999999999999999999886

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=3.3e-35  Score=304.49  Aligned_cols=252  Identities=23%  Similarity=0.266  Sum_probs=197.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.+|+|.++......  ...+.+ +..++..+ .|+||+.+++++..
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~-e~~~l~~l-~h~ni~~~~~~~~~   75 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTG------EIVALKKLKMEKEKEGFPITSLR-EINILLKL-QHPNIVTVKEVVVG   75 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCC------cEEEEEEEeeccccccchhhHHH-HHHHHHhc-CCCCEEEEEEEEEe
Confidence            368999999999999999999987654      489999986533221  112222 33444555 59999999998887


Q ss_pred             C--CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 N--GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 ~--~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      +  +..||+|||+.++|.+++.... ..+++..++.++.|++.||+|||+++++|+||||+|||++.++.++|+|||++.
T Consensus        76 ~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843          76 SNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             cCCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence            7  8999999999998888876543 468999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc------
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK------  271 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~------  271 (632)
                      ......   .......+++.|+|||.+.+.  ..++.++|+||||+++|||++|..||...+..+....+....      
T Consensus       155 ~~~~~~---~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~  229 (293)
T cd07843         155 EYGSPL---KPYTQLVVTLWYRAPELLLGA--KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEK  229 (293)
T ss_pred             eccCCc---cccccccccccccCchhhcCC--ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchH
Confidence            653321   122334578899999998643  236789999999999999999999998876655443332110      


Q ss_pred             -----------------------cCCCCCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 -----------------------EKPCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 -----------------------~~p~~p~~-lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                             ....++.. +++.+.++|++||+.||++||++.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         230 IWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                                   01122333 6889999999999999999999999886

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4e-36  Score=322.16  Aligned_cols=258  Identities=21%  Similarity=0.315  Sum_probs=201.7

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC-c-hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL-K-EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~-~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .|....|++.++||+||.++||++.....       +.||+|.+... . .....-+.++ ..++.++..|..|+.|+++
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~-------~iyalkkv~~~~~D~qtl~gy~nE-I~lL~KLkg~~~IIqL~DY  428 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLNSDK-------QIYALKKVVLLEADNQTLDGYRNE-IALLNKLKGHDKIIQLYDY  428 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeecCCC-------cchhhhHHHHhhcCHHHHHHHHHH-HHHHHHhcCCceEEEEeee
Confidence            36668899999999999999999986543       35777765432 2 2333344444 4677889999999999999


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      -..++.+||||||=+-+|...+.+. ...++.-.++.|..|++.++.++|.+||||.||||.|+|+-+ |.+||+|||+|
T Consensus       429 Ev~d~~lYmvmE~Gd~DL~kiL~k~-~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA  506 (677)
T KOG0596|consen  429 EVTDGYLYMVMECGDIDLNKILKKK-KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIA  506 (677)
T ss_pred             eccCceEEEEeecccccHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechh
Confidence            9999999999999998888777654 344554589999999999999999999999999999999976 89999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCC--------CCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHH
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG--------PISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSV  267 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g--------~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i  267 (632)
                      ..+...+ ........+||+.||+||.+.....+        ..+.+||||||||+||+|+.|++||.... ....+..|
T Consensus       507 ~aI~~DT-TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI  585 (677)
T KOG0596|consen  507 NAIQPDT-TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAI  585 (677)
T ss_pred             cccCccc-cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhh
Confidence            8764432 12223456899999999998643222        25789999999999999999999997654 33344445


Q ss_pred             HhhccCCCCCCCCCHH-HHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          268 VIKKEKPCIPSGLPPA-VENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~-l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+...+||..-+.. +.++|..||+.||.+||++.+||.
T Consensus       586 ~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  586 TDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             cCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            4433444566554444 999999999999999999999986

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=295.38  Aligned_cols=253  Identities=26%  Similarity=0.419  Sum_probs=199.3

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--h--hhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--E--DCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +.+|++.+.||+|+||.||+|.+..++      ..||+|.+....  .  ......+..+..+++.+ +|++|+.+.+.+
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~   73 (264)
T cd06653           1 PVNWRLGKLLGRGAFGEVYLCYDADTG------RELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCL   73 (264)
T ss_pred             CCceeeeeeEccCCCeEEEEEEEcCCC------CEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEE
Confidence            468999999999999999999987655      489999875321  1  11111222233445555 689999999987


Q ss_pred             EEC--CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          118 VIN--GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       118 ~~~--~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ...  +.++++|||++ ++|.+.+...  +.+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg  151 (264)
T cd06653          74 RDPEEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG  151 (264)
T ss_pred             EcCCCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccc
Confidence            653  56899999998 4777777543  468999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++................|+..|+|||++.+.   .++.++|+|||||++|||++|+.||......+...++......+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  228 (264)
T cd06653         152 ASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE---GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP  228 (264)
T ss_pred             cccccccccccCccccccCCcccccCHhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCC
Confidence            987653221111222345689999999998743   57889999999999999999999998876665555555444556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+|..+++++.+++.+||. +|..||++.+++.
T Consensus       229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            6788999999999999999 5799999998775

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-36  Score=328.11  Aligned_cols=260  Identities=24%  Similarity=0.332  Sum_probs=219.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ..|..+++++.++||+|.||.|++|.|+..+.   ..-.||||.++..... ....|+++.. ++.++ +|+|+++|||+
T Consensus       105 clIpee~i~l~e~LG~GsFgvV~rg~Wt~psg---k~V~VAVKclr~d~l~~~mddflrEas-~M~~L-~H~hliRLyGv  179 (1039)
T KOG0199|consen  105 CLIPEEQIKLYELLGEGSFGVVKRGTWTQPSG---KHVNVAVKCLRDDSLNAIMDDFLREAS-HMLKL-QHPHLIRLYGV  179 (1039)
T ss_pred             eeccHHHHHHHHHhcCcceeeEeeccccCCCC---cEEeEEEEeccCCccchhHHHHHHHHH-HHHhc-cCcceeEEeee
Confidence            34667889999999999999999999987553   3358999999876544 4455666554 34444 79999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      ..+ ..+.+|||+++ |+|++.+.......|.......|+.|||.||.||.++++|||||..+|+||.....+||+||||
T Consensus       180 Vl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGL  258 (1039)
T KOG0199|consen  180 VLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGL  258 (1039)
T ss_pred             ecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccc
Confidence            765 68889999998 8999999886667899999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      .+.+..............-...|.|||.+.   +..++.+||+|+|||+||||+| |+.||.|.+..++++.|- .+++.
T Consensus       259 mRaLg~ned~Yvm~p~rkvPfAWCaPEsLr---h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erL  334 (1039)
T KOG0199|consen  259 MRALGENEDMYVMAPQRKVPFAWCAPESLR---HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERL  334 (1039)
T ss_pred             eeccCCCCcceEecCCCcCcccccCHhHhc---cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccC
Confidence            987744321111111112256899999997   5689999999999999999999 999999999999999887 67777


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .-|..||.++.+++..||..+|++||++..|.+
T Consensus       335 pRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  335 PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             CCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            789999999999999999999999999999974

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-35  Score=299.64  Aligned_cols=253  Identities=21%  Similarity=0.324  Sum_probs=197.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|.++.... .........+.+++..+ .|+||+.+.+++..++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~------~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~   73 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATG------EIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKG   73 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCC------cEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEECC
Confidence            47999999999999999999987655      4899999865322 11122223333444555 4999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..+++|||+++++++.+... ...+++.++..++.|++.||+|||+++++|+||||+||++++++.+||+|||++.....
T Consensus        74 ~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~  152 (288)
T cd07833          74 RLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA  152 (288)
T ss_pred             EEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence            99999999998888776544 35689999999999999999999999999999999999999999999999999876543


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc----------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK----------  271 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~----------  271 (632)
                      ...  .......++..|+|||++.+.  ..++.++|+||||+++|+|++|..||.+.+..+....+....          
T Consensus       153 ~~~--~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (288)
T cd07833         153 RPA--SPLTDYVATRWYRAPELLVGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL  228 (288)
T ss_pred             Ccc--ccccCcccccCCcCCchhcCC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhh
Confidence            221  122345678999999998743  257889999999999999999999998765443222211100          


Q ss_pred             ----------c----------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 ----------E----------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ----------~----------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                .          ...++..++.++.++|.+||..||++||+++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                      0          00123446899999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.8e-35  Score=300.69  Aligned_cols=247  Identities=27%  Similarity=0.468  Sum_probs=198.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||+|.+...... ....+.++ ..++..+ .|+||+.+++.+..++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e-~~~l~~~-~~~~i~~~~~~~~~~~   72 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTG------KIMAVKTIRLEINEAIQKQILRE-LDILHKC-NSPYIVGFYGAFYNNG   72 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCC------cEEEEEEEecccChHHHHHHHHH-HHHHHHC-CCCchhhhheeeecCC
Confidence            46888999999999999999987655      48999998764332 22333333 3444555 4999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ..+++|||+. ++|.+++.... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||++...
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~  151 (265)
T cd06605          73 DISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQL  151 (265)
T ss_pred             EEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhh
Confidence            9999999999 67777765543 688999999999999999999999 99999999999999999999999999988654


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhhccCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-----VEEIYHSVVIKKEKP  274 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-----~~ei~~~i~~~~~~p  274 (632)
                      ...     ......|+..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+     ..+....+. ....+
T Consensus       152 ~~~-----~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~  222 (265)
T cd06605         152 VNS-----LAKTFVGTSSYMAPERIQGN---DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPP  222 (265)
T ss_pred             HHH-----HhhcccCChhccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCC
Confidence            221     11125688999999998743   67889999999999999999999997642     223333332 23344


Q ss_pred             CCCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSG-LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~-lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+.. ++.++.++|.+||..||++||++.+++.
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            45554 8999999999999999999999999886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5e-35  Score=342.00  Aligned_cols=252  Identities=23%  Similarity=0.352  Sum_probs=194.9

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++++.||+|+||+||+|.+..++      ..||+|.+....  ......+.. +..++..+ .||||+.+++++.
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg------~~vAlKvIk~~~l~e~~~~~~~~-EI~IL~~L-~HPNIVrl~d~f~   82 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQ------EFFCWKAISYRGLKEREKSQLVI-EVNVMREL-KHKNIVRYIDRFL   82 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCC------eEEEEEEEeccccCHHHHHHHHH-HHHHHHHc-CCCCcCeEEEEEE
Confidence            3478999999999999999999988655      489999986432  222233333 33444554 6899999999875


Q ss_pred             E--CCEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-------CceeeeeeCCeEEEec--
Q 006772          119 I--NGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSI-------GLLVLNLKPSNLLLSE--  184 (632)
Q Consensus       119 ~--~~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~-------~IvHRDLKP~NILld~--  184 (632)
                      .  ...+||||||++ |+|.+++....  .+.+++..++.|+.||+.||.|||+.       +||||||||+||||+.  
T Consensus        83 de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~  162 (1021)
T PTZ00266         83 NKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI  162 (1021)
T ss_pred             ecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence            4  467999999998 68888876532  35799999999999999999999984       4999999999999964  


Q ss_pred             ---------------CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHH
Q 006772          185 ---------------HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML  249 (632)
Q Consensus       185 ---------------~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Eml  249 (632)
                                     .+.+||+|||+++.+....    ......||+.|+|||++.+. ...++.++|||||||+||||+
T Consensus       163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge-~~~~s~KSDVWSLG~ILYELL  237 (1021)
T PTZ00266        163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHE-TKSYDDKSDMWALGCIIYELC  237 (1021)
T ss_pred             cccccccccccccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhcc-CCCCCchhHHHHHHHHHHHHH
Confidence                           2358999999997653221    12345789999999998643 235788999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHhhccCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          250 TGIQPWFGKSVEEIYHSVVIKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       250 tG~~PF~~~~~~ei~~~i~~~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|..||...+........+.  ..+.+| ...+.++.+||.+||..+|.+||++.+++.
T Consensus       238 TGk~PF~~~~~~~qli~~lk--~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        238 SGKTPFHKANNFSQLISELK--RGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HCCCCCCcCCcHHHHHHHHh--cCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            99999987654333222222  223333 467899999999999999999999999984

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.2e-34  Score=292.88  Aligned_cols=249  Identities=23%  Similarity=0.356  Sum_probs=199.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      +|++.+.||.|+||.||+|.+..++      ..||+|.+....  ....+.+.. +..++..+ +|+|++.+++.+..  
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~-e~~~l~~l-~~~~i~~~~~~~~~~~   72 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDG------KILVWKEIDYGNMTEKEKQQLVS-EVNILREL-KHPNIVRYYDRIIDRS   72 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCC------CEEEEEEEecccCCHHHHHHHHH-HHHHHHhc-CCCccceeeeeeecCC
Confidence            5899999999999999999987655      479999986432  222222322 33444444 68999999887754  


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH-----hCCceeeeeeCCeEEEecCCcEEEE
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLH-----SIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLH-----s~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +...|++|||++ ++|.+.+....  ...+++..++.++.||+.||+|||     +.+++|+||||+||+++.++.+||+
T Consensus        73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~  152 (265)
T cd08217          73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLG  152 (265)
T ss_pred             CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEe
Confidence            457899999998 57777776532  467899999999999999999999     8999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||++.......   .......|++.|+|||++.+   ..++.++|+||||+++|+|++|..||...+..+....+. ..
T Consensus       153 d~g~~~~~~~~~---~~~~~~~~~~~~~~pE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~  225 (265)
T cd08217         153 DFGLAKILGHDS---SFAKTYVGTPYYMSPEQLNH---MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-EG  225 (265)
T ss_pred             cccccccccCCc---ccccccccCCCccChhhhcC---CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-cC
Confidence            999987653321   11223468999999999874   357889999999999999999999999887666555443 34


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+.++..++.++.+++.+||+.+|++||++.+|++
T Consensus       226 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         226 KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            445677889999999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=9.9e-35  Score=301.04  Aligned_cols=252  Identities=21%  Similarity=0.272  Sum_probs=196.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-h-HHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-C-AKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+...... . ...+.+ +..++..+ +|+|++.+++++..+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~i~~~~~~~~~~   73 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTN------ETIALKKIRLEQEDEGVPSTAIR-EISLLKEM-QHGNIVRLQDVVHSE   73 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCC------cEEEEEehhhccccccchHHHHH-HHHHHHhc-cCCCEeeEEEEEecC
Confidence            57999999999999999999987655      48999998643221 1 122333 33445555 789999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~DFGlak~~  199 (632)
                      +..|+||||+++++.+.+.......+++..++.++.||+.||+|||+++++||||||+||+++. ++.+||+|||++...
T Consensus        74 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         74 KRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             CeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            9999999999999888886654445788899999999999999999999999999999999985 567999999998754


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC------
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK------  273 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~------  273 (632)
                      ...   ........+++.|+|||.+.+.  ..++.++|+|||||++|+|++|..||...+..+....+......      
T Consensus       154 ~~~---~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  228 (294)
T PLN00009        154 GIP---VRTFTHEVVTLWYRAPEILLGS--RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW  228 (294)
T ss_pred             CCC---ccccccCceeecccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            221   1112234578899999988642  35788999999999999999999999887655444333211000      


Q ss_pred             -------------CC--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 -------------PC--------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 -------------p~--------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                   +.        .....++++.+++.+||+.||++||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence                         00        12356889999999999999999999999886

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-35  Score=304.71  Aligned_cols=256  Identities=21%  Similarity=0.276  Sum_probs=193.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .|++.+.||+|+||.||+|.+...    ..++.||+|.+....   ........++ ..++..+ +|+||+.+++++...
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~~   74 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNG----KDGKEYAIKKFKGDKEQYTGISQSACRE-IALLREL-KHENVVSLVEVFLEH   74 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCC----CCCCeEEEEEeccccccccCccHHHHHH-HHHHHhc-CCCCccceEEEEeCC
Confidence            488999999999999999998762    123589999997632   1212222232 3344444 689999999999887


Q ss_pred             --CEEEEEEecCCCCHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec----CCcEEEE
Q 006772          121 --GKICIAMKFYEGSVGDRIAQQRG---GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE----HDQLVLG  191 (632)
Q Consensus       121 --~~l~LVmEy~~GsL~d~l~~~~~---~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~----~g~vkL~  191 (632)
                        +.+|+||||+++++.+.+.....   ..+++..++.++.|++.||+|||+++|+||||||+|||++.    ++.+||+
T Consensus        75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~  154 (316)
T cd07842          75 ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIG  154 (316)
T ss_pred             CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEEC
Confidence              88999999999998888765432   37899999999999999999999999999999999999999    9999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH---------
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE---------  262 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e---------  262 (632)
                      |||+++................+|+.|+|||++.+.  ..++.++|+|||||++|||++|..||.+.....         
T Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  232 (316)
T cd07842         155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD  232 (316)
T ss_pred             CCccccccCCCcccccccCCccccccccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHH
Confidence            999988653322211222335678999999987642  247889999999999999999999998654321         


Q ss_pred             HHHHHHh------------------------hccCCCCC-----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          263 IYHSVVI------------------------KKEKPCIP-----------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       263 i~~~i~~------------------------~~~~p~~p-----------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....+..                        ......++           ...+.++.+++.+||+.||++||++.|++.
T Consensus       233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             HHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0000000                        00111111           156678999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.6e-34  Score=292.72  Aligned_cols=248  Identities=26%  Similarity=0.478  Sum_probs=201.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.|++|.+..... .....+.++ ...+..+ .|++++.+++++..++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~------~~~~vk~~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~~~   72 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTG------KIYALKKIHVDGDEEFRKQLLRE-LKTLRSC-ESPYVVKCYGAFYKEG   72 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCC------cEEEEEEeccCcchHHHHHHHHH-HHHHHhc-CCCCeeeEEEEEccCC
Confidence            47999999999999999999988755      4899999876543 222333333 3344444 4999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      .++++|||++ ++|.+++...  ..+++..++.++.|++.||+|||+ .+++||||+|+||+++.++.++|+|||++...
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~  150 (264)
T cd06623          73 EISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVL  150 (264)
T ss_pred             eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceec
Confidence            9999999999 6777777653  579999999999999999999999 99999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---CHHHHHHHHHhhccCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---SVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---~~~ei~~~i~~~~~~p~~  276 (632)
                      .....   ......++..|+|||.+...   .++.++|+||||+++|+|++|..||...   ...+....+. ....+..
T Consensus       151 ~~~~~---~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~  223 (264)
T cd06623         151 ENTLD---QCNTFVGTVTYMSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSL  223 (264)
T ss_pred             ccCCC---cccceeecccccCHhhhCCC---CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCC
Confidence            33211   11234678999999998643   6788999999999999999999999876   3344444443 3344555


Q ss_pred             CCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSG-LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~-lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.. ++..+.++|.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            666 8999999999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1e-34  Score=293.12  Aligned_cols=248  Identities=25%  Similarity=0.431  Sum_probs=199.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-----hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-----DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-----~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +|+..+.||+|+||.||+|.+..++      +.|++|.+.....     +..+.+.++ ..++..+ +|++++.+.+.+.
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~~~e-~~~l~~~-~h~~i~~~~~~~~   72 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDG------DFFAVKEVSLADDGQTGQEAVKQLEQE-IALLSKL-QHPNIVQYLGTER   72 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCC------cEEEEEEEEEccccccchHHHHHHHHH-HHHHHhc-CCCCchheeeeEe
Confidence            4778899999999999999987544      4899999865331     122233333 2344444 7899999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .+..+|++|||++| +|.+++...  ..+++..++.++.||+.||+|||+.+|+|+||||+||+++.++.+||+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~  150 (258)
T cd06632          73 EEDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAK  150 (258)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccce
Confidence            99999999999985 777776543  468999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......    ......|+..|++||.+...  ..++.++|+|||||++|+|++|..||......+....+......+.++
T Consensus       151 ~~~~~~----~~~~~~~~~~y~~pe~~~~~--~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T cd06632         151 QVVEFS----FAKSFKGSPYWMAPEVIAQQ--GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIP  224 (258)
T ss_pred             eccccc----cccccCCCcceeCHHHhcCC--CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcC
Confidence            653321    12345689999999998643  137889999999999999999999998776555444444334556677


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+++++.+++.+||+.||.+||++.+++.
T Consensus       225 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         225 DHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            889999999999999999999999999885

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=8.2e-35  Score=311.00  Aligned_cols=247  Identities=21%  Similarity=0.225  Sum_probs=192.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||.+.+..  ......+.+ +..++.. ..|+||+.+++++..
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-E~~~l~~-l~h~~iv~~~~~~~~   86 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTG------QNVAIKKLSRPFQNVTHAKRAYR-ELVLMKL-VNHKNIIGLLNVFTP   86 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCC------CEEEEEecCccccChhHHHHHHH-HHHHHHh-cCCCCCcceeeeecc
Confidence            478999999999999999999987655      489999986432  222223333 3334444 478999999988764


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +      ...|+||||+.+++.+.+..    .+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Df  162 (353)
T cd07850          87 QKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  162 (353)
T ss_pred             CCCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccC
Confidence            3      35799999999998887753    3899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++......    ......||..|+|||++.+   ..++.++|+|||||++|+|++|+.||...+....+..+......
T Consensus       163 g~~~~~~~~~----~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  235 (353)
T cd07850         163 GLARTAGTSF----MMTPYVVTRYYRAPEVILG---MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGT  235 (353)
T ss_pred             ccceeCCCCC----CCCCCcccccccCHHHHhC---CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9997653321    1223467899999999874   36889999999999999999999999877654433332211000


Q ss_pred             --------------------CC--------------C-------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 --------------------PC--------------I-------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 --------------------p~--------------~-------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          +.              +       +...+.++.++|.+||+.||++||++.|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                                00              0       1134667899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.4e-34  Score=295.97  Aligned_cols=253  Identities=24%  Similarity=0.396  Sum_probs=195.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------hHH---HHHHHHHHHhhhccCCCceeEee
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------CAK---VFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------~~~---~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      +|.+.+.||.|+||.||+|.+..++      +.||+|.+......      ...   +.+..+..++..+ +|+|++.++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~   74 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTG------EMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYL   74 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCC------ceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEE
Confidence            4788999999999999999876554      48999987532111      011   1122233344444 689999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++...+..++||||+. |+|.+++...  +.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+||
T Consensus        75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~  152 (272)
T cd06629          75 GFETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDF  152 (272)
T ss_pred             EEeccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeec
Confidence            99999999999999998 5777776543  57899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++..... ..........|+..|+|||.+.... ..++.++|+||||+++|||++|..||...+..+....+......
T Consensus       153 ~~~~~~~~~-~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  230 (272)
T cd06629         153 GISKKSDDI-YDNDQNMSMQGSVFWMAPEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA  230 (272)
T ss_pred             ccccccccc-ccccccccccCCccccCHHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence            998754321 1111123346889999999987432 24788999999999999999999999876655444333323333


Q ss_pred             CCCCC----CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIPS----GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p~----~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++.    .++.++.++|.+||..||.+||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         231 PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            33333    46899999999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=8.5e-35  Score=298.86  Aligned_cols=251  Identities=22%  Similarity=0.347  Sum_probs=196.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKIC  124 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~  124 (632)
                      |++.+.||+|+||.||+|.+..++      +.|+||.+.............++...+..+..|++++.+++++..++..+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   74 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETG------ELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELY   74 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCC------cEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEE
Confidence            678899999999999999987654      48999998654322111112223344556655999999999999999999


Q ss_pred             EEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       125 LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      +||||+.|++.+.+.......+++..++.++.|++.+|.|||+++++|+||||+||++++++.++|+|||+++...... 
T Consensus        75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-  153 (283)
T cd07830          75 FVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-  153 (283)
T ss_pred             EEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-
Confidence            9999999999998876554578999999999999999999999999999999999999999999999999987653321 


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC----------
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP----------  274 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p----------  274 (632)
                         ......|+..|+|||++...  ..++.++|+||||+++|||++|..||...+..+....+......+          
T Consensus       154 ---~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (283)
T cd07830         154 ---PYTDYVSTRWYRAPEILLRS--TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK  228 (283)
T ss_pred             ---CcCCCCCcccccCceeeecC--cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence               12234678999999988532  347889999999999999999999998776544333222110000          


Q ss_pred             ------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 ------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                        ......+.++.++|++||+.||++||++.|++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                              001123688999999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=8.9e-35  Score=301.62  Aligned_cols=251  Identities=20%  Similarity=0.260  Sum_probs=195.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh----hHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED----CAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~----~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +|++.+.||+|+||.||+|.+..++      +.||||.+......    ........+..++..+ +|+||+.+++++..
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~   73 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETG------RIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGH   73 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCC------cEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeec
Confidence            4889999999999999999987655      48999999754321    1112222233444444 59999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++..++||||+.|+|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+|||++.++.++|+|||+++..
T Consensus        74 ~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  152 (298)
T cd07841          74 KSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSF  152 (298)
T ss_pred             CCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence            99999999999888888875432 37999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC------
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK------  273 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~------  273 (632)
                      ....   .......+++.|+|||.+.+.  ..++.++|+|||||++|||++|.+||.+.+..+....+......      
T Consensus       153 ~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (298)
T cd07841         153 GSPN---RKMTHQVVTRWYRAPELLFGA--RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW  227 (298)
T ss_pred             cCCC---ccccccccceeeeCHHHHhCC--CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence            3321   112233568899999988532  35788999999999999999998888876654443333211000      


Q ss_pred             ---------------CC-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ---------------PC-----IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ---------------p~-----~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                     +.     .....+.++.++|.+||+.||++||++.|++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             hhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence                           00     11345788999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.9e-34  Score=296.75  Aligned_cols=248  Identities=23%  Similarity=0.366  Sum_probs=198.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +-|++.+.||+|+||.||+|.+..++      ..||||.+.............++...+..+ +|+||+.+++.+..++.
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~   76 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQ------KVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTK   76 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCC------cEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCe
Confidence            34788899999999999999887654      489999876433222222223333344444 78999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||+.| ++.+++.   ...+++..+..++.|++.+|.|||+++++|+||||+||+++.++.++|+|||++.....
T Consensus        77 ~~lv~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06641          77 LWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  153 (277)
T ss_pred             EEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence            9999999985 6665553   24789999999999999999999999999999999999999999999999999876533


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      ..   .......|+..|+|||.+.+   ..++.++|+|||||++|+|++|..||...........+. ....+.++..++
T Consensus       154 ~~---~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (277)
T cd06641         154 TQ---IKRNTFVGTPFWMAPEVIKQ---SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-KNNPPTLEGNYS  226 (277)
T ss_pred             ch---hhhccccCCccccChhhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh-cCCCCCCCcccC
Confidence            21   11223467899999999863   357789999999999999999999998877655554433 344555677889


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++.+++.+||+.||.+||++.+++.
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         227 KPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            99999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.1e-35  Score=303.46  Aligned_cols=248  Identities=23%  Similarity=0.370  Sum_probs=197.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|+..+.||+|+||.||+|.+..++      ..||+|.+...........+..+..++..+ +|+||+.+++.+..++.
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   76 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTK------EVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTK   76 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCC------eEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCc
Confidence            35667788999999999999886544      489999986443222222233333445554 69999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++| +|.+.+.   .+.+++..+..++.|++.||.|||+++++|+||+|+||++++++.++|+|||++.....
T Consensus        77 ~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06642          77 LWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             eEEEEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccC
Confidence            9999999985 6666553   35789999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      ..   .......|+..|+|||++.+.   .++.++|+|||||++|||++|..||...........+. ....+..+..++
T Consensus       154 ~~---~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (277)
T cd06642         154 TQ---IKRNTFVGTPFWMAPEVIKQS---AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYS  226 (277)
T ss_pred             cc---hhhhcccCcccccCHHHhCcC---CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-cCCCCCCCcccC
Confidence            21   112234678999999998743   57889999999999999999999998766555443332 234455566788


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++.+++.+||+.+|++||++.++++
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            99999999999999999999999996

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-34  Score=295.26  Aligned_cols=250  Identities=18%  Similarity=0.246  Sum_probs=195.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhcc--CCCceeEeeEEEEECC
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFR--ESQSVCWLHGISVING  121 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~--~h~~I~~l~~~~~~~~  121 (632)
                      |++.+.||+|+||.||+|.++.++      +.||+|.+....... .......+..++..+.  .|++++.+.+++...+
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   74 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTG------RFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR   74 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCC------CEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence            678999999999999999987644      489999997432211 1111222223333332  6999999999998877


Q ss_pred             E-----EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          122 K-----ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       122 ~-----l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .     ++++|||+.+++.+++.......+++..++.++.|++.||+|||+++++|+||||+|||++.++.++|+|||++
T Consensus        75 ~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~  154 (287)
T cd07838          75 TDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLA  154 (287)
T ss_pred             CCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence            6     99999999999988887654457999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--  274 (632)
                      .......    ......++..|+|||++.+.   .++.++|+|||||++|||++|.+||.+.+..+....+......+  
T Consensus       155 ~~~~~~~----~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07838         155 RIYSFEM----ALTSVVVTLWYRAPEVLLQS---SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSE  227 (287)
T ss_pred             eeccCCc----ccccccccccccChHHhccC---CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCCh
Confidence            7653221    11223578899999998743   57889999999999999999999999887666555543211100  


Q ss_pred             ------------CC-----------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 ------------CI-----------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ------------~~-----------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                  .+           ...+++.+.++|.+||+.||.+||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                        00           0234578899999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=9.3e-35  Score=293.75  Aligned_cols=255  Identities=24%  Similarity=0.368  Sum_probs=198.6

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      ||.|+||.||+|.+..++      ..|++|.+......  ........+..++..+ .|+|++.+++.+..+...|++||
T Consensus         1 lg~g~~~~vy~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e   73 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTG------DIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVME   73 (265)
T ss_pred             CCCCCceEEEEEEECCCC------CEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEe
Confidence            689999999999987655      48999998654321  1112222223444554 59999999999999999999999


Q ss_pred             cCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC--
Q 006772          129 FYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS--  205 (632)
Q Consensus       129 y~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~--  205 (632)
                      |+.| +|.+++...  +.+++..++.++.||+.||+|||+++++|+||+|+|||+++++.++|+|||++.........  
T Consensus        74 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  151 (265)
T cd05579          74 YLPGGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL  151 (265)
T ss_pred             cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence            9985 777777543  37899999999999999999999999999999999999999999999999998754322110  


Q ss_pred             ---CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC--
Q 006772          206 ---DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL--  280 (632)
Q Consensus       206 ---~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l--  280 (632)
                         ........++..|++||.+...   .++.++|+||||+++|+|++|..||......+....+..  .....|..+  
T Consensus       152 ~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~  226 (265)
T cd05579         152 NDDEKEDKRIVGTPDYIAPEVILGQ---GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GKIEWPEDVEV  226 (265)
T ss_pred             ccccccccCcccCccccCHHHhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcCCCccccC
Confidence               1122334678899999998643   478899999999999999999999998888777766553  233344444  


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                      +..+.+++.+||+.+|.+||++.++.+.|+   ++++.+.+|
T Consensus       227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~---~~~~~~~~~  265 (265)
T cd05579         227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKN---HPFFKGIDW  265 (265)
T ss_pred             CHHHHHHHHHHhcCCHhhcCCCccHHHHhc---CccccCCCC
Confidence            999999999999999999999944443332   667777766

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-35  Score=323.74  Aligned_cols=246  Identities=26%  Similarity=0.392  Sum_probs=200.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEe
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMK  128 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmE  128 (632)
                      -.||+|+||+||-|++..+.      ..+|||-+........+- +.++.. +-+-..|.||+++.|.+..++.+-|.||
T Consensus       581 vVLGKGTYG~VYA~RD~~tq------vrIaIKEIpekdsr~~QP-LhEEIa-LH~~LrHkNIVrYLGs~senGf~kIFME  652 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQ------VRIAIKEIPEKDSREVQP-LHEEIA-LHSTLRHKNIVRYLGSVSENGFFKIFME  652 (1226)
T ss_pred             EEeecCceeEEEeeccccce------eEEEeeecccccchhhcc-HHHHHH-HHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence            36899999999999998776      479999986544333222 222223 3333478999999999999999999999


Q ss_pred             cCCC-CHHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-cCCcEEEEecCCceeccCCCC
Q 006772          129 FYEG-SVGDRIAQQRGGKL--PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-EHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       129 y~~G-sL~d~l~~~~~~~l--~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-~~g~vkL~DFGlak~~~~~~~  204 (632)
                      -++| +|.+++.. +=+++  .+.+.-+|.+||++||.|||.+.|||||||-.|+|++ -.|.+||+|||-++.+.+-  
T Consensus       653 qVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--  729 (1226)
T KOG4279|consen  653 QVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--  729 (1226)
T ss_pred             cCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC--
Confidence            9995 66666654 44677  8899999999999999999999999999999999998 5799999999999887543  


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhccCCCCCCCCCHH
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVVIKKEKPCIPSGLPPA  283 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~i~~~~~~p~~p~~lp~~  283 (632)
                       ...+.++.||..|||||++.... ..|..++|||||||++.||.||++||... ++.....++-.-+.-|++|..++.+
T Consensus       730 -nP~TETFTGTLQYMAPEvIDqG~-RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsae  807 (1226)
T KOG4279|consen  730 -NPCTETFTGTLQYMAPEVIDQGP-RGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAE  807 (1226)
T ss_pred             -CccccccccchhhhChHhhccCC-cCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHH
Confidence             22334578999999999997543 35899999999999999999999999864 3443333444446678899999999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          284 VENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.+|.+|++.||.+||++.++|.
T Consensus       808 ak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  808 AKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHcCCCcccCccHHHhcc
Confidence            999999999999999999999886

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-34  Score=298.34  Aligned_cols=250  Identities=22%  Similarity=0.284  Sum_probs=195.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      |++.+.||.|++|.||+|.+..++      ..||+|++......  ....+.++. ..+..+ .|++++++++++..++.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~E~-~~l~~l-~~~~iv~~~~~~~~~~~   72 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTG------EIVALKKIRLETEDEGVPSTAIREI-SLLKEL-NHPNIVRLLDVVHSENK   72 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCC------CEEEEEEeecccccccchhHHHHHH-HHHHhc-CCCCccCHhheeccCCe
Confidence            677899999999999999987655      48999998653311  112333333 344444 69999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      .|++|||++++|.+++.......+++..++.++.|++.||+|||+++++||||+|+|||++.++.++|+|||+++.....
T Consensus        73 ~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~  152 (283)
T cd07835          73 LYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP  152 (283)
T ss_pred             EEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC
Confidence            99999999999988887654457899999999999999999999999999999999999999999999999998754221


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc----------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE----------  272 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~----------  272 (632)
                         ........++..|+|||++.+.  ..++.++|+||||+++|+|++|..||.+.+.......+.....          
T Consensus       153 ---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (283)
T cd07835         153 ---VRTYTHEVVTLWYRAPEILLGS--RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV  227 (283)
T ss_pred             ---ccccCccccccCCCCCceeecC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence               1112223568899999987642  2468899999999999999999999988765443322221100          


Q ss_pred             -----------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 -----------------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 -----------------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                       .......++.++.++|.+||+.||++||++++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         228 TSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                             00112457789999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.3e-34  Score=292.97  Aligned_cols=245  Identities=21%  Similarity=0.338  Sum_probs=185.6

Q ss_pred             eEEcccCceEEEEEEEcCCCCC----cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADD----FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKIC  124 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~----~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~  124 (632)
                      +.||+|+||.||+|.+..+...    ......|++|.+...... ...+.++. .++..+ +|+||+.+++++.. +..+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~-~~~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETA-SLMSQL-SHKHLVKLYGVCVR-DENI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHH-HHHHcC-CCcchhheeeEEec-CCcE
Confidence            4699999999999998765411    011235888877644332 33333333 344444 79999999998877 7789


Q ss_pred             EEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-------cEEEEecCCc
Q 006772          125 IAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-------QLVLGDFGIP  196 (632)
Q Consensus       125 LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-------~vkL~DFGla  196 (632)
                      +||||+. |+|.+++... ...+++..+..++.||+.||+|||+++|+||||||+|||++.++       .+||+|||++
T Consensus        77 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          77 MVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            9999998 5666666543 33789999999999999999999999999999999999999888       8999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      .....       .....++..|+|||++... ...++.++|+|||||++|||++ |..||...+..+......   ....
T Consensus       156 ~~~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~~  224 (259)
T cd05037         156 ITVLS-------REERVERIPWIAPECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQHR  224 (259)
T ss_pred             ccccc-------ccccccCCCccChhhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCCC
Confidence            76432       1223567889999998743 1357889999999999999999 688887765443332222   1222


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF  309 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~L  309 (632)
                      .+.....++.++|.+||..||.+||++.++++.|
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         225 LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            2333348999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.3e-34  Score=294.16  Aligned_cols=258  Identities=22%  Similarity=0.377  Sum_probs=197.5

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      |++.+.||+|+||.||+|.+....   ..+..||||++....  ....+.+.++. .++..+ +|+|++.+++++.... 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~-~~l~~l-~h~~i~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSED---GSFQKVAVKMLKADIFSSSDIEEFLREA-ACMKEF-DHPNVIKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccC---CCceEEEEEEeccccCChHHHHHHHHHH-HHHhcC-CCCCcceEEEEEccCCC
Confidence            577889999999999999876532   234689999986532  22233333333 445555 6899999999876532 


Q ss_pred             -----EEEEEEecCC-CCHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          122 -----KICIAMKFYE-GSVGDRIAQQR----GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       122 -----~l~LVmEy~~-GsL~d~l~~~~----~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                           ..++++||+. |++.+++....    ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~  155 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVA  155 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEEC
Confidence                 3478899998 67666654321    1357889999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+++........ .......+++.|++||.+...   .++.++|+|||||++|||++ |..||.+.+..+.+..+.. 
T Consensus       156 dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~---~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-  230 (273)
T cd05074         156 DFGLSKKIYSGDYY-RQGCASKLPVKWLALESLADN---VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK-  230 (273)
T ss_pred             cccccccccCCcce-ecCCCccCchhhcCHhHHhcC---ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc-
Confidence            99998765322111 111123456789999998633   57889999999999999999 8999988877666655543 


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ......+...+..+.+++.+||+.+|++||++.+++..|+.+
T Consensus       231 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         231 GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            334445667889999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=3.3e-34  Score=301.41  Aligned_cols=248  Identities=21%  Similarity=0.312  Sum_probs=198.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .|...++||+|+||.||+|.+..++      ..|++|.+.....   .....+.++ ..++..+ +|+|++.+++++..+
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~~~~   93 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTN------EVVAVKKMSYSGKQTNEKWQDIIKE-VKFLQQL-KHPNTIEYKGCYLKE   93 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCC------cEEEEEEEeccccCchHHHHHHHHH-HHHHHhC-CCCCCccEEEEEEeC
Confidence            4777888999999999999986654      4899999864322   222233333 3444554 689999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ...|++|||+.|++.+.+... ...+++.+++.++.||+.||.|||+++++|+||||+||+++.++.++|+|||++....
T Consensus        94 ~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633          94 HTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS  172 (313)
T ss_pred             CEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence            999999999999988887653 4578999999999999999999999999999999999999999999999999875321


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                             ......|+..|+|||++.....+.++.++|+|||||++|||++|..||...+.......+............+
T Consensus       173 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (313)
T cd06633         173 -------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW  245 (313)
T ss_pred             -------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCcccc
Confidence                   1223568999999999854323467889999999999999999999998877555444443322222233467


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+.+++.+||+++|.+||++.+++.
T Consensus       246 ~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         246 TDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            889999999999999999999999886

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.6e-34  Score=300.29  Aligned_cols=256  Identities=21%  Similarity=0.280  Sum_probs=192.4

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||.+...... ........+..+++.+ .|++|+.+++++...
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~   83 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTK------QIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTK   83 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCC------cEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEecc
Confidence            468999999999999999999987655      48999988643211 1111112223444444 789999999987654


Q ss_pred             C--------EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          121 G--------KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       121 ~--------~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      +        ..++||||+.+++.+.+... ...+++.+++.++.||+.||+|||+++++|+||||+|||++.++.+||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~d  162 (310)
T cd07865          84 ATPYNRYKGSFYLVFEFCEHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLAD  162 (310)
T ss_pred             cccccCCCceEEEEEcCCCcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECc
Confidence            3        46999999999888877543 34789999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCC-CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          193 FGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       193 FGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      ||++......... ........++..|+|||.+.+.  ..++.++|+||||+++|||++|..||.+.+.......+....
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~  240 (310)
T cd07865         163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC  240 (310)
T ss_pred             CCCcccccCCcccCCCCccCcccCccccCcHHhcCC--cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            9999765332211 1112334678899999988643  236789999999999999999999998876544332222110


Q ss_pred             cC--C---------------CCC-------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EK--P---------------CIP-------------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~--p---------------~~p-------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..  +               .++             ...+..+.++|.+||..||.+||+++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            00  0               001             123567889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=5.3e-34  Score=284.93  Aligned_cols=247  Identities=23%  Similarity=0.448  Sum_probs=198.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      +|++.+.||+|+||.||++.+..++      ..+++|++..........+.++. ..+..+ .|+++..+.+.+..++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~e~-~~l~~l-~~~~i~~~~~~~~~~~~~   72 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTG------KEVAIKVIKLESKEKKEKIINEI-QILKKC-KHPNIVKYYGSYLKKDEL   72 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCC------cEEEEEEecccchhHHHHHHHHH-HHHHhC-CCCCEeEEEEEEecCCeE
Confidence            5889999999999999999987654      48999999765443333444433 444554 499999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      +++|||++ ++|.+.+... ...+++..+..++.|++.||.|||+++++|+||+|+||++++++.++|+|||++......
T Consensus        73 ~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          73 WIVMEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             EEEEecCCCCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            99999999 5776666543 257899999999999999999999999999999999999999999999999998765332


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC--C
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG--L  280 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~--l  280 (632)
                      ..    .....|+..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....... ...+..+..  +
T Consensus       152 ~~----~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~  223 (253)
T cd05122         152 KA----RNTMVGTPYWMAPEVINGK---PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKW  223 (253)
T ss_pred             cc----ccceecCCcccCHHHHcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCccccc
Confidence            11    2345688999999998743   478899999999999999999999988755444333332 333333333  4


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+.++|.+||+.||++||++.+++.
T Consensus       224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         224 SDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            899999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.9e-34  Score=291.47  Aligned_cols=249  Identities=25%  Similarity=0.434  Sum_probs=199.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.++.++      ..||+|.+.....  .....+ ..+..+++.+ .|+|++.+++.+..++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~-~~E~~~l~~~-~h~~i~~~~~~~~~~~   72 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDS------EHCVIKEIDLTKMPVKEKEAS-KKEVILLAKM-KHPNIVTFFASFQENG   72 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCC------ceEEEEEeeHhhccchhhHHH-HHHHHHHHhC-CCCChhhhhheeccCC
Confidence            5899999999999999999987655      3799999864311  122222 3333444544 6899999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCceec
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGlak~~  199 (632)
                      ..+++|||+. ++|.+++.......+++..++.++.|++.||.|||+++++|+||||+||++++++ .++|+|||++...
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (257)
T cd08225          73 RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL  152 (257)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence            9999999997 5888887765555689999999999999999999999999999999999999886 4699999988765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ....   .......|++.|+|||++..   ..++.++|+||||+++|||++|..||...+..+....+.. ...+..+..
T Consensus       153 ~~~~---~~~~~~~~~~~~~ape~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~  225 (257)
T cd08225         153 NDSM---ELAYTCVGTPYYLSPEICQN---RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ-GYFAPISPN  225 (257)
T ss_pred             cCCc---ccccccCCCccccCHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-ccCCCCCCC
Confidence            3211   11123458999999999863   3578899999999999999999999988776665554432 333445667


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+.++.++|.+||..+|++||++.++++
T Consensus       226 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         226 FSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            8899999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-35  Score=317.31  Aligned_cols=262  Identities=19%  Similarity=0.325  Sum_probs=211.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+.++.+.++++||+|.||+|.+++-..       ...||+|++++.........+.++..++.++ +||||+.+.++|.
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg-------~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~  605 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG-------PLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCV  605 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecC-------ceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeee
Confidence            4667889999999999999999998543       3589999999887766644444455666777 8999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++.+|++||||+ |+|.+++..+.-..+.-.....++.||+.||+||.+.++|||||.+.|+|+|.++++||+|||.++
T Consensus       606 ~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  606 QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccc
Confidence            9999999999998 888888876532233445667799999999999999999999999999999999999999999988


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh--CCCCCCCCCHHHHHHHHHh---h--
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT--GIQPWFGKSVEEIYHSVVI---K--  270 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt--G~~PF~~~~~~ei~~~i~~---~--  270 (632)
                      -+-....... ....+-.++|||||.+.   -+++|.+||+|+||+++||+++  .+.||...+.+++......   .  
T Consensus       686 ~lysg~yy~v-qgr~vlpiRwmawEsil---lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~  761 (807)
T KOG1094|consen  686 NLYSGDYYRV-QGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQG  761 (807)
T ss_pred             ccccCCceee-ecceeeeeeehhHHHHH---hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCC
Confidence            5432211110 11123368999999986   5689999999999999999876  8999998887766554321   1  


Q ss_pred             -ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          271 -KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       271 -~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                       ..-+..|..||..+.++|.+||.+|-.+||+++++...|++.
T Consensus       762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence             122346788999999999999999999999999999887653

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.9e-34  Score=294.90  Aligned_cols=241  Identities=18%  Similarity=0.304  Sum_probs=189.3

Q ss_pred             CCeEEEeEE--cccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRI--GRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~I--G~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.+  |+|+||.||++.++.++      ..+|+|.+.+......+.      .....+.+|+|++.+++.+..+
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~e~------~~~~~~~~h~~iv~~~~~~~~~   81 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQ------KLFVQKIIKAKNFNAIEP------MVHQLMKDNPNFIKLYYSVTTL   81 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCC------cEEEEEEEehhhcchhhH------HHHHHhhcCCCEEEEEEEEecC
Confidence            356666655  99999999999987765      479999986532211111      1111234799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCcee
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYL  198 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGlak~  198 (632)
                      +..|+||||++ |+|.+++...  ..+++.+++.++.|++.||+|||+.+++||||||+||+++.++ .++|+|||+++.
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         82 KGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             CeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            99999999997 6888877543  3899999999999999999999999999999999999999998 999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHH-HHH-HhhccCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY-HSV-VIKKEKPCI  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~-~~i-~~~~~~p~~  276 (632)
                      ....       ....|+..|+|||++.+   ..++.++|+||||+++|||++|..||.......+. ... .........
T Consensus       160 ~~~~-------~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  229 (267)
T PHA03390        160 IGTP-------SCYDGTLDYFSPEKIKG---HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF  229 (267)
T ss_pred             cCCC-------ccCCCCCcccChhhhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCc
Confidence            4321       22457899999999874   36788999999999999999999999865433221 111 111233345


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCC-HHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPL-MADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs-~~ell~  307 (632)
                      +..+++.+.++|.+||+.||.+||+ ++++++
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        230 IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            5679999999999999999999995 688875

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-37  Score=351.93  Aligned_cols=253  Identities=27%  Similarity=0.414  Sum_probs=204.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      .+-...||.|.||.||-|.+..+++      ..|+|-++-.... ..-....++..++.. ..|||++.++|+-...+.+
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGe------llAvKEI~iq~~~~k~~~~i~eEm~vlE~-lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGE------LLAVKEIKIQDSDHKTFKLIAEEMKVLEG-LNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccc------hhhhhhhhcCccccccCcchHHHHHHHHh-ccCccccccCceeecHHHH
Confidence            4556789999999999999887765      6788877543222 111112333344443 4899999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      +|.||||+ |+|.+++.+  ++-.++.....|..|++.|+.|||++|||||||||+||||+.+|.+|++|||.|..+...
T Consensus      1310 ~IFMEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHHHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            99999998 677776643  345677788889999999999999999999999999999999999999999999876543


Q ss_pred             C-CCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhccCCCCCCCC
Q 006772          203 S-LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       203 ~-~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~~~p~~p~~l  280 (632)
                      . ..+.......||+.|||||++.+........+.|||||||++.||+||+.||...+.+ ++...+ ..+..|++|..+
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V-~~gh~Pq~P~~l 1466 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV-AAGHKPQIPERL 1466 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH-hccCCCCCchhh
Confidence            2 1223344568999999999998765455667999999999999999999999886644 444443 457889999999


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++-+++|.+||+.||+.|.++.+|++
T Consensus      1467 s~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1467 SSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             hHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            999999999999999999999988886

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=7.7e-35  Score=303.20  Aligned_cols=247  Identities=21%  Similarity=0.356  Sum_probs=194.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|.....||+|+||.||++.+..++      ..||||.+..........+.++. ..+..+ +|+|++.+++.+..++.
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~ii~~~~~~~~~~~   93 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTG------KQVAVKKMDLRKQQRRELLFNEV-VIMRDY-HHENVVDMYNSYLVGDE   93 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCC------CEEEEEEEecchHHHHHHHHHHH-HHHHhC-CCCcHHHHHHheecCCe
Confidence            45666788999999999999886554      48999998654433333343433 344444 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|++|||++| ++.+++.   .+.+++.+++.++.||+.||+|||+++|+||||||+||++++++.++|+|||++.....
T Consensus        94 ~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~  170 (292)
T cd06658          94 LWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK  170 (292)
T ss_pred             EEEEEeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccc
Confidence            9999999986 5555442   24689999999999999999999999999999999999999999999999999865422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~~  279 (632)
                      .   ........|+..|+|||.+.+   ..++.++|+||||+++|||++|..||...+..+....+.. ...+.  ....
T Consensus       171 ~---~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~  243 (292)
T cd06658         171 E---VPKRKSLVGTPYWMAPEVISR---LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD-NLPPRVKDSHK  243 (292)
T ss_pred             c---cccCceeecCccccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCccccccc
Confidence            1   111233568999999999864   3578899999999999999999999998776655444332 11222  2235


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+..+.+++.+||..||.+||+++++++
T Consensus       244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         244 VSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            7889999999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1.6e-34  Score=295.15  Aligned_cols=252  Identities=24%  Similarity=0.399  Sum_probs=204.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|++.+..  ..........+..++..+..|+||+.+++++..+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   74 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETN------KEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE   74 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCC------CEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC
Confidence            47999999999999999999987654      489999986522  1222233334445566665699999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..+++|||++ ++|.+.+...  +.+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~  152 (280)
T cd05581          75 ENLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVL  152 (280)
T ss_pred             ceEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence            99999999996 6787777543  47999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCC-----------------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH
Q 006772          200 LGRSLSD-----------------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE  262 (632)
Q Consensus       200 ~~~~~~~-----------------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e  262 (632)
                      .......                 .......|+..|+|||++..   ..++.++|+||||++++++++|..||...+...
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  229 (280)
T cd05581         153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE---KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL  229 (280)
T ss_pred             CCccccccCCCCCccccccccccccccccccCCccccCHHHhCC---CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence            4332110                 11223467899999999864   357889999999999999999999999887666


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH----HHHHH
Q 006772          263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM----ADILH  307 (632)
Q Consensus       263 i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~----~ell~  307 (632)
                      .+..+.  .....+|..+++.+.++|.+||+.||.+||++    .+++.
T Consensus       230 ~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         230 TFQKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            555544  34455778899999999999999999999999    77664

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.4e-34  Score=305.00  Aligned_cols=252  Identities=21%  Similarity=0.287  Sum_probs=199.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      ..||||.+.....  ...+.+.+ +...+..+ +|+||+.+.+++...+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~-e~~~l~~l-~~~~i~~~~~~~~~~~   72 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTG------RKVAIKKISNVFDDLIDAKRILR-EIKLLRHL-RHENIIGLLDILRPPS   72 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCC------cEEEEEeeccccccchhhhhHHH-HHHHHHhc-CCcchhhhhhhhcccC
Confidence            5899999999999999999987654      4899999876432  22223333 33444444 6999999999887764


Q ss_pred             -----EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          122 -----KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       122 -----~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                           .+|++|||+++++.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||++
T Consensus        73 ~~~~~~~~lv~e~~~~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~  150 (330)
T cd07834          73 PEDFNDVYIVTELMETDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLA  150 (330)
T ss_pred             cccccceEEEecchhhhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence                 7899999999988877754  348999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-  275 (632)
                      .................++..|+|||++.+..  .++.++|+||||+++|+|++|..||.+.+..+.+..+......+. 
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  228 (330)
T cd07834         151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSS--RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSE  228 (330)
T ss_pred             EeecccccccccccccccccCcCCceeeeccc--CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCCh
Confidence            87644321112233446789999999987531  578899999999999999999999998876665554443211111 


Q ss_pred             ----------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 ----------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ----------------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                  ....+++++.++|.+||+.||.+||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                                        12346889999999999999999999999886

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=2.3e-34  Score=301.68  Aligned_cols=249  Identities=20%  Similarity=0.316  Sum_probs=198.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +.|...+.||+|+||.||+|.+..++      ..+|+|.+....   ......+.++ ..++..+ +|+|++.+.+++..
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~   86 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNS------EVVAIKKMSYSGKQSNEKWQDIIKE-VRFLQKL-RHPNTIQYRGCYLR   86 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCC------cEEEEEEEecccccChHHHHHHHHH-HHHHHhC-CCCCcccEEEEEEc
Confidence            55888899999999999999987654      479999986422   1222233333 2344444 78999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++..++||||+.|++.+.+... ...+++.+++.++.|++.||.|||+++++||||||+|||++.++.++|+|||++...
T Consensus        87 ~~~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  165 (308)
T cd06634          87 EHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (308)
T ss_pred             CCeeEEEEEccCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence            9999999999999888877543 357899999999999999999999999999999999999999999999999998764


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ..       .....|++.|+|||++.....+.++.++|+|||||++|+|++|..||...+..+....+.........+..
T Consensus       166 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  238 (308)
T cd06634         166 AP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH  238 (308)
T ss_pred             cC-------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCccc
Confidence            32       12346789999999975332345788999999999999999999999887655544443322222223457


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++..+.++|.+||+.+|++||++.++++
T Consensus       239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~  266 (308)
T cd06634         239 WSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (308)
T ss_pred             ccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence            8899999999999999999999999887

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.3e-34  Score=293.96  Aligned_cols=245  Identities=22%  Similarity=0.328  Sum_probs=196.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +|++.+.||.|+||.||+|.+..++      ..||+|.+.+...   .....+.++ ...+..+ +|+||+.+++.+..+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~~   72 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTK------KMFAMKYMNKQKCVEKGSVRNVLNE-RRILQEL-NHPFLVNLWYSFQDE   72 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCC------cEEEEEEEehhhhcchhHHHHHHHH-HHHHHhC-CCCChHHHHHhhcCC
Confidence            5899999999999999999987655      4899999865322   222333333 3344444 789999999999989


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..|+||||+.| +|.+.+...  ..+++..+..++.||+.||.|||+++++|+||||+||++++++.++|+|||++...
T Consensus        73 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~  150 (258)
T cd05578          73 ENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKV  150 (258)
T ss_pred             CeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeeccccccc
Confidence            999999999985 666666543  58999999999999999999999999999999999999999999999999988764


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhhccCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV---EEIYHSVVIKKEKPCI  276 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~---~ei~~~i~~~~~~p~~  276 (632)
                      ....    ......|+..|+|||.+...   .++.++|+||||+++|+|++|..||...+.   .+.... .. ...+.+
T Consensus       151 ~~~~----~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~  221 (258)
T cd05578         151 TPDT----LTTSTSGTPGYMAPEVLCRQ---GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK-QE-TADVLY  221 (258)
T ss_pred             CCCc----cccccCCChhhcCHHHHccc---CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH-hc-cccccC
Confidence            3221    22345688999999998744   478899999999999999999999998763   333222 21 255667


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCH--HHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLM--ADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~--~ell~  307 (632)
                      |..++.++.++|++||+.||.+||++  .|+++
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         222 PATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             cccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            88899999999999999999999999  66553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.3e-34  Score=302.29  Aligned_cols=248  Identities=22%  Similarity=0.368  Sum_probs=195.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|.....||+|+||.||+|.+..++      +.||+|.+..........+.++ ..++..+ +|+|++.+++.+..++.
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e-~~~l~~l-~hp~i~~~~~~~~~~~~   92 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSG------RQVAVKMMDLRKQQRRELLFNE-VVIMRDY-QHQNVVEMYKSYLVGEE   92 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCC------CEEEEEEEEecccchHHHHHHH-HHHHHhC-CCCchhhhhhheeeCCe
Confidence            45566678999999999999987554      4899999865433333333333 3344444 68999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|++|||++| ++.+.+.   ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.++|+|||++.....
T Consensus        93 ~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~  169 (297)
T cd06659          93 LWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  169 (297)
T ss_pred             EEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence            9999999995 5555443   24689999999999999999999999999999999999999999999999999865422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p~~p~~l  280 (632)
                      ..   .......|+..|+|||++.+   ..++.++|+|||||++|||++|+.||...+..+....+.... .....+..+
T Consensus       170 ~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
T cd06659         170 DV---PKRKSLVGTPYWMAPEVISR---TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKI  243 (297)
T ss_pred             cc---ccccceecCccccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCC
Confidence            11   11233568999999999864   357889999999999999999999998877666554433211 112233567


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.++.++|.+||+.||.+||++.+++.
T Consensus       244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         244 SPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            899999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.4e-34  Score=285.60  Aligned_cols=249  Identities=26%  Similarity=0.491  Sum_probs=204.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+..++      ..|++|.+.....  .....+. .+.+.+..+ +|+|++.+.+.+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~-~e~~~l~~l-~~~~~~~~~~~~~~~~   72 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDG------KLYVLKEIDLSNMSEKEREDAL-NEVKILKKL-NHPNIIKYYESFEEKG   72 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCC------cEEEEEEeecccCChHHHHHHH-HHHHHHHhc-CCCChhheEEEEecCC
Confidence            5899999999999999999987654      4899999875432  2223333 333444554 5999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEG-SVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..+++|||++| +|.+.+....  +..+++..++.++.+++.||.|||+++++|+||+|+||+++.++.++|+|||++..
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~  152 (258)
T cd08215          73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKV  152 (258)
T ss_pred             EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceee
Confidence            99999999985 7777776543  46899999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      .....   .......|++.|+|||.+...   .++.++|+||||+++|+|++|..||...+..++...... ...+.+|.
T Consensus       153 ~~~~~---~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~  225 (258)
T cd08215         153 LSSTV---DLAKTVVGTPYYLSPELCQNK---PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK-GQYPPIPS  225 (258)
T ss_pred             cccCc---ceecceeeeecccChhHhccC---CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc-CCCCCCCC
Confidence            53321   122334689999999998643   578899999999999999999999988877776666543 34555677


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++.++.+++.+||..||++||++.++++
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         226 QYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            89999999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.7e-34  Score=290.66  Aligned_cols=252  Identities=24%  Similarity=0.421  Sum_probs=196.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--h---HHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--C---AKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~---~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +|+..+.||+|+||.||+|.+..++      ..||+|.+......  .   ....+..+...+..+ +|+|++.+++++.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~------~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   73 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTG------TLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATC   73 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCC------cEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceec
Confidence            4788899999999999999986655      48999998653311  1   112222233444444 7899999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCc
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIP  196 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGla  196 (632)
                      .++..++||||++| +|.+++.+  .+.+++..++.++.||+.||+|||+++++|+||||+||+++.++ .++|+|||++
T Consensus        74 ~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~  151 (268)
T cd06630          74 EDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAA  151 (268)
T ss_pred             cCCeEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccc
Confidence            99999999999995 66666654  34789999999999999999999999999999999999998776 5999999998


Q ss_pred             eeccCCCCCCC-ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhhcc
Q 006772          197 YLLLGRSLSDS-DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV---EEIYHSVVIKKE  272 (632)
Q Consensus       197 k~~~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~---~ei~~~i~~~~~  272 (632)
                      ........... ......||..|+|||.+.+.   .++.++|+|||||++|+|++|..||.....   ......+.....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  228 (268)
T cd06630         152 ARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE---QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT  228 (268)
T ss_pred             cccccccccCCccccccccccceeCHhHhccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC
Confidence            76543211111 11234688999999998643   578899999999999999999999975442   222222222344


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+.+|..+++++.+++.+||..||.+||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            56677789999999999999999999999999886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-34  Score=292.58  Aligned_cols=250  Identities=22%  Similarity=0.335  Sum_probs=195.4

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      |++.+.||+|+||.||+|.+..++      ..+|+|.+....  ......+.++ ..++..+ +|+|++.+++++...  
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~~~~   72 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTG------ELVALKKIRMENEKEGFPITAIRE-IKLLQKL-RHPNIVRLKEIVTSKGK   72 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCC------eEEEEEEEecccccccchHHHHHH-HHHHHhc-cCCCeeeheeeEecCCC
Confidence            678999999999999999987654      489999997643  1222233333 2344444 599999999999887  


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +..++||||+++++.+.+.+. ...+++..++.++.||+.||+|||+++++|+||||+|||+++++.++|+|||++....
T Consensus        73 ~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~  151 (287)
T cd07840          73 GSIYMVFEYMDHDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYT  151 (287)
T ss_pred             CcEEEEeccccccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence            899999999999888877653 2579999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP------  274 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p------  274 (632)
                      ....  .......++..|+|||.+.+.  ..++.++|+||||+++|||++|+.||...+.......+......+      
T Consensus       152 ~~~~--~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         152 KRNS--ADYTNRVITLWYRPPELLLGA--TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             CCCc--ccccccccccccCCceeeEcc--ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            3211  112334568899999987643  247889999999999999999999998877655444333211100      


Q ss_pred             -----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 -----------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 -----------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                             .+...+++++.+++.+||..||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                                   001123889999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=2.3e-34  Score=305.14  Aligned_cols=253  Identities=19%  Similarity=0.260  Sum_probs=195.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..+|+|.+....  ......+. .+..++.++.+|+||+.+++++...
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~vK~~~~~~~~~~~~~~~~-~E~~~l~~l~~h~ni~~~~~~~~~~   79 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTK------EVVALKKIFDAFRNATDAQRTF-REIMFLQELGDHPNIVKLLNVIKAE   79 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCC------eEEEEEeeccccCcchhhhhhh-HHHHHHHHhcCCCCccceeeeeccC
Confidence            67999999999999999999987654      489999885421  12222233 3345566666899999999987653


Q ss_pred             --CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          121 --GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       121 --~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                        ...|+||||+.++|.+.+..   +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        80 ~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          80 NDKDIYLVFEYMETDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             CCceEEEEecccccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence              46899999999988887754   2788999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCC--CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC---
Q 006772          199 LLGRSLS--DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK---  273 (632)
Q Consensus       199 ~~~~~~~--~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~---  273 (632)
                      .......  ........||..|+|||++.+.  ..++.++|+|||||++|+|++|+.||.+.+..+....+......   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  234 (337)
T cd07852         157 LSELEENPENPVLTDYVATRWYRAPEILLGS--TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA  234 (337)
T ss_pred             cccccccccCcchhcccccccccCceeeecc--ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            5332211  1122334689999999987642  35788999999999999999999999876654433332211100   


Q ss_pred             --------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 --------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 --------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                ......++.++.++|.+||+.||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence                                      0111337889999999999999999999999886

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=325.34  Aligned_cols=257  Identities=17%  Similarity=0.219  Sum_probs=182.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCccc---------cc----EEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDE---------YH----ELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS  109 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~---------~~----~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~  109 (632)
                      ++|+++++||+|+||+||+|.++...+....         ..    .++.|.+..  .......+..+..++..+ +|+|
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~Ei~il~~l-~Hpn  224 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA--GSRAAIQLENEILALGRL-NHEN  224 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc--chHHHHHHHHHHHHHHhC-CCCC
Confidence            6799999999999999999987543321000         00    011111111  111122223333444544 7999


Q ss_pred             eeEeeEEEEECCEEEEEEecCCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          110 VCWLHGISVINGKICIAMKFYEGSVGDRIAQQR---GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       110 I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~---~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      |+.+++++...+..|++|+++.+++.+++....   .....+..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            999999999999999999999999988875432   12345677889999999999999999999999999999999999


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC-CCCC--CH-HH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGK--SV-EE  262 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P-F~~~--~~-~e  262 (632)
                      .+||+|||+++.+....  ........||..|+|||++.+   ..++.++|||||||++|||++|..+ |...  .. .+
T Consensus       305 ~vkL~DFGla~~~~~~~--~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~  379 (501)
T PHA03210        305 KIVLGDFGTAMPFEKER--EAFDYGWVGTVATNSPEILAG---DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ  379 (501)
T ss_pred             CEEEEeCCCceecCccc--ccccccccCCcCCCCchhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence            99999999998653321  111234579999999999974   3688999999999999999998754 4322  12 22


Q ss_pred             HHHHHHhhc--------------------cCC----CC-----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          263 IYHSVVIKK--------------------EKP----CI-----PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       263 i~~~i~~~~--------------------~~p----~~-----p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +...+....                    ...    .+     ...++.++.++|.+||+.||.+||++.|++.
T Consensus       380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence            221111000                    000    00     0235678889999999999999999999986

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=3e-34  Score=297.88  Aligned_cols=254  Identities=18%  Similarity=0.227  Sum_probs=194.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|++.+.||+|+||.||+|.++.++      ..||+|.++.... .........+..++..+ +|+|++.+++++...
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~   78 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTG------ELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDK   78 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCC------cEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCc
Confidence            478999999999999999999987654      4899999865321 11111122223344444 689999999887654


Q ss_pred             C----------EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          121 G----------KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       121 ~----------~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      .          .+|++|||++|++.+.+... ...+++..++.++.|++.||+|||+.+|+||||||+||++++++.+||
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          79 QDALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             chhhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEe
Confidence            4          79999999999888877643 347899999999999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||++........  .......++..|+|||.+.+.  ..++.++|+|||||++|||++|+.||...+..+....+...
T Consensus       158 ~dfg~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~  233 (302)
T cd07864         158 ADFGLARLYNSEES--RPYTNKVITLWYRPPELLLGE--ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL  233 (302)
T ss_pred             CcccccccccCCcc--cccccceeccCccChHHhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            99999876533211  111223467889999988632  24678999999999999999999999876654433333221


Q ss_pred             ccCC----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEKP----------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~p----------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+                            .....+|..+.+++.+||+.||.+||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1110                            011246899999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-33  Score=291.99  Aligned_cols=248  Identities=26%  Similarity=0.364  Sum_probs=192.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      ++|+..++||.|+||.||+|.+..++      +.+|+|.+...... ....+.++ .+++..+ +|+||+.+++++..  
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~iv~~~~~~~~~~   72 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTG------MIFALKTITTDPNPDLQKQILRE-LEINKSC-KSPYIVKYYGAFLDES   72 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCC------eEEEEEEEecCCchHHHHHHHHH-HHHHHhC-CCCCeeeeeeEEEccC
Confidence            47999999999999999999987654      48999998754332 23334443 3455554 69999999998765  


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+.+|+||||++ |+|.+++...  ....+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++
T Consensus        73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~  152 (287)
T cd06621          73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVS  152 (287)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccc
Confidence            347899999998 5777766542  2456899999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhhc
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-----SVEEIYHSVVIKK  271 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-----~~~ei~~~i~~~~  271 (632)
                      ......     ......++..|+|||.+.+   ..++.++|+|||||++|+|++|..||...     ...+....+.. .
T Consensus       153 ~~~~~~-----~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~  223 (287)
T cd06621         153 GELVNS-----LAGTFTGTSFYMAPERIQG---KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-M  223 (287)
T ss_pred             cccccc-----ccccccCCccccCHHHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-C
Confidence            654321     1123457889999999864   36788999999999999999999999865     22333333322 1


Q ss_pred             cCCCCC------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIP------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+..+      ..+++++.++|.+||+.||.+||++.|++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         224 PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            222222      234678999999999999999999999887

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.9e-34  Score=298.58  Aligned_cols=255  Identities=23%  Similarity=0.341  Sum_probs=193.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.++||+|+||.||+|.+..++      ..||||.+......  ......++ .+++..+ +|+||+.+++++..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~   78 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTG------RVVALKKILMHNEKDGFPITALRE-IKILKKL-KHPNVVPLIDMAVE   78 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCC------cEEEEEEEEeccCCCCcchhHHHH-HHHHHhc-CCCCccchhhheec
Confidence            479999999999999999999987655      47999998643221  11222233 3444554 68999999887643


Q ss_pred             C--------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          120 N--------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       120 ~--------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      .        ..++++|||+.+++.+.+... ...+++..++.++.|++.||+|||+++|+||||||+|||+++++.++|+
T Consensus        79 ~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~  157 (311)
T cd07866          79 RPDKSKRKRGSVYMVTPYMDHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIA  157 (311)
T ss_pred             ccccccccCceEEEEEecCCcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEC
Confidence            2        357999999999888877543 3579999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCC--------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHH
Q 006772          192 DFGIPYLLLGRSLSD--------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI  263 (632)
Q Consensus       192 DFGlak~~~~~~~~~--------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei  263 (632)
                      |||++..........        .......|++.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+....
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~  235 (311)
T cd07866         158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE--RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ  235 (311)
T ss_pred             cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC--CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999987653321111        112234678899999987642  3478899999999999999999999998776554


Q ss_pred             HHHHHhhccCC---------------------CCC-------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          264 YHSVVIKKEKP---------------------CIP-------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       264 ~~~i~~~~~~p---------------------~~p-------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+......+                     ..+       ..+++++.++|.+||+.||.+||++.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            44433211100                     000       234568899999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=9.3e-34  Score=292.60  Aligned_cols=248  Identities=24%  Similarity=0.409  Sum_probs=199.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|+....||+|+||.||+|.+..++      ..|++|++..... ....+..+. +.+..+ +|+|++.+++.+..++.
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~-~~~~~~~e~-~~l~~l-~~~~i~~~~~~~~~~~~   89 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATG------KEVAIKKMRLRKQ-NKELIINEI-LIMKDC-KHPNIVDYYDSYLVGDE   89 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCC------cEEEEEEEecCch-hHHHHHHHH-HHHHHC-CCCCeeEEEEEEEECCE
Confidence            56899999999999999999987544      4899999975443 223333333 344444 68999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|++|||++ ++|.+++.... ..+++..++.++.|++.||+|||+.+|+|+||||+||+++.++.++|+|||++.....
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  168 (286)
T cd06614          90 LWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK  168 (286)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence            999999999 68888776543 4799999999999999999999999999999999999999999999999998765432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC--CCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI--PSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~--p~~  279 (632)
                      ..   .......++..|++||++.+   ..++.++|+||||+++|+|++|..||...+.......+.... .+..  +..
T Consensus       169 ~~---~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~  241 (286)
T cd06614         169 EK---SKRNSVVGTPYWMAPEVIKR---KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG-IPPLKNPEK  241 (286)
T ss_pred             ch---hhhccccCCcccCCHhHhcC---CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCcchhh
Confidence            11   11223457889999999864   357889999999999999999999999877665554443322 2222  234


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++.++|.+||+.+|.+||++.+++.
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         242 WSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            8899999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=8.8e-34  Score=293.77  Aligned_cols=247  Identities=22%  Similarity=0.369  Sum_probs=196.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|...+.||+|+||.||+|.+..++      +.+++|.+..........+.++. .++.. .+|+|++.+++.+..++.
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~e~-~~l~~-~~h~~vv~~~~~~~~~~~   90 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTG------RQVAVKKMDLRKQQRRELLFNEV-VIMRD-YQHPNIVEMYSSYLVGDE   90 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCC------CEEEEEEEeccchhHHHHHHHHH-HHHHH-cCCCChheEEEEEEcCCe
Confidence            45666789999999999999987654      48999998654433333333333 33344 478999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|++|||+.| +|.+.+..   .++++..+..++.|++.||+|||+++|+||||||+||+++.++.++|+|||++.....
T Consensus        91 ~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648          91 LWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             EEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence            9999999985 66666644   4789999999999999999999999999999999999999999999999998765422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC--CCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI--PSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~--p~~  279 (632)
                      .   ........|+..|+|||.+.+   ..++.++|+|||||++|||++|..||...+..+....+... ..+..  +..
T Consensus       168 ~---~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  240 (285)
T cd06648         168 E---VPRRKSLVGTPYWMAPEVISR---LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKLKNLHK  240 (285)
T ss_pred             C---CcccccccCCccccCHHHhcC---CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCCccccc
Confidence            1   111223468999999999864   35788999999999999999999999887776665554422 22222  334


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++..+.++|.+||+.||++||++.++++
T Consensus       241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         241 VSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            7899999999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=9.6e-34  Score=300.03  Aligned_cols=255  Identities=21%  Similarity=0.296  Sum_probs=194.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      +|++.+.||+|+||.||+|.+....    ....||||.+.....  ...+.+.+ +..++..+.+|+||+.+++.+... 
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~-E~~~l~~l~~h~~iv~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETS----EEETVAIKKITNVFSKKILAKRALR-ELKLLRHFRGHKNITCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCC----cCceEEEEEeccccccchhHHHHHH-HHHHHHHhcCCCChheeeeeeeecc
Confidence            5899999999999999999987651    124799999864321  11222333 334566667899999998865432 


Q ss_pred             ---CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          121 ---GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       121 ---~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                         ..+|++|||+.++|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence               46889999999998888754  3579999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCC-CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-----
Q 006772          198 LLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-----  271 (632)
Q Consensus       198 ~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-----  271 (632)
                      ........ ........||..|+|||++.+.  ..++.++|+|||||++|+|++|..||.+.+.......+....     
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  231 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIMLSF--QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE  231 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence            65432211 1122345789999999987532  357889999999999999999999998766443333222110     


Q ss_pred             ---------------------cCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 ---------------------EKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ---------------------~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                           ....   ....++.++.+++.+||+.||.+||++.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                 0011   11346789999999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=7.7e-34  Score=302.41  Aligned_cols=252  Identities=19%  Similarity=0.304  Sum_probs=192.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      .+|++.+.||.|+||.||+|.+..++      ..||+|.+..........+.++ ..++..+ +|+||+.+++.+...  
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~------~~v~iK~i~~~~~~~~~~~~~E-i~~l~~l-~h~~i~~~~~~~~~~~~   76 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCD------KRVAVKKIVLTDPQSVKHALRE-IKIIRRL-DHDNIVKVYEVLGPSGS   76 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCC------cEEEEEEEecCCCchHHHHHHH-HHHHHhc-CCCcchhhHhhhccccc
Confidence            68999999999999999999987665      4899999866544333444443 3445555 789999888665433  


Q ss_pred             ------------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCc
Q 006772          121 ------------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQ  187 (632)
Q Consensus       121 ------------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~  187 (632)
                                  ...|++|||+.++|.+.+..   +.+++..++.++.||+.||+|||+++|+||||||+|||++. ++.
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~  153 (342)
T cd07854          77 DLTEDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLV  153 (342)
T ss_pred             ccccccccccccceEEEEeecccccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCce
Confidence                        46899999999988777643   47899999999999999999999999999999999999984 557


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      ++|+|||+++.+..............|+..|+|||.+...  ..++.++|+|||||++|||++|+.||.+.+..+....+
T Consensus       154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~  231 (342)
T cd07854         154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLI  231 (342)
T ss_pred             EEECCcccceecCCccccccccccccccccccCHHHHhCc--cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            8999999987653321111112233578899999987532  24778999999999999999999999877654433332


Q ss_pred             Hhh-----------------------ccCCC-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          268 VIK-----------------------KEKPC-----IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       268 ~~~-----------------------~~~p~-----~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...                       ...+.     ....++.++.++|.+||..||++||++.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            211                       00111     11357789999999999999999999999886

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=5e-34  Score=301.71  Aligned_cols=251  Identities=17%  Similarity=0.221  Sum_probs=186.5

Q ss_pred             eEEccc--CceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEE
Q 006772           49 HRIGRG--PFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICI  125 (632)
Q Consensus        49 ~~IG~G--~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~L  125 (632)
                      ..||+|  +||+||+|.+..++      +.||+|++..... ....+.+.++..+ .+..+|+||+.+++++..++..|+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~e~~~-~~~l~h~niv~~~~~~~~~~~~~~   76 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTG------TLVTVRITDLENCTEEHLKALQNEVVL-SHFFRHPNIMTSWTVFTTGSWLWV   76 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCC------cEEEEEEeccccCCHHHHHHHHHHHHH-HHhCCCCCcceEeeeEecCCceEE
Confidence            456666  99999999987665      4899999865332 2222233333333 334579999999999999999999


Q ss_pred             EEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCC
Q 006772          126 AMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       126 VmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~  204 (632)
                      +|||+. |++.+++.+.....+++..+..++.|++.||+|||+++|+||||||+|||++.++.++++||+.+........
T Consensus        77 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          77 ISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             EEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence            999998 5788777665445689999999999999999999999999999999999999999999999986533211110


Q ss_pred             CCC----ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc--------
Q 006772          205 SDS----DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE--------  272 (632)
Q Consensus       205 ~~~----~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~--------  272 (632)
                      ...    ......++..|||||++.+. ...++.++|+|||||++|||++|..||.+....+..........        
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (328)
T cd08226         157 KAKVVYDFPQFSTSVLPWLSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITT  235 (328)
T ss_pred             cccccccccccccCccCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccc
Confidence            000    01112356779999998753 23578899999999999999999999987664443322211000        


Q ss_pred             -------------------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 -------------------------------------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 -------------------------------------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                           ....+..+++++.+||++||+.||++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                                                 00112345678999999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.4e-35  Score=314.38  Aligned_cols=269  Identities=21%  Similarity=0.282  Sum_probs=210.5

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+|.+-|..++.||-|+||+|-|+....+.      ..||+|.|.+...-  .....+..++.|+... +.+-|++|+..
T Consensus       625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~------~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyyS  697 (1034)
T KOG0608|consen  625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTR------ALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYS  697 (1034)
T ss_pred             hccccceEEEeeecccccceeEEEeecchh------hHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEE
Confidence            477888999999999999999999876654      58999999764321  1112233444555544 56779999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      |++++.+|+||+|++ |++-.++.+.  +-|++..+++|++++..|+++.|..|+|||||||+|||||.+|++||+||||
T Consensus       698 FQDkdnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGL  775 (1034)
T KOG0608|consen  698 FQDKDNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL  775 (1034)
T ss_pred             eccCCceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccc
Confidence            999999999999999 5777777664  6899999999999999999999999999999999999999999999999999


Q ss_pred             ceecc---------CC------CCCC------------------------CccccccCCCccCCccccCCCCCCCCCccc
Q 006772          196 PYLLL---------GR------SLSD------------------------SDMALRLGTPNYMAPEQWEPEVRGPISFET  236 (632)
Q Consensus       196 ak~~~---------~~------~~~~------------------------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ks  236 (632)
                      +.-+-         ..      +...                        ......+||++|+|||++.   +..|+..+
T Consensus       776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~---r~g~~q~c  852 (1034)
T KOG0608|consen  776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA---RTGYTQLC  852 (1034)
T ss_pred             cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc---ccCccccc
Confidence            75331         00      0000                        0011247999999999997   44789999


Q ss_pred             ccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHHHHHHHHh
Q 006772          237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPL---MADILHAFES  311 (632)
Q Consensus       237 DvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs---~~ell~~Le~  311 (632)
                      ||||.||+||||+.|+.||...++.+...+++.-.....++  ..++.++.++|.+++. +++.|..   .++|..    
T Consensus       853 dwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKa----  927 (1034)
T KOG0608|consen  853 DWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKA----  927 (1034)
T ss_pred             hhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhhhc----
Confidence            99999999999999999999988877666655443333444  6899999999988765 7888873   333433    


Q ss_pred             hhhcccCCCCccccc
Q 006772          312 SQNAVYNDGEWTGLG  326 (632)
Q Consensus       312 ~~~~~~~~~~w~~~~  326 (632)
                        +.||.++||..+.
T Consensus       928 --HpfFkgIDfsslR  940 (1034)
T KOG0608|consen  928 --HPFFKGIDFSSLR  940 (1034)
T ss_pred             --CccccccchHhhh
Confidence              7899999998754

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=6.7e-34  Score=296.05  Aligned_cols=247  Identities=20%  Similarity=0.341  Sum_probs=195.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||++.+..++      +.||+|.+........+.+.++. .++..+ +|+|++.+++.+..++.
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e~-~~l~~l-~hp~i~~~~~~~~~~~~   90 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATG------QEVAIKQMNLQQQPKKELIINEI-LVMREN-KHPNIVNYLDSYLVGDE   90 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCC------CEEEEEEeccccchHHHHHHHHH-HHHhhc-CCCCeeehhheeeeCCc
Confidence            68999999999999999999876544      47999998643333333333333 344444 68999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++ |+|.+++..   ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          91 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             EEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence            999999998 566666643   3688999999999999999999999999999999999999999999999998865432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~~  279 (632)
                      ..   .......|++.|+|||.+..   +.++.++|+|||||++|+|++|..||...+..+....+.. ...+.  .+..
T Consensus       168 ~~---~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~  240 (293)
T cd06647         168 EQ---SKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQNPEK  240 (293)
T ss_pred             cc---cccccccCChhhcCchhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCCCCCccc
Confidence            21   11223468899999999863   3578899999999999999999999987765443322221 12222  2346


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++..+.++|++||..+|++||++.+++.
T Consensus       241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         241 LSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            7889999999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-33  Score=281.04  Aligned_cols=247  Identities=27%  Similarity=0.498  Sum_probs=201.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||+|.+...+      +.|++|.+.....  .....+.++ .+++.++ .|++++.+.+++..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e-~~~l~~l-~~~~i~~~~~~~~~~~   72 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETG------DFVAIKQISLEKIKEEALKSIMQE-IDLLKNL-KHPNIVKYIGSIETSD   72 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCC------cEEEEEEecccccCHHHHHHHHHH-HHHHHhC-CCCCccEEEEEEEeCC
Confidence            5889999999999999999987554      4899999976543  222333333 3444454 6899999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..+++|||++| +|.+.+...  ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||++....
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  150 (254)
T cd06627          73 SLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLN  150 (254)
T ss_pred             EEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecC
Confidence            99999999985 777776543  579999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ...   .......++..|+|||.+...   .++.++|+||||+++|+|++|..||...+......... ....+.++..+
T Consensus       151 ~~~---~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~  223 (254)
T cd06627         151 DVS---KDDASVVGTPYWMAPEVIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGI  223 (254)
T ss_pred             CCc---ccccccccchhhcCHhhhcCC---CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCC
Confidence            321   112334688999999998643   47889999999999999999999998776555444443 34555677889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+.+++.+||..+|++||++.+++.
T Consensus       224 ~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         224 SPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            999999999999999999999999885

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=4.1e-34  Score=303.12  Aligned_cols=253  Identities=23%  Similarity=0.309  Sum_probs=194.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|.+.....  .....+.+ +..++..+ +|+||+.+++++.. 
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~------~~valK~~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~iv~~~~~~~~~   76 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSG------KKVAIKKIPHAFDVPTLAKRTLR-ELKILRHF-KHDNIIAIRDILRPP   76 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCC------CEEEEEEeccccccccchHHHHH-HHHHHHhc-CCCCccCHHHhcccc
Confidence            68999999999999999999988665      4899999875322  12222333 33445555 59999998887653 


Q ss_pred             ---CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 ---NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 ---~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                         ...+|+||||+.|++.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||+++++.+||+|||++
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~  154 (334)
T cd07855          77 GADFKDVYVVMDLMESDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMA  154 (334)
T ss_pred             CCCCceEEEEEehhhhhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccc
Confidence               357899999999988877743  356999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCC-CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-----
Q 006772          197 YLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK-----  270 (632)
Q Consensus       197 k~~~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~-----  270 (632)
                      +......... .......|+..|+|||.+...  ..++.++|+|||||++|||++|+.||.+.+.......+...     
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~  232 (334)
T cd07855         155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSL--PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS  232 (334)
T ss_pred             eeecccCcCCCcccccccccccccChHHhcCC--cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence            7653322211 111234789999999997632  35788999999999999999999999877644322221110     


Q ss_pred             -------------------ccCCCC-----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 -------------------KEKPCI-----PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 -------------------~~~p~~-----p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                         ......     ....++++.++|.+||+.||++||++.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                               001111     1346899999999999999999999999886

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=5.2e-34  Score=302.94  Aligned_cols=250  Identities=22%  Similarity=0.261  Sum_probs=193.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||.+....  ........+ +..++..+ +|+||+.+++++...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~ni~~~~~~~~~~   76 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETN------EKVAIKKIANAFDNRIDAKRTLR-EIKLLRHL-DHENVIAIKDIMPPP   76 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCC------CeEEEEEecccccccchhHHHHH-HHHHHHhc-CCCCccchHHheecc
Confidence            57999999999999999999987655      489999986532  112222323 33444444 689999998877643


Q ss_pred             -----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          121 -----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       121 -----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                           ..+|++|||+.++|.+.+..  .+.+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+
T Consensus        77 ~~~~~~~~~lv~e~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~  154 (337)
T cd07858          77 HREAFNDVYIVYELMDTDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGL  154 (337)
T ss_pred             cccccCcEEEEEeCCCCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCcc
Confidence                 35899999999998888754  35799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc----
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK----  271 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~----  271 (632)
                      ++......   .......++..|+|||.+...  ..++.++|+|||||++|+|++|..||.+.+.......+....    
T Consensus       155 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  229 (337)
T cd07858         155 ARTTSEKG---DFMTEYVVTRWYRAPELLLNC--SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPS  229 (337)
T ss_pred             ccccCCCc---ccccccccccCccChHHHhcC--CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            87653221   122334678999999988632  247889999999999999999999998765433222211100    


Q ss_pred             ----------------------cCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 ----------------------EKP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ----------------------~~p---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                            ..+   .....+++++.++|.+||+.||++||++.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~  290 (337)
T cd07858         230 EEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA  290 (337)
T ss_pred             hHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence                                  000   012467899999999999999999999999986

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-34  Score=291.80  Aligned_cols=249  Identities=23%  Similarity=0.315  Sum_probs=195.7

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      |++.+.||+|++|.||+|.+..++      ..+++|.+......  ....+.. +..++..+ +|++|+.+++++..++.
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~-e~~~l~~l-~~~~i~~~~~~~~~~~~   72 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTG------EIVAIKKIKLRFESEGIPKTALR-EIKLLKEL-NHPNIIKLLDVFRHKGD   72 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCC------cEEEEEEeccccccchhHHHHHH-HHHHHHHh-cCCCcchHHHhhccCCC
Confidence            567889999999999999986554      48999998654322  1222223 33444555 58999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      .+++|||+++++.+.+... ...+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......
T Consensus        73 ~~~v~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          73 LYLVFEFMDTDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             EEEEEeccCCCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            9999999999988877654 358999999999999999999999999999999999999999999999999998765432


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--------  274 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--------  274 (632)
                      .   .......++..|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+.+..+....+......+        
T Consensus       152 ~---~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd05118         152 V---RPYTHYVVTRWYRAPELLLGD--KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF  226 (283)
T ss_pred             c---ccccCccCcccccCcHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence            2   112234578899999998642  257889999999999999999999998877544433332111110        


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          ...+.++.++.++|.+||+.||.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                                011346789999999999999999999999886

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.2e-33  Score=284.91  Aligned_cols=247  Identities=26%  Similarity=0.453  Sum_probs=200.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +|++.+.||+|+||.||++.+..++      ..+|+|.+.....  .....+.. +..++..+ .|+||+.+.+++..+.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~-e~~~l~~l-~~~~i~~~~~~~~~~~   72 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDN------QFYALKEVDLGSMSQKEREDAVN-EIRILASV-NHPNIISYKEAFLDGN   72 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCC------CEEEEEEEehhhccHHHHHHHHH-HHHHHHhC-CCCCchhhhhhhccCC
Confidence            5899999999999999999887655      4799999865322  22222223 23444555 5899999999999899


Q ss_pred             EEEEEEecCCC-CHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEG-SVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..|+||||++| +|.+.+.+..  +..+++..++.++.|++.||+|||+++++|+||+|.||+++.++.+||+|||+++.
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~  152 (256)
T cd08530          73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKV  152 (256)
T ss_pred             EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhh
Confidence            99999999985 6777665532  35789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      ....     ......|++.|++||.+.+   ..++.++|+||||+++|||++|..||...+..+....+. ....+..+.
T Consensus       153 ~~~~-----~~~~~~~~~~~~~Pe~~~~---~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~  223 (256)
T cd08530         153 LKKN-----MAKTQIGTPHYMAPEVWKG---RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ-RGKYPPIPP  223 (256)
T ss_pred             hccC-----CcccccCCccccCHHHHCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCCch
Confidence            5432     1123457899999999874   357889999999999999999999999888776655544 334445667


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++.++.+++.+||+.+|++||++.+++.
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         224 IYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            88999999999999999999999999886

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-34  Score=324.10  Aligned_cols=274  Identities=22%  Similarity=0.385  Sum_probs=224.5

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      |......|+.+++.+.+.||+|.||.|++|........ ......||||+++..........+..+..++..+.+|+|++
T Consensus       286 ~~~~~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv  365 (609)
T KOG0200|consen  286 PEDPKWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIV  365 (609)
T ss_pred             CcCCceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchh
Confidence            34446678889999999999999999999986543321 12246899999987655544555555667788889999999


Q ss_pred             EeeEEEEECCEEEEEEecCC-CCHHHHHHHhc------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeee
Q 006772          112 WLHGISVINGKICIAMKFYE-GSVGDRIAQQR------------G--GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK  176 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~------------~--~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLK  176 (632)
                      .+.+++...+.+++|+||+. |+|++++.+.+            .  ..++..+.+.++.|||.|++||+++.+|||||.
T Consensus       366 ~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLA  445 (609)
T KOG0200|consen  366 NLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLA  445 (609)
T ss_pred             hheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhh
Confidence            99999999999999999998 89999987764            0  138899999999999999999999999999999


Q ss_pred             CCeEEEecCCcEEEEecCCceeccCCCCCCCccccccC--CCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCC
Q 006772          177 PSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG--TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQ  253 (632)
Q Consensus       177 P~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~G--T~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~  253 (632)
                      .+|||+.++..+||+|||+|+..........  ..-.|  ...|||||.+..   ..|+.+|||||||++||||+| |..
T Consensus       446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~---~~ft~kSDVWSfGI~L~EifsLG~~  520 (609)
T KOG0200|consen  446 ARNVLITKNKVIKIADFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFD---RVFTSKSDVWSFGILLWEIFTLGGT  520 (609)
T ss_pred             hhhEEecCCCEEEEccccceeccCCCCceEe--cCCCCccceeecCHHHhcc---CcccccchhhHHHHHHHHHhhCCCC
Confidence            9999999999999999999985433211110  00111  346999999974   368999999999999999999 999


Q ss_pred             CCCCCC-HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          254 PWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       254 PF~~~~-~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ||.+.. ..+++. .+..+.+...|..|++++.++|+.||+.+|++||++.++.+.|+..
T Consensus       521 PYp~~~~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  521 PYPGIPPTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             CCCCCCcHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            999966 556655 4456778888999999999999999999999999999999988874

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.2e-33  Score=299.08  Aligned_cols=253  Identities=17%  Similarity=0.238  Sum_probs=195.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH--------------HHHHHHHHHHhhhccCCC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA--------------KVFVNKFEELFPKFRESQ  108 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~--------------~~~~~~~~~il~~l~~h~  108 (632)
                      +.+.+.+.||+|+||.||+|.+..++      +.||||.+........              ..+. ++..++..+ +|+
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~l~~l-~h~   80 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTG------KIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTL-RELKIMNEI-KHE   80 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCC------CeEEEEEeeccccccccccchhhhcccccchhHH-HHHHHHHhC-CCc
Confidence            33346678999999999999987654      4899999865322110              0122 223344444 689


Q ss_pred             ceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       109 ~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                      ||+.+++++..++..|++|||+.|++.+.+..  ...+++..+..++.|++.||+|||+++|+|+||||+|||++.++.+
T Consensus        81 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~  158 (335)
T PTZ00024         81 NIMGLVDVYVEGDFINLVMDIMASDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGIC  158 (335)
T ss_pred             ceeeeeEEEecCCcEEEEEeccccCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCE
Confidence            99999999999999999999999999988854  3478999999999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCC-----------CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC
Q 006772          189 VLGDFGIPYLLLGRSL-----------SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG  257 (632)
Q Consensus       189 kL~DFGlak~~~~~~~-----------~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~  257 (632)
                      +|+|||++........           .........+++.|+|||.+.+.  ..++.++|+|||||++|||++|..||.+
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA--EKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             EECCccceeecccccccccccccccccccccccccccccCCCCChhcccC--CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999876541111           01112233568899999998643  2468899999999999999999999998


Q ss_pred             CCHHHHHHHHHhhccCCC--------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          258 KSVEEIYHSVVIKKEKPC--------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       258 ~~~~ei~~~i~~~~~~p~--------------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+..+.+..+......+.                          ....++.++.++|.+||+.||++||++++++.
T Consensus       237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            876655544432111110                          01345788999999999999999999999886

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=5.5e-33  Score=278.72  Aligned_cols=250  Identities=26%  Similarity=0.445  Sum_probs=199.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      +|++.+.||+|+||.||+|.+..++      +.|++|++.....  .....+ .++...+.++ +|++|+.+.+.+... 
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~-~~e~~~l~~l-~~~~i~~~~~~~~~~~   72 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTG------ELMAVKSVELSGDSEEELEAL-EREIRILSSL-QHPNIVRYYGSERDEE   72 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCC------cEEEEEEeeccccchHHHHHH-HHHHHHHHHc-CCCCEeeEEEEEecCC
Confidence            4888999999999999999987654      4899999865442  222233 3333444554 599999999999888 


Q ss_pred             -CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          121 -GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       121 -~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                       +..+++|||++ ++|.+++...  ..+++..++.++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||.+..
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~  150 (260)
T cd06606          73 KNTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKR  150 (260)
T ss_pred             CCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence             89999999996 5777776543  3899999999999999999999999999999999999999999999999999877


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~~~~~p~~p  277 (632)
                      ....... .......++..|+|||.+...   .++.++|+||||+++|+|++|..||...+ .......+......+.+|
T Consensus       151 ~~~~~~~-~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T cd06606         151 LGDIETG-EGTGSVRGTPYWMAPEVIRGE---EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIP  226 (260)
T ss_pred             ccccccc-ccccCCCCCccccCHhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCC
Confidence            6433210 012334678999999998643   47889999999999999999999998765 333333333334556678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..++.++.++|.+||+.||.+||++.+++.
T Consensus       227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            889999999999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.2e-34  Score=312.16  Aligned_cols=247  Identities=20%  Similarity=0.312  Sum_probs=210.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH--HHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA--KVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ..|.+.+.||+|.|++|.+|++..++      ..||||.+.+...+..  +. +.++..++. ...||||++++.+....
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~------~~VaiK~idkt~ln~~~~~k-~~rev~imk-~l~HPnIvkl~~v~~t~  127 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTG------TEVAIKIIDKTQLNPSKRQK-LGREVDIMK-SLNHPNIVKLFSVIETE  127 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCC------ceEEEEEehhcccChHHHHH-HHHHHHHHH-hcCCcceeeeeeeeeec
Confidence            57999999999999999999998765      5899999987543322  23 233333433 45899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ..+|+||||+. |.+.+++..+  +++.+.++..++.|+..|++|||+++|+|||||++||||+.+.++||+|||++..+
T Consensus       128 ~~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~  205 (596)
T KOG0586|consen  128 ATLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFF  205 (596)
T ss_pred             ceeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceee
Confidence            99999999997 6888888654  57888999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ...    ....++||++.|.|||++.+..  ...+.+|+||+|++||-|+.|..||.+.+..+....++.  .+..+|..
T Consensus       206 ~~~----~~lqt~cgsppyAaPEl~~g~~--y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~--gk~rIp~~  277 (596)
T KOG0586|consen  206 DYG----LMLQTFCGSPPYAAPELFNGKK--YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR--GKYRIPFY  277 (596)
T ss_pred             ccc----ccccccCCCCCccChHhhcCcc--cCCcceehhhhhhhheeeeecccccCCcccccccchhee--eeecccce
Confidence            532    2345689999999999998763  346899999999999999999999999888777666653  44556788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.+++++|+++|..+|.+|++++++++
T Consensus       278 ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  278 MSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             eechhHHHHHHhhccCccccCCHHHhhh
Confidence            9999999999999999999999999886

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=5.2e-33  Score=321.80  Aligned_cols=147  Identities=22%  Similarity=0.329  Sum_probs=121.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.++||.|+||.||+|.+..++      +.||||+++....  ......+..+..++. ...|++|+.++..+..
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~------~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~-~l~hp~Iv~~~~~~~~   75 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNS------KLYAVKVVKKADMINKNMVHQVQAERDALA-LSKSPFIVHLYYSLQS   75 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEehhhccCHHHHHHHHHHHHHHH-hcCCCCcCeEEEEEEE
Confidence            478999999999999999999987654      4899999865321  111222333333333 4479999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .+.+||||||+. |+|.+++...  +.+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++
T Consensus        76 ~~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          76 ANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999997 5777777543  478999999999999999999999999999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.7e-33  Score=298.24  Aligned_cols=246  Identities=22%  Similarity=0.303  Sum_probs=189.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDC-AKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|.+.+.||+|+||.||+|.+..++      ..||||.+.... ... ...+.+ +..++..+ .|+||+.+.+++..
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-e~~~l~~l-~h~niv~~~~~~~~   85 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTG------EKVAIKKLSRPFQSEIFAKRAYR-ELTLLKHM-QHENVIGLLDVFTS   85 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCC------cEEEEEEecCccccccchhHHHH-HHHHHHhc-CCCCccchhheecc
Confidence            368999999999999999999987554      489999986532 111 122223 33444444 79999999988765


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .      ...|+||||+.+++.+..    +..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~df  161 (342)
T cd07879          86 AVSGDEFQDFYLVMPYMQTDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDF  161 (342)
T ss_pred             cccCCCCceEEEEecccccCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence            4      356999999988765543    246899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-  272 (632)
                      |+++....      ......++..|+|||.+.+.  ..++.++|+|||||++|||++|+.||.+.+....+..+..... 
T Consensus       162 g~~~~~~~------~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~  233 (342)
T cd07879         162 GLARHADA------EMTGYVVTRWYRAPEVILNW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV  233 (342)
T ss_pred             CCCcCCCC------CCCCceeeecccChhhhcCc--cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99875321      12234678899999998642  2478899999999999999999999998775544433321100 


Q ss_pred             --------------------CCCC--------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 --------------------KPCI--------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 --------------------~p~~--------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          .+..        .+..++++.++|.+||+.||++||++.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             CCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                                0111        1246788999999999999999999999886

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-36  Score=303.51  Aligned_cols=247  Identities=23%  Similarity=0.344  Sum_probs=202.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +-|.++.+||+|+||.||+|.|+.++      +.+|||...-.  ...++++.+ ..+++++ ..+++++++|.+..+..
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG------~v~AIK~VPV~--sDLQEIIKE-ISIMQQC-~S~yVVKYYGSYFK~sD  102 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESG------HVLAIKKVPVD--TDLQEIIKE-ISIMQQC-KSKYVVKYYGSYFKHSD  102 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccC------cEEEEEecCcc--chHHHHHHH-HHHHHHc-CCchhhhhhhhhccCCc
Confidence            55888999999999999999998876      48999998543  233444444 3556665 67999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ++||||||. |+..|.+. .+++++++.++..++++.+.||+|||...-||||||..||||+.+|++||+|||.|-.+..
T Consensus       103 LWIVMEYCGAGSiSDI~R-~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD  181 (502)
T KOG0574|consen  103 LWIVMEYCGAGSISDIMR-ARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD  181 (502)
T ss_pred             eEeehhhcCCCcHHHHHH-HhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence            999999998 88888765 4567999999999999999999999999999999999999999999999999998865432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~~  279 (632)
                      ..   ....+.+|||.|||||++..-   .|+.++||||||++..||..|++||..-.+......|- .+.+|.  -|..
T Consensus       182 TM---AKRNTVIGTPFWMAPEVI~EI---GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP-T~PPPTF~KPE~  254 (502)
T KOG0574|consen  182 TM---AKRNTVIGTPFWMAPEVIEEI---GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP-TKPPPTFKKPEE  254 (502)
T ss_pred             hH---HhhCccccCcccccHHHHHHh---ccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc-CCCCCCCCChHh
Confidence            21   112457899999999999743   68899999999999999999999998866544322222 122232  3467


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++.+++++||-++|++|-++.++++
T Consensus       255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  255 WSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             hhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            8999999999999999999999988775

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=3.6e-33  Score=292.05  Aligned_cols=250  Identities=15%  Similarity=0.183  Sum_probs=182.4

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC--chhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEE
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKIC  124 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~--~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~  124 (632)
                      +++.+|.  +|.||.+++..++      +.||||++...  .......+ ..+...+..+ .|+||+.+++++..++..|
T Consensus         6 i~~~~~~--~~~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~-~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~   75 (314)
T cd08216           6 IGKCFED--LMIVHLAKHKPTN------TLVAVKKINLDSCSKEDLKLL-QQEIITSRQL-QHPNILPYVTSFIVDSELY   75 (314)
T ss_pred             hhHhhcC--CceEEEEEecCCC------CEEEEEEEeccccchhHHHHH-HHHHHHHHhc-CCcchhhhhheeecCCeEE
Confidence            3344444  4555555555443      58999998754  22222333 3333444554 6899999999999999999


Q ss_pred             EEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          125 IAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       125 LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      ++|||++ |++.+++.......+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||.+..+....
T Consensus        76 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~  155 (314)
T cd08216          76 VVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG  155 (314)
T ss_pred             EEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccc
Confidence            9999998 677777766555678999999999999999999999999999999999999999999999999887653322


Q ss_pred             CC----CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-------
Q 006772          204 LS----DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-------  272 (632)
Q Consensus       204 ~~----~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-------  272 (632)
                      ..    ........++..|+|||++... ...++.++|+|||||++|||++|..||...+.............       
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (314)
T cd08216         156 KRQRVVHDFPKSSVKNLPWLSPEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKS  234 (314)
T ss_pred             ccccccccccccccccccccCHHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccC
Confidence            11    1111234578899999998643 23578899999999999999999999987654433221111000       


Q ss_pred             -------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 -------------------------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 -------------------------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                               ....+..++.++.+++.+||..||++||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence                                     00011123467899999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.7e-33  Score=295.50  Aligned_cols=248  Identities=23%  Similarity=0.300  Sum_probs=192.4

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-h-hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-D-CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||.+..... . ....+.+ +..++..+ +|+||+.+.+++.
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~~   84 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTG------AKVAIKKLYRPFQSELFAKRAYR-ELRLLKHM-KHENVIGLLDVFT   84 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCC------cEEEEEEecccccchHHHHHHHH-HHHHHHhc-CCCCccceeeeec
Confidence            3578999999999999999999987655      4899999864321 1 1122333 33444444 7899999999887


Q ss_pred             ECC------EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          119 ING------KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       119 ~~~------~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      .+.      ..++||||+.+++.+++..   ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.++|+|
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~d  161 (343)
T cd07880          85 PDLSLDRFHDFYLVMPFMGTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILD  161 (343)
T ss_pred             CCccccccceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEee
Confidence            653      4689999998787776643   4799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||++.....      ......+++.|+|||.+.+.  ..++.++|+|||||++|+|++|..||.+.+....+..+.....
T Consensus       162 fg~~~~~~~------~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~  233 (343)
T cd07880         162 FGLARQTDS------EMTGYVVTRWYRAPEVILNW--MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG  233 (343)
T ss_pred             ccccccccc------CccccccCCcccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            999875422      12234678999999998642  2478899999999999999999999987765443333221100


Q ss_pred             C-----------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 K-----------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~-----------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .                             ......+++++.++|.+||+.||++||++.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0                             0112467888999999999999999999999885

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=5.7e-33  Score=289.39  Aligned_cols=245  Identities=23%  Similarity=0.366  Sum_probs=192.4

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKIC  124 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~  124 (632)
                      |....+||+|+||.||+|.+..++      ..||||.+..........+.++. .++..+ +|+|++.+++.+..++..|
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~iv~~~~~~~~~~~~~   93 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSG------KLVAVKKMDLRKQQRRELLFNEV-VIMRDY-QHENVVEMYNSYLVGDELW   93 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCC------eEEEEEEecccchhHHHHHHHHH-HHHHhc-CCcchhheeeEEEeCCEEE
Confidence            444578999999999999987655      48999988543333333333333 344444 6899999999999999999


Q ss_pred             EEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          125 IAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       125 LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      ++|||++| +|.+.+.   ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus        94 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~  170 (292)
T cd06657          94 VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  170 (292)
T ss_pred             EEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence            99999986 5555432   2468999999999999999999999999999999999999999999999999886543211


Q ss_pred             CCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCCCCC
Q 006772          204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPSGLP  281 (632)
Q Consensus       204 ~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~~lp  281 (632)
                         .......|+..|+|||.+..   ..++.++|+||||+++|+|++|..||.+.+..+....+.. ...+.  ....++
T Consensus       171 ---~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  243 (292)
T cd06657         171 ---PRRKSLVGTPYWMAPELISR---LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPKLKNLHKVS  243 (292)
T ss_pred             ---ccccccccCccccCHHHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-hCCcccCCcccCC
Confidence               11233568999999999863   3578899999999999999999999998776655444332 12222  234678


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.+.+++.+||+.||.+||++.+++.
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            99999999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-34  Score=300.31  Aligned_cols=268  Identities=23%  Similarity=0.357  Sum_probs=214.8

Q ss_pred             cCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhh-ccCCCc
Q 006772           31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-FRESQS  109 (632)
Q Consensus        31 ~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~-l~~h~~  109 (632)
                      +.+.-+++-.+...+++.+.||+|.||.||+|....        +.||||++...   ..+.+.++. .++.. ...|+|
T Consensus       198 ~~~~~sspl~~l~pl~l~eli~~Grfg~V~KaqL~~--------~~VAVKifp~~---~kqs~~~Ek-~Iy~lp~m~h~n  265 (534)
T KOG3653|consen  198 SGPAPSSPLLELDPLQLLELIGRGRFGCVWKAQLDN--------RLVAVKIFPEQ---EKQSFQNEK-NIYSLPGMKHEN  265 (534)
T ss_pred             CCCCCCcccccCCchhhHHHhhcCccceeehhhccC--------ceeEEEecCHH---HHHHHHhHH-HHHhccCccchh
Confidence            445556677778899999999999999999998654        58999998642   334444443 44332 458999


Q ss_pred             eeEeeEEEEECC----EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---------CCceeeee
Q 006772          110 VCWLHGISVING----KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS---------IGLLVLNL  175 (632)
Q Consensus       110 I~~l~~~~~~~~----~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs---------~~IvHRDL  175 (632)
                      |+.+.+.-....    .++||++|.+ |+|.+++..+   .++|.+..+++..+++||+|||+         ..|+||||
T Consensus       266 Il~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDl  342 (534)
T KOG3653|consen  266 ILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDL  342 (534)
T ss_pred             HHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccc
Confidence            999988765544    7899999998 9999999764   79999999999999999999997         25999999


Q ss_pred             eCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCC---CCcccccchhHHHHHHHHhCC
Q 006772          176 KPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP---ISFETDTWGFGCSIMEMLTGI  252 (632)
Q Consensus       176 KP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~---~t~ksDvwSlGvvL~EmltG~  252 (632)
                      |.+||||.+|+++.|+|||+|..+. ......+....+||.+|||||++.+...-+   .-.+.||||+|.+||||++.-
T Consensus       343 kSkNVLvK~DlTccIaDFGLAl~~~-p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC  421 (534)
T KOG3653|consen  343 KSKNVLVKNDLTCCIADFGLALRLE-PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC  421 (534)
T ss_pred             cccceEEccCCcEEeeccceeEEec-CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999998875 344455556689999999999998654322   124689999999999999852


Q ss_pred             ------------CCCC-----CCCHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 006772          253 ------------QPWF-----GKSVEEIYHSVVIKKEKPCIPSGL-----PPAVENVIIGCFEYDLRNRPLMADILHAFE  310 (632)
Q Consensus       253 ------------~PF~-----~~~~~ei~~~i~~~~~~p~~p~~l-----p~~l~~LI~~cL~~DP~~RPs~~ell~~Le  310 (632)
                                  .||.     ..+.+++...++.++.+|.+|+.+     ..-+.+.+..||..||+.|.|+.=+.+.+.
T Consensus       422 ~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~  501 (534)
T KOG3653|consen  422 TDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA  501 (534)
T ss_pred             ccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence                        3443     245667888888889999999654     357899999999999999999988887776


Q ss_pred             hhhh
Q 006772          311 SSQN  314 (632)
Q Consensus       311 ~~~~  314 (632)
                      .+.+
T Consensus       502 ~l~~  505 (534)
T KOG3653|consen  502 ELMM  505 (534)
T ss_pred             HHhc
Confidence            6543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.9e-33  Score=298.18  Aligned_cols=248  Identities=22%  Similarity=0.274  Sum_probs=194.8

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      -.++|++.+.||+|+||.||+|.+..++      ..||||++....  ........+ +..++.++ .|+|++.+.+++.
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~~   84 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTG------RKVAIKKLSRPFQSAIHAKRTYR-ELRLLKHM-DHENVIGLLDVFT   84 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCC------cEEEEEecccccchhhHHHHHHH-HHHHHHhc-cCCCHHHHHHHhh
Confidence            3578999999999999999999987655      489999986432  122223333 33444554 7899998887766


Q ss_pred             ECCE------EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          119 INGK------ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       119 ~~~~------l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      .++.      .++||||+.++|.+++..   ..+++..++.++.|++.||+|||+++|+||||||+||+++.++.++|+|
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~d  161 (343)
T cd07851          85 PASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILD  161 (343)
T ss_pred             ccccccccccEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcc
Confidence            5544      899999999888887754   4799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||++......      .....++..|+|||.+.+.  ..++.++|+|||||++|||++|+.||.+.+..+.+..+.....
T Consensus       162 fg~~~~~~~~------~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~  233 (343)
T cd07851         162 FGLARHTDDE------MTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVG  233 (343)
T ss_pred             cccccccccc------ccCCcccccccCHHHHhCC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Confidence            9998754221      2334678899999998642  2578899999999999999999999988776555444332111


Q ss_pred             CC-----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KP-----------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p-----------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+                             .....+++++.++|.+||..||++||++.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            10                             011246889999999999999999999999886

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-32  Score=294.12  Aligned_cols=250  Identities=22%  Similarity=0.262  Sum_probs=192.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      |...++|++.+.||+|+||.||+|.+..++      ..||+|.+......  ....+.+ +..++.++ +|+||+.+.++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-Ei~~l~~l-~h~~iv~~~~~   84 (345)
T cd07877          13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTG------LRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM-KHENVIGLLDV   84 (345)
T ss_pred             hhccCceEEEEEeeecCCeEEEEEEEcCCC------eEEEEEEecCcchhhHHHHHHHH-HHHHHHHc-CCCcccceeee
Confidence            445588999999999999999999987655      48999998653211  1222333 33444444 78999999988


Q ss_pred             EEEC------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          117 SVIN------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       117 ~~~~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      +...      ...|++++++.+++.+.+..   ..+++..++.++.|++.||+|||+++|+||||||+||++++++.+||
T Consensus        85 ~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl  161 (345)
T cd07877          85 FTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI  161 (345)
T ss_pred             eeecccccccccEEEEehhcccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEE
Confidence            7643      35789999998888776643   36899999999999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||+++....      ......|+..|+|||.+.+.  ..++.++|+|||||++|||++|+.||...+.......+...
T Consensus       162 ~dfg~~~~~~~------~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  233 (345)
T cd07877         162 LDFGLARHTDD------EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL  233 (345)
T ss_pred             ecccccccccc------cccccccCCCccCHHHHhCc--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999875321      12234678999999988642  35788999999999999999999999876654433322211


Q ss_pred             cc---------------------CCCC--------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KE---------------------KPCI--------PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~---------------------~p~~--------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..                     .+..        ....++++.++|.+||+.||.+||++.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             hCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            00                     0011        1245788999999999999999999999886

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.5e-32  Score=291.18  Aligned_cols=247  Identities=22%  Similarity=0.304  Sum_probs=190.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-h-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-E-DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||.+.+.. . ...+.+.. +..++..+ .|||++.+.+++..
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~hpniv~~~~~~~~   80 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTG------QNVAIKKIMKPFSTPVLAKRTYR-ELKLLKHL-RHENIISLSDIFIS   80 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCC------CEEEEEEecccccccchhHHHHH-HHHHHHhc-CCCCeeeEeeeEec
Confidence            467999999999999999999987655      489999875422 1 12223333 33444444 68999999998865


Q ss_pred             -CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 -NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 -~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                       .+..|++|||+.+++.+.+..   ..+++..+..++.|++.||+|||+++|+||||||+|||+++++.++|+|||++..
T Consensus        81 ~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          81 PLEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             CCCcEEEEeehhccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence             567899999998887776642   4688899999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh--------
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK--------  270 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~--------  270 (632)
                      ...      ......++..|+|||.+.+  ...++.++|+|||||++|+|++|..||.+.........+...        
T Consensus       158 ~~~------~~~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  229 (328)
T cd07856         158 QDP------QMTGYVSTRYYRAPEIMLT--WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV  229 (328)
T ss_pred             cCC------CcCCCcccccccCceeeec--cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            322      1123457889999998753  135788999999999999999999999876643222111100        


Q ss_pred             ----------------ccCCCCC-----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 ----------------KEKPCIP-----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ----------------~~~p~~p-----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                      ......|     ..+++++.++|.+||+.||++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         230 INTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             HHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                            0001111     357889999999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-33  Score=284.09  Aligned_cols=249  Identities=21%  Similarity=0.297  Sum_probs=194.3

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      |++.+.||+|+||.||+|.+..++      +.||+|++....  ......+..+ ...+..+ .|++++.+++++...+.
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e-~~~l~~~-~~~~i~~~~~~~~~~~~   72 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTG------EIVALKKIRLDNEEEGIPSTALRE-ISLLKEL-KHPNIVKLLDVIHTERK   72 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCC------cEEEEEEeccccccccccHHHHHH-HHHHHhc-CCCCHHHHHhhhhcCCc
Confidence            677889999999999999987655      489999987643  1112222222 2344444 59999999999998899


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      .++||||++++|.+.+.+.. ..+++..++.++.|++.||+|||+++|+||||+|+||++++++.++|+|||+++.....
T Consensus        73 ~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~  151 (282)
T cd07829          73 LYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP  151 (282)
T ss_pred             eEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence            99999999999988887643 47999999999999999999999999999999999999999999999999998765322


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc----------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE----------  272 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~----------  272 (632)
                      .   .......++..|+|||.+...  ..++.++|+|||||++|||++|..||.+.+..+.+..+.....          
T Consensus       152 ~---~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07829         152 L---RTYTHEVVTLWYRAPEILLGS--KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV  226 (282)
T ss_pred             c---cccCccccCcCcCChHHhcCC--cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence            1   122233567889999998642  2578899999999999999999999988765544333321100          


Q ss_pred             ---------CCC--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 ---------KPC--------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ---------~p~--------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                               .+.        .-+..+.++.++|.+||+.||++||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                     000        01234789999999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=5.9e-33  Score=282.01  Aligned_cols=248  Identities=25%  Similarity=0.453  Sum_probs=193.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-----hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-----DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-----~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +|.+.+.||+|+||.||++.+.....      .+++|+++....     .....+. .+..++.. .+|+|++.+++.+.
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~l~~-l~h~~i~~~~~~~~   72 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVA------EERLKVLKEIPVGELNPNETVQAN-QEAQLLSK-LDHPAIVKFHASFL   72 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCC------cceEEEeccccccccCcchHHHHH-HHHHHHHh-CCCCcHHHHHHHHh
Confidence            58999999999999999998875532      456666553221     1111222 22233444 37999999999888


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .+...+++|||+.| ++.+.+...  ....+++..++.++.|++.||.|||+++++|+||||+||++++ +.++|+|||+
T Consensus        73 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~  151 (260)
T cd08222          73 ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGV  151 (260)
T ss_pred             cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCc
Confidence            88899999999984 776666542  3457899999999999999999999999999999999999975 6799999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      ++......   .......|++.|+|||.+..   ..++.++|+||||+++|+|++|..||...+..+....+. ....+.
T Consensus       152 ~~~~~~~~---~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~  224 (260)
T cd08222         152 SRLLMGSC---DLATTFTGTPYYMSPEALKH---QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPS  224 (260)
T ss_pred             eeecCCCc---ccccCCCCCcCccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-cCCCCC
Confidence            87653321   11223467899999999863   357789999999999999999999998776665555443 244555


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+..++.++.++|.+||..||++||++.++++
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            67788999999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=8e-34  Score=285.84  Aligned_cols=244  Identities=21%  Similarity=0.312  Sum_probs=196.7

Q ss_pred             CCeEEE-eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l~-~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      ++|++- +.||-|-.|+|-.+.++.+++      .+|+|+|....     . .+++.++--....|+||+.+++++..  
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~e------kfALKvL~Ds~-----K-ARrEVeLHw~~s~h~~iV~IidVyeNs~  128 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQE------KFALKVLLDSP-----K-ARREVELHWMASGHPHIVSIIDVYENSY  128 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchh------hhHHHHHhcCH-----H-HHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence            566665 578999999999999998885      79999985321     1 23333444556789999999998753  


Q ss_pred             --CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEec
Q 006772          120 --NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGDF  193 (632)
Q Consensus       120 --~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~DF  193 (632)
                        ...+.||||.|+ |.|+..+..+....|++.++..++.||+.|+.|||+.+|.||||||+|+|...   |..+||+||
T Consensus       129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDf  208 (400)
T KOG0604|consen  129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDF  208 (400)
T ss_pred             cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccc
Confidence              256889999999 57888887776678999999999999999999999999999999999999974   457899999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHh
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVI  269 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~  269 (632)
                      |+|+....    .....+.|-||+|.|||++..+   .|+...|+||+||++|-||.|.+||+....    ..+..+|..
T Consensus       209 GFAK~t~~----~~~L~TPc~TPyYvaPevlg~e---KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~  281 (400)
T KOG0604|consen  209 GFAKETQE----PGDLMTPCFTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT  281 (400)
T ss_pred             ccccccCC----CccccCCcccccccCHHHhCch---hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence            99987532    2344556789999999999755   588899999999999999999999986532    234445543


Q ss_pred             hccCCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 KKEKPCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~~~~p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +  ...||    +.+|.+.+++|+.+|..+|.+|.++.++++
T Consensus       282 g--qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  282 G--QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             c--CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            3  33344    357899999999999999999999999886

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-32  Score=275.64  Aligned_cols=236  Identities=25%  Similarity=0.418  Sum_probs=192.0

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      ||+|+||.||++.+...+      ..+|+|.+......   ....+ ..+..++..+ .|++++.+++.+..++..|++|
T Consensus         1 lg~G~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~-~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   72 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTG------KLYAMKVLKKKKIIKRKEVEHT-LTERNILSRI-NHPFIVKLHYAFQTEEKLYLVL   72 (250)
T ss_pred             CCCCCceEEEEEEECCCC------cEEEEEEeehhhhcchHHHHHH-HHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEE
Confidence            699999999999987544      48999998653321   22233 3333444554 5999999999999999999999


Q ss_pred             ecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCC
Q 006772          128 KFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD  206 (632)
Q Consensus       128 Ey~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~  206 (632)
                      ||+. ++|.+++...  ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.......   
T Consensus        73 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---  147 (250)
T cd05123          73 EYAPGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---  147 (250)
T ss_pred             ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC---
Confidence            9995 6888877653  368999999999999999999999999999999999999999999999999987653321   


Q ss_pred             CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006772          207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN  286 (632)
Q Consensus       207 ~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~  286 (632)
                      .......++..|++||.+.+.   ..+.++|+||||+++|+|++|..||...+..+....+..  ....+|..++.++.+
T Consensus       148 ~~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~  222 (250)
T cd05123         148 SRTNTFCGTPEYLAPEVLLGK---GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARD  222 (250)
T ss_pred             CcccCCcCCccccChHHhCCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHH
Confidence            122345678999999998643   477899999999999999999999988877666666543  556678889999999


Q ss_pred             HHHHhhhcCcCCCCCHHH
Q 006772          287 VIIGCFEYDLRNRPLMAD  304 (632)
Q Consensus       287 LI~~cL~~DP~~RPs~~e  304 (632)
                      ++.+||..||++||++.+
T Consensus       223 ~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         223 LISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHhcCCHhhCCCccc
Confidence            999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=307.19  Aligned_cols=239  Identities=21%  Similarity=0.285  Sum_probs=197.4

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|.+...||.|+|+.|-.+.+..++      +..++|++.+...+.     .++..++....+|+||+.+++.+.++.
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~------~~~~vkii~~~~~~~-----~~e~~~~~~~~~h~niv~~~~v~~~~~  389 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTD------QEPAVKIISKRADDN-----QDEIPISLLVRDHPNIVKSHDVYEDGK  389 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccc------cchhheecccccccc-----ccccchhhhhcCCCcceeecceecCCc
Confidence            478999999999999999999988766      478999997653322     222245566789999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE-ecCCcEEEEecCCceec
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL-SEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl-d~~g~vkL~DFGlak~~  199 (632)
                      +.|+|||++.| .+++.+...   +.....+..|+.+|+.|+.|||++|+|||||||+|||+ ++.++++|+|||.++..
T Consensus       390 ~~~~v~e~l~g~ell~ri~~~---~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~  466 (612)
T KOG0603|consen  390 EIYLVMELLDGGELLRRIRSK---PEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL  466 (612)
T ss_pred             eeeeeehhccccHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence            99999999996 455555433   33337888899999999999999999999999999999 69999999999999875


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhccCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~~~p~~p~  278 (632)
                      ...      ..+.+-|..|.|||+...   ..|++++||||||++||+||+|+.||...+.. ++..++    ..+.+..
T Consensus       467 ~~~------~~tp~~t~~y~APEvl~~---~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s~  533 (612)
T KOG0603|consen  467 ERS------CDTPALTLQYVAPEVLAI---QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFSE  533 (612)
T ss_pred             chh------hcccchhhcccChhhhcc---CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCcccc
Confidence            432      223355889999999973   47999999999999999999999999876654 454443    3455558


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+|.++++||++||+.||.+||++.+++.
T Consensus       534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  534 CVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            89999999999999999999999999885

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-32  Score=308.74  Aligned_cols=253  Identities=22%  Similarity=0.392  Sum_probs=210.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE---
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI---  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~---  119 (632)
                      +.+++.+.||.|.+|.||++.+++++      +.+|+|++.+....  ++.++.+..+++...+|||++.+++++..   
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~~~------~~aa~kI~~~~~d~--deEiE~eynil~~~~~hpnv~~fyg~~~k~~~   90 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVKTG------QLAAIKIMDPTEDE--EEEIELEYNMLKKYSHHPNVATFYGAFIKKDP   90 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeeecC------ceeeeEeecCCccc--cHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence            56899999999999999999988766      47899998775543  23344555677788899999999998864   


Q ss_pred             --CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          120 --NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       120 --~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                        +++++||||||. ||.-|++....+.++.|+.+..|++.++.||.+||.+.++|||||-.|||++.++.+||+|||.+
T Consensus        91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvS  170 (953)
T KOG0587|consen   91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVS  170 (953)
T ss_pred             CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeee
Confidence              479999999998 79999998888889999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ..+...   .....+.+|||.|||||++..+.  ...|+.++|+||||++..||.-|.+|+.++-+...+..|.. +.+|
T Consensus       171 aQldsT---~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR-NPPP  246 (953)
T KOG0587|consen  171 AQLDST---VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPP  246 (953)
T ss_pred             eeeecc---cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC-CCCc
Confidence            776442   22335568999999999997542  33577899999999999999999999998877655444331 1222


Q ss_pred             C--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~--~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .  .|..++.++.++|..||.+|.++||++.++++
T Consensus       247 kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  247 KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             cccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            1  24678899999999999999999999998875

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-34  Score=287.07  Aligned_cols=258  Identities=22%  Similarity=0.314  Sum_probs=205.3

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..++.++++-+..||.|.||+|++-.++.++      +..|||.+........+..+..+.....+..++|+|++++|+.
T Consensus        59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg------~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~  132 (361)
T KOG1006|consen   59 HTFTSDNLQDLGEIGNGAFGTVNKMLHKPSG------KLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL  132 (361)
T ss_pred             cccccchHHHHHHhcCCcchhhhhhhcCccC------cEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence            4467788888899999999999999998876      4899999987665444444444444455667899999999999


Q ss_pred             EECCEEEEEEecCCCCHHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEec
Q 006772          118 VINGKICIAMKFYEGSVGDRIA---QQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~---~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      ..++..+|-||+|.-|+..+..   ......+++.-.-.++...+.||.||-. .+|||||+||+||||+..|.+|||||
T Consensus       133 F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDF  212 (361)
T KOG1006|consen  133 FSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDF  212 (361)
T ss_pred             hcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecc
Confidence            9999999999999976554433   2345688999888999999999999987 58999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~  272 (632)
                      |++-.+...    ...+.-.|...|||||.+..... .|+-+||+||||++|||+.||..||.+.+. -+...+++. +.
T Consensus       213 GIcGqLv~S----iAkT~daGCrpYmAPERi~p~~~-gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~-gd  286 (361)
T KOG1006|consen  213 GICGQLVDS----IAKTVDAGCRPYMAPERIDPSDK-GYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI-GD  286 (361)
T ss_pred             cchHhHHHH----HHhhhccCCccccChhccCCccC-CcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc-CC
Confidence            997554321    11223368889999999987643 689999999999999999999999998653 333334443 33


Q ss_pred             CCC--CCC---CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPC--IPS---GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~--~p~---~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .|.  .+.   ..+..+..+|.-||.+|-..||.+.++++
T Consensus       287 pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  287 PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            332  222   37889999999999999999999999886

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.8e-33  Score=305.19  Aligned_cols=245  Identities=23%  Similarity=0.357  Sum_probs=196.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEE---EEEecCC-chhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELA---VKMLLPL-KEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VA---IK~l~~~-~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .-+++...||+|+|=+||+|.|..++      .+||   ||.-... +....+.+ ..+..+++. ..|+||++++..+.
T Consensus        40 Ry~k~~evLGrGafKtVYka~De~~g------iEVAWnqvk~~d~~q~~~~leR~-~~Ev~lLKs-L~H~NIirfy~SW~  111 (632)
T KOG0584|consen   40 RYLKFDEVLGRGAFKTVYKAFDEEEG------IEVAWNQVKIRDVTQSPEELERL-YSEVHLLKS-LKHPNIIRFYDSWV  111 (632)
T ss_pred             ceeehhhhcccccceeeeeccccccc------hhhHHHHHhHHHhhcChHHHHHH-HHHHHHHcc-CCCCceeeeeehee
Confidence            44677889999999999999986544      2444   2221111 22222333 333344444 58999999999887


Q ss_pred             ECC--EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEe-cCCcEEEEe
Q 006772          119 ING--KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLS-EHDQLVLGD  192 (632)
Q Consensus       119 ~~~--~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld-~~g~vkL~D  192 (632)
                      +..  .+-+|+|++. |+|..++.+.  ++++...+..|++||++||.|||++.  |||||||.+||+|+ ..|.+||+|
T Consensus       112 d~~n~~in~iTEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGD  189 (632)
T KOG0584|consen  112 DTDNKTINFITELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGD  189 (632)
T ss_pred             cCCCceeeeeeecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecc
Confidence            654  4789999998 8988888765  57899999999999999999999985  99999999999998 458999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVVIKK  271 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~i~~~~  271 (632)
                      +|||.....     ......+|||.|||||++..    .|++.+||||||.+|+||+|+.-||.-+ ++.++|.++..+.
T Consensus       190 LGLAtl~r~-----s~aksvIGTPEFMAPEmYEE----~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi  260 (632)
T KOG0584|consen  190 LGLATLLRK-----SHAKSVIGTPEFMAPEMYEE----NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI  260 (632)
T ss_pred             hhHHHHhhc-----cccceeccCccccChHHHhh----hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC
Confidence            999987632     34455789999999999863    5899999999999999999999999875 5889999988665


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+..+...-.++++++|.+||.. ..+||++.|||.
T Consensus       261 KP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  261 KPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             CHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            55455566689999999999999 999999999997

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-33  Score=299.21  Aligned_cols=241  Identities=22%  Similarity=0.351  Sum_probs=201.8

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      +.||+|.||+||-|.+++++      +.||||++.+..- ...+..++.+..+++++ +||.|+.+...|++.+.+|+||
T Consensus       570 evLGSGQFG~VYgg~hRktG------rdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFVVM  642 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTG------RDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPERVFVVM  642 (888)
T ss_pred             hhccCCcceeeecceecccC------ceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEEEe
Confidence            78999999999999999877      5899999976532 23334456565666654 8999999999999999999999


Q ss_pred             ecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cEEEEecCCceeccCCCC
Q 006772          128 KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPYLLLGRSL  204 (632)
Q Consensus       128 Ey~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~vkL~DFGlak~~~~~~~  204 (632)
                      |-+.|+.++.+.....+++++....++..||+.||.|||.++|+|.||||+||||.+..   .+||||||+|+.+...+.
T Consensus       643 EKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF  722 (888)
T KOG4236|consen  643 EKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF  722 (888)
T ss_pred             hhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence            99999999999988889999999999999999999999999999999999999997543   799999999998755433


Q ss_pred             CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC----CCC
Q 006772          205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP----SGL  280 (632)
Q Consensus       205 ~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p----~~l  280 (632)
                          ..+.+|||.|+|||+++.+   .|+..-|+||.|+++|--|+|..||..+.  ++..+|..  ...-+|    ..+
T Consensus       723 ----RrsVVGTPAYLaPEVLrnk---GyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQN--AaFMyPp~PW~ei  791 (888)
T KOG4236|consen  723 ----RRSVVGTPAYLAPEVLRNK---GYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQN--AAFMYPPNPWSEI  791 (888)
T ss_pred             ----hhhhcCCccccCHHHHhhc---cccccccceeeeEEEEEEecccccCCCcc--chhHHhhc--cccccCCCchhhc
Confidence                2457899999999999854   68889999999999999999999997543  33344432  222223    578


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++++.+||+.+|+..-++|.+.+.-+.
T Consensus       792 s~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  792 SPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             CHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            999999999999999999999876553

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-32  Score=289.01  Aligned_cols=257  Identities=20%  Similarity=0.363  Sum_probs=204.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      .++++.+.||+|.||+||+|.++..        .||||++....   ...++++.+.-...+.+|+||..+.+.-..+  
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrGe--------~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g  279 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRGE--------DVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNG  279 (513)
T ss_pred             heeEEEEEecCccccceeeccccCC--------ceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence            7899999999999999999999753        69999996533   2444444433334457899999887765433  


Q ss_pred             --CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh--------CCceeeeeeCCeEEEecCCcEE
Q 006772          121 --GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS--------IGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       121 --~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs--------~~IvHRDLKP~NILld~~g~vk  189 (632)
                        .+++||++|.+ |||.|++.+.   .++....++++..+|.||+|||.        -.|.|||||..|||+.++|.+.
T Consensus       280 s~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~  356 (513)
T KOG2052|consen  280 SWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  356 (513)
T ss_pred             ceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence              37999999998 9999999763   79999999999999999999995        2499999999999999999999


Q ss_pred             EEecCCceeccCC-CCCCCccccccCCCccCCccccCCCCCCCC---CcccccchhHHHHHHHHhC----------CCCC
Q 006772          190 LGDFGIPYLLLGR-SLSDSDMALRLGTPNYMAPEQWEPEVRGPI---SFETDTWGFGCSIMEMLTG----------IQPW  255 (632)
Q Consensus       190 L~DFGlak~~~~~-~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~---t~ksDvwSlGvvL~EmltG----------~~PF  255 (632)
                      |+|+|||-..... ...+......+||.+|||||++........   -..+||||||.++||++..          +.||
T Consensus       357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py  436 (513)
T KOG2052|consen  357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY  436 (513)
T ss_pred             EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence            9999999766443 222333455789999999999975432111   1468999999999999863          6788


Q ss_pred             CC-----CCHHHHHHHHHhhccCCCCCCCCC-----HHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          256 FG-----KSVEEIYHSVVIKKEKPCIPSGLP-----PAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       256 ~~-----~~~~ei~~~i~~~~~~p~~p~~lp-----~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+     .+.+++..-+..+..+|.+|..+.     ..+..+|+.||..||.-|.++=-|.+.|.++.
T Consensus       437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence            75     345666666667788888887654     36778999999999999999988888887765

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=3e-32  Score=274.79  Aligned_cols=219  Identities=18%  Similarity=0.219  Sum_probs=174.9

Q ss_pred             cCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCC-C
Q 006772           54 GPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G  132 (632)
Q Consensus        54 G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~-G  132 (632)
                      |.||+||+|.+..++      +.||+|.+......     .++...+  ....|+|++.+++.+..++..|++|||++ |
T Consensus         4 g~~~~v~~~~~~~~~------~~~~~K~i~~~~~~-----~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQ------QTFILKGLRKSSEY-----SRERLTI--IPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCC------cEEEEEeecchhhh-----hhHHHHH--HhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            899999999998766      48999999754321     1111122  22358999999999999999999999998 5


Q ss_pred             CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccc
Q 006772          133 SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR  212 (632)
Q Consensus       133 sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~  212 (632)
                      +|.+++...  ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.++|+|||++......      ....
T Consensus        71 ~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------~~~~  142 (237)
T cd05576          71 KLWSHISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------CDGE  142 (237)
T ss_pred             CHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc------cccC
Confidence            788887653  36899999999999999999999999999999999999999999999999987654221      1223


Q ss_pred             cCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006772          213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCF  292 (632)
Q Consensus       213 ~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL  292 (632)
                      .++..|+|||++..   ..++.++|+||+||++|||++|..||...... .     .......+|..+++.++++|.+||
T Consensus       143 ~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~li~~~l  213 (237)
T cd05576         143 AVENMYCAPEVGGI---SEETEACDWWSLGAILFELLTGKTLVECHPSG-I-----NTHTTLNIPEWVSEEARSLLQQLL  213 (237)
T ss_pred             CcCccccCCcccCC---CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----ccccccCCcccCCHHHHHHHHHHc
Confidence            45778999999863   35788999999999999999999987643221 1     112233467788999999999999


Q ss_pred             hcCcCCCCCH
Q 006772          293 EYDLRNRPLM  302 (632)
Q Consensus       293 ~~DP~~RPs~  302 (632)
                      +.||++||++
T Consensus       214 ~~dp~~R~~~  223 (237)
T cd05576         214 QFNPTERLGA  223 (237)
T ss_pred             cCCHHHhcCC
Confidence            9999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-33  Score=283.26  Aligned_cols=251  Identities=20%  Similarity=0.320  Sum_probs=202.9

Q ss_pred             eEEE-eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           45 LKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        45 y~l~-~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      |++. +.||+|+|+.|--+...+++      .+||||++.+........++++ .+++..++.|+||+.|..+|+++...
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~------~EYAVKiidKq~gHsR~RvfRE-Ve~f~~Cqgh~nilqLiefFEdd~~F  151 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTG------KEYAVKIIDKQPGHSRSRVFRE-VETFYQCQGHKNILQLIEFFEDDTRF  151 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccc------hhhhhhhhhcCCchHHHHHHHH-HHHHHHhcCCccHHHHHHHhcccceE
Confidence            4544 57899999999999887766      4899999988755444444444 46677889999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc---EEEEecCCceec
Q 006772          124 CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLL  199 (632)
Q Consensus       124 ~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~---vkL~DFGlak~~  199 (632)
                      |||||-|. |+|+..+.++  ..|++.++.++..+|+.||.|||.+||.||||||+|||-...++   +||+||.+..-.
T Consensus       152 YLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  152 YLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             EEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence            99999998 6888888765  47999999999999999999999999999999999999876554   799999886533


Q ss_pred             cC-C---CCCCCccccccCCCccCCccccC---CCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-------------
Q 006772          200 LG-R---SLSDSDMALRLGTPNYMAPEQWE---PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-------------  259 (632)
Q Consensus       200 ~~-~---~~~~~~~~~~~GT~~YmAPE~~~---~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-------------  259 (632)
                      .- .   ........+.+|+..|||||+..   ++ ...|+.+.|.||||++||-||.|.+||.|.-             
T Consensus       230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~q-A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQ-ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             ccCCCCCCCCCccccCcccchhhcchhHHhhhccc-cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence            11 1   11223445678999999999874   22 3358899999999999999999999998632             


Q ss_pred             --HHHHHHHHHhhccCCCCCC----CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          260 --VEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       260 --~~ei~~~i~~~~~~p~~p~----~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                        ...+++.|.  .....||+    .++.+.+++|+.+|.+|+.+|.++..++.
T Consensus       309 ~CQ~~LFesIQ--EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  309 VCQNKLFESIQ--EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHh--ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence              234566655  44556674    58999999999999999999999888775

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=6.3e-32  Score=306.59  Aligned_cols=269  Identities=16%  Similarity=0.176  Sum_probs=174.0

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEe-eE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWL-HG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l-~~  115 (632)
                      .+.+..++|++.+.||+|+||.||+|.+..+..  ..+..||||.+......  +....+  .+ ... .+.++..+ ..
T Consensus       126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~--~~~~~vAvK~~~~~~~~--e~~~~e--~l-~~~-~~~~~~~~~~~  197 (566)
T PLN03225        126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQS--KKEGKYVLKKATEYGAV--EIWMNE--RV-RRA-CPNSCADFVYG  197 (566)
T ss_pred             CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCcc--ccCcEEEEEEecccchh--HHHHHH--HH-Hhh-chhhHHHHHHh
Confidence            455677899999999999999999999876521  12358999998643321  111111  11 110 11111111 11


Q ss_pred             ----E-EEECCEEEEEEecCC-CCHHHHHHHhcC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCce
Q 006772          116 ----I-SVINGKICIAMKFYE-GSVGDRIAQQRG------------------GKLPLPDILRYGIQLAKGISDLHSIGLL  171 (632)
Q Consensus       116 ----~-~~~~~~l~LVmEy~~-GsL~d~l~~~~~------------------~~l~~~~~~~ia~qIa~gL~yLHs~~Iv  171 (632)
                          . ...+..++|||||+. |+|.+++.....                  .......+..++.||+.||+|||+++|+
T Consensus       198 ~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIi  277 (566)
T PLN03225        198 FLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIV  277 (566)
T ss_pred             hhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEE
Confidence                1 245678999999998 577777654210                  0112334667999999999999999999


Q ss_pred             eeeeeCCeEEEec-CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCC-------------------C
Q 006772          172 VLNLKPSNLLLSE-HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-------------------P  231 (632)
Q Consensus       172 HRDLKP~NILld~-~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g-------------------~  231 (632)
                      ||||||+|||++. ++.+||+|||+|+.+....  .......+||+.|||||++......                   .
T Consensus       278 HRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~  355 (566)
T PLN03225        278 HRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN  355 (566)
T ss_pred             eCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence            9999999999996 6899999999997543211  1122346789999999976422111                   2


Q ss_pred             CCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc---------cCCCCC----------CCCCHHHHHHHHHhh
Q 006772          232 ISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK---------EKPCIP----------SGLPPAVENVIIGCF  292 (632)
Q Consensus       232 ~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~---------~~p~~p----------~~lp~~l~~LI~~cL  292 (632)
                      ++.++|||||||+||||+++..|+... .......+....         ..+...          ...+....+||.+||
T Consensus       356 ~~~k~DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL  434 (566)
T PLN03225        356 LPDRFDIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM  434 (566)
T ss_pred             CCCCcccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence            345679999999999999977664322 111111111000         000000          111234568999999


Q ss_pred             hcCcCCCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          293 EYDLRNRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       293 ~~DP~~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                      ++||++|||+.++++      ++++....+
T Consensus       435 ~~dP~kR~ta~e~L~------Hpff~~~~~  458 (566)
T PLN03225        435 RFKGRQRISAKAALA------HPYFDREGL  458 (566)
T ss_pred             cCCcccCCCHHHHhC------CcCcCCCCc
Confidence            999999999999887      677765544

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4e-33  Score=308.79  Aligned_cols=281  Identities=22%  Similarity=0.340  Sum_probs=224.6

Q ss_pred             CccccccccCCCCCCCCcCC-CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHH
Q 006772           23 PDHLRTVVATPTQTRPWIDP-TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEEL  100 (632)
Q Consensus        23 ~~~~~~~~~~~~~~~~~I~~-~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~i  100 (632)
                      .|.+..+...++...-.|+. ..++..++||+|+||+||+|.+...++  ....+||||++..... ....+++++. .+
T Consensus       675 ~eplapS~~~~n~~~lrI~kEtelkk~kvLGsgAfGtV~kGiw~Pege--~vKipVaiKvl~~~t~~~~s~e~LdeA-l~  751 (1177)
T KOG1025|consen  675 VEPLAPSGFAANLALLRILKETELKKDKVLGSGAFGTVYKGIWIPEGE--NVKIPVAIKVLIEFTSPKASIELLDEA-LR  751 (1177)
T ss_pred             cCccccccccchhhheeechhhhhhhhceeccccceeEEeeeEecCCc--eecceeEEEEeeccCCchhhHHHHHHH-HH
Confidence            33444445555555555554 456777899999999999999876554  3345899999975433 3334444443 33


Q ss_pred             hhhccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCe
Q 006772          101 FPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN  179 (632)
Q Consensus       101 l~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~N  179 (632)
                      +.+ .+|+|+++|.+++.... +.||++|++ |.|+|++..++ ..+...+.+.|..|||+||.|||.++++||||-.+|
T Consensus       752 mas-ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRN  828 (1177)
T KOG1025|consen  752 MAS-LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARN  828 (1177)
T ss_pred             Hhc-CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhh
Confidence            344 48999999999997765 889999999 89999998764 588999999999999999999999999999999999


Q ss_pred             EEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCC
Q 006772          180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGK  258 (632)
Q Consensus       180 ILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~  258 (632)
                      +|+..-.++|++|||+++.+......-. .....-.+.|||-|.++   ...|+.++|||||||++||++| |..|+.+.
T Consensus       829 VLVksP~hvkitdfgla~ll~~d~~ey~-~~~gK~pikwmale~i~---~~~~thqSDVWsfGVtiWElmTFGa~Py~gi  904 (1177)
T KOG1025|consen  829 VLVKSPNHVKITDFGLAKLLAPDEKEYS-APGGKVPIKWMALESIR---IRKYTHQSDVWSFGVTIWELMTFGAKPYDGI  904 (1177)
T ss_pred             eeecCCCeEEEEecchhhccCccccccc-ccccccCcHHHHHHHhh---ccCCCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence            9999999999999999998754322111 11112257899999987   5579999999999999999999 99999999


Q ss_pred             CHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +.+++-..+ ..+++...|+.++.++..+|.+||..|+..||+++++...|.++.+
T Consensus       905 ~~~eI~dll-e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  905 PAEEIPDLL-EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             CHHHhhHHH-hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            999886554 4567788899999999999999999999999999999988876643

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.98  E-value=1.3e-32  Score=316.29  Aligned_cols=251  Identities=22%  Similarity=0.335  Sum_probs=185.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      ++|+.++.||+||||.||+++++-.+      +.||||++.-......-.-..++...++++ +||||+.++..+...  
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDG------r~YAIKKIpl~~s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDG------REYAIKKIPLKASDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccc------hhhhhhhccCchHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCC
Confidence            57888999999999999999987544      689999997543222222233333445554 789998876321100  


Q ss_pred             --------------------------------------------------------------------------------
Q 006772          121 --------------------------------------------------------------------------------  120 (632)
Q Consensus       121 --------------------------------------------------------------------------------  120 (632)
                                                                                                      
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------------CEEEEEEecCCCCHHHHHHHhcCCCC-CHHHHHHHHHHHHHHH
Q 006772          121 -------------------------------------GKICIAMKFYEGSVGDRIAQQRGGKL-PLPDILRYGIQLAKGI  162 (632)
Q Consensus       121 -------------------------------------~~l~LVmEy~~GsL~d~l~~~~~~~l-~~~~~~~ia~qIa~gL  162 (632)
                                                           ..+||=||||+-++++.+.+... .. ....+++++++|+.||
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-~~~~~d~~wrLFreIlEGL  710 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-FNSQRDEAWRLFREILEGL  710 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-cchhhHHHHHHHHHHHHHH
Confidence                                                 12789999999888877766532 22 4678999999999999


Q ss_pred             HHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc------------C---CCCCCCccccccCCCccCCccccCCC
Q 006772          163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL------------G---RSLSDSDMALRLGTPNYMAPEQWEPE  227 (632)
Q Consensus       163 ~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~------------~---~~~~~~~~~~~~GT~~YmAPE~~~~~  227 (632)
                      .|+|+.|||||||||.||+||+++.+||+|||+|+...            .   ......+.+..+||.-|+|||++.+.
T Consensus       711 aYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~  790 (1351)
T KOG1035|consen  711 AYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT  790 (1351)
T ss_pred             HHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence            99999999999999999999999999999999998721            0   01122245667899999999999876


Q ss_pred             CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC------CCHHHHHHHHHhhhcCcCCCCC
Q 006772          228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG------LPPAVENVIIGCFEYDLRNRPL  301 (632)
Q Consensus       228 ~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~------lp~~l~~LI~~cL~~DP~~RPs  301 (632)
                      ....|+.|+|+||||++++||+.   ||.. .++.+  .++..-..+.+|..      --+.-..+|+.|++.||.+|||
T Consensus       791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~T-sMERa--~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPt  864 (1351)
T KOG1035|consen  791 SSNKYNSKIDMYSLGIVLFEMLY---PFGT-SMERA--SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPT  864 (1351)
T ss_pred             ccccccchhhhHHHHHHHHHHhc---cCCc-hHHHH--HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCC
Confidence            44579999999999999999984   5543 22221  12222223333322      2246678999999999999999


Q ss_pred             HHHHHH
Q 006772          302 MADILH  307 (632)
Q Consensus       302 ~~ell~  307 (632)
                      +.|+|+
T Consensus       865 A~eLL~  870 (1351)
T KOG1035|consen  865 ATELLN  870 (1351)
T ss_pred             HHHHhh
Confidence            999986

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.98  E-value=3.2e-33  Score=282.55  Aligned_cols=261  Identities=21%  Similarity=0.288  Sum_probs=196.8

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +...|++...||+|+||.||+|..++++.  .....+|||+++..+..  -.....++ ..++..+ +|+|++.|..++.
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~--kr~k~yAiKkfk~~kd~tGiS~SAcRE-iaL~REl-~h~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTND--KRTKEYAIKKFKGEKDGTGISMSACRE-IALLREL-KHPNVISLVKVFL   97 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCc--ccchhhHHHHHhccCCCCCcCHHHHHH-HHHHHHh-cCCcchhHHHHHh
Confidence            34689999999999999999997766553  22458999999765321  11222222 2333333 7899999888877


Q ss_pred             E-CCEEEEEEecCCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC----CcEEE
Q 006772          119 I-NGKICIAMKFYEGSVGDRIAQQR---GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH----DQLVL  190 (632)
Q Consensus       119 ~-~~~l~LVmEy~~GsL~d~l~~~~---~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~----g~vkL  190 (632)
                      . +..+++++||.+.+|+..+..++   .+.++...+..++.||+.|+.|||++=|+||||||.|||+..+    |.+||
T Consensus        98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             ccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEe
Confidence            6 78999999999999999987663   3678999999999999999999999999999999999999887    89999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---------
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---------  261 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---------  261 (632)
                      +|||+++.+...-.+-.....++-|.+|.|||.+.+..  .||.+.|+|+.||++.||+|-++.|.+...+         
T Consensus       178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~--hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~  255 (438)
T KOG0666|consen  178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGAR--HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH  255 (438)
T ss_pred             ecccHHHHhhccccccccCCceEEEEEecChHHhcccc--cccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence            99999998754432222223345699999999999863  5899999999999999999998888764321         


Q ss_pred             HHHHHHHhhccCC---------CCC--------------C------------CCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          262 EIYHSVVIKKEKP---------CIP--------------S------------GLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       262 ei~~~i~~~~~~p---------~~p--------------~------------~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                      +...+|..--..|         .+|              .            .-++...+|+.++|++||-+|.++++.+
T Consensus       256 dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAl  335 (438)
T KOG0666|consen  256 DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQAL  335 (438)
T ss_pred             HHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHh
Confidence            1112222100000         001              1            1234578999999999999999999877


Q ss_pred             H
Q 006772          307 H  307 (632)
Q Consensus       307 ~  307 (632)
                      +
T Consensus       336 e  336 (438)
T KOG0666|consen  336 E  336 (438)
T ss_pred             c
Confidence            5

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.1e-32  Score=282.24  Aligned_cols=257  Identities=21%  Similarity=0.324  Sum_probs=196.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHH---HHHHHhhhccCCCceeEeeEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVN---KFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~---~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++|.+++.||+|||++||+|.+...      .+.||+|+-..-+.   +..+.+..   ++..+- +-.+||.|++++++
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~E------qRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIH-KeLDHpRIVKlYDy  535 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTE------QRYVAVKIHQLNKNWRDEKKENYHKHACREYRIH-KELDHPRIVKLYDY  535 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccch------hheeeEeeehhccchhhHhhhhHHHHHHHHHhhh-hccCcceeeeeeee
Confidence            6799999999999999999997643      36899997532111   11111111   122333 33479999999998


Q ss_pred             EEE-CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--CceeeeeeCCeEEEe---cCCcEEE
Q 006772          117 SVI-NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI--GLLVLNLKPSNLLLS---EHDQLVL  190 (632)
Q Consensus       117 ~~~-~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~--~IvHRDLKP~NILld---~~g~vkL  190 (632)
                      +.. .+..|-|+|||+|+.+|+.... .+.+++.+++.|+.||+.||.||...  .|||-||||.||||-   ..|.+||
T Consensus       536 fslDtdsFCTVLEYceGNDLDFYLKQ-hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI  614 (775)
T KOG1151|consen  536 FSLDTDSFCTVLEYCEGNDLDFYLKQ-HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI  614 (775)
T ss_pred             eeeccccceeeeeecCCCchhHHHHh-hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence            864 5789999999999888877654 35899999999999999999999986  599999999999995   4578999


Q ss_pred             EecCCceeccCCCCCCCc----cccccCCCccCCccccC-CCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHH
Q 006772          191 GDFGIPYLLLGRSLSDSD----MALRLGTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIY  264 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~----~~~~~GT~~YmAPE~~~-~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~  264 (632)
                      +|||+++.+...+.....    .+...||-+|++||.+. +.....++.++||||.||++|..+.|+.||.... ..+++
T Consensus       615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL  694 (775)
T KOG1151|consen  615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL  694 (775)
T ss_pred             eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH
Confidence            999999998765544211    23457999999999885 2223457899999999999999999999998753 33443


Q ss_pred             HH-HHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          265 HS-VVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       265 ~~-i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +. .+.+...-.||  +.+++++.++|++||++.-++|....++..
T Consensus       695 qeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  695 QENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             hhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            32 22333444555  568999999999999999999998777654

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.7e-32  Score=280.43  Aligned_cols=249  Identities=21%  Similarity=0.305  Sum_probs=192.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccC-CC----ceeEeeEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE-SQ----SVCWLHGI  116 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~-h~----~I~~l~~~  116 (632)
                      ..+|.+...+|+|.||.|-.+.++.+.      ..||||+++.........  ..+...++++.+ -|    -++.+.++
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~------~~vAlKIik~V~kYreAa--~iEi~vLqki~~~DP~g~~rcv~m~~w  159 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETK------EHVALKIIKNVDKYREAA--LIEIEVLQKINESDPNGKFRCVQMRDW  159 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCC------ceehHHHHHHHHHHhhHH--HHHHHHHHHHHhcCCCCceEEEeeehh
Confidence            467999999999999999999998764      489999997654332222  112233444422 22    36677788


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC-----------
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-----------  185 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~-----------  185 (632)
                      |.-.++.|||.|.+.-|+.|.+..+...++++..++.++.||+.+++|||+.+++|-||||+|||+-++           
T Consensus       160 FdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  160 FDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             hhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence            888999999999999899999988777899999999999999999999999999999999999999432           


Q ss_pred             ---------CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCC
Q 006772          186 ---------DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF  256 (632)
Q Consensus       186 ---------g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~  256 (632)
                               -.++|+|||.|....      ...+..+.|..|.|||++.+-   +++.++||||+||+|+|+.||...|.
T Consensus       240 ~~~~r~~ks~~I~vIDFGsAtf~~------e~hs~iVsTRHYRAPEViLgL---GwS~pCDvWSiGCIL~ElytG~~LFq  310 (415)
T KOG0671|consen  240 VCFIRPLKSTAIKVIDFGSATFDH------EHHSTIVSTRHYRAPEVILGL---GWSQPCDVWSIGCILVELYTGETLFQ  310 (415)
T ss_pred             cceeccCCCcceEEEecCCcceec------cCcceeeeccccCCchheecc---CcCCccCceeeeeEEEEeeccceecc
Confidence                     258999999887532      223556789999999999854   79999999999999999999999999


Q ss_pred             CCCHHH---HHHHHHh--------hc--------cCC-----------------CCC--------CCCCHHHHHHHHHhh
Q 006772          257 GKSVEE---IYHSVVI--------KK--------EKP-----------------CIP--------SGLPPAVENVIIGCF  292 (632)
Q Consensus       257 ~~~~~e---i~~~i~~--------~~--------~~p-----------------~~p--------~~lp~~l~~LI~~cL  292 (632)
                      +.+..+   +.+.|..        +.        .+.                 +.|        +....++.+||++||
T Consensus       311 tHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL  390 (415)
T KOG0671|consen  311 THENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML  390 (415)
T ss_pred             cCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence            876544   3333320        00        000                 011        001126889999999


Q ss_pred             hcCcCCCCCHHHHHH
Q 006772          293 EYDLRNRPLMADILH  307 (632)
Q Consensus       293 ~~DP~~RPs~~ell~  307 (632)
                      ..||.+|+|+.|++.
T Consensus       391 ~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  391 EFDPARRITLREALS  405 (415)
T ss_pred             ccCccccccHHHHhc
Confidence            999999999999876

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=295.32  Aligned_cols=255  Identities=22%  Similarity=0.349  Sum_probs=191.6

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC----
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN----  120 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~----  120 (632)
                      +..-+.||+|+||.||+++++.++      +.||||.+++.......+..-++.++++++. |+||+.+.++-...    
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG------~~vAvK~~~~~~~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~   87 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETG------RLVAVKTFNKESSLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGL   87 (732)
T ss_pred             eeehhhhcCCccceeeeecccccc------cchhHHhhhhhcccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCc
Confidence            456688999999999999998877      4899999987654444455555567788886 99999998875443    


Q ss_pred             --CEEEEEEecCC-CCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec--CC--cEEEEe
Q 006772          121 --GKICIAMKFYE-GSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE--HD--QLVLGD  192 (632)
Q Consensus       121 --~~l~LVmEy~~-GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~--~g--~vkL~D  192 (632)
                        ....+|||||. |+|...+.+-. ...+++.+.+.++.+++.||.|||.+||+||||||.||++-.  +|  ..||+|
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtD  167 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTD  167 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeec
Confidence              34679999998 57766665432 257999999999999999999999999999999999999853  34  469999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC----HHHHHHHHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS----VEEIYHSVV  268 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~----~~ei~~~i~  268 (632)
                      ||.|+.+...    +...+..||..|++||++..  ...|+.-+|.|||||++||.+||..||....    ..++...+.
T Consensus       168 fG~Arel~d~----s~~~S~vGT~~YLhPel~E~--q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~  241 (732)
T KOG4250|consen  168 FGAARELDDN----SLFTSLVGTEEYLHPELYER--QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHII  241 (732)
T ss_pred             ccccccCCCC----CeeeeecCchhhcChHHHhh--ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhh
Confidence            9999976543    35567889999999999973  2468899999999999999999999986532    223333333


Q ss_pred             hhcc-------------------CCCCCCCCCH----HHHHHHHHhhhcCcCCCC--CHHHHHHHHHhh
Q 006772          269 IKKE-------------------KPCIPSGLPP----AVENVIIGCFEYDLRNRP--LMADILHAFESS  312 (632)
Q Consensus       269 ~~~~-------------------~p~~p~~lp~----~l~~LI~~cL~~DP~~RP--s~~ell~~Le~~  312 (632)
                      .++.                   ..++|..+++    .+..++..+|.-||++|-  .+.+....+..+
T Consensus       242 tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI  310 (732)
T KOG4250|consen  242 TKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI  310 (732)
T ss_pred             ccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence            1111                   1123444444    455678888999999998  554444444333

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=6e-31  Score=316.48  Aligned_cols=243  Identities=23%  Similarity=0.312  Sum_probs=182.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..+...+.||+|+||.||+|.+...+      ..||||.+.........     +...+.++ +||||+.+++++..++.
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~-----~~~~l~~l-~HpnIv~~~~~~~~~~~  757 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNG------MQFVVKEINDVNSIPSS-----EIADMGKL-QHPNIVKLIGLCRSEKG  757 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCC------cEEEEEEccCCccccHH-----HHHHHhhC-CCCCcceEEEEEEcCCC
Confidence            34666789999999999999986554      48999998654322111     12334444 79999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH---SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLH---s~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .|+||||++ |+|.+++.     .+++..+..++.|++.||+|||   +.+|+||||||+|||++.++..++. ||.+..
T Consensus       758 ~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~  831 (968)
T PLN00113        758 AYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL  831 (968)
T ss_pred             CEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence            999999998 67777763     4789999999999999999999   6699999999999999999888875 665433


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH--HHHHHHH--Hhh----
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV--EEIYHSV--VIK----  270 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~--~ei~~~i--~~~----  270 (632)
                      ...       .....||+.|||||++.+   ..++.++|||||||++|||++|+.||.....  ..+....  ...    
T Consensus       832 ~~~-------~~~~~~t~~y~aPE~~~~---~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  901 (968)
T PLN00113        832 LCT-------DTKCFISSAYVAPETRET---KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL  901 (968)
T ss_pred             ccc-------CCCccccccccCcccccC---CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccch
Confidence            211       112367899999999874   4689999999999999999999999854211  0111100  000    


Q ss_pred             --ccCCCCC------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          271 --KEKPCIP------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       271 --~~~p~~p------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                        ...+...      .....++.+++.+||+.||++||+|.|+++.|+.+.
T Consensus       902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             hheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence              0011111      112236778999999999999999999999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=5e-30  Score=253.91  Aligned_cols=235  Identities=25%  Similarity=0.425  Sum_probs=186.9

Q ss_pred             CceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCCC-
Q 006772           55 PFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-  132 (632)
Q Consensus        55 ~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~G-  132 (632)
                      +||.||+|.+..++      +.+|+|++....... ...+.++ ...+..+ +|++++.+.+.+......+++|||+++ 
T Consensus         1 ~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~e-~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~   72 (244)
T smart00220        1 SFGKVYLARDKKTG------KLVAIKVIKKEKIKKKRERILRE-ISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGG   72 (244)
T ss_pred             CceEEEEEEECCCC------cEEEEEEecccccccHHHHHHHH-HHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCC
Confidence            58999999987644      489999997654333 3333333 3444454 899999999999998999999999996 


Q ss_pred             CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccc
Q 006772          133 SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR  212 (632)
Q Consensus       133 sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~  212 (632)
                      +|.+++....  .+++..++.++.+++.+|.|||+.+++|+||+|.||+++.++.++|+|||.+.......    .....
T Consensus        73 ~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~  146 (244)
T smart00220       73 DLFDLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTF  146 (244)
T ss_pred             CHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccc
Confidence            8887775532  38999999999999999999999999999999999999999999999999987653321    22345


Q ss_pred             cCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhccCCCCCCC--CCHHHHHHHH
Q 006772          213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIPSG--LPPAVENVII  289 (632)
Q Consensus       213 ~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~-~~~~ei~~~i~~~~~~p~~p~~--lp~~l~~LI~  289 (632)
                      .++..|++||.+..   ..++.++|+||||+++|+|++|..||.. .....+...+... .....+..  ++.++.+++.
T Consensus       147 ~~~~~~~~pE~~~~---~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~  222 (244)
T smart00220      147 VGTPEYMAPEVLLG---KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP-KPPFPPPEWKISPEAKDLIR  222 (244)
T ss_pred             cCCcCCCCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc-CCCCccccccCCHHHHHHHH
Confidence            67889999999863   3578899999999999999999999987 4555554443322 22211122  8899999999


Q ss_pred             HhhhcCcCCCCCHHHHHH
Q 006772          290 GCFEYDLRNRPLMADILH  307 (632)
Q Consensus       290 ~cL~~DP~~RPs~~ell~  307 (632)
                      +||..||++||++.++++
T Consensus       223 ~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      223 KLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHccCCchhccCHHHHhh
Confidence            999999999999999886

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-31  Score=250.18  Aligned_cols=250  Identities=20%  Similarity=0.312  Sum_probs=196.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hH-HHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CA-KVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~-~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .|.-.++||+|.||+||+|+++.+.+      .||+|..+....+ .. ...+++. -+++. ..|.||++++++...+.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~e------ivalkrvrlddddegvpssalrei-cllke-lkhknivrl~dvlhsdk   74 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHE------IVALKRVRLDDDDEGVPSSALREI-CLLKE-LKHKNIVRLHDVLHSDK   74 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccc------eEEEEEEeccCCCCCCcHHHHHHH-HHHHH-hhhcceeehhhhhccCc
Confidence            45667899999999999999887765      8999998754322 11 1222322 22333 47999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .+-+|+|||..+|..++... ++.++.+.++.++.|+++||.|+|+++++||||||+|.||+.+|..||+|||+++.+.-
T Consensus        75 kltlvfe~cdqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   75 KLTLVFEFCDQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             eeEEeHHHhhHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            99999999999888888765 56899999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP------  274 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p------  274 (632)
                         +-.-++..+-|.+|.+|.++.+.  .-|+...|+||.||++.|+.. |++.|.|.+..+...+|...-..|      
T Consensus       154 ---pvrcysaevvtlwyrppdvlfga--kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp  228 (292)
T KOG0662|consen  154 ---PVRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP  228 (292)
T ss_pred             ---ceEeeeceeeeeeccCcceeeee--ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence               11223344569999999999875  257889999999999999987 888899998777666655321111      


Q ss_pred             ------------CCC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 ------------CIP---------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ------------~~p---------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                  .+|         +.++..-+++++++|.-+|.+|.++++.++
T Consensus       229 s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  229 SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence                        111         122335689999999999999999988654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=1e-29  Score=283.34  Aligned_cols=265  Identities=18%  Similarity=0.197  Sum_probs=178.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCC----------CcccccEEEEEEecCCchhhHHHHHHH------------
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSAD----------DFDEYHELAVKMLLPLKEDCAKVFVNK------------   96 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~----------~~~~~~~VAIK~l~~~~~~~~~~~~~~------------   96 (632)
                      .++.++|++.++||+|+||.||+|.+...+.          .....+.||||.+........+.+.++            
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            4578999999999999999999997643221          012335799999865433222222221            


Q ss_pred             -HHHHhhhccCCCc----eeEeeEEEEE--------CCEEEEEEecCC-CCHHHHHHHhc--------------------
Q 006772           97 -FEELFPKFRESQS----VCWLHGISVI--------NGKICIAMKFYE-GSVGDRIAQQR--------------------  142 (632)
Q Consensus        97 -~~~il~~l~~h~~----I~~l~~~~~~--------~~~l~LVmEy~~-GsL~d~l~~~~--------------------  142 (632)
                       +...+.++.++++    ++.+.+++..        ++..+|||||+. |+|.+++....                    
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence             1122333333332    3444454432        356899999998 67877775321                    


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCC
Q 006772          143 --GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA  220 (632)
Q Consensus       143 --~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmA  220 (632)
                        ...+++..++.++.|++.+|.|||+++|+||||||+|||++.++.+||+|||+++......  ........+|+.|+|
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~--~~~~~~g~~tp~Y~a  378 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI--NFNPLYGMLDPRYSP  378 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC--ccCccccCCCcceeC
Confidence              1234567888999999999999999999999999999999999999999999986543211  111112234889999


Q ss_pred             ccccCCCCCC-------------------CCCcccccchhHHHHHHHHhCCC-CCCCCCHH-----------HHHHHHHh
Q 006772          221 PEQWEPEVRG-------------------PISFETDTWGFGCSIMEMLTGIQ-PWFGKSVE-----------EIYHSVVI  269 (632)
Q Consensus       221 PE~~~~~~~g-------------------~~t~ksDvwSlGvvL~EmltG~~-PF~~~~~~-----------ei~~~i~~  269 (632)
                      ||++......                   ....+.|+||+||++|+|+++.. ||.+....           ..+..+  
T Consensus       379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~--  456 (507)
T PLN03224        379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY--  456 (507)
T ss_pred             hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--
Confidence            9998532110                   11234799999999999999875 77542110           011111  


Q ss_pred             hccCCCC--CCCCCHHHHHHHHHhhhcCc---CCCCCHHHHHH
Q 006772          270 KKEKPCI--PSGLPPAVENVIIGCFEYDL---RNRPLMADILH  307 (632)
Q Consensus       270 ~~~~p~~--p~~lp~~l~~LI~~cL~~DP---~~RPs~~ell~  307 (632)
                      ......+  ....++...+|+.+||..+|   .+|+|++|+|+
T Consensus       457 ~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        457 KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            1122222  25678999999999999876   68999999886

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=3.6e-30  Score=248.11  Aligned_cols=220  Identities=24%  Similarity=0.361  Sum_probs=176.4

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      -.+..+++.-+..||+|+||.|-+-++.+++      ...|+|.+...- ....++.+.+. .+......+|+++.++|.
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg------~imAvKri~~tvn~q~q~r~L~dl-di~~r~~~CPf~V~FyGa  113 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSG------TIMAVKRIRATVNSQEQKRLLMDL-DIIMRTVDCPFTVHFYGA  113 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCC------eEEEEeeehhhcChHHHHHHHHhh-hhhccCCCCCeEEEeehh
Confidence            3455677888899999999999999988876      489999997543 33333444443 334555689999999999


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEec
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      ....+.++|.||.|.-|+..+..+.  +++.+++.-.=+++..++.||.|||++ .+||||+||+|||++.+|++|+|||
T Consensus       114 ~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDF  193 (282)
T KOG0984|consen  114 LFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDF  193 (282)
T ss_pred             hhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccc
Confidence            9899999999999998766554432  467899999999999999999999986 7999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCC-CCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHHHH
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVV  268 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g-~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~i~  268 (632)
                      |++-.+...    ...+.-.|...|||||.+..+.+. .|+-+|||||||+++.||.+++.||... ++-+.+.+++
T Consensus       194 GIsG~L~dS----iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvV  266 (282)
T KOG0984|consen  194 GISGYLVDS----IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVV  266 (282)
T ss_pred             ccceeehhh----hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHh
Confidence            998765321    111224578899999999876543 7899999999999999999999999874 4556666665

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=7.9e-32  Score=265.85  Aligned_cols=255  Identities=20%  Similarity=0.294  Sum_probs=195.0

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .+.|+-..+||+|.||+||+|+.++++      +.||+|+....+  +......+++. .++ .+..|+|++.+..+|..
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~------kkvalkkvlmeneKeGfpitalrei-kiL-~~lkHenv~nliEic~t   87 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTG------KKVALKKVLMENEKEGFPITALREI-KIL-QLLKHENVVNLIEICRT   87 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCcc------chhHHHHHHHhccccCCcHHHHHHH-HHH-HHhcchhHHHHHHHHhh
Confidence            367888899999999999999988766      478888764322  11112223332 233 33478998887766543


Q ss_pred             --------CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          120 --------NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       120 --------~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                              ...+|+|+.+|+.+|..++... ..+|++.++.+++.+++.||.|+|...|+|||+||+|+||+.+|.+||+
T Consensus        88 k~Tp~~r~r~t~ylVf~~cehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklA  166 (376)
T KOG0669|consen   88 KATPTNRDRATFYLVFDFCEHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLA  166 (376)
T ss_pred             ccCCcccccceeeeeHHHhhhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEee
Confidence                    2459999999999888777543 4689999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCC-CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGR-SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~-~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+++.+... ......++..+-|.+|.+||.+.+.  ..|+.+.|+|+.||++.||.|+.+.+.+.+..+..+.|...
T Consensus       167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~--r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~L  244 (376)
T KOG0669|consen  167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD--REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQL  244 (376)
T ss_pred             ccccccceecccccCCCCcccceeeeecCCHHHhhcc--cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHH
Confidence            99999765332 2223345556679999999999975  36889999999999999999999999998876655544311


Q ss_pred             c--------------------cCCCCC-------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 K--------------------EKPCIP-------------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~--------------------~~p~~p-------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .                    ..++.|             -.-+++..+|+.++|..||.+|+.+.++++
T Consensus       245 cGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  245 CGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             hccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            0                    001111             112357889999999999999999999886

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=291.36  Aligned_cols=243  Identities=24%  Similarity=0.289  Sum_probs=187.5

Q ss_pred             EeEEcccCceE-EEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEE
Q 006772           48 KHRIGRGPFGD-VWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIA  126 (632)
Q Consensus        48 ~~~IG~G~FG~-VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LV  126 (632)
                      .+.+|.|+-|+ ||+|.+.        +|+||||.+..    ....+..++..++.....|+||+++++.-++.+.+||+
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye--------~R~VAVKrll~----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa  581 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYE--------GREVAVKRLLE----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA  581 (903)
T ss_pred             HHHcccCCCCcEEEEEeeC--------CceehHHHHhh----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence            36788998876 4899864        36899999853    22445566667788889999999999988889999999


Q ss_pred             EecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CC--cEEEEecCCceec
Q 006772          127 MKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HD--QLVLGDFGIPYLL  199 (632)
Q Consensus       127 mEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g--~vkL~DFGlak~~  199 (632)
                      .|.|..+|.|++...  ......-.+.+..+.|++.||++||+.+||||||||+||||+.   ++  .++|+|||+++.+
T Consensus       582 lELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  582 LELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             ehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            999999999999763  1111122456788999999999999999999999999999986   33  7899999999988


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC-CCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP-CIP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p-~~p  277 (632)
                      ......-.......||-+|+|||++...   .-+.++|+|||||++|+.++ |..||......+.  .|+...... .+.
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~---~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~  736 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLRED---RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLE  736 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHhcc---ccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeec
Confidence            6654443445667899999999999865   34569999999999999999 5999976443332  233221111 111


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +....++.+||.+|++.||..||++.+++.
T Consensus       737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  737 PLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             cCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            111228999999999999999999999996

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=9.2e-31  Score=286.55  Aligned_cols=427  Identities=22%  Similarity=0.299  Sum_probs=294.9

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEec
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKF  129 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy  129 (632)
                      +|.|.||.|+++.-....   +.++.+|+|++++.... ........++.++..+..|+.++.++..++.++.++++++|
T Consensus         2 lg~g~~gkvfLvrk~~g~---da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~   78 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGA---DAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF   78 (612)
T ss_pred             CCcCCCcchHHHHHhccc---cccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence            699999999998643322   45578999998764321 11113334456667777899999999999999999999999


Q ss_pred             CCCCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCc
Q 006772          130 YEGSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD  208 (632)
Q Consensus       130 ~~GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~  208 (632)
                      ..|  ++.+.+.. ...+.+.....|...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++.......    
T Consensus        79 ~rg--g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----  152 (612)
T KOG0603|consen   79 LRG--GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----  152 (612)
T ss_pred             ccc--chhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----
Confidence            997  34444433 35678889999999999999999999999999999999999999999999999987643211    


Q ss_pred             cccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006772          209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVI  288 (632)
Q Consensus       209 ~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI  288 (632)
                         .|||..|||||++.     ....++|+||||++++||+||..||.+    ++...|.  ...+.+|..++..+++++
T Consensus       153 ---~cgt~eymApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il--~~~~~~p~~l~~~a~~~~  218 (612)
T KOG0603|consen  153 ---ACGTYEYRAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL--KAELEMPRELSAEARSLF  218 (612)
T ss_pred             ---cccchhhhhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh--hhccCCchhhhHHHHHHH
Confidence               28999999999986     356799999999999999999999988    4555554  456778999999999999


Q ss_pred             HHhhhcCcCCCCCHH-HHHHHHHhhhhcccCCCCccccccccccCCCcCCCCCCcccCcccCccCcccccCCCCCCCCCC
Q 006772          289 IGCFEYDLRNRPLMA-DILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTVRSRKPLNARKPQ  367 (632)
Q Consensus       289 ~~cL~~DP~~RPs~~-ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~~~~~  367 (632)
                      ..++.++|.+|.... +.+  .+...+.++..++|.++..+...+++.+....+    ++..+.....++..|..+    
T Consensus       219 ~~l~~r~p~nrLg~~~~~~--~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e----~~~~~fd~eft~~~P~ds----  288 (612)
T KOG0603|consen  219 RQLFKRNPENRLGAGPDGV--DEIKQHEFFQSIDWNELEARSRPPPFKPGSITE----RDVAQFDPEFTSQVPADS----  288 (612)
T ss_pred             HHHHhhCHHHHhccCcchh--HHHhccchheeeeHhhHhhcCCCCCCCCcccch----hhhhhcCchhccCCcccC----
Confidence            999999999998652 222  233347889999999999999988887754442    333333333444444432    


Q ss_pred             cccCCCCceeeccCCCCCCCcEEEecCCCCCCccCChhhHHHHhhcccCCCeEEeecCCCCCCcceeeeeeecCCceeee
Q 006772          368 TVDVPAGTVVGLDADTDRNSSVLVKIPGLHNPLRVQESSLERVTFGLAAGDWVSLKDENSRHSSVGVLHSVQRDGSVSVG  447 (632)
Q Consensus       368 ~~~~p~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~v~~g~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (632)
                          |.+...+.+ ..-+.|+++|..-           .++.                             -.+-....+
T Consensus       289 ----p~~~~~~s~-~~if~g~sfva~~-----------il~~-----------------------------~~~~~~~~~  323 (612)
T KOG0603|consen  289 ----PLLSASGSD-HTIFSGPSFVAPG-----------VLED-----------------------------AVTAPFTES  323 (612)
T ss_pred             ----CCCCCCccc-cchhcCCCccChH-----------Hhhc-----------------------------cccCCcchh
Confidence                111111111 0113344443221           1111                             011123456


Q ss_pred             eecccccccccccchhcceecccceEEEecccccCccccccccCCCccccceEEEEeeCCeEEEecCCCCcCCCCCCCCc
Q 006772          448 FIGLETLWRGNYSEIQMAKAYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPGRFPLGHGSGSSL  527 (632)
Q Consensus       448 ~~~~~~~~~g~~~~~~~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (632)
                      |...+.++.|+||.|+.|++..++|..++|  +.+=|      ....+.-..|+      .++.+-|+......+    .
T Consensus       324 y~~~~~~~~gs~s~~~~~~~~~t~~~~~vk--ii~~~------~~~~~~e~~~~------~~~~~h~niv~~~~v----~  385 (612)
T KOG0603|consen  324 YEFREELGEGSFSAVKYCESSPTDQEPAVK--IISKR------ADDNQDEIPIS------LLVRDHPNIVKSHDV----Y  385 (612)
T ss_pred             hccccccCCCCccceeeeeccccccchhhe--ecccc------ccccccccchh------hhhcCCCcceeecce----e
Confidence            777888999999999999999999999999  55544      33344444443      234444444433322    3


Q ss_pred             CCCCceeEEEecCCch------hhhhhcc-ccccccchhhHHHHHHHHHHHhhheee
Q 006772          528 ADPSEVELVSFDTCPG------VVEKYKH-IEDYHWSVRPLAIALGLFAAMKLGWLV  577 (632)
Q Consensus       528 ~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  577 (632)
                      -|.-++=+|. .++.|      +++||+- .|.-||+ +=|++|+=.|=+  -|++-
T Consensus       386 ~~~~~~~~v~-e~l~g~ell~ri~~~~~~~~e~~~w~-~~lv~Av~~LH~--~gvvh  438 (612)
T KOG0603|consen  386 EDGKEIYLVM-ELLDGGELLRRIRSKPEFCSEASQWA-AELVSAVDYLHE--QGVVH  438 (612)
T ss_pred             cCCceeeeee-hhccccHHHHHHHhcchhHHHHHHHH-HHHHHHHHHHHh--cCeee
Confidence            3444444443 34443      3444433 4555776 557777777766  56655

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=9.7e-29  Score=256.22  Aligned_cols=266  Identities=15%  Similarity=0.256  Sum_probs=208.5

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +..+++++...+-+|.||.||.|.++... ++...+.|-+|.++..... ....++.+.  ++..-.+|+|+..+.+++.
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEd-t~n~~q~v~vKTvk~~AS~iQv~~~L~es--~lly~~sH~nll~V~~V~i  357 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREED-TYNDCQEVLVKTVKQHASQIQVNLLLQES--MLLYGASHPNLLSVLGVSI  357 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccC-CcchHHHHHHHHHHhcccHHHHHHHHHHH--HHHhcCcCCCccceeEEEe
Confidence            56678999999999999999999887533 2344456777777543322 222222322  2223346999999988876


Q ss_pred             EC-CEEEEEEecCC-CCHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          119 IN-GKICIAMKFYE-GSVGDRIAQQR------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       119 ~~-~~l~LVmEy~~-GsL~d~l~~~~------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      .+ ...++++.++. |+|..++..-+      .+.++-.+...++.|++.|++|||+++|||.||..+|++||+.-++||
T Consensus       358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence            54 66788888888 78777766322      145677788899999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~  269 (632)
                      +|=.+++-+...++..-. ....-...||+||.+..+   .|+.++|+||||++||||+| |+.||..-++.++.+.+. 
T Consensus       438 tDsaLSRDLFP~DYhcLG-DnEnRPvkWMslEal~n~---~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk-  512 (563)
T KOG1024|consen  438 TDSALSRDLFPGDYHCLG-DNENRPVKWMSLEALQNS---HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK-  512 (563)
T ss_pred             ccchhccccCcccccccC-CCCCCcccccCHHHHhhh---hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh-
Confidence            999999876554332110 112236789999999744   78999999999999999999 999999999999988776 


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ++.+...|-+||+++..+|.-||+.+|++||+++++..-|.+..
T Consensus       513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            45667789999999999999999999999999999998876543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.96  E-value=3.5e-29  Score=244.32  Aligned_cols=248  Identities=17%  Similarity=0.356  Sum_probs=193.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      |=+.++|++.+++|+|.|++|+.|.+..+++      .++||++++.+...    +.++..++..+..++||+.+.++..
T Consensus        34 wg~~ddYeivrk~GRGKYSEVFeg~~~~~~e------K~ViKiLKPVkkkK----IkREikIL~nL~gg~NIi~L~DiV~  103 (338)
T KOG0668|consen   34 WGNQDDYEIVRKVGRGKYSEVFEGINITNNE------KCVIKILKPVKKKK----IKREIKILQNLRGGPNIIKLLDIVK  103 (338)
T ss_pred             ccccchHHHHHHHcCccHhhHhcccccCCCc------eEEEeeechHHHHH----HHHHHHHHHhccCCCCeeehhhhhc
Confidence            4356899999999999999999999877665      89999998865432    3444567788889999999998876


Q ss_pred             EC--CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEecCC
Q 006772          119 IN--GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGDFGI  195 (632)
Q Consensus       119 ~~--~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~DFGl  195 (632)
                      +.  ....|+.||++......+.    ..++..+++.|+.+++.||.|+||+||+|||+||.|++||. .-..+|+|+|+
T Consensus       104 Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGL  179 (338)
T KOG0668|consen  104 DPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGL  179 (338)
T ss_pred             CccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecch
Confidence            53  4577999999975555553    26888999999999999999999999999999999999995 45799999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC-CC-HHHHHHHHH-----
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KS-VEEIYHSVV-----  268 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~-~~-~~ei~~~i~-----  268 (632)
                      |.++-..    ......+.+..|.-||.+..  ...|+..-|+|||||+|..|+..+.||.. .+ .+++. .|.     
T Consensus       180 AEFYHp~----~eYnVRVASRyfKGPELLVd--y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLV-kIakVLGt  252 (338)
T KOG0668|consen  180 AEFYHPG----KEYNVRVASRYFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV-KIAKVLGT  252 (338)
T ss_pred             HhhcCCC----ceeeeeeehhhcCCchheee--chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHH-HHHHHhCh
Confidence            9876432    23344566889999999874  34578899999999999999999999764 33 33321 111     


Q ss_pred             ----------------------hhccCCCC----C----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 ----------------------IKKEKPCI----P----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ----------------------~~~~~p~~----p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                            ....+...    +    .-.++++.+|+.++|.+|-.+|+|+.|.+.
T Consensus       253 ~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  253 DELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence                                  01111100    0    123589999999999999999999999775

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.3e-27  Score=248.63  Aligned_cols=159  Identities=22%  Similarity=0.348  Sum_probs=125.5

Q ss_pred             cccccCCCccccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHH
Q 006772           16 YELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN   95 (632)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~   95 (632)
                      +.-.+++|+.++.===+|+.++..+...+|.+.++||=|.|++||||.+.+..      +.||+|+.+..... .+..+.
T Consensus        51 ~~~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~------r~VAlKVvKSAqhY-tEaAlD  123 (590)
T KOG1290|consen   51 DDEEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNK------RYVALKVVKSAQHY-TEAALD  123 (590)
T ss_pred             CcccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCC------eEEEEEEEehhhHH-HHHHHH
Confidence            33344555544444455888888888899999999999999999999998866      59999998643221 122222


Q ss_pred             HHHHHhhhccC-------CCceeEeeEEEEE----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 006772           96 KFEELFPKFRE-------SQSVCWLHGISVI----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD  164 (632)
Q Consensus        96 ~~~~il~~l~~-------h~~I~~l~~~~~~----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~y  164 (632)
                      +. .++++++.       ..+|+.|++.|..    +.++|+|+|++.-+|+.+|.....+.+++.-++.|+.||+.||.|
T Consensus       124 EI-klL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdY  202 (590)
T KOG1290|consen  124 EI-KLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDY  202 (590)
T ss_pred             HH-HHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence            22 34444432       2468999988875    357999999999999999998877899999999999999999999


Q ss_pred             HHhC-CceeeeeeCCeEEE
Q 006772          165 LHSI-GLLVLNLKPSNLLL  182 (632)
Q Consensus       165 LHs~-~IvHRDLKP~NILl  182 (632)
                      ||.+ ||||-||||+|||+
T Consensus       203 LH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  203 LHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             HHHhcCccccCCCcceeee
Confidence            9985 89999999999999

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=5e-29  Score=272.21  Aligned_cols=253  Identities=22%  Similarity=0.333  Sum_probs=202.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++..++|.|+||+||+|+++.+++      ..|+|+++....+......+++ .++..+ +|+||+-+++.+...+
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~e------laavkvVkLep~dd~~~iqqei-~~~~dc-~h~nivay~gsylr~d   85 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGE------LAAVKVVKLEPGDDFSGIQQEI-GMLRDC-RHPNIVAYFGSYLRRD   85 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCc------hhhheeeeccCCccccccccce-eeeecC-CCcChHHHHhhhhhhc
Confidence            3789999999999999999999998775      7899999876655544433332 233333 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .++|.||||.|+.++-+.+. -+++++.++....++.+.||+|||+.+-+|||||-.|||+++.|.+||+|||.+..+..
T Consensus        86 klwicMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita  164 (829)
T KOG0576|consen   86 KLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA  164 (829)
T ss_pred             CcEEEEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh
Confidence            99999999996444444433 36899999999999999999999999999999999999999999999999998765432


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH-hhccCCC--CCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV-IKKEKPC--IPS  278 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~-~~~~~p~--~p~  278 (632)
                      . .  .....++||++|||||+..-+..+.|...+|+|++|+...|+..-++|-+..-+.+...... ....+|.  -+.
T Consensus       165 t-i--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~  241 (829)
T KOG0576|consen  165 T-I--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKT  241 (829)
T ss_pred             h-h--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCc
Confidence            1 1  12245789999999999876678899999999999999999999899977766555433332 2222222  235


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                      .+++.+.+|++.||.++|.+||+++.++
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhhe
Confidence            6889999999999999999999987654

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=2.5e-28  Score=263.08  Aligned_cols=202  Identities=19%  Similarity=0.307  Sum_probs=166.3

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh---HH----HHHHHHHHHhhhc--cCCCcee
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC---AK----VFVNKFEELFPKF--RESQSVC  111 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~---~~----~~~~~~~~il~~l--~~h~~I~  111 (632)
                      ...+|..++.+|+|+||.|++|.++..+      .+|+||++.+...-.   .+    --.-.+.+++..+  ..|+||+
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~------~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIl  632 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENN------YEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENIL  632 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccc------eEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchh
Confidence            4478999999999999999999998765      489999997743210   00    0011233444444  3589999


Q ss_pred             EeeEEEEECCEEEEEEecCC-C-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEE
Q 006772          112 WLHGISVINGKICIAMKFYE-G-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~-G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vk  189 (632)
                      ++.++|++++++||+||-.. | +|.+++...  ..+++.++..++.|++.|+++||+.||||||||-+|+.++.+|.+|
T Consensus       633 KlLdfFEddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~k  710 (772)
T KOG1152|consen  633 KLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVK  710 (772)
T ss_pred             hhhheeecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEE
Confidence            99999999999999999986 5 788888654  4899999999999999999999999999999999999999999999


Q ss_pred             EEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC
Q 006772          190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG  257 (632)
Q Consensus       190 L~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~  257 (632)
                      |+|||.|...     .......+.||..|.|||++.++.+  .....|||++|++||-+...+.||+.
T Consensus       711 lidfgsaa~~-----ksgpfd~f~gtv~~aapevl~g~~y--~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  711 LIDFGSAAYT-----KSGPFDVFVGTVDYAAPEVLGGEKY--LGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             Eeeccchhhh-----cCCCcceeeeeccccchhhhCCCcc--CCCcchhhhhhheeeEEEeccCCCcC
Confidence            9999987654     2334456789999999999987743  35789999999999999999999864

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=5.9e-28  Score=257.33  Aligned_cols=249  Identities=21%  Similarity=0.317  Sum_probs=190.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccC-----CCceeEeeEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE-----SQSVCWLHGIS  117 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~-----h~~I~~l~~~~  117 (632)
                      .+|.+....|+|-|++|-.|.+...+      ..||||++..-..  +...-..+.+++.++..     .-|++.|+..|
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~------~~vAiKIIRnNE~--M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F  503 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARG------QEVAIKIIRNNEV--MHKTGLKELEILKKLNDADPEDKFHCLRLFRHF  503 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCC------CeeEEEEeecchH--HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh
Confidence            56888899999999999999887654      4899999975321  12222223345555532     23567777778


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCC
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGI  195 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGl  195 (632)
                      ...+++|||+|.+.-+|.+.+.... +-.|.+..++.|+.|+..||..|-..||+|.||||.|||+++.. .+||||||.
T Consensus       504 ~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS  583 (752)
T KOG0670|consen  504 KHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS  583 (752)
T ss_pred             hhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence            8889999999999999998887652 35688899999999999999999999999999999999999754 679999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--  273 (632)
                      |......     ..+.++-+..|.|||++.+.   +|+...|+||.||+|||+.||+..|.|.+..+++...+....+  
T Consensus       584 A~~~~en-----eitPYLVSRFYRaPEIiLG~---~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p  655 (752)
T KOG0670|consen  584 ASFASEN-----EITPYLVSRFYRAPEIILGL---PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP  655 (752)
T ss_pred             ccccccc-----cccHHHHHHhccCcceeecC---cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence            8765432     22233446789999999865   7899999999999999999999999999877765544311000  


Q ss_pred             -----------------------------------------C------------CCCCC---CCHHHHHHHHHhhhcCcC
Q 006772          274 -----------------------------------------P------------CIPSG---LPPAVENVIIGCFEYDLR  297 (632)
Q Consensus       274 -----------------------------------------p------------~~p~~---lp~~l~~LI~~cL~~DP~  297 (632)
                                                               |            .+|..   .-.++.+|+.+||..||+
T Consensus       656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~  735 (752)
T KOG0670|consen  656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE  735 (752)
T ss_pred             HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence                                                     0            01110   012688999999999999


Q ss_pred             CCCCHHHHHH
Q 006772          298 NRPLMADILH  307 (632)
Q Consensus       298 ~RPs~~ell~  307 (632)
                      +|.+..+.|.
T Consensus       736 KRit~nqAL~  745 (752)
T KOG0670|consen  736 KRITVNQALK  745 (752)
T ss_pred             hcCCHHHHhc
Confidence            9999998665

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=5.1e-26  Score=218.76  Aligned_cols=212  Identities=30%  Similarity=0.518  Sum_probs=170.8

Q ss_pred             EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecC
Q 006772           51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY  130 (632)
Q Consensus        51 IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~  130 (632)
                      ||+|++|.||++.+..++      +.+++|++.............++...+..+ .|++++.+++++......+++|||+
T Consensus         1 l~~g~~~~v~~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~   73 (215)
T cd00180           1 LGEGGFGTVYLARDKKTG------KKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYC   73 (215)
T ss_pred             CCcCCceEEEEEEecCCC------cEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecC
Confidence            689999999999986544      489999997654321122233333445555 4599999999999889999999999


Q ss_pred             C-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEecCCceeccCCCCCCCc
Q 006772          131 E-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGDFGIPYLLLGRSLSDSD  208 (632)
Q Consensus       131 ~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~DFGlak~~~~~~~~~~~  208 (632)
                      . ++|.+++.... ..+++..++.++.+++.+|.+||+++++|+||+|.||+++. ++.++|+|||.+........   .
T Consensus        74 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~  149 (215)
T cd00180          74 EGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---L  149 (215)
T ss_pred             CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---h
Confidence            9 67777765432 46899999999999999999999999999999999999999 89999999999876533211   1


Q ss_pred             cccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006772          209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVI  288 (632)
Q Consensus       209 ~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI  288 (632)
                      .....+...|++||.+...  ..++.++|+|++|+++++|                                 ..+.+++
T Consensus       150 ~~~~~~~~~~~~pe~~~~~--~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l  194 (215)
T cd00180         150 LKTIVGTPAYMAPEVLLGK--GYYSEKSDIWSLGVILYEL---------------------------------PELKDLI  194 (215)
T ss_pred             hhcccCCCCccChhHhccc--CCCCchhhhHHHHHHHHHH---------------------------------HHHHHHH
Confidence            2234578899999998642  2567899999999999999                                 6799999


Q ss_pred             HHhhhcCcCCCCCHHHHHHH
Q 006772          289 IGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       289 ~~cL~~DP~~RPs~~ell~~  308 (632)
                      .+|++.||.+||++.++++.
T Consensus       195 ~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         195 RKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHhhCCcccCcCHHHHhhC
Confidence            99999999999999998863

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.94  E-value=1.2e-25  Score=221.25  Aligned_cols=211  Identities=26%  Similarity=0.424  Sum_probs=166.7

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      |.+.+.||.|+||.||++.+..++      ..+|+|.+...... ....+.++ ...+..+ .|++++.+.+.+......
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~e-~~~~~~~-~~~~i~~~~~~~~~~~~~   72 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTG------ELVAVKVLKKEKTEKQREEFLRE-IRILKKL-KHPNIVKLYGVFEDPEPL   72 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCC------cEEEEEeeccccchHHHHHHHHH-HHHHHhC-CCCChhhheeeeecCCce
Confidence            578899999999999999987644      48999999764433 23333333 3344454 689999999998888999


Q ss_pred             EEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          124 CIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       124 ~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      ++++||+.+ +|.+.+.... ..+++..+..++.+++.+|.+||+++++|+||+|.||+++.++.++|+|||++......
T Consensus        73 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       73 YLVMEYCEGGDLFDYLRKKG-GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             EEEEeccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            999999996 8888776542 12899999999999999999999999999999999999999999999999998875432


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC-CCH-HHHHHHHH
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSV-EEIYHSVV  268 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~-~~~-~ei~~~i~  268 (632)
                      .  ........++..|++||.+.  ....++.++|+||||++++||++|+.||.. .+. .++...+.
T Consensus       152 ~--~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      152 L--AALLKTVKGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             c--cccccceeccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence            1  01223346788999999984  234677899999999999999999999987 444 45555544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.9e-28  Score=242.79  Aligned_cols=250  Identities=20%  Similarity=0.275  Sum_probs=184.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      +.+--+.||-|.||.||-+++..++      +.||+|++...-  -...+.++++... + ..-+|.|+....++.+.. 
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdg------rrvalkK~pnvfq~L~s~krvFre~km-L-cfFkHdNVLSaLDILQPph  125 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSG------KRVALKKMPNVFQNLASCKRVFREIKM-L-SSFRHDNVLSLLDILQPAN  125 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCc------cchhHhhcchHHHHHHHHHHHHHHHHH-H-HhhccccHHHHHHhcCCCC
Confidence            4445578999999999999876544      689999986432  1222333443322 2 234678877766665543 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          121 ----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       121 ----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                          ..+|+++|+|..+|...+..  ...++...+.-+..||++||.|||+.+|+||||||.|.|++.|...||||||++
T Consensus       126 ~dfFqEiYV~TELmQSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLA  203 (449)
T KOG0664|consen  126 PSFFQELYVLTELMQSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLA  203 (449)
T ss_pred             chHHHHHHHHHHHHHhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccc
Confidence                34778899998887777653  357888999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-----
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-----  271 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-----  271 (632)
                      +.-..+  ....++..+-|.+|.|||++++..  .|+.+.||||.||++.|++..+..|...++-+.++.|...-     
T Consensus       204 Rvee~d--~~~hMTqEVVTQYYRAPEiLMGaR--hYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~  279 (449)
T KOG0664|consen  204 RTWDQR--DRLNMTHEVVTQYYRAPELLMGAR--RYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ  279 (449)
T ss_pred             cccchh--hhhhhHHHHHHHHhccHHHhhcch--hhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence            864322  222334445688999999999863  58999999999999999999999998877665544443111     


Q ss_pred             -------------------cCCCCC--------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 -------------------EKPCIP--------SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 -------------------~~p~~p--------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                         ..|.++        ..-..+...++.++|..||++|.+.++.+.
T Consensus       280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~  342 (449)
T KOG0664|consen  280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ  342 (449)
T ss_pred             HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence                               111111        112236677889999999999999888665

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.7e-27  Score=234.35  Aligned_cols=253  Identities=21%  Similarity=0.310  Sum_probs=186.9

Q ss_pred             CCCcCC-CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEe-e
Q 006772           37 RPWIDP-TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWL-H  114 (632)
Q Consensus        37 ~~~I~~-~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l-~  114 (632)
                      -+.|+. +.|.+.+.||+|.||.+-|++|++++.      .+++|.++... ....+|.+++.--+ .+.+|.||+.- .
T Consensus        17 l~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t------~ivlKavp~p~-tt~~dF~rEfhY~~-~Ls~H~hIi~tY~   88 (378)
T KOG1345|consen   17 LKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKT------RIVLKAVPRPQ-TTQADFVREFHYSF-FLSPHQHIIDTYE   88 (378)
T ss_pred             ccccchhhhhhHHHHhcccceeeEEeeeccCCce------EEEeeccCcch-hhHHHHHHHhccce-eeccchhhhHHHH
Confidence            345555 789999999999999999999998874      89999886533 44577777775443 34566676654 4


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec--CCcEEEE
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE--HDQLVLG  191 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~--~g~vkL~  191 (632)
                      ..|++.+.++++|||++ |+|..-+..   ..+-+.-..+++.|++.||+|+|++++||||||.+||||-.  ..++|||
T Consensus        89 vaFqt~d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlc  165 (378)
T KOG1345|consen   89 VAFQTSDAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLC  165 (378)
T ss_pred             HHhhcCceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEee
Confidence            55788889999999999 777665532   46778888999999999999999999999999999999953  3489999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCC--CCcccccchhHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP--ISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-IYHSVV  268 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~--~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e-i~~~i~  268 (632)
                      |||+++....      ......-+..|-+||.+.....+.  ..+.+|+|.||+++|.++||..||......+ -+....
T Consensus       166 DFG~t~k~g~------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~  239 (378)
T KOG1345|consen  166 DFGLTRKVGT------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE  239 (378)
T ss_pred             ecccccccCc------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence            9998765321      111122366899999876433333  4678999999999999999999998643221 111111


Q ss_pred             --hhccCCCCC---CCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          269 --IKKEKPCIP---SGLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       269 --~~~~~p~~p---~~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                        .+...+..|   ..+++.+..+.++-|..+|++|--..+..
T Consensus       240 ~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~k  282 (378)
T KOG1345|consen  240 QWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAK  282 (378)
T ss_pred             HHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHH
Confidence              123333444   45788999999999999999995444433

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=9.6e-26  Score=230.37  Aligned_cols=279  Identities=17%  Similarity=0.248  Sum_probs=220.6

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      +..|-.-.|+++++||+|+||.+++|.+.-+++      .||||.-...++...   ++.+...++.+...+.|...+.+
T Consensus        22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne------~VAIKfEPrkS~APQ---LrdEYr~YKlL~g~~GIP~vYYF   92 (449)
T KOG1165|consen   22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNE------PVAIKFEPRKSEAPQ---LRDEYRTYKLLGGTEGIPQVYYF   92 (449)
T ss_pred             CceEecccceeccccccCcceeeecccccccCc------eEEEEeccccCCcch---HHHHHHHHHHHcCCCCCCceeee
Confidence            334555679999999999999999999887764      899998765443322   22223445556678899999988


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-----cEEEE
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-----QLVLG  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-----~vkL~  191 (632)
                      ..++-+..||||++.-||.|++. ..+++|+..+++.+|.|++.-++|+|++.+|+|||||+|+||..-+     .+.++
T Consensus        93 GqeG~~NiLVidLLGPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~Ihii  171 (449)
T KOG1165|consen   93 GQEGKYNILVIDLLGPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHII  171 (449)
T ss_pred             ccccchhhhhhhhhCcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEE
Confidence            88888889999999999888875 4678999999999999999999999999999999999999998544     68999


Q ss_pred             ecCCceeccCCC----CCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---CHHHHH
Q 006772          192 DFGIPYLLLGRS----LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---SVEEIY  264 (632)
Q Consensus       192 DFGlak~~~~~~----~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---~~~ei~  264 (632)
                      |||+|+.+....    ++.....+..||.+||+-....+.   .-+.+.|+-|||-++.+.|.|..||.|.   +..+.+
T Consensus       172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGr---EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY  248 (449)
T KOG1165|consen  172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY  248 (449)
T ss_pred             eccchhhhcCccccccCccccccccccceeeeEeeccccc---hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH
Confidence            999999874332    223334556899999999998865   5678999999999999999999999984   456677


Q ss_pred             HHHHhhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc----cCCCCccccccc
Q 006772          265 HSVVIKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV----YNDGEWTGLGSR  328 (632)
Q Consensus       265 ~~i~~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~----~~~~~w~~~~~~  328 (632)
                      +.|-..+...+   +..++|.++...+.-.-..+..+-|..+.+...|.++....    ....||..+...
T Consensus       249 eKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln~g  319 (449)
T KOG1165|consen  249 EKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLNNG  319 (449)
T ss_pred             HHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccCCC
Confidence            77654433332   22678999999999999999999999998887777665542    234577766543

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-26  Score=236.68  Aligned_cols=247  Identities=21%  Similarity=0.239  Sum_probs=188.3

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC--chhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~--~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      -+.+|.-++.+|.|.- .|-.|.+.-..      +.||+|.+...  .....+...++  ..+.....|+|++.++.+++
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~------~~v~ikk~~~pf~n~~~akra~re--l~l~~~v~~~nii~l~n~ft   85 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLG------RPVAIKKLSRPFQNQTHAKRAYRE--LKLMKCVNHKNIISLLNVFT   85 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhcc------CceehhhhcCccccCccchhhhhh--hhhhhhhcccceeeeeeccC
Confidence            3567888899999887 66667665443      58999987542  12222222232  22345568999999999987


Q ss_pred             EC------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          119 IN------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       119 ~~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      -.      ..+|+|||||.+++.+.+..    .++-.++..+..|++.|++|||+.+|+||||||+||++..++.+||.|
T Consensus        86 P~~~l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~d  161 (369)
T KOG0665|consen   86 PQKTLEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILD  161 (369)
T ss_pred             ccccHHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeecc
Confidence            54      35899999999999988863    467788999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+|+.....    -.++..+.|..|.|||++.+.   .|.+.+||||+||++.||++|...|.|.+.-+.+.++...-.
T Consensus       162 fg~ar~e~~~----~~mtpyVvtRyyrapevil~~---~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lg  234 (369)
T KOG0665|consen  162 FGLARTEDTD----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLG  234 (369)
T ss_pred             chhhcccCcc----cccCchhheeeccCchheecc---CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhc
Confidence            9999764322    234456779999999999854   488999999999999999999999998775544443331100


Q ss_pred             C--------------------C---------CCCC-----------CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 K--------------------P---------CIPS-----------GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~--------------------p---------~~p~-----------~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .                    +         .+|.           .-...+++++.+||..||++|.++.++|.
T Consensus       235 tpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  235 TPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             CCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            0                    0         1111           11236789999999999999999999886

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=4.2e-25  Score=234.39  Aligned_cols=261  Identities=20%  Similarity=0.246  Sum_probs=197.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc---CCCceeEeeEEE-EE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR---ESQSVCWLHGIS-VI  119 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~---~h~~I~~l~~~~-~~  119 (632)
                      +|++.++||+|+||.||++.+....     ...+|+|+.......... .+..+..++..+.   ...+++.+...+ ..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~-----~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~   92 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK-----NKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRST   92 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC-----CeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCC
Confidence            8999999999999999999987653     247999988654322211 2222233333333   456888888888 57


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC-----CcEEEEecC
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-----DQLVLGDFG  194 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~-----g~vkL~DFG  194 (632)
                      +...||||+.+.-+|.++......+.|+..+++.++.|++.+|++||+.|++||||||+|++++..     ..+.|.|||
T Consensus        93 ~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG  172 (322)
T KOG1164|consen   93 EDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG  172 (322)
T ss_pred             CceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence            788999999999999998876666899999999999999999999999999999999999999865     368999999


Q ss_pred             Cce--eccCCC----CCCCc-cccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          195 IPY--LLLGRS----LSDSD-MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       195 lak--~~~~~~----~~~~~-~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      +++  .+....    ..... ...+.||..|+++..+.+.   ..+.+.|+||++.++.|++.|..||.+.........+
T Consensus       173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~---e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~  249 (322)
T KOG1164|consen  173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI---EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF  249 (322)
T ss_pred             CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC---ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence            998  432221    11111 2345699999999998754   5778999999999999999999999876532212222


Q ss_pred             HhhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          268 VIKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       268 ~~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ........   .....+.++.++...+-..+...+|....+...|+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~  298 (322)
T KOG1164|consen  250 EKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF  298 (322)
T ss_pred             HHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence            11111111   33456788999999888899999999999988776654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=8.3e-26  Score=222.29  Aligned_cols=278  Identities=19%  Similarity=0.253  Sum_probs=215.3

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|-...|+++++||+|+||++|+|....+++      .||||+-........   +..+..+...+++...|+.+..++.
T Consensus        11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge------~VAiK~Es~~a~hpq---L~yEskvY~iL~~g~GiP~i~~y~~   81 (341)
T KOG1163|consen   11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGE------EVAIKLESSKAKHPQ---LLYESKVYRILQGGVGIPHIRHYGT   81 (341)
T ss_pred             heeccceEEEEeecCCchhheeeeeeccCCc------eEEEEeecccCCCcc---hhHHHHHHHHhccCCCCchhhhhcc
Confidence            3556789999999999999999999987775      899999765443332   2333455556667777777777888


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC---CcEEEEecCC
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH---DQLVLGDFGI  195 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~---g~vkL~DFGl  195 (632)
                      ..++..+||+.+.-||.+++.. ..+.|+..+++.++-|++.-++|+|.+++|||||||+|+|+.-+   ..+.|+|||+
T Consensus        82 e~~ynvlVMdLLGPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL  160 (341)
T KOG1163|consen   82 EKDYNVLVMDLLGPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL  160 (341)
T ss_pred             ccccceeeeeccCccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccc
Confidence            8888999999999998888764 45689999999999999999999999999999999999999743   4688999999


Q ss_pred             ceeccCC----CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH---HHHHHHHH
Q 006772          196 PYLLLGR----SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV---EEIYHSVV  268 (632)
Q Consensus       196 ak~~~~~----~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~---~ei~~~i~  268 (632)
                      |+.+-..    ..+........||.+|.+-....+.   ..+.+.|+-|+|.+|.++..|..||.+...   .+.++.|.
T Consensus       161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~---eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~  237 (341)
T KOG1163|consen  161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI---EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS  237 (341)
T ss_pred             hhhhccccccccCccccCCccceeeeehhhhhhhhh---hhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH
Confidence            9876322    2222333456799999998877643   356789999999999999999999998643   34566665


Q ss_pred             hhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc----cCCCCcccccccc
Q 006772          269 IKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV----YNDGEWTGLGSRA  329 (632)
Q Consensus       269 ~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~----~~~~~w~~~~~~~  329 (632)
                      ..+...+   ...+.|.++.-.+.-|-..-.++-|....|...|..+.+..    .--.||+.+..+.
T Consensus       238 EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkqk~  305 (341)
T KOG1163|consen  238 EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQKS  305 (341)
T ss_pred             HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHHHh
Confidence            4433322   23688999999999999999999999988877666655432    1235788766443

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.93  E-value=2.9e-26  Score=240.91  Aligned_cols=258  Identities=23%  Similarity=0.359  Sum_probs=191.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|..+++||+|.|+.||+|.+....   ...+.||+|.+...+..  .. ...+.+++..+..+.||..+.+++..++.
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~---~~~~~valk~i~~ts~p--~r-i~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQD---TKRRYVALKAIYRTSSP--SR-ILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhc---cccceEeeeecccccCc--hH-HHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            57999999999999999999886521   23368999999765432  22 33444667778899999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-cCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-EHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-~~g~vkL~DFGlak~~~~  201 (632)
                      +++||||++..-..-+..    .++..++..|+..++.||.++|++|||||||||+|+|.+ ..+.-.|.|||+|.....
T Consensus       110 v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~  185 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG  185 (418)
T ss_pred             eEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence            999999999633333332    578999999999999999999999999999999999998 457889999999872110


Q ss_pred             C-------C----------------------------------CCCCccccccCCCccCCccccCCCCCCCCCcccccch
Q 006772          202 R-------S----------------------------------LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG  240 (632)
Q Consensus       202 ~-------~----------------------------------~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwS  240 (632)
                      .       .                                  ..........||++|.|||++..  .+..+.++|+||
T Consensus       186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k--~~~QttaiDiws  263 (418)
T KOG1167|consen  186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR--CPRQTTAIDIWS  263 (418)
T ss_pred             hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh--ccCcCCccceee
Confidence            0       0                                  00011123579999999999973  345688999999


Q ss_pred             hHHHHHHHHhCCCCCCCCCHH--HHHHHHH------------hhcc------------------------CCC-------
Q 006772          241 FGCSIMEMLTGIQPWFGKSVE--EIYHSVV------------IKKE------------------------KPC-------  275 (632)
Q Consensus       241 lGvvL~EmltG~~PF~~~~~~--ei~~~i~------------~~~~------------------------~p~-------  275 (632)
                      .|+++.-++++..||.....+  .+.+.+.            ..+.                        ...       
T Consensus       264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n  343 (418)
T KOG1167|consen  264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN  343 (418)
T ss_pred             ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence            999999999999999764321  1111000            0000                        000       


Q ss_pred             -----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccC
Q 006772          276 -----IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN  318 (632)
Q Consensus       276 -----~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~  318 (632)
                           ..+..|..+.+|+.+||+.||.+|.++++.|+      ++||.
T Consensus       344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk------HpFF~  385 (418)
T KOG1167|consen  344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK------HPFFD  385 (418)
T ss_pred             eeeccccccccHHHHHHHHHHccCChhhcccHHHHhc------CcCCc
Confidence                 00223458899999999999999999999775      66664

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.93  E-value=1.6e-25  Score=214.86  Aligned_cols=161  Identities=18%  Similarity=0.197  Sum_probs=126.0

Q ss_pred             CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCcccc
Q 006772          132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL  211 (632)
Q Consensus       132 GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~  211 (632)
                      |+|.+++... +..+++.+++.++.|++.||+|||+++      ||+|||++.++.+|+  ||+++.....        .
T Consensus         1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--------~   63 (176)
T smart00750        1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE--------Q   63 (176)
T ss_pred             CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc--------c
Confidence            6888888653 457999999999999999999999998      999999999999999  9998765321        1


Q ss_pred             ccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhccCC-----CCCCCCCH--H
Q 006772          212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIKKEKP-----CIPSGLPP--A  283 (632)
Q Consensus       212 ~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~~~~p-----~~p~~lp~--~  283 (632)
                      ..||+.|||||++.+   ..++.++|||||||++|||++|+.||..... ......+.......     ..+...+.  +
T Consensus        64 ~~g~~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (176)
T smart00750       64 SRVDPYFMAPEVIQG---QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARS  140 (176)
T ss_pred             CCCcccccChHHhcC---CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhh
Confidence            258999999999974   3688999999999999999999999976543 22333332211111     01122333  6


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          284 VENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      +.++|.+||+.||.+||++.++++.+...
T Consensus       141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      141 FADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            99999999999999999999999866543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=2.5e-26  Score=271.19  Aligned_cols=180  Identities=17%  Similarity=0.163  Sum_probs=131.1

Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC--------------
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD--------------  186 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g--------------  186 (632)
                      ..++++|||++++|.+++... ...+++.+++.++.||+.||+|||++||+||||||+||||+..|              
T Consensus        53 ~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~  131 (793)
T PLN00181         53 DSIVRALECEDVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG  131 (793)
T ss_pred             chhhhhhccCCccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence            457788999999999988643 35699999999999999999999999999999999999996544              


Q ss_pred             -----cEEEEecCCceeccCCCC------C-------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHH
Q 006772          187 -----QLVLGDFGIPYLLLGRSL------S-------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM  248 (632)
Q Consensus       187 -----~vkL~DFGlak~~~~~~~------~-------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Em  248 (632)
                           .+|++|||+++.......      .       .......+||+.|||||++.+   ..++.++|||||||+||||
T Consensus       132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~sDVwSlGviL~EL  208 (793)
T PLN00181        132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG---SSSNCASDVYRLGVLLFEL  208 (793)
T ss_pred             ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc---CCCCchhhhhhHHHHHHHH
Confidence                 455666666543211000      0       000112468999999999874   3688999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       249 ltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++|..|+.....  ....+... ..+.......+...+++.+||+.||.+||++.|+++
T Consensus       209 l~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        209 FCPVSSREEKSR--TMSSLRHR-VLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             hhCCCchhhHHH--HHHHHHHh-hcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            999988754321  11122111 112111223456778999999999999999999874

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.91  E-value=2.4e-22  Score=203.12  Aligned_cols=253  Identities=24%  Similarity=0.381  Sum_probs=189.4

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh---HHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC---AKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      |.+.+.||.|+||.||++.+.         ..+++|.+.+.....   ...+.+ +..++..+.+++++..+...+....
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~~i~~~~~~~~~~~   71 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---------KLVALKVLAKKLESKSKEVERFLR-EIQILASLNHPPNIVKLYDFFQDEG   71 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---------cEEEEEeechhhccchhHHHHHHH-HHHHHHHccCCcceeeEEEEEecCC
Confidence            788999999999999999876         378999987644332   233333 3345666766668999999987777


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCcee
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGlak~  198 (632)
                      ..+++++|+.| ++.+.+..... ..++......++.|++.++.|+|+.+++||||||+|||++..+ .++++|||+++.
T Consensus        72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~  151 (384)
T COG0515          72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKL  151 (384)
T ss_pred             EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence            88999999996 45533332211 2689999999999999999999999999999999999999988 799999999985


Q ss_pred             ccCCCCCCC---ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhhc
Q 006772          199 LLGRSLSDS---DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVIKK  271 (632)
Q Consensus       199 ~~~~~~~~~---~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~~~  271 (632)
                      .........   ......||..|++||.+.+.....++...|+||+|++++++++|..||.....    .+....+....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  231 (384)
T COG0515         152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP  231 (384)
T ss_pred             cCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC
Confidence            543322111   23556899999999998742003577899999999999999999999887653    34444333222


Q ss_pred             cC-C--CCCCCC----CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EK-P--CIPSGL----PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~-p--~~p~~l----p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .. .  ......    ...+.+++.+|+..+|..|.+..+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         232 TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            11 1  111111    257999999999999999998877664

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=5e-23  Score=221.11  Aligned_cols=169  Identities=18%  Similarity=0.151  Sum_probs=122.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc----hhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK----EDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~----~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .++|++.+.||+|+||+||+|.++...+     +.||||++....    .......+..+..++..+.+++.+..++.  
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--   89 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPG-----TARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--   89 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCC-----eEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence            4679999999999999999999875332     368999875321    12233445555567777754444434543  


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeee-eCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNL-KPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDL-KP~NILld~~g~vkL~DFGla  196 (632)
                        .+..||||||++|..+..+.     ...   ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|
T Consensus        90 --~~~~~LVmE~~~G~~L~~~~-----~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA  159 (365)
T PRK09188         90 --TGKDGLVRGWTEGVPLHLAR-----PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA  159 (365)
T ss_pred             --cCCcEEEEEccCCCCHHHhC-----ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence              25689999999975444321     111   1467889999999999999999999 999999999999999999999


Q ss_pred             eeccCCCCCC-----CccccccCCCccCCccccCCC
Q 006772          197 YLLLGRSLSD-----SDMALRLGTPNYMAPEQWEPE  227 (632)
Q Consensus       197 k~~~~~~~~~-----~~~~~~~GT~~YmAPE~~~~~  227 (632)
                      +.+.......     .+....++++.|+|||.+..+
T Consensus       160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             eecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            8765433211     122456789999999999754

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.89  E-value=8.1e-24  Score=211.09  Aligned_cols=255  Identities=19%  Similarity=0.327  Sum_probs=205.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhh--hccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP--KFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~--~l~~h~~I~~l~~~  116 (632)
                      -|+..++.+..+|.+...|+.|+|++..+        .++.|++.-..  ......+.+++.+.  ++-.||||+.+.+.
T Consensus       186 gid~~~lnl~tkl~e~hsgelwrgrwqgn--------divakil~vr~--~t~risrdfneefp~lrifshpnilpvlga  255 (448)
T KOG0195|consen  186 GIDVSSLNLITKLAESHSGELWRGRWQGN--------DIVAKILNVRE--VTARISRDFNEEFPALRIFSHPNILPVLGA  255 (448)
T ss_pred             CcchhhhhhhhhhccCCCcccccccccCc--------chhhhhhhhhh--cchhhcchhhhhCcceeeecCCchhhhhhh
Confidence            37888999999999999999999998764        36778775321  12223333334433  33479999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-ce-eeeeeCCeEEEecCCcEEEE--
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG-LL-VLNLKPSNLLLSEHDQLVLG--  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~-Iv-HRDLKP~NILld~~g~vkL~--  191 (632)
                      |.+.-.+.++..||+ |+|++.+++..+-..+-.++.+++.++++|++|||+.. ++ ---|....+++|++-+++|+  
T Consensus       256 cnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarisma  335 (448)
T KOG0195|consen  256 CNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMA  335 (448)
T ss_pred             ccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecc
Confidence            999999999999999 99999998877667788999999999999999999964 33 34788999999999887764  


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |--++..          .....-.|.||+||.++.......-.++|+|||+++|||+-|.+.||...++.+.-.+|...+
T Consensus       336 d~kfsfq----------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg  405 (448)
T KOG0195|consen  336 DTKFSFQ----------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG  405 (448)
T ss_pred             cceeeee----------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc
Confidence            3222111          111233789999999986544344568999999999999999999999999999888888889


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .++.+|+++++.+..||+-|+..||.+||.+..|+-.|+.+.
T Consensus       406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            999999999999999999999999999999999998888653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.86  E-value=6.6e-22  Score=226.28  Aligned_cols=235  Identities=25%  Similarity=0.439  Sum_probs=171.5

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      -..++|..++.|-.|+||.||+++|+.+.+      .+|+|+ .+.+     .+++             ||.      ..
T Consensus        80 p~e~df~~IklisngAygavylvrh~~trq------rfa~ki-Nkq~-----lilR-------------nil------t~  128 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETRQ------RFAMKI-NKQN-----LILR-------------NIL------TF  128 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeecccccc------chhhcc-cccc-----hhhh-------------ccc------cc
Confidence            345899999999999999999999987663      688853 2211     0111             011      11


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      -+..+.|     |+-..++...  ++++..        ++.+++|||+.+|+|||+||+|.||..-|++|++|||+++..
T Consensus       129 a~npfvv-----gDc~tllk~~--g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  129 AGNPFVV-----GDCATLLKNI--GPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             cCCccee-----chhhhhcccC--CCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhh
Confidence            1222222     4434444221  344433        388999999999999999999999999999999999998764


Q ss_pred             cCCCC--------C----CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          200 LGRSL--------S----DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       200 ~~~~~--------~----~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      .....        .    .-.....|||+.|.|||++..+   .|...+|||++|+++||.+-|..||+++++++++..+
T Consensus       194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq---gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v  270 (1205)
T KOG0606|consen  194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV  270 (1205)
T ss_pred             hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhh---ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh
Confidence            22110        0    0011235899999999999743   6888999999999999999999999999999998887


Q ss_pred             Hhhc-cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccc
Q 006772          268 VIKK-EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       268 ~~~~-~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                      +... ..+.-...+++++++++.++|+.+|..|.....   +++-.++.+|...+|..+.
T Consensus       271 isd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~g---a~evk~h~ff~~LDw~~ll  327 (1205)
T KOG0606|consen  271 ISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGG---ALEVKQHGFFQLLDWKSLL  327 (1205)
T ss_pred             hhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccch---hhhhhhccceeecccchhh
Confidence            7432 223334678999999999999999999985442   4555668888888998544

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=6.1e-21  Score=199.00  Aligned_cols=264  Identities=20%  Similarity=0.308  Sum_probs=185.2

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCc-----------------------------ccccEEEEEEecCCch
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDF-----------------------------DEYHELAVKMLLPLKE   87 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~-----------------------------~~~~~VAIK~l~~~~~   87 (632)
                      -..+..++|++++.||+|.-+.||-|+....+.+.                             ...=+.|||++.....
T Consensus       151 dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~  230 (598)
T KOG4158|consen  151 DSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEH  230 (598)
T ss_pred             hcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccccc
Confidence            34466789999999999999999999764322111                             0011567888754321


Q ss_pred             -hhHHHHHHHH-HHH-------------------h----hhccCCCceeEeeEEEEEC----------------------
Q 006772           88 -DCAKVFVNKF-EEL-------------------F----PKFRESQSVCWLHGISVIN----------------------  120 (632)
Q Consensus        88 -~~~~~~~~~~-~~i-------------------l----~~l~~h~~I~~l~~~~~~~----------------------  120 (632)
                       .....+++.. +++                   +    ..+..||||+.+...|.+.                      
T Consensus       231 ~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~  310 (598)
T KOG4158|consen  231 DSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPS  310 (598)
T ss_pred             CCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccc
Confidence             1222222211 110                   0    1234799999998776542                      


Q ss_pred             -----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe--cCC--cEEEE
Q 006772          121 -----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS--EHD--QLVLG  191 (632)
Q Consensus       121 -----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld--~~g--~vkL~  191 (632)
                           ..+|+||.-++.+|.+++..+   ..+......++.|+++|+.|||.+||.|||||.+|||+.  +++  ..+|+
T Consensus       311 g~g~~~tlylvMkrY~~tLr~yl~~~---~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVva  387 (598)
T KOG4158|consen  311 GAGEPKTLYLVMKRYRQTLREYLWTR---HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVA  387 (598)
T ss_pred             ccCCCceEEEehhcchhhHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEc
Confidence                 258999999999999988654   467778888999999999999999999999999999984  444  56899


Q ss_pred             ecCCceeccCCCCC---CCccccccCCCccCCccccCCCCCCCC----CcccccchhHHHHHHHHhCCCCCCCCCHHHHH
Q 006772          192 DFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEPEVRGPI----SFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY  264 (632)
Q Consensus       192 DFGlak~~~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~~g~~----t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~  264 (632)
                      |||++-.-....+.   .+.....-|...-||||+.... .|+.    -.++|.|+.|.+.||+++...||++.-..-+-
T Consensus       388 DFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~-PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~  466 (598)
T KOG4158|consen  388 DFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV-PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD  466 (598)
T ss_pred             ccceeeeccccccccccccccccCCCcceecchhhhhcC-CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec
Confidence            99987532221111   1122234577889999998643 2332    25799999999999999999999973221111


Q ss_pred             HHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHH
Q 006772          265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD  304 (632)
Q Consensus       265 ~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~e  304 (632)
                      ..-......|..|+.+|+.+++++..+|+.||.+|++..-
T Consensus       467 ~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i  506 (598)
T KOG4158|consen  467 TRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI  506 (598)
T ss_pred             hhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence            1112334567789999999999999999999999998643

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.82  E-value=2.6e-20  Score=193.03  Aligned_cols=238  Identities=22%  Similarity=0.297  Sum_probs=146.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhccC---------CCce
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKFRE---------SQSV  110 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l~~---------h~~I  110 (632)
                      ..+...+.||.|+|+.||.+++..+++      .+|+|+.......   ..+.+ +++......+..         |-.+
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~------~~avkvf~~~~~~~~~~~~~~-~~e~l~~~~~~~~~~p~~a~~~~r~   84 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGE------EFAVKVFLLPADASANEYEQL-KEEQLAITLFPGVKNPKEAYRHLRF   84 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTE------EEEEEEEEESSTTHTTHHHHH-HHHHHGGGGSTT--SHHHHHHHH-B
T ss_pred             eEEEEccccccCCceEEEEEEEccCCc------eEEEEEEecccccchHHHHHH-HHHHHHhhhhccCCCHHHHHHhceE
Confidence            367888999999999999999988775      8999997543221   12222 222212222111         1112


Q ss_pred             eEeeEEEEE---------C---C-----EEEEEEecCCCCHHHHHHHh---cCC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 006772          111 CWLHGISVI---------N---G-----KICIAMKFYEGSVGDRIAQQ---RGG--KLPLPDILRYGIQLAKGISDLHSI  168 (632)
Q Consensus       111 ~~l~~~~~~---------~---~-----~l~LVmEy~~GsL~d~l~~~---~~~--~l~~~~~~~ia~qIa~gL~yLHs~  168 (632)
                      +...+....         .   .     ..+++|+-+.++|.+.+.-.   ...  .+.....+.+..|+++.+++||+.
T Consensus        85 l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~  164 (288)
T PF14531_consen   85 LVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY  164 (288)
T ss_dssp             ---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeeeEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence            222222211         1   1     24788999999888776432   111  122334456668999999999999


Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCC-----CCCCCCcccccchhHH
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-----VRGPISFETDTWGFGC  243 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-----~~g~~t~ksDvwSlGv  243 (632)
                      |++|+||||+|+|++.+|.++|+||+........      ......+..|.+||.....     ..-.++.+.|.|+||+
T Consensus       165 GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~------~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~  238 (288)
T PF14531_consen  165 GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR------YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI  238 (288)
T ss_dssp             TEEEST-SGGGEEE-TTS-EEE--GGGEEETTEE------EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred             ceEecccceeeEEEcCCCCEEEcChHHHeecCce------eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence            9999999999999999999999999976553221      1112345789999976432     1234788999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCC
Q 006772          244 SIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR  299 (632)
Q Consensus       244 vL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~R  299 (632)
                      ++|.|.++..||...........    ....+  ..+|+.++.||..+|+.||++|
T Consensus       239 ~ly~lWC~~lPf~~~~~~~~~~~----~f~~C--~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  239 TLYSLWCGRLPFGLSSPEADPEW----DFSRC--RDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHSS-STCCCGGGSTSGG----GGTTS--S---HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHHccCCCCCCCccccccc----cchhc--CCcCHHHHHHHHHHccCCcccC
Confidence            99999999999987644321110    11222  3789999999999999999988

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=8.1e-21  Score=216.26  Aligned_cols=253  Identities=21%  Similarity=0.277  Sum_probs=175.1

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHH--HHhhhccCCCceeEeeEEEEECCEE
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE--ELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~--~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      .....+|.|.+|.|+.+......+.+. ...+.+| ..+  .+....+.....  -......+|+|++.......+....
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~-~~~~r~~-~~~--~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~  396 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFP-EKEFRVR-VKP--TESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI  396 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccch-hhhhhcc-cCC--cccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence            567889999999888887654443111 1122233 111  111121111111  1223334788876554444443333


Q ss_pred             EEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          124 CIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       124 ~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      +-.||||+++|..++...  +.+...++--++.||+.|+.|||+.||.||||||+|+++..+|.+||+|||.+.......
T Consensus       397 ~~~mE~~~~Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  397 LQSMEYCPYDLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             hhhhhcccHHHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence            344999999777777653  478999999999999999999999999999999999999999999999999987653322


Q ss_pred             CCC-CccccccCCCccCCccccCCCCCCCCC-cccccchhHHHHHHHHhCCCCCCCCCHHHHH-HHHHhh------ccCC
Q 006772          204 LSD-SDMALRLGTPNYMAPEQWEPEVRGPIS-FETDTWGFGCSIMEMLTGIQPWFGKSVEEIY-HSVVIK------KEKP  274 (632)
Q Consensus       204 ~~~-~~~~~~~GT~~YmAPE~~~~~~~g~~t-~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~-~~i~~~------~~~p  274 (632)
                      ... ......+|+..|+|||.+.+.   .|. ...||||.|++++.|.+|+.||.-....+.. ......      ....
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~---~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~  551 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGK---EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN  551 (601)
T ss_pred             chhhhhhcCcccCCcCcCccccccc---ccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence            211 234567899999999999865   343 5689999999999999999999865433211 111100      0111


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+-..+|.+.+.+|.++|+.||.+|.++++|++
T Consensus       552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            122467889999999999999999999999986

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.81  E-value=3.8e-21  Score=220.07  Aligned_cols=252  Identities=18%  Similarity=0.237  Sum_probs=184.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +|...+.||++.|=+|.+|.++..        .|+||++-+.. .-....+.++.+++-..+.++||.+.+.-+-..+..
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG--------~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kA   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREG--------LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKA   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCc--------eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHH
Confidence            689999999999999999987542        69999986543 445566666666665667789999988777677778


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      .|||-+|...+|+|++..+  .-+.+.+...|+.||+.||.-+|..||+|+|||.+||||+.-+.+.|+||..-|...-.
T Consensus        96 AylvRqyvkhnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen   96 AYLVRQYVKHNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHHHHHHhhhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            8999999999999998643  24677888999999999999999999999999999999999999999999965543111


Q ss_pred             CCCCCcccccc----CCCccCCccccCCCC--------CCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 006772          203 SLSDSDMALRL----GTPNYMAPEQWEPEV--------RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       203 ~~~~~~~~~~~----GT~~YmAPE~~~~~~--------~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~  269 (632)
                      ...+.+...+-    --..|+|||.+....        ....+++-||||+||++.|+++ |++||.-   .+++..-..
T Consensus       174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~aYr~~  250 (1431)
T KOG1240|consen  174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQLLAYRSG  250 (1431)
T ss_pred             CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HHHHhHhcc
Confidence            11222222221    134799999986421        1126788999999999999998 7888842   111111000


Q ss_pred             hccCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          270 KKEKPC--IPSGLPPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       270 ~~~~p~--~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      ....+.  ...--+..++.+|..|++.||.+|.++++.|+.
T Consensus       251 ~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  251 NADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             CccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            000000  001123479999999999999999999998864

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.80  E-value=1.3e-19  Score=178.45  Aligned_cols=139  Identities=16%  Similarity=0.114  Sum_probs=96.5

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-------------------------HHHHHHHHHHhh
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-------------------------KVFVNKFEELFP  102 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-------------------------~~~~~~~~~il~  102 (632)
                      ...||+|+||.||+|.+. ++      +.||||++++......                         ..+...+..++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g------~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   74 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NG------EERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLK   74 (190)
T ss_pred             CCccccccceEEEEEECC-CC------CEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHH
Confidence            467999999999999875 33      4899999975421100                         011112334444


Q ss_pred             hccCCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HhCCceeeeeeCCeEE
Q 006772          103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL-HSIGLLVLNLKPSNLL  181 (632)
Q Consensus       103 ~l~~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yL-Hs~~IvHRDLKP~NIL  181 (632)
                      .+. ++++.....+...  ..+|||||++|+.+.... ...+.+++.+++.++.|++.+|.|| |+.||+||||||+|||
T Consensus        75 ~l~-~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIl  150 (190)
T cd05147          75 RLV-TAGIPCPEPILLK--SHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLL  150 (190)
T ss_pred             HHH-HCCCCCCcEEEec--CCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence            442 2332222222222  238999999975433221 1235789999999999999999999 7999999999999999


Q ss_pred             EecCCcEEEEecCCcee
Q 006772          182 LSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       182 ld~~g~vkL~DFGlak~  198 (632)
                      ++ ++.++|+|||+|..
T Consensus       151 i~-~~~v~LiDFG~a~~  166 (190)
T cd05147         151 YH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             EE-CCcEEEEEcccccc
Confidence            98 58899999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=1.1e-18  Score=173.05  Aligned_cols=193  Identities=14%  Similarity=0.091  Sum_probs=135.3

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .....|++|+||+||++...        +..++.+.+.....-   .......++.+++.++.++++++.++++    +.
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~--------~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~   72 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGG--------ERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DG   72 (218)
T ss_pred             ccceeecCCCcceEEEeecC--------CceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cC
Confidence            35678999999999987641        246776666543321   1122345566778888888888888775    44


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeee-eCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNL-KPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDL-KP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|++|||+.|..+....       +.. ...++.|++.+|+++|++||+|||| ||+|||++.++.++|+|||+|.....
T Consensus        73 ~~lvmeyI~G~~L~~~~-------~~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         73 RHLDRSYLAGAAMYQRP-------PRG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             EEEEEeeecCccHHhhh-------hhh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            69999999985443211       111 2457789999999999999999999 79999999999999999999985433


Q ss_pred             CCC-----CCCc-----cccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC
Q 006772          202 RSL-----SDSD-----MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS  259 (632)
Q Consensus       202 ~~~-----~~~~-----~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~  259 (632)
                      ...     ...+     ......++.|++|+...--. ..--.+.++++.|+.+|.++|+..++.++.
T Consensus       145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~-~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK-RTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc-cchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            221     0000     11224688899998754211 111256789999999999999999876643

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.78  E-value=2e-18  Score=169.60  Aligned_cols=139  Identities=18%  Similarity=0.114  Sum_probs=99.0

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--h-------------------H----HHHHHHHHHHhh
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--C-------------------A----KVFVNKFEELFP  102 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~-------------------~----~~~~~~~~~il~  102 (632)
                      .+.||+|+||.||+|.+. ++      +.||||++.+....  .                   .    ......+...+.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g------~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   74 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DG------EELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLK   74 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CC------CEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHH
Confidence            468999999999999875 33      58999999764211  0                   0    111122333344


Q ss_pred             hccCCCceeEeeEEEEECCEEEEEEecCCCC-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeE
Q 006772          103 KFRESQSVCWLHGISVINGKICIAMKFYEGS-VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNL  180 (632)
Q Consensus       103 ~l~~h~~I~~l~~~~~~~~~l~LVmEy~~Gs-L~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NI  180 (632)
                      ++. ++++.....+...  ..||||||++|. +.....  ....++..++..++.|++.+|.+||+ +||+||||||+||
T Consensus        75 ~l~-~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NI  149 (190)
T cd05145          75 RLY-EAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNI  149 (190)
T ss_pred             HHH-hCCCCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhE
Confidence            443 3444333333222  248999999975 332222  23468889999999999999999999 9999999999999


Q ss_pred             EEecCCcEEEEecCCceec
Q 006772          181 LLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~  199 (632)
                      |++ ++.++|+|||++...
T Consensus       150 ll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         150 LYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             EEE-CCCEEEEEcccceec
Confidence            999 899999999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.76  E-value=2.3e-18  Score=173.63  Aligned_cols=170  Identities=12%  Similarity=0.135  Sum_probs=118.2

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHH---H-----HHHHHHHhhhccCCCceeE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV---F-----VNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~---~-----~~~~~~il~~l~~h~~I~~  112 (632)
                      -..+|+..+.||.|+||.||++...  +      ..+|||++.+........   +     .+.+...+.++ .|++|..
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~--~------~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~   99 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTD--Y------GKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLAS   99 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecC--C------CcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCc
Confidence            3578999999999999999997552  2      369999997643222111   1     22333345555 6788888


Q ss_pred             eeEEEEEC--------CEEEEEEecCCCC-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          113 LHGISVIN--------GKICIAMKFYEGS-VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       113 l~~~~~~~--------~~l~LVmEy~~Gs-L~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                      +..++...        +..+|+|||++|. |.+..      .+++    ....+++.+|..||..|++|||+||+|||++
T Consensus       100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~  169 (232)
T PRK10359        100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS  169 (232)
T ss_pred             ceEeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe
Confidence            77775533        4588999999984 44431      2333    2456999999999999999999999999999


Q ss_pred             cCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHH
Q 006772          184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM  248 (632)
Q Consensus       184 ~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Em  248 (632)
                      .+| ++|+|||..+.....    ...           ..+..   ...|..++|+||||+++.-+
T Consensus       170 ~~g-i~liDfg~~~~~~e~----~a~-----------d~~vl---er~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        170 KNG-LRIIDLSGKRCTAQR----KAK-----------DRIDL---ERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             CCC-EEEEECCCcccccch----hhH-----------HHHHH---HhHhcccccccceeEeehHH
Confidence            988 999999976543111    000           00222   12355789999999997654

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.73  E-value=2.4e-17  Score=181.11  Aligned_cols=207  Identities=24%  Similarity=0.293  Sum_probs=160.1

Q ss_pred             cCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-eeeeeeCCeEEE
Q 006772          105 RESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGL-LVLNLKPSNLLL  182 (632)
Q Consensus       105 ~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~I-vHRDLKP~NILl  182 (632)
                      ..|.|+..+.+.+..+...++|.+||. |+|.|.+... ...+++-....+.++|+.||+|||...| .|+.|++.|+++
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv   82 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV   82 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee
Confidence            368999999999999999999999997 9999998763 3567777888899999999999999876 999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCC----CCcccccchhHHHHHHHHhCCCCCCCC
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP----ISFETDTWGFGCSIMEMLTGIQPWFGK  258 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~----~t~ksDvwSlGvvL~EmltG~~PF~~~  258 (632)
                      |....+||+|||+....... ..........-..-|.|||.+.......    .+.+.|+||||++++|+++.+.||...
T Consensus        83 d~~w~lklt~~Gl~~~~~~~-~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~  161 (484)
T KOG1023|consen   83 DSRWVLKLTDFGLNSLLEET-AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLR  161 (484)
T ss_pred             eeeEEEEechhhhccccccc-ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccc
Confidence            99999999999997665321 0111111111234689999998642222    478899999999999999999999862


Q ss_pred             ----CHHHHHHHHHhhccCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          259 ----SVEEIYHSVVIKKEKPCIPS-----GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       259 ----~~~ei~~~i~~~~~~p~~p~-----~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                          ++.++...+......+..|.     .+++++..++.+||..+|.+||+++.+...++.+.
T Consensus       162 ~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~  225 (484)
T KOG1023|consen  162 NLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN  225 (484)
T ss_pred             cccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence                34455555543233333331     45668999999999999999999999887666544

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=4.3e-17  Score=190.25  Aligned_cols=251  Identities=19%  Similarity=0.234  Sum_probs=171.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..+.|.+.+.||+|+||+||.|.+.+       ++.||+|+-++...-..-. -.+....+. ..-.+-|..++.+..-
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-------~~~~alK~e~P~~~WEfYI-~~q~~~RLk-~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN-------GKLVALKVEKPPNPWEFYI-CLQVMERLK-PQMLPSIMHISSAHVF  765 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC-------CcEEEEEeecCCCceeeee-hHHHHHhhc-hhhhcchHHHHHHHcc
Confidence            344779999999999999999998765       2589999988755321110 011111111 1112334444444555


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-------CCcEEEE
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-------HDQLVLG  191 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-------~g~vkL~  191 (632)
                      .+.-+||+||.+ |+|+|++.  ..+-+++..+..++.|++.-+++||..+|||+||||+|+||..       +--++|+
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI  843 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLI  843 (974)
T ss_pred             CCcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEE
Confidence            667789999999 99999997  4468999999999999999999999999999999999999953       3368999


Q ss_pred             ecCCceeccCCCCCC-CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC-CCCCCHHHHHHHHHh
Q 006772          192 DFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEIYHSVVI  269 (632)
Q Consensus       192 DFGlak~~~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P-F~~~~~~ei~~~i~~  269 (632)
                      |||.|--+.  -..+ ......++|-.+-.+|+..+.   ++++.+|.|.|+-+++-||.|+.- +.+...         
T Consensus       844 DfG~siDm~--lfp~~~~F~~~~~td~f~C~EM~~gr---pWtYq~DyfGlAa~~h~mLFG~y~q~~~g~~---------  909 (974)
T KOG1166|consen  844 DFGRSIDMK--LFPDGTKFKAVWHTDLFDCIEMREGR---PWTYQIDYFGLAATVHVMLFGKYMEVKNGSS---------  909 (974)
T ss_pred             ecccceeee--EcCCCcEEeeeeccccchhHHHhcCC---CCchhhhhHHHHHHHHHHHHHHHHHhcCCcc---------
Confidence            999875331  1111 233456788999999998754   899999999999999999998542 000000         


Q ss_pred             hccCCCCCCCCCHH-HHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          270 KKEKPCIPSGLPPA-VENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       270 ~~~~p~~p~~lp~~-l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ......++..+..+ -.+++..+|..|-..=|...+|...|+.....
T Consensus       910 ~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~  956 (974)
T KOG1166|consen  910 WMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE  956 (974)
T ss_pred             eeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence            00111123333333 34567777775555556677777777665543

>PRK10345 hypothetical protein; Provisional

Probab=99.69  E-value=2.7e-16  Score=157.21  Aligned_cols=132  Identities=16%  Similarity=0.188  Sum_probs=96.5

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc----CCCceeEeeEEEEEC---
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR----ESQSVCWLHGISVIN---  120 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~----~h~~I~~l~~~~~~~---  120 (632)
                      .+.||+|+||.||.  +....       ..+||++..........+ .++..++..+.    .|+||+.+++++.++   
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~-------~k~IKv~~~~~~~~~~~~-~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~   76 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDA-------QRCIKIVYHRGDGGDKEI-RRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT   76 (210)
T ss_pred             cceecCCCceEEEE--CCCCc-------CeEEEEEeccccchHHHH-HHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence            56899999999995  44332       347998876433333333 33344555553    589999999999886   


Q ss_pred             CEEE-EEEecCC---CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHH-HHHHhCCceeeeeeCCeEEEecC----CcEEEE
Q 006772          121 GKIC-IAMKFYE---GSVGDRIAQQRGGKLPLPDILRYGIQLAKGI-SDLHSIGLLVLNLKPSNLLLSEH----DQLVLG  191 (632)
Q Consensus       121 ~~l~-LVmEy~~---GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL-~yLHs~~IvHRDLKP~NILld~~----g~vkL~  191 (632)
                      +.++ +||||..   |+|.+++.+   +.+++.  ..++.|++.++ +|||+++|+||||||+|||++..    +.++|+
T Consensus        77 g~v~~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~Li  151 (210)
T PRK10345         77 GYVYDVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVC  151 (210)
T ss_pred             eEEEEEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence            3544 7899944   588888854   246655  35678888888 99999999999999999999843    379999


Q ss_pred             ecC
Q 006772          192 DFG  194 (632)
Q Consensus       192 DFG  194 (632)
                      ||+
T Consensus       152 Dg~  154 (210)
T PRK10345        152 DNI  154 (210)
T ss_pred             ECC
Confidence            954

>smart00090 RIO RIO-like kinase

Probab=99.67  E-value=2.5e-16  Score=160.42  Aligned_cols=143  Identities=16%  Similarity=0.107  Sum_probs=100.5

Q ss_pred             CeEEEeEEcccCceEEEEEE-EcCCCCCcccccEEEEEEecCCchh-----------------------hHHHHHHHHHH
Q 006772           44 SLKLKHRIGRGPFGDVWLAT-HHQSADDFDEYHELAVKMLLPLKED-----------------------CAKVFVNKFEE   99 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~-~~~~~~~~~~~~~VAIK~l~~~~~~-----------------------~~~~~~~~~~~   99 (632)
                      -|++.+.||+|+||.||+|. +..++      +.||||+++.....                       ........+..
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  102 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSG------KERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR  102 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCC------cEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence            57889999999999999998 44333      58999998753210                       01122233444


Q ss_pred             HhhhccC-CCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeeeeeC
Q 006772          100 LFPKFRE-SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG-LLVLNLKP  177 (632)
Q Consensus       100 il~~l~~-h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~-IvHRDLKP  177 (632)
                      ++.++.+ ...++.++..    +..+|||||++|..+.... .....+...++..++.|++.+|.+||++| |+||||||
T Consensus       103 ~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp  177 (237)
T smart00090      103 NLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSE  177 (237)
T ss_pred             HHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCCh
Confidence            4555532 1223333322    2358999999984332221 12235666778899999999999999999 99999999


Q ss_pred             CeEEEecCCcEEEEecCCcee
Q 006772          178 SNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       178 ~NILld~~g~vkL~DFGlak~  198 (632)
                      +|||++ ++.++|+|||.+..
T Consensus       178 ~NIli~-~~~i~LiDFg~a~~  197 (237)
T smart00090      178 YNILVH-DGKVVIIDVSQSVE  197 (237)
T ss_pred             hhEEEE-CCCEEEEEChhhhc
Confidence            999999 88999999998764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.64  E-value=4.9e-17  Score=176.14  Aligned_cols=173  Identities=24%  Similarity=0.309  Sum_probs=127.7

Q ss_pred             CEEEEEEecCC-CCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .++||.|++|. .+|.+++.+.+ ....++...+.++.|++.|++|   ++.+|||+||.||+...+..+||.|||+...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            35889999998 78888886443 3567788899999999999999   9999999999999999999999999999876


Q ss_pred             ccCCCC---CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          199 LLGRSL---SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       199 ~~~~~~---~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ......   .....+...||..||+||++.++   .|+.++||||||++|+|+++ -..+|.....   +..+-.+..+|
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~---~y~~kvdIyaLGlil~EL~~~f~T~~er~~t---~~d~r~g~ip~  479 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ---QYSEKVDIYALGLILAELLIQFSTQFERIAT---LTDIRDGIIPP  479 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhhh---hhhhhcchhhHHHHHHHHHHHhccHHHHHHh---hhhhhcCCCCh
Confidence            533220   11233456899999999999865   68999999999999999997 4444432211   11111111111


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMA  303 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~  303 (632)
                      .+-... ++-..|+..++.+.|.+||++.
T Consensus       480 ~~~~d~-p~e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  480 EFLQDY-PEEYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             HHhhcC-cHHHHHHHHhcCCCcccCchHH
Confidence            111122 3556899999999999999443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=3.3e-15  Score=147.97  Aligned_cols=134  Identities=21%  Similarity=0.307  Sum_probs=97.6

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhH-----HHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCA-----KVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~-----~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +.||+|++|.||+|.+..        ..|++|+......  ...     ......+..++..+ .++++.....++...+
T Consensus         2 ~~l~~G~~~~vy~~~~~~--------~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~   72 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLG--------IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPE   72 (211)
T ss_pred             cccccCceEEEEEEeeCC--------CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCC
Confidence            579999999999998622        3689998754321  111     11122222344444 3556655555666677


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..+++|||++| +|.+.+...     .. ....++.+++.+|.+||+.+++|+|++|.|||++ ++.++|+|||++..
T Consensus        73 ~~~lv~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         73 NFIIVMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCEEEEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            88999999986 666665432     12 7889999999999999999999999999999999 78999999998754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.59  E-value=4.3e-15  Score=145.90  Aligned_cols=130  Identities=21%  Similarity=0.264  Sum_probs=91.1

Q ss_pred             EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhH-----HHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCA-----KVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        50 ~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~-----~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .||+|+||.||+|.+..        +.|++|.......  ...     ......+..++..+. ++++.....++...+.
T Consensus         1 ~ig~G~~~~vy~~~~~~--------~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~   71 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLG--------LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDN   71 (199)
T ss_pred             CCCCCceEEEEEeecCC--------ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCC
Confidence            38999999999998432        4699998654221  110     111223334444443 3444433444456667


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .+++|||++| ++.+.+....  .       .++.+++.+|.+||+.+++|+|+||+|||++ ++.++++|||++..
T Consensus        72 ~~lv~e~~~g~~l~~~~~~~~--~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        72 KTIVMEYIEGKPLKDVIEEGN--D-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CEEEEEEECCccHHHHHhhcH--H-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            7899999986 5555543211  0       7889999999999999999999999999999 89999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.58  E-value=7.9e-15  Score=144.64  Aligned_cols=136  Identities=17%  Similarity=0.166  Sum_probs=93.9

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh---------------------HHHHHHHHHHHhhh
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC---------------------AKVFVNKFEELFPK  103 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~---------------------~~~~~~~~~~il~~  103 (632)
                      |.+.+.||+|+||.||+|... ++      +.||||++.......                     .......+..++..
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   89 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DG------NPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA   89 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CC------CEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence            777899999999999999864 22      489999876422100                     00011122233333


Q ss_pred             ccCCC--ceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEE
Q 006772          104 FRESQ--SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLL  181 (632)
Q Consensus       104 l~~h~--~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NIL  181 (632)
                      +. +.  .++....    .+..+++|||++|..+..+..       ......++.+++.++.++|+.+|+||||||+|||
T Consensus        90 l~-~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nil  157 (198)
T cd05144          90 LY-EEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNIL  157 (198)
T ss_pred             HH-HcCCCCCceee----cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEE
Confidence            32 23  2222222    345689999999744433211       1345678899999999999999999999999999


Q ss_pred             EecCCcEEEEecCCceec
Q 006772          182 LSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       182 ld~~g~vkL~DFGlak~~  199 (632)
                      +++++.++|+|||++...
T Consensus       158 l~~~~~~~liDfg~~~~~  175 (198)
T cd05144         158 VDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             EcCCCcEEEEECCccccC
Confidence            999999999999988543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=1.8e-16  Score=180.72  Aligned_cols=260  Identities=22%  Similarity=0.302  Sum_probs=189.5

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ....|.+.+.||+|.|+.|-++......+     ..+|+|.+.... ..........+..+-..+..|+|+..+.+....
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~-----~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~   92 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPE-----SSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS   92 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCc-----ceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC
Confidence            35678999999999999998887655443     367777665432 111122222233333444559999999998888


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCceeeeeeCCeEEEecCC-cEEEEecCCc
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH-SIGLLVLNLKPSNLLLSEHD-QLVLGDFGIP  196 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLH-s~~IvHRDLKP~NILld~~g-~vkL~DFGla  196 (632)
                      .+..++.++|..| ++.+.+.......++...+-.++.|+..++.|+| ..++.||||||+|.+++.++ ..++.|||+|
T Consensus        93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A  172 (601)
T KOG0590|consen   93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA  172 (601)
T ss_pred             CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh
Confidence            8999999999875 5555542211225677889999999999999999 99999999999999999999 9999999999


Q ss_pred             eeccCCCCCCCccccccC-CCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHH-HHHHhhccC-
Q 006772          197 YLLLGRSLSDSDMALRLG-TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY-HSVVIKKEK-  273 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~G-T~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~-~~i~~~~~~-  273 (632)
                      ..+.............+| ++.|+|||...+..  -.....|+||.|+++.-|++|..||......... ......... 
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~--~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  250 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKA--YRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF  250 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccchh--hcCCCcccccccccccccccCCCCccccccccccceeeccccccc
Confidence            766441222233344678 99999999987531  2356899999999999999999999875543321 111111111 


Q ss_pred             -CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 -PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 -p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                       ......++....+++.+++..+|..|.+.+++..
T Consensus       251 ~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  251 TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccCccccCChhhhhcccccccCCchhccccccccc
Confidence             2233678899999999999999999999887664

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.57  E-value=1.1e-14  Score=141.32  Aligned_cols=136  Identities=21%  Similarity=0.239  Sum_probs=89.5

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHH---------------------HHHHHHhhhc
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFV---------------------NKFEELFPKF  104 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~---------------------~~~~~il~~l  104 (632)
                      .+.||+|+||.||+|.+. ++      +.||||++.+.....  .....                     ..+...+..+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~------~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l   74 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DG------EPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRL   74 (187)
T ss_pred             CcccccccceeEEEEECC-CC------CEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHH
Confidence            467999999999999865 22      489999987532111  11110                     1111222222


Q ss_pred             cCC-CceeEeeEEEEECCEEEEEEecCCCC-HH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeE
Q 006772          105 RES-QSVCWLHGISVINGKICIAMKFYEGS-VG-DRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNL  180 (632)
Q Consensus       105 ~~h-~~I~~l~~~~~~~~~l~LVmEy~~Gs-L~-d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NI  180 (632)
                      ..+ -.+..+.+.    ...+++|||++|. +. ..+...   .. ..++..++.+++.++.++|+ .+|+||||||+||
T Consensus        75 ~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni  146 (187)
T cd05119          75 YEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNI  146 (187)
T ss_pred             HHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh---hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence            221 122333222    2468999999972 11 111111   01 16788999999999999999 9999999999999


Q ss_pred             EEecCCcEEEEecCCceec
Q 006772          181 LLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~  199 (632)
                      |++ ++.++|+|||.+...
T Consensus       147 li~-~~~~~liDfg~a~~~  164 (187)
T cd05119         147 LVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             EEE-CCcEEEEECcccccc
Confidence            999 899999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.57  E-value=1.6e-14  Score=163.88  Aligned_cols=134  Identities=19%  Similarity=0.215  Sum_probs=96.4

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC--chh-----hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KED-----CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~--~~~-----~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      |...+.||+|+||+||++.+...        .+++|+....  ...     ...+....+..++..+ .|++++....++
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~~--------~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~  405 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLGR--------DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYD  405 (535)
T ss_pred             cCccceeccCCcEEEEEEeecCc--------cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEE
Confidence            45678999999999999987543        2344432211  111     1112223334445555 466777666666


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ......++||||++| +|.+.+.          ....++.+++.+|.|||+.+++||||||+|||+ +++.++|+|||++
T Consensus       406 ~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        406 VDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             EeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence            677778999999986 5555543          356789999999999999999999999999999 6789999999988


Q ss_pred             ee
Q 006772          197 YL  198 (632)
Q Consensus       197 k~  198 (632)
                      +.
T Consensus       475 ~~  476 (535)
T PRK09605        475 KY  476 (535)
T ss_pred             cc
Confidence            64

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.50  E-value=1.2e-13  Score=126.72  Aligned_cols=133  Identities=17%  Similarity=0.166  Sum_probs=101.3

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCC-CceeEeeEEEEECCEEEE
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRES-QSVCWLHGISVINGKICI  125 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h-~~I~~l~~~~~~~~~l~L  125 (632)
                      +.+.||+|.++.||++....        ..+++|...+...  ...+ ..+...+..+.++ ..++.+......++..++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--------~~~~iK~~~~~~~--~~~~-~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~   70 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--------EDYVLKINPSREK--GADR-EREVAILQLLARKGLPVPKVLASGESDGWSYL   70 (155)
T ss_pred             cceecccccccceEEEEecC--------CeEEEEecCCCCc--hhHH-HHHHHHHHHHHHcCCCCCeEEEEcCCCCccEE
Confidence            35789999999999998743        3699999865432  1222 3333445555444 567777777777788999


Q ss_pred             EEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          126 AMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI---GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       126 VmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~---~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      +|||+.|.....+        +......++.+++.+|++||..   +++|+||+|+|||+++.+.++++|||++..
T Consensus        71 v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          71 LMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            9999997433211        5566778899999999999985   699999999999999999999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.48  E-value=2.1e-14  Score=165.44  Aligned_cols=276  Identities=19%  Similarity=0.230  Sum_probs=196.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ..++++.+.+.+-+-+|.|+.+..+.-..++      +..++|+.....   ....+....+  .......++|.++...
T Consensus       799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sg------h~~~~~v~~~ap~i~~~~~~s~r~~--s~~~i~p~~P~v~~~~  870 (1205)
T KOG0606|consen  799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSG------HTRPSKVHGLAPKIRTNDYESIRSK--SNILITPRSPAVVRSF  870 (1205)
T ss_pred             ccCCCccceecccccCCCCcccccCCccccc------cccchhhhccchhhccccccccCCc--cCccccCCCCceeccc
Confidence            3467789999999999999999998765554      234555443211   1101111111  0011112345555443


Q ss_pred             EEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .-+......+|+|+|+.| ++...++..  +..+.+-++.+...+..+++|||+..+.|||++|.|+|...+++.+++||
T Consensus       871 ~s~~~rsP~~L~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~  948 (1205)
T KOG0606|consen  871 PSFPCRSPLPLVGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDF  948 (1205)
T ss_pred             CCCCCCCCcchhhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcc
Confidence            335567789999999984 555555432  46777788889999999999999999999999999999999999999999


Q ss_pred             CCceec-cC-----C----------CC--------CCC----ccccccCCCccCCccccCCCCCCCCCcccccchhHHHH
Q 006772          194 GIPYLL-LG-----R----------SL--------SDS----DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSI  245 (632)
Q Consensus       194 Glak~~-~~-----~----------~~--------~~~----~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL  245 (632)
                      |..... ..     .          ..        ...    ......||+.|.+||...+.   .....+|+|++|+++
T Consensus       949 ~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~---~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen  949 GTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR---RHGSAADWWSSGVCL 1025 (1205)
T ss_pred             ccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc---cCCCcchhhhhhhhh
Confidence            833221 00     0          00        000    12234789999999999865   455689999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhhccC-CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          246 MEMLTGIQPWFGKSVEEIYHSVVIKKEK-PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       246 ~EmltG~~PF~~~~~~ei~~~i~~~~~~-p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                      +|.++|.+||....+.+++..+...... +.-|...+++.++++.+.+..+|.+|..+..   .-+.-.+.++.+.+|+.
T Consensus      1026 ~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~---~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKG---AAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred             hhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCccc---ccccccCCccCCCCccc
Confidence            9999999999999999999887643322 3344678999999999999999999998763   22334578899999998


Q ss_pred             ccccc
Q 006772          325 LGSRA  329 (632)
Q Consensus       325 ~~~~~  329 (632)
                      +....
T Consensus      1103 l~~q~ 1107 (1205)
T KOG0606|consen 1103 LALQK 1107 (1205)
T ss_pred             ccccc
Confidence            76543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.43  E-value=1.6e-12  Score=132.66  Aligned_cols=144  Identities=17%  Similarity=0.217  Sum_probs=94.0

Q ss_pred             CcCCCCeEEE-eEEc-ccCceEEEEEEEcCCCCCcccccEEEEEEecCCc------hh------hHHHHHHHHHHHhhhc
Q 006772           39 WIDPTSLKLK-HRIG-RGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK------ED------CAKVFVNKFEELFPKF  104 (632)
Q Consensus        39 ~I~~~~y~l~-~~IG-~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~------~~------~~~~~~~~~~~il~~l  104 (632)
                      |.+++.+... ..|| .||.|+||.+....        ..++||.+....      ..      .......++..++..+
T Consensus        26 ~~~~~~~~~~~~~lg~~~g~gtv~~v~~~~--------~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L   97 (239)
T PRK01723         26 LFDPDFWQQQARVVGSAKGRGTTWFVQTPG--------VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL   97 (239)
T ss_pred             hcCHHHHhhcCceeecCCCCccEEEEEeCC--------ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH
Confidence            5566555433 4577 88899999887531        368998875311      00      0111122233444444


Q ss_pred             cCCCc--eeEeeEEEEE-CC---EEEEEEecCCC--CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeee
Q 006772          105 RESQS--VCWLHGISVI-NG---KICIAMKFYEG--SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK  176 (632)
Q Consensus       105 ~~h~~--I~~l~~~~~~-~~---~l~LVmEy~~G--sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLK  176 (632)
                      . +++  ++...++... .+   ..+|||||++|  +|.+++..   ..++...    +.+|+.+|.+||++||+|||||
T Consensus        98 ~-~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~~----~~~i~~~l~~lH~~GI~HrDlk  169 (239)
T PRK01723         98 Y-EAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE---APLSEEQ----WQAIGQLIARFHDAGVYHADLN  169 (239)
T ss_pred             H-hCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHHH----HHHHHHHHHHHHHCCCCCCCCC
Confidence            3 333  3444444332 22   23599999996  66666532   3455443    5689999999999999999999


Q ss_pred             CCeEEEecCCcEEEEecCCcee
Q 006772          177 PSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       177 P~NILld~~g~vkL~DFGlak~  198 (632)
                      |+|||++.++.++|+|||.+..
T Consensus       170 p~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        170 AHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             chhEEEcCCCCEEEEECCCccc
Confidence            9999999999999999997653

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.31  E-value=1.4e-12  Score=143.92  Aligned_cols=254  Identities=18%  Similarity=0.132  Sum_probs=181.9

Q ss_pred             CCeEEEeEEcc--cCceEEEEEEEcCCCCCcccccEEEEEEecCC-c-hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           43 TSLKLKHRIGR--GPFGDVWLATHHQSADDFDEYHELAVKMLLPL-K-EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        43 ~~y~l~~~IG~--G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~-~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..+.+.+.+|.  |.+|.||.+.+...    .....+|+|.-+.. . ......-.+++ ....++..|++.+..+..+.
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~----~s~~~~a~k~s~~p~s~p~~~~~k~~~~-~s~~~i~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNS----ESPHKFAVKKSKIPFSPPLDSKRKLREF-LSHHKIDSHENPVRDSPAWE  188 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcc----cCCcccccccccCCCCCccccccccchh-hcccccCccccccccCcccc
Confidence            45677899999  99999999987321    12347888873221 1 11111111221 22345567888888888888


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHH----HHHHHHhCCceeeeeeCCeEEEecC-CcEEEEec
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAK----GISDLHSIGLLVLNLKPSNLLLSEH-DQLVLGDF  193 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~----gL~yLHs~~IvHRDLKP~NILld~~-g~vkL~DF  193 (632)
                      ..+.+|+-+|++..++..+... ....++...++.+..+...    ||.++|+.+++|-|+||.||++..+ ...+++||
T Consensus       189 ~~~~lfiqtE~~~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  189 GSGILFIQTELCGESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             cCCcceeeeccccchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence            8999999999999887776654 3446888899999999999    9999999999999999999999999 78999999


Q ss_pred             CCceeccCCCCCCCcc--ccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          194 GIPYLLLGRSLSDSDM--ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       194 Glak~~~~~~~~~~~~--~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |+...+..........  ....|...|++||...+    -++..+|+||+|.++.+..++..++...... .+..+-...
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~----l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W~~~r~~~  342 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG----LATFASDIFSLGEVILEAILGSHLPSVGKNS-SWSQLRQGY  342 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhcc----ccchHhhhcchhhhhHhhHhhcccccCCCCC-Ccccccccc
Confidence            9987764433221111  12257789999999864    5788999999999999998876664432100 011111112


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....+-...+.++...+..+++.+|..|++...++.
T Consensus       343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            233344566778888999999999999999887764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.30  E-value=1.5e-11  Score=136.21  Aligned_cols=140  Identities=21%  Similarity=0.258  Sum_probs=90.9

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHH------------------------------------
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV------------------------------------   92 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~------------------------------------   92 (632)
                      +.||.|++|.||+|+.+.       ++.||||+.++........                                    
T Consensus       123 ~plasaSigQVh~A~l~~-------G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  195 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVD-------GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR  195 (437)
T ss_pred             cceeeeehhheEEEEecC-------CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence            579999999999998753       2489999987743211110                                    


Q ss_pred             ----HHHHHH---HHhhhccCCCceeEeeEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHH-HHH
Q 006772           93 ----FVNKFE---ELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAK-GIS  163 (632)
Q Consensus        93 ----~~~~~~---~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~-gL~  163 (632)
                          +.++..   .+.....+++++.....+....+..+|||||++| ++.+...... ..+   +...++.+++. .+.
T Consensus       196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~  271 (437)
T TIGR01982       196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLN  271 (437)
T ss_pred             HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHH
Confidence                000000   1111223455554333333334557899999997 4444432211 122   23456666665 478


Q ss_pred             HHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       164 yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      .+|..|++|+|+||.||+++.++.++|+|||++..+
T Consensus       272 ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       272 QVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             HHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            899999999999999999999999999999998765

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.15  E-value=1.3e-10  Score=110.65  Aligned_cols=128  Identities=19%  Similarity=0.008  Sum_probs=84.6

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAM  127 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVm  127 (632)
                      .+.|+.|.++.||+++...        ..|++|+........ .. ...+...+..+.+...++.++...  ....++||
T Consensus         3 ~~~l~~G~~~~vy~~~~~~--------~~~~lK~~~~~~~~~-~~-~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~   70 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVAN--------KKYVVRIPGNGTELL-IN-RENEAENSKLAAEAGIGPKLYYFD--PETGVLIT   70 (170)
T ss_pred             eeecCCcccCceEEEEECC--------eEEEEEeCCCCcccc-cC-HHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEE
Confidence            4678999999999998641        479999876543111 11 122223333333333344444443  33357999


Q ss_pred             ecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          128 KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGL-----LVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       128 Ey~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~I-----vHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ||++|......      .   .....++.+++.+|+.||+.++     +|+|++|.|||++ ++.++++||+.+.
T Consensus        71 e~i~G~~l~~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          71 EFIEGSELLTE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             EecCCCccccc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            99998433211      0   1123456799999999999885     9999999999999 6789999999764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.14  E-value=6e-11  Score=133.58  Aligned_cols=143  Identities=19%  Similarity=0.217  Sum_probs=85.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH--------------------------HHHHHH
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA--------------------------KVFVNK   96 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~--------------------------~~~~~~   96 (632)
                      ++|.. +.||+|++|.||+|+.+.++      +.||||++++.-....                          .+...+
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G------~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e  192 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNG------REVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAE  192 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCC------CEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHH
Confidence            45665 78999999999999987644      4899999976421110                          000000


Q ss_pred             -------------HHHHhhhc----cCCCceeEeeEEEEECCEEEEEEecCCC-CHHHHHHHhcC-C----CCCHHHHHH
Q 006772           97 -------------FEELFPKF----RESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRG-G----KLPLPDILR  153 (632)
Q Consensus        97 -------------~~~il~~l----~~h~~I~~l~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~-~----~l~~~~~~~  153 (632)
                                   +...+.++    .+.+.+....-+..-....+|||||+.| .+.+. ..... +    .+....+..
T Consensus       193 ~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~-~~l~~~g~d~~~la~~~v~~  271 (537)
T PRK04750        193 FEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV-AALRAAGTDMKLLAERGVEV  271 (537)
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH-HHHHhcCCCHHHHHHHHHHH
Confidence                         00111111    1222222111111223456799999997 44432 11111 1    233333444


Q ss_pred             HHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC----cEEEEecCCceecc
Q 006772          154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLGDFGIPYLLL  200 (632)
Q Consensus       154 ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g----~vkL~DFGlak~~~  200 (632)
                      ++.|+       +..|++|+|+||.||+++.+|    .++++|||++..+.
T Consensus       272 ~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        272 FFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             HHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            44444       458999999999999999988    99999999987663

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.04  E-value=1.3e-10  Score=128.55  Aligned_cols=246  Identities=21%  Similarity=0.173  Sum_probs=166.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHH-HHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~-~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ..+|.++..||.|.|+.|+....+..+     +..|++|.+.+.......+.. -.+..+...+.-|.+++.....+.+.
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~-----~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEG-----DCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCC-----CceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence            367999999999999999998743222     247888887653322222211 11222233445566777666666677


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC-CcEEEEecCCceec
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-DQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~-g~vkL~DFGlak~~  199 (632)
                      .+.||-.|||+|...++.. .....+.+...+++..|++.++.++|++.++|+|+||+||++..+ +..++.|||++..+
T Consensus       339 r~~~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL  417 (524)
T ss_pred             ccccCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc
Confidence            7788999999864333332 222467888999999999999999999999999999999999986 78899999988642


Q ss_pred             cCCCCCCCccccccCCCccC-CccccCCCCCCCCCcccccchhHHHHHHHHhCCCC-CCCCCHHHHHHHHHhhccCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYM-APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~Ym-APE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P-F~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .-.     . ....+.-+++ ..|.+..  ...+-.+.|++|||..+.|.+++..- ..+..-.    .+ .....+..+
T Consensus       418 ~~~-----~-~~~~~~~r~~p~~~~~~e--~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~----~i-~~~~~p~~~  484 (524)
T KOG0601|consen  418 AFS-----S-GVFHHIDRLYPIAEILLE--DYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL----TI-RSGDTPNLP  484 (524)
T ss_pred             cee-----c-ccccccccccccchhhcc--ccccccccccccccccccccccCcccCcccccce----ee-ecccccCCC
Confidence            111     0 1112333444 2454442  23567899999999999999998653 2221111    11 112233333


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                       ....++..+...+...|+..||.+.++..
T Consensus       485 -~~~~~~q~~~kv~~~~~~~~~~l~~~l~~  513 (524)
T KOG0601|consen  485 -GLKLQLQVLLKVMINPDRKRRPSAVELSL  513 (524)
T ss_pred             -chHHhhhhhhhhhcCCccccchhhhhhcc
Confidence             33488999999999999999999887664

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.02  E-value=2.2e-09  Score=106.22  Aligned_cols=142  Identities=15%  Similarity=0.104  Sum_probs=91.3

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-----------h----------hHHHHHH----HHHHHhhh
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-----------D----------CAKVFVN----KFEELFPK  103 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-----------~----------~~~~~~~----~~~~il~~  103 (632)
                      ..||.|-=+.||.|...........+..+|||+.+....           +          .......    ++...+.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997543110001235899999754110           0          0011111    33334444


Q ss_pred             ccCC-CceeEeeEEEEECCEEEEEEecCCCCHH--HHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HhCCceeeeeeCCe
Q 006772          104 FRES-QSVCWLHGISVINGKICIAMKFYEGSVG--DRIAQQRGGKLPLPDILRYGIQLAKGISDL-HSIGLLVLNLKPSN  179 (632)
Q Consensus       104 l~~h-~~I~~l~~~~~~~~~l~LVmEy~~GsL~--d~l~~~~~~~l~~~~~~~ia~qIa~gL~yL-Hs~~IvHRDLKP~N  179 (632)
                      +... -.++.++.+    ...+|||||+.|+..  ..+   +...++..+...+..+++.+|..| |..+|+|+||++.|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N  155 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN  155 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            4332 234444433    456789999986311  122   122455666778889999999999 89999999999999


Q ss_pred             EEEecCCcEEEEecCCcee
Q 006772          180 LLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       180 ILld~~g~vkL~DFGlak~  198 (632)
                      ||++ ++.+.|+|||.+-.
T Consensus       156 IL~~-~~~v~iIDF~qav~  173 (197)
T cd05146         156 MLWH-DGKVWFIDVSQSVE  173 (197)
T ss_pred             EEEE-CCcEEEEECCCcee
Confidence            9997 47899999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.93  E-value=2.5e-08  Score=106.47  Aligned_cols=254  Identities=18%  Similarity=0.223  Sum_probs=162.4

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeE----eeEE--EE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCW----LHGI--SV  118 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~----l~~~--~~  118 (632)
                      +.+.+.||+|+-+.+|-.-.         .+..+-|++++.......+.    .+.+.+...||-+..    ....  .-
T Consensus        13 i~~gr~LgqGgea~ly~l~e---------~~d~VAKIYh~Pppa~~aqk----~a~la~~p~~p~~~~rvaWPqa~L~G~   79 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLGE---------VRDQVAKIYHAPPPAAQAQK----VAELAATPDAPLLNYRVAWPQATLHGG   79 (637)
T ss_pred             cCCCccccCCccceeeecch---------hhchhheeecCCCchHHHHH----HHHhccCCCCcchhhhhcccHHHhhCC
Confidence            34567899999999996431         12345588765433222211    123344445554322    1110  11


Q ss_pred             EC-CEEEEEEecCCC--CHHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          119 IN-GKICIAMKFYEG--SVGDRIAQ----QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       119 ~~-~~l~LVmEy~~G--sL~d~l~~----~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      .. ..+-+.|..+.|  ...+++.-    +..-.+.|.-+++.++.|+.+.+.||.+|.+-+|+.++|+|+++++.+.|.
T Consensus        80 ~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LV  159 (637)
T COG4248          80 RRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLV  159 (637)
T ss_pred             CccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEE
Confidence            12 237788999886  22322221    112346788999999999999999999999999999999999999999998


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccC-CC-CCCCCCcccccchhHHHHHHHHhC-CCCCCCCC-------HH
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE-PE-VRGPISFETDTWGFGCSIMEMLTG-IQPWFGKS-------VE  261 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~~-~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~-------~~  261 (632)
                      |-..-.. .   .........+|...|.+||.-. +. ..-.-+...|.|.||++++++|.| +.||.|..       +.
T Consensus       160 dsDsfqi-~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~  235 (637)
T COG4248         160 DSDSFQI-N---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPL  235 (637)
T ss_pred             cccceee-c---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcc
Confidence            8432111 1   1223334457899999999865 21 122346789999999999999985 99998732       22


Q ss_pred             H--HHHHHH---hhccCCCC------C-CCCCHHHHHHHHHhhhcC--cCCCCCHHHHHHHHHhhhhc
Q 006772          262 E--IYHSVV---IKKEKPCI------P-SGLPPAVENVIIGCFEYD--LRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       262 e--i~~~i~---~~~~~p~~------p-~~lp~~l~~LI~~cL~~D--P~~RPs~~ell~~Le~~~~~  315 (632)
                      +  |..-..   .+..++..      | +.+++++..|..+|+..-  +.-||+++..+.+|..+...
T Consensus       236 E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~  303 (637)
T COG4248         236 ETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ  303 (637)
T ss_pred             hhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence            2  111000   11111111      1 457899999999999853  56899999888877766543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=1.6e-09  Score=112.22  Aligned_cols=191  Identities=18%  Similarity=0.219  Sum_probs=131.0

Q ss_pred             CCCceeEeeEEEEEC-----CEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC--Cceeeee
Q 006772          106 ESQSVCWLHGISVIN-----GKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSI--GLLVLNL  175 (632)
Q Consensus       106 ~h~~I~~l~~~~~~~-----~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~--~IvHRDL  175 (632)
                      .|.||+.++-+..+.     ....+++|||. |++..++.+.+  ...+....-.+++-||+.||.|||+.  -|+|+++
T Consensus       125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl  204 (458)
T KOG1266|consen  125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL  204 (458)
T ss_pred             HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence            467788888776543     35778999998 88888887653  36788888999999999999999996  4999999


Q ss_pred             eCCeEEEecCCcEEEEecCCceeccC-CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC
Q 006772          176 KPSNLLLSEHDQLVLGDFGIPYLLLG-RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP  254 (632)
Q Consensus       176 KP~NILld~~g~vkL~DFGlak~~~~-~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P  254 (632)
                      ...-|++..+|.+|+.--.-...... ............|-++|.+||.=.   ....+.++|||+||....||..+..-
T Consensus       205 Tc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~---~tn~~~a~dIy~fgmcAlemailEiq  281 (458)
T KOG1266|consen  205 TCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT---TTNTTGASDIYKFGMCALEMAILEIQ  281 (458)
T ss_pred             chhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCc---ccccccchhhhhhhHHHHHHHHheec
Confidence            99999999999988753221111000 000111112234678899999743   23456789999999999999887643


Q ss_pred             -CCCCC---HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          255 -WFGKS---VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       255 -F~~~~---~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                       -.+.+   .++.....+....        ..--+.++.+|++-.|..||+|.+++.
T Consensus       282 ~tnseS~~~~ee~ia~~i~~le--------n~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  282 STNSESKVEVEENIANVIIGLE--------NGLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             cCCCcceeehhhhhhhheeecc--------CccccCcCcccccCCCCCCcchhhhhc
Confidence             33322   1222222221111        122356899999999999999998774

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.86  E-value=3.3e-08  Score=95.66  Aligned_cols=142  Identities=19%  Similarity=0.159  Sum_probs=96.8

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-------hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-------DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-------~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ....|-+|+=+.|+++.+..        +.+.||.-.....       .-.......+..++.++... .|+-..-++.+
T Consensus        11 ~l~likQGAEArv~~~~~~G--------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D   81 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSG--------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFID   81 (229)
T ss_pred             cceeeeccceeeEeeeccCC--------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEe
Confidence            45677889999999987643        3566665432211       11111122233445555433 44444455667


Q ss_pred             CCEEEEEEecCCC--CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cEEEEecC
Q 006772          120 NGKICIAMKFYEG--SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFG  194 (632)
Q Consensus       120 ~~~l~LVmEy~~G--sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~vkL~DFG  194 (632)
                      ...-+|+|||++|  ++.+++...............++.+|-..|.-||..+|||+||..+||+|..++   .+.++|||
T Consensus        82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   82 TYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             cCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeec
Confidence            7777899999999  777777665433333344478889999999999999999999999999998766   35899999


Q ss_pred             Cce
Q 006772          195 IPY  197 (632)
Q Consensus       195 lak  197 (632)
                      ++.
T Consensus       162 ls~  164 (229)
T KOG3087|consen  162 LSS  164 (229)
T ss_pred             chh
Confidence            874

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.82  E-value=1e-07  Score=107.09  Aligned_cols=219  Identities=14%  Similarity=0.142  Sum_probs=135.7

Q ss_pred             cEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHH
Q 006772           75 HELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY  154 (632)
Q Consensus        75 ~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~i  154 (632)
                      .+|.|..++...... ....++....++. .+||+|+.++...+.++.+|||+|-+.- |..++.+.     ....+..-
T Consensus        38 ~~vsVF~~~~~~~~~-~~~~~~A~k~lKt-lRHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~l-----~~~~v~~G  109 (690)
T KOG1243|consen   38 GPVSVFVYKRSNGEV-TELAKRAVKRLKT-LRHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKEL-----GKEEVCLG  109 (690)
T ss_pred             CceEEEEEeCCCchh-hHHHHHHHHHhhh-ccCchhhhhhhhhcccCceEEEeecccc-HHHHHHHh-----HHHHHHHH
Confidence            478888776554421 2222222222333 4799999999999999999999999973 23344332     35667777


Q ss_pred             HHHHHHHHHHHH-hCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCC
Q 006772          155 GIQLAKGISDLH-SIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPIS  233 (632)
Q Consensus       155 a~qIa~gL~yLH-s~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t  233 (632)
                      +.||+.||.||| ..+++|++|.-..|+++..|..||++|-++....+.....   ....--..|..|+.+...     +
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~---~~~~~~~s~~~P~~~~~s-----~  181 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA---KSLYLIESFDDPEEIDPS-----E  181 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc---ccchhhhcccChhhcCcc-----c
Confidence            889999999998 5689999999999999999999999999875543221100   001112246677765422     2


Q ss_pred             cccccchhHHHHHHHHhCCCCCCC------CCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          234 FETDTWGFGCSIMEMLTGIQPWFG------KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       234 ~ksDvwSlGvvL~EmltG~~PF~~------~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...|.|-|||+++|++.|..+=..      ..+ ........  .+..-.+..-+...+++..|...-+--|=.+-+++.
T Consensus       182 ~s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ip-k~~~~~~~--k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~  258 (690)
T KOG1243|consen  182 WSIDSWGLGCLIEELFNGSLLTKTDLSNTGKIP-KALIELYC--KKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLL  258 (690)
T ss_pred             cchhhhhHHHHHHHHhCcccCcchhhhccCccc-hhHHHHHH--HHhccccccccchhhHHHHHHhccccccchHHHHHH
Confidence            456999999999999999332111      111 00000000  000000111122566777777766666666666666


Q ss_pred             HHHhh
Q 006772          308 AFESS  312 (632)
Q Consensus       308 ~Le~~  312 (632)
                      .|+.+
T Consensus       259 fLeel  263 (690)
T KOG1243|consen  259 FLEEL  263 (690)
T ss_pred             HHHhc
Confidence            66554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.75  E-value=8.2e-08  Score=93.20  Aligned_cols=132  Identities=20%  Similarity=0.208  Sum_probs=87.1

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHH-----HHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVF-----VNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~-----~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ..|.+|+=+.+|++.+..        ..+++|.=.+..  .....+.     ...+..++.++... .++...-+..+.+
T Consensus         2 ~~i~~GAEa~i~~~~~~g--------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~~   72 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLG--------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDPD   72 (204)
T ss_pred             chhhCCcceeEEeeeccC--------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcCC
Confidence            357889999999986532        246666543321  1111111     22233444444332 4444445566777


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ...|+|||++|.++.-.....        ...++..+-.-+.-||..||+|+||.++||+++.++ +.++|||+++.
T Consensus        73 ~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          73 NGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             CCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            788999999997665332221        245667777778889999999999999999998765 99999999864

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.71  E-value=4.6e-08  Score=96.70  Aligned_cols=140  Identities=16%  Similarity=0.096  Sum_probs=89.8

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCC-CceeEeeEEEEEC---CEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRES-QSVCWLHGISVIN---GKIC  124 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h-~~I~~l~~~~~~~---~~l~  124 (632)
                      +.|+.|.++.||++....       +..+++|+...............+..++..+..+ ..++.++.+....   +..+
T Consensus         4 ~~l~~G~~n~~~~v~~~~-------g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~   76 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-------GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPF   76 (223)
T ss_pred             eecCCCccceEEEEEecC-------CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCce
Confidence            578999999999998643       1368999876432210111223333444444332 2344455544432   3678


Q ss_pred             EEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------
Q 006772          125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-------------------------------------  167 (632)
Q Consensus       125 LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-------------------------------------  167 (632)
                      ++|||++|........  ...++..+...++.+++..|.+||+                                     
T Consensus        77 ~v~e~i~G~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (223)
T cd05154          77 YVMERVDGRVLRDRLL--RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP  154 (223)
T ss_pred             EEEEEeCCEecCCCCC--CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence            9999999742222110  0246666777777777777777773                                     


Q ss_pred             -------------------CCceeeeeeCCeEEEec--CCcEEEEecCCce
Q 006772          168 -------------------IGLLVLNLKPSNLLLSE--HDQLVLGDFGIPY  197 (632)
Q Consensus       168 -------------------~~IvHRDLKP~NILld~--~g~vkL~DFGlak  197 (632)
                                         ..++|+|++|.|||++.  ++.+.|+||+.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                               23599999999999998  6678999999764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.69  E-value=7.2e-07  Score=97.72  Aligned_cols=209  Identities=17%  Similarity=0.207  Sum_probs=147.1

Q ss_pred             CceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE----CCEEEEEE
Q 006772           55 PFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI----NGKICIAM  127 (632)
Q Consensus        55 ~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~----~~~l~LVm  127 (632)
                      .-.+.|+++....+      ..|++|+++-...   ...-...+.    .+++ .|.|++.++.++.+    +..+++|+
T Consensus       288 ~~~Ttyk~~s~~DG------~~YvLkRlhg~r~~~~nk~t~lve~----wkkl-~h~NvV~frevf~t~tF~D~SlvlvY  356 (655)
T KOG3741|consen  288 FSITTYKATSNVDG------NAYVLKRLHGDRDQSTNKDTSLVEA----WKKL-CHTNVVPFREVFLTYTFGDLSLVLVY  356 (655)
T ss_pred             ccceeEeeeeccCC------ceeeeeeeccccccCcccchHHHHH----HHHh-ccCceeehhhhhhhhccCcceEEEEE
Confidence            34677999876544      4799999943221   111222222    2232 68999999998874    45789999


Q ss_pred             ecCC--CCHHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          128 KFYE--GSVGDRIAQQR-------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       128 Ey~~--GsL~d~l~~~~-------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      +|++  ++|+++.....             +...++...|.|+.||..||.++|+.|+.-+-|.|.+||++.+.+++|+-
T Consensus       357 DYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~  436 (655)
T KOG3741|consen  357 DYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISG  436 (655)
T ss_pred             ecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEec
Confidence            9998  58888775432             23567899999999999999999999999999999999999998999988


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC-CCCCCHHHH-HHHHHhh
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEI-YHSVVIK  270 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P-F~~~~~~ei-~~~i~~~  270 (632)
                      .|+...+....               .  |.+..      -.+-|.=-||.++..+.||..- +......+. ...    
T Consensus       437 C~i~Dvl~~d~---------------~--~~le~------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~----  489 (655)
T KOG3741|consen  437 CGIMDVLQEDP---------------T--EPLES------QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR----  489 (655)
T ss_pred             ccceeeecCCC---------------C--cchhH------HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH----
Confidence            88765543321               0  11111      1366888999999999998543 333333332 222    


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                           +....+.+++++|.-+...++++ -++.+++.
T Consensus       490 -----I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp  520 (655)
T KOG3741|consen  490 -----ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLP  520 (655)
T ss_pred             -----hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence                 23567788999999999999987 45666654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.65  E-value=4.1e-07  Score=94.55  Aligned_cols=77  Identities=16%  Similarity=0.004  Sum_probs=63.7

Q ss_pred             CEEEEEEecCCC--CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-------CCcEEEE
Q 006772          121 GKICIAMKFYEG--SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-------HDQLVLG  191 (632)
Q Consensus       121 ~~l~LVmEy~~G--sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-------~g~vkL~  191 (632)
                      ...+||||+++|  ++.+++........+......++.+++..+.-||..||+|+||+++|||++.       +..+.|+
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI  187 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVI  187 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEE
Confidence            357899999998  5777764322345667778899999999999999999999999999999985       4689999


Q ss_pred             ecCCce
Q 006772          192 DFGIPY  197 (632)
Q Consensus       192 DFGlak  197 (632)
                      ||+.+.
T Consensus       188 Dl~r~~  193 (268)
T PRK15123        188 DLHRAQ  193 (268)
T ss_pred             ECCccc
Confidence            999764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=2.3e-08  Score=112.51  Aligned_cols=148  Identities=18%  Similarity=0.200  Sum_probs=106.6

Q ss_pred             HHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCceeccCC-CCCCCccc-----cccCCCccCCccccCCCCC
Q 006772          157 QLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR-SLSDSDMA-----LRLGTPNYMAPEQWEPEVR  229 (632)
Q Consensus       157 qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~-~~~~~~~~-----~~~GT~~YmAPE~~~~~~~  229 (632)
                      +++.||.|+|.. ++||++|.|++|.++.++..||+.|+++-...+. .+....+.     ...-...|.|||++...  
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~--  184 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT--  184 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc--
Confidence            445999999975 7999999999999999999999999987544331 11111111     11345789999999753  


Q ss_pred             CCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHh--hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          230 GPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI--KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       230 g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~--~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                       ..+.++|+||+||++|-+.. |+.-+........+.....  ......+...+|+++++-+.+++..|+..||++.+++
T Consensus       185 -~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  185 -TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             -cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence             45789999999999999984 5555554433322222221  1223345578999999999999999999999877665


Q ss_pred             H
Q 006772          307 H  307 (632)
Q Consensus       307 ~  307 (632)
                      .
T Consensus       264 ~  264 (700)
T KOG2137|consen  264 S  264 (700)
T ss_pred             c
Confidence            4

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.55  E-value=3e-07  Score=90.61  Aligned_cols=96  Identities=19%  Similarity=0.187  Sum_probs=60.0

Q ss_pred             HHHHHHhhhccCCC-ceeEeeEEEEECCEEEEEEecCC--CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHhCCc
Q 006772           95 NKFEELFPKFRESQ-SVCWLHGISVINGKICIAMKFYE--GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD-LHSIGL  170 (632)
Q Consensus        95 ~~~~~il~~l~~h~-~I~~l~~~~~~~~~l~LVmEy~~--GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~y-LHs~~I  170 (632)
                      +++...+.++.... +++.++.+  .  ..+|||||++  |..+..+...   .++......++.+++..+.. +|..||
T Consensus        56 ~~E~~~L~~l~~~Gv~vP~p~~~--~--~~~ivME~I~~~G~~~~~l~~~---~~~~~~~~~~~~~il~~~~~~~~~~gi  128 (188)
T PF01163_consen   56 KKEFRNLKRLYEAGVPVPKPYDY--N--RNVIVMEYIGEDGVPLPRLKDV---DLSPEEPKELLEEILEEIIKMLHKAGI  128 (188)
T ss_dssp             HHHHHHHHHCCCTT-SS--EEEE--E--TTEEEEE--EETTEEGGCHHHC---GGGGSTHHHHHHHHHHHHHHHHHCTTE
T ss_pred             HHHHHHHHHHHHCCccCCcEEEE--e--CCEEEEEecCCCccchhhHHhc---cccchhHHHHHHHHHHHHHHHHHhcCc
Confidence            33445556665442 45555433  2  3368999999  7555444432   22244566777788885555 579999


Q ss_pred             eeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          171 LVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       171 vHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      +|+||.+.|||++++ .+.++|||.+..
T Consensus       129 vHGDLs~~NIlv~~~-~~~iIDf~qav~  155 (188)
T PF01163_consen  129 VHGDLSEYNILVDDG-KVYIIDFGQAVD  155 (188)
T ss_dssp             EESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred             eecCCChhhEEeecc-eEEEEecCccee
Confidence            999999999999987 999999997754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.34  E-value=7.9e-06  Score=81.49  Aligned_cols=75  Identities=24%  Similarity=0.302  Sum_probs=63.5

Q ss_pred             EEEEEEecCCC--CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cEEEEecCCc
Q 006772          122 KICIAMKFYEG--SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIP  196 (632)
Q Consensus       122 ~l~LVmEy~~G--sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~vkL~DFGla  196 (632)
                      ..+||||+++|  +|.+++....  ..+......++.+++..+.-||..||+|+|+++.|||++.++   .+.|+||+-+
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~  168 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRM  168 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhc
Confidence            56899999997  5666665432  266777889999999999999999999999999999999887   8999999976


Q ss_pred             ee
Q 006772          197 YL  198 (632)
Q Consensus       197 k~  198 (632)
                      +.
T Consensus       169 ~~  170 (206)
T PF06293_consen  169 RF  170 (206)
T ss_pred             ee
Confidence            54

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.29  E-value=3.5e-06  Score=86.48  Aligned_cols=132  Identities=17%  Similarity=0.214  Sum_probs=86.5

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh----------------------HHHHHHHHHHHhhh
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC----------------------AKVFVNKFEELFPK  103 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~----------------------~~~~~~~~~~il~~  103 (632)
                      .++..||-|-=+.||.|.+.+.       .++|||.=+- ....                      .....+++.+.+..
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g-------~~~~vKfHR~-GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~  165 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKG-------RKVAVKFHRL-GRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQR  165 (304)
T ss_pred             hhccccccCccceEEEEECCCC-------CEEEEEEeec-CchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHH
Confidence            4568999999999999986532       4899997321 1110                      01111222233444


Q ss_pred             ccCC-CceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          104 FRES-QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       104 l~~h-~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      +... -.++...    ..+...+||||++|-.+..+      +++....-.++..|+.-+.-+-..||||+|+.+=|||+
T Consensus       166 L~~~G~~VP~P~----~~nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV  235 (304)
T COG0478         166 LYPEGVKVPKPI----AWNRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV  235 (304)
T ss_pred             hhhcCCCCCCcc----ccccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE
Confidence            4322 1233322    33677899999999433221      22345555666777777777778999999999999999


Q ss_pred             ecCCcEEEEecCC
Q 006772          183 SEHDQLVLGDFGI  195 (632)
Q Consensus       183 d~~g~vkL~DFGl  195 (632)
                      +++|.+.++||--
T Consensus       236 ~~dg~~~vIDwPQ  248 (304)
T COG0478         236 TEDGDIVVIDWPQ  248 (304)
T ss_pred             ecCCCEEEEeCcc
Confidence            9999999999973

>PRK09902 hypothetical protein; Provisional

Probab=98.13  E-value=7.4e-05  Score=74.77  Aligned_cols=77  Identities=12%  Similarity=-0.006  Sum_probs=64.0

Q ss_pred             CEEEEEEecCCC--CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc--EEEEecCCc
Q 006772          121 GKICIAMKFYEG--SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ--LVLGDFGIP  196 (632)
Q Consensus       121 ~~l~LVmEy~~G--sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~--vkL~DFGla  196 (632)
                      -..+||+|-+.|  +|.+.+....-.+.+......++.+++..|.-||+.|+.|+|+-+.|||++..|.  ++++||--+
T Consensus        98 ~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~  177 (216)
T PRK09902         98 WRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS  177 (216)
T ss_pred             eEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence            357899999985  7777765432345677778899999999999999999999999999999997777  999999865


Q ss_pred             e
Q 006772          197 Y  197 (632)
Q Consensus       197 k  197 (632)
                      +
T Consensus       178 r  178 (216)
T PRK09902        178 R  178 (216)
T ss_pred             c
Confidence            4

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.12  E-value=1.6e-05  Score=89.61  Aligned_cols=141  Identities=19%  Similarity=0.263  Sum_probs=85.2

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH--------------------------HHHHHHH-----
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA--------------------------KVFVNKF-----   97 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~--------------------------~~~~~~~-----   97 (632)
                      ..|+.++-|.||.|+.+.       ++.||||+.++.-....                          ..+..++     
T Consensus       131 ~PiAsASIaQVH~A~L~s-------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~  203 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR  203 (517)
T ss_pred             CchhhhhHhhheeEEecC-------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence            679999999999999875       35899999876221100                          0011110     


Q ss_pred             --------H----HHhhhccCCCceeEeeEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 006772           98 --------E----ELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD  164 (632)
Q Consensus        98 --------~----~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~y  164 (632)
                              .    +......+.+.+....-+..-.+.-.|+|||++| .+.+.. ..+...++...+.....++  -+..
T Consensus       204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~-~l~~~g~d~k~ia~~~~~~--f~~q  280 (517)
T COG0661         204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA-ALKSAGIDRKELAELLVRA--FLRQ  280 (517)
T ss_pred             HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH-HHHhcCCCHHHHHHHHHHH--HHHH
Confidence                    0    1112222445544443333334566799999998 333332 1222344533332222222  1233


Q ss_pred             HHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       165 LHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +-..|+.|.|..|.||+++.+|++.+.|||+...+
T Consensus       281 ~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l  315 (517)
T COG0661         281 LLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL  315 (517)
T ss_pred             HHhcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence            33489999999999999999999999999987655

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.95  E-value=8.8e-05  Score=75.21  Aligned_cols=135  Identities=11%  Similarity=0.070  Sum_probs=74.8

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc-eeEeeEEEEECCEEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS-VCWLHGISVINGKICIAM  127 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~-I~~l~~~~~~~~~l~LVm  127 (632)
                      ..||+|..+.||+..    +      ..+++|...+....  ... .++.+.+..+..... ++..+.+....+...++|
T Consensus         7 ~~i~~G~t~~~y~~~----~------~~~VlR~~~~~~~~--~~i-~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~   73 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----T------GKWMLKLYNPGFDK--ETI-KREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIY   73 (226)
T ss_pred             eeecCCCCcceeEec----C------CCEEEEeCCCCCCH--HHH-HHHHHHHHHHHHcCCCCCceEEEEecCCeeeeee
Confidence            578999999999831    1      24778887653311  222 333334444433322 455566666777888999


Q ss_pred             ecCCCCH----------------HHHHHH----hcC---CCCCHHHHH-HHHH----------HHHH-HHHHHHh----C
Q 006772          128 KFYEGSV----------------GDRIAQ----QRG---GKLPLPDIL-RYGI----------QLAK-GISDLHS----I  168 (632)
Q Consensus       128 Ey~~GsL----------------~d~l~~----~~~---~~l~~~~~~-~ia~----------qIa~-gL~yLHs----~  168 (632)
                      |+++|..                ...+.+    ...   ...+..... .+..          ++.. ..++|.+    .
T Consensus        74 e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  153 (226)
T TIGR02172        74 ELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS  153 (226)
T ss_pred             eecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence            9999841                111111    000   111111111 0100          0111 1222221    2


Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++|+|+.|.||++++++ +.++||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            478999999999999888 9999999654

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.83  E-value=0.00041  Score=68.61  Aligned_cols=139  Identities=18%  Similarity=0.189  Sum_probs=72.8

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCC-ceeEeeEEE---EECCEE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-SVCWLHGIS---VINGKI  123 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~-~I~~l~~~~---~~~~~l  123 (632)
                      ++.|+.|..+.||+.....        +.+++|.....  . .......+..++..+..+. .++.++...   ......
T Consensus         2 i~~l~~G~~n~~~~v~~~~--------~~~vlK~~~~~--~-~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~   70 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--------GRYVLKFYRPP--D-AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFP   70 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--------SEEEEEEESSH--H-HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEE
T ss_pred             CccCCCCCeeeEEEEEECC--------cEEEEEEeCCC--C-CHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccc
Confidence            4689999999999998654        27999997654  1 1222233333333333221 244444433   334568


Q ss_pred             EEEEecCCCCHHHH-----------------HHHhc-----CCCCCHHH---------HHHH------------HHHHHH
Q 006772          124 CIAMKFYEGSVGDR-----------------IAQQR-----GGKLPLPD---------ILRY------------GIQLAK  160 (632)
Q Consensus       124 ~LVmEy~~GsL~d~-----------------l~~~~-----~~~l~~~~---------~~~i------------a~qIa~  160 (632)
                      +++|++++|.....                 +.+..     ...+....         ....            ...+..
T Consensus        71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (239)
T PF01636_consen   71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE  150 (239)
T ss_dssp             EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence            99999999843322                 11110     01111100         0000            111222


Q ss_pred             -HHHHHHh-------CCceeeeeeCCeEEEe-cCCcEEEEecCCce
Q 006772          161 -GISDLHS-------IGLLVLNLKPSNLLLS-EHDQLVLGDFGIPY  197 (632)
Q Consensus       161 -gL~yLHs-------~~IvHRDLKP~NILld-~~g~vkL~DFGlak  197 (632)
                       .++.++.       ..++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence             3334432       3599999999999999 66667899999654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.83  E-value=0.00016  Score=73.73  Aligned_cols=138  Identities=17%  Similarity=0.131  Sum_probs=85.6

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHH-----------------------HHHHHHHHHhhh
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK-----------------------VFVNKFEELFPK  103 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~-----------------------~~~~~~~~il~~  103 (632)
                      +...|..|-=+.||+|...       .+..+|+|+++........                       ...+++-..+.+
T Consensus        52 ~~g~istGKEA~Vy~a~~~-------~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R  124 (268)
T COG1718          52 LVGCISTGKEANVYLAETG-------DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKR  124 (268)
T ss_pred             eEeeecCCcceEEEeeccC-------CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3447888999999999742       2358999998653211100                       111111112222


Q ss_pred             cc-CCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEE
Q 006772          104 FR-ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLL  181 (632)
Q Consensus       104 l~-~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NIL  181 (632)
                      +. .+-.++..+.+    -...|||||+... +.-.-..+.-.+...++..+..++++.+.-|-. .++||+||..=|||
T Consensus       125 ~~eAGVrvP~Pi~~----~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL  199 (268)
T COG1718         125 AYEAGVRVPEPIAF----RNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNIL  199 (268)
T ss_pred             HHHcCCCCCCceee----cCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheE
Confidence            21 11122222222    2345899999743 111111122344455788889999999999988 89999999999999


Q ss_pred             EecCCcEEEEecCCce
Q 006772          182 LSEHDQLVLGDFGIPY  197 (632)
Q Consensus       182 ld~~g~vkL~DFGlak  197 (632)
                      +. ++.+.++|||-|-
T Consensus       200 ~~-~~~p~iID~~QaV  214 (268)
T COG1718         200 VH-DGEPYIIDVSQAV  214 (268)
T ss_pred             EE-CCeEEEEECcccc
Confidence            99 8999999999553

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.83  E-value=0.00029  Score=70.89  Aligned_cols=138  Identities=15%  Similarity=0.110  Sum_probs=83.1

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHH-----HHHHh---hhcc--CCCce
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK-----FEELF---PKFR--ESQSV  110 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~-----~~~il---~~l~--~h~~I  110 (632)
                      -..+|...+.+-......|.+-.-..        ..+++|..........+.+..-     ...++   ..+.  .....
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~~--------~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~  100 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEIDG--------KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEP  100 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEECC--------cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccc
Confidence            34678888888888888887765322        4789998765432222222111     01111   1111  12222


Q ss_pred             eEeeEEEEE-----CCEEEEEEecCCCC-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec
Q 006772          111 CWLHGISVI-----NGKICIAMKFYEGS-VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE  184 (632)
Q Consensus       111 ~~l~~~~~~-----~~~l~LVmEy~~Gs-L~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~  184 (632)
                      ..++.+...     ....+|+|||++|- +.+..      .+++    .++..+..+|.-||+.|+.|+|..|.|+++++
T Consensus       101 ~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~------~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  101 ADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIE------DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             ccceeeeeeeeccceeEEEEEEEEecCeecccch------hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC
Confidence            222222211     23566899999983 22221      1222    24467788899999999999999999999996


Q ss_pred             CCcEEEEecCCce
Q 006772          185 HDQLVLGDFGIPY  197 (632)
Q Consensus       185 ~g~vkL~DFGlak  197 (632)
                      + .++++||+..+
T Consensus       171 ~-~i~iID~~~k~  182 (229)
T PF06176_consen  171 N-GIRIIDTQGKR  182 (229)
T ss_pred             C-cEEEEECcccc
Confidence            5 49999998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.78  E-value=0.00018  Score=85.84  Aligned_cols=188  Identities=15%  Similarity=0.137  Sum_probs=122.8

Q ss_pred             hhccCCCceeEeeEEEEECC----EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeee
Q 006772          102 PKFRESQSVCWLHGISVING----KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK  176 (632)
Q Consensus       102 ~~l~~h~~I~~l~~~~~~~~----~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLK  176 (632)
                      .....|+|+..++.+....-    .+.+..+++.+ ++...+..  -+.++...++.+..++..||.|+|+....|.-|.
T Consensus       236 l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~--v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~  313 (1351)
T KOG1035|consen  236 LSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS--VGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLS  313 (1351)
T ss_pred             HHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh--ccccCHHHHHHHHHHHhhhHHHHHHhccceeEEe
Confidence            33457888888777765432    22344556654 44444433  3578999999999999999999999977777666


Q ss_pred             CC---eEEEecCCcEEEE--ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC
Q 006772          177 PS---NLLLSEHDQLVLG--DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG  251 (632)
Q Consensus       177 P~---NILld~~g~vkL~--DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG  251 (632)
                      ..   +-..+..+....+  ||+.++.+......    ....-+..|-++|..... ........|+|.+|..+..+..+
T Consensus       314 ~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~----~~~~~~~~~~~~e~~~~~-~~~~~r~~dL~~lgll~~~~~~~  388 (1351)
T KOG1035|consen  314 ASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS----FSDLLAEIRNADEDLKEN-TAKKSRLTDLWCLGLLLLQLSQG  388 (1351)
T ss_pred             cccccccccCccceeecchhhhcccccCCCcccc----hhhcCccccccccccccc-cchhhhhhHHHHHHHHHhhhhhc
Confidence            66   5555566666666  88887765332211    112235567788876533 22334457999999999999887


Q ss_pred             CCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       252 ~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+-.....           .....+........++..+|+..|+++|+++.+++.
T Consensus       389 ~~i~~~~~~-----------~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  389 EDISEKSAV-----------PVSLLDVLSTSELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             Ccccccccc-----------hhhhhccccchhhhhhhhhhcchhhhhccchhhhhh
Confidence            665211100           001112222237888999999999999999998876

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.67  E-value=0.00035  Score=70.99  Aligned_cols=29  Identities=10%  Similarity=-0.095  Sum_probs=25.7

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            48999999999999998888899999653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=97.48  E-value=0.00088  Score=80.39  Aligned_cols=82  Identities=15%  Similarity=0.144  Sum_probs=49.3

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCce--eEeeEEEEEC---CE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV--CWLHGISVIN---GK  122 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I--~~l~~~~~~~---~~  122 (632)
                      .+.|+.|.+..+|+......+    ..+.+++|+..+...........++..++..+..+.++  +.++.++.+.   +.
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~----~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~  118 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGG----SVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGT  118 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCC----cceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCC
Confidence            577899999999998764321    11357788764422111122334444555555444443  5556665543   56


Q ss_pred             EEEEEecCCCC
Q 006772          123 ICIAMKFYEGS  133 (632)
Q Consensus       123 l~LVmEy~~Gs  133 (632)
                      .|+||||++|.
T Consensus       119 ~flVME~v~G~  129 (822)
T PLN02876        119 AFYIMEYLEGR  129 (822)
T ss_pred             ceEEEEecCCc
Confidence            89999999984

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.40  E-value=0.0031  Score=62.83  Aligned_cols=131  Identities=18%  Similarity=0.266  Sum_probs=88.0

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-------------------hhhHHHHHHHHHHHh-hhccCC
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-------------------EDCAKVFVNKFEELF-PKFRES  107 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-------------------~~~~~~~~~~~~~il-~~l~~h  107 (632)
                      ...||+|+.=.||.-  ..       .....||++.+..                   .......+.....+. .....+
T Consensus         6 ~~~i~~G~~R~cy~H--P~-------dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~   76 (199)
T PF10707_consen    6 SDLIAQGGERDCYQH--PD-------DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDW   76 (199)
T ss_pred             CcccccCCCceEEEC--CC-------CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcc
Confidence            357899999999862  11       1357899987765                   222222233333333 334457


Q ss_pred             CceeEeeEEEEECCEEEEEEecCC---C----CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          108 QSVCWLHGISVINGKICIAMKFYE---G----SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       108 ~~I~~l~~~~~~~~~l~LVmEy~~---G----sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      .+|..++|+.+++--+.+|+|.+.   |    +|.+++.+   +.++. .   +...+-.-.+||-.++|+.+||+|.||
T Consensus        77 ~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NI  149 (199)
T PF10707_consen   77 SHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNI  149 (199)
T ss_pred             cccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-H---HHHHHHHHHHHHHHcCCeecCCCcccE
Confidence            789999999999988899999984   4    55555532   34555 3   333444556788899999999999999


Q ss_pred             EEecCC----cEEEEe-cC
Q 006772          181 LLSEHD----QLVLGD-FG  194 (632)
Q Consensus       181 Lld~~g----~vkL~D-FG  194 (632)
                      ++....    .+.|+| ||
T Consensus       150 v~~~~~~~~~~lvlIDG~G  168 (199)
T PF10707_consen  150 VVQRRDSGEFRLVLIDGLG  168 (199)
T ss_pred             EEEecCCCceEEEEEeCCC
Confidence            997443    577888 55

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.27  E-value=0.0017  Score=73.35  Aligned_cols=74  Identities=22%  Similarity=0.376  Sum_probs=52.1

Q ss_pred             CEEEEEEecCCC---CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec----CCcEEEEec
Q 006772          121 GKICIAMKFYEG---SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE----HDQLVLGDF  193 (632)
Q Consensus       121 ~~l~LVmEy~~G---sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~----~g~vkL~DF  193 (632)
                      ..-.|+||||+|   +..+.+.+   ..++..++...+.+...  +-+-..|++|.|=.|.||+++.    ++.+.+.||
T Consensus       275 t~RVLtME~~~G~~i~Dl~~i~~---~gi~~~~i~~~l~~~~~--~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDh  349 (538)
T KOG1235|consen  275 TKRVLTMEYVDGIKINDLDAIDK---RGISPHDILNKLVEAYL--EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDH  349 (538)
T ss_pred             cceEEEEEecCCccCCCHHHHHH---cCCCHHHHHHHHHHHHH--HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcc
Confidence            456799999998   33455543   35666655554444333  2233468999999999999994    668999999


Q ss_pred             CCceec
Q 006772          194 GIPYLL  199 (632)
Q Consensus       194 Glak~~  199 (632)
                      |+...+
T Consensus       350 Gl~~~i  355 (538)
T KOG1235|consen  350 GLYAVI  355 (538)
T ss_pred             cccccc
Confidence            987654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.22  E-value=4.3e-05  Score=85.96  Aligned_cols=187  Identities=18%  Similarity=0.134  Sum_probs=125.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc-eeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS-VCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~-I~~l~~~~~~~~  121 (632)
                      .-+.+.+-.++|+++++|+++...+.       ....+.+...      .-.+-..+++.++ +||| .+...+-++.+.
T Consensus       242 kws~~fh~fvK~altknpKkRptaek-------lL~h~fvs~~------l~~rl~~eLLdK~-n~P~~~v~~~~d~~~E~  307 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEK-------LLQHPFVSQT------LSRRLAIELLDKV-NNPNPVVRYLEDYDGED  307 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhh-------heeceeeccc------hhhHHHHHHHHHc-cCCCCcccccccCCccc
Confidence            34667788999999999998766543       2335544221      1122333555665 4566 444445555677


Q ss_pred             EEEEEEecCCCC--HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          122 KICIAMKFYEGS--VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~Gs--L~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ..+++|+++.+.  ..+.+.. ..-.+...+...+.+.-++++++||+.-=+|||    |||..+ +..++.||+....+
T Consensus       308 ~~~i~~~i~s~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L  381 (829)
T KOG0576|consen  308 YLWIPMRICSTGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQL  381 (829)
T ss_pred             ccchhhhhhcCCccccccCCh-hhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCccc
Confidence            889999999852  2222111 011233344555667778899999998888999    777765 78999999987665


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF  256 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~  256 (632)
                      ....    ...+..+|+.++|||+...   +.+....|+||++.--.+|.-|.+|-.
T Consensus       382 ~~~~----~~~t~~~~~~~~~pev~~~---~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  382 TRTM----KPRTAIGTPEPLAPEVIQE---NTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             Cccc----ccccCCCCCCCCCchhhcc---cccccCCCccCCCcchhhcCCCCCCCC
Confidence            4332    2345678999999998763   467889999999998778887877743

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.16  E-value=0.015  Score=58.05  Aligned_cols=126  Identities=21%  Similarity=0.295  Sum_probs=80.2

Q ss_pred             CCeEEEeEEcccCc-eEEEEEEEcCCCCCcccccEEEEEEecC---Cchh------------------hHHHHHHHHHHH
Q 006772           43 TSLKLKHRIGRGPF-GDVWLATHHQSADDFDEYHELAVKMLLP---LKED------------------CAKVFVNKFEEL  100 (632)
Q Consensus        43 ~~y~l~~~IG~G~F-G~VylA~~~~~~~~~~~~~~VAIK~l~~---~~~~------------------~~~~~~~~~~~i  100 (632)
                      .++++++.||.|.- |.||+++...        +.+|+|++..   ....                  ...-|..+. +.
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g--------~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~EC-RA  107 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDG--------RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCEC-RA  107 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECC--------eEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHH-Hh
Confidence            78999999999999 9999998643        4799999321   1110                  000112222 22


Q ss_pred             hhhcc--CCCce--eEeeEEEEEC------------------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHH
Q 006772          101 FPKFR--ESQSV--CWLHGISVIN------------------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL  158 (632)
Q Consensus       101 l~~l~--~h~~I--~~l~~~~~~~------------------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qI  158 (632)
                      +.++.  +++++  ++++|+..-.                  -...||.||....-          .+..    .-+.+|
T Consensus       108 fgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~----~~~~~~  173 (207)
T PF13095_consen  108 FGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI----RDIPQM  173 (207)
T ss_pred             hHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch----hHHHHH
Confidence            22222  33344  7777775322                  11347777776421          1222    234567


Q ss_pred             HHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       159 a~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+-|..+|..||+-+|+|+.|..     .-||+|||.+
T Consensus       174 ~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  174 LRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            78888999999999999999986     3489999953

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.07  E-value=0.0027  Score=61.80  Aligned_cols=130  Identities=15%  Similarity=0.173  Sum_probs=79.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      ..+..+.|++|++|.||++.++.        ..+|+|+-+..+.   ..-+..+.+++..+.....-..++.+.    ..
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~~--------~~~a~Kvrr~ds~---r~~l~kEakiLeil~g~~~~p~vy~yg----~~   87 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWRG--------GEVALKVRRRDSP---RRNLEKEAKILEILAGEGVTPEVYFYG----ED   87 (201)
T ss_pred             hhhhhhhhhcccccEEEEeeccC--------ceEEEEEecCCcc---hhhHHHHHHHHHHhhhcCCCceEEEec----hh
Confidence            34556889999999999998864        3799998765433   222344445454444433334444443    34


Q ss_pred             EEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeee-CCeEEEecCCcEEEEecCCce
Q 006772          124 CIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK-PSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       124 ~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLK-P~NILld~~g~vkL~DFGlak  197 (632)
                      ++.|||++| .|.+.....     +-    +-...++..---|-..||-|..|. |..++|-.++.+.|+||-.|+
T Consensus        88 ~i~me~i~G~~L~~~~~~~-----~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112          88 FIRMEYIDGRPLGKLEIGG-----DR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             hhhhhhhcCcchhhhhhcc-----cH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence            567999999 555443211     11    222334444334455789998886 444444455599999999775

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.77  E-value=0.0093  Score=60.39  Aligned_cols=29  Identities=28%  Similarity=0.287  Sum_probs=25.0

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++|+|+.|.|||+++++..-|+||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            48999999999999977666799999653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.68  E-value=0.0053  Score=60.54  Aligned_cols=96  Identities=17%  Similarity=0.208  Sum_probs=71.8

Q ss_pred             HHhhhccCCCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCceee
Q 006772           99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQ-RGGKLPLPDILRYGIQLAKGISDLHS---IGLLVL  173 (632)
Q Consensus        99 ~il~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~-~~~~l~~~~~~~ia~qIa~gL~yLHs---~~IvHR  173 (632)
                      .+++.+++.+++++++|.|   +. ++++||.. +++.+..... .-...+|..+.+++.+++..+++|+.   ..+.-.
T Consensus        11 lll~~l~~~~~~pk~lG~C---G~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lc   86 (188)
T PF12260_consen   11 LLLQLLQGSEPFPKLLGSC---GR-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLC   86 (188)
T ss_pred             HHHHHcCCCCCCCCeeeEC---CC-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEe
Confidence            4455666667899999988   33 46889998 4543211000 01246899999999999999999998   346668


Q ss_pred             eeeCCeEEEecCCcEEEEecCCcee
Q 006772          174 NLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       174 DLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      |++|+|+-++++|++|++|...+..
T Consensus        87 Dv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   87 DVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             ecchHHeEEeCCCcEEEEechhcch
Confidence            9999999999999999999986543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK05231 homoserine kinase; Provisional

Probab=96.68  E-value=0.043  Score=58.03  Aligned_cols=30  Identities=20%  Similarity=0.204  Sum_probs=25.7

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .+++|+|+.|.|||++.+...-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            479999999999999976666899999653

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.41  E-value=0.035  Score=58.60  Aligned_cols=38  Identities=24%  Similarity=0.311  Sum_probs=30.7

Q ss_pred             HHHHHHHHh-------CCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          159 AKGISDLHS-------IGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       159 a~gL~yLHs-------~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ...++++..       .+++|+|+.+.||+++.++...|+||+.+
T Consensus       171 ~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       171 DKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             HHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            345555543       57999999999999999887789999964

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.38  E-value=0.023  Score=57.16  Aligned_cols=29  Identities=14%  Similarity=0.188  Sum_probs=25.7

Q ss_pred             CceeeeeeCCeEEEec-CCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSE-HDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~-~g~vkL~DFGlak  197 (632)
                      .++|+|+.+.|||++. ++.+.|+||-.|.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            5899999999999998 5789999998653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10593 hypothetical protein; Provisional

Probab=96.24  E-value=0.065  Score=56.62  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=48.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCC--CceeEeeEEEEE--
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRES--QSVCWLHGISVI--  119 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h--~~I~~l~~~~~~--  119 (632)
                      ...-.+.||.|..+.||......        ..+.+|..+....   ..++..+...+..+...  -.++.+++++..  
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~--------~~~~~k~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~   83 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQ--------GNPMPLMARSFST---PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ   83 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCC--------CCEEEEEeccccc---chHHHHHHHHHHHHccCCCCCcCcEEEEeccCC
Confidence            34456789999999999986432        1467777533111   22334444444444443  245666666543  


Q ss_pred             -CCEEEEEEecCCCC
Q 006772          120 -NGKICIAMKFYEGS  133 (632)
Q Consensus       120 -~~~l~LVmEy~~Gs  133 (632)
                       .+..+||||+++|.
T Consensus        84 ~~g~~~LVmE~i~G~   98 (297)
T PRK10593         84 SPGPDVLLLERLRGV   98 (297)
T ss_pred             cCCCeEEEEeccCCE
Confidence             46789999999873

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.10  E-value=0.018  Score=59.09  Aligned_cols=28  Identities=21%  Similarity=0.319  Sum_probs=24.7

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++|+|+.|.|||+++++ +.|+||..|.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            489999999999999877 7899999664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.01  E-value=0.097  Score=57.66  Aligned_cols=76  Identities=16%  Similarity=0.083  Sum_probs=44.3

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc----h---hhHHHHHHHHHHHhhhccC--CCceeEeeEEEE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK----E---DCAKVFVNKFEELFPKFRE--SQSVCWLHGISV  118 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~----~---~~~~~~~~~~~~il~~l~~--h~~I~~l~~~~~  118 (632)
                      .+.||.|.+..||++......      +.|.||.-.+..    .   ..... ...+.+.+..+..  ..+++.++.+  
T Consensus        31 ~~elggGn~N~VyrV~~~~g~------~svIVKqa~p~~r~~g~~wpl~~eR-~~~Eae~L~~l~~~~p~~VPkV~~~--  101 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGG------KSVIVKQALPYVRVVGESWPLTLDR-ARIEAEALKIQAKYVPDLVPKVYHY--  101 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCC------eEEEEEecCcccccccccccccHHH-HHHHHHHHHHHHhhCCCCCCeEEEE--
Confidence            567999999999999875321      369999854321    1   11122 2222233333222  2345566554  


Q ss_pred             ECCEEEEEEecCCC
Q 006772          119 INGKICIAMKFYEG  132 (632)
Q Consensus       119 ~~~~l~LVmEy~~G  132 (632)
                      +.+..++||||+++
T Consensus       102 D~~~~~lVME~L~~  115 (401)
T PRK09550        102 DEELAVTVMEDLSD  115 (401)
T ss_pred             CCCCCEEEEecCCC
Confidence            44567899999874

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=95.87  E-value=0.0086  Score=63.42  Aligned_cols=131  Identities=18%  Similarity=0.252  Sum_probs=82.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHH----------------------HHHHHHHhh
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF----------------------VNKFEELFP  102 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~----------------------~~~~~~il~  102 (632)
                      +.++..||-|-=+.||.+-+...       ++.++|.- .........+                      ..++-..++
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G-------~~~~lK~H-RLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmk  165 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEG-------NPLILKLH-RLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMK  165 (465)
T ss_pred             hhhccccccccccceEEEecCCC-------CchhHHHH-hhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHH
Confidence            55678999999999999976533       36777752 2111111110                      111112234


Q ss_pred             hccCCCcee-EeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEE
Q 006772          103 KFRESQSVC-WLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLL  181 (632)
Q Consensus       103 ~l~~h~~I~-~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NIL  181 (632)
                      .+..|.+-+ ..    .+.+..|+|||++.|-.+-.+.+       ...+..+...++.-|--|-.+|+||+|..-=||+
T Consensus       166 aL~e~gfpVPkp----iD~~RH~Vvmelv~g~Pl~~v~~-------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNim  234 (465)
T KOG2268|consen  166 ALYERGFPVPKP----IDHNRHCVVMELVDGYPLRQVRH-------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIM  234 (465)
T ss_pred             HHHHcCCCCCCc----ccccceeeHHHhhcccceeeeee-------cCChHHHHHHHHHHHHHHHHcCceecccchheeE
Confidence            443333221 11    23467899999999833322221       1223344556666677788999999999999999


Q ss_pred             EecCCcEEEEecC
Q 006772          182 LSEHDQLVLGDFG  194 (632)
Q Consensus       182 ld~~g~vkL~DFG  194 (632)
                      +++++.++++||-
T Consensus       235 v~dd~~i~vIDFP  247 (465)
T KOG2268|consen  235 VKDDDKIVVIDFP  247 (465)
T ss_pred             EecCCCEEEeech
Confidence            9999999999997

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.76  E-value=0.091  Score=54.82  Aligned_cols=29  Identities=21%  Similarity=0.252  Sum_probs=25.9

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+++|+|+.|.|||+++++.+.|+||+.+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            46999999999999999877899999964

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PLN02236 choline kinase

Probab=95.52  E-value=0.15  Score=55.07  Aligned_cols=29  Identities=17%  Similarity=0.351  Sum_probs=25.3

Q ss_pred             CceeeeeeCCeEEEec-CCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSE-HDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~-~g~vkL~DFGlak  197 (632)
                      .++|+|+++.|||+++ ++.+.|+||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            5899999999999986 4689999999653

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.19  E-value=0.18  Score=52.89  Aligned_cols=28  Identities=32%  Similarity=0.376  Sum_probs=25.3

Q ss_pred             CceeeeeeCCeEEEecC----CcEEEEecCCc
Q 006772          169 GLLVLNLKPSNLLLSEH----DQLVLGDFGIP  196 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~----g~vkL~DFGla  196 (632)
                      .++|.|+.|.|||++++    +.+.|+||..|
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            58999999999999985    88999999965

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.67  E-value=0.23  Score=54.00  Aligned_cols=29  Identities=24%  Similarity=0.326  Sum_probs=23.7

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..++|+||.+.|||+++++ ++++|+.++.
T Consensus       192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~  220 (370)
T TIGR01767       192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAF  220 (370)
T ss_pred             ceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence            3589999999999997754 7799988653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.55  E-value=0.0034  Score=76.92  Aligned_cols=180  Identities=13%  Similarity=-0.003  Sum_probs=111.6

Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-----CceeeeeeCCeEEEecCCcEEEE
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRG--GKLPLPDILRYGIQLAKGISDLHSI-----GLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~--~~l~~~~~~~ia~qIa~gL~yLHs~-----~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +...++.|+|+. |.+.+.+.....  ..+...-+.....+...+..-+|+.     -.+|++||+-|.+|..+..+|++
T Consensus      1303 s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~g 1382 (2724)
T KOG1826|consen 1303 STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLG 1382 (2724)
T ss_pred             ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccc
Confidence            345678899998 677777765422  2222333333334447777777764     27999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      ++|+.+.....   ..-.....+++.|+.|++...   -.++.++|+|..++.+|+...|..+|-.-... +...++...
T Consensus      1383 k~gLdKIknp~---~sf~Gl~l~sp~~v~qli~N~---ik~t~rsdilr~s~~ly~rs~~n~~fi~flq~-~Lkgiidn~ 1455 (2724)
T KOG1826|consen 1383 KGGLDKIKNPV---LSFFGLELCSPIYVLQLIKNE---IKFTKRSDILRRSLSLYLRSDGNAYFIFFLQP-ALKGIIDNH 1455 (2724)
T ss_pred             ccccccccCch---HhhhhhhhCCHHHHHHHHHHH---HhhhhHHHHHHHHHHHHHHhcccHHHHHHHHH-HHcCccccc
Confidence            99998832221   112234577899999999863   35777899999999999998888886322111 111122222


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                      ....++.-.|.+.-.....+|-..-..||.-...+
T Consensus      1456 tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isl 1490 (2724)
T KOG1826|consen 1456 TFFSIEKLKPGDANVEALHRLLWKYMERPGQYISL 1490 (2724)
T ss_pred             ccccccccCCCcccHHHHHHHHHHhhhcchhhhhc
Confidence            22223333334433344444444455666544433

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=94.34  E-value=0.41  Score=51.35  Aligned_cols=27  Identities=30%  Similarity=0.381  Sum_probs=24.1

Q ss_pred             ceeeeeeCCeEEEec-CCcEEEEecCCc
Q 006772          170 LLVLNLKPSNLLLSE-HDQLVLGDFGIP  196 (632)
Q Consensus       170 IvHRDLKP~NILld~-~g~vkL~DFGla  196 (632)
                      ++|.||.+.|||+++ ++.++++||..|
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYa  211 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYG  211 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEccccc
Confidence            799999999999975 578999999965

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.05  E-value=0.4  Score=51.99  Aligned_cols=139  Identities=17%  Similarity=0.176  Sum_probs=86.8

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-------------------------hhhHHHHHHHHHHH
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-------------------------EDCAKVFVNKFEEL  100 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-------------------------~~~~~~~~~~~~~i  100 (632)
                      .+-.+|..|-=+.||.|.-...       ..+|||+++..-                         ..-.+....++...
T Consensus       147 ~inGCiSTGKEANVYHat~~dG-------~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RN  219 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDG-------SEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRN  219 (520)
T ss_pred             ecccccccCccceeEeeecCCC-------ceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHH
Confidence            3456888899999999875432       469999976410                         00111222333333


Q ss_pred             hhhccCCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCe
Q 006772          101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSN  179 (632)
Q Consensus       101 l~~l~~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~N  179 (632)
                      +.++.... |+...-+..  ....|||+|+.++-.- .-.++...++...+..+-.|++.-+.-|.. .++||.||.-=|
T Consensus       220 LkRl~~aG-IP~PePIlL--k~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  220 LKRLNNAG-IPCPEPILL--KNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             HHHHHhcC-CCCCCceee--ecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            44432211 111111111  1235899999742111 111234578888899999999999988876 589999999999


Q ss_pred             EEEecCCcEEEEecCCc
Q 006772          180 LLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       180 ILld~~g~vkL~DFGla  196 (632)
                      +|+-+ |.+.++|.+-+
T Consensus       296 ~Lyhd-G~lyiIDVSQS  311 (520)
T KOG2270|consen  296 LLYHD-GKLYIIDVSQS  311 (520)
T ss_pred             heEEC-CEEEEEEcccc
Confidence            99865 89999998744

>PLN02756 S-methyl-5-thioribose kinase

Probab=93.86  E-value=0.63  Score=51.44  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=42.8

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-------hhHHHHHHHHHHHhhhcc--CCCceeEeeEEE
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-------DCAKVFVNKFEELFPKFR--ESQSVCWLHGIS  117 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-------~~~~~~~~~~~~il~~l~--~h~~I~~l~~~~  117 (632)
                      -.+.||.|....||+..+..        +.++||.-.+...       ........+ ...+....  ....++.++.++
T Consensus        36 ~~~eiggGn~N~VyrV~~~~--------~svVVKqa~p~~r~vga~wpl~~~R~~~E-a~aL~~~~~~~p~~VPkVy~~d  106 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSSS--------GSFVIKQALPYIRCIGESWPMTKERAYFE-ATALREHGRLCPDHVPEVYHFD  106 (418)
T ss_pred             eEEEcCCCceeeEEEEEcCC--------ccEEEEeCCccccCCCccccCCccHHHHH-HHHHHHhhhcCCCCCCeEEEEC
Confidence            47789999999999987521        2588998652111       011111111 22222222  123566666665


Q ss_pred             EECCEEEEEEecCCC
Q 006772          118 VINGKICIAMKFYEG  132 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G  132 (632)
                      .  +..+++|||+++
T Consensus       107 e--d~~vlvME~L~~  119 (418)
T PLN02756        107 R--TMALIGMRYLEP  119 (418)
T ss_pred             C--CCCEEEEeecCC
Confidence            4  556788999975

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=93.04  E-value=0.68  Score=48.42  Aligned_cols=29  Identities=24%  Similarity=0.289  Sum_probs=24.4

Q ss_pred             CceeeeeeCCeEEEecCCc-EEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQ-LVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~-vkL~DFGlak  197 (632)
                      .++|+|++|.|||+++++. .-|+||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            4899999999999997555 5699999764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PTZ00384 choline kinase; Provisional

Probab=92.40  E-value=1.6  Score=47.97  Aligned_cols=28  Identities=18%  Similarity=0.141  Sum_probs=23.2

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ...+|-||-+.|||.++ +.+.++||-.|
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA  254 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFDFA  254 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEeccc
Confidence            45799999999999764 56999999854

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=92.10  E-value=0.43  Score=51.70  Aligned_cols=73  Identities=16%  Similarity=0.078  Sum_probs=56.3

Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      +.+.|++|++..+++.- +     ....+++++.++.+.+.-+.-+..+ ..=|||+.-.||||+ +|++.|+||-+++.
T Consensus       298 ~~y~yl~~kdhgt~is~-i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         298 TLYLYLHFKDHGTPISI-I-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             ceEEEEEEecCCceeee-e-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            34677888887765442 2     1345778888888877777777664 589999999999999 89999999999985


Q ss_pred             c
Q 006772          199 L  199 (632)
Q Consensus       199 ~  199 (632)
                      -
T Consensus       371 ~  371 (488)
T COG5072         371 S  371 (488)
T ss_pred             c
Confidence            3

>PRK12396 5-methylribose kinase; Reviewed

Probab=91.70  E-value=0.79  Score=50.49  Aligned_cols=27  Identities=11%  Similarity=0.150  Sum_probs=23.0

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..+|+||.|.|||++++ .+|++|.-++
T Consensus       228 aLlHGDlHtGSI~v~~~-~~kvIDpEFA  254 (409)
T PRK12396        228 ALIHGDLHTGSVFVKND-STKVIDPEFA  254 (409)
T ss_pred             hhccCcCCCCCEEecCC-ceEEEccccc
Confidence            48999999999999975 5889987655

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=91.65  E-value=2.5  Score=44.62  Aligned_cols=76  Identities=9%  Similarity=0.030  Sum_probs=39.7

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhc--cCCCceeEeeEEEEECCE
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF--RESQSVCWLHGISVINGK  122 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l--~~h~~I~~l~~~~~~~~~  122 (632)
                      .+-.+.|+.|....+|+...  .      .+.+-||+-.....    .++..+.+-++.+  ...-.++..+.+...++.
T Consensus        19 i~~~~~v~GG~i~~a~~~~~--~------~~~~FvK~~~~~~~----~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~   86 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLDT--D------GGSYFVKVNSESGR----DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD   86 (288)
T ss_dssp             --EEEEE--SSSSEEEEEET--T------S-EEEEEEEEGGGC----CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC
T ss_pred             eeeeEecCCCChhheEEEEC--C------CccEEEEecChhhH----HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC
Confidence            55677899899999998761  1      14788898652211    1122222223333  234456778888877777


Q ss_pred             EEEEEecCCC
Q 006772          123 ICIAMKFYEG  132 (632)
Q Consensus       123 l~LVmEy~~G  132 (632)
                      .||+|||++.
T Consensus        87 ~fLlle~l~~   96 (288)
T PF03881_consen   87 AFLLLEFLEM   96 (288)
T ss_dssp             CEEEEE----
T ss_pred             ceEEEEeecC
Confidence            8999999873

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.40  E-value=2.1  Score=45.88  Aligned_cols=31  Identities=19%  Similarity=0.234  Sum_probs=27.7

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      .++|+|+.+.|++++.++-+=|.||+++...
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            3799999999999999999999999987653

>PRK11768 serine/threonine protein kinase; Provisional

Probab=90.25  E-value=5.7  Score=42.45  Aligned_cols=27  Identities=19%  Similarity=0.124  Sum_probs=22.8

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .++||+|+.+.|||++ + .+.|+||+-+
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~  222 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDA  222 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCC
Confidence            3689999999999995 3 5789999954

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=90.17  E-value=0.61  Score=52.51  Aligned_cols=73  Identities=18%  Similarity=0.198  Sum_probs=47.8

Q ss_pred             cccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC----------CCCCCCCHHHHHHHHHhhhcCcCCCCCHH
Q 006772          234 FETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP----------CIPSGLPPAVENVIIGCFEYDLRNRPLMA  303 (632)
Q Consensus       234 ~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p----------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~  303 (632)
                      .++||||+|.++.|+.-|..-|......+....+..-...+          .+.-.++..+.++..+|+-..|..||...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            49999999999999999887766544333222221100000          11124566778899999999999998765


Q ss_pred             HHH
Q 006772          304 DIL  306 (632)
Q Consensus       304 ell  306 (632)
                      ++.
T Consensus       190 ~~~  192 (725)
T KOG1093|consen  190 ELS  192 (725)
T ss_pred             HHh
Confidence            544

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=89.51  E-value=0.65  Score=51.05  Aligned_cols=61  Identities=13%  Similarity=0.160  Sum_probs=38.9

Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCceeeeeeCCeEEEecCC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH-SIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLH-s~~IvHRDLKP~NILld~~g  186 (632)
                      ..|+-+|.+| ++..++..   ...++....+++.--+.||--+- -.+++|.|+.|.||++.-+.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~---~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKW---KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             ceeeeeccccccHHhhhhc---ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            4566667777 44444433   24455556666655555554433 46899999999999997544

>PRK06148 hypothetical protein; Provisional

Probab=89.08  E-value=5.7  Score=49.21  Aligned_cols=30  Identities=23%  Similarity=0.351  Sum_probs=25.3

Q ss_pred             CCceeeeeeCCeEEEecCC--cEE-EEecCCce
Q 006772          168 IGLLVLNLKPSNLLLSEHD--QLV-LGDFGIPY  197 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g--~vk-L~DFGlak  197 (632)
                      +++||.|+.+.|||++.++  .+. |+|||-+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            4699999999999999875  555 99999653

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=89.03  E-value=0.68  Score=48.47  Aligned_cols=28  Identities=21%  Similarity=0.322  Sum_probs=24.7

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+++|+|+.+.|||++. +.+.|+||+.+
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            47899999999999998 67899999954

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK10271 thiK thiamine kinase; Provisional

Probab=84.68  E-value=0.66  Score=45.83  Aligned_cols=28  Identities=25%  Similarity=0.272  Sum_probs=24.5

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      -.+|+|+.|.||++++++ ++|+||+.+.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            369999999999998877 8899999764

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=84.64  E-value=1.1  Score=48.20  Aligned_cols=62  Identities=18%  Similarity=0.189  Sum_probs=33.9

Q ss_pred             EEEEecCCCCHHHHHHHhc---CCCCCH-HHHHHHHHHHHHHHHHHHh----CCceeeeeeCCeEEEecCC
Q 006772          124 CIAMKFYEGSVGDRIAQQR---GGKLPL-PDILRYGIQLAKGISDLHS----IGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       124 ~LVmEy~~GsL~d~l~~~~---~~~l~~-~~~~~ia~qIa~gL~yLHs----~~IvHRDLKP~NILld~~g  186 (632)
                      .||+++..++.. .+....   .|-.+. +-++.+..|+|.-.--.-.    .+.+|-||||.|||+-++.
T Consensus       247 IIIfPLA~~Sad-kv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  316 (434)
T PF05445_consen  247 IIIFPLARCSAD-KVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSK  316 (434)
T ss_pred             EEEEehhhcchh-hcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCC
Confidence            478888875422 221111   111122 2344556666543311222    4689999999999996544

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>smart00743 Agenet Tudor-like domain present in plant sequences

Probab=82.80  E-value=1.8  Score=34.19  Aligned_cols=38  Identities=21%  Similarity=0.327  Sum_probs=32.6

Q ss_pred             ecccceEEEecccccCccccccccCCCccccceEEEEeeCCeEEEecCC
Q 006772          467 AYYVGQFVRVGANVFTPRFEWPRKRGGEWATGKILQVLPNGCLVVGFPG  515 (632)
Q Consensus       467 ~~~~g~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (632)
                      .+++|+.|.++-.-           .|+|-.|+|..++++++..|.|++
T Consensus         2 ~~~~G~~Ve~~~~~-----------~~~W~~a~V~~~~~~~~~~V~~~~   39 (61)
T smart00743        2 DFKKGDRVEVFSKE-----------EDSWWEAVVTKVLGDGKYLVRYLT   39 (61)
T ss_pred             CcCCCCEEEEEECC-----------CCEEEEEEEEEECCCCEEEEEECC
Confidence            46789988887431           789999999999998999999998

Domain in plant sequences with possible chromatin-associated functions.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=81.94  E-value=2  Score=42.62  Aligned_cols=30  Identities=23%  Similarity=0.346  Sum_probs=21.4

Q ss_pred             CceeeeeeCCeEEE-ecCCcEEEEecCCcee
Q 006772          169 GLLVLNLKPSNLLL-SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       169 ~IvHRDLKP~NILl-d~~g~vkL~DFGlak~  198 (632)
                      .++|.||.|.|||+ +.++.++|+||-.|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            48999999999999 8899999999997754

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=80.55  E-value=2  Score=44.80  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHhC--CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          155 GIQLAKGISDLHSI--GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       155 a~qIa~gL~yLHs~--~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      +..+-.++.-.|..  -++|.|+.|+|+|.++.+.++|+||--|.
T Consensus       138 ~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         138 LKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             HHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            33444444444444  48999999999999999999999998664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	632
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-13
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-13
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-12
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-11
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-11
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		5e-11
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-11
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		5e-11
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-11
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		6e-11
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		6e-11
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		6e-11
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		8e-11
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-11
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-10
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-10
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-10
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-10
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-10
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-10
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-10
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-10
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-10
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-10
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-10
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-10
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-10
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-10
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-10
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-10
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-10
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-10
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-10
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-10
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-10
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-10
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		7e-10
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-09
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		6e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-08
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-08
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-08
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-08
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-08
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-08
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-08
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-08
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-08
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-08
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-08
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-08
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-08
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-08
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-08
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-08
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		5e-08
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-08
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-08
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-08
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-08
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-08
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-08
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		7e-08
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-08
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-08
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		8e-08
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-08
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		8e-08
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		9e-08
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-07
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-07
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-07
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-07
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-07
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-07
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-07
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-07
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-07
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-07
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-07
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-07
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		3e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		3e-07
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-07
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-07
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-07
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-07
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		5e-07
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		6e-07
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		7e-07
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		8e-07
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		8e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		8e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-07
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-06
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-06
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-06
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-06
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-06
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-06
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-06
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-06
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-06
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-06
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-06
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-06
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-06
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-06
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-06
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-06
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-06
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-06
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		2e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-06
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-06
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-06
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-06
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-06
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-06
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-06
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		4e-06
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-06
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-06
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-06
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		4e-06
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-06
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-06
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		5e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		5e-06
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		6e-06
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		6e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		6e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		6e-06
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		6e-06
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-06
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		7e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		7e-06
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-06
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		8e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		8e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		8e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		8e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		8e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-05
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-05
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-05
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		4e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		4e-05
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		5e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		6e-05
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		6e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		6e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		6e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		7e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		7e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		7e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		7e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		8e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		8e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		8e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		8e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		9e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		9e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		9e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		9e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		9e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-04
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		1e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-04
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-04
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		5e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		5e-04
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		6e-04
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		6e-04
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		7e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		7e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		9e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		9e-04

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 126/298 (42%), Gaps = 35/298 (11%)
Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P      
Sbjct: 176 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 223
Query: 91  KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
            + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D +    G K P
Sbjct: 224 SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
           LP ++ +  Q+A+G++ +                        + DFG     L R + D+
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDN 337
Query: 208 DMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           +   R G      + APE       G  + ++D W FG  +ME++T G  P+ G S  E+
Sbjct: 338 EYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 394
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE 321
             ++      P  P   P  + N+++ C++     RP    I    +    A  +  E
Sbjct: 395 IRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXE 451

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 38/290 (13%)
Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P      
Sbjct: 3   KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 50
Query: 91  KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
            + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D +    G K P
Sbjct: 51  SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 109
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
           LP ++ +  Q+A+G++ +                        + DFG     L R + D+
Sbjct: 110 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDN 164
Query: 208 DMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           +   R G      + APE       G  + ++D W FG  +ME++T G  P+ G S  E+
Sbjct: 165 EYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 221
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFE 310
             ++      P  P   P  + N+++ C++     RP    +  +L  FE
Sbjct: 222 IRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           PW D   L +K +IG G FG V  A  H S        ++AVK+L+  ++D     VN+F
Sbjct: 35  PWCD---LNIKEKIGAGSFGTVHRAEWHGS--------DVAVKILM--EQDFHAERVNEF 81
Query: 98  EE---LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY 154
                +  + R    V ++  ++       +      GS+  R+  + G +  L +  R 
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRL 140
Query: 155 GI--QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG--DFGIPYLLLGRSLSDSDMA 210
            +   +AKG++ LH+                   +  +   DFG+  L     LS    A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
              GTP +MAPE    E   P + ++D + FG  + E+ T  QPW   +  ++  +V  K
Sbjct: 201 ---GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            ++  IP  L P V  +I GC+  +   RP  A I+
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 24/270 (8%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GNMSPEAFLQE-AQVMKK 236
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 237 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 295
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     LGR + D++   R G      P +
Sbjct: 296 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LGRLIEDNEYTARQGAK---FPIK 347
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 406
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            P ++ +++  C+  D   RP   + L AF
Sbjct: 407 CPESLHDLMCQCWRKDPEERPTF-EYLQAF 435

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           PW D   L +K +IG G FG V  A  H S        ++AVK+L+  ++D     VN+F
Sbjct: 35  PWCD---LNIKEKIGAGSFGTVHRAEWHGS--------DVAVKILM--EQDFHAERVNEF 81
Query: 98  EE---LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY 154
                +  + R    V ++  ++       +      GS+  R+  + G +  L +  R 
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRL 140
Query: 155 GI--QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG--DFGIPYLLLGRSLSDSDMA 210
            +   +AKG++ LH+                   +  +   DFG+  L     L     A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
              GTP +MAPE    E   P + ++D + FG  + E+ T  QPW   +  ++  +V  K
Sbjct: 201 ---GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            ++  IP  L P V  +I GC+  +   RP  A I+
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 49/298 (16%)
Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AVK + P      
Sbjct: 170 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 217
Query: 91  KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
            + V  F  E    K  +   +  LH + V    I I  +F  +GS+ D +    G K P
Sbjct: 218 SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 276
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
           LP ++ +  Q+A+G++ +                  E    +  D     +L+  SL   
Sbjct: 277 LPKLIDFSAQIAEGMAFI------------------EQRNYIHRDLRAANILVSASLVCK 318
Query: 208 DMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
                L       P +W  PE    G  + ++D W FG  +ME++T G  P+ G S  E+
Sbjct: 319 IADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 378
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE 321
             ++      P  P   P  + N+++ C+    +NRP         +S  +  Y   E
Sbjct: 379 IRALERGYRMPR-PENCPEELYNIMMRCW----KNRPEERPTFEYIQSVLDDFYTATE 431

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R  + V  L+ + V    I I +++  +GS+ D +  + G  L LP ++    Q+A G+
Sbjct: 70  LRHEKLV-QLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +  +               E+    + DFG     L R + D++   R G      P 
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEXTARQGAK---FPI 179
Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P 
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 238
Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
             P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 28/286 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R  + V  L+ + V    I I M++  +G + D +  + G  L LP ++    Q+A G+
Sbjct: 70  LRHEKLV-QLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +  +               E+    + DFG     L R + D++   R G      P 
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPI 179
Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P 
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 238
Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
             P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
            R  + V  L+ + V    I I +++  +GS+ D +  + G  L LP ++    Q+A G+
Sbjct: 70  LRHEKLV-QLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           + +  +               E+    + DFG     L R + D++   R G      P 
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPI 179
Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P 
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 238
Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
             P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 8   SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 58
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 59  LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 169
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 228
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 273

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 70  LRHEKLV-QLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 70  LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 129 YVERMNYVHRDLAAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 70  LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 70  IRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 10  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 60
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 61  LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 171
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 230
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 275

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 99  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 158 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 209
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP    +
Sbjct: 210 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
Query: 306 LHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTV 355
                 +Q              RAL D           P K H+Q+ D +
Sbjct: 270 RDFLLEAQPT----------DMRALQDFEE--------PDKLHIQMNDVI 301

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 37/298 (12%)
Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      I   S+KL  R+G G FG+VW+  ++ S        ++AVK L P      
Sbjct: 1   KPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNST-------KVAVKTLKP-----G 48
Query: 91  KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
            + V  F  E    K  +   +  L+ +      I I  ++  +GS+ D +    GGK+ 
Sbjct: 49  TMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL 108
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
           LP ++ +  Q+A+G++ +                  E     + DFG     L R + D+
Sbjct: 109 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDN 163
Query: 208 DMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           +   R G      P +W  PE    G  + ++D W FG  + E++T G  P+ G++  ++
Sbjct: 164 EYTAREGAK---FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADV 220
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
             ++      P +    P  + +++  C++     RP    +  +L  F ++    Y 
Sbjct: 221 MTALSQGYRMPRV-ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQ 277

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L  R+G G FG+VW+ T + +        ++A+K L P      + F+ +  ++  K
Sbjct: 10  SLQLIKRLGNGQFGEVWMGTWNGNT-------KVAIKTLKP-GTMSPESFLEE-AQIMKK 60
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            +  + V  L+ +        +     +GS+ D +    G  L LP+++    Q+A G++
Sbjct: 61  LKHDKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +                     + DFG     L R + D++   R G      P +
Sbjct: 120 YIERMNYIHRDLRSANILVGNGLICKIADFG-----LARLIEDNEXTARQGAK---FPIK 171
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E++T G  P+ G +  E+   V      PC P  
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC-PQD 230
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++  ++I C++ D   RP    +   L  + ++    Y  GE
Sbjct: 231 CPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGE 275

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 318
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 319 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 378 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGA---KFPIK 429
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE- 488
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            P ++ +++  C+  +   RP   + L AF
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTF-EYLQAF 517

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 235
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 236 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 346
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 405
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  +   RP    +   L  + +S    Y  GE
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 450

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 99  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 158 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 209
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP
Sbjct: 210 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 154 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 205
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 154 DFG-----LMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 205
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 164 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 215
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP
Sbjct: 216 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 164 DFG-----LMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 215
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP
Sbjct: 216 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ DR+ + +G  L L  + RY +Q+A+G+  L S                  D + +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           DFG     L R+L  +D    M      P  + APE  +       S  +DTW FG ++ 
Sbjct: 154 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 205
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EM T G +PW G +  +I H +  + E+   P   P  + NV++ C+ +   +RP
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41  DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
           DP+  +L   +G+G FG V+L    +     D  H  A+K+L             K E  
Sbjct: 26  DPSHFELLKVLGQGSFGKVFLV---RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
                    V  LH      GK+ + + F  G  GD   +  +       D+  Y  +LA
Sbjct: 83  ILADVNHPFVVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
            G+  LHS+G              E   + L DFG+       ++     A    GT  Y
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KEAIDHEKKAYSFCGTVEY 196
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           MAPE      R   S   D W +G  + EMLTG  P+ GK  +E     +I K K  +P 
Sbjct: 197 MAPEVVN---RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETM--TLILKAKLGMPQ 251
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
            L    ++++   F+ +  NR L +    A E  ++  Y+  +W  L  R +
Sbjct: 252 FLSTEAQSLLRALFKRNPANR-LGSGPDGAEEIKRHVFYSTIDWNKLYRREI 302

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 235
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 236 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 346
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 405
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            P ++ +++  C+  +   RP   + L AF
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTF-EYLQAF 434

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 235
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 236 LRHEKLV-QLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 346
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 405
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            P ++ +++  C+  +   RP   + L AF
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTF-EYLQAF 434

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 19  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +G + D +  + G  L LP ++    Q+A G++
Sbjct: 70  LRHEKLV-QLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  D   RP    +   L  + +S    Y  GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 12  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 62
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 63  LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 121
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 122 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 173
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 232
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  +   RP    +   L  + +S    Y  GE
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 277

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 16  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 66
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 67  LRHEKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 177
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 236
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  +   RP    +   L  + +S    Y  GE
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 9   SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 59
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 60  LRHEKLV-QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 118
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 119 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEXTARQGAK---FPIK 170
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 229
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  +   RP    +   L  + +S    Y  GE
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 274

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ +  ++  K
Sbjct: 16  SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 66
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            R  + V  L+ +        +     +GS+ D +  + G  L LP ++    Q+A G++
Sbjct: 67  LRHEKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            +  +               E+    + DFG     L R + D++   R G      P +
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEWTARQGAK---FPIK 177
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           W   E  + G  + ++D W FG  + E+ T G  P+ G    E+   V      PC P  
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 236
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
            P ++ +++  C+  +   RP    +   L  + +S    Y  GE
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41  DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
           DP+  +L   +G+G FG V+L      +D    Y   A+K+L             K E  
Sbjct: 23  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERD 79
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
                    +  LH      GK+ + + F  G  GD   +  +       D+  Y  +LA
Sbjct: 80  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 137
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
             +  LHS+G              E   + L DFG+       S+     A    GT  Y
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEY 193
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           MAPE      RG      D W FG  + EMLTG  P+ GK  +E     +I K K  +P 
Sbjct: 194 MAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQ 248
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
            L P  ++++   F+ +  NR L A      E  +++ ++  +W  L  R +
Sbjct: 249 FLSPEAQSLLRMLFKRNPANR-LGAGPDGVEEIKRHSFFSTIDWNKLYRREI 299

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41  DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
           DP+  +L   +G+G FG V+L      +D    Y   A+K+L             K E  
Sbjct: 22  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERD 78
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
                    +  LH      GK+ + + F  G  GD   +  +       D+  Y  +LA
Sbjct: 79  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
             +  LHS+G              E   + L DFG+       S+     A    GT  Y
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEY 192
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           MAPE      RG      D W FG  + EMLTG  P+ GK  +E     +I K K  +P 
Sbjct: 193 MAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQ 247
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
            L P  ++++   F+ +  NR L A      E  +++ ++  +W  L  R +
Sbjct: 248 FLSPEAQSLLRMLFKRNPANR-LGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41  DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
           DP+  +L   +G+G FG V+L      +D    Y   A+K+L             K E  
Sbjct: 22  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERD 78
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
                    +  LH      GK+ + + F  G  GD   +  +       D+  Y  +LA
Sbjct: 79  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
             +  LHS+G              E   + L DFG    L   S+     A    GT  Y
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG----LSKESIDHEKKAYSFCGTVEY 192
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           MAPE      RG      D W FG  + EMLTG  P+ GK  +E     +I K K  +P 
Sbjct: 193 MAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQ 247
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
            L P  ++++   F+ +  NR L A      E  +++ ++  +W  L  R +
Sbjct: 248 FLSPEAQSLLRMLFKRNPANR-LGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQ 108
           +G G  G VW     ++       H +AVK +     KE+  ++ ++   ++  K  +  
Sbjct: 33  MGSGTCGQVWKMRFRKTG------HVIAVKQMRRSGNKEENKRILMDL--DVVLKSHDCP 84
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
            +    G  + N  + IAM+   G+  +++ ++  G +P   + +  + + K +  L   
Sbjct: 85  YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 169 -GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
            G              E  Q+ L DFGI     GR + D       G   YMAPE+ +P 
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGIS----GRLVDDKAKDRSAGCAAYMAPERIDPP 199
Query: 228 --VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPA 283
              +       D W  G S++E+ TG  P+     +    + V+++E P +P   G    
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAF 309
            ++ +  C   D R RP    +L H+F
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLLEHSF 286

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 31/285 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELF 101
           S+KL  ++G G FG+VW+  ++ S        ++AVK L P       + V  F  E   
Sbjct: 13  SIKLVKKLGAGQFGEVWMGYYNNST-------KVAVKTLKP-----GTMSVQAFLEEANL 60
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
            K  +   +  L+ +      I I  +F  +GS+ D +    GGK+ LP ++ +  Q+A+
Sbjct: 61  MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  E     + DFG     L R + D++   R G      
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDNEYTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + +++ W FG  + E++T G  P+ G++  ++  ++      P +
Sbjct: 173 PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM 232
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
               P  + +++  C++     RP    +  +L  F ++    Y 
Sbjct: 233 -ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQ 276

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 25/282 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL-PLKEDCAKVFVNKFE 98
           ID   L L+  IG G FG V+ A        F    E+AVK       ED ++   N  +
Sbjct: 4   IDFAELTLEEIIGIGGFGKVYRA--------FWIGDEVAVKAARHDPDEDISQTIENVRQ 55
Query: 99  E--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDIL-RYG 155
           E  LF   +    +  L G+ +    +C+ M+F  G   +R+    G ++P PDIL  + 
Sbjct: 56  EAKLFAMLKHPNIIA-LRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIP-PDILVNWA 111
Query: 156 IQLAKGISDLHS------IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM 209
           +Q+A+G++ LH       I               E+  L      I    L R    +  
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
               G   +MAPE     +    S  +D W +G  + E+LTG  P+ G     + + V +
Sbjct: 172 MSAAGAYAWMAPEVIRASM---FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            K    IPS  P     ++  C+  D  +RP   +IL    +
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 109/277 (39%), Gaps = 39/277 (14%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
           L   +G+G FG V+LA   ++   F      A+K    LK+D   V ++   E     + 
Sbjct: 21  LHKMLGKGSFGKVFLAEFKKTNQFF------AIK---ALKKDV--VLMDDDVECTMVEKR 69
Query: 107 SQSVCWLHGISV-------INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQL 158
             S+ W H               +   M++  G  GD +   Q   K  L     Y  ++
Sbjct: 70  VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
             G+  LHS G              +   + + DFG   +     L D+      GTP+Y
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNXFCGTPDY 184
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +APE     +    +   D W FG  + EML G  P+ G+  EE++HS  I+ + P  P 
Sbjct: 185 IAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS--IRMDNPFYPR 239
Query: 279 GLPPAVENVIIGCFEY----------DLRNRPLMADI 305
            L    +++++  F            D+R  PL  +I
Sbjct: 240 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 39/280 (13%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
             +L   +G+G FG V+LA   ++   F      A+K    LK+D   V ++   E    
Sbjct: 19  DFELHKMLGKGSFGKVFLAEFKKTNQFF------AIK---ALKKDV--VLMDDDVECTMV 67
Query: 104 FRESQSVCWLHGISV-------INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYG 155
            +   S+ W H               +   M++  G  GD +   Q   K  L     Y 
Sbjct: 68  EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYA 125
Query: 156 IQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
            ++  G+  LHS G              +   + + DFG   +     L D+      GT
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNEFCGT 182
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
           P+Y+APE     +    +   D W FG  + EML G  P+ G+  EE++HS  I+ + P 
Sbjct: 183 PDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS--IRMDNPF 237
Query: 276 IPSGLPPAVENVIIGCFEY----------DLRNRPLMADI 305
            P  L    +++++  F            D+R  PL  +I
Sbjct: 238 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 99/252 (39%), Gaps = 19/252 (7%)
Query: 36  TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           + P   P+       IG+G FG V LA  H++ + F     L  K +L  KE+  K  ++
Sbjct: 31  SNPHAKPSDFHFLKVIGKGSFGKVLLA-RHKAEEVFYAVKVLQKKAILKKKEE--KHIMS 87
Query: 96  KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRY 154
           +   L    +    +  LH       K+   + +  G  G+     QR      P    Y
Sbjct: 88  ERNVLLKNVKHP-FLVGLHFSFQTADKLYFVLDYING--GELFYHLQRERCFLEPRARFY 144
Query: 155 GIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             ++A  +  LHS+                   +VL DFG   L       +S  +   G
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG---LCKENIEHNSTTSTFCG 201
Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           TP Y+APE      + P     D W  G  + EML G+ P++ ++  E+Y +++ K    
Sbjct: 202 TPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK---- 254
Query: 275 CIPSGLPPAVEN 286
             P  L P + N
Sbjct: 255 --PLQLKPNITN 264

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK L   KED  +
Sbjct: 209 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT------VAVKTL---KEDTME 259
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A  ++        S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 380 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 430
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGL 325
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+  Q +  +D     L
Sbjct: 431 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 490
Query: 326 GSR 328
           G R
Sbjct: 491 GKR 493

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 10/228 (4%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V L  H  S   +    +L  K  +  + D A  +    E     F  S  V
Sbjct: 83  IGRGAFGEVQLVRHKASQKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 137
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
             L      +  + + M++  G  GD +       +P      Y  ++   +  +HS+G 
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPG--GDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
                        +H  L L DFG    +    +   D A+  GTP+Y++PE  + +   
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV--GTPDYISPEVLKSQGGD 253
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           G    E D W  G  + EML G  P++  S+   Y  ++  K   C P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP 301

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 123/285 (43%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK L   KED  +
Sbjct: 248 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT------VAVKTL---KEDTME 298
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 358
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 359 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 418
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A  ++        S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 419 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 469
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 470 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 514

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 131/303 (43%), Gaps = 24/303 (7%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I ++F   G++ D + +    ++    
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A  ++        S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 173 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGL 325
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+  Q +  +D     L
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
Query: 326 GSR 328
           G R
Sbjct: 284 GKR 286

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 131/304 (43%), Gaps = 24/304 (7%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           ++P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I  +F   G++ D + +    ++   
Sbjct: 57  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A  ++        S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 177 AKFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTG 324
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+  Q +  +D     
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 287
Query: 325 LGSR 328
           LG R
Sbjct: 288 LGKR 291

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           Q V   HG    N  + + ++         + ++R   L  P+   Y  Q+  G   LH 
Sbjct: 81  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 139
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
                           E  ++ +GDFG    L  +   D +    L GTPNY+APE    
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTLCGTPNYIAPEVLSK 195
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
           +     SFE D W  GC +  +L G  P+    ++E Y  + IKK +  IP  + P   +
Sbjct: 196 KGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAAS 250
Query: 287 VIIGCFEYDLRNRPLMADILH 307
           +I    + D   RP + ++L+
Sbjct: 251 LIQKMLQTDPTARPTINELLN 271

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           Q V   HG    N  + + ++         + ++R   L  P+   Y  Q+  G   LH 
Sbjct: 77  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 135
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
                           E  ++ +GDFG    L  +   D +    L GTPNY+APE    
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
           +     SFE D W  GC +  +L G  P+    ++E Y  + IKK +  IP  + P   +
Sbjct: 192 KGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAAS 246
Query: 287 VIIGCFEYDLRNRPLMADILH 307
           +I    + D   RP + ++L+
Sbjct: 247 LIQKMLQTDPTARPTINELLN 267

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A  ++        S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 173 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGL 325
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+  Q +  +D     L
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
Query: 326 GSR 328
           G R
Sbjct: 284 GKR 286

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           Q V   HG    N  + + ++         + ++R   L  P+   Y  Q+  G   LH 
Sbjct: 77  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 135
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
                           E  ++ +GDFG    L  +   D +    L GTPNY+APE    
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
           +     SFE D W  GC +  +L G  P+    ++E Y  + IKK +  IP  + P   +
Sbjct: 192 KGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAAS 246
Query: 287 VIIGCFEYDLRNRPLMADILH 307
           +I    + D   RP + ++L+
Sbjct: 247 LIQKMLQTDPTARPTINELLN 267

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 119/277 (42%), Gaps = 23/277 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++ T + +KH++G G +G+V++    + +        +AVK    LKED  +V     E 
Sbjct: 29  MERTDITMKHKLGGGQYGEVYVGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 79
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQL 158
              K  +  ++  L G+  +     I  ++   G++ D + +    ++    +L    Q+
Sbjct: 80  AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
           +  +  L                  E+  + + DFG+  L+ G + +    +   ++   
Sbjct: 140 SSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 199
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
           P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  ++ K  + 
Sbjct: 200 PESLA--------YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-DLLEKGYRM 250
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
             P G PP V  ++  C+++   +RP  A+   AFE+
Sbjct: 251 EQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFET 287

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I    + LK  +G G FG V+LA  H    + D+   +AVK L    E   + F  + E 
Sbjct: 38  IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM-LVAVKALKEASESARQDFQREAEL 96
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GK 145
           L     + Q +    G+      + +  ++      +R  +  G              G 
Sbjct: 97  L--TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
           L L  +L    Q+A G+  L  +               +   + +GDFG     + R + 
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIY 209
Query: 206 DSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
            +D   R+G    M P +W P    +    + E+D W FG  + E+ T G QPW+  S  
Sbjct: 210 STDY-YRVGG-RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA--VYND 319
           E    +   +E    P   PP V  ++ GC++ + + R  + D+    ++   A  VY D
Sbjct: 268 EAIDCITQGRELE-RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLD 326

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 9/200 (4%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           Q V   HG    N  + + ++         + ++R   L  P+   Y  Q+  G   LH 
Sbjct: 99  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 157
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
                           E  ++ +GDFG   L            +  GTPNY+APE    +
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
                SFE D W  GC +  +L G  P+    ++E Y  + IKK +  IP  + P   ++
Sbjct: 215 GH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASL 269
Query: 288 IIGCFEYDLRNRPLMADILH 307
           I    + D   RP + ++L+
Sbjct: 270 IQKMLQTDPTARPTINELLN 289

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 9/200 (4%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           Q V   HG    N  + + ++         + ++R   L  P+   Y  Q+  G   LH 
Sbjct: 75  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 133
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
                           E  ++ +GDFG   L            +  GTPNY+APE    +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
                SFE D W  GC +  +L G  P+    ++E Y  + IKK +  IP  + P   ++
Sbjct: 191 GH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASL 245
Query: 288 IIGCFEYDLRNRPLMADILH 307
           I    + D   RP + ++L+
Sbjct: 246 IQKMLQTDPTARPTINELLN 265

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 122/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I ++F   G++ D + +    ++    
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 173 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 9/200 (4%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
           Q V   HG    N  + + ++         + ++R   L  P+   Y  Q+  G   LH 
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 159
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
                           E  ++ +GDFG   L            +  GTPNY+APE    +
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
                SFE D W  GC +  +L G  P+    ++E Y  + IKK +  IP  + P   ++
Sbjct: 217 GH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASL 271
Query: 288 IIGCFEYDLRNRPLMADILH 307
           I    + D   RP + ++L+
Sbjct: 272 IQKMLQTDPTARPTINELLN 291

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 23/286 (8%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           ++P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I ++F   G++ D + +    ++   
Sbjct: 57  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I    + LK  +G G FG V+LA  H    + D+   +AVK L    E   + F  + E 
Sbjct: 9   IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM-LVAVKALKEASESARQDFQREAEL 67
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GK 145
           L     + Q +    G+      + +  ++      +R  +  G              G 
Sbjct: 68  L--TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
           L L  +L    Q+A G+  L  +               +   + +GDFG     + R + 
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIY 180
Query: 206 DSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
            +D   R+G    M P +W P    +    + E+D W FG  + E+ T G QPW+  S  
Sbjct: 181 STDY-YRVGGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA--VYND 319
           E    +   +E    P   PP V  ++ GC++ + + R  + D+    ++   A  VY D
Sbjct: 239 EAIDCITQGRELE-RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLD 297

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I    + LK  +G G FG V+LA  H    + D+   +AVK L    E   + F  + E 
Sbjct: 15  IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM-LVAVKALKEASESARQDFQREAEL 73
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GK 145
           L     + Q +    G+      + +  ++      +R  +  G              G 
Sbjct: 74  L--TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
           L L  +L    Q+A G+  L  +               +   + +GDFG     + R + 
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIY 186
Query: 206 DSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
            +D   R+G    M P +W P    +    + E+D W FG  + E+ T G QPW+  S  
Sbjct: 187 STDY-YRVGGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA--VYND 319
           E    +   +E    P   PP V  ++ GC++ + + R  + D+    ++   A  VY D
Sbjct: 245 EAIDCITQGRELE-RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLD 303

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           ++P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I  +F   G++ D + +    ++   
Sbjct: 57  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 122/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 3   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 53
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I ++F   G++ D + +    ++    
Sbjct: 54  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 174 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 224
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 225 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 51/305 (16%)
Query: 40  IDPTS-----LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---------L 85
           +DPT      LK    +G G FG V L  +    D+  E  ++AVK L P         L
Sbjct: 1   VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADL 58
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
           K++  ++  N + E   K++    +C   G       I + M+F   GS+ + + + +  
Sbjct: 59  KKE-IEILRNLYHENIVKYK---GICTEDG----GNGIKLIMEFLPSGSLKEYLPKNKN- 109
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           K+ L   L+Y +Q+ KG+  L S                   Q+ +GDFG+   +     
Sbjct: 110 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI----- 164
Query: 205 SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT----------- 250
            ++D        +  +P  W   E  ++      +D W FG ++ E+LT           
Sbjct: 165 -ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 223
Query: 251 ---GIQPWFGK-SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
               I P  G+ +V  + +++   K  PC P   P  V  ++  C+E+   NR    +++
Sbjct: 224 FLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Query: 307 HAFES 311
             FE+
Sbjct: 283 EGFEA 287

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           ++P   +  ++ T + +KH++G G +G+V+     + +        +AVK L   KED  
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTL---KEDTM 56
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I  +F   G++ D + +    ++   
Sbjct: 57  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           ++P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I  +F   G++ D + +    ++   
Sbjct: 57  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 173 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 51/305 (16%)
Query: 40  IDPTS-----LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---------L 85
           +DPT      LK    +G G FG V L  +    D+  E  ++AVK L P         L
Sbjct: 13  VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADL 70
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
           K++  ++  N + E   K++    +C   G    NG I + M+F   GS+ + + + +  
Sbjct: 71  KKE-IEILRNLYHENIVKYK---GICTEDGG---NG-IKLIMEFLPSGSLKEYLPKNKN- 121
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           K+ L   L+Y +Q+ KG+  L S                   Q+ +GDFG+   +     
Sbjct: 122 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI----- 176
Query: 205 SDSDMALRLGTPNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT----------- 250
            ++D        +  +P  W  PE  ++      +D W FG ++ E+LT           
Sbjct: 177 -ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
Query: 251 ---GIQPWFGK-SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
               I P  G+ +V  + +++   K  PC P   P  V  ++  C+E+   NR    +++
Sbjct: 236 FLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
Query: 307 HAFES 311
             FE+
Sbjct: 295 EGFEA 299

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 24/295 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++ T + +KH++G G FG+V+     + +        +AVK    LKED  +V     E 
Sbjct: 8   MERTDITMKHKLGGGQFGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 58
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
              K  +  ++  L G+        I  +F   G++ D + +    ++    +L    Q+
Sbjct: 59  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
           +  +  L                  E+  + + DFG+  L+ G + +    +   ++   
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
           P  +A  ++        S ++D W FG  + E+ T G+ P+ G    ++Y  ++ K  + 
Sbjct: 179 PESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRM 229
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGLGSR 328
             P G P  V  ++  C++++  +RP  A+I  AFE+  Q +  +D     LG R
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 284

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 6   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 56
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 57  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 116
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 117 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 177 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 227
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 228 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 4   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 54
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 55  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 174
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 175 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 225
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 3   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 53
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 54  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 174 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 224
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 225 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
            +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  
Sbjct: 1   VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 51
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I  +F   G++ D + +    ++   
Sbjct: 52  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 172 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY- 222
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 4   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 54
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 55  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 175 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 225
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +
Sbjct: 15  SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 65
Query: 92  VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K  +  ++  L G+        I  +F   G++ D + +    ++    
Sbjct: 66  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 125
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
           +L    Q++  +  L                  E+  + + DFG+  L+ G + +    +
Sbjct: 126 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
              ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  
Sbjct: 186 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 236
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 237 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 281

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 126/295 (42%), Gaps = 24/295 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +V     E 
Sbjct: 8   MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 58
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
              K  +  ++  L G+        I  +F   G++ D + +    ++    +L    Q+
Sbjct: 59  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
           +  +  L                  E+  + + DFG+  L+ G + +    +   ++   
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA 178
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
           P  +A  ++        S ++D W FG  + E+ T G+ P+ G    ++Y  ++ K  + 
Sbjct: 179 PESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRM 229
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGLGSR 328
             P G P  V  ++  C++++  +RP  A+I  AFE+  Q +  +D     LG R
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 284

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
            +P   +  ++ T + +KH++G G +G+V+     + +        +AVK    LKED  
Sbjct: 1   VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 51
Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +V     E    K  +  ++  L G+        I  +F   G++ D + +    ++   
Sbjct: 52  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
            +L    Q++  +  L                  E+  + + DFG+  L+ G + +    
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
           +   ++   P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y 
Sbjct: 172 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY- 222
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            ++ K  +   P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 23/277 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +V     E 
Sbjct: 12  MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 62
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
              K  +  ++  L G+        I  +F   G++ D + +    ++    +L    Q+
Sbjct: 63  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
           +  +  L                  E+  + + DFG+  L+ G + +    +   ++   
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 182
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
           P  +A            S ++D W FG  + E+ T G+ P+ G  + ++Y  ++ K  + 
Sbjct: 183 PESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRM 233
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
             P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 27/284 (9%)
Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELF 101
           P+ L     +G+G FG     TH ++ +       + +K L+   E+  + F+ + + + 
Sbjct: 9   PSDLIHGEVLGKGCFGQAIKVTHRETGE------VMVMKELIRFDEETQRTFLKEVKVM- 61
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
            +  E  +V    G+   + ++    ++ +G     I +    + P    + +   +A G
Sbjct: 62  -RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLG--------RSLSDSDMALR- 212
           ++ LHS+               E+  +V+ DFG+  L++         RSL   D   R 
Sbjct: 121 MAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 213 --LGTPNYMAPEQWEPEVRGPISFE-TDTWGFGCSIMEMLTGIQ--PWFGKSVEEIYHSV 267
             +G P +MAPE     + G    E  D + FG  + E++  +   P +     +   +V
Sbjct: 181 TVVGNPYWMAPEM----INGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV 236
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
               ++ C P   PP+   + + C + D   RP    + H  E+
Sbjct: 237 RGFLDRYC-PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
           +GDFG+   +        D+    GTPNY+APE      +   SFE D W  GC +  +L
Sbjct: 183 IGDFGLATKIEFDGERKKDLC---GTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTLL 236
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            G  P+    ++E Y  + IKK +  +P  + P    +I      D   RP +A++L
Sbjct: 237 VGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/288 (20%), Positives = 127/288 (44%), Gaps = 25/288 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++ T + +KH++G G +G+V+     + +        +AVK    LKED  +V     E 
Sbjct: 8   MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 58
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
              K  +  ++  L G+        I ++F   G++ D + +    ++    +L    Q+
Sbjct: 59  AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
           +  +  L                  E+  + + DFG+  L+ G + +    +   ++   
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
           P  +A  ++        S ++D W FG  + E+ T G+ P+ G    ++Y  ++ K  + 
Sbjct: 179 PESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRM 229
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES--SQNAVYNDG 320
             P G P  V  ++  C++++  +RP  A+I  AFE+   ++++ ++G
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 47/275 (17%)
Query: 39  WIDPTSLKLK----HR--------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK 86
           W  P + K+K    HR        IGRG FG+V +     +   F      A+K+L    
Sbjct: 58  WAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVF------AMKIL---- 107
Query: 87  EDCAKVFVNKFEEL----FPKFRESQSVC------W---LHGISVINGKICIAMKFYEGS 133
                   NK+E L       FRE + V       W   LH     +  + + M +Y G 
Sbjct: 108 --------NKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGG 159
Query: 134 VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDF 193
               +  +   +LP      Y  ++   I  +H +                +  + L DF
Sbjct: 160 DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADF 219
Query: 194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLTG 251
           G    L+      S +A+  GTP+Y++PE  +    G   +  E D W  G  + EML G
Sbjct: 220 GSCLKLMEDGTVQSSVAV--GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
             P++ +S+ E Y  ++  KE+   P+ +    EN
Sbjct: 278 ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 42  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 93  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 148
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 207
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 268 KAMKRLMAECLKKKRDERPLFPQILASIE 296

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
           +GDFG+   +        D+    GTPNY+APE      +   SFE D W  GC +  +L
Sbjct: 167 IGDFGLATKIEFDGERKKDLC---GTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTLL 220
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            G  P+    ++E Y  + IKK +  +P  + P    +I      D   RP +A++L
Sbjct: 221 VGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 17/282 (6%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I+ + + L  RIG G FG V+    H          ++AVK+L  +  D        F  
Sbjct: 33  IEASEVMLSTRIGSGSFGTVYKGKWHG---------DVAVKILKVV--DPTPEQFQAFRN 81
Query: 100 LFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
                R+++ V  L  +  +    + I  ++ EGS   +    +  K  +  ++    Q 
Sbjct: 82  EVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           A+G+  LH+                E   + +GDFG+   +  R      +    G+  +
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLW 200
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIP 277
           MAPE    +   P SF++D + +G  + E++TG  P+    + ++I   V      P + 
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 278 ---SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV 316
                 P A++ ++  C +     RPL   IL + E  Q+++
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 41  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 91
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 92  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 147
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 206
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 266
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 267 KAMKRLMAECLKKKRDERPLFPQILASIE 295

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 19  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 70  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 125
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 184
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 244
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 245 KAMKRLMAECLKKKRDERPLFPQILASIE 273

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 19  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 70  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 125
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 184
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 244
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 245 KAMKRLMAECLKKKRDERPLFPQILASIE 273

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
            K ++G G FGDV L     S  +         +++  + +D ++V + + E      + 
Sbjct: 26  FKRKLGSGAFGDVHLVEERSSGLE---------RVIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 107 SQSVCWLHGISVING--KICIAMKFYEG-SVGDRI--AQQRGGKLPLPDILRYGIQLAKG 161
                 +    V      + I M+  EG  + +RI  AQ RG  L    +     Q+   
Sbjct: 77  LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 162 ISDLHS---IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           ++  HS   +                H  + + DFG+  L      SD       GT  Y
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK----SDEHSTNAAGTALY 192
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK---PC 275
           MAPE ++ +V    +F+ D W  G  +  +LTG  P+ G S+EE+      K+      C
Sbjct: 193 MAPEVFKRDV----TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
            P  L P   +++      D   RP  A +LH
Sbjct: 249 RP--LTPQAVDLLKQMLTKDPERRPSAAQVLH 278

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 16  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 66
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 67  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 122
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 181
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 241
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 242 KAMKRLMAECLKKKRDERPLFPQILASIE 270

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 14  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 65  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 120
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 179
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIE 268

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 19  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 65
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 66  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 123
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               E   + + DFG    + GR+ 
Sbjct: 124 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW 183
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 184 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 235 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 267

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---ISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
             +      GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 XLA------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 14  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 65  NILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 120
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+  +    S S     L  G+  +MAPE   
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 179
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIE 268

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           IG G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  IGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  GD  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LXGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           IG G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  IGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  GD  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 33  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 79
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 80  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 137
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 198 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 249 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 42  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 93  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 148
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+       S S     L  G+  +MAPE   
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIR 207
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 268 KAMKRLMAECLKKKRDERPLFPQILASIE 296

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 53  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 99
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 157
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 158 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 218 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 269 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 34  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 85  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 140
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+       S S     L  G+  +MAPE   
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIR 199
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 259
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 260 KAMKRLMAECLKKKRDERPLFPQILASIE 288

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
           +GDFG    L  +   D +    L GTPNY+APE      +   SFE D W  GC +  +
Sbjct: 183 IGDFG----LATKIEFDGERKKXLCGTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTL 235
Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           L G  P+    ++E Y  + IKK +  +P  + P    +I      D   RP +A++L
Sbjct: 236 LVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
           +GDFG    L  +   D +    L GTPNY+APE      +   SFE D W  GC +  +
Sbjct: 183 IGDFG----LATKIEFDGERKKTLCGTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTL 235
Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           L G  P+    ++E Y  + IKK +  +P  + P    +I      D   RP +A++L
Sbjct: 236 LVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 14  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           ++    G S    ++ I  ++ EGS       I + +   + L DI R   Q A+G+  L
Sbjct: 65  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 120
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H+                E   + +GDFG+       S S     L  G+  +MAPE   
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIR 179
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
            + + P SF++D + FG  + E++TG  P+    + ++I   V    +  +   + S  P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
            A++ ++  C +     RPL   IL + E
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIE 268

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 27  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 73
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 74  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 131
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 132 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 191
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 192 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 243 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 275

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 44/275 (16%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEY--HELAV-KMLLPLKEDCAK---VFVNKFEELFP 102
            +IG G FG   L    +S +D  +Y   E+ + +M    +E+  +   V  N       
Sbjct: 30  QKIGEGSFGKAILV---KSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           ++RES            NG + I M + EG  +  RI  Q+G       IL + +Q+   
Sbjct: 87  QYRESFEE---------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTPNYM 219
           +  +H                 +   + LGDFGI      R L+ +    R  +GTP Y+
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI-----ARVLNSTVELARACIGTPYYL 192
Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           +PE  E +   P + ++D W  GC + E+ T    +   S++ +   +        I   
Sbjct: 193 SPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI--------ISGS 241
Query: 280 LPPA-------VENVIIGCFEYDLRNRPLMADILH 307
            PP        + +++   F+ + R+RP +  IL 
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I +M  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 30  VATPTQTRPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
           + T    +PW      +   +LKL  R+G G FG+VW+         ++ + ++AVK L 
Sbjct: 4   MQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLK 56
Query: 84  --PLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQ 140
              +  D      N  ++L     + Q +  L+ + V    I I  ++ E GS+ D +  
Sbjct: 57  QGSMSPDAFLAEANLMKQL-----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKT 110
Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLL 200
             G KL +  +L    Q+A+G++ +                  +     + DFG     L
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----L 165
Query: 201 GRSLSDSDMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWF 256
            R + D++   R G      P +W  PE    G  + ++D W FG  + E++T G  P+ 
Sbjct: 166 ARLIEDNEYTAREGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 222
Query: 257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQ 313
           G +  E+  ++  +  +   P   P  +  ++  C++    +RP    +  +L  F ++ 
Sbjct: 223 GMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
Query: 314 NAVYN 318
              Y 
Sbjct: 282 EGQYQ 286

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 28/272 (10%)
Query: 47  LKHRIGRGPFGDVW--LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFP 102
           L   +G G FG+V+  + T+H+      E   +AVK     K+DC      KF  E +  
Sbjct: 28  LNRILGEGFFGEVYEGVYTNHKG-----EKINVAVKTC---KKDCTLDNKEKFMSEAVIM 79
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           K  +   +  L GI +      I M+ Y  G +G  + + +   L +  ++ Y +Q+ K 
Sbjct: 80  KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKA 137
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           ++ L SI                 + + LGDFG     L R + D D      T     P
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT---RLP 189
Query: 222 EQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
            +W  PE      F T  D W F   + E+L+ G QP+F    +++   V+ K ++   P
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKP 248
Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
              PP +  ++  C++YD  +RP   +++ + 
Sbjct: 249 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 22  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 73
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 74  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAKFPIK 183
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE       G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 184 WTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 239
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
           P   P  +  ++  C++    +RP    +  +L  F ++    Y 
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 284

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 20  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 71
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 72  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAKFPIK 181
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE       G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 182 WTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 237
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
           P   P  +  ++  C++    +RP    +  +L  F ++    Y 
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 282

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 43/295 (14%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND 319
             +V  K +   PS     ++++        LRN  L  D+  AF + +N V ND
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDL--------LRNL-LQVDLTKAFGNLKNGV-ND 290

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 10  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 61
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 62  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 168
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 227
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRP 251

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 32/285 (11%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 14  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 66  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
           P   P  +  ++  C++    +RP    +  +L  F ++    Y 
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 276

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 28/272 (10%)
Query: 47  LKHRIGRGPFGDVW--LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFP 102
           L   +G G FG+V+  + T+H+      E   +AVK     K+DC      KF  E +  
Sbjct: 12  LNRILGEGFFGEVYEGVYTNHKG-----EKINVAVKTC---KKDCTLDNKEKFMSEAVIM 63
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           K  +   +  L GI +      I M+ Y  G +G  + + +   L +  ++ Y +Q+ K 
Sbjct: 64  KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKA 121
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           ++ L SI                 + + LGDFG     L R + D D      T     P
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT---RLP 173
Query: 222 EQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
            +W  PE      F T  D W F   + E+L+ G QP+F    +++   V+ K ++   P
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKP 232
Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
              PP +  ++  C++YD  +RP   +++ + 
Sbjct: 233 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 28/272 (10%)
Query: 47  LKHRIGRGPFGDVW--LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFP 102
           L   +G G FG+V+  + T+H+      E   +AVK     K+DC      KF  E +  
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKG-----EKINVAVK---TCKKDCTLDNKEKFMSEAVIM 67
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           K  +   +  L GI +      I M+ Y  G +G  + + +   L +  ++ Y +Q+ K 
Sbjct: 68  KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKA 125
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           ++ L SI                 + + LGDFG     L R + D D      T     P
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT---RLP 177
Query: 222 EQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
            +W  PE      F T  D W F   + E+L+ G QP+F    +++   V+ K ++   P
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKP 236
Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
              PP +  ++  C++YD  +RP   +++ + 
Sbjct: 237 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + F      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHKETGNHF------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           IG G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  IGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + F      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHKETGNHF------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + F      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHKETGNHF------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 15/266 (5%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 18  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 68
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           ++    G S    ++ I  ++ EGS           K  +  ++    Q A+G+  LH+ 
Sbjct: 69  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
                          E + + +GDFG+  +    S S     L  G+  +MAPE    + 
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQD 186
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAV 284
             P SF++D + FG  + E++TG  P+        + E+     +  +   + S  P  +
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
           + ++  C +     RP    IL   E
Sbjct: 247 KRLMAECLKKKRDERPSFPRILAEIE 272

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 168
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 169 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 223
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 224 EIRFPRTLSPEAKSLLAGLLKKDPKQR 250

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 14  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 66  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRP 255

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 15  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 66
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 67  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 173
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 232
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRP 256

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 14  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 66  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRP 255

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 53  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 99
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 157
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + G + 
Sbjct: 158 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW 217
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
           +        GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 218 T------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 269 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 16  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 67
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 68  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 174
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 233
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRP 257

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 9   TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 60
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 61  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 167
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 226
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRP 250

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 20  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 71
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 72  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 178
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 237
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRP 261

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 19  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 70
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 71  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 177
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 236
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRP 260

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 118 VINGKICIAMKFYEG-SVGDRI------AQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
           V+  ++ + MK   G SV D I       + + G L    I     ++ +G+  LH  G 
Sbjct: 83  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGI-PYLLLGRSLSDSDM-ALRLGTPNYMAPEQWEPEV 228
                        E   + + DFG+  +L  G  ++ + +    +GTP +MAPE  E +V
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 201
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP------- 281
           RG   F+ D W FG + +E+ TG  P+      ++   + ++ + P + +G+        
Sbjct: 202 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 259
Query: 282 --PAVENVIIGCFEYDLRNRPLMADILHA--FESSQNAVY 317
              +   +I  C + D   RP  A++L    F+ ++N  +
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 118 VINGKICIAMKFYEG-SVGDRI------AQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
           V+  ++ + MK   G SV D I       + + G L    I     ++ +G+  LH  G 
Sbjct: 78  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGI-PYLLLGRSLSDSDM-ALRLGTPNYMAPEQWEPEV 228
                        E   + + DFG+  +L  G  ++ + +    +GTP +MAPE  E +V
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 196
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP------- 281
           RG   F+ D W FG + +E+ TG  P+      ++   + ++ + P + +G+        
Sbjct: 197 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 254
Query: 282 --PAVENVIIGCFEYDLRNRPLMADIL-HAF 309
              +   +I  C + D   RP  A++L H F
Sbjct: 255 YGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
           YG ++   +  LHS                +   + + DFG    L    +SD + M   
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 170
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP Y+APE  E    G      D WG G  + EM+ G  P++ +  E ++  +++  E
Sbjct: 171 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 225
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   P  L P  ++++ G  + D + R
Sbjct: 226 EIRFPRTLSPEAKSLLAGLLKKDPKQR 252

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G FG+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 23  TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 74
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 75  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAKFPIK 184
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE       G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 185 WTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 240
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
           P   P  +  ++  C++    +RP
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRP 264

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+AP      +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEYLAPAII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+ +        GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
           L + DFG    L G +          GT  YMAPE  +   RG      D W  GC+I+E
Sbjct: 162 LKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIE 217
Query: 248 MLTGIQPWF--GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           M TG  P++  G+    ++  V + K  P IP  +    +  I+ CFE D   R    D+
Sbjct: 218 MATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 276
Query: 306 L 306
           L
Sbjct: 277 L 277

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 21/241 (8%)
Query: 33  PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKED 88
           P+     +  T       +G+G FG V LA    + + +      A+K+L    +   +D
Sbjct: 9   PSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELY------AIKILKKDVVIQDDD 62
Query: 89  CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLP 147
                V K   +     +   +  LH       ++   M++  G  GD +   Q+ GK  
Sbjct: 63  VECTMVEK--RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNG--GDLMYHIQQVGKFK 118
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
            P  + Y  +++ G+  LH  G                  + + DFG+    +   ++  
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR 178
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
           +     GTP+Y+APE    +   P     D W +G  + EML G  P+ G+  +E++ S+
Sbjct: 179 EFC---GTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
Query: 268 V 268
           +
Sbjct: 233 M 233

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 70  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 118
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 176
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 230
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 231 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 285
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 286 LKDLLRNLLQVDLTKR 301

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 35  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 83
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 84  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 141
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+ +        GTP Y+APE 
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEI 195
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 196 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 250
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 251 LKDLLRNLLQVDLTKR 266

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
           L + DFG    L G +          GT  YMAPE  +   RG      D W  GC+I+E
Sbjct: 148 LKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIE 203
Query: 248 MLTGIQPWF--GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           M TG  P++  G+    ++  V + K  P IP  +    +  I+ CFE D   R    D+
Sbjct: 204 MATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 262
Query: 306 L 306
           L
Sbjct: 263 L 263

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           +P Q    +D    +    +G G FG V L  H ++ + +      A+K+L     D  K
Sbjct: 33  SPAQNTAHLD--QFERIRTLGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQK 79
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + +++  G  G+  +  +R G
Sbjct: 80  VVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPG--GEMFSHLRRIG 137
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 197
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP Y+APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 198 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 249 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           DFGI   +     S +  A  +GT  Y++PEQ     RG  +   +D +  GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
           G  P+ G S + + +  V  +E P  PS    GL   ++ V++     +  NR      +
Sbjct: 215 GEPPFTGDSPDSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRA 329
            AD+  +H  E  +   V  D E T L S A
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSA 303

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKEIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG+   + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKEIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG+   + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 42  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 90
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 91  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 148
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 202
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 203 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 257
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 258 LKDLLRNLLQVDLTKR 273

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 37/251 (14%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL----FPKFRE 106
           IGRG FG+V +     +   +      A+K+L            NK+E L       FRE
Sbjct: 98  IGRGAFGEVAVVKMKNTERIY------AMKIL------------NKWEMLKRAETACFRE 139
Query: 107 SQSVC------W---LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI- 156
            + V       W   LH        + + M +Y G     +  +   KLP  D+ R+ I 
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIG 198
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           ++   I  +H +                +  + L DFG    +       S +A+  GTP
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV--GTP 256
Query: 217 NYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           +Y++PE  Q   +  G    E D W  G  + EML G  P++ +S+ E Y  ++  +E+ 
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
Query: 275 CIPSGLPPAVE 285
             PS +    E
Sbjct: 317 QFPSHVTDVSE 327

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I   ++ LK  +G G FG V+LA  +    + D+   +AVK L    ++  K F ++  E
Sbjct: 10  IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKI-LVAVKTLKDASDNARKDF-HREAE 67
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAM---------KFYEGSVGDRIAQQRGG---KLP 147
           L     + + +   +G+ V    + +           KF      D +    G    +L 
Sbjct: 68  LLTNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
              +L    Q+A G+  L S                E+  + +GDFG     + R +  +
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG-----MSRDVYST 181
Query: 208 DMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           D   R+G  + M P +W P    +    + E+D W  G  + E+ T G QPW+  S  E+
Sbjct: 182 DY-YRVGG-HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 264 YHSV----VIKKEKPCIPSGLPPAVENVIIGCFE 293
              +    V+++ + C     P  V  +++GC++
Sbjct: 240 IECITQGRVLQRPRTC-----PQEVYELMLGCWQ 268

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 37/251 (14%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL----FPKFRE 106
           IGRG FG+V +     +   +      A+K+L            NK+E L       FRE
Sbjct: 82  IGRGAFGEVAVVKMKNTERIY------AMKIL------------NKWEMLKRAETACFRE 123
Query: 107 SQSVC------W---LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI- 156
            + V       W   LH        + + M +Y G     +  +   KLP  D+ R+ I 
Sbjct: 124 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIG 182
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           ++   I  +H +                +  + L DFG    +       S +A+  GTP
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV--GTP 240
Query: 217 NYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           +Y++PE  Q   +  G    E D W  G  + EML G  P++ +S+ E Y  ++  +E+ 
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 275 CIPSGLPPAVE 285
             PS +    E
Sbjct: 301 QFPSHVTDVSE 311

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 15/266 (5%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 30  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           ++    G S    ++ I  ++ EGS           K  +  ++    Q A+G+  LH+ 
Sbjct: 81  NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
                          E + + +GDFG+       S S     L  G+  +MAPE    + 
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIRMQD 198
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAV 284
             P SF++D + FG  + E++TG  P+        + E+     +  +   + S  P  +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
           + ++  C +     RP    IL   E
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIE 284

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I    + LK  +G G FG V+LA  +  +   D+   +AVK L        K F  +  E
Sbjct: 12  IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKM-LVAVKALKDPTLAARKDF-QREAE 69
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG---------------G 144
           L     + + +   +G+      + +  ++ +    ++  +  G               G
Sbjct: 70  LLTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +L L  +L    Q+A G+  L S                 +  + +GDFG     + R +
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG-----MSRDV 183
Query: 205 SDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
             +D   R+G  + M P +W P    +    + E+D W FG  + E+ T G QPWF  S 
Sbjct: 184 YSTDY-YRVGG-HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
Query: 261 EEIYHSV----VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD---ILHAF 309
            E+   +    V+++ + C     P  V +V++GC++ + + R  + +   ILHA 
Sbjct: 242 TEVIECITQGRVLERPRVC-----PKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 31  ATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
           A  + TR + I    ++L   IG G FGDV     HQ      E   LAV   +   ++C
Sbjct: 2   AMGSSTRDYEIQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNC 54
Query: 90  AKVFV-NKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKL 146
               V  KF  E L  +  +   +  L G+ +    + I M+           Q R   L
Sbjct: 55  TSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSL 113
Query: 147 PLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD 206
            L  ++ Y  QL+  ++ L S                 +D + LGDFG     L R + D
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMED 168
Query: 207 SDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFG 257
           S    A +   P  +MAPE         I+F      +D W FG  + E+L  G++P+ G
Sbjct: 169 STYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
Query: 258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
               ++   +   +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 221 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 42  LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 90
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 91  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 148
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 202
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 203 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 257
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 258 LKDLLRNLLQVDLTKR 273

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D    ++K  +G G FG V L  H +S + +      A+K+L     D  K
Sbjct: 32  TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92  VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
           V  + + E    + R  Q+V +   + +      N  + + M++  G  G+  +  +R G
Sbjct: 79  VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
           +   P    Y  Q+      LHS+               +   + + DFG    + GR+ 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
                    GTP  +APE     +    +   D W  G  I EM  G  P+F     +IY
Sbjct: 197 X------LCGTPEALAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +V  K +   PS     +++++    + DL  R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 15/266 (5%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
            RIG G FG V+    H          ++AVKML        ++   K E    +     
Sbjct: 30  QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           ++    G S    ++ I  ++ EGS           K  +  ++    Q A+G+  LH+ 
Sbjct: 81  NILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
                          E + + +GDFG+       S S     L  G+  +MAPE    + 
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIRMQD 198
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAV 284
             P SF++D + FG  + E++TG  P+        + E+     +  +   + S  P  +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
           + ++  C +     RP    IL   E
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIE 284

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 31  ATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
           A  + TR + I    ++L   IG G FGDV     HQ      E   LAV   +   ++C
Sbjct: 25  AMGSSTRDYEIQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNC 77
Query: 90  AKVFV-NKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKL 146
               V  KF  E L  +  +   +  L G+ +    + I M+           Q R   L
Sbjct: 78  TSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSL 136
Query: 147 PLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD 206
            L  ++ Y  QL+  ++ L S                 +D + LGDFG     L R + D
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMED 191
Query: 207 SDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFG 257
           S    A +   P  +MAPE         I+F      +D W FG  + E+L  G++P+ G
Sbjct: 192 STYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
               ++   +   +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 244 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 49  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +   + +      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 265 LKDLLRNLLQVDLTKR 280

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   LAV   +   ++C    V  KF 
Sbjct: 10  IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 62
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 63  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                 +D + LGDFG     L R + DS    A +  
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 176
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 177 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 229 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 32/302 (10%)
Query: 9   KPAASFEYELFEGDP------DHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLA 62
           K  A+ E +   G P      + +   +A P       +   LKL   +G+G FG V L 
Sbjct: 111 KKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKL---LGKGTFGKVILV 167
Query: 63  THHQSADDFDEYHELAV--KMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
               +      Y+ + +  K ++  K++ A         +    R        +     +
Sbjct: 168 KEKATG----RYYAMKILKKEVIVAKDEVAHTLTEN--RVLQNSRHPFLTALKYSFQT-H 220
Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXXX 179
            ++C  M++  G  G+        ++   D  R YG ++   +  LHS            
Sbjct: 221 DRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 180 XXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETD 237
               + D  + + DFG    L    + D + M    GTP Y+APE  E    G      D
Sbjct: 279 NLMLDKDGHIKITDFG----LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA---VD 331
Query: 238 TWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLR 297
            WG G  + EM+ G  P++ +  E+++  +++  E+   P  L P  ++++ G  + D +
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDPK 389
Query: 298 NR 299
            R
Sbjct: 390 QR 391

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   LAV   +   ++C    V  KF 
Sbjct: 9   IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 61
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 62  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                 +D + LGDFG     L R + DS    A +  
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 175
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 176 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 228 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
           + ++C  M++  G  G+        ++   D  R YG ++   +  LHS           
Sbjct: 223 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 280
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
                + D  + + DFG    L    + D + M    GTP Y+APE  E    G      
Sbjct: 281 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA---V 333
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
           D WG G  + EM+ G  P++ +  E+++  +++  E+   P  L P  ++++ G  + D 
Sbjct: 334 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 391
Query: 297 RNR 299
           + R
Sbjct: 392 KQR 394

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCW-----LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +     L      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCW-----LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +     L      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 10/229 (4%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V L  H  +   +    +L  K  +  + D A  +    E     F  S  V
Sbjct: 77  IGRGAFGEVQLVRHKSTRKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 131
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
             L      +  + + M++  G  GD +       +P      Y  ++   +  +HS+G 
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 189
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
                        +   L L DFG    +    +   D A+  GTP+Y++PE  + +   
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKSQGGD 247
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           G    E D W  G  + EML G  P++  S+   Y  ++  K     P 
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   LAV   +   ++C    V  KF 
Sbjct: 7   IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 59
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 60  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                 +D + LGDFG     L R + DS    A +  
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
           +G G FG V L  H ++ + +      A+K+L     D  KV  + + E    + R  Q+
Sbjct: 50  LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCW-----LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
           V +     L      N  + + M++  G  G+  +  +R G+   P    Y  Q+     
Sbjct: 99  VNFPFLTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS+               +   + + DFG    + GR+          GTP Y+APE 
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
               +    +   D W  G  I EM  G  P+F     +IY  +V  K +   PS     
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
           +++++    + DL  R
Sbjct: 266 LKDLLRNLLQVDLTKR 281

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ D + Q RG   P   +L +G+Q+AKG+  L   G                 Q+ + 
Sbjct: 99  GSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA 157
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEM 248
           DFG+  L     L   D  L         P +W   E    G  + ++D W +G ++ E+
Sbjct: 158 DFGVADL-----LPPDDKQLLYSEAK--TPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 210
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
           +T G +P+ G  + E+   ++ K E+   P      V  V++ C+  D   RP   ++ +
Sbjct: 211 MTFGAEPYAGLRLAEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 269
Query: 308 AF 309
            F
Sbjct: 270 EF 271

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 10/229 (4%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V L  H  +   +    +L  K  +  + D A  +    E     F  S  V
Sbjct: 82  IGRGAFGEVQLVRHKSTRKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 136
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
             L      +  + + M++  G  GD +       +P      Y  ++   +  +HS+G 
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
                        +   L L DFG    +    +   D A+  GTP+Y++PE  + +   
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKSQGGD 252
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           G    E D W  G  + EML G  P++  S+   Y  ++  K     P 
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 301

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   LAV   +   ++C    V  KF 
Sbjct: 4   IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 56
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 57  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                 +D + LGDFG     L R + DS    A +  
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 170
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 171 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 223 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
           + ++C  M++  G  G+        ++   D  R YG ++   +  LHS           
Sbjct: 80  HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 137
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
                + D  + + DFG    L    + D + M    GTP Y+APE  E    G      
Sbjct: 138 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA---V 190
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
           D WG G  + EM+ G  P++ +  E+++  +++  E+   P  L P  ++++ G  + D 
Sbjct: 191 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 248
Query: 297 RNR 299
           + R
Sbjct: 249 KQR 251

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 12/243 (4%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V L  H  +   +    +L  K  +  + D A  +    E     F  S  V
Sbjct: 82  IGRGAFGEVQLVRHKSTRKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 136
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
             L      +  + + M++  G  GD +       +P      Y  ++   +  +HS+G 
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
                        +   L L DFG    +    +   D A+  GTP+Y++PE  + +   
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKSQGGD 252
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENV 287
           G    E D W  G  + EML G  P++  S+   Y  ++  K     P  + +    +N+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 288 IIG 290
           I  
Sbjct: 313 ICA 315

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
           + ++C  M++  G  G+        ++   D  R YG ++   +  LHS           
Sbjct: 81  HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 138
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
                + D  + + DFG    L    + D + M    GTP Y+APE  E    G      
Sbjct: 139 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA---V 191
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
           D WG G  + EM+ G  P++ +  E+++  +++  E+   P  L P  ++++ G  + D 
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 249
Query: 297 RNR 299
           + R
Sbjct: 250 KQR 252

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
           + ++C  M++  G  G+        ++   D  R YG ++   +  LHS           
Sbjct: 82  HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 139
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
                + D  + + DFG    L    + D + M    GTP Y+APE  E    G      
Sbjct: 140 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA---V 192
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
           D WG G  + EM+ G  P++ +  E+++  +++  E+   P  L P  ++++ G  + D 
Sbjct: 193 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 250
Query: 297 RNR 299
           + R
Sbjct: 251 KQR 253

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 26/253 (10%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAV--KMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
           +G+G FG V L+    +    DE + + +  K ++   +D     V K     P   +  
Sbjct: 349 LGKGSFGKVMLSERKGT----DELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPP 402
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHS 167
            +  LH       ++   M++  G  GD +   Q+ G+   P  + Y  ++A G+  L S
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
            G                  + + DFG+    +   ++        GTP+Y+APE    +
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---GTPDYIAPEIIAYQ 517
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV---------IKKEKPCIPS 278
              P     D W FG  + EML G  P+ G+  +E++ S++         + KE   I  
Sbjct: 518 ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 574
Query: 279 GLPPAVENVIIGC 291
           GL        +GC
Sbjct: 575 GLMTKHPGKRLGC 587

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 26/268 (9%)
Query: 36  TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV--KMLLPLKEDCAKVF 93
            R  +  T       +G+G FG V L+    +    DE + + +  K ++   +D     
Sbjct: 13  NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT----DELYAVKILKKDVVIQDDDVECTM 68
Query: 94  VNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDIL 152
           V K     P   +   +  LH       ++   M++  G  GD +   Q+ G+   P  +
Sbjct: 69  VEKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAV 124
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
            Y  ++A G+  L S G                  + + DFG+    +   ++       
Sbjct: 125 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-- 182
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV---- 268
            GTP+Y+APE    +   P     D W FG  + EML G  P+ G+  +E++ S++    
Sbjct: 183 -GTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238
Query: 269 -----IKKEKPCIPSGLPPAVENVIIGC 291
                + KE   I  GL        +GC
Sbjct: 239 AYPKSMSKEAVAICKGLMTKHPGKRLGC 266

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
           +LKL  R+G G  G+VW+         ++ + ++AVK L    +  D      N  ++L 
Sbjct: 14  TLKLVERLGAGQAGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               + Q +  L+ + V    I I  ++ E GS+ D +    G KL +  +L    Q+A+
Sbjct: 66  ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G++ +                  +     + DFG     L R + D++   R G      
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDAEXTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E+  ++  +  +   
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
           P   P  +  ++  C++    +RP    +  +L  F ++    Y 
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 276

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           GS+ D + Q RG   P   +L +G+Q+AKG+  L   G                 Q+ + 
Sbjct: 117 GSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA 175
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEM 248
           DFG+  L     L   D  L         P +W   E    G  + ++D W +G ++ E+
Sbjct: 176 DFGVADL-----LPPDDKQLLYSEAK--TPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
           +T G +P+ G  + E+   ++ K E+   P      V  V++ C+  D   RP   ++ +
Sbjct: 229 MTFGAEPYAGLRLAEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 287
Query: 308 AF 309
            F
Sbjct: 288 EF 289

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           DFGI   +     S +  A  +GT  Y++PEQ     RG  +   +D +  GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
           G  P+ G S   + +  V  +E P  PS    GL   ++ V++     +  NR      +
Sbjct: 215 GEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
            AD+  +H  E  +   V  D E T L S A  + S
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           DFGI   +     S +  A  +GT  Y++PEQ     RG  +   +D +  GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKS-VEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----P 300
           G  P+ G S V   Y  V   +E P  PS    GL   ++ V++     +  NR      
Sbjct: 215 GEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Query: 301 LMADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
           + AD+  +H  E  +   V  D E T L S A  + S
Sbjct: 272 MRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           DFGI   +     S +  A  +GT  Y++PEQ     RG  +   +D +  GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
           G  P+ G S   + +  V  +E P  PS    GL   ++ V++     +  NR      +
Sbjct: 215 GEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
            AD+  +H  E  +   V  D E T L S A  + S
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 104/282 (36%), Gaps = 52/282 (18%)
Query: 39  WIDPTSLKLKHR------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK 86
           W +P  ++LK              IGRG F +V +    Q+   +      A+K++    
Sbjct: 45  WAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVY------AMKIM---- 94
Query: 87  EDCAKVFVNKFEEL----FPKFRESQSVC------W---LHGISVINGKICIAMKFYEGS 133
                   NK++ L       FRE + V       W   LH        + + M++Y G 
Sbjct: 95  --------NKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG 146
Query: 134 VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDF 193
               +  + G ++P      Y  ++   I  +H +G                  + L DF
Sbjct: 147 DLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADF 206
Query: 194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF----ETDTWGFGCSIMEML 249
           G    L       S +A+  GTP+Y++PE  +    GP +     E D W  G    EM 
Sbjct: 207 GSCLKLRADGTVRSLVAV--GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF 264
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEK---PCIPSGLPPAVENVI 288
            G  P++  S  E Y  +V  KE    P +  G+P    + I
Sbjct: 265 YGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   +AV   +   ++C    V  KF 
Sbjct: 7   IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPAMAVA--IKTCKNCTSDSVREKFL 59
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 60  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                 +D + LGDFG     L R + DS    A +  
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   +AV   +   ++C    V  KF 
Sbjct: 7   IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPAMAVA--IKTCKNCTSDSVREKFL 59
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 60  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                 +D + LGDFG     L R + DS    A +  
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTXXKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 122/312 (39%), Gaps = 20/312 (6%)
Query: 8   HKPAASFEYELFEGDPDHLRTVVATPTQ---TRPWIDP-TSLKLKHRIGRGPFGDVWLAT 63
            KP     +++ E    +  T +  PTQ      W  P  +L+    +G G FG V  AT
Sbjct: 8   QKPKYQVRWKIIESYEGNSYTFI-DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 64  HHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG-------I 116
                 + D   ++AVKML        K  +    ++     + +++  L G       +
Sbjct: 67  AFGLGKE-DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125
Query: 117 SVINGKICIA--MKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXX 174
            VI    C    + F        + ++ G  L L D+L +  Q+A+G++ L S       
Sbjct: 126 LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRD 185
Query: 175 XXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF 234
                          +GDFG+   ++  S        RL    +MAPE     V    + 
Sbjct: 186 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDCV---YTV 241
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
           ++D W +G  + E+ + G+ P+ G  V   ++ +V    +   P+  P  + +++  C+ 
Sbjct: 242 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 301
Query: 294 YDLRNRPLMADI 305
            +  +RP    I
Sbjct: 302 LEPTHRPTFQQI 313

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 20/311 (6%)
Query: 9   KPAASFEYELFEGDPDHLRTVVATPTQ---TRPWIDP-TSLKLKHRIGRGPFGDVWLATH 64
           KP     +++ E    +  T +  PTQ      W  P  +L+    +G G FG V  AT 
Sbjct: 1   KPKYQVRWKIIESYEGNSYTFI-DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 59
Query: 65  HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG-------IS 117
                + D   ++AVKML        K  +    ++     + +++  L G       + 
Sbjct: 60  FGLGKE-DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 118
Query: 118 VINGKICIA--MKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXX 175
           VI    C    + F        + ++ G  L L D+L +  Q+A+G++ L S        
Sbjct: 119 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 178
Query: 176 XXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFE 235
                         +GDFG+   ++  S        RL    +MAPE     V    + +
Sbjct: 179 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDCV---YTVQ 234
Query: 236 TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
           +D W +G  + E+ + G+ P+ G  V   ++ +V    +   P+  P  + +++  C+  
Sbjct: 235 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 294
Query: 295 DLRNRPLMADI 305
           +  +RP    I
Sbjct: 295 EPTHRPTFQQI 305

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           DFGI   +     S    A  +GT  Y++PEQ     RG  +   +D +  GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
           G  P+ G S   + +  V  +E P  PS    GL   ++ V++     +  NR      +
Sbjct: 215 GEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
            AD+  +H  E  +   V  D E T L S A  + S
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
           DFGI   +     S +  A  +GT  Y++PEQ     RG  +   +D +  GC + E+LT
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 231
Query: 251 GIQPWFGKS-VEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR 299
           G  P+ G S V   Y  V   +E P  PS    GL   ++ V++     +  NR
Sbjct: 232 GEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALAKNPENR 282

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 18/210 (8%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   +        ++AVK +   K+   ++  N  E +  +     +
Sbjct: 52  KIGEGSTGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFN--EVVIMRDYHHDN 103
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQ 160
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRKXLVGTPYWMAPEVIS--- 214
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
           R P   E D W  G  ++EM+ G  P+F +
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
           PD +    Q+A G+  L S                +   + + D G     L R +  +D
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG-----LFREVYAAD 182
Query: 209 MALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
               LG  N + P +W   E  + G  S ++D W +G  + E+ + G+QP+ G S +++ 
Sbjct: 183 YYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
             +  ++  PC P   P  V  ++I C+      RP   DI
Sbjct: 241 EMIRNRQVLPC-PDDCPAWVYALMIECWNEFPSRRPRFKDI 280

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLL 199
           Q R   L L  ++ Y  QL+  ++ L S                 +D + LGDFG     
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG----- 536
Query: 200 LGRSLSDSDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT- 250
           L R + DS    A +   P  +MAPE         I+F      +D W FG  + E+L  
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           G++P+ G    ++   +   +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 43/288 (14%)
Query: 43  TSLKLKHRIGRGPFGDVWLA--------THHQSADDFDEYHELAVKMLLPLKEDCAKVFV 94
            + +++ +IGRG F +V+ A           +    FD     A       + DC K  +
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA-------RADCIKE-I 83
Query: 95  NKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--I 151
           +  ++L        +V   +   + + ++ I ++  + G +   I   +  K  +P+  +
Sbjct: 84  DLLKQL-----NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
            +Y +QL   +  +HS                    + LGD G     LGR  S    A 
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-----LGRFFSSKTTAA 193
Query: 212 R--LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
              +GTP YM+PE+         +F++D W  GC + EM     P++G  +    +S+  
Sbjct: 194 HSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCK 248
Query: 270 KKEK---PCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ 313
           K E+   P +PS      +  ++  C   D   RP   D+ + ++ ++
Sbjct: 249 KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP---DVTYVYDVAK 293

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 34/278 (12%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
           I    ++L   IG G FGDV     HQ      E   +AV   +   ++C    V  KF 
Sbjct: 7   IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPAMAVA--IKTCKNCTSDSVREKFL 59
Query: 98  -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
            E L  +  +   +  L G+ +    + I M+           Q R   L L  ++ Y  
Sbjct: 60  QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
           QL+  ++ L S                  D + LGDFG     L R + DS    A +  
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG-----LSRYMEDSTYYKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
            P  +MAPE         I+F      +D W FG  + E+L  G++P+ G    ++   +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
              +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 60
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 118
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 177
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 178 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 206

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
           S  V  L GI + +    +      G + D + + RG +L   D+L + +Q+AKG+S L 
Sbjct: 78  SPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRG-RLGSQDLLNWCMQIAKGMSYLE 136
Query: 167 SIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW-- 224
            +                 + + + DFG+  LL    + +++     G      P +W  
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL---DIDETEYHADGGK----VPIKWMA 189
Query: 225 -EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
            E  +R   + ++D W +G ++ E++T G +P+ G    EI   ++ K E+   P     
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLEKGERLPQPPICTI 248
Query: 283 AVENVIIGCFEYDLRNRPLMADILHAF 309
            V  +++ C+  D   RP   +++  F
Sbjct: 249 DVYMIMVKCWMIDSECRPRFRELVSEF 275

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEIXINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEIXINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
           PD +    Q+A G+  L S                +   + + D G     L R +  +D
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG-----LFREVYAAD 199
Query: 209 MALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
               LG  N + P +W   E  + G  S ++D W +G  + E+ + G+QP+ G S +++ 
Sbjct: 200 YYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
             +  ++  PC P   P  V  ++I C+      RP   DI
Sbjct: 258 EMIRNRQVLPC-PDDCPAWVYALMIECWNEFPSRRPRFKDI 297

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEIXINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
           L   +G G +G+V LA +  + +       +AVK++ +    DC +    K E    K  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             ++V   +G         + +++  G  + DRI    G  +P PD  R+  QL  G+  
Sbjct: 62  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
           LH IG              E D L + DFG+  +    +  +  +    GT  Y+APE  
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
           +   R     E  D W  G  +  ML G  PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   S         +AVK +   K+   ++  N  E +  +  + ++
Sbjct: 31  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 82
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 83  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 139
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 193
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
           R P   E D W  G  ++EM+ G  P+F +            K    I   LPP ++N+
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 243

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   S         +AVK +   K+   ++  N  E +  +  + ++
Sbjct: 27  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 78
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 135
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 189
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
           R P   E D W  G  ++EM+ G  P+F +            K    I   LPP ++N+
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 239

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   S         +AVK +   K+   ++  N  E +  +  + ++
Sbjct: 36  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 87
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 88  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 144
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 198
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
           R P   E D W  G  ++EM+ G  P+F +            K    I   LPP ++N+
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 248

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLL 199
           Q R   L L  ++ Y  QL+  ++ L S                  D + LGDFG     
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG----- 536
Query: 200 LGRSLSDSDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT- 250
           L R + DS    A +   P  +MAPE         I+F      +D W FG  + E+L  
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           G++P+ G    ++   +   +  P +P   PP + +++  C+ YD   RP   ++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   S         +AVK +   K+   ++  N  E +  +  + ++
Sbjct: 38  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 89
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 90  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 146
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 200
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
           R P   E D W  G  ++EM+ G  P+F +            K    I   LPP ++N+
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 250

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   S         +AVK +   K+   ++  N  E +  +  + ++
Sbjct: 81  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 132
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 189
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 243
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
           R P   E D W  G  ++EM+ G  P+F +            K    I   LPP ++N+
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 293

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
           R+  P ++APE  + +         D W F   + E++T   P+   S  EI   V ++ 
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG 227
Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
            +P IP G+ P V  ++  C   D   RP    I+   E  Q+
Sbjct: 228 LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXX 181
           I + M++ +G  + DRI  +      L  IL +  Q+ +GI  +H +             
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHLDLKPENIL 219
Query: 182 XXEHD--QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTW 239
               D  Q+ + DFG    L  R      + +  GTP ++APE    +    +SF TD W
Sbjct: 220 CVNRDAKQIKIIDFG----LARRYKPREKLKVNFGTPEFLAPEVVNYDF---VSFPTDMW 272
Query: 240 GFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
             G     +L+G+ P+ G +  E  ++++
Sbjct: 273 SVGVIAYMLLSGLSPFLGDNDAETLNNIL 301

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           G + DRI    G  +P PD  R+  QL  G+  LH IG              E D L + 
Sbjct: 89  GELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFE-TDTWGFGCSIMEMLT 250
           DFG+  +    +  +  +    GT  Y+APE  +   R     E  D W  G  +  ML 
Sbjct: 147 DFGLATVFRYNN-RERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLA 202
Query: 251 GIQPW 255
           G  PW
Sbjct: 203 GELPW 207

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 25/274 (9%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
           ++   LKL   IG+G FGDV L  +  +        ++AVK +   K D  A+ F+ +  
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRGN--------KVAVKCI---KNDATAQAFLAE-A 237
Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
            +  + R S  V  L  I    G + I  ++  +GS+ D +  +    L    +L++ + 
Sbjct: 238 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           + + +  L                  E +   + DFG     L +  S +    +L    
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPV-K 351
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE    +     S ++D W FG  + E+ + G  P+    ++++   V  K  K   
Sbjct: 352 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 407
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           P G PPAV +V+  C+  D   RP    +    E
Sbjct: 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 107/278 (38%), Gaps = 23/278 (8%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL-PLKEDCAKVFVNKFE 98
           ++   L L  +IGRG FG+V+  +    AD+      +AVK     L  D    F+ +  
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVF--SGRLRADN----TLVAVKSCRETLPPDLKAKFLQEAR 164
Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
            L  K     ++  L G+      I I M+  +G       +  G +L +  +L+     
Sbjct: 165 IL--KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA----LRLG 214
           A G+  L S                E + L + DFG     + R  +D   A    LR  
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG-----MSREEADGVYAASGGLRQV 277
Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK 273
              + APE       G  S E+D W FG  + E  + G  P+   S ++    V      
Sbjct: 278 PVKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           PC P   P AV  ++  C+ Y+   RP  + I    +S
Sbjct: 335 PC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 27/239 (11%)
Query: 32  TPTQTRPWIDPTSLK-------LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP 84
           +P ++   ID ++L+       L   +G G +G V+   H ++        +LA   ++ 
Sbjct: 6   SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-------QLAAIKVMD 58
Query: 85  LKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV------INGKICIAMKFY-EGSVGDR 137
           +  D  +    +   +  K+   +++   +G  +      ++ ++ + M+F   GSV D 
Sbjct: 59  VTGDEEEEIKQEIN-MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY 197
           I   +G  L    I     ++ +G+S LH                 E+ ++ L DFG+  
Sbjct: 118 IKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS- 176
Query: 198 LLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
             L R++   +  +  GTP +MAPE    +        F++D W  G + +EM  G  P
Sbjct: 177 AQLDRTVGRRNTFI--GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 21/277 (7%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++   L L  +IGRG FG+V+  +    AD+     +   + L P   D    F+ +   
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVF--SGRLRADNTLVAVKSCRETLPP---DLKAKFLQEARI 165
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           L  K     ++  L G+      I I M+  +G       +  G +L +  +L+     A
Sbjct: 166 L--KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA----LRLGT 215
            G+  L S                E + L + DFG     + R  +D   A    LR   
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG-----MSREEADGVXAASGGLRQVP 278
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
             + APE       G  S E+D W FG  + E  + G  P+   S ++    V      P
Sbjct: 279 VKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP 335
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           C P   P AV  ++  C+ Y+   RP  + I    +S
Sbjct: 336 C-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V LA    S        ++AVKM+   K+   ++  N  E +  +  +  +
Sbjct: 52  KIGEGSTGIVCLAREKHSG------RQVAVKMMDLRKQQRRELLFN--EVVIMRDYQHFN 103
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F +G ++ D ++Q R  +  +  +    +Q    ++ LH+ 
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQ---ALAYLHAQ 160
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMAPEQWE 225
           G                 ++ L DFG    +        D+  R   +GTP +MAPE   
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPEVIS 214
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS 259
              R   + E D W  G  ++EM+ G  P+F  S
Sbjct: 215 ---RSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
           G + DRI    G  +P PD  R+  QL  G+  LH IG              E D L + 
Sbjct: 90  GELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFE-TDTWGFGCSIMEMLT 250
           DFG+  +    +  +  +    GT  Y+APE  +   R     E  D W  G  +  ML 
Sbjct: 148 DFGLATVFRYNN-RERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLA 203
Query: 251 GIQPW 255
           G  PW
Sbjct: 204 GELPW 208

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 103/273 (37%), Gaps = 27/273 (9%)
Query: 40  IDPTSLK---LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           +DP  L+   L   IGRG +  V L    ++    D  + + V     + +D    +V  
Sbjct: 3   MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKT----DRIYAMKVVKKELVNDDEDIDWVQT 58
Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYG 155
            + +F +      +  LH       ++   +++  G  GD +   QR  KLP      Y 
Sbjct: 59  EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYS 116
Query: 156 IQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-G 214
            +++  ++ LH  G                  + L D+G    +    L   D      G
Sbjct: 117 AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSXFCG 172
Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHS 266
           TPNY+APE    E  G   F  D W  G  + EM+ G  P+          ++ E+    
Sbjct: 173 TPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           V+++K+   IP  L     +V+      D + R
Sbjct: 230 VILEKQIR-IPRSLSVKAASVLKSFLNKDPKER 261

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 4   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 61
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 62  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 118
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFG-----LTKVLPQDKEYYK 173
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 233
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 234 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 18/287 (6%)
Query: 25  HLRTVVATPTQTRPWIDPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
           H    V  P       DP  L  K  RIG+G FG+V+    +++        ++    ++
Sbjct: 4   HSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRT-------QQVVAIKII 56
Query: 84  PLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG 143
            L+E   ++   + E       +S  V   +G  +   K+ I M++  G  G  +   R 
Sbjct: 57  DLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGG--GSALDLLRA 114
Query: 144 GKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRS 203
           G      I     ++ KG+  LHS                E   + L DFG+   L    
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 174
Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
           +  +     +GTP +MAPE  +   +     + D W  G + +E+  G  P        +
Sbjct: 175 IKRNTF---VGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 228
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
              ++ K   P +      + +  I  C   D   RP   ++L H F
Sbjct: 229 LF-LIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+  G+  LHS G               +  + + DFG+   L    +         GTP
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL---KMPHEKHYTLCGTP 176
Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
           NY++PE       G    E+D W  GC    +L G  P+   +V+   + VV+   +  +
Sbjct: 177 NYISPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE--M 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAFESSQNAVYNDGE 321
           PS L    +++I      +  +R  ++ +L H F S  ++  +  E
Sbjct: 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDE 277

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 10  DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 67
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 68  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 124
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 179
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 239
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 240 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 3   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 60
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 61  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 117
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEFFK 172
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 8   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 65
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 66  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 122
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 177
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 237
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 238 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
           +IG G  G V +AT   S         +AVK +   K+   ++  N  E +  +  + ++
Sbjct: 158 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 209
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
           V  ++   ++  ++ + M+F EG ++ D +   R  +     I    + + + +S LH+ 
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 266
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           G                 ++ L DFG    +   S         +GTP +MAPE      
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 320
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
           R P   E D W  G  ++EM+ G  P+F +            K    I   LPP ++N+
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 370

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 34  DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 91
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 92  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 148
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 203
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 263
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 264 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 33/289 (11%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 6   DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 63
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
           + E L  K  +  ++    G+    G+  + + M+F          Q+   ++    +L+
Sbjct: 64  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y  Q+ KG+  L +                  +++ +GDFG     L + L       ++
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXKV 176
Query: 214 GTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE--------- 262
             P       + PE       S  +D W FG  + E+ T I+       E          
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 263 ----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
               ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 9   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 66
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 67  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 123
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 178
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 238
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 239 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 7   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 64
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 65  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 121
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 176
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 236
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 237 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 3   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 60
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 61  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 117
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 172
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 6   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 63
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 64  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 120
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 175
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
           R+GRG FG+V     H+  D    + + AVK +        ++ V + EEL       S 
Sbjct: 65  RVGRGSFGEV-----HRMKDKQTGF-QCAVKKV--------RLEVFRVEELVACAGLSSP 110
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            +  L+G       + I M+  EG S+G  I Q   G LP    L Y  Q  +G+  LH+
Sbjct: 111 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT 168
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
                            +  +  L DFG    L    LG+SL   D     GT  +MAPE
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 226
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPW 255
                V G P   + D W   C ++ ML G  PW
Sbjct: 227 V----VMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 1   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 58
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 59  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 115
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 170
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 230
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 231 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
           R+GRG FG+V     H+  D    + + AVK +        ++ V + EEL       S 
Sbjct: 81  RVGRGSFGEV-----HRMKDKQTGF-QCAVKKV--------RLEVFRVEELVACAGLSSP 126
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            +  L+G       + I M+  EG S+G  I Q   G LP    L Y  Q  +G+  LH+
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT 184
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
                            +  +  L DFG    L    LG+SL   D     GT  +MAPE
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 242
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPW 255
                V G P   + D W   C ++ ML G  PW
Sbjct: 243 V----VMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 2   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 59
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 60  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 116
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 171
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 231
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 232 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 114/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 6   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 63
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q    ++    +L
Sbjct: 64  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLL 120
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 175
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 43/103 (41%)
Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
           R   P ++APE  + +         D W F   + E++T   P+   S  EI   V ++ 
Sbjct: 168 RXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEG 227
Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
            +P IP G+ P V  +   C   D   RP    I+   E  Q+
Sbjct: 228 LRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40  IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
           IDP+ L     IG G FG V    WL               S DDF E  E+ +K+  P 
Sbjct: 24  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHP- 82
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
                                   +  L+G+ +    IC+  +F E G + D +  QR G
Sbjct: 83  -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 118
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
                 +L   + + +G++ L                  E+  + + DFG+   +L    
Sbjct: 119 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 178
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + S      GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S 
Sbjct: 179 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 230
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E+   +    +  KP + S     V  ++  C++    +RP  + +L
Sbjct: 231 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 275

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 38/282 (13%)
Query: 40  IDPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
           +DP  L  K  RIG+G FG+V+    + +        E+    ++ L+E   ++   + E
Sbjct: 15  VDPEELFTKLDRIGKGSFGEVYKGIDNHTK-------EVVAIKIIDLEEAEDEIEDIQQE 67
Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
                  +S  +    G  + + K+ I M++  G  G  +   + G L    I     ++
Sbjct: 68  ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILREI 125
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTP 216
            KG+  LHS                E   + L DFG+        L+D+ +     +GTP
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGV-----AGQLTDTQIKRNXFVGTP 180
Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
            +MAPE  +   +    F+ D W  G + +E+  G  P       +++   V+      I
Sbjct: 181 FWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPP-----NSDLHPMRVLF----LI 228
Query: 277 PSGLPPAVE--------NVIIGCFEYDLRNRPLMADIL-HAF 309
           P   PP +E          +  C   D R RP   ++L H F
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41  DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           DPT  + +H     ++G+G FG V +  +    D+  E   +AVK L    E+  + F  
Sbjct: 3   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 60
Query: 96  KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
           + E L  K  +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L
Sbjct: 61  EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 117
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
           +Y  Q+ KG+  L +                  +++ +GDFG     L + L       +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 172
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
           +  P       + PE       S  +D W FG  + E+ T I+       E         
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                ++H + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 31/277 (11%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
           ++   LKL   IG+G FGDV L  +          +++AVK +   K D  A+ F+ +  
Sbjct: 9   LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCI---KNDATAQAFLAE-A 56
Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
            +  + R S  V  L  I    G + I  ++  +GS+ D +  +    L    +L++ + 
Sbjct: 57  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 116
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           + + +  L                  E +   + DFG     L +  S +    +L    
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKL---- 167
Query: 218 YMAPEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK 273
              P +W  PE     +F T  D W FG  + E+ + G  P+    ++++   V  K  K
Sbjct: 168 ---PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYK 223
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
              P G PPAV  V+  C+  D   RP    +    E
Sbjct: 224 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 260

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG +  V L    ++    D  + + V     + +D    +V   + +F +      +
Sbjct: 13  IGRGSYAKVLLVRLKKT----DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
             LH       ++   +++  G  GD +   QR  KLP      Y  +++  ++ LH  G
Sbjct: 69  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 170 XXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
                             + L D+G    +    L   D      GTPNY+APE    E 
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHSVVIKKEKPCIPSGL 280
            G   F  D W  G  + EM+ G  P+          ++ E+    V+++K+   IP  L
Sbjct: 183 YG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSL 238
Query: 281 PPAVENVIIGCFEYDLRNR 299
                +V+      D + R
Sbjct: 239 SVKAASVLKSFLNKDPKER 257

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
           R+GRG FG+V     H+  D    + + AVK +        ++ V + EEL       S 
Sbjct: 79  RLGRGSFGEV-----HRMKDKQTGF-QCAVKKV--------RLEVFRVEELVACAGLSSP 124
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            +  L+G       + I M+  EG S+G  I Q   G LP    L Y  Q  +G+  LH+
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT 182
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
                            +  +  L DFG    L    LG+SL   D     GT  +MAPE
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 240
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPW 255
                V G P   + D W   C ++ ML G  PW
Sbjct: 241 V----VMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40  IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
           IDP+ L     IG G FG V    WL               S +DF E  E+ +K+  P 
Sbjct: 4   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 62
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
                                   +  L+G+ +    IC+  +F E G + D +  QR G
Sbjct: 63  -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 98
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
                 +L   + + +G++ L                  E+  + + DFG+   +L    
Sbjct: 99  LFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + S      GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S 
Sbjct: 159 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E+   +    +  KP + S     V  ++  C++    +RP  + +L
Sbjct: 211 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 255

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG +  V L    ++    D  + + V     + +D    +V   + +F +      +
Sbjct: 60  IGRGSYAKVLLVRLKKT----DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
             LH       ++   +++  G  GD +   QR  KLP      Y  +++  ++ LH  G
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 170 XXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
                             + L D+G    +    L   D      GTPNY+APE    E 
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHSVVIKKEKPCIPSGL 280
            G   F  D W  G  + EM+ G  P+          ++ E+    V+++K+   IP  L
Sbjct: 230 YG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSL 285
Query: 281 PPAVENVIIGCFEYDLRNR 299
                +V+      D + R
Sbjct: 286 SVKAASVLKSFLNKDPKER 304

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 30/281 (10%)
Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
           LK   ++G+G FG V +  +    D+  E   +AVK L    E+  + F  + E L  K 
Sbjct: 30  LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIEIL--KS 85
Query: 105 RESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
            +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L+Y  Q+ KG
Sbjct: 86  LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKG 144
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           +  L +                  +++ +GDFG     L + L       ++  P     
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXKVKEPGESPI 199
Query: 222 EQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------------IYHS 266
             + PE       S  +D W FG  + E+ T I+       E              ++H 
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 267 VVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 25/274 (9%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
           ++   LKL   IG+G FGDV L  +          +++AVK +   K D  A+ F+ +  
Sbjct: 18  LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCI---KNDATAQAFLAE-A 65
Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
            +  + R S  V  L  I    G + I  ++  +GS+ D +  +    L    +L++ + 
Sbjct: 66  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           + + +  L                  E +   + DFG     L +  S +    +L    
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPV-K 179
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE    +     S ++D W FG  + E+ + G  P+    ++++   V  K  K   
Sbjct: 180 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 235
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           P G PPAV  V+  C+  D   RP    +    E
Sbjct: 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 122 KICIAMKFYEGSVGDRIAQQRGG-KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXX 180
           +I + M + EG  G+  +  R   + P P    Y  ++   +  LHS             
Sbjct: 80  QIFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENI 137
Query: 181 XXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
              ++  + + DFG       + + D    L  GTP+Y+APE    +   P +   D W 
Sbjct: 138 LLDKNGHIKITDFG-----FAKYVPDVTYXL-CGTPDYIAPEVVSTK---PYNKSIDWWS 188
Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           FG  I EML G  P++  +  + Y  ++  + +   P      V++++      DL  R 
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQR- 245
Query: 301 LMADILHAFESSQNAV-YNDGEWTGLGSRAL 330
            + ++ +  E  +N   + +  W  L SR +
Sbjct: 246 -LGNLQNGTEDVKNHPWFKEVVWEKLLSRNI 275

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 30/281 (10%)
Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
           LK   ++G+G FG V +  +    D+  E   +AVK L    E+  + F  + E L  K 
Sbjct: 30  LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIEIL--KS 85
Query: 105 RESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
            +  ++    G+    G+  + + M++   GS+ D + Q+   ++    +L+Y  Q+ KG
Sbjct: 86  LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKG 144
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           +  L +                  +++ +GDFG     L + L       ++  P     
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXKVKEPGESPI 199
Query: 222 EQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------------IYHS 266
             + PE       S  +D W FG  + E+ T I+       E              ++H 
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 267 VVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           + + K    +  P G P  +  ++  C+  ++  RP   D+
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 29/249 (11%)
Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML--LPLKEDCAKVFVNKFEELFPKF 104
           ++  +G G FG V LATH+++        ++A+K +    LK+    + V + E  + K 
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQ------QKVALKFISRQLLKKSDMHMRVER-EISYLKL 65
Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
                +  L+ +      I + +++  G + D I +++  ++   +  R+  Q+   I  
Sbjct: 66  LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEY 123
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQ 223
            H                 ++  + + DFG     L   ++D + +    G+PNY APE 
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFG-----LSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 224 WEPEVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI---PSG 279
              ++  GP   E D W  G  +  ML G  P+  + +  ++     KK   C+   P  
Sbjct: 179 INGKLYAGP---EVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----KKVNSCVYVMPDF 230
Query: 280 LPPAVENVI 288
           L P  +++I
Sbjct: 231 LSPGAQSLI 239

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 116/300 (38%), Gaps = 32/300 (10%)
Query: 33  PTQ---TRPWIDP-TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED 88
           PTQ      W  P  +L+    +G G FG V  AT      + D   ++AVKML      
Sbjct: 17  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE-DAVLKVAVKMLKSTAHA 75
Query: 89  CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-------------EGSVG 135
             K  +    ++     + +++  L G     G + +  ++              E  +G
Sbjct: 76  DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 136 DRIA---------QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHD 186
             +A         ++ G  L L D+L +  Q+A+G++ L S                   
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 195
Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
              +GDFG+   ++  S        RL    +MAPE     V    + ++D W +G  + 
Sbjct: 196 VAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLW 251
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           E+ + G+ P+ G  V   ++ +V    +   P+  P  + +++  C+  +  +RP    I
Sbjct: 252 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG +  V L    ++    D  + + V     + +D    +V   + +F +      +
Sbjct: 28  IGRGSYAKVLLVRLKKT----DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
             LH       ++   +++  G  GD +   QR  KLP      Y  +++  ++ LH  G
Sbjct: 84  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 170 XXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
                             + L D+G    +    L   D      GTPNY+APE    E 
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHSVVIKKEKPCIPSGL 280
            G   F  D W  G  + EM+ G  P+          ++ E+    V+++K+   IP  +
Sbjct: 198 YG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSM 253
Query: 281 PPAVENVIIGCFEYDLRNR 299
                +V+      D + R
Sbjct: 254 SVKAASVLKSFLNKDPKER 272

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40  IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
           IDP+ L     IG G FG V    WL               S +DF E  E+ +K+  P 
Sbjct: 4   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 62
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
                                   +  L+G+ +    IC+  +F E G + D +  QR G
Sbjct: 63  -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 98
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
                 +L   + + +G++ L                  E+  + + DFG+   +L    
Sbjct: 99  LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + S      GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S 
Sbjct: 159 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E+   +    +  KP + S     V  ++  C++    +RP  + +L
Sbjct: 211 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 255

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 25/274 (9%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
           ++   LKL   IG+G FGDV L  +          +++AVK +   K D  A+ F+ +  
Sbjct: 3   LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCI---KNDATAQAFLAE-A 50
Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
            +  + R S  V  L  I    G + I  ++  +GS+ D +  +    L    +L++ + 
Sbjct: 51  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           + + +  L                  E +   + DFG     L +  S +    +L    
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPV-K 164
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE    +     S ++D W FG  + E+ + G  P+    ++++   V  K  K   
Sbjct: 165 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 220
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           P G PPAV  V+  C+  D   RP    +    E
Sbjct: 221 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 254

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40  IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
           IDP+ L     IG G FG V    WL               S +DF E  E+ +K+  P 
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 60
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
                                   +  L+G+ +    IC+  +F E G + D +  QR G
Sbjct: 61  -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 96
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
                 +L   + + +G++ L                  E+  + + DFG+   +L    
Sbjct: 97  LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + S      GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S 
Sbjct: 157 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E+   +    +  KP + S     V  ++  C++    +RP  + +L
Sbjct: 209 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 253

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 19/222 (8%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML---LPLKEDCAKVFVNKFEELFPKFRES 107
           +G+G FG V LA   ++ D +      AVK+L   + L++D  +  + + + +    R  
Sbjct: 31  LGKGSFGKVMLARVKETGDLY------AVKVLKKDVILQDDDVECTMTE-KRILSLARNH 83
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLH 166
             +  L        ++   M+F  G  GD +   Q+  +        Y  ++   +  LH
Sbjct: 84  PFLTQLFCCFQTPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 167 SIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
             G                    L DFG+    +   ++ +      GTP+Y+APE  + 
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC---GTPDYIAPEILQE 198
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
            + GP     D W  G  + EML G  P+  ++ ++++ +++
Sbjct: 199 MLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 57/288 (19%)
Query: 40  IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
           IDP+ L     IG G FG V    WL               S +DF E  E+ +K+  P 
Sbjct: 7   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 65
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
                                   +  L+G+ +    IC+  +F E G + D +  QR G
Sbjct: 66  -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 101
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
                 +L   + + +G++ L                  E+  + + DFG+   +L    
Sbjct: 102 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + S      GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S 
Sbjct: 162 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 213
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E+   +    +  KP + S     V  ++  C+     +RP  + +L
Sbjct: 214 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLL 258

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 119/311 (38%), Gaps = 38/311 (12%)
Query: 22  DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
           DPD L         P     W  P   LKL   +GRG FG V  A      D       +
Sbjct: 4   DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATXRTV 62
Query: 78  AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
           AVKM   LKE       +  +++ + L         V  L   +   G + + ++F + G
Sbjct: 63  AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 133 SVGDRIAQQRGGKLP------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXX 180
           ++   +  +R   +P            L  ++ Y  Q+AKG+  L S             
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNI 179
Query: 181 XXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFET 236
              E + + + DFG     L R +      +R G       +MAPE     V    + ++
Sbjct: 180 LLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---YTIQS 231
Query: 237 DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD 295
           D W FG  + E+ + G  P+ G  ++E +   + +  +   P    P +   ++ C+  +
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 291
Query: 296 LRNRPLMADIL 306
              RP  ++++
Sbjct: 292 PSQRPTFSELV 302

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           LG   +MAPE    E     + + DT+ F   +  +LTG  P+   S  +I    +I++E
Sbjct: 187 LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 273 --KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
             +P IP   PP + NVI  C+  D + RP  + I+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           LG   +MAPE    E     + + DT+ F   +  +LTG  P+   S  +I    +I++E
Sbjct: 187 LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 273 --KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
             +P IP   PP + NVI  C+  D + RP  + I+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           LG   +MAPE    E     + + DT+ F   +  +LTG  P+   S  +I    +I++E
Sbjct: 187 LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 273 --KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
             +P IP   PP + NVI  C+  D + RP  + I+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 57/288 (19%)
Query: 40  IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
           IDP+ L     IG G FG V    WL               S +DF E  E+ +K+  P 
Sbjct: 5   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 63
Query: 86  KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
                                   +  L+G+ +    IC+  +F E G + D +  QR G
Sbjct: 64  -----------------------KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-G 99
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
                 +L   + + +G++ L                  E+  + + DFG+   +L    
Sbjct: 100 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
           + S      GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S 
Sbjct: 160 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 211
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            E+   +    +  KP + S     V  ++  C+     +RP  + +L
Sbjct: 212 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLL 256

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALR-LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
           LGDFG+  +L      D D A   +GTP YM+PEQ     R   + ++D W  GC + E+
Sbjct: 157 LGDFGLARILN----HDEDFAKEFVGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYEL 209
Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
              + P+   S +E+   +   K +  IP      +  +I         +RP + +IL
Sbjct: 210 CALMPPFTAFSQKELAGKIREGKFRR-IPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 190 LGDFGIPYLLLGRSLSDSDMAL--RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
           LGDFG+        L +S +    R+GTP++MAPE  +   R P     D WG G  +  
Sbjct: 174 LGDFGVAI-----QLGESGLVAGGRVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFI 225
Query: 248 MLTGIQPWFGKSVEEIYHSVVIKKEK 273
           +L+G  P++G + E ++  ++  K K
Sbjct: 226 LLSGCLPFYG-TKERLFEGIIKGKYK 250

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 49  HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
           +++G G FG V+    + +         +AVK L  + +   +    +F++      + Q
Sbjct: 37  NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 109 --SVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ--LAKGIS 163
             ++  L G S     +C+   +   GS+ DR++   G   PL   +R  I    A GI+
Sbjct: 89  HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 147
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPE 222
            LH                 E     + DFG+         + + M  R+ GT  YMAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXXRIVGTTAYMAPE 205
Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
                +RG I+ ++D + FG  ++E++TG+
Sbjct: 206 A----LRGEITPKSDIYSFGVVLLEIITGL 231

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 101/263 (38%), Gaps = 39/263 (14%)
Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
           R+GRG FG+V         +D     + AVK +        ++ V + EEL       S 
Sbjct: 100 RLGRGSFGEV------HRMEDKQTGFQCAVKKV--------RLEVFRAEELMACAGLTSP 145
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
            +  L+G       + I M+  EG S+G  + +Q  G LP    L Y  Q  +G+  LHS
Sbjct: 146 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHS 203
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
                            +     L DFG    L    LG+SL   D     GT  +MAPE
Sbjct: 204 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP--GTETHMAPE 261
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH---SVVIKKEKPCIPS 278
                V G     + D W   C ++ ML G  PW      + +     + I  E P +  
Sbjct: 262 V----VLGRSCDAKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVRE 312
Query: 279 GLPPAVENVIIGCFEYDLRNRPL 301
            +PP+   +     +  LR  P+
Sbjct: 313 -IPPSCAPLTAQAIQEGLRKEPI 334

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKF- 97
           I      L   +G+G FG V  A   Q    F    ++AVKML   K D  A   + +F 
Sbjct: 20  IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSF---VKVAVKML---KADIIASSDIEEFL 73
Query: 98  -EELFPKFRESQSVCWLHGISV---INGKICIAMKFY----EGSVGDRIAQQRGGK---- 145
            E    K  +   V  L G+S+     G++ I M        G +   +   R G+    
Sbjct: 74  REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
           LPL  ++R+ + +A G+  L S                E   + + DFG     L R + 
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG-----LSRKIY 188
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
             D   R G  + + P +W   E       +  +D W FG ++ E++T G  P+ G    
Sbjct: 189 SGDY-YRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA 246
Query: 262 EIYHSVV----IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
           EIY+ ++    +K+   C+       V +++  C+  D + RP
Sbjct: 247 EIYNYLIGGNRLKQPPECMEE-----VYDLMYQCWSADPKQRP 284

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G FG+V+LA   QS         LA+K+L   + + A V     E    +  E QS 
Sbjct: 21  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 69
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                I  + G    A + Y        G+V   +  Q+  K        Y  +LA  +S
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 127
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             HS                   +L + DFG  + +   S   +D+    GT +Y+ PE 
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 182
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
            E  +      + D W  G    E L G  P+   + +E Y    I + +   P  +   
Sbjct: 183 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 237
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
             ++I    +++   RP++ ++L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G FG+V+LA   QS         LA+K+L   + + A V     E    +  E QS 
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                I  + G    A + Y        G+V   +  Q+  K        Y  +LA  +S
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             HS                   +L + DFG  + +   S   +D+    GT +Y+ PE 
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
            E  +      + D W  G    E L G  P+   + +E Y    I + +   P  +   
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
             ++I    +++   RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G FG+V+LA   QS         LA+K+L   + + A V     E    +  E QS 
Sbjct: 17  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 65
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                I  + G    A + Y        G+V   +  Q+  K        Y  +LA  +S
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 123
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             HS                   +L + DFG  + +   S   +D+    GT +Y+ PE 
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 178
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
            E  +      + D W  G    E L G  P+   + +E Y    I + +   P  +   
Sbjct: 179 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 233
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
             ++I    +++   RP++ ++L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G FG+V+LA   QS         LA+K+L   + + A V     E    +  E QS 
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                I  + G    A + Y        G+V   +  Q+  K        Y  +LA  +S
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             HS                   +L + DFG  + +   S   +D+    GT +Y+ PE 
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
            E  +      + D W  G    E L G  P+   + +E Y    I + +   P  +   
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
             ++I    +++   RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	632
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-39
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-39
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-37
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-37
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-36
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-36
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-36
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-35
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-35
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-34
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-34
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-33
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-32
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-31
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-31
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-31
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-31
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-30
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-30
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-29
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-29
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-28
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-28
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-28
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-27
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-27
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-27
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-27
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-27
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-26
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-26
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-25
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-25
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-24
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-24
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-24
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-24
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-23
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-23
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-23
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-22
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-22
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-22
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-21
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-21
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-21
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-21
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-21
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-21
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-21
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	8e-21
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-20
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-20
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-20
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-20
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-20
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-20
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-20
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-20
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-20
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-20
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-20
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-20
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-19
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-19
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-19
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-19
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-19
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-19
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-19
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-19
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-19
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-19
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-19
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-19
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-19
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-19
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-18
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-18
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-18
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-18
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-18
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-18
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-18
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-18
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-18
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-18
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-18
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-18
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-18
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-18
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-18
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-18
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-17
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-17
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-17
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-17
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-17
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-17
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-17
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-17
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-17
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-17
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-17
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-17
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	7e-17
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-17
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-17
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-17
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	9e-17
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-16
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-16
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-16
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-16
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-16
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-16
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-16
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-16
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-16
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-16
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-16
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-16
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-16
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-16
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-15
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-15
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-15
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-15
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-15
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-15
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-15
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-15
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-15
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-15
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-14
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-14
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-14
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-14
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-14
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-14
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-14
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-14
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-14
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-14
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-14
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-13
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-13
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-13
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-13
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-13
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-13
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-13
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	9e-13
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-12
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-11
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-11
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-11
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-11
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	9e-11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-10
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-10
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-10
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-10
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-10
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	7e-10
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-08
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-08
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-08
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-08
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-08
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-08
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-08
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-07
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-07
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	5e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-06
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	5e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-05
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	8e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-04

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  143 bits (364), Expect = 5e-39
 Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 37  RPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           +   ID   L    ++     G++W      +        ++ VK+L     D +     
Sbjct: 3   KHSGIDFKQLNFLTKLNENHSGELWKGRWQGN--------DIVVKVLKV--RDWSTRKSR 52

Query: 96  KFEELFPKFRESQ--SVCWLHGISV--INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
            F E  P+ R     +V  + G           +   +   GS+ + + +     +    
Sbjct: 53  DFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQ 112

Query: 151 ILRYGIQLAKGISDLHSIGLLVLN--LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD 208
            +++ + +A+G++ LH++  L+    L   ++++ E     +         +  S     
Sbjct: 113 AVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMAD-----VKFSFQSPG 167

Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
                  P ++APE  + +         D W F   + E++T   P+   S  EI   V 
Sbjct: 168 RM---YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA 224

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
           ++  +P IP G+ P V  ++  C   D   RP    I+   E  Q+
Sbjct: 225 LEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  143 bits (364), Expect = 6e-39
 Identities = 62/274 (22%), Positives = 97/274 (35%), Gaps = 35/274 (12%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN-----------KFE 98
            IG G FG V+ A H              +K +     + A+  V             + 
Sbjct: 18  LIGSGGFGQVFKAKHRIDG------KTYVIKRV-KYNNEKAEREVKALAKLDHVNIVHYN 70

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQ 157
             +  F         +        + I M+F + G++   I ++RG KL     L    Q
Sbjct: 71  GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTP 216
           + KG+  +HS  L+  +LKPSN+ L +  Q+ +GDFG     L  SL +     R  GT 
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFG-----LVTSLKNDGKRTRSKGTL 185

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
            YM+PEQ           E D +  G  + E+L      F  S                I
Sbjct: 186 RYMSPEQIS---SQDYGKEVDLYALGLILAELLHVCDTAFETS------KFFTDLRDGII 236

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                   + ++         +RP  ++IL    
Sbjct: 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  140 bits (354), Expect = 2e-37
 Identities = 77/316 (24%), Positives = 130/316 (41%), Gaps = 35/316 (11%)

Query: 6   RAHKPAASFEYELFEGDPDHLRTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATH 64
             H P + ++       P                 I    L +K +IG G FG V  A  
Sbjct: 5   HHHHPMSDYD------IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW 58

Query: 65  HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVING 121
           H S        ++AVK+L+   +D     VN+F     +  + R   ++    G      
Sbjct: 59  HGS--------DVAVKILME--QDFHAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPP 107

Query: 122 KICIAMKFYE-GSVGDRI-AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVL--NLKP 177
            + I  ++   GS+   +       +L     L     +AKG++ LH+    ++  NLK 
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKS 167

Query: 178 SNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTPNYMAPEQWEPEVRGPISFE 235
            NLL+ +   + + DFG     L R  + + ++ +   GTP +MAPE    E   P + +
Sbjct: 168 PNLLVDKKYTVKVCDFG-----LSRLKASTFLSSKSAAGTPEWMAPEVLRDE---PSNEK 219

Query: 236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD 295
           +D + FG  + E+ T  QPW   +  ++  +V  K ++  IP  L P V  +I GC+  +
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNE 279

Query: 296 LRNRPLMADILHAFES 311
              RP  A I+     
Sbjct: 280 PWKRPSFATIMDLLRP 295

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  138 bits (351), Expect = 4e-37
 Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 24/282 (8%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVN 95
           W I    + +  RIG G FG V+    H          ++AVKML          + F N
Sbjct: 19  WEIPDGQITVGQRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKN 69

Query: 96  KFE-ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
             E  +  K R   ++    G      ++ I  ++ E  S+   +      K  +  ++ 
Sbjct: 70  --EVGVLRKTRH-VNILLFMGY-STAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLID 124

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
              Q A+G+  LH+  ++  +LK +N+ L E + + +GDFG+       S S     L  
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS- 183

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKE 272
           G+  +MAPE    +   P SF++D + FG  + E++TG  P+    + ++I   V     
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243

Query: 273 KPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            P    + S  P  ++ ++  C +     RP    IL   E 
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  137 bits (346), Expect = 4e-36
 Identities = 57/297 (19%), Positives = 117/297 (39%), Gaps = 25/297 (8%)

Query: 27  RTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP- 84
           R    T    + W I    L++   IG+G FG V+    H          E+A++++   
Sbjct: 16  RKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---------EVAIRLIDIE 66

Query: 85  -LKEDCAKVFVNKFE-ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQR 142
              ED  K F    E   + + R  ++V    G  +    + I     +G     + +  
Sbjct: 67  RDNEDQLKAFKR--EVMAYRQTR-HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA 123

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI--PYLLL 200
              L +    +   ++ KG+  LH+ G+L  +LK  N+   ++ ++V+ DFG+     +L
Sbjct: 124 KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVL 182

Query: 201 GRSLSDSDMALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
                +  + ++ G   ++APE          E + P S  +D +  G    E+     P
Sbjct: 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242

Query: 255 WFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           +  +  E I   +    +      G+   + ++++ C+ ++   RP    ++   E 
Sbjct: 243 FKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  136 bits (344), Expect = 7e-36
 Identities = 58/273 (21%), Positives = 105/273 (38%), Gaps = 42/273 (15%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPL--KEDCAKVF--VNKFEELFP-- 102
           R+G G +G+V+     +    +      AVK    P    +D A+    V   E++    
Sbjct: 64  RLGHGSYGEVFKVRSKEDGRLY------AVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 103 ---KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
              +  ++    W        G + +  +    S+     +  G  LP   +  Y     
Sbjct: 118 CCVRLEQA----WEE-----GGILYLQTELCGPSLQQHC-EAWGASLPEAQVWGYLRDTL 167

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL-RLGTPNY 218
             ++ LHS GL+ L++KP+N+ L    +  LGDFG     L   L  +     + G P Y
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFG-----LLVELGTAGAGEVQEGDPRY 222

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKKEKPCIP 277
           MAPE  +    G      D +  G +I+E+   ++    G+  +++          P   
Sbjct: 223 MAPELLQ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ----GYLPPEFT 274

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           +GL   + +V++   E D + R     +L    
Sbjct: 275 AGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  134 bits (339), Expect = 1e-35
 Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 35/287 (12%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
           ID   L L+  IG G FG V+ A             E+AVK      ++     +     
Sbjct: 4   IDFAELTLEEIIGIGGFGKVYRAFWIGD--------EVAVKAARHDPDEDISQTIENVRQ 55

Query: 99  --ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
             +LF   +   ++  L G+ +    +C+ M+F   G +   +    G ++P   ++ + 
Sbjct: 56  EAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWA 111

Query: 156 IQLAKGISDLHSIGLLVL---NLKPSNLLLSEHDQLV--------LGDFGIPYLLLGRSL 204
           +Q+A+G++ LH   ++ +   +LK SN+L+ +  +          + DFG     L R  
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG-----LAREW 166

Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
             +      G   +MAPE          S  +D W +G  + E+LTG  P+ G     + 
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRAS---MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223

Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           + V + K    IPS  P     ++  C+  D  +RP   +IL    +
Sbjct: 224 YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  135 bits (343), Expect = 2e-35
 Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 36/274 (13%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM--LLPLKEDCAKVFVNKFEEL--- 100
               +IG G FG   L    +         +  +K   +  +     +    +   L   
Sbjct: 27  VRLQKIGEGSFGKAILVKSTEDG------RQYVIKEINISRMSSKEREESRREVAVLANM 80

Query: 101 -FP---KFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
             P   ++RES    +       NG + I M + E G +  RI  Q+G       IL + 
Sbjct: 81  KHPNIVQYRES----FEE-----NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR--L 213
           +Q+   +  +H   +L  ++K  N+ L++   + LGDFGI      R L+ +    R  +
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI-----ARVLNSTVELARACI 186

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           GTP Y++PE  E +   P + ++D W  GC + E+ T    +   S++ +   ++     
Sbjct: 187 GTPYYLSPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP 243

Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
           P +       + +++   F+ + R+RP +  IL 
Sbjct: 244 P-VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  131 bits (332), Expect = 2e-34
 Identities = 63/295 (21%), Positives = 116/295 (39%), Gaps = 33/295 (11%)

Query: 33  PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV 92
           P    P +    ++ + +IG+G FG V      +          +A+K L+    +    
Sbjct: 9   PKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK------SVVAIKSLILGDSEGETE 62

Query: 93  FVNKFEE------LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGK 145
            + KF+E      +        ++  L+G+        + M+F   G +  R+   +   
Sbjct: 63  MIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRL-LDKAHP 118

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVL--NLKPSNLLLSEHDQLV-----LGDFGIPYL 198
           +     LR  + +A GI  + +    ++  +L+  N+ L   D+       + DFG    
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---- 174

Query: 199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
            L +    S   L  G   +MAPE    E     + + DT+ F   +  +LTG  P+   
Sbjct: 175 -LSQQSVHSVSGLL-GNFQWMAPETIGAE-EESYTEKADTYSFAMILYTILTGEGPFDEY 231

Query: 259 SVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           S  +I   + +  +  +P IP   PP + NVI  C+  D + RP  + I+     
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  129 bits (326), Expect = 9e-34
 Identities = 60/281 (21%), Positives = 105/281 (37%), Gaps = 41/281 (14%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM--LLPLKEDCAKVFVNKFEEL--- 100
           ++ + IG G +G                   L  K      + E   ++ V++   L   
Sbjct: 9   EVLYTIGTGSYGRCQKIRRKSDG------KILVWKELDYGSMTEAEKQMLVSEVNLLREL 62

Query: 101 -FP---KFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP--DILR 153
             P   ++ +      +      N  + I M++ E G +   I +    +  L    +LR
Sbjct: 63  KHPNIVRYYDR----IIDRT---NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115

Query: 154 YGIQLAKGISDLHSIGLLVLN-----LKPSNLLLSEHDQLVLGDFGIPYLLLGRSL-SDS 207
              QL   + + H             LKP+N+ L     + LGDFG+      R L  D+
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL-----ARILNHDT 170

Query: 208 DMAL-RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS 266
             A   +GTP YM+PEQ         + ++D W  GC + E+   + P+   S +E+   
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227

Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
           +   K +  IP      +  +I         +RP + +IL 
Sbjct: 228 IREGKFRR-IPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  129 bits (327), Expect = 1e-33
 Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 30/279 (10%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ID   ++++  +GRG FG V  A             ++A+K +    E   K F+ +   
Sbjct: 5   IDYKEIEVEEVVGRGAFGVVCKAKWRAK--------DVAIKQIES--ESERKAFIVELR- 53

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG-GKLPLPDILRYGIQ 157
              +     ++  L+G  +    +C+ M++ E GS+ + +              + + +Q
Sbjct: 54  QLSRVN-HPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110

Query: 158 LAKGISDLHSIGLLVL---NLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALRL 213
            ++G++ LHS+    L   +LKP NLLL     ++ + DFG         +       + 
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNK- 164

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI-YHSVVIKKE 272
           G+  +MAPE +E       S + D + +G  + E++T  +P+             V    
Sbjct: 165 GSAAWMAPEVFEGS---NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 221

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           +P +   LP  +E+++  C+  D   RP M +I+     
Sbjct: 222 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  127 bits (321), Expect = 2e-32
 Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 35/282 (12%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFP 102
            +  +IG G    V+   + +           A+K +    E+     ++ +        
Sbjct: 12  SILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVN--LEEADNQTLDSYRNEIAYLN 62

Query: 103 KFR-ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           K +  S  +  L+   + +  I + M+     +   +  ++   +   +   Y   + + 
Sbjct: 63  KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEA 120

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPN 217
           +  +H  G++  +LKP+N L+ +   L L DFGI        +     ++      GT N
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGI-----ANQMQPDTTSVVKDSQVGTVN 174

Query: 218 YMAPE--------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVV 268
           YM PE        +   + +  IS ++D W  GC +  M  G  P+     +    H+++
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
               +   P      +++V+  C + D + R  + ++L H +
Sbjct: 235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  124 bits (313), Expect = 1e-31
 Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 35/282 (12%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFP 102
            +  +IG G    V+   + +           A+K +    E+     ++ +        
Sbjct: 31  SILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVN--LEEADNQTLDSYRNEIAYLN 81

Query: 103 KFR-ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           K +  S  +  L+   + +  I + M+     +   +  ++   +   +   Y   + + 
Sbjct: 82  KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEA 139

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPN 217
           +  +H  G++  +LKP+N L+ +   L L DFGI        +     ++      GT N
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGI-----ANQMQPDTTSVVKDSQVGTVN 193

Query: 218 YMAPE--------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVV 268
           YM PE        +   + +  IS ++D W  GC +  M  G  P+     +    H+++
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
               +   P      +++V+  C + D + R  + ++L H +
Sbjct: 254 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  124 bits (314), Expect = 3e-31
 Identities = 49/282 (17%), Positives = 109/282 (38%), Gaps = 35/282 (12%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFP 102
            +  +IG G    V+   +       ++    A+K +    E+     ++ +        
Sbjct: 59  SILKQIGSGGSSKVFQVLN-------EKKQIYAIKYVN--LEEADNQTLDSYRNEIAYLN 109

Query: 103 KFR-ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
           K +  S  +  L+   + +  I + M+     +   +  ++   +   +   Y   + + 
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEA 167

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPN 217
           +  +H  G++  +LKP+N L+ +   L L DFGI        +     ++      G  N
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGI-----ANQMQPDTTSVVKDSQVGAVN 221

Query: 218 YMAPE--------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVV 268
           YM PE        +   + +  IS ++D W  GC +  M  G  P+     +    H+++
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
               +   P      +++V+  C + D + R  + ++L H +
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  123 bits (310), Expect = 3e-31
 Identities = 60/303 (19%), Positives = 112/303 (36%), Gaps = 44/303 (14%)

Query: 39  WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVF---- 93
            ID        ++G G F  V L             H  A+K +L   ++D  +      
Sbjct: 25  IIDNKHYLFIQKLGEGGFSYVDLVEGLHDG------HFYALKRILCHEQQDREEAQREAD 78

Query: 94  ---------VNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRI--AQQ 141
                    + +      + R +              +  + + F++ G++ + I   + 
Sbjct: 79  MHRLFNHPNILRLVAYCLRERGA------------KHEAWLLLPFFKRGTLWNEIERLKD 126

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI------ 195
           +G  L    IL   + + +G+  +H+ G    +LKP+N+LL +  Q VL D G       
Sbjct: 127 KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186

Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
                 ++L+  D A +  T +Y APE +  +    I   TD W  GC +  M+ G  P 
Sbjct: 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP- 245

Query: 256 FGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ 313
           +    ++     +  + +  IP       A+  ++      D   RP +  +L   E+ Q
Sbjct: 246 YDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305

Query: 314 NAV 316
              
Sbjct: 306 PPA 308

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  122 bits (307), Expect = 6e-31
 Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 48/282 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +++ +IGRG F +V+ A              +A+K             V  F+ +  K R
Sbjct: 35  RIEKKIGRGQFSEVYRAACLLDG------VPVALK------------KVQIFDLMDAKAR 76

Query: 106 ES--QSVCWL-----------HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP-- 149
               + +  L           +   + + ++ I ++  + G +   I   +  K  +P  
Sbjct: 77  ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
            + +Y +QL   +  +HS  ++  ++KP+N+ ++    + LGD G+     GR  S    
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-----GRFFSSKTT 191

Query: 210 ALR--LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK--SVEEIYH 265
           A    +GTP YM+PE+         +F++D W  GC + EM     P++G   ++  +  
Sbjct: 192 AAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248

Query: 266 SVVIKKEKPCIPSG-LPPAVENVIIGCFEYDLRNRPLMADIL 306
            +  + + P +PS      +  ++  C   D   RP +  + 
Sbjct: 249 KIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  122 bits (306), Expect = 4e-30
 Identities = 38/309 (12%), Positives = 83/309 (26%), Gaps = 51/309 (16%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELF--- 101
           L     +G+        AT  ++ + F       V +    +   +       EE+    
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESF------EVHVPYFTERPPSNAIKQMKEEVLRLR 133

Query: 102 --------------PKFRESQSVCWLHGISVIN-----------GKICIAMKFYEGSVGD 136
                          +F     +        +                      + ++  
Sbjct: 134 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 193

Query: 137 RIAQ-----QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG 191
                         L     L+  +Q+ + ++ LH  GL+   L+P +++L +   + L 
Sbjct: 194 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT 253

Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ--WEPEVRGPISFETDTWGFGCSIMEML 249
            F         ++S          P   A     +       ++F  DTW  G +I  + 
Sbjct: 254 GFEHLVRDGASAVSPIGRG--FAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311

Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL--H 307
               P    +       +            +P  V  ++ G   Y   +R L    +   
Sbjct: 312 CADLPNTDDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP 365

Query: 308 AFESSQNAV 316
            +E  +  +
Sbjct: 366 EYEQLRTEL 374

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  119 bits (301), Expect = 5e-30
 Identities = 52/295 (17%), Positives = 109/295 (36%), Gaps = 45/295 (15%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
             P+ L     +G+G FG     TH ++ +       + +K L+   E+  + F+     
Sbjct: 7   FRPSDLIHGEVLGKGCFGQAIKVTHRETGEV------MVMKELIRFDEETQRTFL----- 55

Query: 100 LFPKFRESQ--------SVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
                +E +        +V    G+   + ++    ++ + G++   I +    + P   
Sbjct: 56  -----KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQ 109

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI-----------PYLL 199
            + +   +A G++ LHS+ ++  +L   N L+ E+  +V+ DFG+             L 
Sbjct: 110 RVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169

Query: 200 LGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFG 257
             +          +G P +MA     PE+        + D + FG  + E++  +     
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMA-----PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224

Query: 258 -KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
                  +   V        P   PP+   + + C + D   RP    + H  E+
Sbjct: 225 YLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  117 bits (295), Expect = 2e-29
 Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 36/280 (12%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEEL-------F 101
            +GRG FG V+ A +     ++      A+K + LP +E   +  + + + L        
Sbjct: 12  CLGRGGFGVVFEAKNKVDDCNY------AIKRIRLPNRELAREKVMREVKALAKLEHPGI 65

Query: 102 PKFRES---QSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLP-LPDILRYGI 156
            ++  +   ++       S     + I M+     ++ D +  +   +       L   +
Sbjct: 66  VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL---------LGRSLSDS 207
           Q+A+ +  LHS GL+  +LKPSN+  +  D + +GDFG+   +         L    + +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185

Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               ++GT  YM+PEQ         S + D +  G  + E+L    P F   +E +    
Sbjct: 186 RHTGQVGTKLYMSPEQIH---GNSYSHKVDIFSLGLILFELLY---P-FSTQMERVRTLT 238

Query: 268 VIKKEK-PCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            ++  K P + +   P    ++          RP   +I+
Sbjct: 239 DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII 278

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  116 bits (294), Expect = 4e-29
 Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 59/295 (20%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHEL----AVKMLLP-LKEDCAKVFVNKFEEL 100
           +L+  +GRG  GDV+ A                   A+K++   L  D   VF  + +  
Sbjct: 37  RLRRLVGRGGMGDVYEAEDTV----------RERIVALKLMSETLSSD--PVFRTRMQ-- 82

Query: 101 FPKFRESQSVCWL--------HGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDI 151
               RE+++   L        H    I+G++ + M+   G  +   +  +R G L  P  
Sbjct: 83  ----REARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAML--RRQGPLAPPRA 136

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM-- 209
           +    Q+   +   H+ G    ++KP N+L+S  D   L DFGI       + +D  +  
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGI-----ASATTDEKLTQ 191

Query: 210 -ALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               +GT  YMAPE+          ++  D +   C + E LTG  P+ G  +  +   +
Sbjct: 192 LGNTVGTLYYMAPER----FSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI 247

Query: 268 VIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQ 313
               +    PS    G+P A + VI      +  +R      L A    A  ++ 
Sbjct: 248 ---NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  113 bits (286), Expect = 3e-28
 Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 35/285 (12%)

Query: 40  IDPTS--LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK--MLLPLKEDCAKVFVN 95
           +      LK    IGRG F  V+         D +   E+A        L +   + F  
Sbjct: 21  MSNDGRFLKFDIEIGRGSFKTVYKGL------DTETTVEVAWCELQDRKLTKSERQRFKE 74

Query: 96  KFEELFPKFRESQSV-----CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           + E L  K  +  ++      W   +      I +  +    G++   +  +R   + + 
Sbjct: 75  EAEML--KGLQHPNIVRFYDSWESTVKG-KKCIVLVTELMTSGTLKTYL--KRFKVMKIK 129

Query: 150 DILRYGIQLAKGISDLHSIGLLVL--NLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSD 206
            +  +  Q+ KG+  LH+    ++  +LK  N+ ++     V +GD G     L      
Sbjct: 130 VLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG-----LATLKRA 184

Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYH 265
           S     +GTP +MAPE +E +         D + FG  ++EM T   P+   ++  +IY 
Sbjct: 185 SFAKAVIGTPEFMAPEMYEEKY----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR 240

Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            V    +         P V+ +I GC   +   R  + D+L HAF
Sbjct: 241 RVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  115 bits (289), Expect = 5e-28
 Identities = 38/306 (12%), Positives = 79/306 (25%), Gaps = 60/306 (19%)

Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE-- 99
           P +L     +G+        AT  ++           V +    +   +       EE  
Sbjct: 72  PRTLVRGTVLGQEDPYAYLEATDQETG------ESFEVHVPYFTERPPSNAIKQMKEEVL 125

Query: 100 ---LFPKFRESQSV-----------------------CWLHGISVINGKICIAMKFYEGS 133
              L    +  +                           L    +            + +
Sbjct: 126 RLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSN 185

Query: 134 VGDRI-----AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL 188
           +                L     L+  +Q+ + ++ LH  GL+   L+P +++L +   +
Sbjct: 186 LQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGV 245

Query: 189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--------RGPISFETDTWG 240
            L  F          + D    +   +  +  PE              R  ++F  D W 
Sbjct: 246 FLTGFEH-------LVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
            G  I  +     P    +       +            +P  V  ++ G   Y   +R 
Sbjct: 299 LGLVIYWIWCADLPITKDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRL 352

Query: 301 LMADIL 306
           L    +
Sbjct: 353 LPLQAM 358

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  113 bits (285), Expect = 8e-28
 Identities = 56/291 (19%), Positives = 105/291 (36%), Gaps = 35/291 (12%)

Query: 39  WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVF--VN 95
            +    L+++  +  G F  V+ A    S  ++      A+K +L   +E    +   V 
Sbjct: 24  ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREY------ALKRLLSNEEEKNRAIIQEVC 77

Query: 96  KFEELFP-----KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQR-GGKLPLP 149
             ++L       +F  + S+           +  +  +  +G + + + +    G L   
Sbjct: 78  FMKKLSGHPNIVQFCSAASIG-KEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCD 136

Query: 150 DILRYGIQLAKGISDLHSIGLLVLN--LKPSNLLLSEHDQLVLGDFGI---PYLLLGRSL 204
            +L+   Q  + +  +H     +++  LK  NLLLS    + L DFG           S 
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196

Query: 205 SDSDMAL------RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
           S    AL      R  TP Y  PE  +     PI  + D W  GC +  +     P+   
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256

Query: 259 SVEEIYHSVVIKKEKPCIPSGLP--PAVENVIIGCFEYDLRNRPLMADILH 307
           +   I +       K  IP          ++I    + +   R  +A+++H
Sbjct: 257 AKLRIVNG------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVH 301

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  111 bits (280), Expect = 2e-27
 Identities = 50/292 (17%), Positives = 100/292 (34%), Gaps = 42/292 (14%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE------- 98
           +    +G+G FG V  A +   +         A+K +    E+     +++         
Sbjct: 9   EEIAVLGQGAFGQVVKARNALDS------RYYAIKKI-RHTEEKLSTILSEVMLLASLNH 61

Query: 99  ----ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
                 +  + E ++             + I M++ E G++ D I           +  R
Sbjct: 62  QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI-HSENLNQQRDEYWR 120

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI-----------PYLLLGR 202
              Q+ + +S +HS G++  +LKP N+ + E   + +GDFG+                  
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
             S  ++   +GT  Y+A E  +    G  + + D +  G    EM+       G     
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDG--TGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVN 236

Query: 263 IYHSVVIKKEKPCIPSGLPPAV----ENVIIGCFEYDLRNRPLMADIL-HAF 309
           I     ++      P           + +I    ++D   RP    +L   +
Sbjct: 237 ILK--KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW 286

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  112 bits (281), Expect = 2e-27
 Identities = 76/320 (23%), Positives = 110/320 (34%), Gaps = 42/320 (13%)

Query: 20  EGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
           E +   L T    P       +   +  + R+GRG FG+V      Q+        + AV
Sbjct: 35  EDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTG------FQCAV 88

Query: 80  KMLLPLKEDCAKVFVNKFEELFPKFRE--------SQSVCWLHGISVINGKICIAMKFYE 131
           K          KV +  F        E        S  +  L+G       + I M+  E
Sbjct: 89  K----------KVRLEVFRV-----EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133

Query: 132 -GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV- 189
            GS+G  I  ++ G LP    L Y  Q  +G+  LH+  +L  ++K  N+LLS       
Sbjct: 134 GGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA 191

Query: 190 LGDFGIPYLLLGRSLSDSDMALR--LGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIM 246
           L DFG    L    L  S +      GT  +MAPE     V G P   + D W   C ++
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV----VMGKPCDAKVDIWSSCCMML 247

Query: 247 EMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
            ML G  PW                     IP    P     I      +  +R    ++
Sbjct: 248 HMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307

Query: 306 L-HAFESSQNAVYNDGEWTG 324
                ++ Q        W G
Sbjct: 308 RRKVGKALQEVGGLKSPWKG 327

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  110 bits (278), Expect = 3e-27
 Identities = 45/285 (15%), Positives = 88/285 (30%), Gaps = 45/285 (15%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFRESQ 108
           +IG G FG V+                 A+K    PL     +    +         +  
Sbjct: 18  KIGSGEFGSVFKCVKRLDG------CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71

Query: 109 SVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP--DILRYGIQLAKGISDL 165
            V         +  + I  ++   GS+ D I++           ++    +Q+ +G+  +
Sbjct: 72  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLV-------------------LGDFGIPYLLLGRSLSD 206
           HS+ L+ +++KPSN+ +S                         +GD G            
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH-------VTRI 184

Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYH 265
           S   +  G   ++A E  +         + D +    +++           G    EI  
Sbjct: 185 SSPQVEEGDSRFLANEVLQENY--THLPKADIFALALTVVCAAGAEPLPRNGDQWHEI-- 240

Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
               +   P IP  L      ++      D   RP    ++ H+ 
Sbjct: 241 ---RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  112 bits (281), Expect = 4e-27
 Identities = 45/304 (14%), Positives = 80/304 (26%), Gaps = 52/304 (17%)

Query: 42  PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELF 101
              LKL   +  G    V+L    +  +DF      A+K+     E+         E  F
Sbjct: 61  ERKLKLVEPLRVGDRSVVFLVRDVERLEDF------ALKVFTMGAENSRSELERLHEATF 114

Query: 102 ----------------PKFRESQSVCWLHGISVIN-----------GKICIAMKFYEGSV 134
                            +         +                      + M      +
Sbjct: 115 AAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDL 174

Query: 135 GDRIAQ-----QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV 189
               +         G   +  +     QL +  ++L S GL+  +  P NL +    +L+
Sbjct: 175 ELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLM 234

Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
           LGD                       P   AP ++        +   + W  G SI  + 
Sbjct: 235 LGDVSA-------LWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287

Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIP-------SGLPPAVENVIIGCFEYDLRNRPLM 302
               P+   +              P          + LP  V+ +I     +D R R L 
Sbjct: 288 CLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP 347

Query: 303 ADIL 306
            + +
Sbjct: 348 LEAM 351

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  109 bits (275), Expect = 9e-27
 Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 53/293 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP-LKEDCAKVFVNKFEELFPKF 104
           K+  ++G G    V+LA       D     ++A+K +    +E   +  + +FE      
Sbjct: 14  KIVDKLGGGGMSTVYLAE------DTILNIKVAIKAIFIPPREK--EETLKRFE------ 59

Query: 105 RESQSVCWL--HGISVI------NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYG 155
           RE  +   L    I  +      +    + M++ EG ++ + I     G L +   + + 
Sbjct: 60  REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFT 117

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM---ALR 212
            Q+  GI   H + ++  ++KP N+L+  +  L + DFGI      ++LS++ +      
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI-----AKALSETSLTQTNHV 172

Query: 213 LGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVI 269
           LGT  Y +PEQ     +G      TD +  G  + EML G  P+ G++   I   H   I
Sbjct: 173 LGTVQYFSPEQ----AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH---I 225

Query: 270 KKEKPCIPS----GLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQ 313
           +   P + +     +P ++ NVI+   E D  NR      +  D+      ++
Sbjct: 226 QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  108 bits (271), Expect = 3e-26
 Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 21/266 (7%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           +G+G +G V+      +         +A+K +       ++    +      K  + +++
Sbjct: 30  LGKGTYGIVYAGRDLSNQV------RIAIKEIPERDSRYSQPLHEEIALH--KHLKHKNI 81

Query: 111 CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--ILRYGIQLAKGISDLHS 167
               G    NG I I M+    GS+   + + + G L   +  I  Y  Q+ +G+  LH 
Sbjct: 82  VQYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140

Query: 168 IGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
             ++  ++K  N+L++ +  ++ + DFG    L G +          GT  YMAPE  + 
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDK 197

Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHSVVIKKEKPCIPSGLPPAV 284
             RG      D W  GC+I+EM TG  P+   G+    ++  V + K  P IP  +    
Sbjct: 198 GPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGMFKVHPEIPESMSAEA 255

Query: 285 ENVIIGCFEYDLRNRPLMADIL-HAF 309
           +  I+ CFE D   R    D+L   F
Sbjct: 256 KAFILKCFEPDPDKRACANDLLVDEF 281

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  108 bits (272), Expect = 6e-26
 Identities = 40/278 (14%), Positives = 90/278 (32%), Gaps = 26/278 (9%)

Query: 13  SFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFD 72
           S     +    +    + A   +T   +    + + H +G G F  V+ AT     D  +
Sbjct: 35  SKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKN 94

Query: 73  EYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE- 131
           +  +  +K+  P       +     E L P  +        +   +      +  + Y  
Sbjct: 95  K-QKFVLKVQKPANPWEFYIGTQLMERLKPSMQHM--FMKFYSAHLFQNGSVLVGELYSY 151

Query: 132 GSVGDRIAQQR---GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ- 187
           G++ + I   +      +P   ++ + +++   I  +H   ++  ++KP N +L      
Sbjct: 152 GTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE 211

Query: 188 ----------LVLGDFGIPYLLLGRSLSDSDMAL--RLGTPNYMAPEQWEPEVRGPISFE 235
                     L L D G     +   L         +  T  +   E    +   P +++
Sbjct: 212 QDDEDDLSAGLALIDLG---QSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK---PWNYQ 265

Query: 236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
            D +G   ++  ML G          E     + ++  
Sbjct: 266 IDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLP 303

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  107 bits (269), Expect = 2e-25
 Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 30/302 (9%)

Query: 20  EGDPDHLRTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELA 78
           +        V+        W ++   L L  +IGRG FG+V+            +   +A
Sbjct: 90  QPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLR------ADNTLVA 143

Query: 79  VKMLLPLKEDCAKVFVNKF-EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSV 134
           VK     +E        KF +E  +  ++    ++  L G+      I I M+  + G  
Sbjct: 144 VKS---CRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDF 199

Query: 135 GDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG 194
              + +  G +L +  +L+     A G+  L S   +  +L   N L++E + L + DFG
Sbjct: 200 LTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG 258

Query: 195 IPYLLLGRSLSDSDMALRLGTPNY----MAPEQWEPEVRGPISFETDTWGFGCSIMEMLT 250
                + R  +D   A   G         APE       G  S E+D W FG  + E  +
Sbjct: 259 -----MSREEADGVYAASGGLRQVPVKWTAPEAL---NYGRYSSESDVWSFGILLWETFS 310

Query: 251 -GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            G  P+   S ++    V      PC P   P AV  ++  C+ Y+   RP  + I    
Sbjct: 311 LGASPYPNLSNQQTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369

Query: 310 ES 311
           +S
Sbjct: 370 QS 371

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  109 bits (273), Expect = 5e-25
 Identities = 55/276 (19%), Positives = 103/276 (37%), Gaps = 50/276 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           ++K  I  G  G ++LA              + +K L+   +                  
Sbjct: 83  EVKGCIAHGGLGWIYLALDRNVNGR-----PVVLKGLVHSGDA---EAQAMAM------A 128

Query: 106 ESQSVCWL-------------HGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDIL 152
           E Q +  +             H     +    I M++  G     + + +G KLP+ + +
Sbjct: 129 ERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQS---LKRSKGQKLPVAEAI 185

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
            Y +++   +S LHSIGL+  +LKP N++L+E +QL L D G         ++       
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLGA-----VSRINSFGYL-- 237

Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
            GTP + APE     VR   +  TD +  G ++  +   +    G+ V+ +         
Sbjct: 238 YGTPGFQAPEI----VRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------P 285

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHA 308
           +         +   ++    + D R R   A+ + A
Sbjct: 286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSA 321

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  104 bits (261), Expect = 1e-24
 Identities = 55/311 (17%), Positives = 110/311 (35%), Gaps = 51/311 (16%)

Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
                 ++ L+  IG+G FG+VW               E+AVK+    +E     +  + 
Sbjct: 37  QRTIARTIVLQESIGKGRFGEVWRGKWRGE--------EVAVKIFSSREERS---WFREA 85

Query: 98  EELFPKFRESQSVCWLHGISVING----KICIAMKFYE-GSVGDRIAQQRGGKLPLPDIL 152
           E         +++         +     ++ +   ++E GS+ D + +     + +  ++
Sbjct: 86  EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMI 142

Query: 153 RYGIQLAKGISDLHSIGLLVL--------NLKPSNLLLSEHDQLVLGDFGIPYLLL-GRS 203
           +  +  A G++ LH   +           +LK  N+L+ ++    + D G+         
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202

Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPI--SFE-TDTWGFGCSIMEMLTGIQ------- 253
             D     R+GT  YMAPE  +  +      SF+  D +  G    E+            
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262

Query: 254 ---PWFGK-----SVEEIYHSVVIKKEKPCIPSGL-----PPAVENVIIGCFEYDLRNRP 300
              P++       SVEE+   V  +K +P IP+          +  ++  C+  +   R 
Sbjct: 263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 322

Query: 301 LMADILHAFES 311
               I      
Sbjct: 323 TALRIKKTLSQ 333

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  104 bits (260), Expect = 2e-24
 Identities = 55/325 (16%), Positives = 109/325 (33%), Gaps = 70/325 (21%)

Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
                  +++  +IG+G +G+VW+              ++AVK           VF    
Sbjct: 32  QRTIAKQIQMVKQIGKGRYGEVWMGKWRGE--------KVAVK-----------VFFTTE 72

Query: 98  EELFPKFRESQSVCWLH------------GISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
           E  + +  E      +               +    ++ +   ++E GS+ D +      
Sbjct: 73  EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--- 129

Query: 145 KLPLPDILRYGIQLAKGISDLHSIGLLVLN--------LKPSNLLLSEHDQLVLGDFGIP 196
            L    +L+       G+  LH+               LK  N+L+ ++    + D G+ 
Sbjct: 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189

Query: 197 YLLL-GRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFE-TDTWGFGCSIMEMLTGI 252
              +   +  D     R+GT  YM PE  +  +      S+   D + FG  + E+    
Sbjct: 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRC 249

Query: 253 ----------QPWFGK-----SVEEIYHSVVIKKEKPCIPSGL-----PPAVENVIIGCF 292
                      P+        S E++   V IKK +P  P+          +  ++  C+
Sbjct: 250 VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECW 309

Query: 293 EYDLRNRPLMADI---LHAFESSQN 314
            ++  +R     +   L     SQ+
Sbjct: 310 AHNPASRLTALRVKKTLAKMSESQD 334

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  102 bits (255), Expect = 4e-24
 Identities = 56/305 (18%), Positives = 113/305 (37%), Gaps = 53/305 (17%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE-ELFPK 103
           + L   +G+G +G+VW  +             +AVK+     E     +  + E      
Sbjct: 10  ITLLECVGKGRYGEVWRGSWQGE--------NVAVKIFSSRDEKS---WFRETELYNTVM 58

Query: 104 FRESQSVCWLHGISVING----KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
            R  +++       + +     ++ +   ++E GS+ D +       L     LR  + +
Sbjct: 59  LR-HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSI 114

Query: 159 AKGISDLHSIGLLVLN--------LKPSNLLLSEHDQLVLGDFGIPYLL-LGRSLSDSDM 209
           A G++ LH                LK  N+L+ ++ Q  + D G+  +     +  D   
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174

Query: 210 ALRLGTPNYMAPEQWE--PEVRGPISFE-TDTWGFGCSIMEMLTGI----------QPWF 256
             R+GT  YMAPE  +   +V    S++  D W FG  + E+   +           P++
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234

Query: 257 GK-----SVEEIYHSVVIKKEKPCIPSGL-----PPAVENVIIGCFEYDLRNRPLMADIL 306
                  S E++   V + +++P IP+         ++  ++  C+  +   R     I 
Sbjct: 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294

Query: 307 HAFES 311
                
Sbjct: 295 KTLTK 299

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  102 bits (256), Expect = 4e-24
 Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 65/324 (20%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP-LKEDCAKVFVNKFEELFPKF 104
           +L   +G G   +V LA       D  ++ ++AVK+L   L  D    F  +F       
Sbjct: 15  ELGEILGFGGMSEVHLAR------DLRDHRDVAVKVLRADLARD--PSFYLRFR------ 60

Query: 105 RESQSVCWLH----------GISVINGKIC--IAMKFYEG-SVGDRIAQQRGGKLPLPDI 151
           RE+Q+   L+          G +         I M++ +G ++ D +     G +     
Sbjct: 61  REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRA 118

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
           +       + ++  H  G++  ++KP+N+++S  + + + DFGI      R+++DS  ++
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI-----ARAIADSGNSV 173

Query: 212 R-----LGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIY 264
                 +GT  Y++PEQ     RG  +   +D +  GC + E+LTG  P+ G S V    
Sbjct: 174 TQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV---- 225

Query: 265 HSVVIK--KEKPCIPS----GLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQ 313
            SV  +  +E P  PS    GL   ++ V++     +  NR      + AD++       
Sbjct: 226 -SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

Query: 314 N---AVYNDGEWTGLGSRALTDTS 334
                V  D E T L S A  + S
Sbjct: 285 PEAPKVLTDAERTSLLSSAAGNLS 308

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  100 bits (251), Expect = 2e-23
 Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 17/259 (6%)

Query: 60  WLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI 119
           WL T  +   +  +   L  +         + +     +        +++       S  
Sbjct: 73  WLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP 132

Query: 120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD-ILRYGIQLAKGISDLHSIGLLVLNLKP 177
              + I M+     ++ D + ++   +       L   IQ+A+ +  LHS GL+  +LKP
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKP 192

Query: 178 SNLLLSEHDQLVLGDFGI---------PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
           SN+  +  D + +GDFG+            +L    + +    ++GT  YM+PEQ     
Sbjct: 193 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH--- 249

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVI 288
               S + D +  G  + E+L        +    I   V    + P + +   P    ++
Sbjct: 250 GNNYSHKVDIFSLGLILFELLYSFSTQMERV--RIITDVR-NLKFPLLFTQKYPQEHMMV 306

Query: 289 IGCFEYDLRNRPLMADILH 307
                     RP   DI+ 
Sbjct: 307 QDMLSPSPTERPEATDIIE 325

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  102 bits (255), Expect = 2e-23
 Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 20/272 (7%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
             K  +G G  G +       +        ++AVK +LP     A     +  +L  +  
Sbjct: 27  CPKDVLGHGAEGTIVYRGMFDN-------RDVAVKRILPECFSFAD----REVQLLRESD 75

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           E  +V              IA++    ++ + + +Q+       + +    Q   G++ L
Sbjct: 76  EHPNVIRYFCTEKDRQFQYIAIELCAATLQEYV-EQKDFAHLGLEPITLLQQTTSGLAHL 134

Query: 166 HSIGLLVLNLKPSNLLLSEHDQ-----LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           HS+ ++  +LKP N+L+S  +       ++ DFG+   L     S S  +   GT  ++A
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK--EKPCIPS 278
           PE    + +   ++  D +  GC    +++     FGKS++   + ++     +      
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK 254

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                   +I      D + RP    +L H F
Sbjct: 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  101 bits (252), Expect = 2e-22
 Identities = 53/255 (20%), Positives = 92/255 (36%), Gaps = 49/255 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           ++K R+G G FG V    H  +        ++A+K        C +    K  E +    
Sbjct: 17  EMKERLGTGGFGYVLRWIHQDTG------EQVAIKQ-------CRQELSPKNRERW--CL 61

Query: 106 ESQSVCWLHGIS-----------------VINGKICIAMKFYE-GSVGDRIAQ-QRGGKL 146
           E Q    +  ++                   N    +AM++ E G +   + Q +    L
Sbjct: 62  EIQ---IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGL 118

Query: 147 PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV---LGDFGIPYLLLGRS 203
               I      ++  +  LH   ++  +LKP N++L    Q +   + D G       + 
Sbjct: 119 KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG-----YAKE 173

Query: 204 LSDSDMAL-RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
           L   ++    +GT  Y+APE  E +         D W FG    E +TG +P+       
Sbjct: 174 LDQGELCTEFVGTLQYLAPELLEQKKYTV---TVDYWSFGTLAFECITGFRPFLPNWQPV 230

Query: 263 IYHSVVIKKEKPCIP 277
            +H  V +K    I 
Sbjct: 231 QWHGKVREKSNEHIV 245

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 97.1 bits (242), Expect = 3e-22
 Identities = 56/310 (18%), Positives = 109/310 (35%), Gaps = 53/310 (17%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
                L+L     RG FG VW A              +AVK+     +     + N++E 
Sbjct: 21  FQSMPLQLLEVKARGRFGCVWKAQLLNE--------YVAVKIFPIQDKQS---WQNEYEV 69

Query: 99  ELFPKFRESQSVCWL---HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRY 154
              P  +    + ++      + ++  + +   F+E GS+ D +   +   +   ++   
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHI 126

Query: 155 GIQLAKGISDLHSIGLLVLN----------LKPSNLLLSEHDQLVLGDFGIPYLLLGRSL 204
              +A+G++ LH     + +          +K  N+LL  +    + DFG+  L      
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGK 185

Query: 205 SDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---- 258
           S  D   ++GT  YMAPE  +     +       D +  G  + E+ +      G     
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245

Query: 259 ------------SVEEIYHSVVIKKEKPCIPSGLPP-----AVENVIIGCFEYDLRNRPL 301
                       S+E++   VV KK++P +            +   I  C+++D   R  
Sbjct: 246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305

Query: 302 MADILHAFES 311
              +      
Sbjct: 306 AGCVGERITQ 315

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 95.0 bits (237), Expect = 7e-22
 Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 39/271 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS- 109
           +G+G FG+V+LA   QS         LA+K+L       A++     E    +  E QS 
Sbjct: 17  LGKGKFGNVYLAREKQSK------FILALKVL-----FKAQLEKAGVEHQLRREVEIQSH 65

Query: 110 -----VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                +  L+G      ++ + +++   G+V   +  Q+  K        Y  +LA  +S
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 123

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPNYM 219
             HS  ++  ++KP NLLL    +L + DFG          S    + R     GT +Y+
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRTDLCGTLDYL 174

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
            PE  E  +      + D W  G    E L G  P+   + +E Y    I + +   P  
Sbjct: 175 PPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDF 229

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           +     ++I    +++   RP++ ++L H +
Sbjct: 230 VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 95.7 bits (238), Expect = 1e-21
 Identities = 54/328 (16%), Positives = 101/328 (30%), Gaps = 78/328 (23%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           +D  +LKL   IGRG +G V+  +  +          +AV           KVF     +
Sbjct: 10  LDLDNLKLLELIGRGRYGAVYKGSLDER--------PVAV-----------KVFSFANRQ 50

Query: 100 LFPKFRESQSVCWLH-------------GISVINGKICIAMKFYE-GSVGDRIAQQRGGK 145
            F   +    V  +                +    +  + M++Y  GS+   ++      
Sbjct: 51  NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---T 107

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLN---------LKPSNLLLSEHDQLVLGDFGI- 195
                  R    + +G++ LH+      +         L   N+L+      V+ DFG+ 
Sbjct: 108 SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167

Query: 196 ----PYLLLGRSLSDSDMALRLGTPNYMAPE----QWEPEVRGPISFETDTWGFGCSIME 247
                  L+     D+     +GT  YMAPE                + D +  G    E
Sbjct: 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE 227

Query: 248 MLTGIQ-------------PWFGK-----SVEEIYHSVVIKKEKPCIP------SGLPPA 283
           +                   +  +     + E++   V  +K++P  P      S    +
Sbjct: 228 IFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS 287

Query: 284 VENVIIGCFEYDLRNRPLMADILHAFES 311
           ++  I  C++ D   R            
Sbjct: 288 LKETIEDCWDQDAEARLTAQXAEERMAE 315

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 64/273 (23%), Positives = 107/273 (39%), Gaps = 41/273 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-- 108
           +G+G F   +  +   +          A K++       + +      E      E    
Sbjct: 23  LGKGGFAKCFEISDADTK------EVFAGKIV-----PKSLLLKPHQREKM--SMEISIH 69

Query: 109 ------SVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
                  V   HG    N  + + ++     S+ +   ++    L  P+   Y  Q+  G
Sbjct: 70  RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLG 127

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPN 217
              LH   ++  +LK  NL L+E  ++ +GDFG    L  +   D +   R     GTPN
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGE---RKKVLCGTPN 180

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           Y+APE      +   SFE D W  GC +  +L G  P+    ++E Y    IKK +  IP
Sbjct: 181 YIAPEVLS---KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR--IKKNEYSIP 235

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
             + P   ++I    + D   RP + ++L   F
Sbjct: 236 KHINPVAASLIQKMLQTDPTARPTINELLNDEF 268

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 93.0 bits (232), Expect = 3e-21
 Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 40/286 (13%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W IDP+ L     IG G FG V L         +    ++A+K    ++E         F
Sbjct: 3   WVIDPSELTFVQEIGSGQFGLVHLGY-------WLNKDKVAIKT---IREGAMS--EEDF 50

Query: 98  -EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
            EE  +  K    + V  L+G+ +    IC+  +F E G + D + + + G      +L 
Sbjct: 51  IEEAEVMMKLSHPKLVQ-LYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLG 108

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
             + + +G++ L    ++  +L   N L+ E+  + + DFG     + R + D       
Sbjct: 109 MCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG-----MTRFVLDDQYTSST 163

Query: 214 GTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI 269
           GT     P +W  PEV      S ++D W FG  + E+ + G  P+  +S  E+   +  
Sbjct: 164 GT---KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-- 218

Query: 270 KKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
                      P      V  ++  C+     +RP  + +L     
Sbjct: 219 --STGFRLYK-PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 94.2 bits (235), Expect = 3e-21
 Identities = 62/305 (20%), Positives = 113/305 (37%), Gaps = 59/305 (19%)

Query: 33  PTQT-RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           P Q     +  T  K    +G G FG V+        +       +A+K    L+E  + 
Sbjct: 4   PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKE---LREATSP 58

Query: 92  VFVNKFEELFPKFRESQS--------VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR 142
               +         E+          VC L GI  +   + +  +    G + D + ++ 
Sbjct: 59  KANKEI------LDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYV-REH 110

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
              +    +L + +Q+AKG++ L    L+  +L   N+L+     + + DFG     L +
Sbjct: 111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-----LAK 165

Query: 203 SLSDSDMALRLGTPNYMA-----PEQW-EPEVRGPISF-----ETDTWGFGCSIMEMLT- 250
            L   +         Y A     P +W   E    I       ++D W +G ++ E++T 
Sbjct: 166 LLGAEEKE-------YHAEGGKVPIKWMALES---ILHRIYTHQSDVWSYGVTVWELMTF 215

Query: 251 GIQPWFGKSVEEIYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           G +P+ G    EI   +    EK    P  P      V  ++  C+  D  +RP   +++
Sbjct: 216 GSKPYDGIPASEISSIL----EKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 270

Query: 307 HAFES 311
             F  
Sbjct: 271 IEFSK 275

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 93.9 bits (234), Expect = 4e-21
 Identities = 68/304 (22%), Positives = 113/304 (37%), Gaps = 44/304 (14%)

Query: 23  PDHLRTVVATPTQTRPWIDPTSLK---LKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
           P                +DP S +       +G+G F   +  +   +          A 
Sbjct: 18  PGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTK------EVFAG 71

Query: 80  KMLLPLKEDCAKVFVNKFEELFPKFRESQ--------SVCWLHGISVINGKICIAMKFYE 131
           K++       + +      E      E           V   HG    N  + + ++   
Sbjct: 72  KIV-----PKSLLLKPHQREKM--SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124

Query: 132 -GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL 190
             S+ +   ++    L  P+   Y  Q+  G   LH   ++  +LK  NL L+E  ++ +
Sbjct: 125 RRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 182

Query: 191 GDFGIPYLLLGRSLSDSDMALRL----GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
           GDFG    L  +   D +   R     GTPNY+APE      +   SFE D W  GC + 
Sbjct: 183 GDFG----LATKVEYDGE---RKKVLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMY 232

Query: 247 EMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
            +L G  P+    ++E Y    IKK +  IP  + P   ++I    + D   RP + ++L
Sbjct: 233 TLLVGKPPFETSCLKETYLR--IKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290

Query: 307 -HAF 309
              F
Sbjct: 291 NDEF 294

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 92.6 bits (231), Expect = 4e-21
 Identities = 58/283 (20%), Positives = 104/283 (36%), Gaps = 34/283 (12%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
             +    + L   +G G FG V L         +   +++AVKM   +KE       ++F
Sbjct: 3   MELKREEITLLKELGSGQFGVVKLGK-------WKGQYDVAVKM---IKEGSMS--EDEF 50

Query: 98  -EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIA--QQRGGKLPLPDIL 152
            +E     K    + V   +G+      I I  ++     G  +   +  G  L    +L
Sbjct: 51  FQEAQTMMKLSHPKLVK-FYGVCSKEYPIYIVTEYISN--GCLLNYLRSHGKGLEPSQLL 107

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
                + +G++ L S   +  +L   N L+     + + DFG     + R + D      
Sbjct: 108 EMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG-----MTRYVLDDQYVSS 162

Query: 213 LGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV 268
           +GT     P +W  PEV      S ++D W FG  + E+ + G  P+   +  E+   V 
Sbjct: 163 VGT---KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS 219

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
                   P      +  ++  C+      RP    +L + E 
Sbjct: 220 QGHRLYR-PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 92.3 bits (230), Expect = 7e-21
 Identities = 56/270 (20%), Positives = 102/270 (37%), Gaps = 42/270 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS- 109
           +G+G FG+V+LA   Q+         +A+K+L       +++     E    +  E QS 
Sbjct: 22  LGKGKFGNVYLAREKQNK------FIMALKVL-----FKSQLEKEGVEHQLRREIEIQSH 70

Query: 110 -----VCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQLAKG 161
                +  ++       +I + ++F     G     +  Q+ G+        +  +LA  
Sbjct: 71  LRHPNILRMYNYFHDRKRIYLMLEFAPR--GELYKEL--QKHGRFDEQRSATFMEELADA 126

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----GTPN 217
           +   H   ++  ++KP NLL+    +L + DFG          S    +LR     GT +
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG---------WSVHAPSLRRRTMCGTLD 177

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           Y+ PE  E +       + D W  G    E L G+ P+   S  E +    I       P
Sbjct: 178 YLPPEMIEGKTHDE---KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--IVNVDLKFP 232

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILH 307
             L    +++I     Y    R  +  ++ 
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 96.1 bits (239), Expect = 8e-21
 Identities = 55/262 (20%), Positives = 97/262 (37%), Gaps = 35/262 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE-------LFPK 103
           IGRG FG+V+      +   +      A+K L     D  ++ + + E        +   
Sbjct: 197 IGRGGFGEVYGCRKADTGKMY------AMKCL-----DKKRIKMKQGETLALNERIMLSL 245

Query: 104 FRESQS--VCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAK 160
                   +  +        K+   +    G  GD      + G     D+  Y  ++  
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIIL 303

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G+  +H+  ++  +LKP+N+LL EH  + + D G     L    S       +GT  YMA
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG-----LACDFSKKKPHASVGTHGYMA 358

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG---KSVEEIYHSVVIKKEKPCIP 277
           PE  +  V        D +  GC + ++L G  P+     K   EI            +P
Sbjct: 359 PEVLQKGV--AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM--TLTMAVELP 414

Query: 278 SGLPPAVENVIIGCFEYDLRNR 299
               P + +++ G  + D+  R
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRR 436

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 91.5 bits (228), Expect = 1e-20
 Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 45/291 (15%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           + I    + L   +G G FG+V+   +    +   E   +AVK     K+DC      KF
Sbjct: 7   YGIAREDVVLNRILGEGFFGEVYEGVYT---NHKGEKINVAVKT---CKKDCTLDNKEKF 60

Query: 98  -EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
             E  +         V  L GI +      I M+ Y  G +G  + ++    L +  ++ 
Sbjct: 61  MSEAVIMKNLDHPHIVK-LIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVL 117

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           Y +Q+ K ++ L SI  +  ++   N+L++  + + LGDFG     L R + D D     
Sbjct: 118 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKAS 172

Query: 214 GT--P-NYMAPEQWEPEVRGPISF-----ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
            T  P  +M+PE         I+F      +D W F   + E+L+ G QP+F    +++ 
Sbjct: 173 VTRLPIKWMSPES--------INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224

Query: 265 HSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
             +    EK    P  P   PP +  ++  C++YD  +RP   +++ +   
Sbjct: 225 GVL----EKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 270

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 91.6 bits (228), Expect = 1e-20
 Identities = 53/301 (17%), Positives = 102/301 (33%), Gaps = 42/301 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYH-ELAVKMLLPLKEDCAKVFVNKFE 98
           I    L     +G+G F  ++     +  D    +  E+ +K+L     + ++ F   FE
Sbjct: 5   IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF---FE 61

Query: 99  E--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
              +  K      V   +G+ V   +  +  +F + GS+   + ++    + +   L   
Sbjct: 62  AASMMSKLSHKHLVL-NYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVA 119

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV--------LGDFGIPYLLLGRSLSDS 207
            QLA  +  L    L+  N+   N+LL   +           L D G     +  ++   
Sbjct: 120 KQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG-----ISITVLPK 174

Query: 208 DMALRLGTPNYMAPEQW-EPEV---RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEE 262
           D+              W  PE       ++  TD W FG ++ E+ + G +P      + 
Sbjct: 175 DI--------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR 226

Query: 263 IYHSVVIKK--EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG 320
                  +     P         + N+I  C +Y+  +RP    I+    S         
Sbjct: 227 KLQFYEDRHQLPAPK-----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281

Query: 321 E 321
            
Sbjct: 282 G 282

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 91.5 bits (228), Expect = 1e-20
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 36/297 (12%)

Query: 33  PTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           P Q+    I    L+L  ++G G FG V        +    +   +AVK L P      +
Sbjct: 7   PLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPS---GKTVSVAVKCLKPDVLSQPE 63

Query: 92  VFVNKFEE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPL 148
              +   E            +  L+G+ V+   + +  +    GS+ DR+ ++  G   L
Sbjct: 64  AMDDFIREVNAMHSLDHRNLIR-LYGV-VLTPPMKMVTELAPLGSLLDRL-RKHQGHFLL 120

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD 208
             + RY +Q+A+G+  L S   +  +L   NLLL+  D + +GDFG     L R+L  +D
Sbjct: 121 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG-----LMRALPQND 175

Query: 209 MALRLGTPN-----YMAPEQWEPEVRGPISFET-----DTWGFGCSIMEMLT-GIQPWFG 257
               +         + APE         +   T     DTW FG ++ EM T G +PW G
Sbjct: 176 DHYVMQEHRKVPFAWCAPES--------LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227

Query: 258 KSVEEIYHSVVIKKEK-PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ 313
            +  +I H +  + E+ P  P   P  + NV++ C+ +   +RP    +      +Q
Sbjct: 228 LNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 91.1 bits (227), Expect = 2e-20
 Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 37/295 (12%)

Query: 31  ATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
           A  + TR + I    ++L   IG G FGDV    +       +    +A+K     K   
Sbjct: 2   AMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYM---SPENPALAVAIKT---CKNCT 55

Query: 90  AKVFVNKF-EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGK 145
           +     KF +E     +F     V  L G+ +    + I M+    G +   + Q R   
Sbjct: 56  SDSVREKFLQEALTMRQFDHPHIVK-LIGV-ITENPVWIIMELCTLGELRSFL-QVRKYS 112

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L L  ++ Y  QL+  ++ L S   +  ++   N+L+S +D + LGDFG     L R + 
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYME 167

Query: 206 DSDMALRLGT--P-NYMAPEQWEPEVRGPISF-----ETDTWGFGCSIMEMLT-GIQPWF 256
           DS          P  +MAPE         I+F      +D W FG  + E+L  G++P+ 
Sbjct: 168 DSTYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219

Query: 257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           G    ++   +   +  P  P   PP + +++  C+ YD   RP   ++     +
Sbjct: 220 GVKNNDVIGRIENGERLPM-PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 92.0 bits (229), Expect = 2e-20
 Identities = 62/326 (19%), Positives = 112/326 (34%), Gaps = 51/326 (15%)

Query: 33  PTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
             +        T L+    +G G FG V         +       + +K+   +++   +
Sbjct: 2   AMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKV---IEDKSGR 56

Query: 92  VFVNKFEELFPKFRESQS--------VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR 142
                            +        +  L G+      + +  ++   GS+ D + +Q 
Sbjct: 57  QSFQAV------TDHMLAIGSLDHAHIVRLLGL-CPGSSLQLVTQYLPLGSLLDHV-RQH 108

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
            G L    +L +G+Q+AKG+  L   G++  NL   N+LL    Q+ + DFG     +  
Sbjct: 109 RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG-----VAD 163

Query: 203 SLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET-----DTWGFGCSIMEMLT-GIQPW 255
            L   D  L         P +W   E    I F       D W +G ++ E++T G +P+
Sbjct: 164 LLPPDDKQLL--YSEAKTPIKWMALES---IHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218

Query: 256 FGKSVEEIYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            G  + E+   +    EK       P      V  V++ C+  D   RP   ++ + F  
Sbjct: 219 AGLRLAEVPDLL----EKGERLAQ-PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 273

Query: 312 --SQNAVYNDGEWTGLGSRALTDTSS 335
                  Y   +       A      
Sbjct: 274 MARDPPRYLVIKRESGPGIAPGPEPH 299

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 93.7 bits (233), Expect = 2e-20
 Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 30/293 (10%)

Query: 28  TVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK 86
           T+         W ++ T + +KH++G G +G+V+                +AVK    LK
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKT---LK 254

Query: 87  EDCAKVFVNKF-EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR 142
           ED  +  V +F +E  +  + +    V  L G+        I  +F   G++ D + +  
Sbjct: 255 EDTME--VEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPPFYIITEFMTYGNLLDYLRECN 311

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
             ++    +L    Q++  +  L     +  NL   N L+ E+  + + DFG     L R
Sbjct: 312 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG-----LSR 366

Query: 203 SLSDSDMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGK 258
            ++        G      P +W  PE       S ++D W FG  + E+ T G+ P+ G 
Sbjct: 367 LMTGDTYTAHAGA---KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423

Query: 259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            + ++Y  +         P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 424 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 92.9 bits (231), Expect = 3e-20
 Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 32/283 (11%)

Query: 38  PW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
            W I   SL+L+ ++G+G FG+VW+ T       ++    +A+K    LK     +    
Sbjct: 178 AWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKT---LKPGT--MSPEA 225

Query: 97  F---EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDIL 152
           F    ++  K R  + V  L+ + V    I I  ++   GS+ D +  + G  L LP ++
Sbjct: 226 FLQEAQVMKKLRHEKLVQ-LYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 283

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
               Q+A G++ +  +  +  +L+ +N+L+ E+    + DFG     L R + D++   R
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTAR 338

Query: 213 LGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV 268
            G      P +W  PE    G  + ++D W FG  + E+ T G  P+ G    E+    V
Sbjct: 339 QGA---KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-V 394

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            +  +   P   P ++ +++  C+  +   RP    +    E 
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 90.9 bits (226), Expect = 4e-20
 Identities = 62/333 (18%), Positives = 128/333 (38%), Gaps = 46/333 (13%)

Query: 8   HKPAASFEYELFEGDPDHLRTVVATPTQTR-PW-IDPTSLKLKHRIGRGPFGDVWLATHH 65
           +      +Y++   +  + +  + +  + R P   +   LK   ++G+G FG V +  + 
Sbjct: 4   YHHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYD 63

Query: 66  QSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGK 122
              D+  E   +AVK    L+    +  +  FE   E+    +   ++    G+    G+
Sbjct: 64  PLQDNTGE--VVAVKK---LQHSTEEH-LRDFEREIEILKSLQ-HDNIVKYKGVCYSAGR 116

Query: 123 --ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN 179
             + + M++   GS+ D + Q+   ++    +L+Y  Q+ KG+  L +   +  +L   N
Sbjct: 117 RNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 175

Query: 180 LLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN-----YMAPEQWEPEVRGPISF 234
           +L+   +++ +GDFG     L + L       ++  P      + AP   E       S 
Sbjct: 176 ILVENENRVKIGDFG-----LTKVLPQDKEYYKVKEPGESPIFWYAP---ESLTESKFSV 227

Query: 235 ETDTWGFGCSIMEMLT----------------GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
            +D W FG  + E+ T                G        V  +   +      P  P 
Sbjct: 228 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-PD 286

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           G P  +  ++  C+  ++  RP   D+    + 
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 93.4 bits (232), Expect = 4e-20
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 27/286 (9%)

Query: 35  QTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF 93
            TR + I    ++L   IG G FGDV    +       +    +A+K     K   +   
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYM---SPENPAMAVAIKT---CKNCTSDSV 434

Query: 94  VNKF-EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
             KF +E     +F     V  L G+ +    + I M+    G +   + Q R   L L 
Sbjct: 435 REKFLQEALTMRQFDHPHIVK-LIGV-ITENPVWIIMELCTLGELRSFL-QVRKFSLDLA 491

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
            ++ Y  QL+  ++ L S   +  ++   N+L+S +D + LGDFG     L R + DS  
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTY 546

Query: 210 ALRLGT--P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
                   P  +MAPE          +  +D W FG  + E+L  G++P+ G    ++  
Sbjct: 547 YKASKGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603

Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            +   +  P  P   PP + +++  C+ YD   RP   ++     +
Sbjct: 604 RIENGERLPM-PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 90.0 bits (224), Expect = 5e-20
 Identities = 58/282 (20%), Positives = 106/282 (37%), Gaps = 32/282 (11%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W IDP  L     +G G FG V           +   +++A+KM   +KE       ++F
Sbjct: 19  WEIDPKDLTFLKELGTGQFGVVKYGK-------WRGQYDVAIKM---IKEGSMS--EDEF 66

Query: 98  -EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
            EE  +       + V  L+G+      I I  ++   G + + + ++   +     +L 
Sbjct: 67  IEEAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLE 124

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
               + + +  L S   L  +L   N L+++   + + DFG     L R + D +    +
Sbjct: 125 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-----LSRYVLDDEYTSSV 179

Query: 214 GTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI 269
           G+     P +W  PEV      S ++D W FG  + E+ + G  P+   +  E    +  
Sbjct: 180 GS---KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
                  P      V  ++  C+      RP    +L     
Sbjct: 237 GLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 90.0 bits (224), Expect = 5e-20
 Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 34/285 (11%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFE 98
           +    L+    +GRG +G V    H  S         +AVK +   +     K  +    
Sbjct: 4   VKADDLEPIMELGRGAYGVVEKMRHVPSG------QIMAVKRIRATVNSQEQKRLLM--- 54

Query: 99  ELFPKFRESQS--VCWLHGISVINGKICIAMKFYEGSVGD--RIAQQRGGKLPLPDILRY 154
           +L    R          +G     G + I M+  + S+    +    +G  +P   + + 
Sbjct: 55  DLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 114

Query: 155 GIQLAKGISDLHSIGLLVLN-----LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
            + + K +  LHS     L+     +KPSN+L++   Q+ + DFGI        L D  +
Sbjct: 115 AVSIVKALEHLHS----KLSVIHRDVKPSNVLINALGQVKMCDFGI-----SGYLVDD-V 164

Query: 210 ALR--LGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS 266
           A     G   YMAPE+  PE+     S ++D W  G +++E+     P+           
Sbjct: 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 224

Query: 267 VVIKKEKPCIPSGL-PPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            V+++  P +P+        +    C + + + RP   +++ H F
Sbjct: 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 92.2 bits (229), Expect = 9e-20
 Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 32/283 (11%)

Query: 38  PW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
            W I   SL+L+ ++G+G FG+VW+ T + +         +A+K    LK     +    
Sbjct: 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKT---LKPGT--MSPEA 308

Query: 97  F---EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDIL 152
           F    ++  K R  + V  L+ + V    I I  ++   GS+ D +  + G  L LP ++
Sbjct: 309 FLQEAQVMKKLRHEKLVQ-LYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 366

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
               Q+A G++ +  +  +  +L+ +N+L+ E+    + DFG     L R + D++   R
Sbjct: 367 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTAR 421

Query: 213 LGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV 268
            G      P +W  PE    G  + ++D W FG  + E+ T G  P+ G    E+   V 
Sbjct: 422 QGA---KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            +  +   P   P ++ +++  C+  +   RP    +    E 
Sbjct: 479 -RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 90.9 bits (226), Expect = 1e-19
 Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 26/253 (10%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKEDCAKVFVNKFEELFPKFRE 106
           IGRG F +V +    Q+   +      A+K++    +  + + +       E       +
Sbjct: 69  IGRGAFSEVAVVKMKQTGQVY------AMKIMNKWDMLKRGEVSCFRE---ERDVLVNGD 119

Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGD--RIAQQRGGKLPLPDILRYGIQLAKGISD 164
            + +  LH        + + M++Y G  GD   +  + G ++P      Y  ++   I  
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIVMAIDS 177

Query: 165 LHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE-- 222
           +H +G +  ++KP N+LL     + L DFG    L       S +A+  GTP+Y++PE  
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV--GTPDYLSPEIL 235

Query: 223 --QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK---PCIP 277
                    G    E D W  G    EM  G  P++  S  E Y  +V  KE    P + 
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVD 295

Query: 278 SGLPPAVENVIIG 290
            G+P    + I  
Sbjct: 296 EGVPEEARDFIQR 308

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 49/276 (17%), Positives = 94/276 (34%), Gaps = 51/276 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            L   +G+G   +V+   H ++          A+K+          +   +  ++    R
Sbjct: 12  LLSDILGQGATANVFRGRHKKTG------DLFAIKV-------FNNISFLRPVDVQ--MR 56

Query: 106 ESQ--------SVCWLHGI--SVINGKICIAMKFYE-GSVGDRIAQ-QRGGKLPLPDILR 153
           E +        ++  L  I          + M+F   GS+   + +      LP  + L 
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLS----EHDQLVLGDFGIPYLLLGRSLSDSD- 208
               +  G++ L   G++  N+KP N++            L DFG       R L D + 
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG-----AARELEDDEQ 171

Query: 209 MALRLGTPNYMAPE-----QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF----GKS 259
                GT  Y+ P+         + +       D W  G +     TG  P+      + 
Sbjct: 172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231

Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD 295
            +E+ + ++  K     PSG    V+    G  ++ 
Sbjct: 232 NKEVMYKIITGK-----PSGAISGVQKAENGPIDWS 262

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 45/302 (14%)

Query: 38  PW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           P   +   LK   ++G+G FG V +  +    D+  E   +AVK    L+    +  +  
Sbjct: 4   PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKK---LQHSTEEH-LRD 57

Query: 97  FE---ELFPKFRESQSVCWLHGISVINGK--ICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           FE   E+    +   ++    G+    G+  + + M++   GS+ D + Q+   ++    
Sbjct: 58  FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIK 115

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
           +L+Y  Q+ KG+  L +   +  +L   N+L+   +++ +GDFG     L + L      
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEF 170

Query: 211 LRLGTPN-----YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT--------------- 250
            ++  P      + AP   E       S  +D W FG  + E+ T               
Sbjct: 171 FKVKEPGESPIFWYAP---ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227

Query: 251 -GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            G        V  +   +      P  P G P  +  ++  C+  ++  RP   D+    
Sbjct: 228 IGNDKQGQMIVFHLIELLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286

Query: 310 ES 311
           + 
Sbjct: 287 DQ 288

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 89.3 bits (222), Expect = 2e-19
 Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 43/297 (14%)

Query: 33  PTQT-RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           P Q     +  T  K    +G G FG V+        +       +A+K    L+E  + 
Sbjct: 4   PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKE---LREATSP 58

Query: 92  VFVNKFEELFPKFRESQS--------VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQR 142
               +         E+          VC L GI  +   + +  +    G + D + ++ 
Sbjct: 59  KANKEI------LDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYV-REH 110

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
              +    +L + +Q+AKG++ L    L+  +L   N+L+     + + DFG     L +
Sbjct: 111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-----LAK 165

Query: 203 SLSDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGK 258
            L   +            P +W   E       + ++D W +G ++ E++T G +P+ G 
Sbjct: 166 LLGAEEKEYH--AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223

Query: 259 SVEEIYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
              EI   +    EK    P  P      V  +++ C+  D  +RP   +++  F  
Sbjct: 224 PASEISSIL----EKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 90.1 bits (224), Expect = 2e-19
 Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 33/261 (12%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK------VFVNK--FEELFP 102
           IG+G FG V +   + +   +      A+K +   K+ C +      VF      + L  
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMY------AMKYMN--KQKCVERNEVRNVFKELQIMQGLEH 74

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGD-RIAQQRGGKLPLPDILRYGIQLAKG 161
            F     +  L         + + +    G  GD R   Q+        +  +  +L   
Sbjct: 75  PF-----LVNLWYSFQDEEDMFMVVDLLLG--GDLRYHLQQNVHFKEETVKLFICELVMA 127

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           +  L +  ++  ++KP N+LL EH  + + DF I  +L   +   + MA   GT  YMAP
Sbjct: 128 LDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MA---GTKPYMAP 183

Query: 222 EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---VEEIYHSVVIKKEKPCIPS 278
           E +        SF  D W  G +  E+L G +P+  +S    +EI H+   +      PS
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT--FETTVVTYPS 241

Query: 279 GLPPAVENVIIGCFEYDLRNR 299
                + +++    E +   R
Sbjct: 242 AWSQEMVSLLKKLLEPNPDQR 262

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 88.6 bits (220), Expect = 2e-19
 Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 39/287 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFE 98
            +   L+    +G G  G VW     ++       H +AVK M     ++  K  +    
Sbjct: 22  AEINDLENLGEMGSGTCGQVWKMRFRKTG------HVIAVKQMRRSGNKEENKRILM--- 72

Query: 99  ELFPKFRESQS--VCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
           +L    +      +    G  + N  + IAM+       +++ ++  G +P   + +  +
Sbjct: 73  DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCA-EKLKKRMQGPIPERILGKMTV 131

Query: 157 QLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR--L 213
            + K +  L    G++  ++KPSN+LL E  Q+ L DFGI        L D   A     
Sbjct: 132 AIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI-----SGRLVDD-KAKDRSA 185

Query: 214 GTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV---- 267
           G   YMAPE        +       D W  G S++E+ TG  P+          +     
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN------CKTDFEVL 239

Query: 268 --VIKKEKPCIPSGL--PPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
             V+++E P +P  +      ++ +  C   D R RP    +L H+F
Sbjct: 240 TKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 89.8 bits (223), Expect = 3e-19
 Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 50/264 (18%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           IGRG FG+V +     +   F      A+K+L            NK+E L    + +++ 
Sbjct: 82  IGRGAFGEVAVVKLKNADKVF------AMKIL------------NKWEML----KRAETA 119

Query: 111 C--------------W---LHGISVINGKICIAMKFYEGSVGD--RIAQQRGGKLPLPDI 151
           C              W   LH     +  + + M +Y G  GD   +  +   +LP    
Sbjct: 120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG--GDLLTLLSKFEDRLPEEMA 177

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
             Y  ++   I  +H +  +  ++KP N+L+  +  + L DFG    L+      S +A+
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237

Query: 212 RLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
             GTP+Y++PE  Q     +G    E D W  G  + EML G  P++ +S+ E Y  ++ 
Sbjct: 238 --GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295

Query: 270 KKEK---PCIPSGLPPAVENVIIG 290
            KE+   P   + +    +++I  
Sbjct: 296 HKERFQFPTQVTDVSENAKDLIRR 319

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 90.6 bits (225), Expect = 3e-19
 Identities = 60/265 (22%), Positives = 96/265 (36%), Gaps = 41/265 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--------EDCAKVFVNKFEELFP 102
           +G+G FG+V       +   +      A K L   K        E  A       E++  
Sbjct: 192 LGKGGFGEVCACQVRATGKMY------ACKKLE--KKRIKKRKGEAMALNEKQILEKVNS 243

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLA 159
           +F     V  L         +C+ +    G  GD    I        P    + Y  ++ 
Sbjct: 244 RF-----VVSLAYAYETKDALCLVLTLMNG--GDLKFHIYHMGQAGFPEARAVFYAAEIC 296

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL-RLGTPNY 218
            G+ DLH   ++  +LKP N+LL +H  + + D G     L   + +      R+GT  Y
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLG-----LAVHVPEGQTIKGRVGTVGY 351

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK----SVEEIYHSVVIKKEKP 274
           MAPE  + E     +F  D W  GC + EM+ G  P+  +      EE+     +K+   
Sbjct: 352 MAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL--VKEVPE 406

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNR 299
                  P   ++       D   R
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAER 431

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 88.8 bits (221), Expect = 3e-19
 Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 37/261 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML-----LPLKE-DCAK----VFVNKFEEL 100
           +G+G FG V+LA   ++   F      A+K L     L   + +C      V    +E  
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFF------AIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
           F        +  +         +   M++  G  GD +   Q   K  L     Y  ++ 
Sbjct: 79  F--------LTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYAAEII 128

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
            G+  LHS G++  +LK  N+LL +   + + DFG    +   ++          GTP+Y
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG----MCKENMLGDAKTNTFCGTPDY 184

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +APE    +     +   D W FG  + EML G  P+ G+  EE++HS  I+ + P  P 
Sbjct: 185 IAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS--IRMDNPFYPR 239

Query: 279 GLPPAVENVIIGCFEYDLRNR 299
            L    +++++  F  +   R
Sbjct: 240 WLEKEAKDLLVKLFVREPEKR 260

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 88.1 bits (219), Expect = 3e-19
 Identities = 71/297 (23%), Positives = 108/297 (36%), Gaps = 54/297 (18%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFE 98
                LK    IGRG +G V    H  S         +AVK +   + E   K  +    
Sbjct: 19  FTAEDLKDLGEIGRGAYGSVNKMVHKPSG------QIMAVKRIRSTVDEKEQKQLLM--- 69

Query: 99  ELFPKFRESQS--VCWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILR 153
           +L    R S    +   +G     G   I M+    S       +       +P   + +
Sbjct: 70  DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK 129

Query: 154 YGIQLAKGISDLHSIGLLVLNL-----KPSNLLLSEHDQLVLGDFGIPYLLLGRS--LSD 206
             +   K ++ L       L +     KPSN+LL     + L DFGI       S  L D
Sbjct: 130 ITLATVKALNHLKE----NLKIIHRDIKPSNILLDRSGNIKLCDFGI-------SGQLVD 178

Query: 207 SDMALR--LGTPNYMAPEQWEPEVRGPI-SFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
           S +A     G   YMAPE+ +P          +D W  G ++ E+ TG  P+        
Sbjct: 179 S-IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK------ 231

Query: 264 YHSV------VIKKEKPCIPSGLP----PAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           ++SV      V+K + P + +       P+  N +  C   D   RP   ++L H F
Sbjct: 232 WNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 90.9 bits (225), Expect = 3e-19
 Identities = 62/275 (22%), Positives = 107/275 (38%), Gaps = 25/275 (9%)

Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLK 86
                 R  +  T       +G+G FG V L+    + + +      AVK+L    +   
Sbjct: 329 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELY------AVKILKKDVVIQD 382

Query: 87  EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGK 145
           +D     V K   +     +   +  LH       ++   M++  G  GD +   Q+ G+
Sbjct: 383 DDVECTMVEK--RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGR 438

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
              P  + Y  ++A G+  L S G++  +LK  N++L     + + DFG    +   ++ 
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG----MCKENIW 494

Query: 206 DSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
           D        GTP+Y+APE        P     D W FG  + EML G  P+ G+  +E++
Sbjct: 495 DGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 551

Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            S  I +     P  +      +  G        R
Sbjct: 552 QS--IMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 584

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 88.8 bits (220), Expect = 4e-19
 Identities = 49/276 (17%), Positives = 94/276 (34%), Gaps = 51/276 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            L   +G+G   +V+   H ++          A+K+          +   +  ++    R
Sbjct: 12  LLSDILGQGATANVFRGRHKKTG------DLFAIKV-------FNNISFLRPVDVQ--MR 56

Query: 106 E--------SQSVCWLHGI--SVINGKICIAMKFYE-GSVGDRIAQ-QRGGKLPLPDILR 153
           E         +++  L  I          + M+F   GS+   + +      LP  + L 
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLS----EHDQLVLGDFGIPYLLLGRSLSDSD- 208
               +  G++ L   G++  N+KP N++            L DFG       R L D + 
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG-----AARELEDDEQ 171

Query: 209 MALRLGTPNYMAPE-----QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF----GKS 259
                GT  Y+ P+         + +       D W  G +     TG  P+      + 
Sbjct: 172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231

Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD 295
            +E+ + ++  K     PSG    V+    G  ++ 
Sbjct: 232 NKEVMYKIITGK-----PSGAISGVQKAENGPIDWS 262

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 88.1 bits (219), Expect = 6e-19
 Identities = 67/289 (23%), Positives = 111/289 (38%), Gaps = 51/289 (17%)

Query: 30  VATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-----LP 84
           +     + P   P+       IG+G FG V LA H      +      AVK+L     L 
Sbjct: 25  INLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFY------AVKVLQKKAILK 78

Query: 85  LKE-DCAK----VFVNKFE-----ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSV 134
            KE         V +   +      L   F   Q+            K+   + +  G  
Sbjct: 79  KKEEKHIMSERNVLLKNVKHPFLVGLHFSF---QT----------ADKLYFVLDYING-- 123

Query: 135 GD---RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG 191
           G+    +  QR      P    Y  ++A  +  LHS+ ++  +LKP N+LL     +VL 
Sbjct: 124 GELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLT 181

Query: 192 DFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT 250
           DFG    L   ++  +       GTP Y+APE      + P     D W  G  + EML 
Sbjct: 182 DFG----LCKENIEHNSTTSTFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLY 234

Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           G+ P++ ++  E+Y +  I  +   +   +  +  +++ G  + D   R
Sbjct: 235 GLPPFYSRNTAEMYDN--ILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 87.0 bits (216), Expect = 6e-19
 Identities = 67/314 (21%), Positives = 124/314 (39%), Gaps = 43/314 (13%)

Query: 25  HLRTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
            + +     T+  P   +   LK    +G G FG V L  +    D+  E  ++AVK   
Sbjct: 2   DIVSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKS-- 57

Query: 84  PLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGK--ICIAMKFYE-GSVGDR 137
            LK +     +   +   E+       +++    GI   +G   I + M+F   GS+ + 
Sbjct: 58  -LKPESGGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY 115

Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
           +  +   K+ L   L+Y +Q+ KG+  L S   +  +L   N+L+    Q+ +GDFG   
Sbjct: 116 L-PKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG--- 171

Query: 198 LLLGRSLSDSDMALRLGTPN-----YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-- 250
             L +++        +         + APE      +      +D W FG ++ E+LT  
Sbjct: 172 --LTKAIETDKEYYTVKDDRDSPVFWYAPECLM---QSKFYIASDVWSFGVTLHELLTYC 226

Query: 251 -------------GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLR 297
                                +V  + +++   K  PC P   P  V  ++  C+E+   
Sbjct: 227 DSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRKCWEFQPS 285

Query: 298 NRPLMADILHAFES 311
           NR    +++  FE+
Sbjct: 286 NRTSFQNLIEGFEA 299

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 87.7 bits (218), Expect = 6e-19
 Identities = 55/285 (19%), Positives = 105/285 (36%), Gaps = 25/285 (8%)

Query: 21  GDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK 80
           G  +  +        +   +   + +    +G+G FG V LA   ++ D +      AVK
Sbjct: 1   GPKESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLY------AVK 54

Query: 81  ML----LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD 136
           +L    +   +D       K   +    R    +  L        ++   M+F  G  GD
Sbjct: 55  VLKKDVILQDDDVECTMTEK--RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG--GD 110

Query: 137 RIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI 195
            +   Q+  +        Y  ++   +  LH  G++  +LK  N+LL       L DFG 
Sbjct: 111 LMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG- 169

Query: 196 PYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
              +    + +        GTP+Y+APE  +           D W  G  + EML G  P
Sbjct: 170 ---MCKEGICNGVTTATFCGTPDYIAPEILQ---EMLYGPAVDWWAMGVLLYEMLCGHAP 223

Query: 255 WFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +  ++ ++++ +  I  ++   P+ L      ++      +   R
Sbjct: 224 FEAENEDDLFEA--ILNDEVVYPTWLHEDATGILKSFMTKNPTMR 266

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 86.4 bits (215), Expect = 6e-19
 Identities = 59/288 (20%), Positives = 112/288 (38%), Gaps = 46/288 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-- 108
           +G+G F  V+ A    +        E+A+KM+     D   ++     +      E +  
Sbjct: 19  LGKGSFAGVYRAESIHTG------LEVAIKMI-----DKKAMYKAGMVQRV--QNEVKIH 65

Query: 109 ------SVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
                 S+  L+     +  + + ++    G +   + + R       +   +  Q+  G
Sbjct: 66  CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITG 124

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS---DSDMALRL---GT 215
           +  LHS G+L  +L  SNLLL+ +  + + DFG         L+              GT
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG---------LATQLKMPHEKHYTLCGT 175

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
           PNY++PE      R     E+D W  GC    +L G  P+   +V+   +   +      
Sbjct: 176 PNYISPEIAT---RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK--VVLADYE 230

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF--ESSQNAVYNDG 320
           +PS L    +++I      +  +R  ++ +L H F   +S     ++G
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 88.0 bits (218), Expect = 6e-19
 Identities = 61/289 (21%), Positives = 119/289 (41%), Gaps = 25/289 (8%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFE 98
           +     +    +G G  G V+  +H  S         +A K + L +K       + + +
Sbjct: 30  LKDDDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQ 83

Query: 99  ELFPKFRESQS--VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
            L     E  S  +   +G    +G+I I M+  + GS+   +  ++ G++P   + +  
Sbjct: 84  VL----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVS 137

Query: 156 IQLAKGISDLHSIGLLV-LNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
           I + KG++ L     ++  ++KPSN+L++   ++ L DFG+        L DS     +G
Sbjct: 138 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVG 192

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           T +YM+PE+ +       S ++D W  G S++EM  G  P      +E+      + E  
Sbjct: 193 TRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 249

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT 323
              +   P      +  F  D R    + ++L    +        G ++
Sbjct: 250 AAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS 298

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 86.9 bits (216), Expect = 1e-18
 Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 30/257 (11%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML-----LPLKE-DCAKVFVNKFEELFPKF 104
           +G+G FG V L     +   +      A+K+L     +   E           +     F
Sbjct: 13  LGKGTFGKVILVREKATGRYY------AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
                +  L      + ++C  M++  G  G+      R           YG ++   + 
Sbjct: 67  -----LTALKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIVSALE 119

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPE 222
            LHS  ++  ++K  NL+L +   + + DFG    L    +SD        GTP Y+APE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFCGTPEYLAPE 175

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
             E           D WG G  + EM+ G  P++ +  E ++    I  E+   P  L P
Sbjct: 176 VLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL--ILMEEIRFPRTLSP 230

Query: 283 AVENVIIGCFEYDLRNR 299
             ++++ G  + D + R
Sbjct: 231 EAKSLLAGLLKKDPKQR 247

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 85.8 bits (213), Expect = 1e-18
 Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 30/282 (10%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W ++ T + +KH++G G +G+V+                +AVK    LKED  +  V +F
Sbjct: 8   WEMERTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKT---LKEDTME--VEEF 56

Query: 98  -EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
            +E  +  + +    V  L G+        I  +F   G++ D + +    ++    +L 
Sbjct: 57  LKEAAVMKEIKHPNLVQ-LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
              Q++  +  L     +  +L   N L+ E+  + + DFG     L R ++        
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG-----LSRLMTGDTYTAHA 170

Query: 214 GT--P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI 269
           G   P  + APE          S ++D W FG  + E+ T G+ P+ G  + ++Y  +  
Sbjct: 171 GAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
                  P G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 228 DYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 87.8 bits (218), Expect = 1e-18
 Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 43/303 (14%)

Query: 26  LRTVVATPTQTRPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
           L     +    +PW      I   SLKL+ ++G G FG+VW+AT       ++++ ++AV
Sbjct: 165 LSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAV 217

Query: 80  KMLLPLKEDCAKVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGD 136
           K    +K       V  F  E    K  +   +  LH + V    I I  +F   GS+ D
Sbjct: 218 KT---MKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLD 271

Query: 137 RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP 196
            +    G K PLP ++ +  Q+A+G++ +     +  +L+ +N+L+S      + DFG  
Sbjct: 272 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-- 329

Query: 197 YLLLGRSLSDSDMALRLGT--P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GI 252
              L R + D++   R G   P  + APE       G  + ++D W FG  +ME++T G 
Sbjct: 330 ---LARVIEDNEYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGR 383

Query: 253 QPWFGKSVEEIYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHA 308
            P+ G S  E+  ++    E+    P  P   P  + N+++ C++     RP    I   
Sbjct: 384 IPYPGMSNPEVIRAL----ERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSV 438

Query: 309 FES 311
            + 
Sbjct: 439 LDD 441

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 86.2 bits (214), Expect = 1e-18
 Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 32/293 (10%)

Query: 32  TPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
              ++    I+ + + ++  IG G  G+V                 +A+K    LK    
Sbjct: 37  RAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPG---QRDVPVAIKA---LKAGYT 90

Query: 91  KVFVNKFEE---LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKL 146
           +     F     +  +F     +  L G+        I  ++ E GS+   + +   G+ 
Sbjct: 91  ERQRRDFLSEASIMGQFDHPNIIR-LEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQF 148

Query: 147 PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD 206
            +  ++     +  G+  L  +G +  +L   N+L+  +    + DFG     L R L D
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG-----LSRVLED 203

Query: 207 SDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEE 262
              A    T     P +W  PE       S  +D W FG  + E+L  G +P++  +  +
Sbjct: 204 DPDAAYTTT-GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262

Query: 263 IYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           +  SV    E+    P  P G P A+  +++ C+  D   RP  + I+   ++
Sbjct: 263 VISSV----EEGYRLPA-PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 55/306 (17%), Positives = 115/306 (37%), Gaps = 49/306 (16%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
           +    + +   +G+G FG V+         D +    +A+K    + E  +     +F  
Sbjct: 22  VAREKITMSRELGQGSFGMVYEGVAKGVVKD-EPETRVAIKT---VNEAASMRERIEFLN 77

Query: 99  --ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD-----------RIAQQRGGK 145
              +  +F     V  L G+        + M+      GD                    
Sbjct: 78  EASVMKEFNCHHVVR-LLGVVSQGQPTLVIMELMTR--GDLKSYLRSLRPAMANNPVLAP 134

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
             L  +++   ++A G++ L++   +  +L   N +++E   + +GDFG     + R + 
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG-----MTRDIY 189

Query: 206 DSDMALRLGT---P-NYMAPEQWEPEVRGPISF-------ETDTWGFGCSIMEMLT-GIQ 253
           ++D   + G    P  +M+PE          S         +D W FG  + E+ T   Q
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPE----------SLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239

Query: 254 PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ 313
           P+ G S E++   V+        P   P  +  ++  C++Y+ + RP   +I+ + +   
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298

Query: 314 NAVYND 319
              + +
Sbjct: 299 EPGFRE 304

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 70/309 (22%), Positives = 117/309 (37%), Gaps = 37/309 (11%)

Query: 22  DPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM 81
           +P++      +       +   ++ L   +G G FG+V+        +D     ++AVK 
Sbjct: 9   NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND-PSPLQVAVKT 67

Query: 82  LLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD-- 136
              L E C++     F     +  KF     V    G+S+ +    I M+   G  GD  
Sbjct: 68  ---LPEVCSEQDELDFLMEALIISKFNHQNIVR-CIGVSLQSLPRFILMELMAG--GDLK 121

Query: 137 ------RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-DQLV 189
                 R    +   L + D+L     +A G   L     +  ++   N LL+      V
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181

Query: 190 L--GDFGIPYLLLGRSLSDSDMALRLGTPNY-----MAPEQWEPEVRGPISFETDTWGFG 242
              GDFG     + R +  +    R G         M PE +   + G  + +TDTW FG
Sbjct: 182 AKIGDFG-----MARDIYRASYY-RKGGCAMLPVKWMPPEAF---MEGIFTSKTDTWSFG 232

Query: 243 CSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL 301
             + E+ + G  P+  KS +E+   V         P   P  V  ++  C+++   +RP 
Sbjct: 233 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPN 291

Query: 302 MADILHAFE 310
            A IL   E
Sbjct: 292 FAIILERIE 300

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 86.7 bits (215), Expect = 2e-18
 Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 40/257 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK----FRE 106
           IGRG FG+V L  H  +   +      A+K+L            +KFE +       F E
Sbjct: 77  IGRGAFGEVQLVRHKSTRKVY------AMKLL------------SKFEMIKRSDSAFFWE 118

Query: 107 SQSV---------CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
            + +           L      +  + + M++  G  GD +       +P      Y  +
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAE 176

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           +   +  +HS+G +  ++KP N+LL +   L L DFG    +    +   D A+  GTP+
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPD 234

Query: 218 YMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
           Y++PE  + +    G    E D W  G  + EML G  P++  S+   Y  ++  K    
Sbjct: 235 YISPEVLKSQGG-DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 293

Query: 276 IPSG--LPPAVENVIIG 290
            P    +    +N+I  
Sbjct: 294 FPDDNDISKEAKNLICA 310

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 85.5 bits (212), Expect = 3e-18
 Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 39/296 (13%)

Query: 32  TPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
                    I P+ +  +  IG G FG+V+      S+   +    +A+K    LK    
Sbjct: 32  QAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEV--PVAIKT---LKAGYT 86

Query: 91  KVFVNKF-EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIA--QQRGGK 145
           +     F  E  +  +F     +  L G+      + I  ++ E   G      +++ G+
Sbjct: 87  EKQRVDFLGEAGIMGQFSHHNIIR-LEGVISKYKPMMIITEYMEN--GALDKFLREKDGE 143

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
             +  ++     +A G+  L ++  +  +L   N+L++ +    + DFG     L R L 
Sbjct: 144 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG-----LSRVLE 198

Query: 206 DSDMA--LRLGT--P-NYMAPEQWEPEVRGPISF-----ETDTWGFGCSIMEMLT-GIQP 254
           D   A     G   P  + APE         IS+      +D W FG  + E++T G +P
Sbjct: 199 DDPEATYTTSGGKIPIRWTAPEA--------ISYRKFTSASDVWSFGIVMWEVMTYGERP 250

Query: 255 WFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           ++  S  E+  ++      P  P   P A+  +++ C++ +   RP  ADI+   +
Sbjct: 251 YWELSNHEVMKAINDGFRLPT-PMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 86.4 bits (214), Expect = 3e-18
 Identities = 52/295 (17%), Positives = 108/295 (36%), Gaps = 45/295 (15%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
             +  +G G  G V      Q          +AVK +L    D A + +    +L  +  
Sbjct: 18  VSEKILGYGSSGTVVFQGSFQG-------RPVAVKRMLIDFCDIALMEI----KLLTESD 66

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-----QRGGKLPLPDILRYGIQLAK 160
           +  +V   +     +  + IA++    ++ D +       +        + +    Q+A 
Sbjct: 67  DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHD-------------QLVLGDFGI-PYLLLGRSLSD 206
           G++ LHS+ ++  +LKP N+L+S                ++++ DFG+   L  G+S   
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186

Query: 207 SDMALRLGTPNYMAPEQ----WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
           +++    GT  + APE        + +  ++   D +  GC    +L+  +  FG     
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246

Query: 263 IYHSVVIKKEKPCIPSGLPPAVENV-------IIGCFEYDLRNRPLMADIL-HAF 309
             +   I +    +         ++       I    ++D   RP    +L H  
Sbjct: 247 ESN---IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 86.7 bits (215), Expect = 4e-18
 Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 31/287 (10%)

Query: 22  DPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM 81
           D      +  +  + +  +     +    +G+G FG V L     +      Y+  A+K+
Sbjct: 127 DNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKAT----GRYY--AMKI 180

Query: 82  L----LPLKEDCAKVFVNK--FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
           L    +  K++ A         +     F     +  L      + ++C  M++  G  G
Sbjct: 181 LKKEVIVAKDEVAHTLTENRVLQNSRHPF-----LTALKYSFQTHDRLCFVMEYANG--G 233

Query: 136 DRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDF 193
           +      R           YG ++   +  LHS   ++  +LK  NL+L +   + + DF
Sbjct: 234 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 293

Query: 194 GIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
           G    L    + D        GTP Y+APE  E           D WG G  + EM+ G 
Sbjct: 294 G----LCKEGIKDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGR 346

Query: 253 QPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            P++ +  E+++    I  E+   P  L P  ++++ G  + D + R
Sbjct: 347 LPFYNQDHEKLFEL--ILMEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 87.1 bits (216), Expect = 4e-18
 Identities = 54/265 (20%), Positives = 92/265 (34%), Gaps = 38/265 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML-----LPLKE-DCAKVFVNKFEELFPKF 104
           +GRG FG+V+      +   +      A K L        K    A V      ++  +F
Sbjct: 193 LGRGGFGEVFACQMKATGKLY------ACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGD-----RIAQQRGGKLPLPDILRYGIQLA 159
                +  L         +C+ M    G  GD         +       P  + Y  Q+ 
Sbjct: 247 -----IVSLAYAFETKTDLCLVMTIMNG--GDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL-RLGTPNY 218
            G+  LH   ++  +LKP N+LL +   + + D G    L     +         GTP +
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKGYAGTPGF 355

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK----SVEEIYHSVVIKKEKP 274
           MAPE    E      F  D +  G ++ EM+    P+  +      +E+     + ++  
Sbjct: 356 MAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR--VLEQAV 410

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNR 299
             P    PA ++      + D   R
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKR 435

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 85.4 bits (212), Expect = 4e-18
 Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 37/281 (13%)

Query: 31  ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-----LPL 85
                 R  +  T       +G+G FG V L+    + + +      AVK+L     +  
Sbjct: 8   FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELY------AVKILKKDVVIQD 61

Query: 86  KE-DCAK----VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ 140
            + +C      V     +  F        +  LH       ++   M++  G  GD +  
Sbjct: 62  DDVECTMVEKRVLALPGKPPF--------LTQLHSCFQTMDRLYFVMEYVNG--GDLMYH 111

Query: 141 -QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL 199
            Q+ G+   P  + Y  ++A G+  L S G++  +LK  N++L     + + DFG    +
Sbjct: 112 IQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG----M 167

Query: 200 LGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
              ++ D        GTP+Y+APE        P     D W FG  + EML G  P+ G+
Sbjct: 168 CKENIWDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224

Query: 259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
             +E++ S  I +     P  +      +  G        R
Sbjct: 225 DEDELFQS--IMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 263

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 85.1 bits (211), Expect = 5e-18
 Identities = 55/284 (19%), Positives = 115/284 (40%), Gaps = 33/284 (11%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           +D T++ +   +G G FG+V        +        +A+K    LK    +     F  
Sbjct: 42  LDATNISIDKVVGAGEFGEVCSGRLKLPSKK---EISVAIKT---LKVGYTEKQRRDFLG 95

Query: 100 ---LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
              +  +F     +  L G+   +  + I  ++ E    D   ++   +  +  ++    
Sbjct: 96  EASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT- 215
            +A G+  L  +G +  +L   N+L++ +    + DFG     LGR L D   A      
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LGRVLEDDPEAAYTTRG 209

Query: 216 ---P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIK 270
              P  + +PE          +  +D W +G  + E+++ G +P++  S +++  +V   
Sbjct: 210 GKIPIRWTSPEAIA---YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV--- 263

Query: 271 KEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            ++    P  P   P A+  +++ C++ D  NRP    I+   +
Sbjct: 264 -DEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 83.5 bits (207), Expect = 6e-18
 Identities = 53/292 (18%), Positives = 106/292 (36%), Gaps = 48/292 (16%)

Query: 40  IDPTSLKL-KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
           +   +L +    +G G FG V    +       D    +A+K+   LK+   K    +  
Sbjct: 6   LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQID----VAIKV---LKQGTEKADTEEMM 58

Query: 99  E---LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRY 154
               +  +      V  L G+      + + M+    G +   +   +  ++P+ ++   
Sbjct: 59  REAQIMHQLDNPYIVR-LIGV-CQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAEL 115

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             Q++ G+  L     +  +L   N+LL       + DFG     L ++L   D      
Sbjct: 116 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG-----LSKALGADDSYYTAR 170

Query: 215 TPN-----YMAPEQWEPEVRGPISF-----ETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
           +       + APE         I+F      +D W +G ++ E L+ G +P+      E+
Sbjct: 171 SAGKWPLKWYAPEC--------INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222

Query: 264 YHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
              +    E+     C P   PP +  ++  C+ Y   +RP    +     +
Sbjct: 223 MAFI----EQGKRMEC-PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 83.0 bits (206), Expect = 7e-18
 Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 45/293 (15%)

Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      +   +LKL  R+G G FG+VW+         ++ + ++AVK    LK+   
Sbjct: 1   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKS---LKQGSM 50

Query: 91  KVFVNKF-EE--LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKL 146
               + F  E  L  + +  + V  L+ + V    I I  ++ E GS+ D +    G KL
Sbjct: 51  S--PDAFLAEANLMKQLQHQRLVR-LYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKL 106

Query: 147 PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD 206
            +  +L    Q+A+G++ +     +  +L+ +N+L+S+     + DFG     L R + D
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIED 161

Query: 207 SDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEE 262
           ++   R G      P +W  PE    G  + ++D W FG  + E++T G  P+ G +  E
Sbjct: 162 NEYTAREGA---KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218

Query: 263 IYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           +  ++    E+       P   P  +  ++  C++    +RP    +    E 
Sbjct: 219 VIQNL----ERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 83.9 bits (208), Expect = 9e-18
 Identities = 63/293 (21%), Positives = 108/293 (36%), Gaps = 40/293 (13%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFE 98
           I      L   +G+G FG V  A       +   + ++AVKM   LK D  A   + +F 
Sbjct: 20  IPEQQFTLGRMLGKGEFGSVREAQLK---QEDGSFVKVAVKM---LKADIIASSDIEEFL 73

Query: 99  ---ELFPKFRES-----QSVCWLHGISVINGKICIAMKFYEGSVGD-------RIAQQRG 143
                  +F          V              + + F +   GD           +  
Sbjct: 74  REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH--GDLHAFLLASRIGENP 131

Query: 144 GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS 203
             LPL  ++R+ + +A G+  L S   +  +L   N +L+E   + + DFG     L R 
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG-----LSRK 186

Query: 204 LSDSDMALRLGTPN-----YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFG 257
           +   D   R G  +     ++A E          +  +D W FG ++ E++T G  P+ G
Sbjct: 187 IYSGDYY-RQGCASKLPVKWLALESL---ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242

Query: 258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
               EIY+ ++        P      V +++  C+  D + RP    +    E
Sbjct: 243 IENAEIYNYLIGGNRLKQ-PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 83.1 bits (206), Expect = 1e-17
 Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 25/281 (8%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF-- 97
                +     IGRG FG V+  T   +     +    AVK    L        V++F  
Sbjct: 22  PSSLIVHFNEVIGRGHFGCVYHGTLLDND---GKKIHCAVKS---LNRITDIGEVSQFLT 75

Query: 98  E-ELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIA--QQRGGKLPLPDILR 153
           E  +   F    +V  L GI + + G   + + + +   GD     +       + D++ 
Sbjct: 76  EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKH--GDLRNFIRNETHNPTVKDLIG 132

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           +G+Q+AKG+  L S   +  +L   N +L E   + + DFG     L R + D +     
Sbjct: 133 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVH 187

Query: 214 GTPNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI 269
                  P +W   E       + ++D W FG  + E++T G  P+   +  +I   ++ 
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            +     P   P  +  V++ C+      RP  ++++    
Sbjct: 248 GRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 83.4 bits (207), Expect = 1e-17
 Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 32/260 (12%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKED---CAKVFVNKFEELFPK 103
           +G+G +G V+       A+    +   A+K+L    +          K   N  EE+   
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIF---AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAK 160
           F     +  L       GK+ + +++  G  G+   ++  +R G         Y  +++ 
Sbjct: 82  F-----IVDLIYAFQTGGKLYLILEYLSG--GELFMQL--EREGIFMEDTACFYLAEISM 132

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYM 219
            +  LH  G++  +LKP N++L+    + L DFG    L   S+ D  +     GT  YM
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG----LCKESIHDGTVTHTFCGTIEYM 188

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           APE      R   +   D W  G  + +MLTG  P+ G++ ++      I K K  +P  
Sbjct: 189 APEILM---RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK--ILKCKLNLPPY 243

Query: 280 LPPAVENVIIGCFEYDLRNR 299
           L     +++    + +  +R
Sbjct: 244 LTQEARDLLKKLLKRNAASR 263

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 83.2 bits (206), Expect = 2e-17
 Identities = 60/306 (19%), Positives = 109/306 (35%), Gaps = 54/306 (17%)

Query: 38  PW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           P   +   LK   ++G+G FG V L  +    D+      +AVK L     D  + F   
Sbjct: 17  PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGA--LVAVKQLQHSGPDQQRDFQ-- 72

Query: 97  FEELFPKFRESQ--------SVCWLHGISVINGK--ICIAMKFYE-GSVGDRIAQQRGGK 145
                   RE Q         +    G+S   G+  + + M++   G + D + Q+   +
Sbjct: 73  --------REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRAR 123

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           L    +L Y  Q+ KG+  L S   +  +L   N+L+     + + DFG     L + L 
Sbjct: 124 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG-----LAKLLP 178

Query: 206 DSDMALRLGTPN-----YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS 259
                  +  P      + AP   E       S ++D W FG  + E+ T   +     +
Sbjct: 179 LDKDYYVVREPGQSPIFWYAP---ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA 235

Query: 260 VEEIYHSV---------VIKKEK-----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                            +++  +     P  P   P  V  ++  C+    ++RP  + +
Sbjct: 236 EFLRMMGCERDVPALSRLLELLEEGQRLPA-PPACPAEVHELMKLCWAPSPQDRPSFSAL 294

Query: 306 LHAFES 311
               + 
Sbjct: 295 GPQLDM 300

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 83.6 bits (207), Expect = 2e-17
 Identities = 70/319 (21%), Positives = 121/319 (37%), Gaps = 38/319 (11%)

Query: 22  DPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM 81
           +P++      +       +   ++ L   +G G FG+V+        +D     ++AVK 
Sbjct: 50  NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND-PSPLQVAVKT 108

Query: 82  LLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD-- 136
              L E C++     F     +  KF     V    G+S+ +    I ++   G  GD  
Sbjct: 109 ---LPEVCSEQDELDFLMEALIISKFNHQNIVR-CIGVSLQSLPRFILLELMAG--GDLK 162

Query: 137 ------RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-DQLV 189
                 R    +   L + D+L     +A G   L     +  ++   N LL+      V
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 222

Query: 190 L--GDFGIPYLLLGRSLSDSDMALRLGTPNY-----MAPEQWEPEVRGPISFETDTWGFG 242
              GDFG     + R +  +    R G         M PE +   + G  + +TDTW FG
Sbjct: 223 AKIGDFG-----MARDIYRAGYY-RKGGCAMLPVKWMPPEAF---MEGIFTSKTDTWSFG 273

Query: 243 CSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL 301
             + E+ + G  P+  KS +E+   V         P   P  V  ++  C+++   +RP 
Sbjct: 274 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPN 332

Query: 302 MADILHAFES-SQNAVYND 319
            A IL   E  +Q+    +
Sbjct: 333 FAIILERIEYCTQDPDVIN 351

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 84.4 bits (209), Expect = 2e-17
 Identities = 61/284 (21%), Positives = 107/284 (37%), Gaps = 53/284 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKEDCAKVFVNKFEELF 101
           K +  +G+G FG+V L     +  +       AVK++    +  K D   +         
Sbjct: 29  KGQRVLGKGSFGEVILCKDKITGQEC------AVKVISKRQVKQKTDKESLL-------- 74

Query: 102 PKFRESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPD 150
              RE Q        ++  L+      G   +  + Y G  G   D I  +   +    D
Sbjct: 75  ---REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG--GELFDEIISR--KRFSEVD 127

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSDS 207
             R   Q+  GI+ +H   ++  +LKP NLLL    +   + + DFG+         +  
Sbjct: 128 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE----ASK 183

Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
            M  ++GT  Y+APE     + G    + D W  G  +  +L+G  P+ G +  +I    
Sbjct: 184 KMKDKIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK- 238

Query: 268 VIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNRPLMADILH 307
            ++K K          +  + +++I     Y    R    D L 
Sbjct: 239 -VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 63/311 (20%), Positives = 118/311 (37%), Gaps = 51/311 (16%)

Query: 33  PTQTRPW-IDPTSLKLKHR-IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC- 89
             + +   +D   L L+ + +G G FG V    +            +AVK+   LK +  
Sbjct: 5   EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKT----VAVKI---LKNEAN 57

Query: 90  AKVFVNKFEE---LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGK 145
                ++      +  +      V  + GI        + M+  E G +   +  Q+   
Sbjct: 58  DPALKDELLAEANVMQQLDNPYIVR-MIGI-CEAESWMLVMEMAELGPLNKYL--QQNRH 113

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           +   +I+    Q++ G+  L     +  +L   N+LL       + DFG     L ++L 
Sbjct: 114 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG-----LSKALR 168

Query: 206 DSDMALRLGTPN-----YMAPEQWEPEVRGPISF-----ETDTWGFGCSIMEMLT-GIQP 254
             +   +  T       + APE         I++     ++D W FG  + E  + G +P
Sbjct: 169 ADENYYKAQTHGKWPVKWYAPEC--------INYYKFSSKSDVWSFGVLMWEAFSYGQKP 220

Query: 255 WFGKSVEEIYHSVVIKKEK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           + G    E+   +    EK     C P+G P  + +++  C+ YD+ NRP  A +     
Sbjct: 221 YRGMKGSEVTAML----EKGERMGC-PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275

Query: 311 SSQNAVYNDGE 321
           +    V N+G 
Sbjct: 276 NYYYDVVNEGH 286

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 83.2 bits (206), Expect = 3e-17
 Identities = 61/312 (19%), Positives = 115/312 (36%), Gaps = 67/312 (21%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLAT-HHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           W      L L   +G G FG V +A       D   E   +AVKM   LK+D  +  ++ 
Sbjct: 76  WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM---LKDDATEKDLSD 132

Query: 97  FE---ELFPKFRESQSVCWLHGISVINGKICIAMKF---------------YEGSVGDRI 138
                E+     + +++  L G    +G + + +++                       I
Sbjct: 133 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 192

Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL 198
            +    ++   D++    QLA+G+  L S   +  +L   N+L++E++ + + DFG    
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG---- 248

Query: 199 LLGRSLSDSDMALRLGTPNY------------MAPEQWEPEVRGPISF-------ETDTW 239
            L R +++ D         Y            MAPE          +        ++D W
Sbjct: 249 -LARDINNID--------YYKKTTNGRLPVKWMAPE----------ALFDRVYTHQSDVW 289

Query: 240 GFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRN 298
            FG  + E+ T G  P+ G  VEE++  +         P+     +  ++  C+      
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQ 348

Query: 299 RPLMADILHAFE 310
           RP    ++   +
Sbjct: 349 RPTFKQLVEDLD 360

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 81.9 bits (203), Expect = 3e-17
 Identities = 61/288 (21%), Positives = 108/288 (37%), Gaps = 23/288 (7%)

Query: 41  DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--E 98
           +         IG+G FG V+   +    D      + A+K    L        V  F  E
Sbjct: 19  ERVVTHSDRVIGKGHFGVVYHGEYI---DQAQNRIQCAIKS---LSRITEMQQVEAFLRE 72

Query: 99  -ELFPKFRESQSVCWLHGI-SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
             L         +  L GI     G   + + +   G +   I +       + D++ +G
Sbjct: 73  GLLMRGLNHPNVLA-LIGIMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFG 130

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           +Q+A+G+  L     +  +L   N +L E   + + DFG     L R + D +       
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG-----LARDILDREYYSVQQH 185

Query: 216 PNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKK 271
            +   P +W   E       + ++D W FG  + E+LT G  P+      ++ H +   +
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR 245

Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND 319
             P  P   P ++  V+  C+E D   RP    ++   E   +A+  D
Sbjct: 246 RLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 82.2 bits (204), Expect = 3e-17
 Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 17/184 (9%)

Query: 120 NGKICIAMKFYEGSVGD---RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK 176
            GK+ + + F  G  GD   R+   +       D+  Y  +LA  +  LHS+G++  +LK
Sbjct: 98  EGKLYLILDFLRG--GDLFTRL--SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLK 153

Query: 177 PSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFE 235
           P N+LL E   + L DFG    L   S+     A    GT  YMAPE      R   +  
Sbjct: 154 PENILLDEEGHIKLTDFG----LSKESIDHEKKAYSFCGTVEYMAPEVVN---RRGHTQS 206

Query: 236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD 295
            D W FG  + EMLTG  P+ GK  +E      I K K  +P  L P  ++++   F+ +
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTM--ILKAKLGMPQFLSPEAQSLLRMLFKRN 264

Query: 296 LRNR 299
             NR
Sbjct: 265 PANR 268

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 83.6 bits (207), Expect = 4e-17
 Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 48/281 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +   ++G G +G+V L     +  +       A+K++   K     V  +   +L     
Sbjct: 40  QRVKKLGSGAYGEVLLCRDKVTHVER------AIKIIR--K---TSVSTSSNSKLL---E 85

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E          ++  L+          + M+ Y+G  G   D I  +   K    D    
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG--GELFDEIIHR--MKFNEVDAAVI 141

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSD-MA 210
             Q+  G++ LH   ++  +LKP NLLL    +   + + DFG     L     +   M 
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG-----LSAVFENQKKMK 196

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
            RLGT  Y+APE     +R     + D W  G  +  +L G  P+ G++ +EI     ++
Sbjct: 197 ERLGTAYYIAPEV----LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK--VE 250

Query: 271 KEKPCIPS----GLPPAVENVIIGCFEYDLRNRPLMADILH 307
           K K    S     +    +++I    ++D + R      L 
Sbjct: 251 KGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 83.6 bits (207), Expect = 4e-17
 Identities = 59/285 (20%), Positives = 105/285 (36%), Gaps = 47/285 (16%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM-----LLPLKEDCAKVFVNKFEEL 100
               ++G G +G+V L        +       A+K+         +       + KF E 
Sbjct: 39  FKVRKLGSGAYGEVLLCKEKNGHSEK------AIKVIKKSQFDKGRYSDDNKNIEKFHEE 92

Query: 101 FPKFRESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLP 149
              + E          ++  L  +        +  +FYEG  G   ++I  +   K    
Sbjct: 93  I--YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEG--GELFEQIINR--HKFDEC 146

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSD 206
           D      Q+  GI  LH   ++  ++KP N+LL   +    + + DFG+          D
Sbjct: 147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKD 202

Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM-EMLTGIQPWFGKSVEEIYH 265
             +  RLGT  Y+APE     ++   + + D W  G  IM  +L G  P+ G++ ++I  
Sbjct: 203 YKLRDRLGTAYYIAPEV----LKKKYNEKCDVWSCGV-IMYILLCGYPPFGGQNDQDIIK 257

Query: 266 SVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNRPLMADIL 306
              ++K K          +    + +I     YD   R    + L
Sbjct: 258 K--VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 81.1 bits (201), Expect = 6e-17
 Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 18/165 (10%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
           ++ G         Y  ++   +  LH  G++  +LKP N+LL+E   + + DFG      
Sbjct: 122 RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-----T 176

Query: 201 GRSLSDSDMALR----LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
            + LS      R    +GT  Y++PE    +   +      +D W  GC I +++ G+ P
Sbjct: 177 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPP 231

Query: 255 WFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
           +   +   I+    I K +   P    P   +++      D   R
Sbjct: 232 FRAGNEYLIFQK--IIKLEYDFPEKFFPKARDLVEKLLVLDATKR 274

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 81.6 bits (202), Expect = 7e-17
 Identities = 61/270 (22%), Positives = 100/270 (37%), Gaps = 44/270 (16%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL---------F 101
           +G G +G V+L       D    Y   A+K+L   K       V K +            
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLY---AMKVLK--KA----TIVQKAKTTEHTRTERQVL 112

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAK 160
              R+S  +  LH       K+ + + +  G  G+      +  +    ++  Y  ++  
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYING--GELFTHLSQRERFTEHEVQIYVGEIVL 170

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL------- 213
            +  LH +G++  ++K  N+LL  +  +VL DFG         LS   +A          
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG---------LSKEFVADETERAYDFC 221

Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVI 269
           GT  YMAP+       G      D W  G  + E+LTG  P+       S  EI     I
Sbjct: 222 GTIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR--I 278

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            K +P  P  +    +++I      D + R
Sbjct: 279 LKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 81.2 bits (201), Expect = 7e-17
 Identities = 64/325 (19%), Positives = 119/325 (36%), Gaps = 71/325 (21%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLAT-HHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           W      L L   +G G FG V +A       D   E   +AVKM   LK+D  +  ++ 
Sbjct: 30  WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM---LKDDATEKDLSD 86

Query: 97  FE---ELFPKFRESQSVCWLHGISVINGKICIAMKF---------------YEGSVGDRI 138
                E+     + +++  L G    +G + + +++                       I
Sbjct: 87  LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146

Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL 198
            +    ++   D++    QLA+G+  L S   +  +L   N+L++E++ + + DFG    
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG---- 202

Query: 199 LLGRSLSDSDMALRLGTPNY------------MAPEQWEPEVRGPISF-------ETDTW 239
            L R +++ D         Y            MAPE          +        ++D W
Sbjct: 203 -LARDINNID--------YYKKTTNGRLPVKWMAPE----------ALFDRVYTHQSDVW 243

Query: 240 GFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRN 298
            FG  + E+ T G  P+ G  VEE++  +         P+     +  ++  C+      
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQ 302

Query: 299 RPLMADILHAFE----SSQNAVYND 319
           RP    ++   +     + N  Y D
Sbjct: 303 RPTFKQLVEDLDRILTLTTNEEYLD 327

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 80.8 bits (200), Expect = 7e-17
 Identities = 59/294 (20%), Positives = 104/294 (35%), Gaps = 51/294 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML---------------LPLKEDCA 90
            LK  IG+G +G V LA +             A+K+L                P     A
Sbjct: 16  TLKDEIGKGSYGVVKLAYNENDN------TYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69

Query: 91  KVFVNKFEELFPK-FRESQ--------SVCWLHGISVI----NGKICIAMKFYE-GSVGD 136
                +      + ++E          +V  L    V+       + +  +    G V +
Sbjct: 70  PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLV--EVLDDPNEDHLYMVFELVNQGPVME 127

Query: 137 RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP 196
                    L       Y   L KGI  LH   ++  ++KPSNLL+ E   + + DFG  
Sbjct: 128 VPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG-- 182

Query: 197 YLLLGRSLSDSDMALRL--GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
              +      SD  L    GTP +MAPE      +       D W  G ++   + G  P
Sbjct: 183 ---VSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239

Query: 255 WFGKSVEEIYHSVVIKKEKPCIPS--GLPPAVENVIIGCFEYDLRNRPLMADIL 306
           +  + +  ++    IK +    P    +   ++++I    + +  +R ++ +I 
Sbjct: 240 FMDERIMCLHSK--IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIK 291

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 81.6 bits (202), Expect = 7e-17
 Identities = 61/305 (20%), Positives = 109/305 (35%), Gaps = 53/305 (17%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL-AVKMLLPLKEDCAKVFVNK 96
           W +    L L   +G G FG V LA       D        AVKM   LK D  +  ++ 
Sbjct: 64  WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSD 120

Query: 97  FE---ELFPKFRESQSVCWLHGISVINGKICIAMKF---------------YEGSVGDRI 138
                E+     + +++  L G    +G + + +++                        
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 180

Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL 198
           +     +L   D++    Q+A+G+  L S   +  +L   N+L++E + + + DFG    
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG---- 236

Query: 199 LLGRSLSDSDMALRLGTPNY------------MAPEQWEPEVRGPISFETDTWGFGCSIM 246
            L R +   D         Y            MAPE          + ++D W FG  + 
Sbjct: 237 -LARDIHHID--------YYKKTTNGRLPVKWMAPEAL---FDRIYTHQSDVWSFGVLLW 284

Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
           E+ T G  P+ G  VEE++  +         PS     +  ++  C+      RP    +
Sbjct: 285 EIFTLGGSPYPGVPVEELFKLLKEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQL 343

Query: 306 LHAFE 310
           +   +
Sbjct: 344 VEDLD 348

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 80.7 bits (200), Expect = 9e-17
 Identities = 48/238 (20%), Positives = 86/238 (36%), Gaps = 46/238 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +GRG FG V       S   +        K +     D   V            +
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTY------MAKFVKVKGTDQVLVK-----------K 50

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E          ++  LH       ++ +  +F  G      +RI      +L   +I+ Y
Sbjct: 51  EISILNIARHRNILHLHESFESMEELVMIFEFISG--LDIFERINT-SAFELNEREIVSY 107

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLS--EHDQLVLGDFGIPYLLLGRSLSDSD-MAL 211
             Q+ + +  LHS  +   +++P N++        + + +FG       R L   D   L
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG-----QARQLKPGDNFRL 162

Query: 212 RLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               P Y A     PEV     +S  TD W  G  +  +L+GI P+  ++ ++I  ++
Sbjct: 163 LFTAPEYYA-----PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 80.3 bits (199), Expect = 9e-17
 Identities = 59/308 (19%), Positives = 116/308 (37%), Gaps = 50/308 (16%)

Query: 37  RPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
           +   I  ++++    +G   FG V+       A   ++   +A+K    LK+        
Sbjct: 2   KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPG-EQTQAVAIKT---LKDKAEGPLRE 57

Query: 96  KFE---ELFPKFRESQSVCWLHGISVINGKICIAMKF---------------YEGSVGDR 137
           +F     L  + +    VC L G+   +  + +   +               +       
Sbjct: 58  EFRHEAMLRARLQHPNVVC-LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116

Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
             +     L  PD +    Q+A G+  L S  ++  +L   N+L+ +   + + D G   
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG--- 173

Query: 198 LLLGRSLSDSDMALRLGTPN-----YMAPEQWEPEVRGPISF-----ETDTWGFGCSIME 247
             L R +  +D   +L   +     +MAPE         I +     ++D W +G  + E
Sbjct: 174 --LFREVYAAD-YYKLLGNSLLPIRWMAPEA--------IMYGKFSIDSDIWSYGVVLWE 222

Query: 248 MLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           + + G+QP+ G S +++   +  ++  PC P   P  V  ++I C+      RP   DI 
Sbjct: 223 VFSYGLQPYCGYSNQDVVEMIRNRQVLPC-PDDCPAWVYALMIECWNEFPSRRPRFKDIH 281

Query: 307 HAFESSQN 314
               +  N
Sbjct: 282 SRLRAWGN 289

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 81.0 bits (200), Expect = 1e-16
 Identities = 54/319 (16%), Positives = 105/319 (32%), Gaps = 76/319 (23%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            LK  IG+G +G V +A  +Q+          A+K++     +  K+     +++     
Sbjct: 29  HLKGAIGQGSYGVVRVAIENQTR------AIRAIKIM-----NKNKIRQINPKDVERIKT 77

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLP----- 149
           E +        ++  L+ +      IC+ M+   G  G   D++                
Sbjct: 78  EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHG--GHLLDKL-NVFIDDSTGKCAMDV 134

Query: 150 ----------------------------------DILRYGIQLAKGISDLHSIGLLVLNL 175
                                              I     Q+   +  LH+ G+   ++
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDI 194

Query: 176 KPSNLLLS--EHDQLVLGDFGI-PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPI 232
           KP N L S  +  ++ L DFG+        +     M  + GTP ++APE          
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE-SY 253

Query: 233 SFETDTWGFGCSIM-EMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENV 287
             + D W  G  ++  +L G  P+ G +  +      +  +K C  +     L P   ++
Sbjct: 254 GPKCDAWSAGV-LLHLLLMGAVPFPGVNDADTISQ--VLNKKLCFENPNYNVLSPLARDL 310

Query: 288 IIGCFEYDLRNRPLMADIL 306
           +      ++  R      L
Sbjct: 311 LSNLLNRNVDERFDAMRAL 329

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 42/240 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G F  V       +        E A K +   ++  A       EE+    R
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTG------LEYAAKFI-KKRQSRASRRGVSREEIE---R 64

Query: 106 ESQSVCWLHGISVIN--------GKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E   +  +   +VI           + + ++   G  G   D +AQ+    L   +   +
Sbjct: 65  EVSILRQVLHHNVITLHDVYENRTDVVLILELVSG--GELFDFLAQK--ESLSEEEATSF 120

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLGDFGIPYLLLGRSLSDSD-M 209
             Q+  G++ LH+  +   +LKP N++L + +     + L DFG     L   + D    
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----LAHEIEDGVEF 175

Query: 210 ALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               GTP ++A     PE+    P+  E D W  G     +L+G  P+ G + +E   ++
Sbjct: 176 KNIFGTPEFVA-----PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 68/303 (22%), Positives = 117/303 (38%), Gaps = 54/303 (17%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
           I    + LK  +G G FG V+LA  +  +    +   +AVK    LK+         F+ 
Sbjct: 12  IKRRDIVLKRELGEGAFGKVFLAECYNLSPT-KDKMLVAVKA---LKDPTLAA-RKDFQR 66

Query: 99  --ELFPKFRESQSVCWLHGISVINGKICIAMKF---------------YEGSVGDRIAQQ 141
             EL    +    V   +G+      + +  ++                   + D   +Q
Sbjct: 67  EAELLTNLQHEHIVK-FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG 201
             G+L L  +L    Q+A G+  L S   +  +L   N L+  +  + +GDFG     + 
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG-----MS 180

Query: 202 RSLSDSDMALRLGTPN-----YMAPEQWEPEVRGPISF-------ETDTWGFGCSIMEML 249
           R +  +D   R+G        +M PE          S        E+D W FG  + E+ 
Sbjct: 181 RDVYSTD-YYRVGGHTMLPIRWMPPE----------SIMYRKFTTESDVWSFGVILWEIF 229

Query: 250 T-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHA 308
           T G QPWF  S  E+   +   +     P   P  V +V++GC++ + + R  + +I   
Sbjct: 230 TYGKQPWFQLSNTEVIECITQGRVLER-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKI 288

Query: 309 FES 311
             +
Sbjct: 289 LHA 291

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 58/306 (18%), Positives = 114/306 (37%), Gaps = 45/306 (14%)

Query: 33  PTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
                P       LK    +G G FG V L  +  + D   E   +AVK    LK D   
Sbjct: 20  QGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKA---LKADAGP 74

Query: 92  VFVNKFE---ELFPKFRESQSVCWLHGISVINGK--ICIAMKFYE-GSVGDRIAQQRGGK 145
              + ++   ++       + +    G     G   + + M++   GS+ D +       
Sbjct: 75  QHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHS 130

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS 205
           + L  +L +  Q+ +G++ LH+   +  +L   N+LL     + +GDFG     L +++ 
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG-----LAKAVP 185

Query: 206 DSDMALRLGTPN-----YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT---------- 250
           +     R+         + APE  +        + +D W FG ++ E+LT          
Sbjct: 186 EGHEYYRVREDGDSPVFWYAPECLK---EYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242

Query: 251 -----GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
                        +V  +   +   +  P  P   P  V +++  C+E +   RP   ++
Sbjct: 243 KFLELIGIAQGQMTVLRLTELLERGERLPR-PDKCPAEVYHLMKNCWETEASFRPTFENL 301

Query: 306 LHAFES 311
           +   ++
Sbjct: 302 IPILKT 307

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 80.9 bits (200), Expect = 2e-16
 Identities = 62/301 (20%), Positives = 111/301 (36%), Gaps = 46/301 (15%)

Query: 20  EGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
             + +          +    +      L   IGRG +  V L    ++   +      A+
Sbjct: 29  GIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIY------AM 82

Query: 80  KMLLPLKEDCAKVFVNKFEEL---------FPKFRESQSVCWLHGISVINGKICIAMKFY 130
           +++        K  VN  E++         F +      +  LH       ++   +++ 
Sbjct: 83  RVV-------KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135

Query: 131 EGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV 189
            G  GD +   QR  KLP      Y  +++  ++ LH  G++  +LK  N+LL     + 
Sbjct: 136 NG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK 193

Query: 190 LGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIME 247
           L D+G    +    L   D      GTPNY+APE     +RG    F  D W  G  + E
Sbjct: 194 LTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEI----LRGEDYGFSVDWWALGVLMFE 245

Query: 248 MLTGIQPWF---------GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRN 298
           M+ G  P+            + + ++    I +++  IP  L     +V+      D + 
Sbjct: 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQV--ILEKQIRIPRSLSVKAASVLKSFLNKDPKE 303

Query: 299 R 299
           R
Sbjct: 304 R 304

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 79.6 bits (197), Expect = 2e-16
 Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 44/276 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-FRESQS 109
           +G G +G V      ++          AVK+L        K  + +         +E Q 
Sbjct: 13  LGEGSYGKVKEVLDSETL------CRRAVKIL-------KKKKLRRIPNGEANVKKEIQL 59

Query: 110 --------VCWLHGISVING----KICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
                   V  L    V+      K+ + M++    +    D + +    + P+     Y
Sbjct: 60  LRRLRHKNVIQLV--DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE---KRFPVCQAHGY 114

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             QL  G+  LHS G++  ++KP NLLL+    L +   G+   L   + +D       G
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA-ADDTCRTSQG 173

Query: 215 TPNYMAPEQWEPEVRGPISF---ETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
           +P +  PE       G  +F   + D W  G ++  + TG+ P+ G ++ +++ +  I K
Sbjct: 174 SPAFQPPEI----ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN--IGK 227

Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
               IP    P + +++ G  EY+   R  +  I  
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 79.7 bits (197), Expect = 2e-16
 Identities = 63/292 (21%), Positives = 119/292 (40%), Gaps = 46/292 (15%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  + +L   +G G +G V+   H ++          A+K++  +  D  +    +   
Sbjct: 21  DPAGIFELVELVGNGTYGQVYKGRHVKTG------QLAAIKVM-DVTGDEEEEIKQEINM 73

Query: 100 LFPKFRESQSV-----CWLHG-ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDI- 151
           L  K+   +++      ++      ++ ++ + M+F   GSV D I   +G  L    I 
Sbjct: 74  L-KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132

Query: 152 --LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
              R   ++ +G+S LH   ++  ++K  N+LL+E+ ++ L DFG+   L      D  +
Sbjct: 133 YICR---EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL------DRTV 183

Query: 210 ALR---LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
             R   +GTP +MAPE    +        F++D W  G + +EM  G  P          
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD------M 237

Query: 265 HSV----VIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           H +    +I +               ++ I  C   +   RP    ++ H F
Sbjct: 238 HPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 46/270 (17%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL---------F 101
           IGRG +  V L    ++   +      A+K++        K  VN  E++         F
Sbjct: 17  IGRGSYAKVLLVRLKKTDRIY------AMKVV-------KKELVNDDEDIDWVQTEKHVF 63

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAK 160
            +      +  LH       ++   +++  G  GD +   QR  KLP      Y  +++ 
Sbjct: 64  EQASNHPFLVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISL 121

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYM 219
            ++ LH  G++  +LK  N+LL     + L D+G    +    L   D      GTPNY+
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFCGTPNYI 177

Query: 220 APEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWF---------GKSVEEIYHSVVI 269
           APE     +RG    F  D W  G  + EM+ G  P+            + + ++    I
Sbjct: 178 APEI----LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--I 231

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            +++  IP  L     +V+      D + R
Sbjct: 232 LEKQIRIPRSLSVKAASVLKSFLNKDPKER 261

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 79.7 bits (197), Expect = 2e-16
 Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 39/268 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS- 109
           IG+G F  V LA H  +        E+A+K++     D  ++     ++LF   RE +  
Sbjct: 23  IGKGNFAKVKLARHILTG------REVAIKII-----DKTQLNPTSLQKLF---REVRIM 68

Query: 110 -------VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
                  +  L  +      + + M++   G V D +     G++   +      Q+   
Sbjct: 69  KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSA 126

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL--GTPNYM 219
           +   H   ++  +LK  NLLL     + + DFG          +     L    G P Y 
Sbjct: 127 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFG-----FSNEFTVGGK-LDAFCGAPPYA 180

Query: 220 APEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           APE ++  +  GP   E D W  G  +  +++G  P+ G++++E+     + + K  IP 
Sbjct: 181 APELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRER--VLRGKYRIPF 235

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADIL 306
            +    EN++      +   R  +  I+
Sbjct: 236 YMSTDCENLLKRFLVLNPIKRGTLEQIM 263

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 81.4 bits (201), Expect = 2e-16
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 41/236 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G FG V   T   + ++F      A K +            +  E +    +
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNF------AAKFV-------MTPHESDKETVR---K 203

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E Q        ++  LH     + ++ +  +F  G  G   +++A +   K+   + + Y
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG--GELFEKVADEHN-KMSEDEAVEY 260

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLS--EHDQLVLGDFGIPYLLLGRSLSDSD-MAL 211
             Q+ KG+  +H    + L+LKP N++ +    ++L L DFG     L   L     + +
Sbjct: 261 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG-----LTAHLDPKQSVKV 315

Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
             GT  + APE  E +   P+ + TD W  G     +L+G+ P+ G++ +E   +V
Sbjct: 316 TTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 79.8 bits (197), Expect = 3e-16
 Identities = 58/281 (20%), Positives = 108/281 (38%), Gaps = 25/281 (8%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
                +     IGRG FG V+  T   +     +    AVK    L        V++F  
Sbjct: 86  PSSLIVHFNEVIGRGHFGCVYHGTLLDND---GKKIHCAVKS---LNRITDIGEVSQFLT 139

Query: 99  --ELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIA--QQRGGKLPLPDILR 153
              +   F    +V  L GI + + G   + + + +   GD     +       + D++ 
Sbjct: 140 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKH--GDLRNFIRNETHNPTVKDLIG 196

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           +G+Q+AKG+  L S   +  +L   N +L E   + + DFG     L R + D +     
Sbjct: 197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVH 251

Query: 214 GTPNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI 269
                  P +W   E       + ++D W FG  + E++T G  P+   +  +I   ++ 
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
            +     P   P  +  V++ C+      RP  ++++    
Sbjct: 312 GRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 78.4 bits (194), Expect = 3e-16
 Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 40/283 (14%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNK 96
           W ++   LKL   IG+G FGDV L  +          +++AVK    +K D  A+ F+  
Sbjct: 16  WALNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKC---IKNDATAQAFLA- 63

Query: 97  FE-ELFPKFRESQSVCWLHGI-SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
            E  +  + R S  V  L G+     G + I  ++   GS+ D +  +    L    +L+
Sbjct: 64  -EASVMTQLRHSNLVQ-LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           + + + + +  L     +  +L   N+L+SE +   + DFG     L +  S +    +L
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKL 176

Query: 214 GTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKK 271
             P  + APE          S ++D W FG  + E+ + G  P+    ++++   V    
Sbjct: 177 --PVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV---- 227

Query: 272 EK----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           EK       P G PPAV  V+  C+  D   RP    +    E
Sbjct: 228 EKGYKMDA-PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 79.7 bits (197), Expect = 4e-16
 Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 61/248 (24%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN-------- 95
           ++     +G G FG V       +        +LA K++        +   N        
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATG------LKLAAKIIKTRGMKDKEEVKNEISVMNQL 143

Query: 96  ------KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKL 146
                 +  + F    ES++             I + M++ +G  G   DRI       L
Sbjct: 144 DHANLIQLYDAF----ESKN------------DIVLVMEYVDG--GELFDRIID-ESYNL 184

Query: 147 PLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD--QLVLGDFGIPYLLLGRSL 204
              D + +  Q+ +GI  +H + +L L+LKP N+L    D  Q+ + DFG     L R  
Sbjct: 185 TELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG-----LARRY 239

Query: 205 SDSD-MALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFG--CSIMEMLTGIQPWFGKS 259
              + + +  GTP ++A     PEV     +SF TD W  G    +  +L+G+ P+ G +
Sbjct: 240 KPREKLKVNFGTPEFLA-----PEVVNYDFVSFPTDMWSVGVIAYM--LLSGLSPFLGDN 292

Query: 260 VEEIYHSV 267
             E  +++
Sbjct: 293 DAETLNNI 300

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 79.4 bits (196), Expect = 5e-16
 Identities = 47/238 (19%), Positives = 88/238 (36%), Gaps = 45/238 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G FG V       +            K +          +      +     
Sbjct: 54  DILEELGSGAFGVVHRCVEKATG------RVFVAKFI-------NTPYPLDKYTVK---N 97

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E           +  LH       ++ + ++F  G  G   DRIA     K+   +++ Y
Sbjct: 98  EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG--GELFDRIAA-EDYKMSEAEVINY 154

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLS--EHDQLVLGDFGIPYLLLGRSLSDSD-MAL 211
             Q  +G+  +H   ++ L++KP N++    +   + + DFG     L   L+  + + +
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG-----LATKLNPDEIVKV 209

Query: 212 RLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
              T  + A     PE+  R P+ F TD W  G     +L+G+ P+ G+   E   +V
Sbjct: 210 TTATAEFAA-----PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 79.3 bits (196), Expect = 7e-16
 Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 41/283 (14%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
           ++   LKL   IG+G FGDV L  +          +++AVK    +K D  A+ F+ +  
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKC---IKNDATAQAFLAEAS 238

Query: 99  ELFPKFRESQSVCWLHGI-SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
            +  + R S  V  L G+     G + I  ++   GS+ D +  +    L    +L++ +
Sbjct: 239 VM-TQLRHSNLVQ-LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 296

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
            + + +  L     +  +L   N+L+SE +   + DFG     L +  S +    +L   
Sbjct: 297 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKL--- 348

Query: 217 NYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
               P +W  PE       S ++D W FG  + E+ + G  P+    ++++   V    E
Sbjct: 349 ----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV----E 400

Query: 273 K----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           K       P G PPAV +V+  C+  D   RP    +    E 
Sbjct: 401 KGYKMDA-PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 78.5 bits (194), Expect = 7e-16
 Identities = 69/308 (22%), Positives = 112/308 (36%), Gaps = 48/308 (15%)

Query: 7   AHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQ 66
           A K +     + F         +    T ++             +G G FG V L  H +
Sbjct: 6   AKKGSEQESVKEFLAKAK-EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE 64

Query: 67  SADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL--------------FPKFRESQSVCW 112
           S + +      A+K+L        K  V K +++              FP F     +  
Sbjct: 65  SGNHY------AMKIL-------DKQKVVKLKQIEHTLNEKRILQAVNFP-F-----LVK 105

Query: 113 LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIGLL 171
           L      N  + + M++  G  G+  +  +R G+   P    Y  Q+      LHS+ L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163

Query: 172 VLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP 231
             +LKP NLL+ +   + + DFG       + +      L  GTP  +APE         
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFG-----FAKRVKGRTWTLC-GTPEALAPEIIL---SKG 214

Query: 232 ISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGC 291
            +   D W  G  I EM  G  P+F     +IY    I   K   PS     +++++   
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK--IVSGKVRFPSHFSSDLKDLLRNL 272

Query: 292 FEYDLRNR 299
            + DL  R
Sbjct: 273 LQVDLTKR 280

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 77.2 bits (191), Expect = 7e-16
 Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 42/240 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           ++   +G G F  V       +  ++      A K +   +   ++  V++ EE+    R
Sbjct: 8   EMGEELGSGQFAIVRKCRQKGTGKEY------AAKFIKKRRLSSSRRGVSR-EEIE---R 57

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E          ++  LH I      + + ++   G  G   D +A++    L   +  ++
Sbjct: 58  EVNILREIRHPNIITLHDIFENKTDVVLILELVSG--GELFDFLAEK--ESLTEDEATQF 113

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLGDFGIPYLLLGRSLSDSD-M 209
             Q+  G+  LHS  +   +LKP N++L + +    ++ L DFG     +   +   +  
Sbjct: 114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-----IAHKIEAGNEF 168

Query: 210 ALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               GTP ++A     PE+    P+  E D W  G     +L+G  P+ G++ +E   ++
Sbjct: 169 KNIFGTPEFVA-----PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 223

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 79.3 bits (196), Expect = 8e-16
 Identities = 59/282 (20%), Positives = 106/282 (37%), Gaps = 50/282 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G+G FG+V       +  ++      AVK++   K        +         R
Sbjct: 25  NIVCMLGKGSFGEVLKCKDRITQQEY------AVKVI--NKASAKNKDTSTIL------R 70

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E +        ++  L  I   +    I  + Y G  G   D I ++   +    D  R 
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG--GELFDEIIKR--KRFSEHDAARI 126

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSD-MA 210
             Q+  GI+ +H   ++  +LKP N+LL    +   + + DFG     L      +  M 
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG-----LSTCFQQNTKMK 181

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM-EMLTGIQPWFGKSVEEIYHSVVI 269
            R+GT  Y+APE     +RG    + D W  G  I+  +L+G  P++GK+  +I     +
Sbjct: 182 DRIGTAYYIAPEV----LRGTYDEKCDVWSAGV-ILYILLSGTPPFYGKNEYDILKR--V 234

Query: 270 KKEKPCIPS----GLPPAVENVIIGCFEYDLRNRPLMADILH 307
           +  K          +    +++I     +    R      L 
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 79.6 bits (196), Expect = 1e-15
 Identities = 59/323 (18%), Positives = 117/323 (36%), Gaps = 45/323 (13%)

Query: 4   QIRAHKPAASFEYELFEGDPDHLRTVVATPTQTRPWIDPTSLKL-KHRIGRGPFGDVWLA 62
                 P  +  +E    DP+ L+         + ++   +L +    +G G FG V   
Sbjct: 303 DKPRPMPMDTSVFESPFSDPEELK-------DKKLFLKRDNLLIADIELGCGNFGSVRQG 355

Query: 63  THHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE---LFPKFRESQSVCWLHGISVI 119
            +        +  ++A+K+   LK+   K    +      +  +      +  L G+   
Sbjct: 356 VYRMR----KKQIDVAIKV---LKQGTEKADTEEMMREAQIMHQLDN-PYIVRLIGV-CQ 406

Query: 120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS 178
              + + M+    G +   +   +  ++P+ ++     Q++ G+  L     +  NL   
Sbjct: 407 AEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAAR 465

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA------PEQW-EPEV--R 229
           N+LL       + DFG     L ++L   D         Y A      P +W  PE    
Sbjct: 466 NVLLVNRHYAKISDFG-----LSKALGADDSY-------YTARSAGKWPLKWYAPECINF 513

Query: 230 GPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVI 288
              S  +D W +G ++ E L+ G +P+      E+   +   K   C P   PP +  ++
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC-PPECPPELYALM 572

Query: 289 IGCFEYDLRNRPLMADILHAFES 311
             C+ Y   +RP    +     +
Sbjct: 573 SDCWIYKWEDRPDFLTVEQRMRA 595

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 77.8 bits (192), Expect = 1e-15
 Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 42/240 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G F  V       +        E A K +   ++  A       EE+    R
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTG------LEYAAKFI-KKRQSRASRRGVCREEIE---R 64

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E          ++  LH +      + + ++   G  G   D +AQ+    L   +   +
Sbjct: 65  EVSILRQVLHPNIITLHDVYENRTDVVLILELVSG--GELFDFLAQK--ESLSEEEATSF 120

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLGDFGIPYLLLGRSLSDSD-M 209
             Q+  G++ LH+  +   +LKP N++L + +     + L DFG     L   + D    
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----LAHEIEDGVEF 175

Query: 210 ALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               GTP ++A     PE+    P+  E D W  G     +L+G  P+ G + +E   ++
Sbjct: 176 KNIFGTPEFVA-----PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 77.3 bits (191), Expect = 1e-15
 Identities = 60/268 (22%), Positives = 116/268 (43%), Gaps = 39/268 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-FRESQ- 108
           +G G FG V LATH+++        ++A+K +       ++  + K  ++  +  RE   
Sbjct: 17  LGEGSFGKVKLATHYKTQ------QKVALKFI-------SRQLLKK-SDMHMRVEREISY 62

Query: 109 -------SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
                   +  L+ +      I + +++  G + D I ++   ++   +  R+  Q+   
Sbjct: 63  LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICA 120

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL--GTPNYM 219
           I   H   ++  +LKP NLLL ++  + + DFG     L   ++D +  L+   G+PNY 
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG-----LSNIMTDGNF-LKTSCGSPNYA 174

Query: 220 APEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           APE    ++  GP   E D W  G  +  ML G  P+  + +  ++    +      +P 
Sbjct: 175 APEVINGKLYAGP---EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK--VNSCVYVMPD 229

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADIL 306
            L P  +++I      D   R  + +I 
Sbjct: 230 FLSPGAQSLIRRMIVADPMQRITIQEIR 257

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 46/242 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELFPK 103
                +G G F  V       +        + A K +     K     V     E     
Sbjct: 14  DTGEELGSGQFAVVKKCREKSTG------LQYAAKFIKKRRTKSSRRGVSREDIE----- 62

Query: 104 FRESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDIL 152
            RE          +V  LH +      + + ++   G  G   D +A++    L   +  
Sbjct: 63  -REVSILKEIQHPNVITLHEVYENKTDVILILELVAG--GELFDFLAEK--ESLTEEEAT 117

Query: 153 RYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLGDFGIPYLLLGRSLSDSD 208
            +  Q+  G+  LHS+ +   +LKP N++L + +    ++ + DFG     L   +   +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG-----LAHKIDFGN 172

Query: 209 -MALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH 265
                 GTP ++A     PE+    P+  E D W  G     +L+G  P+ G + +E   
Sbjct: 173 EFKNIFGTPEFVA-----PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227

Query: 266 SV 267
           +V
Sbjct: 228 NV 229

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 76.4 bits (189), Expect = 3e-15
 Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 37/272 (13%)

Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-----LPLKE-DCAK 91
           P       ++   +G G FG V L     +   +      A+K+L     + LK+ +   
Sbjct: 1   PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYY------AMKVLKKEIVVRLKQVEHTN 54

Query: 92  VFVNKFEEL-FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLP 149
                   +  P F     +  + G      +I + M + EG  G+  +  ++  + P P
Sbjct: 55  DERLMLSIVTHP-F-----IIRMWGTFQDAQQIFMIMDYIEG--GELFSLLRKSQRFPNP 106

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
               Y  ++   +  LHS  ++  +LKP N+LL ++  + + DFG       + + D   
Sbjct: 107 VAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG-----FAKYVPDVTY 161

Query: 210 ALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
            L  GTP+Y+APE     V    P +   D W FG  I EML G  P++  +  + Y   
Sbjct: 162 TLC-GTPDYIAPE-----VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK- 214

Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
            I   +   P      V++++      DL  R
Sbjct: 215 -ILNAELRFPPFFNEDVKDLLSRLITRDLSQR 245

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 76.3 bits (188), Expect = 3e-15
 Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 22/221 (9%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK-MLLPLKEDCAKVFVNKFE 98
           DP  L      IG G FG V+ A   ++++       +A+K M    K+   K      E
Sbjct: 51  DPEKLFSDLREIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKE 104

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDI---LRYG 155
             F +     +     G  +      + M++  GS  D + +     L   +I       
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD-LLEVHKKPLQEVEIAAVTH-- 161

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
               +G++ LHS  ++  ++K  N+LLSE   + LGDFG   ++   +         +GT
Sbjct: 162 -GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF-------VGT 213

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
           P +MAPE       G    + D W  G + +E+     P F
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 75.4 bits (186), Expect = 4e-15
 Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 40/282 (14%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  L     +IG+G FG+V+    +++         +A+K++  L+E   ++   + E 
Sbjct: 19  DPEELFTKLEKIGKGSFGEVFKGIDNRTQ------KVVAIKII-DLEEAEDEIEDIQQEI 71

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDI---LRYG 155
                 +S  V   +G  + + K+ I M++   GS  D +     G L    I   LR  
Sbjct: 72  TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR-- 126

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
            ++ KG+  LHS   +  ++K +N+LLSEH ++ L DFG+   L    +  +      GT
Sbjct: 127 -EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GT 182

Query: 216 PNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV-----V 268
           P +MA     PEV  +     + D W  G + +E+  G  P          H +     +
Sbjct: 183 PFWMA-----PEVIKQSAYDSKADIWSLGITAIELARGEPPHSE------LHPMKVLFLI 231

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            K   P +       ++  +  C   +   RP   ++L H F
Sbjct: 232 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 75.8 bits (187), Expect = 4e-15
 Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 34/230 (14%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELFPKFRESQ 108
           +GRG F  V       +        E A K L      +DC    +++   L    +   
Sbjct: 37  LGRGKFAVVRQCISKSTG------QEYAAKFLKKRRRGQDCRAEILHEIAVL-ELAKSCP 89

Query: 109 SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
            V  LH +     +I + +++  G  G        +    +   D++R   Q+ +G+  L
Sbjct: 90  RVINLHEVYENTSEIILILEYAAG--GEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL 147

Query: 166 HSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAP 221
           H   ++ L+LKP N+LL        + + DFG     + R +  +  +   +GTP Y+A 
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG-----MSRKIGHACELREIMGTPEYLA- 201

Query: 222 EQWEPEV--RGPISFETDTWGFG--CSIMEMLTGIQPWFGKSVEEIYHSV 267
               PE+    PI+  TD W  G    +  +LT   P+ G+  +E Y ++
Sbjct: 202 ----PEILNYDPITTATDMWNIGIIAYM--LLTHTSPFVGEDNQETYLNI 245

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 75.8 bits (187), Expect = 5e-15
 Identities = 70/312 (22%), Positives = 116/312 (37%), Gaps = 55/312 (17%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE- 98
           I    + LK  +G G FG V+LA  H    +  +   +AVK    LKE         F+ 
Sbjct: 38  IKRRDIVLKWELGEGAFGKVFLAECHNLLPE-QDKMLVAVKA---LKEASESA-RQDFQR 92

Query: 99  --ELFPKFRESQSVCWLHGISVINGKICIAMKF--------------YEGSVGDRIAQQR 142
             EL    +    V    G+      + +  ++               +  +        
Sbjct: 93  EAELLTMLQHQHIVR-FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 151

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
            G L L  +L    Q+A G+  L  +  +  +L   N L+ +   + +GDFG     + R
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSR 206

Query: 203 SLSDSDMALRLGTPN-----YMAPEQWEPEVRGPISF-------ETDTWGFGCSIMEMLT 250
            +  +D   R+G        +M PE          S        E+D W FG  + E+ T
Sbjct: 207 DIYSTDYY-RVGGRTMLPIRWMPPE----------SILYRKFTTESDVWSFGVVLWEIFT 255

Query: 251 -GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
            G QPW+  S  E    +   +E    P   PP V  ++ GC++ + + R  + D+    
Sbjct: 256 YGKQPWYQLSNTEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314

Query: 310 ES--SQNAVYND 319
           ++      VY D
Sbjct: 315 QALAQAPPVYLD 326

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 75.0 bits (185), Expect = 7e-15
 Identities = 67/344 (19%), Positives = 117/344 (34%), Gaps = 59/344 (17%)

Query: 25  HLRTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
           H       P  T    +D   +K +  IG G FG V  A             + A+K   
Sbjct: 6   HHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKAR----IKKDGLRMDAAIKR-- 59

Query: 84  PLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGKICIAMKF----------- 129
            +KE  +K     F    E+  K     ++  L G     G + +A+++           
Sbjct: 60  -MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 118

Query: 130 ----YEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH 185
                E      IA      L    +L +   +A+G+  L     +  +L   N+L+ E+
Sbjct: 119 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 178

Query: 186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGT---P-NYMAPEQWEPEVRGPISF------- 234
               + DFG     L R     ++ ++      P  +MA E          S        
Sbjct: 179 YVAKIADFG-----LSR---GQEVYVKKTMGRLPVRWMAIE----------SLNYSVYTT 220

Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
            +D W +G  + E+++ G  P+ G +  E+Y  +         P      V +++  C+ 
Sbjct: 221 NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-PLNCDDEVYDLMRQCWR 279

Query: 294 YDLRNRPLMADILHAFES--SQNAVYNDGEWTGLGSRALTDTSS 335
                RP  A IL +      +   Y +       + A  D S+
Sbjct: 280 EKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGIDCSA 323

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 74.7 bits (184), Expect = 7e-15
 Identities = 63/281 (22%), Positives = 113/281 (40%), Gaps = 30/281 (10%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  + ++   +G G FG V+ A + ++          A K++    E+  + ++   E 
Sbjct: 16  DPNEVWEIVGELGDGAFGKVYKAKNKETGA------LAAAKVIETKSEEELEDYIV--EI 67

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
                 +   +  L G    +GK+ I ++F   G+V   I  +    L  P I     Q+
Sbjct: 68  EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQM 126

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGT 215
            + ++ LHS  ++  +LK  N+L++    + L DFG+             +  R   +GT
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN------LKTLQKRDSFIGT 180

Query: 216 PNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKE 272
           P +MAPE    E     P  ++ D W  G +++EM     P    + +  +     I K 
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKS 237

Query: 273 KP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            P     PS       + +    + +   RP  A +L H F
Sbjct: 238 DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 75.3 bits (185), Expect = 1e-14
 Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 25/233 (10%)

Query: 37  RPWIDPTSL-KLKHRIGRGP--FGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF 93
             ++      +L   IG+G      V LA +  +         + V+ +  L E C+   
Sbjct: 18  SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTG------EYVTVRRI-NL-EACSNEM 69

Query: 94  VNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
           V     E    K     ++       + + ++ +   F   GS  D I       +    
Sbjct: 70  VTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELA 129

Query: 151 I---LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG----RS 203
           I   L+    + K +  +H +G +  ++K S++L+S   ++ L        ++     + 
Sbjct: 130 IAYILQ---GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR 186

Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
           +        +    +++PE  +  ++G    ++D +  G +  E+  G  P+ 
Sbjct: 187 VVHDFPKYSVKVLPWLSPEVLQQNLQG-YDAKSDIYSVGITACELANGHVPFK 238

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 74.2 bits (183), Expect = 1e-14
 Identities = 66/307 (21%), Positives = 103/307 (33%), Gaps = 56/307 (18%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W      L     +G G FG V  AT +      D    +AVKM   LK           
Sbjct: 18  WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKM---LKPSAHLTEREAL 73

Query: 98  E---ELFPKFRESQSVCWLHGISVINGKICIAM-----------------KFYEGSVGDR 137
               ++        ++  L G   I G   +                    F        
Sbjct: 74  MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133

Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
           I +     L L D+L +  Q+AKG++ L S   +  +L   N+LL+      + DFG   
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG--- 190

Query: 198 LLLGRSLSDSDMALRLGTPNY------------MAPEQWEPEVRGPISFETDTWGFGCSI 245
             L R + +          NY            MAPE          +FE+D W +G  +
Sbjct: 191 --LARDIKNDS--------NYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGIFL 237

Query: 246 MEMLT-GIQPWFGKSV-EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA 303
            E+ + G  P+ G  V  + Y  +         P   P  + +++  C++ D   RP   
Sbjct: 238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS-PEHAPAEMYDIMKTCWDADPLKRPTFK 296

Query: 304 DILHAFE 310
            I+   E
Sbjct: 297 QIVQLIE 303

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 65/329 (19%), Positives = 120/329 (36%), Gaps = 62/329 (18%)

Query: 23  PDHLRTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM 81
           P + R  +    +         +++    IG G FG V+ A         + +  +AVKM
Sbjct: 26  PMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPY-EPFTMVAVKM 84

Query: 82  LLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGKICIAMKF--------- 129
              LKE+ +      F+    L  +F     V  L G+  +   +C+  ++         
Sbjct: 85  ---LKEEASADMQADFQREAALMAEFDNPNIVK-LLGVCAVGKPMCLLFEYMAYGDLNEF 140

Query: 130 --------------YEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNL 175
                          + S   R++      L   + L    Q+A G++ L     +  +L
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200

Query: 176 KPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY-----MAPEQWEPEVRG 230
              N L+ E+  + + DFG     L R++  +D   +    +      M PE        
Sbjct: 201 ATRNCLVGENMVVKIADFG-----LSRNIYSAD-YYKADGNDAIPIRWMPPE-------- 246

Query: 231 PISF-------ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
             S        E+D W +G  + E+ + G+QP++G + EE+ + V       C P   P 
Sbjct: 247 --SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC-PENCPL 303

Query: 283 AVENVIIGCFEYDLRNRPLMADILHAFES 311
            + N++  C+     +RP    I    + 
Sbjct: 304 ELYNLMRLCWSKLPADRPSFCSIHRILQR 332

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 60/246 (24%), Positives = 92/246 (37%), Gaps = 57/246 (23%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVF---------- 93
             K ++G G FGDV L     S        E  +K +     +    ++           
Sbjct: 25  IFKRKLGSGAFGDVHLVEERSSG------LERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78

Query: 94  ---VNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG---DRI--AQQRGGK 145
              + K  E+F    E                + I M+  EG  G   +RI  AQ RG  
Sbjct: 79  HPNIIKIFEVF----EDYH------------NMYIVMETCEG--GELLERIVSAQARGKA 120

Query: 146 LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGR 202
           L    +     Q+   ++  HS  ++  +LKP N+L    S H  + + DFG     L  
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG-----LAE 175

Query: 203 SLSDSD-MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE 261
                +      GT  YMAPE      +  ++F+ D W  G  +  +LTG  P+ G S+E
Sbjct: 176 LFKSDEHSTNAAGTALYMAPEV----FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE 231

Query: 262 EIYHSV 267
           E+    
Sbjct: 232 EVQQKA 237

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 73.5 bits (181), Expect = 2e-14
 Identities = 61/328 (18%), Positives = 111/328 (33%), Gaps = 56/328 (17%)

Query: 13  SFEYELFEGDPDHLRTVVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDF 71
           S  +          R       +     ID   L L   +G G FG V      Q     
Sbjct: 3   SSHHHHHHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDG-- 60

Query: 72  DEYHELAVKMLLPLKEDCAKVF-VNKFE---ELFPKFRESQSVCWLHGISVINGKIC--- 124
               ++AVK +   K D +    + +F         F     +  L G+ +         
Sbjct: 61  -TSLKVAVKTM---KLDNSSQREIEEFLSEAACMKDFSHPNVIR-LLGVCIEMSSQGIPK 115

Query: 125 --IAMKFYEGSVGD-------RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNL 175
             + + F +   GD          +     +PL  +L++ + +A G+  L +   L  +L
Sbjct: 116 PMVILPFMKY--GDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDL 173

Query: 176 KPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN-----YMAPEQWEPEVRG 230
              N +L +   + + DFG     L + +   D   R G        ++A E        
Sbjct: 174 AARNCMLRDDMTVCVADFG-----LSKKIYSGDYY-RQGRIAKMPVKWIAIE-------- 219

Query: 231 PISF-------ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
             S        ++D W FG ++ E+ T G+ P+ G    E+Y  ++        P     
Sbjct: 220 --SLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ-PEDCLD 276

Query: 283 AVENVIIGCFEYDLRNRPLMADILHAFE 310
            +  ++  C+  D  +RP  + +    E
Sbjct: 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLE 304

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 60/320 (18%), Positives = 115/320 (35%), Gaps = 76/320 (23%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W     +L L   +G G FG V  AT          Y  +AVKM   LKE+ +   +   
Sbjct: 18  WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKM---LKENASPSELRDL 73

Query: 98  E---ELFPKFRESQSVCWLHGISVINGKICIAMKF-----------------------YE 131
                +  +      +  L+G    +G + + +++                         
Sbjct: 74  LSEFNVLKQVNHPHVIK-LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132

Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG 191
                 +       L + D++ +  Q+++G+  L  + L+  +L   N+L++E  ++ + 
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192

Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNY------------MAPEQWEPEVRGPISF----- 234
           DFG     L R + + D        +Y            MA E          S      
Sbjct: 193 DFG-----LSRDVYEED--------SYVKRSQGRIPVKWMAIE----------SLFDHIY 229

Query: 235 --ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGC 291
             ++D W FG  + E++T G  P+ G   E +++ +         P      +  +++ C
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER-PDNCSEEMYRLMLQC 288

Query: 292 FEYDLRNRPLMADILHAFES 311
           ++ +   RP+ ADI    E 
Sbjct: 289 WKQEPDKRPVFADISKDLEK 308

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 72.6 bits (179), Expect = 3e-14
 Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-F 104
            L   +G G FG V +  H  +       H++AVK+L        +  +    ++  K  
Sbjct: 14  VLGDTLGVGTFGKVKIGEHQLTG------HKVAVKIL-------NRQKIRS-LDVVGKIK 59

Query: 105 RESQ--------SVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYG 155
           RE Q         +  L+ +        + M++   G + D I +   G++   +  R  
Sbjct: 60  REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLF 117

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-- 213
            Q+   +   H   ++  +LKP N+LL  H    + DFG     L   +SD +  LR   
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-----LSNMMSDGEF-LRTSC 171

Query: 214 GTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           G+PNY APE     +  GP   E D W  G  +  +L G  P+  + V  ++    I+  
Sbjct: 172 GSPNYAAPEVISGRLYAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKK--IRGG 226

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
              IP  L  +V  +++   + D   R  + DI 
Sbjct: 227 VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIR 260

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 73.5 bits (181), Expect = 3e-14
 Identities = 64/339 (18%), Positives = 119/339 (35%), Gaps = 56/339 (16%)

Query: 6   RAHKPAASFEYELFEGDPDHLRTVVATPTQTRP---W-IDPTSLKLKHRIGRGPFGDVWL 61
              KP     +++ E    +  T +  PTQ      W     +L+    +G G FG V  
Sbjct: 6   YKQKPKYQVRWKIIESYEGNSYTFI-DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64

Query: 62  ATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISV 118
           AT      + D   ++AVKM   LK               ++     + +++  L G   
Sbjct: 65  ATAFGLGKE-DAVLKVAVKM---LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120

Query: 119 INGKICIAMKFYEG-------------SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
             G + +  ++                   D             D+L +  Q+A+G++ L
Sbjct: 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL 180

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY------- 218
            S   +  ++   N+LL+      +GDFG     L R + +          NY       
Sbjct: 181 ASKNCIHRDVAARNVLLTNGHVAKIGDFG-----LARDIMNDS--------NYIVKGNAR 227

Query: 219 -----MAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFG-KSVEEIYHSVVIKK 271
                MAPE          + ++D W +G  + E+ + G+ P+ G     + Y  V    
Sbjct: 228 LPVKWMAPESI---FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284

Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           +    P+  P  + +++  C+  +  +RP    I    +
Sbjct: 285 QMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 72.4 bits (178), Expect = 4e-14
 Identities = 52/241 (21%), Positives = 89/241 (36%), Gaps = 29/241 (12%)

Query: 31  ATPTQTRPWIDPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
           +  +   PW       +L+  IG G    V  A             ++A+K +  L++  
Sbjct: 2   SEDSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRI-NLEKCQ 54

Query: 90  AKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPL 148
             +     E          ++   +   V+  ++ + MK    GSV D I          
Sbjct: 55  TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK 114

Query: 149 PDILRYGI------QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
             +L          ++ +G+  LH  G +  ++K  N+LL E   + + DFG+       
Sbjct: 115 SGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV-----SA 169

Query: 203 SLSDSDMALRL-------GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
            L+      R        GTP +MAPE  E        F+ D W FG + +E+ TG  P+
Sbjct: 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKADIWSFGITAIELATGAAPY 227

Query: 256 F 256
            
Sbjct: 228 H 228

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 72.1 bits (177), Expect = 4e-14
 Identities = 33/271 (12%), Positives = 63/271 (23%), Gaps = 64/271 (23%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
           L    G  P    W A              +A+  + P +       + +          
Sbjct: 35  LLIFHGGVPPLQFWQALDTALDRQ------VALTFVDP-QGVLPDDVLQETL------SR 81

Query: 107 SQSVCWL--------HGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQ 157
           +  +  +          +        +  ++  G S+ +               +R    
Sbjct: 82  TLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD----TSPSPVGAIRAMQS 137

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           LA      H  G+ +    PS + +S    +VL                           
Sbjct: 138 LAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA----------------------- 174

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV-IKKEKPCI 276
            M             + + D  G G S+  +L    P     V             +P  
Sbjct: 175 TMPDA----------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE 224

Query: 277 PS----GLPPAVENVIIGCFEYDLRNRPLMA 303
           P+     +P  +  V     + D   R    
Sbjct: 225 PADIDRDIPFQISAVAARSVQGDGGIRSAST 255

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 73.3 bits (180), Expect = 6e-14
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 42/270 (15%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-- 108
           +G G FG V +  H  +       H++AVK+L        +  +   + +    RE Q  
Sbjct: 24  LGVGTFGKVKVGKHELTG------HKVAVKIL-------NRQKIRSLDVVGKIRREIQNL 70

Query: 109 ------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQLA 159
                  +  L+ +      I + M++  G  G   D I +   G+L   +  R   Q+ 
Sbjct: 71  KLFRHPHIIKLYQVISTPSDIFMVMEYVSG--GELFDYICKN--GRLDEKESRRLFQQIL 126

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL--GTPN 217
            G+   H   ++  +LKP N+LL  H    + DFG     L   +SD +  LR   G+PN
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-----LSNMMSDGEF-LRTSCGSPN 180

Query: 218 YMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
           Y APE     +  GP   E D W  G  +  +L G  P+    V  ++    I       
Sbjct: 181 YAAPEVISGRLYAGP---EVDIWSSGVILYALLCGTLPFDDDHVPTLFKK--ICDGIFYT 235

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           P  L P+V +++    + D   R  + DI 
Sbjct: 236 PQYLNPSVISLLKHMLQVDPMKRATIKDIR 265

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 73.2 bits (180), Expect = 6e-14
 Identities = 69/272 (25%), Positives = 95/272 (34%), Gaps = 73/272 (26%)

Query: 20  EGDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
           + D   + TVVATP Q        S      IG G FG V+ A    S +        A+
Sbjct: 31  DKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELV------AI 84

Query: 80  KMLLPLKEDCAKVFVNKFEELFPKFRESQS---------VCWLHGISVINGK-----ICI 125
           K          KV  +K  +     RE Q          V   +       K     + +
Sbjct: 85  K----------KVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130

Query: 126 AMKFYEGSVGDRIAQQRGGKLPLPDIL--RYGIQLAKGISDLHSIGLLVLNLKPSNLLL- 182
            + +   +V          K  LP I    Y  QL + ++ +HS G+   ++KP NLLL 
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD 190

Query: 183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN--------YMAPE------QWEPEV 228
            +   L L DFG       + L         G PN        Y APE       +   +
Sbjct: 191 PDTAVLKLCDFG-----SAKQLVR-------GEPNVSYICSRYYRAPELIFGATDYTSSI 238

Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
                   D W  GC + E+L G QP F G S
Sbjct: 239 --------DVWSAGCVLAELLLG-QPIFPGDS 261

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 72.1 bits (177), Expect = 8e-14
 Identities = 44/273 (16%), Positives = 85/273 (31%), Gaps = 66/273 (24%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
           + +G F  + L                A+K          K  + K  +      +  S+
Sbjct: 39  LNQGKFNKIILCEKDN--------KFYALKKY-------EKSLLEKKRDFTKSNNDKISI 83

Query: 111 CW----------------------LHGISVINGKICIAMKFYEG-------SVGDRIAQQ 141
                                     GI     ++ I  ++ E             + + 
Sbjct: 84  KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLN-----LKPSNLLLSEHDQLVLGDFGIP 196
               +P+  I      +    S +H+      N     +KPSN+L+ ++ ++ L DFG  
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNE----KNICHRDVKPSNILMDKNGRVKLSDFG-- 197

Query: 197 YLLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
                  + D  +    GT  +M PE    E    G    + D W  G  +  M   + P
Sbjct: 198 ---ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGA---KVDIWSLGICLYVMFYNVVP 251

Query: 255 WFGK-SVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
           +  K S+ E++++  I+ +    P      +  
Sbjct: 252 FSLKISLVELFNN--IRTKNIEYPLDRNHFLYP 282

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 71.6 bits (176), Expect = 9e-14
 Identities = 67/284 (23%), Positives = 111/284 (39%), Gaps = 43/284 (15%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
            P  +  +  ++G G +G V+ A H ++         +A+K + P++ D  ++     E 
Sbjct: 26  QPEEVFDVLEKLGEGSYGSVYKAIHKETGQ------IVAIKQV-PVESDLQEIIK---EI 75

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
              +  +S  V   +G    N  + I M++   GSV D I + R   L   +I       
Sbjct: 76  SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQST 134

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGT 215
            KG+  LH +  +  ++K  N+LL+      L DFG+        L+D+ MA R   +GT
Sbjct: 135 LKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGV-----AGQLTDT-MAKRNTVIGT 188

Query: 216 PNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV----VI 269
           P +MA     PEV      +   D W  G + +EM  G  P+         H +    +I
Sbjct: 189 PFWMA-----PEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD------IHPMRAIFMI 237

Query: 270 KKEKP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
               P     P        + +  C       R     +L H F
Sbjct: 238 PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 57/280 (20%), Positives = 117/280 (41%), Gaps = 35/280 (12%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP        +IG+G  G V+ A    +        E+A++ +   ++   ++ +N  E 
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIIN--EI 68

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
           L  +  ++ ++       ++  ++ + M++   GS+ D + +    +  +  + R   + 
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---EC 125

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGT 215
            + +  LHS  ++  ++K  N+LL     + L DFG    +        + + R   +GT
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI------TPEQSKRSTMVGT 179

Query: 216 PNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKE 272
           P +MA     PEV  R     + D W  G   +EM+ G  P+  ++ +  +Y   +    
Sbjct: 180 PYWMA-----PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL--IATNG 232

Query: 273 KPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            P +  P  L     + +  C E D+  R    ++L H F
Sbjct: 233 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF 272

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 67/297 (22%), Positives = 120/297 (40%), Gaps = 69/297 (23%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  L     +IG G  G V LA    S        ++AVKM+  L++        + E 
Sbjct: 42  DPRLLLDSYVKIGEGSTGIVCLAREKHSGR------QVAVKMM-DLRKQ------QRREL 88

Query: 100 LFPK---FRESQS--VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILR 153
           LF +    R+ Q   V  ++   ++  ++ + M+F + G++ D +      +L    I  
Sbjct: 89  LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIAT 145

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR- 212
               + + ++ LH+ G++  ++K  ++LL+   ++ L DFG    +        D+  R 
Sbjct: 146 VCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRK 199

Query: 213 --LGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
             +GTP +MA     PEV  R   + E D W  G  ++EM+ G  P+F            
Sbjct: 200 SLVGTPYWMA-----PEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF------------ 242

Query: 269 IKKEKP-----CIPSGLPPAVENV----------IIGCFEYDLRNRPLMADIL-HAF 309
              + P      +    PP ++N           +      D + R    ++L H F
Sbjct: 243 --SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 70.7 bits (174), Expect = 2e-13
 Identities = 49/242 (20%), Positives = 87/242 (35%), Gaps = 54/242 (22%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN---------- 95
                +G G F +V+L     +   F      A+K +            N          
Sbjct: 12  IFMEVLGSGAFSEVFLVKQRLTGKLF------ALKCIKKSPAFRDSSLENEIAVLKKIKH 65

Query: 96  ----KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPL 148
                 E+++    ES +               + M+   G  G   DRI ++  G    
Sbjct: 66  ENIVTLEDIY----ESTT------------HYYLVMQLVSG--GELFDRILER--GVYTE 105

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLS 205
            D      Q+   +  LH  G++  +LKP NLL     E+ ++++ DFG     L +   
Sbjct: 106 KDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFG-----LSKMEQ 160

Query: 206 DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH 265
           +  M+   GTP Y+APE    +         D W  G     +L G  P++ ++  +++ 
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSK---AVDCWSIGVITYILLCGYPPFYEETESKLFE 217

Query: 266 SV 267
            +
Sbjct: 218 KI 219

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 48/267 (17%), Positives = 92/267 (34%), Gaps = 36/267 (13%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-- 108
           +G G FG VW A   +         E+ VK +   KE   +    +  +L     E    
Sbjct: 32  LGSGAFGFVWTAVDKEKN------KEVVVKFIK--KEKVLEDCWIEDPKLGKVTLEIAIL 83

Query: 109 ------SVCWLHGISVINGKICIAMKFYE--GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
                 ++  +  I    G   + M+ +     +   I +    +L  P       QL  
Sbjct: 84  SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVS 141

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
            +  L    ++  ++K  N++++E   + L DFG                   GT  Y A
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG----SAAYLERGKLFYTFCGTIEYCA 197

Query: 221 PEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           PE       RGP   E + W  G ++  ++    P+    +EE   + +        P  
Sbjct: 198 PEVLMGNPYRGP---ELEMWSLGVTLYTLVFEENPFCE--LEETVEAAIH------PPYL 246

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADIL 306
           +   + +++ G  +     R  +  ++
Sbjct: 247 VSKELMSLVSGLLQPVPERRTTLEKLV 273

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 45/238 (18%), Positives = 83/238 (34%), Gaps = 34/238 (14%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G  G+V LA   ++          A++++   K                   
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKV------AIRIISKRKFAIGSAREADPALNV--ET 189

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E +         +  +           I ++  EG  G   D++      +L       Y
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEG--GELFDKVVGN--KRLKEATCKLY 244

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSDSD-MA 210
             Q+   +  LH  G++  +LKP N+LLS  ++   + + DFG       + L ++  M 
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----HSKILGETSLMR 299

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEIYHSV 267
              GTP Y+APE          +   D W  G  +   L+G  P    ++   +   +
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 70.0 bits (172), Expect = 4e-13
 Identities = 68/333 (20%), Positives = 107/333 (32%), Gaps = 72/333 (21%)

Query: 22  DPDHLRT---VVATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
           DPD L         P     W      LKL   +GRG FG V  A              +
Sbjct: 2   DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKT-ATCRTV 60

Query: 78  AVKMLLPLKEDCAKVFVNKFE---ELFPKFRESQSVCWLHGISVINGK-ICIAMKF---- 129
           AVKM   LKE              ++        +V  L G     G  + + ++F    
Sbjct: 61  AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117

Query: 130 -----------YEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPS 178
                                      L L  ++ Y  Q+AKG+  L S   +  +L   
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177

Query: 179 NLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY------------MAPEQWEP 226
           N+LLSE + + + DFG     L R +            +Y            MAPE    
Sbjct: 178 NILLSEKNVVKICDFG-----LARDIYKDP--------DYVRKGDARLPLKWMAPE---- 220

Query: 227 EVRGPISF-------ETDTWGFGCSIMEMLT-GIQPWFGKSV-EEIYHSVVIKKEKPCIP 277
                 +        ++D W FG  + E+ + G  P+ G  + EE    +         P
Sbjct: 221 ------TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-P 273

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
               P +   ++ C+  +   RP  ++++    
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 45/238 (18%), Positives = 81/238 (34%), Gaps = 32/238 (13%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           + K  +GRG    V    H  +        E AVK++             +        +
Sbjct: 20  EPKEILGRGVSSVVRRCIHKPTC------KEYAVKIIDVTGGGSFSAEEVQELREATL-K 72

Query: 106 ESQ---------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILR 153
           E           ++  L      N    +     +   G   D + ++    L   +  +
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK--GELFDYLTEK--VTLSEKETRK 128

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD-MALR 212
               L + I  LH + ++  +LKP N+LL +   + L DFG         L   + +   
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG-----FSCQLDPGEKLREV 183

Query: 213 LGTPNYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
            GTP+Y+APE       +       E D W  G  +  +L G  P++ +    +   +
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 68.4 bits (168), Expect = 7e-13
 Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 42/237 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G+G FG+V       +  ++      AVK++   K        +         R
Sbjct: 25  NIVCMLGKGSFGEVLKCKDRITQQEY------AVKVIN--KASAKNKDTSTIL------R 70

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E +        ++  L  I   +    I  + Y G  G   D I ++   +    D  R 
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG--GELFDEIIKR--KRFSEHDAARI 126

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSD-MA 210
             Q+  GI+ +H   ++  +LKP N+LL    +   + + DFG     L      +  M 
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG-----LSTCFQQNTKMK 181

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
            R+GT  Y+APE     +RG    + D W  G  +  +L+G  P++GK+  +I   V
Sbjct: 182 DRIGTAYYIAPEV----LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 68.0 bits (167), Expect = 8e-13
 Identities = 51/237 (21%), Positives = 87/237 (36%), Gaps = 44/237 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            L++ IGRG +G+V +A    +          A K +        K FV   +      +
Sbjct: 12  TLENTIGRGSWGEVKIAVQKGTRIRR------AAKKI-------PKYFVEDVDRFK---Q 55

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E +        ++  L+     N  I + M+   G  G   +R+  +        D  R 
Sbjct: 56  EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG--GELFERVVHK--RVFRESDAARI 111

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSD-MA 210
              +   ++  H + +   +LKP N L    S    L L DFG     L         M 
Sbjct: 112 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG-----LAARFKPGKMMR 166

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
            ++GTP Y++P+     + G    E D W  G  +  +L G  P+   +  E+   +
Sbjct: 167 TKVGTPYYVSPQV----LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI 219

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 69.3 bits (170), Expect = 9e-13
 Identities = 67/271 (24%), Positives = 101/271 (37%), Gaps = 75/271 (27%)

Query: 21  GDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK 80
            DP+ +  V+A+  +T       +      IG G FG V+ A   +S        E+A+K
Sbjct: 19  DDPNKVIKVLASDGKT-GEQREIAYTNCKVIGNGSFGVVFQAKLVES-------DEVAIK 70

Query: 81  MLLPLKEDCAKVFVNKFEELFPKFRESQS--------VCWLHGISVING------KICIA 126
                     KV  +K  +     RE Q         V  L      NG       + + 
Sbjct: 71  ----------KVLQDKRFKN----RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116

Query: 127 MKFYEGSVGDRIAQQRGGKLPLPDIL--RYGIQLAKGISDLHSIGLLVLNLKPSNLLL-S 183
           +++   +V          K  +P +L   Y  QL + ++ +HSIG+   ++KP NLLL  
Sbjct: 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP 176

Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN--------YMAPE------QWEPEVR 229
               L L DFG       + L         G PN        Y APE       +   + 
Sbjct: 177 PSGVLKLIDFG-----SAKILIA-------GEPNVSYICSRYYRAPELIFGATNYTTNI- 223

Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
                  D W  GC + E++ G QP F G+S
Sbjct: 224 -------DIWSTGCVMAELMQG-QPLFPGES 246

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 69.0 bits (169), Expect = 1e-12
 Identities = 52/241 (21%), Positives = 88/241 (36%), Gaps = 39/241 (16%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
             K  IGRG    V    H  +       HE AVK++    E  +   + +  E     R
Sbjct: 97  DPKDVIGRGVSSVVRRCVHRATG------HEFAVKIMEVTAERLSPEQLEEVREAT--RR 148

Query: 106 ESQSVCWLHGIS----VI--------NGKICIAMKFYEGSVG---DRIAQQRGGKLPLPD 150
           E      L  ++    +I        +  + +         G   D + ++    L   +
Sbjct: 149 E---THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRK--GELFDYLTEK--VALSEKE 201

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD-M 209
                  L + +S LH+  ++  +LKP N+LL ++ Q+ L DFG         L   + +
Sbjct: 202 TRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG-----FSCHLEPGEKL 256

Query: 210 ALRLGTPNYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS 266
               GTP Y+APE       E       E D W  G  +  +L G  P++ +    +   
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316

Query: 267 V 267
           +
Sbjct: 317 I 317

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 59/330 (17%), Positives = 115/330 (34%), Gaps = 75/330 (22%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W     +L+    +G G FG V  AT +  +       ++AVKM   LKE          
Sbjct: 40  WEFPRENLEFGKVLGSGAFGKVMNATAYGISKT-GVSIQVAVKM---LKEKADSSEREAL 95

Query: 98  E---ELFPKFRESQSVCWLHGISVINGKICIAMKF----------------------YEG 132
               ++  +    +++  L G   ++G I +  ++                         
Sbjct: 96  MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155

Query: 133 SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD 192
           +      ++    L   D+L +  Q+AKG+  L     +  +L   N+L++    + + D
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215

Query: 193 FGIPYLLLGRSLSDSDMALRLGTPNY------------MAPEQWEPEVRGPI-----SFE 235
           FG     L R +            NY            MAPE         +     + +
Sbjct: 216 FG-----LARDIMSDS--------NYVVRGNARLPVKWMAPES--------LFEGIYTIK 254

Query: 236 TDTWGFGCSIMEMLT-GIQPWFGKSV-EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
           +D W +G  + E+ + G+ P+ G  V    Y  +    +    P      +  ++  C+ 
Sbjct: 255 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ-PFYATEEIYIIMQSCWA 313

Query: 294 YDLRNRPLMADILHAFE----SSQNAVYND 319
           +D R RP   ++          ++ A+Y +
Sbjct: 314 FDSRKRPSFPNLTSFLGCQLADAEEAMYQN 343

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 65/285 (22%), Positives = 102/285 (35%), Gaps = 56/285 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-F 104
            L   +G G +G+V LA +  +         +AVK++             +  +      
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIV-------DM---KRAVDCPENIK 53

Query: 105 RESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILR 153
           +E          +V   +G         + +++  G  G   DRI       +P PD  R
Sbjct: 54  KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPD--IGMPEPDAQR 109

Query: 154 YGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           +  QL  G+  LH IG+   ++KP NLLL E D L + DFG     L      ++    L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERLL 164

Query: 214 ----GTPNYMAPEQWEPEV------RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
               GT  Y+A     PE+              D W  G  +  ML G  PW   S    
Sbjct: 165 NKMCGTLPYVA-----PELLKRREFHAE---PVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216

Query: 264 YHSVVIKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH 307
            +S   +K+    P   +  A   ++      +   R  + DI  
Sbjct: 217 EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 66.9 bits (164), Expect = 4e-12
 Identities = 58/277 (20%), Positives = 91/277 (32%), Gaps = 79/277 (28%)

Query: 21  GDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK 80
           G    +    A     R   +    +++   G+G FG V L     +          A+K
Sbjct: 1   GPGSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSV------AIK 54

Query: 81  MLLPLKEDCAKVFVNKFEELFPKFRESQS------------VCWLHGISVINGK------ 122
                     KV  +     F + RE Q             V        +  +      
Sbjct: 55  ----------KVIQDP---RF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100

Query: 123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDIL--RYGIQLAKGISDLHSIGLLVLN--LKPS 178
           + + M++   ++          ++  P IL   +  QL + I  LH   + V +  +KP 
Sbjct: 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPH 160

Query: 179 NLLLSEHD-QLVLGDFGIPYLLLGRSLSDSDMALRLGTPN--------YMAPE------Q 223
           N+L++E D  L L DFG       + LS          PN        Y APE       
Sbjct: 161 NVLVNEADGTLKLCDFG-----SAKKLSP-------SEPNVAYICSRYYRAPELIFGNQH 208

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
           +   V        D W  GC   EM+ G +P F G +
Sbjct: 209 YTTAV--------DIWSVGCIFAEMMLG-EPIFRGDN 236

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 52/237 (21%), Positives = 89/237 (37%), Gaps = 41/237 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +K  +G+G F  V    H  +        E A K++    +  +     K E      R
Sbjct: 9   DVKEELGKGAFSVVRRCVHKTTG------LEFAAKIIN--TKKLSARDFQKLE------R 54

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E++        ++  LH          +      G  G   + I  +        D    
Sbjct: 55  EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG--GELFEDIVAR--EFYSEADASHC 110

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSD-MA 210
             Q+ + I+  HS G++  NLKP NLLL   ++   + L DFG     L   ++DS+   
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG-----LAIEVNDSEAWH 165

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
              GTP Y++PE  + +         D W  G  +  +L G  P++ +    +Y  +
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSK---PVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 219

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 64/280 (22%), Positives = 101/280 (36%), Gaps = 56/280 (20%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-FRESQ- 108
           +G G +G+V LA +  +         +AVK++             +  +      +E   
Sbjct: 15  LGEGAYGEVQLAVNRVTE------EAVAVKIV-------DM---KRAVDCPENIKKEICI 58

Query: 109 -------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQL 158
                  +V   +G         + +++  G  G   DRI       +P PD  R+  QL
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPD--IGMPEPDAQRFFHQL 114

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL----G 214
             G+  LH IG+   ++KP NLLL E D L + DFG     L      ++    L    G
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERLLNKMCG 169

Query: 215 TPNYMAPEQWEPEV------RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
           T  Y+A     PE+              D W  G  +  ML G  PW   S     +S  
Sbjct: 170 TLPYVA-----PELLKRREFHAE---PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221

Query: 269 IKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH 307
            +K+    P   +  A   ++      +   R  + DI  
Sbjct: 222 KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 44/272 (16%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-FRESQ- 108
           +G G FG V+                +A+K +     +  ++          +   E   
Sbjct: 51  LGSGGFGSVYSGIRVSDN------LPVAIKHV-----EKDRISDWGELPNGTRVPMEVVL 99

Query: 109 ---------SVCWLHGISVINGKICIAMKFYEGS--VGDRIAQQRGGKLPLPDILRYGIQ 157
                     V  L           + ++  E    + D I ++  G L       +  Q
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 157

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTP 216
           + + +   H+ G+L  ++K  N+L+  +   + L DFG   LL     +D D     GT 
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-----GTR 212

Query: 217 NYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
            Y  PE        G        W  G  + +M+ G  P+             I + +  
Sbjct: 213 VYSPPEWIRYHRYHGR---SAAVWSLGILLYDMVCGDIPFEHDEE--------IIRGQVF 261

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
               +    +++I  C      +RP   +I +
Sbjct: 262 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 42/224 (18%), Positives = 75/224 (33%), Gaps = 42/224 (18%)

Query: 51  IGRGPFGDVWLATHHQ-----------SADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           +G G F  VWLA                   + E  E  +K+L  + +       +    
Sbjct: 27  LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86

Query: 100 LFPKFRES---QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
              K  +    +    +H        + +  +    ++   I +     +PL  + +   
Sbjct: 87  HILKLLDHFNHKGPNGVH--------VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138

Query: 157 QLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQ------LVLGDFGIPYLLLGRSLSDSDM 209
           QL  G+  +H   G++  ++KP N+L+   D       + + D G           D   
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN------ACWYDEHY 192

Query: 210 ALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTG 251
              + T  Y +PE     V    P     D W   C I E++TG
Sbjct: 193 TNSIQTREYRSPE-----VLLGAPWGCGADIWSTACLIFELITG 231

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 49/229 (21%), Positives = 84/229 (36%), Gaps = 38/229 (16%)

Query: 48  KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRES 107
           K  +G G  G V    H ++          A+K+L     D  K    +  +   +    
Sbjct: 34  KQVLGLGVNGKVLECFHRRTGQKC------ALKLL----YDSPKAR--QEVDHHWQASGG 81

Query: 108 QSVCWLHGI----SVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPD---ILRYGIQ 157
             +  +  +          + I M+  EG  G    RI ++        +   I+R    
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEG--GELFSRIQERGDQAFTEREAAEIMR---D 136

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSDSDMALRLG 214
           +   I  LHS  +   ++KP NLL +  ++   L L DFG       +  + + +     
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG-----FAKETTQNALQTPCY 191

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
           TP Y+APE   PE         D W  G  +  +L G  P++  + + I
Sbjct: 192 TPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGFPPFYSNTGQAI 237

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 46/244 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKEDCAKVFVNKFEELF 101
            +   +G G  G+V LA   ++        ++A+K++      +            E   
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTC------KKVAIKIISKRKFAIGSAREADPALNVE--- 63

Query: 102 PKFRESQSVCWLHGIS---VIN-------GKICIAMKFYEGSVG---DRIAQQRGGKLPL 148
               E   +  L  ++   +I            I ++  EG  G   D++      +L  
Sbjct: 64  ---TE---IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG--GELFDKVVGN--KRLKE 113

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPYLLLGRSLS 205
                Y  Q+   +  LH  G++  +LKP N+LLS  +    + + DFG       + L 
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----HSKILG 168

Query: 206 DSD-MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEI 263
           ++  M    GTP Y+APE          +   D W  G  +   L+G  P    ++   +
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228

Query: 264 YHSV 267
              +
Sbjct: 229 KDQI 232

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 50/245 (20%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +L   IG+GPF  V    + ++   F      AVK++               E+L    R
Sbjct: 27  ELCEVIGKGPFSVVRRCINRETGQQF------AVKIVD--VAKFTSSPGLSTEDLK---R 75

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLP----- 149
           E+          +  L      +G + +  +F +G        I ++             
Sbjct: 76  EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG--ADLCFEIVKRADAGFVYSEAVAS 133

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPYLLLGRSLSD 206
             +R   Q+ + +   H   ++  ++KP  +LL+  +    + LG FG     +   L +
Sbjct: 134 HYMR---QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG-----VAIQLGE 185

Query: 207 SDMAL--RLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
           S +    R+GTP++MA     PEV  R P     D WG G  +  +L+G  P++G   E 
Sbjct: 186 SGLVAGGRVGTPHFMA-----PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ER 239

Query: 263 IYHSV 267
           ++  +
Sbjct: 240 LFEGI 244

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 63.9 bits (156), Expect = 4e-11
 Identities = 55/239 (23%), Positives = 90/239 (37%), Gaps = 45/239 (18%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +K  +G+G F  V    H  +        E A K++    +  +     K E      R
Sbjct: 32  DVKEELGKGAFSVVRRCVHKTTG------LEFAAKIIN--TKKLSARDFQKLE------R 77

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E++        ++  LH          +      G  G   + I  +        D    
Sbjct: 78  EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG--GELFEDIVAR--EFYSEADASHC 133

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPYLLLGRSLSDSD-MA 210
             Q+ + I+  HS G++  NLKP NLLL+       + L DFG     L   ++DS+   
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG-----LAIEVNDSEAWH 188

Query: 211 LRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
              GTP Y++     PEV  + P S   D W  G  +  +L G  P++ +    +Y  +
Sbjct: 189 GFAGTPGYLS-----PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 242

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 63.6 bits (155), Expect = 5e-11
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 39/153 (25%)

Query: 125 IAMKFYEGSVGDRIAQQRGGKLPLPDIL--RYGIQLAKGISDLHSIGLLVLNLKPSNLLL 182
           + M++   ++   +         +P  L   Y  QL + +  +HS+G+   ++KP NLL+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174

Query: 183 -SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN--------YMAPE------QWEPE 227
            S+ + L L DFG       + L           P+        Y APE      ++ P 
Sbjct: 175 NSKDNTLKLCDFG-----SAKKLIP-------SEPSVAYICSRFYRAPELMLGATEYTPS 222

Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
           +        D W  GC   E++ G +P F G++
Sbjct: 223 I--------DLWSIGCVFGELILG-KPLFSGET 246

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 63.1 bits (154), Expect = 5e-11
 Identities = 50/275 (18%), Positives = 87/275 (31%), Gaps = 48/275 (17%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQ- 108
           +G+G FG V+               ++A+K++        +V   +   +      E   
Sbjct: 39  LGKGGFGTVFAGHRLTDR------LQVAIKVI-----PRNRVLGWSPLSDSVTCPLEVAL 87

Query: 109 -----------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
                       V  L           + ++          D I ++  G L       +
Sbjct: 88  LWKVGAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEK--GPLGEGPSRCF 144

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV-LGDFGIPYLLLGRSLSDSDMALRL 213
             Q+   I   HS G++  ++K  N+L+        L DFG   LL     +D D     
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----- 199

Query: 214 GTPNYMAPEQWEPEV-RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
           GT  Y  PE                 W  G  + +M+ G  P+             I + 
Sbjct: 200 GTRVYSPPEWISRHQYHAL---PATVWSLGILLYDMVCGDIPFERDQE--------ILEA 248

Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
           +   P+ + P    +I  C      +RP + +IL 
Sbjct: 249 ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 62.5 bits (153), Expect = 7e-11
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 28/134 (20%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
              G L    +  +  QL KG+   HS  +L  +LKP NLL++ + +L L +FG     L
Sbjct: 93  SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFG-----L 147

Query: 201 GRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEML 249
            R+       +R  +       Y  P+       +   +        D W  GC   E+ 
Sbjct: 148 ARAFGI---PVRCYSAEVVTLWYRPPDVLFGAKLYSTSI--------DMWSAGCIFAELA 196

Query: 250 TGIQPWF-GKSVEE 262
              +P F G  V++
Sbjct: 197 NAGRPLFPGNDVDD 210

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 62.7 bits (153), Expect = 9e-11
 Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 42/234 (17%)

Query: 39  WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
           W +    +L  ++GRG + +V+ A +  + +      ++ VK+L P+K+   K       
Sbjct: 32  WGNQDDYQLVRKLGRGKYSEVFEAINITNNE------KVVVKILKPVKKKKIK------R 79

Query: 99  E--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGD--RIAQQRGGKLPLPDILRY 154
           E  +    R   ++  L  I         A+ F   +  D  ++ Q     L   DI  Y
Sbjct: 80  EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFY 135

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL-SEHDQLVLGDFGIPYLLLGRSLS-DSDMALR 212
             ++ K +   HS+G++  ++KP N+++  EH +L L D+G     L        +  +R
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LAEFYHPGQEYNVR 190

Query: 213 LGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
           + +  +  PE       ++  +        D W  GC +  M+   +P+F G  
Sbjct: 191 VASRYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPFFHGHD 236

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 62.6 bits (153), Expect = 9e-11
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 29/134 (21%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
             G  + + ++  +  QL +G++  H   +L  +LKP NLL++E  +L L DFG     L
Sbjct: 92  DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFG-----L 146

Query: 201 GRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEML 249
            R+ S      +          Y  P+       +  ++        D WG GC   EM 
Sbjct: 147 ARAKSI---PTKTYDNEVVTLWYRPPDILLGSTDYSTQI--------DMWGVGCIFYEMA 195

Query: 250 TGIQPWF-GKSVEE 262
           TG +P F G +VEE
Sbjct: 196 TG-RPLFPGSTVEE 208

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 47/240 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           ++K  IG G +       H  +  +F      AVK++   K D         EE+    R
Sbjct: 25  EVKEDIGVGSYSVCKRCIHKATNMEF------AVKIIDKSKRDP-------TEEIEILLR 71

Query: 106 ESQ--SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPD---ILRYGIQ 157
             Q  ++  L  +      + +  +  +G  G   D+I +Q        +   +L     
Sbjct: 72  YGQHPNIITLKDVYDDGKYVYVVTELMKG--GELLDKILRQ--KFFSEREASAVLF---T 124

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQ----LVLGDFGIPYLLLGRSLSDSDMALR- 212
           + K +  LH+ G++  +LKPSN+L  +       + + DFG       + L   +  L  
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG-----FAKQLRAENGLLMT 179

Query: 213 -LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM-EMLTGIQPWFGKSVE---EIYHSV 267
              T N++APE  E +         D W  G  ++  MLTG  P+     +   EI   +
Sbjct: 180 PCYTANFVAPEVLERQGYDA---ACDIWSLGV-LLYTMLTGYTPFANGPDDTPEEILARI 235

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 48/238 (20%), Positives = 85/238 (35%), Gaps = 42/238 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +L   +G+G F  V       +  ++      A  ++    +  +     K E      R
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEY------AAMIIN--TKKLSARDHQKLE------R 59

Query: 106 ESQ--------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRY 154
           E++        ++  LH      G   +      G  G   + I  +        D    
Sbjct: 60  EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG--GELFEDIVAR--EYYSEADASHC 115

Query: 155 GIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
             Q+ + +   H +G++  NLKP NLLL    +   + L DFG+   + G          
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG---EQQAWFG 172

Query: 212 RLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
             GTP Y++     PEV  + P     D W  G  +  +L G  P++ +    +Y  +
Sbjct: 173 FAGTPGYLS-----PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 225

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 29/134 (21%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
              G L       + +QL  GI+  H   +L  +LKP NLL++   +L + DFG     L
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG-----L 146

Query: 201 GRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEML 249
            R+       +R  T       Y AP+      ++   +        D W  GC   EM+
Sbjct: 147 ARAFGIP---VRKYTHEIVTLWYRAPDVLMGSKKYSTTI--------DIWSVGCIFAEMV 195

Query: 250 TGIQPWF-GKSVEE 262
            G  P F G S  +
Sbjct: 196 NG-TPLFPGVSEAD 208

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 61.0 bits (149), Expect = 3e-10
 Identities = 46/240 (19%), Positives = 92/240 (38%), Gaps = 59/240 (24%)

Query: 50  RIGRGPFGDVWLATHHQSADDFDEYHEL-AVKMLLPLKEDCAKVFVNKFEELFPK--FRE 106
           +IG G +G V+   +  +        ++ A+K          K   ++ + +  K   RE
Sbjct: 10  KIGEGSYGVVFKCRNRDT-------GQIVAIK----------KFLESEDDPVIKKIALRE 52

Query: 107 --------SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
                     ++  L  +     ++ +  ++ + +V   +  +    +P   +     Q 
Sbjct: 53  IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL-DRYQRGVPEHLVKSITWQT 111

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN- 217
            + ++  H    +  ++KP N+L+++H  + L DFG       R L+             
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFG-----FARLLTGP---SDYYDDEV 163

Query: 218 ----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS-VEEIYH 265
               Y +PE      Q+ P V        D W  GC   E+L+G  P + GKS V+++Y 
Sbjct: 164 ATRWYRSPELLVGDTQYGPPV--------DVWAIGCVFAELLSG-VPLWPGKSDVDQLYL 214

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 61.2 bits (149), Expect = 3e-10
 Identities = 62/280 (22%), Positives = 94/280 (33%), Gaps = 56/280 (20%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-- 108
           IG G FG   L     +         +AVK +     +         +      RE    
Sbjct: 28  IGSGNFGVARLMRDKLTK------ELVAVKYI-----ERGAAIDENVQ------REIINH 70

Query: 109 ------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQLA 159
                 ++     + +    + I M++  G  G   +RI     G+    +   +  QL 
Sbjct: 71  RSLRHPNIVRFKEVILTPTHLAIIMEYASG--GELYERICNA--GRFSEDEARFFFQQLL 126

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVL--GDFGIPYLLLGRSLSDSDMALRLGTPN 217
            G+S  HS+ +   +LK  N LL       L   DFG        S+  S     +GTP 
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKSTVGTPA 182

Query: 218 YMAPEQWEPEV------RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--I 269
           Y+A     PEV       G      D W  G ++  ML G  P+        Y   +  I
Sbjct: 183 YIA-----PEVLLRQEYDGK---IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI 234

Query: 270 KKEKPCIPSG--LPPAVENVIIGCFEYDLRNRPLMADILH 307
              K  IP    + P   ++I   F  D   R  + +I  
Sbjct: 235 LSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 60.6 bits (148), Expect = 3e-10
 Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 34/164 (20%)

Query: 113 LHGISVINGKICIAMKFYEGSVGD--RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGL 170
           L  +      + +  +F E    D  ++  +    L    I  Y  QL +G++  H   +
Sbjct: 84  LIDVIHSERCLTLVFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140

Query: 171 LVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN-----YMAPE--- 222
           L  +LKP NLL++    L L DFG     L R+       +R  T       Y AP+   
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFG-----LARAFGI---PVRSYTHEVVTLWYRAPDVLM 192

Query: 223 ---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
              ++   V        D W  GC   EM+TG +P F G + ++
Sbjct: 193 GSKKYSTSV--------DIWSIGCIFAEMITG-KPLFPGVTDDD 227

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 59.9 bits (146), Expect = 7e-10
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 29/139 (20%)

Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI 195
            R        L L  +  +  QL +G++  H   +L  +LKP NLL+++  QL LGDFG 
Sbjct: 95  SRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG- 153

Query: 196 PYLLLGRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETDTWGFGCS 244
               L R+       +   +       Y AP+       +   +        D W  GC 
Sbjct: 154 ----LARAFGIP---VNTFSSEVVTLWYRAPDVLMGSRTYSTSI--------DIWSCGCI 198

Query: 245 IMEMLTGIQPWF-GKSVEE 262
           + EM+TG +P F G + EE
Sbjct: 199 LAEMITG-KPLFPGTNDEE 216

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 59.9 bits (146), Expect = 7e-10
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 30/138 (21%)

Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
                L    + +Y  Q+  GI   HS  ++  ++KP N+L+S+   + L DFG      
Sbjct: 116 LFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFG-----F 170

Query: 201 GRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEML 249
            R+L+       +         Y APE      ++   V        D W  GC + EM 
Sbjct: 171 ARTLAA---PGEVYDDEVATRWYRAPELLVGDVKYGKAV--------DVWAIGCLVTEMF 219

Query: 250 TGIQPWF-GKS-VEEIYH 265
            G +P F G S ++++YH
Sbjct: 220 MG-EPLFPGDSDIDQLYH 236

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 59.9 bits (146), Expect = 8e-10
 Identities = 44/164 (26%), Positives = 59/164 (35%), Gaps = 34/164 (20%)

Query: 113 LHGISVINGKICIAMKFYEGSVGD--RIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGL 170
           L         I +   F E    D   I +     L    I  Y +   +G+  LH   +
Sbjct: 77  LLDAFGHKSNISLVFDFMET---DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133

Query: 171 LVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN-----YMAPE--- 222
           L  +LKP+NLLL E+  L L DFG     L +S        R  T       Y APE   
Sbjct: 134 LHRDLKPNNLLLDENGVLKLADFG-----LAKSFGS---PNRAYTHQVVTRWYRAPELLF 185

Query: 223 ---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
               +   V        D W  GC + E+L    P+  G S  +
Sbjct: 186 GARMYGVGV--------DMWAVGCILAELLLR-VPFLPGDSDLD 220

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 60.1 bits (146), Expect = 8e-10
 Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 39/237 (16%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
               +G G  G V    + ++ + F      A+KML    +DC K    +  EL  +  +
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKF------ALKML----QDCPKAR--REVELHWRASQ 113

Query: 107 SQSVCWLHGI----SVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQLA 159
              +  +  +          + I M+  +G  G    RI  +        +       + 
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIG 171

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSDSD-MALRLGT 215
           + I  LHSI +   ++KP NLL +       L L DFG       +  +  + +     T
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG-----FAKETTSHNSLTTPCYT 226

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIM-EMLTGIQPWFGKSV----EEIYHSV 267
           P Y+APE   PE         D W  G  IM  +L G  P++          +   +
Sbjct: 227 PYYVAPEVLGPEKYDK---SCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRI 279

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGT 215
           Q+  GI  LHS G++  +LKPSN+++     L + DFG     L R+   S  M   + T
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYVVT 189

Query: 216 PNYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
             Y APE                 D W  GC + EM+ G    F G  
Sbjct: 190 RYYRAPEVILGMG------YKENVDIWSVGCIMGEMIKG-GVLFPGTD 230

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 58.0 bits (141), Expect = 3e-09
 Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 29/133 (21%)

Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
           + +     +P   I     QL +G+  LHS  ++  +LKP N+L++   Q+ L DFG   
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--- 165

Query: 198 LLLGRSLSDSDMALRLGTPN-----YMAPE-----QWEPEVRGPISFETDTWGFGCSIME 247
             L R  S     + L T       Y APE      +   V        D W  GC   E
Sbjct: 166 --LARIYSFQ---MAL-TSVVVTLWYRAPEVLLQSSYATPV--------DLWSVGCIFAE 211

Query: 248 MLTGIQPWF-GKS 259
           M    +P F G S
Sbjct: 212 MFRR-KPLFRGSS 223

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 58.0 bits (141), Expect = 3e-09
 Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 27/131 (20%)

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG 201
              K  L +I R    L  G+  +H   +L  ++K +N+L++    L L DFG     L 
Sbjct: 117 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG-----LA 171

Query: 202 RSLSDSDMALRLG-TPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEML 249
           R+ S +  +     T       Y  PE       + P +        D WG GC + EM 
Sbjct: 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI--------DLWGAGCIMAEMW 223

Query: 250 TGIQPWF-GKS 259
           T   P   G +
Sbjct: 224 TR-SPIMQGNT 233

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 56.9 bits (138), Expect = 8e-09
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 22/110 (20%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ KG+  +HS G++  +LKP NL ++E  +L + DFG     L R  +D++M   + T 
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG-----LARH-ADAEMTGYVVTR 187

Query: 217 NYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
            Y APE       +   V        D W  GC + EMLTG +  F GK 
Sbjct: 188 WYRAPEVILSWMHYNQTV--------DIWSVGCIMAEMLTG-KTLFKGKD 228

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 56.5 bits (137), Expect = 8e-09
 Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 34/138 (24%)

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-----QLVLGDFGIP 196
           +   + +  I  +  QL  G++  HS   L  +LKP NLLLS  D      L +GDFG  
Sbjct: 125 KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG-- 182

Query: 197 YLLLGRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETDTWGFGCSI 245
              L R+       +R  T       Y  PE       +   V        D W   C  
Sbjct: 183 ---LARAFGIP---IRQFTHEIITLWYRPPEILLGSRHYSTSV--------DIWSIACIW 228

Query: 246 MEMLTGIQPWF-GKSVEE 262
            EML    P F G S  +
Sbjct: 229 AEMLMK-TPLFPGDSEID 245

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 56.4 bits (137), Expect = 8e-09
 Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 29/133 (21%)

Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
           + +     LP   I     Q  +G+  LH+  ++  +LKP N+L++    + L DFG   
Sbjct: 109 LDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG--- 165

Query: 198 LLLGRSLSDSDMALRLGTPN-----YMAPE-----QWEPEVRGPISFETDTWGFGCSIME 247
             L R  S     + L TP      Y APE      +   V        D W  GC   E
Sbjct: 166 --LARIYSYQ---MAL-TPVVVTLWYRAPEVLLQSTYATPV--------DMWSVGCIFAE 211

Query: 248 MLTGIQPWF-GKS 259
           M    +P F G S
Sbjct: 212 MFRR-KPLFCGNS 223

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 22/110 (20%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  +HS  ++  +LKPSNL ++E  +L + DFG     L R  +  +M   + T 
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TADEMTGYVATR 193

Query: 217 NYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
            Y APE       +   V        D W  GC + E+LTG +  F G  
Sbjct: 194 WYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLTG-RTLFPGTD 234

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 42/247 (17%), Positives = 85/247 (34%), Gaps = 52/247 (21%)

Query: 39  WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
               +   ++  I  G +G V      +          +A+K +           VN   
Sbjct: 18  HAMQSPYTVQRFISSGSYGAVCAGVDSEG-------IPVAIKRVF--NTVSDGRTVNILS 68

Query: 99  -ELFPK--FRESQSVCWLHG---ISVIN----------GKICIAMKFYEGSVGDRIAQQR 142
                K   RE + +   H    + + +           K+ +  +     +   I    
Sbjct: 69  DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---H 125

Query: 143 GGKLPLPDI-LRYGI-QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL 200
             ++ +    ++Y +  +  G+  LH  G++  +L P N+LL++++ + + DF      L
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN-----L 180

Query: 201 GRSLS-DSDMALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQ 253
            R  + D++    +    Y APE       +   V        D W  GC + EM    +
Sbjct: 181 AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLV--------DMWSAGCVMAEMFNR-K 231

Query: 254 PWF-GKS 259
             F G +
Sbjct: 232 ALFRGST 238

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 51/269 (18%), Positives = 90/269 (33%), Gaps = 62/269 (23%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE-ELFPK 103
           ++  +IG G FG++ L  +  + +       +A+K+     E   ++      E   + +
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNE------YVAIKL-----EPMKSRAPQLHLEYRFYKQ 60

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                 +  ++          + ++    S+ D +         L  +L   IQL   + 
Sbjct: 61  LGSGDGIPQVYYFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRME 119

Query: 164 DLHSIGLLVLNLKPSNLLL-----SEHDQLVLGDFG-------------IPYLLLGRSLS 205
            +HS  L+  ++KP N L+          + + DF              IPY    +SL+
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPY-REHKSLT 178

Query: 206 DSDMALRLGTPNYMAP------EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-- 257
                   GT  YM+       EQ         S   D    G   M  L G  PW G  
Sbjct: 179 --------GTARYMSINTHLGKEQ---------SRRDDLEALGHMFMYFLRGSLPWQGLK 221

Query: 258 -KSVEEIYHSVVIKKEKPCIP---SGLPP 282
             +++E Y  +   K    I       P 
Sbjct: 222 ADTLKERYQKIGDTKRATPIEVLCENFPE 250

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 55/269 (20%), Positives = 91/269 (33%), Gaps = 64/269 (23%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE-ELFPK 103
           +L  +IG G FGD++L T   + +      E+A+K+     E    K      E +++  
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGE------EVAIKL-----ECVKTKHPQLHIESKIYKM 60

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
            +    +  +           + M+    S+ D        K  L  +L    Q+   I 
Sbjct: 61  MQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFC-SRKFSLKTVLLLADQMISRIE 119

Query: 164 DLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFG-------------IPYLLLGRSLSDS 207
            +HS   +  ++KP N L+    + + + + DFG             IPY    ++L   
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY-RENKNL--- 175

Query: 208 DMALRLGTPNYMAP------EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG---K 258
                 GT  Y +       EQ         S   D    G  +M    G  PW G    
Sbjct: 176 -----TGTARYASINTHLGIEQ---------SRRDDLESLGYVLMYFNLGSLPWQGLKAA 221

Query: 259 SVEEIYHSVVIKKEKPCIP-----SGLPP 282
           +  + Y  +  KK     P      G P 
Sbjct: 222 TKRQKYERISEKKMS--TPIEVLCKGYPS 248

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 55.6 bits (134), Expect = 3e-08
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 21/110 (19%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGT 215
           Q+  GI  LHS G++  +LKPSN+++     L + DFG     L R+   S  M   + T
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYVVT 226

Query: 216 PNYMAPE-----QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
             Y APE      ++  V        D W  GC + EM+   +  F G+ 
Sbjct: 227 RYYRAPEVILGMGYKENV--------DIWSVGCIMGEMVRH-KILFPGRD 267

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 55.0 bits (133), Expect = 3e-08
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 22/110 (20%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ KG+  +H+ G++  +LKP NL ++E  +L + DFG     L R  +DS+M   + T 
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG-----LARQ-ADSEMTGYVVTR 189

Query: 217 NYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
            Y APE      ++   V        D W  GC + EM+TG +  F G  
Sbjct: 190 WYRAPEVILNWMRYTQTV--------DIWSVGCIMAEMITG-KTLFKGSD 230

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 54.6 bits (132), Expect = 4e-08
 Identities = 49/237 (20%), Positives = 82/237 (34%), Gaps = 39/237 (16%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE-ELFPKFR 105
               +G G F       H +S   F      AVK++   K   A     + E        
Sbjct: 15  KDKPLGEGSFSICRKCVHKKSNQAF------AVKIIS--KRMEANT---QKEITALKLCE 63

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQLAKGI 162
              ++  LH +        + M+   G  G   +RI ++        +      +L   +
Sbjct: 64  GHPNIVKLHEVFHDQLHTFLVMELLNG--GELFERIKKK--KHFSETEASYIMRKLVSAV 119

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSDSDMALR--LGTPN 217
           S +H +G++  +LKP NLL ++ +    + + DFG       R     +  L+    T +
Sbjct: 120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG-----FARLKPPDNQPLKTPCFTLH 174

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-------SVEEIYHSV 267
           Y APE              D W  G  +  ML+G  P+          S  EI   +
Sbjct: 175 YAAPELLNQNGYDE---SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 55.0 bits (132), Expect = 4e-08
 Identities = 57/266 (21%), Positives = 96/266 (36%), Gaps = 58/266 (21%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE-ELFPKF 104
           +L  +IG G FG+++L T+ Q+ +      E+A+K+     +         +E +++   
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNE------EVAIKLENVKTKHP----QLLYESKIYRIL 59

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
           +    +  +    V      + M     S+ D        KL L  +L    Q+   +  
Sbjct: 60  QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEF 118

Query: 165 LHSIGLLVLNLKPSNLLL---SEHDQLVLGDFG-------------IPYLLLGRSLSDSD 208
           +HS   L  ++KP N L+      +Q+ + DFG             IPY    ++L    
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPY-RENKNL---- 173

Query: 209 MALRLGTPNYMAP------EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG---KS 259
                GT  Y +       EQ         S   D    G  +M  L G  PW G    +
Sbjct: 174 ----TGTARYASVNTHLGIEQ---------SRRDDLESLGYVLMYFLRGSLPWQGLKAGT 220

Query: 260 VEEIYHSVVIKKEKPCIP---SGLPP 282
            ++ Y  +  KK    I     G P 
Sbjct: 221 KKQKYEKISEKKVATSIEALCRGYPT 246

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 27/116 (23%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
           QL +G+  +HS  +L  +LKP+NL ++  D  L +GDFG     L R +          +
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFG-----LARIMDPHYSHKGHLS 182

Query: 216 PN-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
                  Y +P        +   +        D W  GC   EMLTG +  F G  
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAI--------DMWAAGCIFAEMLTG-KTLFAGAH 229

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.8 bits (129), Expect = 7e-08
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI 195
           +         L L  ++ Y  Q+AKG+  L S   +  +L   N+LLSE + + + DFG 
Sbjct: 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG- 238

Query: 196 PYLLLGRSLSDSDMALRLGT---P-NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT- 250
               L R +      +R G    P  +MAPE     V    + ++D W FG  + E+ + 
Sbjct: 239 ----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSL 291

Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           G  P+ G  ++E +   + +  +   P    P +   ++ C+  +   RP  ++++    
Sbjct: 292 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351

Query: 311 S 311
           +
Sbjct: 352 N 352

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 53.9 bits (130), Expect = 8e-08
 Identities = 51/243 (20%), Positives = 91/243 (37%), Gaps = 56/243 (23%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF------------ 93
           +++  +GRG    V+      +   +      A+K+L     D   V             
Sbjct: 56  EVESELGRGATSIVYRCKQKGTQKPY------ALKVL-KKTVDKKIVRTEIGVLLRLSHP 108

Query: 94  -VNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLP 149
            + K +E+F    E+ +            +I + ++   G  G   DRI ++  G     
Sbjct: 109 NIIKLKEIF----ETPT------------EISLVLELVTG--GELFDRIVEK--GYYSER 148

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLLLGRSLSD 206
           D      Q+ + ++ LH  G++  +LKP NLL    +    L + DFG     L + +  
Sbjct: 149 DAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFG-----LSKIVEH 203

Query: 207 SD-MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIY 264
              M    GTP Y APE            E D W  G     +L G +P++ +  +  ++
Sbjct: 204 QVLMKTVCGTPGYCAPEILR---GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260

Query: 265 HSV 267
             +
Sbjct: 261 RRI 263

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 53.4 bits (129), Expect = 9e-08
 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 26/115 (22%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+ +G+  +HS  +L  +LKPSNLLL+    L + DFG     L R            T 
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG-----LARVADPDHDHTGFLTE 190

Query: 217 N-----YMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKS 259
                 Y APE       +   +        D W  GC + EML+  +P F GK 
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSI--------DIWSVGCILAEMLSN-RPIFPGKH 236

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 50/269 (18%), Positives = 90/269 (33%), Gaps = 62/269 (23%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE-ELFPK 103
           K+  RIG G FG ++  T+  +        ++A+K      E   +     + E   +  
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQ------QVAIKF-----EPRRSDAPQLRDEYRTYKL 61

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                 +  ++          + +     S+ D +    G K  +  +     Q+   + 
Sbjct: 62  LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQ 120

Query: 164 DLHSIGLLVLNLKPSNLLL-----SEHDQLVLGDFG-------------IPYLLLGRSLS 205
            +H   L+  ++KP N L+        + + + DFG             IPY    ++L 
Sbjct: 121 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY-REKKNL- 178

Query: 206 DSDMALRLGTPNYMAP------EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-- 257
                   GT  YM+       EQ         S   D    G   M  L G  PW G  
Sbjct: 179 -------SGTARYMSINTHLGREQ---------SRRDDLEALGHVFMYFLRGSLPWQGLK 222

Query: 258 -KSVEEIYHSVVIKKEKPCIP---SGLPP 282
             + ++ Y  +  KK+   +    +G P 
Sbjct: 223 AATNKQKYERIGEKKQSTPLRELCAGFPE 251

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 52.9 bits (128), Expect = 1e-07
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)

Query: 130 YE----GSVGDRIAQQRGGKLPLPDILRYGIQL--AKGISDLHSIGLLVLNLKPSNLLLS 183
           Y     GS+ DR++    G  PL   +R  I    A GI+ LH    +  ++K +N+LL 
Sbjct: 109 YVYMPNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD 167

Query: 184 EHDQLVLGDFGIPYLL--LGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWG 240
           E     + DFG    L       + + M  R+ GT  YMAPE     +RG I+ ++D + 
Sbjct: 168 EAFTAKISDFG----LARASEKFAQTVMTSRIVGTTAYMAPEA----LRGEITPKSDIYS 219

Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVV-----IKKEKPCIPSGLPPAVEN--------- 286
           FG  ++E++TG  P   +  E     ++     I+ E+  I   +   + +         
Sbjct: 220 FGVVLLEIITG-LPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM 276

Query: 287 --VIIGCFEYDLRNRPLMADILHAFES 311
             V   C       RP +  +    + 
Sbjct: 277 YSVASQCLHEKKNKRPDIKKVQQLLQE 303

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 30/143 (20%)

Query: 133 SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS----EHDQL 188
                 A ++  +LP   +     Q+  GI  LH+  +L  +LKP+N+L+     E  ++
Sbjct: 112 FHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV 171

Query: 189 VLGDFGIPYLLLGRSLSDSDMALRLGTPN-----YMAPE------QWEPEVRGPISFETD 237
            + D G       R  +     L    P      Y APE       +   +        D
Sbjct: 172 KIADMG-----FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAI--------D 218

Query: 238 TWGFGCSIMEMLTGIQPWF-GKS 259
            W  GC   E+LT  +P F  + 
Sbjct: 219 IWAIGCIFAELLTS-EPIFHCRQ 240

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 53/201 (26%)

Query: 48  KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKEDCAKVFVNKFEELFPK 103
           +  +G G    V    +  ++ ++      AVK++      ++                 
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEY------AVKIIEKQPGHIRSRV-------------- 57

Query: 104 FRESQ---------SVCWLHGISVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPD- 150
           FRE +         +V  L        +  +  +   G  G     I ++        + 
Sbjct: 58  FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG--GSILSHIHKR--RHFNELEA 113

Query: 151 --ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFG----IPYLLLG 201
             +++    +A  +  LH+ G+   +LKP N+L    +Q   + + DF     I      
Sbjct: 114 SVVVQ---DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170

Query: 202 RSLSDSDMALRLGTPNYMAPE 222
             +S  ++    G+  YMAPE
Sbjct: 171 SPISTPELLTPCGSAEYMAPE 191

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 33/122 (27%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q  + +  LH   ++  +LKPSNLL++ +  L + DFG     L R + +S       T 
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----LARIIDESAADNSEPTG 174

Query: 217 N------------YMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-G 257
                        Y APE      ++   +        D W  GC + E+    +P F G
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAM--------DVWSCGCILAELFLR-RPIFPG 225

Query: 258 KS 259
           + 
Sbjct: 226 RD 227

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 51.3 bits (123), Expect = 5e-07
 Identities = 34/240 (14%), Positives = 70/240 (29%), Gaps = 46/240 (19%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYH--ELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           KLK    R   G ++ A    +          + ++K+     +D        F +   K
Sbjct: 45  KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLD---AKDGRLFNEQNFFQRAAK 101

Query: 104 FRESQSVCWLHGISVIN-------GKIC-----IAMKFYEGSVGDRIAQQRGGKLPLPDI 151
             +      L+   ++        G        + +     S+   +       L    +
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSV 161

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLL--SEHDQLVLGDFG-----------IPYL 198
           L+   +L   +  LH    +  N+   N+ +   +  Q+ L  +G           + Y 
Sbjct: 162 LQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY- 220

Query: 199 LLGRSLSDSDMALRLGTPNYM---APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
                +  S      G   ++     +   P  R       D    G  +++ L G  PW
Sbjct: 221 -----VEGSRSPHE-GDLEFISMDLHKGCGPSRRS------DLQSLGYCMLKWLYGFLPW 268

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 51/240 (21%), Positives = 86/240 (35%), Gaps = 66/240 (27%)

Query: 51  IGRGPFGDVWLATHHQSADDF--------DEYHELA---VKMLLPLKE---DCAKVFVNK 96
           IG+G FG V  A  H+               +H  A   +++L  L++   D     +  
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI-H 163

Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
             E F  FR        H        IC+  +    ++ + I + +     LP + ++  
Sbjct: 164 MLENF-TFRN-------H--------ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAH 207

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLV--LGDFG---------IPYLLLGRSLS 205
            + + +  LH   ++  +LKP N+LL +  +    + DFG           Y+   +S  
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYI---QSRF 264

Query: 206 DSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
                       Y A     PEV          D W  GC + E+LTG  P   G+   +
Sbjct: 265 ------------YRA-----PEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGD 306

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 37/211 (17%)

Query: 130 YE----GSVGDRIAQQRGGKLPLPDILRYGIQL--AKGISDLH-SIGLLVL--NLKPSNL 180
           Y     GSV   + ++   + PL    R  I L  A+G++ LH      ++  ++K +N+
Sbjct: 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165

Query: 181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL--RL-GTPNYMAPEQWEPEVRGPISFETD 237
           LL E  + V+GDFG     L + +   D  +   + GT  ++APE       G  S +TD
Sbjct: 166 LLDEEFEAVVGDFG-----LAKLMDYKDTHVTTAVRGTIGHIAPEY---LSTGKSSEKTD 217

Query: 238 TWGFGCSIMEMLTGIQPW-FGKSVEEIYHSVV-----IKKEK-------PCIPSGLPP-A 283
            +G+G  ++E++TG + +   +   +    ++     + KEK         +        
Sbjct: 218 VFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE 277

Query: 284 VENVI---IGCFEYDLRNRPLMADILHAFES 311
           VE +I   + C +     RP M++++   E 
Sbjct: 278 VEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 48.5 bits (116), Expect = 4e-06
 Identities = 46/238 (19%), Positives = 82/238 (34%), Gaps = 60/238 (25%)

Query: 51  IGRGPFGDVWLATHHQSADDF--------DEYHELA---VKMLLPLKE-DCAKVFVNKFE 98
           +G G FG V L  H  +   +         +Y   A     +L  ++  D     + K+ 
Sbjct: 43  MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
             F  + +       H        +C+  +    S+ + I +       + DI  Y I++
Sbjct: 103 GKF-MYYD-------H--------MCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEI 146

Query: 159 AKGISDLHSIGLLVLNLKPSNLLL--SEHDQLVLGDFGIPYLLLGRSLSDSDMALRL--- 213
            K ++ L  + L   +LKP N+LL     ++ ++    +      +        ++L   
Sbjct: 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206

Query: 214 G--------------TPNYMAPE-----QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
           G              T  Y APE      W           +D W FGC + E+ TG 
Sbjct: 207 GCATFKSDYHGSIINTRQYRAPEVILNLGW--------DVSSDMWSFGCVLAELYTGS 256

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 28/169 (16%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEY-------------HELAVKMLLPLKEDCAKV 92
            L  +IG G FG ++LA      +    +              EL     +  K+   K 
Sbjct: 40  VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKW 99

Query: 93  FVNKFEEL--FPKFRESQSVCWLHGISVINGKI--CIAMKFYEGSVGDRIAQQRGGKLPL 148
              K  +    P         +  G++   G+    + M+     +       + G    
Sbjct: 100 IERKQLDYLGIPL-------FYGSGLTEFKGRSYRFMVMERLGIDLQKIS--GQNGTFKK 150

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL--SEHDQLVLGDFGI 195
             +L+ GI++   +  +H    +  ++K +NLLL     DQ+ L D+G+
Sbjct: 151 STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGL 199

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 48.1 bits (115), Expect = 6e-06
 Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 28/125 (22%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           QL K I  LHS GLL  ++KPSN+LL+    + + DFG     L RS  +          
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFG-----LSRSFVNIRRVTNNIPL 171

Query: 217 NYMAPEQWEPEVRGPI---------------------SFETDTWGFGCSIMEMLTGIQPW 255
           +     +   + +  +                     +   D W  GC + E+L G +P 
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230

Query: 256 F-GKS 259
           F G S
Sbjct: 231 FPGSS 235

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 21/167 (12%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKFEELFPKF 104
           K+   IG+G FG ++LA    S++         VK+      D   +F   KF +   K 
Sbjct: 38  KVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVE---PSDNGPLFTELKFYQRAAKP 93

Query: 105 RESQSVCWLHGISVI-------NGKICIAMKFYEGSVGDR-------IAQQRGGKLPLPD 150
            + Q       +  +       +G      K Y   + DR       I +    +     
Sbjct: 94  EQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKT 153

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS--EHDQLVLGDFGI 195
           +L+  +++   +  +H    +  ++K SNLLL+    DQ+ L D+G+
Sbjct: 154 VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGL 200

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 27/121 (22%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
            L  G + +H  G++  +LKP+N LL++   + + DFG     L R+++       +   
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFG-----LARTINSEKDTNIVNDL 191

Query: 217 NYMAPEQWEPEVRGPI----------------------SFETDTWGFGCSIMEMLTGIQP 254
                     +                           +   D W  GC   E+L  +Q 
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251

Query: 255 W 255
            
Sbjct: 252 H 252

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 29/174 (16%), Positives = 50/174 (28%), Gaps = 42/174 (24%)

Query: 120 NGK-ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLV-LNLKP 177
           NG  IC+  +     +   I +     LPLP + +   Q+ +G+  LH+   ++  ++KP
Sbjct: 116 NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 175

Query: 178 SNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE------------ 225
            N+LLS ++Q +                    +     P                     
Sbjct: 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235

Query: 226 --------------------------PEVR--GPISFETDTWGFGCSIMEMLTG 251
                                      EV      +   D W   C   E+ TG
Sbjct: 236 KIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 3e-05
 Identities = 68/487 (13%), Positives = 121/487 (24%), Gaps = 182/487 (37%)

Query: 64  HHQSADDFD-EYHELAVKMLLPLKE-------DCA-------KVFVNK-FEELFPKFRES 107
           HH    DF+   H+   K +L + E       DC         +   +  + +       
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 108 QSVCWLHGISVINGKICIAMKFYEGS-------VGDRIAQQRGGKLPLPDILRYGIQLAK 160
                L    +   +  +  KF E         +   I  ++  + P      Y  Q  +
Sbjct: 62  SGTLRLFWTLLSKQE-EMVQKFVEEVLRINYKFLMSPIKTEQ--RQPSMMTRMYIEQRDR 118

Query: 161 GISD--------------LHSIGLLVLNLKPSNLL-----------------LSEHDQLV 189
             +D                 +   +L L+P+  +                    +    
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGT------PNYMAP-----------EQWEPEVRGPI 232
             DF I +L L    S   +   L        PN+ +               + E+R  +
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 233 SFET---------DTW--------GFGCSIMEMLTGIQPWFGKSV------EEIYHSVVI 269
             +          +             C I+ + T       K V          H  + 
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-LTTR-----FKQVTDFLSAATTTHISLD 292

Query: 270 KKEKP---------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
                               C P  LP  V               P    I+        
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN-----------PRRLSIIAESIRDGL 341

Query: 315 AVYNDGEWTGLGSRALTDT--SSVKGYTAWYPLKDHLQVGDTVRSRKPLNARK------- 365
           A ++   W  +    LT    SS+          + L         +P   RK       
Sbjct: 342 ATWD--NWKHVNCDKLTTIIESSL----------NVL---------EPAEYRKMFDRLSV 380

Query: 366 -PQTVDVPAGT-----------VVGLDADTDRNSSVLVK--------IPGLHNPLRVQ-- 403
            P +  +P               V +  +     S++ K        IP ++  L+V+  
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440

Query: 404 -ESSLER 409
            E +L R
Sbjct: 441 NEYALHR 447

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 34/151 (22%)

Query: 123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL 182
           +CIA +    +  + + +      PLP +     QL   +  LH   L   +LKP N+L 
Sbjct: 97  MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILF 156

Query: 183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRL---G--------------TPNYMAPE--- 222
              +   L +         +S+ ++   +R+   G              T +Y  PE   
Sbjct: 157 VNSEFETLYNEHKSC--EEKSVKNTS--IRVADFGSATFDHEHHTTIVATRHYRPPEVIL 212

Query: 223 --QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
              W        +   D W  GC + E   G
Sbjct: 213 ELGW--------AQPCDVWSIGCILFEYYRG 235

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 44.4 bits (105), Expect = 9e-05
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 32/125 (25%)

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS---DSDMALRL 213
            L  G+  +HS G+L  +LKP+N L+++   + + DFG     L R++    + +  L +
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFG-----LARTVDYPENGNSQLPI 218

Query: 214 GTPNYMAPEQWEPEVRGPISFET------------------------DTWGFGCSIMEML 249
                       P  +      T                        D W  GC   E+L
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278

Query: 250 TGIQP 254
             I+ 
Sbjct: 279 NMIKE 283

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 26/160 (16%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE-ELFPKFR 105
               +G G  G V    + ++ + F      A+KML    +DC K    + E EL  +  
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKF------ALKML----QDCPKA---RREVELHWRAS 68

Query: 106 ESQSVCWLHGI----SVINGKICIAMKFYEGSVG---DRIAQQRGGKLPLPDILRYGIQL 158
           +   +  +  +          + I M+  +G  G    RI  +        +       +
Sbjct: 69  QCPHIVRIVDVYENLYAGRKCLLIVMECLDG--GELFSRIQDRGDQAFTEREASEIMKSI 126

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGI 195
            + I  LHSI +   ++KP NLL +       L L DFG 
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 54/239 (22%), Positives = 81/239 (33%), Gaps = 66/239 (27%)

Query: 51  IGRGPFGDVWLATHHQSADDF---------DEYHELA---VKMLLPLKE---DCAKVFVN 95
           +G G FG V     H++             D Y E A   +++L  L     +     V 
Sbjct: 22  LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV- 80

Query: 96  KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYG 155
           +  E F +          H        ICI  +    S  D I +       L  I +  
Sbjct: 81  QMLEWF-EHHG-------H--------ICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124

Query: 156 IQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-- 213
            Q+ K ++ LHS  L   +LKP N+L  + D     +  I      R+L + D  +++  
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE--RTLINPD--IKVVD 180

Query: 214 -G--------------TPNYMAPE-----QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
            G              T +Y APE      W        S   D W  GC ++E   G 
Sbjct: 181 FGSATYDDEHHSTLVSTRHYRAPEVILALGW--------SQPCDVWSIGCILIEYYLGF 231

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 46/231 (19%)

Query: 51  IGRGPFGDVWLATHHQSADDF--------DEYHELA---VKMLLPLKEDCA--KVFVNKF 97
           IG+G FG V  A      +            +   A   V++L  + +     K ++   
Sbjct: 62  IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
           +  F  FR        H        +C+  +    ++ D +       + L    ++  Q
Sbjct: 122 KRHF-MFRN-------H--------LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165

Query: 158 LAKGISDLHSIGLLVL--NLKPSNLLL--SEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
           +   +  L +  L ++  +LKP N+LL   +   + + DFG              +   +
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------SSCQLGQRIYQYI 219

Query: 214 GTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
            +  Y +PE     + G P     D W  GC ++EM TG +P F G +  +
Sbjct: 220 QSRFYRSPEV----LLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGANEVD 265

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 38/211 (18%), Positives = 82/211 (38%), Gaps = 43/211 (20%)

Query: 130 YE----GSVGDRIAQQRGGKLPLPDILRYGIQL--AKGISDLHSIGLLVLNLKPSNLLLS 183
           Y+    G++   +       + +    R  I +  A+G+  LH+  ++  ++K  N+LL 
Sbjct: 114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD 173

Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSD--------MALRLGTPNYMAPEQWEPEVRGPISFE 235
           E+    + DFG     + +  ++ D             GT  Y+ PE +   ++G ++ +
Sbjct: 174 ENFVPKITDFG-----ISKKGTELDQTHLSTVVK----GTLGYIDPEYF---IKGRLTEK 221

Query: 236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV------IKKEK------PCIPSGLPPA 283
           +D + FG  + E+L   +    +S+     ++           +      P +   + P 
Sbjct: 222 SDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE 280

Query: 284 ----VENVIIGCFEYDLRNRPLMADILHAFE 310
                 +  + C      +RP M D+L   E
Sbjct: 281 SLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	632
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.83
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.75
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.59
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.11
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.92
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.81
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.62
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.22
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.1
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.98
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.8
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.7
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.68
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.49
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.39
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.08
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.93
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.72
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.44
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.39
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.38
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.27
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.2
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	94.96
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.78
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	94.71
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.69
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	94.16
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.88
3mes_A	424	Choline kinase; malaria, structural genomics, stru	89.4
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.88

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.8e-56  Score=466.22  Aligned_cols=274  Identities=19%  Similarity=0.344  Sum_probs=233.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+++|++++.||+|+||+||+|+++.++      +.||||++.+..  .......+.++..++..+ +||||+.+++++
T Consensus        29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~------~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~  101 (311)
T 4aw0_A           29 KRPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTF  101 (311)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             CCccccEEEEEEecccCeEEEEEEECCCC------CEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence            34578999999999999999999998776      489999997532  111123344445666665 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ++++.+|||||||+ |+|.+++.+.  +.+++.+++.|+.||+.||+|||+++|+||||||+||||+.+|++||+|||+|
T Consensus       102 ~~~~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla  179 (311)
T 4aw0_A          102 QDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA  179 (311)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCc
Confidence            99999999999998 5888888654  58999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      +.+.... ......+.+||+.|||||++.+.   .|+.++|||||||+||||++|+.||.+.+..+++..+..  ..+.+
T Consensus       180 ~~~~~~~-~~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~--~~~~~  253 (311)
T 4aw0_A          180 KVLSPES-KQARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK--LEYDF  253 (311)
T ss_dssp             EECCTTT-TCCCBCCCCSCGGGCCHHHHHHS---CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCC
T ss_pred             eecCCCC-CcccccCcccCcccCCHHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCC
Confidence            9764322 12234567999999999999754   688999999999999999999999999999998888774  45678


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccc
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSR  328 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~  328 (632)
                      |..+++++++||.+||++||++|||++|++..-.-..|+||.+.+|+.+..+
T Consensus       254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~  305 (311)
T 4aw0_A          254 PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ  305 (311)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS
T ss_pred             CcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCC
Confidence            8999999999999999999999999999876544456899999999988654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=8.6e-56  Score=463.97  Aligned_cols=279  Identities=25%  Similarity=0.399  Sum_probs=230.4

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ...+++++|++++.||+|+||+||+|++..+.   ..++.||||++++...  ..... ...+..++..+ +||||+.++
T Consensus        18 ~~~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~-~~~E~~il~~l-~HpnIv~l~   92 (304)
T 3ubd_A           18 HEKADPSQFELLKVLGQGSFGKVFLVKKISGS---DARQLYAMKVLKKATLKVRDRVR-TKMERDILVEV-NHPFIVKLH   92 (304)
T ss_dssp             CCCCCGGGEEEEEEEECGGGCEEEEEEECSST---TTTCEEEEEEEESEEEEEEECC-------CCCCCC-CCTTEECEE
T ss_pred             cccCCccccEEEEEEecCCCeEEEEEEEccCC---CCCEEEEEEEEehHHcChHHHHH-HHHHHHHHHHC-CCCCCCeEE
Confidence            44567889999999999999999999986433   2346899999976321  11122 22333445554 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++.+++.+|||||||+ |+|.+++.+.  +.+++.+++.|+.||+.||+|||+++|+||||||+|||++.+|.+||+||
T Consensus        93 ~~~~~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DF  170 (304)
T 3ubd_A           93 YAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF  170 (304)
T ss_dssp             EEEEETTEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESS
T ss_pred             EEEEECCEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEeccc
Confidence            99999999999999998 6888888654  58999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+|+.....   .....+.+||+.|||||++.+.   .|+.++|||||||+||||++|+.||.+.+..+++..+..  ..
T Consensus       171 Gla~~~~~~---~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~  242 (304)
T 3ubd_A          171 GLSKESIDH---EKKAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK--AK  242 (304)
T ss_dssp             EEEEC--------CCCCSCCCCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CC
T ss_pred             ccceeccCC---CccccccccCcccCCHHHhccC---CCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc--CC
Confidence            999865332   1233457899999999999754   688999999999999999999999999999888888763  45


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                      +.+|..+|+++.+||.+||++||++|||+     +|+++      +++|.+.+|+.+..+.+.+|+.|
T Consensus       243 ~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~------Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          243 LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR------HSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc------CccccCCCHHHHHhCCCCcCcCC
Confidence            67889999999999999999999999984     55554      88999999999999988888654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3e-53  Score=444.02  Aligned_cols=269  Identities=22%  Similarity=0.363  Sum_probs=223.3

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|++++|.+.++||+|+||+||+|++..... ...+..||||+++.......+.+.+ +..++.++ +||||+.+++++
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~f~~-E~~il~~l-~HpnIV~l~g~~   84 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCP-EQDKILVAVKTLKDASDNARKDFHR-EAELLTNL-QHEHIVKFYGVC   84 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC-----CEEEEEEEECSCCHHHHHHHHH-HHHHHTTC-CCTTBCCEEEEE
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCccc-CCCCEEEEEEEeCCCChHHHHHHHH-HHHHHHhC-CCCCCccEEEEE
Confidence            35788999999999999999999999864321 1234689999998766555555544 44566666 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR-----------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH  185 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~-----------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~  185 (632)
                      .+++.+|||||||+ |+|.+++....           ...+++.+++.++.||+.||+|||+++||||||||+||||+++
T Consensus        85 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~  164 (299)
T 4asz_A           85 VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN  164 (299)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC
Confidence            99999999999998 78988886531           3579999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHH
Q 006772          186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY  264 (632)
Q Consensus       186 g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~  264 (632)
                      +.+||+|||+|+........ .......||+.|||||++.+   +.|+.++|||||||+||||+| |+.||.+.+..++.
T Consensus       165 ~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~---~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  240 (299)
T 4asz_A          165 LLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMY---RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI  240 (299)
T ss_dssp             GCEEECCCSCHHHHTGGGCE-EETTTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             CcEEECCcccceecCCCCce-eecCceecChhhcCHHHHcC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            99999999999865332111 11233468999999999974   479999999999999999999 99999999998888


Q ss_pred             HHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       265 ~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+.. ...+..|..+|+++.+||.+||+.||++|||+.+|+..|+.+..
T Consensus       241 ~~i~~-~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          241 ECITQ-GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             HHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHc-CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            77764 45667889999999999999999999999999999999887653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.9e-53  Score=452.58  Aligned_cols=253  Identities=21%  Similarity=0.373  Sum_probs=211.1

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +.++|+++++||+|+||+||+|+++.++      +.||||++.+... ....+.+.++..++..+ +||||+.+++++.+
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~   94 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDG------RQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEE   94 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTC------CEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCC------CEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEE
Confidence            3579999999999999999999998766      4899999976432 22223334444566665 69999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+|||||||+ |+|.+++...++..+++.+++.|+.||+.||+|||+++||||||||+||||+.+|.+||+|||+|+.
T Consensus        95 ~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  174 (350)
T 4b9d_A           95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV  174 (350)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEccccccee
Confidence            999999999998 6899999876667789999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      +...   .......+||+.|||||++.+.   .|+.++|||||||+||||++|+.||.+.+..+++..+... ..+.++.
T Consensus       175 ~~~~---~~~~~~~~GT~~YmAPE~l~~~---~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-~~~~~~~  247 (350)
T 4b9d_A          175 LNST---VELARACIGTPYYLSPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG-SFPPVSL  247 (350)
T ss_dssp             CCHH---HHHHHHHHSCCTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-CCCCCCT
T ss_pred             ecCC---cccccccCCCccccCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC-CCCCCCc
Confidence            5321   1122456899999999999754   6899999999999999999999999999998888887653 4456778


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+|+++.+||.+||++||++|||+.|+++
T Consensus       248 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          248 HYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999999999999986

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=9.9e-53  Score=441.42  Aligned_cols=266  Identities=23%  Similarity=0.394  Sum_probs=212.3

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      .+.|+.++|++.++||+|+||+||+|+++.         .||||+++...  ....+.+ .++..++.++ +||||+.++
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---------~vAvK~~~~~~~~~~~~~~f-~~E~~il~~l-~HpNIV~l~   98 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG---------DVAVKILKVVDPTPEQFQAF-RNEVAVLRKT-RHVNILLFM   98 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESSS---------EEEEEECCCSSCCHHHHHHH-HHHHHHHTTC-CCTTBCCEE
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEECC---------cEEEEEEEecCCCHHHHHHH-HHHHHHHHhC-CCCCEeeEE
Confidence            345899999999999999999999998542         59999987543  2223333 3444555665 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++. ++.+|||||||+ |+|.+++... ..++++.+++.++.||+.||+|||+++||||||||+||||++++.+||+||
T Consensus        99 g~~~-~~~~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DF  176 (307)
T 3omv_A           99 GYMT-KDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF  176 (307)
T ss_dssp             EEEC-SSSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCC
T ss_pred             EEEE-CCeEEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeec
Confidence            9875 467899999998 6888877643 468999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-c
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-E  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~  272 (632)
                      |+|+...... ........+||+.|||||++.+...++|+.++|||||||+||||+||+.||.+.+.......++... .
T Consensus       177 Gla~~~~~~~-~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~  255 (307)
T 3omv_A          177 GLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA  255 (307)
T ss_dssp             SSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCC
T ss_pred             cCceecccCC-cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC
Confidence            9998653221 1223345689999999999976556679999999999999999999999999876554433333332 3


Q ss_pred             CC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          273 KP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       273 ~p---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      .|   ..+..+|+++.+||.+||+.||++|||+.||++.|+.+++.+
T Consensus       256 ~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            33   345789999999999999999999999999999999887654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.1e-52  Score=443.24  Aligned_cols=269  Identities=23%  Similarity=0.391  Sum_probs=218.9

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|.+.++||+|+||+||+|+++.... ...++.||||+++.......+.+.++ ..++.++ +||||+.+++++
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~f~~E-~~il~~l-~HpnIV~l~g~~  112 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLP-EQDKMLVAVKALKEASESARQDFQRE-AELLTML-QHQHIVRFFGVC  112 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC----CEEEEEEEESCCSHHHHHHHHHH-HHHHTTC-CCTTBCCEEEEE
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCccc-CCCCeEEEEEEECcCCHHHHHHHHHH-HHHHHhC-CCCCCCcEEEEE
Confidence            45788999999999999999999999864321 12346899999987665555555444 4556665 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR-------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~-------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                      .+++.+|||||||+ |+|.+++....             .+++++.+++.++.||+.||+|||+++||||||||+||||+
T Consensus       113 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~  192 (329)
T 4aoj_A          113 TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG  192 (329)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence            99999999999998 78888886532             24699999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHH
Q 006772          184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEE  262 (632)
Q Consensus       184 ~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~e  262 (632)
                      +++.+||+|||+|+....... .......+||+.|||||++.+   ..|+.++|||||||+||||+| |+.||.+.+..+
T Consensus       193 ~~~~~Ki~DFGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~---~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~  268 (329)
T 4aoj_A          193 QGLVVKIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILY---RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE  268 (329)
T ss_dssp             TTTEEEECCCC-----------------CCCCGGGCCHHHHTT---CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH
T ss_pred             CCCcEEEcccccceeccCCCc-ceecCcccccccccChhhhcC---CCCCccccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999986533221 112234579999999999974   478999999999999999999 999999999888


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       263 i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +...+.. ..++..|..+|+++.+||.+||+.||++|||+.||++.|+.+..
T Consensus       269 ~~~~i~~-g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          269 AIDCITQ-GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHHHHHH-TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHc-CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            8877654 45677899999999999999999999999999999999988764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.8e-53  Score=444.22  Aligned_cols=268  Identities=20%  Similarity=0.324  Sum_probs=220.2

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.+++++.++||+|+||+||+|.+..... ...++.||||+++........+.+.++..++.++ +||||+.+++++
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~-~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~   98 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAP-GEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVV   98 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC--------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCcc-CCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEE
Confidence            34778899999999999999999999754221 1334689999997644333333334444566665 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      ..++.+|||||||+ |+|.+++....              ...+++.+++.++.|||.||+|||+++||||||||+||||
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence            99999999999998 78999886432              2468999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      ++++.+||+|||+|+....... .......+||+.|||||++.+   +.|+.++|||||||+||||+| |..||.+.+..
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~---~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~  254 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADY-YKLLGNSLLPIRWMAPEAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ  254 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGC-BCSSSSSCBCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH
T ss_pred             CCCCCEEECCcccceeccCCCc-eeEecccccCCcccCHHHHhC---CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999987543221 122344679999999999974   479999999999999999998 89999999998


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ++...+.. ...++.|..+|+++.+||.+||+.||++||++.||++.|+.+
T Consensus       255 ~~~~~i~~-~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          255 DVVEMIRN-RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHc-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            88877764 455667899999999999999999999999999999999764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.2e-52  Score=449.13  Aligned_cols=270  Identities=21%  Similarity=0.339  Sum_probs=224.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|++++|++.+.||+|+||+||+|.+...+. ....+.||||+++..........+..+..++.++.|||||+.++++|.
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~-~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSS-TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCc-ccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            4888999999999999999999999876543 234468999999765544333334445567788889999999999987


Q ss_pred             E-CCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          119 I-NGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       119 ~-~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      . ++.+|||||||+ |+|.+++....              ...+++.+++.|+.|||.||+|||+++||||||||+|||+
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl  218 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  218 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence            6 467999999998 68888886532              2458999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      ++++.+||+|||+|+.+.... ........+||+.|||||++.+   ..|+.++|||||||+||||+| |..||.+.+..
T Consensus       219 ~~~~~vKi~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~---~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~  294 (353)
T 4ase_A          219 SEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  294 (353)
T ss_dssp             CGGGCEEECCCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             CCCCCEEECcchhhhhcccCC-CceeeccccccccccCHHHHhc---CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999998653321 1122334679999999999974   479999999999999999998 99999997755


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +.+..++....++..|..+|+++.++|.+||+.||++|||+.+|++.|+.+.
T Consensus       295 ~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            5444555566778889999999999999999999999999999999988765

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.1e-52  Score=431.16  Aligned_cols=248  Identities=21%  Similarity=0.336  Sum_probs=200.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||+||+|+++.++      +.||||++.+...  ......+.++..+++.+ +||||+.+++++.++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~   85 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTG------QKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSK   85 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTC------CEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEEC
Confidence            58999999999999999999988766      4899999976432  12222334444556665 699999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +.+||||||++|+|.+++.+  .+++++.+++.++.||+.||+|||+++|+||||||+|||++.++++||+|||+|+...
T Consensus        86 ~~~~ivmEy~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           86 DEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             SEEEEEEECCCEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             CEEEEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            99999999999999999865  3589999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ..    ....+.+||+.|||||++.+..  .++.++|||||||++|||++|+.||.+.+..+++..+.  ...+.+|..+
T Consensus       164 ~~----~~~~~~~GT~~Y~APE~~~~~~--y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~--~~~~~~p~~~  235 (275)
T 3hyh_A          164 DG----NFLKTSCGSPNYAAPEVISGKL--YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFL  235 (275)
T ss_dssp             ---------------CTTSCHHHHSSSS--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTS
T ss_pred             CC----CccCCeeECcccCChhhhcCCC--CCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCC
Confidence            22    2234578999999999997542  24679999999999999999999999999888887776  3456678999


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |+++.+||.+||++||++|||+.|+++
T Consensus       236 s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          236 SPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            999999999999999999999999886

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2e-52  Score=443.93  Aligned_cols=257  Identities=25%  Similarity=0.302  Sum_probs=212.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .+.+.|++.++||+|+||+||+|+++.++      +.||||+++.....      .++..++..+ +||||+.+++++.+
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g------~~vAiK~i~~~~~~------~~E~~il~~l-~HpnIV~l~~~~~~  121 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTG------FQCAVKKVRLEVFR------VEELVACAGL-SSPRIVPLYGAVRE  121 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCC------THHHHTTTTC-CCTTBCCEEEEEEE
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCCC------CEEEEEEECHHHhH------HHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            34578999999999999999999998776      48999999754321      2233455554 79999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCce
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPY  197 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGlak  197 (632)
                      ++.+|||||||+ |+|.+++.+.  +.+++.+++.|+.||+.||+|||+++||||||||+||||+.+| ++||+|||+|+
T Consensus       122 ~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~  199 (336)
T 4g3f_A          122 GPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL  199 (336)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred             CCEEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence            999999999998 6888888654  5899999999999999999999999999999999999999988 69999999998


Q ss_pred             eccCCCCCCC--ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-C
Q 006772          198 LLLGRSLSDS--DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-P  274 (632)
Q Consensus       198 ~~~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-p  274 (632)
                      .+........  .....+||+.|||||++.+.   +|+.++|||||||+||||++|+.||.+.+..+++..+...... .
T Consensus       200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~  276 (336)
T 4g3f_A          200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK---PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR  276 (336)
T ss_dssp             EC------------CCCCCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG
T ss_pred             EccCCCcccceecCCccccCccccCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch
Confidence            7644322211  22346899999999999854   6899999999999999999999999988776666666543322 2


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+|+.+|+++.+||.+||++||.+|||+.||++.|.....
T Consensus       277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999988776543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=5.3e-52  Score=442.19  Aligned_cols=247  Identities=22%  Similarity=0.346  Sum_probs=209.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|++.++||+|+||+||+|+++.++      +.||||++........+.+ .++..++..+ +||||+.+++++.+++.
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg------~~vAiK~i~~~~~~~~~~~-~~Ei~il~~l-~HpnIV~l~~~~~~~~~  145 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSG------KLVAVKKMDLRKQQRRELL-FNEVVIMRDY-QHENVVEMYNSYLVGDE  145 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEGGGCSSGGGG-HHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCC------CEEEEEEEecCchhHHHHH-HHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            57999999999999999999998776      4899999975433333333 3344556665 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +|||||||+| +|.+++.+   +.+++.+++.|+.||+.||+|||+++||||||||+||||+.+|.+||+|||+|+.+..
T Consensus       146 ~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             EEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            9999999995 77776643   4799999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~~  279 (632)
                      .   .....+.+||+.|||||++.+.   +|+.++|||||||++|||++|+.||.+.+..+++..+... ..+.  .+..
T Consensus       223 ~---~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~-~~~~~~~~~~  295 (346)
T 4fih_A          223 E---VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHK  295 (346)
T ss_dssp             S---SCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-SCCCCSCGGG
T ss_pred             C---CCcccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC-CCCCCCcccc
Confidence            2   1233567899999999999744   6899999999999999999999999999988887776532 2222  3457


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|+++.+||.+||++||++|||+.|+++
T Consensus       296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          296 VSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            8999999999999999999999999876

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=9.7e-51  Score=423.12  Aligned_cols=247  Identities=22%  Similarity=0.342  Sum_probs=202.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      +-|++.++||+|+||+||+|.++.++      ..||||++..... ....+.+.++..++.++ +||||+.+++++..  
T Consensus        26 r~~~~~~~iG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~   98 (290)
T 3fpq_A           26 RFLKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEE
T ss_pred             ceEEeeeEEecCcCcEEEEEEECCCC------eEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeecc
Confidence            33588999999999999999998766      4899999965322 22223334444556665 79999999999865  


Q ss_pred             --CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEec-CCcEEEEec
Q 006772          120 --NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLSE-HDQLVLGDF  193 (632)
Q Consensus       120 --~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld~-~g~vkL~DF  193 (632)
                        ++.+|||||||+ |+|.+++.+.  +.+++..++.|+.||+.||+|||+++  ||||||||+||||+. +|.+||+||
T Consensus        99 ~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DF  176 (290)
T 3fpq_A           99 KGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDL  176 (290)
T ss_dssp             TTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred             CCCcEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeC
Confidence              356899999998 6888888654  58999999999999999999999998  999999999999984 799999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~~~~  272 (632)
                      |+|+....     ....+.+||+.|||||++.    ++|+.++|||||||+||||+||+.||.+.+ ..+++..+.....
T Consensus       177 Gla~~~~~-----~~~~~~~GTp~YmAPE~~~----~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~  247 (290)
T 3fpq_A          177 GLATLKRA-----SFAKAVIGTPEFMAPEMYE----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK  247 (290)
T ss_dssp             TGGGGCCT-----TSBEESCSSCCCCCGGGGG----TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC
T ss_pred             cCCEeCCC-----CccCCcccCccccCHHHcC----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC
Confidence            99975322     2334578999999999985    358999999999999999999999998755 4555555544334


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++..+++++.+||.+||++||++|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            44566788999999999999999999999999886

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=7.6e-51  Score=443.64  Aligned_cols=248  Identities=21%  Similarity=0.340  Sum_probs=210.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|++.++||+|+||.||+|+++.++      +.||||++........+.+. ++..++..+ +||||+.+++++.+++.
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg------~~vAiK~i~~~~~~~~~~~~-~Ei~il~~l-~HpnIV~l~~~~~~~~~  222 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSG------KLVAVKKMDLRKQQRRELLF-NEVVIMRDY-QHENVVEMYNSYLVGDE  222 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEESTTCSSGGGHH-HHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCC------CEEEEEEEeccchhHHHHHH-HHHHHHHhC-CCCCCCceEEEEEECCE
Confidence            56999999999999999999998776      48999999765443333333 444556665 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +|||||||+| +|.+++..   +.+++.+++.|+.||+.||+|||+++||||||||+||||+.+|.+||+|||+|+.+..
T Consensus       223 ~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            9999999995 77776643   4799999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-CCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-KPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-~p~~p~~l  280 (632)
                      .   .....+.+||+.|||||++.+.   .|+.++|||||||++|||++|+.||.+.+..+++..+..... ....+..+
T Consensus       300 ~---~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~  373 (423)
T 4fie_A          300 E---VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV  373 (423)
T ss_dssp             S---CCCBCCCEECTTTCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSS
T ss_pred             C---CccccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccC
Confidence            2   1233567899999999999744   689999999999999999999999999998888877654321 22344679


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |+++.+||.+||++||++|||+.|+++
T Consensus       374 s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          374 SPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999999999876

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.7e-50  Score=459.15  Aligned_cols=279  Identities=18%  Similarity=0.316  Sum_probs=230.8

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhh--hccCCCceeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFP--KFRESQSVCW  112 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~--~l~~h~~I~~  112 (632)
                      ...++.++|++++.||+|+||+||+|+++.++      +.||||++.+...  ........++..++.  ...+||||+.
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~tg------~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~  256 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC  256 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECCCC------CEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeE
Confidence            34567789999999999999999999998776      4899999965321  111222222222222  2347999999


Q ss_pred             eeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          113 LHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +++++++++.+|||||||+ |+|.+++.+.  +.|++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+
T Consensus       257 l~~~f~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~  334 (689)
T 3v5w_A          257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS  334 (689)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EEEEEEECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEec
Confidence            9999999999999999998 6888888654  589999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---CHHHHHHHHH
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---SVEEIYHSVV  268 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---~~~ei~~~i~  268 (632)
                      |||+|+.+..     ....+.+||+.|||||++...  ..|+.++|||||||+||||++|..||.+.   +..++...+.
T Consensus       335 DFGlA~~~~~-----~~~~t~~GTp~YmAPEvl~~~--~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~  407 (689)
T 3v5w_A          335 DLGLACDFSK-----KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL  407 (689)
T ss_dssp             CCTTCEECSS-----CCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH
T ss_pred             ccceeeecCC-----CCCCCccCCcCccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Confidence            9999987533     233557999999999998632  25889999999999999999999999864   3344554444


Q ss_pred             hhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       269 ~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                        ...+.+|..+|+++++||.+||++||.+|++     +.||++      |+||.+++|+.+..+.+.+|+.|..
T Consensus       408 --~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~------HpfF~~idW~~l~~~~~~pP~~P~~  474 (689)
T 3v5w_A          408 --TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE------SPFFRSLDWQMVFLQKYPPPLIPPR  474 (689)
T ss_dssp             --HCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT------SGGGTTCCHHHHHTTCSCCSCCCCT
T ss_pred             --CCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc------CccccCCCHHHHHcCCCCcCccCCC
Confidence              4566788999999999999999999999997     577665      8999999999999999999987753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.4e-50  Score=418.23  Aligned_cols=261  Identities=22%  Similarity=0.309  Sum_probs=189.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      ++|++++.||+|+||+||+|+++.++      +.||||+++........+.+.++..++.++ +||||+.+++++...+ 
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~   77 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDD------CNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNT   77 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTC------CEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC-
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCC------CEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCc
Confidence            47999999999999999999998766      489999997654443333344455666666 7999999999987543 


Q ss_pred             -----------EEEEEEecCC-CCHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          122 -----------KICIAMKFYE-GSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       122 -----------~l~LVmEy~~-GsL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                                 .+|||||||+ |+|.+++..... ...++..++.|+.||+.||+|||+++|+||||||+|||++.+|.+
T Consensus        78 ~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~v  157 (299)
T 4g31_A           78 TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV  157 (299)
T ss_dssp             ---------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             cccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcE
Confidence                       4799999998 688888764321 234566789999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCCCC---------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC
Q 006772          189 VLGDFGIPYLLLGRSLSD---------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS  259 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~---------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~  259 (632)
                      ||+|||+|+.........         ......+||+.|||||++.+.   .|+.++|||||||++|||++   ||.+..
T Consensus       158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyell~---Pf~~~~  231 (299)
T 4g31_A          158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN---SYSHKVDIFSLGLILFELLY---PFSTQM  231 (299)
T ss_dssp             EECCCCCC--------------------------CCCTTSCHHHHTTC---CCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred             EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC---CCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence            999999998764322111         122346899999999999754   68999999999999999996   886533


Q ss_pred             HH-HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          260 VE-EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       260 ~~-ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      .. .....+. ....|+.+...++++.+||.+||+.||++|||+.|+++      ++++.+.+|.
T Consensus       232 ~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~------h~~~~~~~~p  289 (299)
T 4g31_A          232 ERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE------NAVFEDLDFP  289 (299)
T ss_dssp             HHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT------SGGGCCC---
T ss_pred             HHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc------CHhhCCCCCC
Confidence            21 2222222 12222222345678899999999999999999999876      6777777664

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=6.4e-49  Score=411.59  Aligned_cols=258  Identities=20%  Similarity=0.309  Sum_probs=198.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      ++|.+.++||+|+||+||+|+++.        +.||||++....   ...+..+.+.......+||||+.+++++..++ 
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g--------~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~   71 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRG--------EEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG   71 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT--------EEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECC--------EEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC
Confidence            469999999999999999998742        489999996432   23333332222223347999999999998653 


Q ss_pred             ---EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceeeeeeCCeEEEecCCcEE
Q 006772          122 ---KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI--------GLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       122 ---~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~--------~IvHRDLKP~NILld~~g~vk  189 (632)
                         .+|||||||+ |+|.+++..   ..+++..++.++.|++.||+|||++        +||||||||+||||+.++.+|
T Consensus        72 ~~~~~~lV~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K  148 (303)
T 3hmm_A           72 TWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  148 (303)
T ss_dssp             SSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CceEEEEEecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence               6899999998 688888754   3799999999999999999999987        999999999999999999999


Q ss_pred             EEecCCceeccCCCCC-CCccccccCCCccCCccccCCCC---CCCCCcccccchhHHHHHHHHhCCCCCC---------
Q 006772          190 LGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEV---RGPISFETDTWGFGCSIMEMLTGIQPWF---------  256 (632)
Q Consensus       190 L~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~---~g~~t~ksDvwSlGvvL~EmltG~~PF~---------  256 (632)
                      |+|||+|+........ .......+||+.|||||++.+..   .+.++.++|||||||+||||+||..||.         
T Consensus       149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~  228 (303)
T 3hmm_A          149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  228 (303)
T ss_dssp             ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred             EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence            9999999876443221 12223468999999999997542   1246789999999999999999976553         


Q ss_pred             -CC-----CHHHHHHHHHhhccCCCCCCC-----CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          257 -GK-----SVEEIYHSVVIKKEKPCIPSG-----LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       257 -~~-----~~~ei~~~i~~~~~~p~~p~~-----lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                       +.     ...++...+.....+|.+|..     ++..+.+||.+||+.||++|||+.||++.|+.+..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence             21     234444445545556666643     33578999999999999999999999999987753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.3e-48  Score=421.05  Aligned_cols=259  Identities=22%  Similarity=0.295  Sum_probs=209.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      ++|++++.||+|+||.||+|+++.++      +.||||++++...  ...+.+.+ +..++..+ +||||+.+++++.. 
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~------~~vAiK~i~~~~~~~~~~~~~~~-Ei~il~~l-~HpnIv~l~~~~~~~  125 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTG------QQVAIKKIPNAFDVVTNAKRTLR-ELKILKHF-KHDNIIAIKDILRPT  125 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEETTTTSSHHHHHHHHH-HHHHHHHC-CCTTBCCEEEECCCS
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCC------CEEEEEEECccccchHHHHHHHH-HHHHHHhc-CCCCcceEeeeeecc
Confidence            67999999999999999999998776      4899999975432  22233333 44556665 69999999998764 


Q ss_pred             -----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          120 -----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       120 -----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                           .+.+|||||||+|+|.+++..  .+.+++.+++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecc
Confidence                 367999999999999988854  4689999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCC-CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSL-SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +|+.+..... ......+.+||+.|||||++.+.  ..++.++||||+||++|||++|+.||.+.+..+.+..|......
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~--~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~  281 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL--HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT  281 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcCC--CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9987643221 22334567999999999998753  24789999999999999999999999999988777766533222


Q ss_pred             CC----------------------C-------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          274 PC----------------------I-------PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       274 p~----------------------~-------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                      +.                      .       .+.+++++.+||.+||+.||++|||+.|+|+      |+|+..
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~------Hp~f~~  350 (398)
T 4b99_A          282 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR------HPFLAK  350 (398)
T ss_dssp             CCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT------SGGGTT
T ss_pred             CChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc------CHhhCc
Confidence            21                      0       1357899999999999999999999999876      667654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=8.7e-48  Score=410.87  Aligned_cols=281  Identities=20%  Similarity=0.297  Sum_probs=228.7

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      .+..+..++|++.+.||+|+||+||+|+++.++      +.||||++++...  .........+..++..+.+||||+.+
T Consensus        16 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l   89 (353)
T 3txo_A           16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETG------DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL   89 (353)
T ss_dssp             -------CCEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CcCCCchhheEEEEEEeeCCCEEEEEEEEcCCC------CEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeE
Confidence            344577899999999999999999999998765      4899999975321  11122233444566666789999999


Q ss_pred             eEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++..++.+||||||++ |+|.+++...  +.+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|
T Consensus        90 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~D  167 (353)
T 3txo_A           90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLAD  167 (353)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEcc
Confidence            999999999999999998 5787777654  5799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++.....   .......+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..  .
T Consensus       168 FG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~  239 (353)
T 3txo_A          168 FGMCKEGICN---GVTTATFCGTPDYIAPEILQEM---LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN--D  239 (353)
T ss_dssp             CTTCBCSCC------------CCGGGCCHHHHHHH---HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--C
T ss_pred             ccceeecccC---CccccccCCCcCeEChhhcCCC---CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc--C
Confidence            9999753221   2233456899999999998743   578899999999999999999999999999888888763  4


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLM------ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~------~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      ...+|..+++++.+||.+||++||.+||++      .++++      +++|.+.+|..+..+.+.+|+.|..
T Consensus       240 ~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~------hp~f~~~~w~~l~~~~~~~p~~p~~  305 (353)
T 3txo_A          240 EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR------HPFFKEIDWAQLNHRQIEPPFRPRI  305 (353)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh------CCcccCCCHHHHhcCcCCCCccCCC
Confidence            566788999999999999999999999998      66655      8899999999999999988887653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=5.7e-47  Score=406.36  Aligned_cols=259  Identities=21%  Similarity=0.331  Sum_probs=200.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.++||+|+||+||+|+++...   ...+.||||.+.+....  ..+ .++..++..+.+||||+.+++++.+++.
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~---~~~~~vAiK~i~~~~~~--~~~-~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQV---GPEEKIALKHLIPTSHP--IRI-AAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTT---SCEEEEEEEEECTTSCH--HHH-HHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccC---CCCCEEEEEEEccccCH--HHH-HHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            57999999999999999999876321   23368999998764432  233 3344566777789999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC-CcEEEEecCCceecc
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH-DQLVLGDFGIPYLLL  200 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~-g~vkL~DFGlak~~~  200 (632)
                      +||||||++ |+|.+++     +.+++.+++.|+.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+...
T Consensus        95 ~~lvmE~~~g~~L~~~~-----~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEEEEECCCCCCHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred             EEEEEeCCCcccHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence            999999998 5788776     268999999999999999999999999999999999999977 899999999998653


Q ss_pred             CCCCC-------------------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCC
Q 006772          201 GRSLS-------------------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW  255 (632)
Q Consensus       201 ~~~~~-------------------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF  255 (632)
                      .....                         .......+||+.|||||++.+.  ..|+.++||||+||++|||++|+.||
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC--PNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC--CCCCCccchhhhHHHHHHHHHCCCCC
Confidence            22110                         1123446899999999998743  24789999999999999999999999


Q ss_pred             CCCC-HHHHHHHHHhhc------------------------------------c----------------CCCCCCCCCH
Q 006772          256 FGKS-VEEIYHSVVIKK------------------------------------E----------------KPCIPSGLPP  282 (632)
Q Consensus       256 ~~~~-~~ei~~~i~~~~------------------------------------~----------------~p~~p~~lp~  282 (632)
                      ...+ ..+.+..|....                                    .                .......+|+
T Consensus       248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~  327 (361)
T 4f9c_A          248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD  327 (361)
T ss_dssp             SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred             CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence            7543 333333222100                                    0                0011245789


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          283 AVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       283 ~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                      ++.+||.+||+.||++|+|++|+++      |+||.+.
T Consensus       328 ~a~DLl~~lL~~dP~~R~ta~eaL~------Hp~f~~i  359 (361)
T 4f9c_A          328 EAYDLLDKLLDLNPASRITAEEALL------HPFFKDM  359 (361)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHT------SGGGTTC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhc------CcccCCC
Confidence            9999999999999999999999876      7777544

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.8e-46  Score=398.18  Aligned_cols=276  Identities=20%  Similarity=0.362  Sum_probs=231.9

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++.++|++.+.||+|+||+||+|+++.++      +.||||++++..   ......+. .+..++..+ +||||+.++++
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-~E~~~l~~l-~hp~iv~l~~~   73 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATG------RYYAMKILRKEVIIAKDEVAHTV-TESRVLQNT-RHPFLTALKYA   73 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHH-HHHHHHHSC-CCTTBCCEEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEeHHHhhhhhHHHHHH-HHHHHHHhC-CCCcCcceEEE
Confidence            46689999999999999999999987665      489999996531   11222233 333444444 79999999999


Q ss_pred             EEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++.+|+||||++| +|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.+|++||+|||+
T Consensus        74 ~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~  151 (337)
T 1o6l_A           74 FQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccc
Confidence            9999999999999985 777777653  4799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      ++.....   .......+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+..  ....
T Consensus       152 a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~  223 (337)
T 1o6l_A          152 CKEGISD---GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--EEIR  223 (337)
T ss_dssp             CBCSCCT---TCCBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC
T ss_pred             hhhcccC---CCcccccccChhhCChhhhcCC---CCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCC
Confidence            9754321   1233456899999999999743   688999999999999999999999999988888777663  4566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCC
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGY  339 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  339 (632)
                      +|..+++++.+||.+||+.||++||     ++.++++      +++|.+.+|..+..+.+.+|+.|...
T Consensus       224 ~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~------h~~f~~~~~~~~~~~~~~pp~~p~~~  286 (337)
T 1o6l_A          224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME------HRFFLSINWQDVVQKKLLPPFKPQVT  286 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCCS
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCCCCCCC
Confidence            7889999999999999999999999     7888776      88999999999998888888777543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=9.3e-47  Score=409.47  Aligned_cols=282  Identities=21%  Similarity=0.338  Sum_probs=229.6

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      ....+..++|++.+.||+|+||+||+|+++.++      +.||||++++...  .........+..++.++.+||||+.+
T Consensus        45 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~------~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l  118 (396)
T 4dc2_A           45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTD------RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL  118 (396)
T ss_dssp             ----CCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCE
T ss_pred             cccCCChhHcEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCee
Confidence            345577889999999999999999999998765      4899999975322  11112234444566666789999999


Q ss_pred             eEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++.+++.+||||||++| +|.+++.+.  +.+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|
T Consensus       119 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~D  196 (396)
T 4dc2_A          119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTD  196 (396)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEECCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEee
Confidence            9999999999999999985 777777654  4799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---------CHHHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---------SVEEI  263 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---------~~~ei  263 (632)
                      ||+++.....   .......+||+.|||||++.+.   .++.++|||||||++|||++|..||...         ....+
T Consensus       197 FGla~~~~~~---~~~~~~~~gt~~Y~aPE~l~~~---~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~  270 (396)
T 4dc2_A          197 YGMCKEGLRP---GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL  270 (396)
T ss_dssp             CTTCBCCCCT---TCCBCCCCBCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH
T ss_pred             cceeeecccC---CCccccccCCcccCCchhhcCC---CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH
Confidence            9999753221   2234557899999999999754   6889999999999999999999999643         22334


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM------ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~------~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      +..+.  .....+|..+++++.+||.+||+.||.+||++      .|+++      +++|.+.+|+.+..+.+.+|+.|.
T Consensus       271 ~~~i~--~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~------Hpff~~i~w~~l~~~~~~pp~~p~  342 (396)
T 4dc2_A          271 FQVIL--EKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------HPFFRNVDWDMMEQKQVVPPFKPN  342 (396)
T ss_dssp             HHHHH--HCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH------STTTTTCCHHHHHTTCSCCSCCCC
T ss_pred             HHHHh--ccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc------CccccCCCHHHHHcCCCCCCCcCC
Confidence            44443  45667889999999999999999999999985      45544      889999999999999999988776


Q ss_pred             CC
Q 006772          338 GY  339 (632)
Q Consensus       338 ~~  339 (632)
                      ..
T Consensus       343 ~~  344 (396)
T 4dc2_A          343 IS  344 (396)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.4e-46  Score=400.58  Aligned_cols=277  Identities=23%  Similarity=0.394  Sum_probs=227.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .+..++|++.+.||+|+||.||+|+++.++      +.||||++++..   ...... ...+..++..+.+||||+.+++
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~-~~~E~~il~~~~~hp~iv~l~~   85 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTN------QFFAIKALKKDVVLMDDDVEC-TMVEKRVLSLAWEHPFLTHMFC   85 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEEHHHHHHTTCHHH-HHHHHHHHHHHTTCTTBCCEEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEhHHhhhhhhHHH-HHHHHHHHHhcCCCCCCCcEEE
Confidence            467789999999999999999999998765      489999997532   111222 3334455556668999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++.+++.+|+||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.+|++||+|||
T Consensus        86 ~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG  163 (345)
T 1xjd_A           86 TFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG  163 (345)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeECh
Confidence            9999999999999997 5888877653  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....   .......+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..  ..+
T Consensus       164 ~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~  235 (345)
T 1xjd_A          164 MCKENMLG---DAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNP  235 (345)
T ss_dssp             TCBCCCCT---TCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCC
T ss_pred             hhhhcccC---CCcccCCCCCcccCChhhhcCC---CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh--CCC
Confidence            99754221   1223456899999999999753   688999999999999999999999999998888877763  456


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHH-HHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMA-DILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~-ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      .+|..+++++.+||.+||+.||++||++. ++++      +++|.+.+|+.+..+.+.+|+.|..
T Consensus       236 ~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~------hp~f~~~~w~~l~~~~~~~p~~p~~  294 (345)
T 1xjd_A          236 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ------HPLFREINWEELERKEIDPPFRPKV  294 (345)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG------SGGGTTCCHHHHHTTCSCC------
T ss_pred             CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc------CccccCCCHHHHhhCCCCCCcCCCC
Confidence            67889999999999999999999999987 5544      8899999999999888888877653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5e-46  Score=397.41  Aligned_cols=279  Identities=22%  Similarity=0.346  Sum_probs=231.9

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+..++|++.+.||+|+||+||+|+++.++      +.||||++++...  .........+..++..+.+||+|+.+++
T Consensus        15 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~   88 (353)
T 2i0e_A           15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTD------ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS   88 (353)
T ss_dssp             ----CTTEEEEEEEEEETTEEEEEEEETTEE------EEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEE
T ss_pred             CCCchHHcEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEE
Confidence            4567789999999999999999999987654      5899999975321  1112223334455666668999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++...+.+||||||++ |+|.+++...  +.+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|||
T Consensus        89 ~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG  166 (353)
T 2i0e_A           89 CFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG  166 (353)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCC
Confidence            9999999999999998 5888877654  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....   .......+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..  ...
T Consensus       167 ~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~  238 (353)
T 2i0e_A          167 MCKENIWD---GVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--HNV  238 (353)
T ss_dssp             TCBCCCCT---TCCBCCCCSCGGGCCHHHHTTC---CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCC
T ss_pred             cccccccC---CcccccccCCccccChhhhcCC---CcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh--CCC
Confidence            99754221   1233456899999999999743   688999999999999999999999999998888888764  456


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      .+|..+++++.+||.+||+.||.+||++     .++++      +++|.+.+|+.+..+.+.+|+.|..
T Consensus       239 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~------h~~f~~~~w~~l~~~~~~~p~~p~~  301 (353)
T 2i0e_A          239 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE------HAFFRYIDWEKLERKEIQPPYKPKA  301 (353)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc------CccccCCCHHHHHhCCCCCCcCCCC
Confidence            6788999999999999999999999964     55554      7899999999999999999887753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.6e-46  Score=421.33  Aligned_cols=260  Identities=22%  Similarity=0.375  Sum_probs=219.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++++.||+|+||.||+|.++.++      +.||||++........+.+ .++..++..+ +||||+.+++++.+++.
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg------~~~AiK~i~~~~~~~~~~~-~~Ei~il~~l-~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATG------NNFAAKFVMTPHESDKETV-RKEIQTMSVL-RHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSHHHHHHH-HHHHHHHHHT-CCTTBCCEEEEEECSSE
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCC------CEEEEEEEeccchhhHHHH-HHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence            68999999999999999999998776      4899999977654443433 4444555555 79999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC--CcEEEEecCCceec
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH--DQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~--g~vkL~DFGlak~~  199 (632)
                      +|||||||+ |+|.+++... .+.+++.+++.|+.||+.||+|||+++|+||||||+|||++.+  +.+||+|||+|+.+
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             EEEEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            999999998 5888887543 3579999999999999999999999999999999999999854  89999999999876


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--CCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--CIP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--~~p  277 (632)
                      ...    ......+||+.|||||++.+.   +|+.++|||||||+||||++|..||.+.+..+++..+.......  ..+
T Consensus       308 ~~~----~~~~~~~GT~~y~APEv~~~~---~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  380 (573)
T 3uto_A          308 DPK----QSVKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF  380 (573)
T ss_dssp             CTT----SEEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGG
T ss_pred             cCC----CceeeeEECccccCHHHhCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccc
Confidence            432    233456899999999999854   68899999999999999999999999999988888876543322  223


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                      ..+|+++.+||.+||+.||.+||++.|+++      |+++....|..
T Consensus       381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~------Hpw~~~~~~~~  421 (573)
T 3uto_A          381 SGISEDGKDFIRKLLLADPNTRMTIHQALE------HPWLTPGNAPG  421 (573)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH------STTTSCCCCTT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc------CcCcCCCCCCC
Confidence            678999999999999999999999999876      77877776654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=9.5e-46  Score=393.56  Aligned_cols=278  Identities=21%  Similarity=0.348  Sum_probs=228.6

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+..++|++.+.||+|+||.||+|+++.++      +.||||++.+..  ..........+..++..+.+||||+.++++
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~   78 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTD------RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC   78 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEE
Confidence            356689999999999999999999998765      489999997542  222233344455666667789999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++.+|+||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.+|++||+|||+
T Consensus        79 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~  156 (345)
T 3a8x_A           79 FQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM  156 (345)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccc
Confidence            999999999999998 5787777654  4799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---------CHHHHHHH
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---------SVEEIYHS  266 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---------~~~ei~~~  266 (632)
                      ++.....   .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||...         ....++..
T Consensus       157 a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  230 (345)
T 3a8x_A          157 CKEGLRP---GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  230 (345)
T ss_dssp             CBCSCCT---TCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH
T ss_pred             cccccCC---CCcccccCCCccccCccccCCC---CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH
Confidence            9753221   1233456899999999999753   6789999999999999999999999752         23334444


Q ss_pred             HHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM------ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       267 i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~------~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      +.  .....+|..+++++.+||.+||+.||.+||++      .++++      +++|.+.+|+.+..+...+|+.+..
T Consensus       231 i~--~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~------hp~f~~~~w~~~~~~~~~~p~~p~~  300 (345)
T 3a8x_A          231 IL--EKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------HPFFRNVDWDMMEQKQVVPPFKPNI  300 (345)
T ss_dssp             HH--HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HH--cCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc------CCccCCCCHHHHHhCCCCCCcCCCC
Confidence            44  34566788999999999999999999999985      45443      8899999999998888888876653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1e-45  Score=398.02  Aligned_cols=284  Identities=23%  Similarity=0.375  Sum_probs=232.2

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhccCCCceeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l~~h~~I~~  112 (632)
                      ..+.+..++|++.+.||+|+||+||+|+++.++      +.||||++.+....   ....+. .+..++.+..+||||+.
T Consensus        31 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~AiK~~~~~~~~~~~~~~~~~-~e~~~ll~~~~hp~Iv~  103 (373)
T 2r5t_A           31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEE------VFYAVKVLQKKAILKKKEEKHIM-SERNVLLKNVKHPFLVG  103 (373)
T ss_dssp             BCTTCCGGGEEEEEEEECCTTCEEEEEEETTTC------CEEEEEEEEGGGBC--------------CCBCCCCCTTBCC
T ss_pred             CCCCCChhheEEEEEEeeCCCeEEEEEEEcCCC------CEEEEEEEEHHHhhhhHHHHHHH-HHHHHHHHhCCCCCCCC
Confidence            345567789999999999999999999988765      48999999764321   112222 22233344568999999


Q ss_pred             eeEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          113 LHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +++++..++.+||||||++| +|.+++.+.  +.+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+
T Consensus       104 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~  181 (373)
T 2r5t_A          104 LHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLT  181 (373)
T ss_dssp             EEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEe
Confidence            99999999999999999984 787777653  479999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++.....   .......+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..  
T Consensus       182 DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--  253 (373)
T 2r5t_A          182 DFGLCKENIEH---NSTTSTFCGTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--  253 (373)
T ss_dssp             CCCBCGGGBCC---CCCCCSBSCCCCCCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH--
T ss_pred             eCccccccccC---CCccccccCCccccCHHHhCCC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--
Confidence            99999754322   1233456899999999999743   688999999999999999999999999998888888764  


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      ....++..+++++.+||.+||+.||.+||++.+.+..+  ..+.+|.+.+|+.+..+.+.+|+.|..
T Consensus       254 ~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i--~~h~~f~~~~w~~l~~~~~~pp~~p~~  318 (373)
T 2r5t_A          254 KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI--KSHVFFSLINWDDLINKKITPPFNPNV  318 (373)
T ss_dssp             SCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH--HTSGGGTTCCHHHHHTTCSCCSCCCSC
T ss_pred             cccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH--hCCccccCCCHHHHHhCCCCCCCCCCC
Confidence            35567889999999999999999999999986433322  247899999999999999998887753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=9.4e-46  Score=427.08  Aligned_cols=279  Identities=22%  Similarity=0.352  Sum_probs=234.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+..++|++++.||+|+||+||+|.++.++      +.||||++++..  .....+....+..++..+.+|++|+.+++
T Consensus       336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~------~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~  409 (674)
T 3pfq_A          336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTD------ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS  409 (674)
T ss_dssp             ----CTTEEEEEESSBTTTBCEEEEEESSSC------CEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEE
T ss_pred             ccccccceEEEEEEccCCCEEEEEEEECCCC------cEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            3466789999999999999999999998765      489999997531  11112223334456666778999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++.+.+.+||||||++ |+|.+++...  +.+++..++.|+.||+.||+|||+++|+||||||+||||+.++++||+|||
T Consensus       410 ~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFG  487 (674)
T 3pfq_A          410 CFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG  487 (674)
T ss_dssp             ECBCSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCT
T ss_pred             EEEeCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecc
Confidence            9999999999999998 5787777654  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....   .......+||+.|||||++.+   ..|+.++|||||||+||||++|..||.+.+..+++..+.  ....
T Consensus       488 la~~~~~~---~~~~~~~~GT~~Y~APE~l~~---~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~--~~~~  559 (674)
T 3pfq_A          488 MCKENIWD---GVTTKTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNV  559 (674)
T ss_dssp             TCEECCCT---TCCBCCCCSCSSSCCHHHHTC---CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--SSCC
T ss_pred             eeeccccC---CcccccccCCCcccCHhhhcC---CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH--hCCC
Confidence            99864322   223455789999999999974   368999999999999999999999999999999888877  4556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                      .+|..+++++.+||.+||++||++||++     .||++      ++||.+.+|+.+..+.+.+|+.|..
T Consensus       560 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~------h~ff~~i~w~~l~~~~~~pp~~p~~  622 (674)
T 3pfq_A          560 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE------HAFFRYIDWEKLERKEIQPPYKPKA  622 (674)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS------SGGGSSCCHHHHTTTCSCCSCCCBC
T ss_pred             CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc------CccccCCCHHHHHhCCCCCCCCCcC
Confidence            7889999999999999999999999987     55544      8899999999999999999887753

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-45  Score=384.89  Aligned_cols=273  Identities=22%  Similarity=0.347  Sum_probs=230.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .++.++|++.+.||+|+||.||+|+++.++      +.||||++.+....  ...+...++..++.. .+||||+.++++
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~   74 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNG------RYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-VTHPFIIRMWGT   74 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCBTTBCCEEEE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHhh-CCCCCCceEeEE
Confidence            456789999999999999999999987665      48999999653211  111223333344444 479999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +.+.+.+|+||||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.+|++||+|||+
T Consensus        75 ~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~  152 (318)
T 1fot_A           75 FQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF  152 (318)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCc
Confidence            999999999999998 588887765  35799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      ++....      .....+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+.+..+..  ....
T Consensus       153 a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~--~~~~  221 (318)
T 1fot_A          153 AKYVPD------VTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN--AELR  221 (318)
T ss_dssp             CEECSS------CBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--CCCC
T ss_pred             ceecCC------ccccccCCccccCHhHhcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCC
Confidence            986532      22346899999999999743   688999999999999999999999999988888877764  4566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      +|..+++++.++|.+||+.||++||     ++.++++      ++++.+.+|+.+..+.+.+|+.|.
T Consensus       222 ~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~------hp~f~~~~~~~~~~~~~~~p~~p~  282 (318)
T 1fot_A          222 FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN------HPWFKEVVWEKLLSRNIETPYEPP  282 (318)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT------SGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc------CccccCCCHHHHHhCCCCCCCCCC
Confidence            7889999999999999999999999     7788776      889999999999988888887664

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.3e-45  Score=398.98  Aligned_cols=282  Identities=21%  Similarity=0.349  Sum_probs=231.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +..++|++.+.||+|+||+||+|+++.++      +.||||++.+....  .......++..++.. .+||||+.+++++
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~------~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~  138 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTR------KVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFYAF  138 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTCCCSTHHHHHHHHHH-CCCTTBCCEEEEE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCC------cEEEEEEEehhhhhhhHHHHHHHHHHHHHHh-CCCCCCCeEEEEE
Confidence            55689999999999999999999998765      48999998642110  001112333344444 4799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+++.+||||||++ |+|.+++..   ..+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|||++
T Consensus       139 ~~~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          139 QDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEecccee
Confidence            99999999999997 577777653   36999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCC-CCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~-g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  ......+||+.|||||++..... +.++.++|||||||++|||++|..||.+.+..+++..+........
T Consensus       216 ~~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~  293 (410)
T 3v8s_A          216 MKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT  293 (410)
T ss_dssp             EECCTTSE--EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC
T ss_pred             EeeccCCc--ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccccc
Confidence            87543211  12335689999999999975421 1278899999999999999999999999999888888876544444


Q ss_pred             CC--CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCC
Q 006772          276 IP--SGLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGY  339 (632)
Q Consensus       276 ~p--~~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  339 (632)
                      +|  ..+++++.+||.+||..+|.+  ||++.||++      +++|.+.+|..+..+...+|+.|...
T Consensus       294 ~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~------Hp~f~~~~w~~~~~~~~~~p~~p~~~  355 (410)
T 3v8s_A          294 FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR------HLFFKNDQWAWETLRDTVAPVVPDLS  355 (410)
T ss_dssp             CCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT------SGGGCCSSCCSTTGGGSCCSCCCCCS
T ss_pred             CCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc------CccccCCCHHHHhhcccCCCCCCcCC
Confidence            44  479999999999999999988  999999887      88999999999888888888877533

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.3e-44  Score=391.15  Aligned_cols=303  Identities=19%  Similarity=0.306  Sum_probs=237.9

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      ...++.++|++.+.||+|+||.||+|.+..++      +.||||++.+..   ......+. ++..++..+ +||||+.+
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~------~~~AiK~~~~~~~~~~~~~~~~~-~E~~il~~l-~hp~Iv~l   80 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTK------KMYAMKYMNKQKCVERNEVRNVF-KELQIMQGL-EHPFLVNL   80 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHH-HHHHHHHTC-CCTTBCCE
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEehhhcccHHHHHHHH-HHHHHHHhC-CCCCCCcE
Confidence            45567789999999999999999999988765      489999986532   11122333 333455555 79999999


Q ss_pred             eEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++.+.+.+|+||||+.| +|.+++..  ...+++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|
T Consensus        81 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~D  158 (384)
T 4fr4_A           81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITD  158 (384)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEeCCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEec
Confidence            9999999999999999985 67666653  45799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---CHHHHHHHHHh
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---SVEEIYHSVVI  269 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---~~~ei~~~i~~  269 (632)
                      ||+++.....    ......+||+.|+|||++.......++.++|||||||++|||++|..||...   ...++...+. 
T Consensus       159 FG~a~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-  233 (384)
T 4fr4_A          159 FNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE-  233 (384)
T ss_dssp             CTTCEECCTT----CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH-
T ss_pred             cceeeeccCC----CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-
Confidence            9999875322    2334568999999999997543456889999999999999999999999854   3444444433 


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCC-HHHHHHHHHhhhhcccCCCCccccccccccCCCcCCCCCCcccCccc
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPL-MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDH  348 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs-~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (632)
                       .....+|..+++++.+||.+||+.||.+||+ +.++++      ++++.+.+|+.+..+.+.+++.|....  ...+..
T Consensus       234 -~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~------hp~f~~~~w~~~~~~~~~p~~~p~~~~--~~~~~~  304 (384)
T 4fr4_A          234 -TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN------FPYMNDINWDAVFQKRLIPGFIPNKGR--LNCDPT  304 (384)
T ss_dssp             -HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT------SGGGTTCCHHHHHTTCSCCCCCCSCCS--SCCCCC
T ss_pred             -hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc------ChhhhcCCHHHHHhCCCCCCCCCCCCC--CCCCCc
Confidence             4556678899999999999999999999998 666654      789999999999999998888776332  223333


Q ss_pred             CccCcccccCCCCCC
Q 006772          349 LQVGDTVRSRKPLNA  363 (632)
Q Consensus       349 ~~~~~~~~s~~p~~~  363 (632)
                      +.........+|...
T Consensus       305 ~~~~~~~~~~~~l~~  319 (384)
T 4fr4_A          305 FELEEMILESKPLHK  319 (384)
T ss_dssp             CCSTTSCTTCCC---
T ss_pred             cChhhhhhccccccH
Confidence            433344444444433

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.6e-44  Score=385.01  Aligned_cols=272  Identities=23%  Similarity=0.354  Sum_probs=231.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .+..++|++.+.||+|+||.||+|.++.++      +.||||++.+...   .....+ ..+..++..+ +||||+.+++
T Consensus        37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~-~~E~~~l~~l-~hp~iv~~~~  108 (350)
T 1rdq_E           37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESG------NHYAMKILDKQKVVKLKQIEHT-LNEKRILQAV-NFPFLVKLEF  108 (350)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHH-HHHHHHHTTC-CCTTBCCEEE
T ss_pred             CCCHHHCEEEEEeecCcCcEEEEEEECCCC------CEEEEEEEEhHHhccHHHHHHH-HHHHHHHHhC-CCCCCCeEEE
Confidence            345689999999999999999999988665      4899999865321   112222 3333455554 7999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++.+++.+||||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.+|.+||+|||
T Consensus       109 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg  186 (350)
T 1rdq_E          109 SFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG  186 (350)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             EEEcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccc
Confidence            9999999999999997 6888887654  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++....      .....+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..  ...
T Consensus       187 ~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~  255 (350)
T 1rdq_E          187 FAKRVKG------RTWTLCGTPEALAPEIILSK---GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKV  255 (350)
T ss_dssp             TCEECSS------CBCCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCC
T ss_pred             cceeccC------CcccccCCccccCHHHhcCC---CCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc--CCC
Confidence            9987532      22346899999999999743   688999999999999999999999999998888887764  356


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .+|..+++++.++|.+||+.||.+||+     +.++++      +++|.+.+|..+..+.+.+|+.|.
T Consensus       256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~------h~~f~~~~w~~~~~~~~~~p~~p~  317 (350)
T 1rdq_E          256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN------HKWFATTDWIAIYQRKVEAPFIPK  317 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh------CcCcCCCCHHHHhhccCCCCCCCC
Confidence            678899999999999999999999998     777765      789999999999988888887664

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=6.8e-45  Score=399.71  Aligned_cols=280  Identities=20%  Similarity=0.360  Sum_probs=227.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +..++|++.+.||+|+||+||+|+++.++      +.||||++.+.....  ......++..++.. .+|+||+.+++++
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~------~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~-~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNAD------KVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLHYAF  143 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEHHHHHHTTTTCCHHHHHHHHHH-SCTTTBCCEEEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCC------cEEEEEEEEHHHhhhHHHHHHHHHHHHHHHh-CCCCCEEEEEEEE
Confidence            45689999999999999999999998765      489999996421111  01112333344444 4899999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+++.+||||||++ |+|.+++... .+.+++..++.|+.||+.||+|||+++|+||||||+|||++.++++||+|||++
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla  222 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC  222 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence            99999999999997 6787777542 468999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +......  .......+||+.|||||++...  ..+.++.++|||||||++|||++|+.||.+.+..+.+..+.......
T Consensus       223 ~~~~~~~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~  300 (437)
T 4aw2_A          223 LKLMEDG--TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF  300 (437)
T ss_dssp             EECCTTS--CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred             hhcccCC--CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc
Confidence            8654321  1122346899999999998621  12358899999999999999999999999999988888887554444


Q ss_pred             CCC---CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          275 CIP---SGLPPAVENVIIGCFEYDLRN--RPLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       275 ~~p---~~lp~~l~~LI~~cL~~DP~~--RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .+|   ..+++++.+||.+||..+|++  ||+++|+++      +++|.+.+|+.+.  ...+|+.|.
T Consensus       301 ~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~------Hpff~~i~w~~l~--~~~~p~~P~  360 (437)
T 4aw2_A          301 QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK------HPFFSGIDWDNIR--NCEAPYIPE  360 (437)
T ss_dssp             CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT------SGGGTTCCTTTGG--GSCCSCCCC
T ss_pred             cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC------CCccCCCCHHHHh--hCCCCCCCc
Confidence            444   458999999999999998888  999999876      8899999999983  566666554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-44  Score=392.34  Aligned_cols=280  Identities=21%  Similarity=0.364  Sum_probs=223.3

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+..++|++.+.||+|+||+||+|+++.++      +.||||++.+.....  ....+.++..++.. .+|+||+.++++
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~------~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~-~~hp~Iv~l~~~  129 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTG------QVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQLHFA  129 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHHGGGCCHHHHHHHHHH-SCTTTBCCEEEE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-cCCCCeeeEEEE
Confidence            356689999999999999999999998665      489999996522111  11112333344444 479999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +.+++.+||||||++ |+|.+++.+. +..+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|||+
T Consensus       130 ~~~~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGl  208 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGS  208 (412)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EeeCCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechh
Confidence            999999999999997 6888887654 35799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCC----CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE----VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~----~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      ++.......  ......+||+.|||||++...    ..+.++.++|||||||++|||++|+.||.+.+..+++..+....
T Consensus       209 a~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~  286 (412)
T 2vd5_A          209 CLKLRADGT--VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK  286 (412)
T ss_dssp             CEECCTTSC--EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred             heeccCCCc--cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence            987543211  122346899999999998631    12357899999999999999999999999999888888877543


Q ss_pred             cC---CCCCCCCCHHHHHHHHHhhhcCcCCC---CCHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          272 EK---PCIPSGLPPAVENVIIGCFEYDLRNR---PLMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       272 ~~---p~~p~~lp~~l~~LI~~cL~~DP~~R---Ps~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ..   +..+..+|+++.+||.+||. +|.+|   |+++|+++      +++|.+.+|+.+.  ...+|+.|.
T Consensus       287 ~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~------Hpff~~i~w~~l~--~~~~p~~p~  349 (412)
T 2vd5_A          287 EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT------HPFFFGLDWDGLR--DSVPPFTPD  349 (412)
T ss_dssp             HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT------SGGGTTCCSTTST--TSCCSCCCC
T ss_pred             cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc------CCCcCCCCHHHHh--hcCCCCCCc
Confidence            33   33346899999999999999 99998   58888765      8899999999985  345666554

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.3e-44  Score=376.17  Aligned_cols=281  Identities=19%  Similarity=0.297  Sum_probs=223.1

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      ...+..++|++.+.||+|+||.||+|++....   ..++.||||++++...   ........++..++..+ +|+||+.+
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~   86 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGA---NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDL   86 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECSST---TTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCE
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEeccC---CCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccce
Confidence            34567789999999999999999999985321   2346899999976421   11122223344455555 69999999


Q ss_pred             eEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++..++.+||||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~D  164 (327)
T 3a62_A           87 IYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTD  164 (327)
T ss_dssp             EEEEECSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECC
T ss_pred             eEEEEcCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEe
Confidence            999999999999999998 5787777653  4799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++.....   .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+....+..  .
T Consensus       165 fg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~--~  236 (327)
T 3a62_A          165 FGLCKESIHD---GTVTHTFCGTIEYMAPEILMRS---GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK--C  236 (327)
T ss_dssp             CSCC-------------CTTSSCCTTSCHHHHTTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--T
T ss_pred             CCcccccccC---CccccccCCCcCccCHhhCcCC---CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh--C
Confidence            9998754321   1122346799999999999743   678999999999999999999999999888887777663  4


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ...+|..+++++.++|.+||+.||++||     ++.++++      ++++.+.+|+.+..+...+++.+.
T Consensus       237 ~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~------hp~f~~~~~~~~~~~~~~~p~~p~  300 (327)
T 3a62_A          237 KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA------HPFFRHINWEELLARKVEPPFKPL  300 (327)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH------SGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc------CCcccCCCHHHHhhccCCCCCCCC
Confidence            5567889999999999999999999999     6777766      889999999998888777776554

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.4e-43  Score=379.97  Aligned_cols=274  Identities=20%  Similarity=0.307  Sum_probs=223.9

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCC-CcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSAD-DFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~-~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...+..++|++.+.||+|+||.||+|++..... .......||||+++..........+.++..++..+.+||||+.+++
T Consensus        75 ~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  154 (370)
T 2psq_A           75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG  154 (370)
T ss_dssp             TTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             cccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            345667899999999999999999999864322 1134468999999765443333334445566777778999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      ++..++.+|+||||++ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            9999999999999998 58888887543              23589999999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS  259 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~  259 (632)
                      |++.++.+||+|||+++........ .......||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+
T Consensus       235 ll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          235 LVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             EECTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCHHHHHT---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EECCCCCEEEccccCCcccCcccce-ecccCCCcccceECHhHhcC---CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            9999999999999999865432211 12233467889999999874   368999999999999999999 999999988


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ..++...+. ....+..|..+++++.++|.+||+.||.+||++.|+++.|+.+...
T Consensus       311 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          311 VEELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             GGGHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            777766554 3455667889999999999999999999999999999999887643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.8e-44  Score=391.72  Aligned_cols=276  Identities=20%  Similarity=0.360  Sum_probs=225.8

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||||++.+..   ......+ ..+..++.. .+||||+.++
T Consensus       143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~-~~e~~~l~~-l~h~~iv~l~  214 (446)
T 4ejn_A          143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATG------RYYAMKILKKEVIVAKDEVAHT-LTENRVLQN-SRHPFLTALK  214 (446)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHC--------------CCCC-CSCTTSCCEE
T ss_pred             cCCChHHcEEeEEEeeCcCEEEEEEEEcCCC------CEEEEEEEEhhhhhhhHHHHHH-HHHHHHHHh-CCCCeEeeEE
Confidence            3456689999999999999999999988765      489999996431   1111222 222233444 4699999999


Q ss_pred             EEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEe
Q 006772          115 GISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      +++..++.+||||||++| +|.+++...  +.+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|
T Consensus       215 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~D  292 (446)
T 4ejn_A          215 YSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD  292 (446)
T ss_dssp             EEEEETTEEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECC
T ss_pred             EEEeeCCEEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEcc
Confidence            999999999999999985 777777553  479999999999999999999998 9999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++.....   .......+||+.|||||++.+   ..++.++|||||||++|||++|..||.+.+..++...+..  .
T Consensus       293 FG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~  364 (446)
T 4ejn_A          293 FGLCKEGIKD---GATMKTFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--E  364 (446)
T ss_dssp             CCCCCTTCC--------CCSSSCGGGCCHHHHHT---SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--C
T ss_pred             CCCceeccCC---CcccccccCCccccCHhhcCC---CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh--C
Confidence            9998753221   122345689999999999974   3689999999999999999999999999988888777663  4


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ...+|..+++++.+||.+||+.||.+||     ++.|+++      +++|.+.+|..+..+.+.+|+.|.
T Consensus       365 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~------hp~f~~~~~~~~~~~~~~pp~~p~  428 (446)
T 4ejn_A          365 EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ------HRFFAGIVWQHVYEKKLSPPFKPQ  428 (446)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCS
T ss_pred             CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh------CccccCCCHHHHhhCcCCCCccCC
Confidence            5667889999999999999999999999     8998876      889999999999888888887664

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=8.5e-44  Score=374.28  Aligned_cols=271  Identities=18%  Similarity=0.303  Sum_probs=219.7

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ....+..++|++.+.||+|+||.||+|.+..+++   ....||||+++..........+.++..++..+ +|+||+.+++
T Consensus        42 ~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~  117 (325)
T 3kul_A           42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ---RDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEG  117 (325)
T ss_dssp             -CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTS---CCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             hccccChhHeEEeeEEEeCCCcEEEEEEEecCCC---CCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence            3456778999999999999999999999876542   33579999997654333333334444555665 6999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++..||||||++| +|.+++.. ..+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  196 (325)
T 3kul_A          118 VVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG  196 (325)
T ss_dssp             EECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             EEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCC
Confidence            99988999999999985 77777644 34689999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++................+|+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+..++...+.. ...
T Consensus       197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~~  272 (325)
T 3kul_A          197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF---RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-GYR  272 (325)
T ss_dssp             SCEECC----CCEECC---CCGGGSCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-TCC
T ss_pred             cccccccCccceeeccCCCCcccccCHhHhcC---CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCC
Confidence            99876433222222233456889999999964   368889999999999999999 9999999988887776653 345


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ...+..+++++.++|.+||+.||++||++.++++.|+.+...
T Consensus       273 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            567789999999999999999999999999999999887643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=8.2e-43  Score=368.45  Aligned_cols=248  Identities=21%  Similarity=0.340  Sum_probs=209.6

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||||++.+..  ....+.+.+ +..++..+ +||||+.+++++.
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~hpnIv~l~~~~~   84 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTG------REVAIKIIDKTQLNPTSLQKLFR-EVRIMKIL-NHPNIVKLFEVIE   84 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHH-HHHHHHHC-CCTTBCCEEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEhhcCCHHHHHHHHH-HHHHHHhC-CCCCEeeEEEEEE
Confidence            3468999999999999999999997766      489999996532  222233333 33445555 6999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++.+|+||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        85 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           85 TEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN  162 (328)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred             ECCEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence            9999999999997 6888888654  479999999999999999999999999999999999999999999999999987


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCC-CcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPI-SFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~-t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .....    ......+||+.|+|||++.+.   .+ +.++|||||||++|||++|..||.+.+..++...+..  ....+
T Consensus       163 ~~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~--~~~~~  233 (328)
T 3fe3_A          163 EFTVG----GKLDAFCGAPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR--GKYRI  233 (328)
T ss_dssp             GGSSS----CGGGTTSSSGGGCCHHHHHTC---CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCC
T ss_pred             ecCCC----CccccccCCcceeCcccccCC---CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCC
Confidence            54322    233456899999999999754   33 5799999999999999999999999998888777663  45567


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |..+++++.+||.+||+.||.+|||+.++++
T Consensus       234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            8889999999999999999999999999886

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-42  Score=373.00  Aligned_cols=278  Identities=21%  Similarity=0.322  Sum_probs=227.8

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      |......+..++|++.+.||+|+||.||+|.+...+.. ......||||++.............++..++..+.+|+||+
T Consensus        59 ~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv  138 (382)
T 3tt0_A           59 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNII  138 (382)
T ss_dssp             CCCTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccCcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhh
Confidence            44445567789999999999999999999998654321 13345899999976544333333444556667777899999


Q ss_pred             EeeEEEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeee
Q 006772          112 WLHGISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK  176 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLK  176 (632)
                      .+++++..++..||||||++ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+|||||
T Consensus       139 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  218 (382)
T 3tt0_A          139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  218 (382)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             hheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            99999999999999999998 58888887653              2469999999999999999999999999999999


Q ss_pred             CCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCC
Q 006772          177 PSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPW  255 (632)
Q Consensus       177 P~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF  255 (632)
                      |+|||++.++.+||+|||+++....... ........||+.|+|||++.+   ..++.++|||||||++|||++ |..||
T Consensus       219 p~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~ellt~g~~p~  294 (382)
T 3tt0_A          219 ARNVLVTEDNVMKIADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPY  294 (382)
T ss_dssp             GGGEEECTTCCEEECSCSCCCCSSCCCT-TCCCTTCCCGGGGSCHHHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cceEEEcCCCcEEEcccCcccccccccc-cccccCCCCCcceeCHHHhcC---CCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999986533211 112233467899999999874   368899999999999999999 99999


Q ss_pred             CCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          256 FGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       256 ~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      .+.+..++...+. ....+..+..+++++.++|.+||+.||++||++.++++.|+.+...
T Consensus       295 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          295 PGVPVEELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             TTCCHHHHHHHHH-TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            9998888776654 4456667889999999999999999999999999999999887643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.2e-43  Score=373.37  Aligned_cols=271  Identities=21%  Similarity=0.339  Sum_probs=218.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+..... ...++.||||+++............++..++..+.+||||+.+++++.
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~   96 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   96 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSS-TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccc-cccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence            3667899999999999999999999754321 234568999999765443333334445566777889999999999987


Q ss_pred             ECC-EEEEEEecCC-CCHHHHHHHhcC-----------------------------------------------------
Q 006772          119 ING-KICIAMKFYE-GSVGDRIAQQRG-----------------------------------------------------  143 (632)
Q Consensus       119 ~~~-~l~LVmEy~~-GsL~d~l~~~~~-----------------------------------------------------  143 (632)
                      ..+ .+++||||+. |+|.+++.....                                                     
T Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (359)
T 3vhe_A           97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV  176 (359)
T ss_dssp             STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence            754 5999999998 588888765421                                                     


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccc
Q 006772          144 -----------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALR  212 (632)
Q Consensus       144 -----------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~  212 (632)
                                 ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... ........
T Consensus       177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~  255 (359)
T 3vhe_A          177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVRKGDA  255 (359)
T ss_dssp             -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT-TCEEC--C
T ss_pred             hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc-cchhcccc
Confidence                       128999999999999999999999999999999999999999999999999997653321 11122345


Q ss_pred             cCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006772          213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGC  291 (632)
Q Consensus       213 ~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~c  291 (632)
                      .||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+....+...........+..|..+++++.++|.+|
T Consensus       256 ~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  332 (359)
T 3vhe_A          256 RLPLKWMAPETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC  332 (359)
T ss_dssp             EECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCceeEChhhhcC---CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            68999999999874   468899999999999999998 99999987755544455555667778889999999999999


Q ss_pred             hhcCcCCCCCHHHHHHHHHhhhh
Q 006772          292 FEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       292 L~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      |+.||.+||++.++++.|+.+..
T Consensus       333 l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          333 WHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCChhhCCCHHHHHHHHHHHHH
Confidence            99999999999999999987754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.7e-42  Score=356.31  Aligned_cols=264  Identities=17%  Similarity=0.227  Sum_probs=212.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+..++      +.||||++......  .. ..++..++..+.+|++++.+++++.
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~--~~-~~~e~~~~~~l~~~~~i~~~~~~~~   76 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNN------QQVAIKFEPRRSDA--PQ-LRDEYRTYKLLAGCTGIPNVYYFGQ   76 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTT------EEEEEEEEECCTTS--CC-HHHHHHHHHHTTTCTTCCCEEEEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCC------cEEEEEEeccCCcc--HH-HHHHHHHHHHHhcCCCCCeEEeecC
Confidence            345678999999999999999999987655      58999998654322  12 2333355666778999999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc-----EEEEec
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ-----LVLGDF  193 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~-----vkL~DF  193 (632)
                      .+...++||||+.|+|.+++... +..+++..++.++.||+.||+|||+++|+||||||+|||++.++.     +||+||
T Consensus        77 ~~~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df  155 (298)
T 1csn_A           77 EGLHNVLVIDLLGPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDF  155 (298)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred             CCceeEEEEEecCCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence            99999999999988898888654 457999999999999999999999999999999999999988776     999999


Q ss_pred             CCceeccCCCCCC----CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---CHHHHHHH
Q 006772          194 GIPYLLLGRSLSD----SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---SVEEIYHS  266 (632)
Q Consensus       194 Glak~~~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---~~~ei~~~  266 (632)
                      |+++.........    .......||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.   ...+.+..
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  232 (298)
T 1csn_A          156 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER  232 (298)
T ss_dssp             TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH
T ss_pred             ccccccccccccccccccCccCCCCCcccCCchhhcCC---CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHH
Confidence            9998764332111    123456799999999998743   6889999999999999999999999884   34444444


Q ss_pred             HHhhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          267 VVIKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       267 i~~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +......+.   ....+|+++.++|.+||+.||++||++.+|++.|+.+...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          233 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            433222222   3357899999999999999999999999999999887654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.1e-42  Score=391.75  Aligned_cols=278  Identities=21%  Similarity=0.324  Sum_probs=228.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .+..++|++.+.||+|+||.||+|+++.++      +.||||++.+...   .....+ ..+..++..+ +||||+.+++
T Consensus       181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg------~~vAiK~l~k~~~~~~~~~~~~-~~E~~iL~~l-~hp~Iv~l~~  252 (543)
T 3c4z_A          181 PMGEDWFLDFRVLGRGGFGEVFACQMKATG------KLYACKKLNKKRLKKRKGYQGA-MVEKKILAKV-HSRFIVSLAY  252 (543)
T ss_dssp             CCCGGGEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHH-HHHHHHHHHC-CCTTBCCEEE
T ss_pred             cCChhheEEEEEEeeCCCeEEEEEEECCCC------cEEEEEEEEhHHhhhhHHHHHH-HHHHHHHHhc-CCCCEeeEEE
Confidence            356789999999999999999999987665      4899999965321   111222 2333455554 7999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++...+.+||||||++ |+|.+++....  ...+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|
T Consensus       253 ~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~D  332 (543)
T 3c4z_A          253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISD  332 (543)
T ss_dssp             EEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECC
T ss_pred             EEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEee
Confidence            9999999999999998 57777776543  35799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC----CHHHHHHHHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK----SVEEIYHSVV  268 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~----~~~ei~~~i~  268 (632)
                      ||+++......   ......+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.    ...++...+.
T Consensus       333 FGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~---~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~  406 (543)
T 3c4z_A          333 LGLAVELKAGQ---TKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL  406 (543)
T ss_dssp             CTTCEECCTTC---CCBCCCCSCTTTSCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH
T ss_pred             cceeeeccCCC---cccccccCCccccChhhhcCC---CCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh
Confidence            99998753321   122345899999999999753   6889999999999999999999999875    3455665554


Q ss_pred             hhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHHHHHhhhhcccCCCCccccccccccCCCcCCC
Q 006772          269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM-----ADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVKG  338 (632)
Q Consensus       269 ~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~-----~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~~  338 (632)
                        .....+|..+++++.+||.+||+.||++||++     .+|++      +++|.+.+|..+..+...+|+.|..
T Consensus       407 --~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~------Hpff~~i~w~~l~~~~~~pp~~P~~  473 (543)
T 3c4z_A          407 --EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT------HPLFRDISWRQLEAGMLTPPFVPDS  473 (543)
T ss_dssp             --HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCS
T ss_pred             --hcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc------CccccCCCHHHHHcCCCCCCCCCCc
Confidence              34566788999999999999999999999975     55554      8899999999999888888877653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-43  Score=373.35  Aligned_cols=284  Identities=20%  Similarity=0.325  Sum_probs=224.9

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      ...+..++|++.+.||+|+||.||+|++....   ..++.||||++++...   .........+..++..+.+|+||+.+
T Consensus        48 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           48 AEKVGIENFELLKVLGTGAYGKVFLVRKISGH---DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             CCCCCGGGEEEEEEEEETTTEEEEEEEECSST---TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             cccccccceEEEEEeccCCCEEEEEEEEcccC---CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEE
Confidence            34456689999999999999999999985422   2346899999864321   11111122333556667789999999


Q ss_pred             eEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++..++.+||||||++ |+|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus       125 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D  202 (355)
T 1vzo_A          125 HYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTD  202 (355)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESC
T ss_pred             EEEEeeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEee
Confidence            999999999999999998 5888887654  4799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC----CHHHHHHHHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK----SVEEIYHSVV  268 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~----~~~ei~~~i~  268 (632)
                      ||+++......  .......+||+.|+|||++.+. ...++.++|||||||++|||++|..||...    ...++...+.
T Consensus       203 fG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  279 (355)
T 1vzo_A          203 FGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL  279 (355)
T ss_dssp             SSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred             CCCCeecccCC--CCcccCcccCcCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh
Confidence            99998653221  1223345799999999999743 235788999999999999999999999753    2344444433


Q ss_pred             hhccCCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcC
Q 006772          269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSV  336 (632)
Q Consensus       269 ~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~  336 (632)
                        ...+.+|..+++.+.+||.+||+.||.+||     ++.++++      +.++...+|..+..+...+++.+
T Consensus       280 --~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~------h~~f~~~~~~~l~~~~~~~p~~p  344 (355)
T 1vzo_A          280 --KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE------HLFFQKINWDDLAAKKVPAPFKP  344 (355)
T ss_dssp             --HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             --ccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc------CcchhcCChhHhhhccCCCCCCC
Confidence              345667889999999999999999999999     8888876      77888999998888777776654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.3e-42  Score=359.76  Aligned_cols=276  Identities=22%  Similarity=0.304  Sum_probs=222.9

Q ss_pred             CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           35 QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        35 ~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      .....+..++|++.+.||+|+||.||+|.+..... ...++.||||++.........+.+.++..++..+.+||||+.++
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~   93 (313)
T 1t46_A           15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL   93 (313)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSS-TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccccChhhhhHHHhhCccCCcceEEEEEeeccc-cchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEE
Confidence            33445677899999999999999999998743211 13346899999986554333344445556677777899999999


Q ss_pred             EEEEECCEEEEEEecCCC-CHHHHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeC
Q 006772          115 GISVINGKICIAMKFYEG-SVGDRIAQQRG----------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKP  177 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~----------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP  177 (632)
                      +++..++..++||||++| +|.+++.....                ..+++..++.++.||+.||+|||+++|+||||||
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  173 (313)
T 1t46_A           94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (313)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence            999999999999999985 88888876432                2589999999999999999999999999999999


Q ss_pred             CeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCC
Q 006772          178 SNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF  256 (632)
Q Consensus       178 ~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~  256 (632)
                      +|||++.++.+||+|||+++....... ........||+.|+|||++.+   ..++.++|+|||||++|||++ |..||.
T Consensus       174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~  249 (313)
T 1t46_A          174 RNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARLPVKWMAPESIFN---CVYTFESDVWSYGIFLWELFSLGSSPYP  249 (313)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTT-SEECSSSEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             ceEEEcCCCCEEEcccccccccccccc-ceeccCCCCcceeeChHHhcC---CCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999876533211 111223457889999999864   368899999999999999999 999999


Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       257 ~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +................+..+..+++++.++|.+||+.||.+||++.++++.|+.+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             TCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            87755544455555556666788999999999999999999999999999999876643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.2e-42  Score=360.65  Aligned_cols=249  Identities=19%  Similarity=0.323  Sum_probs=206.3

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++........+.+.+ +..++.. .+||||+.+++++..++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~-E~~~l~~-l~hp~iv~~~~~~~~~~   90 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIIN-EILVMRE-NKNPNIVNYLDSYLVGD   90 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTC------CEEEEEEEEGGGCSCHHHHHH-HHHHHHH-CCCTTBCCEEEEEEETT
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCC------cEEEEEEeecccccHHHHHHH-HHHHHhc-CCCCCCCeEeEEEEECC
Confidence            368999999999999999999987655      489999986544333333333 3344444 47999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      .+|+||||++ |+|.+++..   ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            9999999997 577777654   369999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKPCIPSG  279 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p~~p~~  279 (632)
                      ...   .......||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+.......+.... .....+..
T Consensus       168 ~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
T 3fxz_A          168 PEQ---SKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK  241 (297)
T ss_dssp             STT---CCBCCCCSCGGGCCHHHHHCS---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGG
T ss_pred             Ccc---cccCCccCCcCccChhhhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccc
Confidence            321   223446799999999999743   68899999999999999999999999988766555544332 23345678


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++.+.++|.+||+.||++||++.|+++
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999999999999999999999999886

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1e-42  Score=363.86  Aligned_cols=262  Identities=26%  Similarity=0.393  Sum_probs=209.5

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ...|..++|++.+.||+|+||.||+|.+..        +.||||++.....  .....+.+ +..++.++ +|+||+.++
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~~-E~~~l~~l-~hp~iv~~~  100 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHG--------SDVAVKILMEQDFHAERVNEFLR-EVAIMKRL-RHPNIVLFM  100 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEETT--------EEEEEEEECCCCCSHHHHHHHHH-HHHHHHHC-CCTTBCCEE
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEECC--------CcEEEEEecCCCCCHHHHHHHHH-HHHHHHhC-CCCCEeeEE
Confidence            344677899999999999999999998642        4799999976432  22233333 34555555 699999999


Q ss_pred             EEEEECCEEEEEEecCCC-CHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEecCCcEEE
Q 006772          115 GISVINGKICIAMKFYEG-SVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~G-sL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld~~g~vkL  190 (632)
                      +++..++.+++||||++| +|.+++.... ...+++..++.++.||+.||+|||+++  |+||||||+|||++.++.+||
T Consensus       101 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL  180 (309)
T 3p86_A          101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV  180 (309)
T ss_dssp             EEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEE
T ss_pred             EEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEE
Confidence            999999999999999984 8888775432 124899999999999999999999999  999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||+++......   .......||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+....+...
T Consensus       181 ~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~  254 (309)
T 3p86_A          181 CDFGLSRLKASTF---LSSKSAAGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK  254 (309)
T ss_dssp             CCCC--------------------CCTTSCHHHHTTC---CCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS
T ss_pred             CCCCCCccccccc---cccccCCCCccccChhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            9999997543221   122345789999999999744   5788999999999999999999999999888877777666


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .....+|..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       255 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            67778889999999999999999999999999999999987653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.5e-42  Score=350.91  Aligned_cols=260  Identities=18%  Similarity=0.294  Sum_probs=217.1

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...|+.++|++.+.||+|+||.||+|.+..        +.||||++...... .......++..++..+ +||||+.+++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   74 (271)
T 3kmu_A            4 HSGIDFKQLNFLTKLNENHSGELWKGRWQG--------NDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLG   74 (271)
T ss_dssp             CCCCCGGGCEEEEEEEEETTEEEEEEEETT--------EEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEE
T ss_pred             cCCCCHHHhHHHHHhcCCCcceEEEEEECC--------eeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEE
Confidence            345778999999999999999999999752        47999999764321 2222233333444554 7999999999


Q ss_pred             EEEEC--CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEecCCcEEE
Q 006772          116 ISVIN--GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       116 ~~~~~--~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld~~g~vkL  190 (632)
                      ++...  +..++||||++ |+|.+++.......+++..++.++.||+.||+|||+++  |+||||||+|||++.++.++|
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l  154 (271)
T 3kmu_A           75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI  154 (271)
T ss_dssp             EECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEE
T ss_pred             EEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeE
Confidence            98876  78899999998 58888887654446999999999999999999999999  999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||++...        ......||+.|+|||++.+.....++.++|||||||++|||++|..||.+.+..+....+...
T Consensus       155 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  226 (271)
T 3kmu_A          155 SMADVKFSF--------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE  226 (271)
T ss_dssp             EGGGSCCTT--------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS
T ss_pred             Eeccceeee--------cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc
Confidence            999976432        112346899999999997654445566899999999999999999999999888877777777


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ...+.+|..+++++.++|.+||+.||++||++.++++.|+.+.
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          227 GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            7778889999999999999999999999999999999998765

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=8e-43  Score=394.59  Aligned_cols=276  Identities=21%  Similarity=0.361  Sum_probs=227.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      +..++|++.+.||+|+||.||+|.++.++      +.||||++.+...  .........+..++..+ +|+||+.+++++
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg------~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~  253 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAY  253 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEE
Confidence            66789999999999999999999988665      4899999965321  11122223344555555 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .+++.+||||||++ |+|.+++.......+++..++.|+.||+.||+|||+++|+||||||+|||++.+|++||+|||++
T Consensus       254 ~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla  333 (576)
T 2acx_A          254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA  333 (576)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccc
Confidence            99999999999997 57777776554456999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC----HHHHHHHHHhhcc
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS----VEEIYHSVVIKKE  272 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~----~~ei~~~i~~~~~  272 (632)
                      +.....    ......+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+    ..++...+.  ..
T Consensus       334 ~~~~~~----~~~~~~~GT~~Y~APEvl~~~---~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~  404 (576)
T 2acx_A          334 VHVPEG----QTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EV  404 (576)
T ss_dssp             EECCTT----CCEECCCSCGGGCCHHHHTTC---EESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HC
T ss_pred             eecccC----ccccccCCCccccCHHHHcCC---CCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cc
Confidence            875322    123446899999999999743   58899999999999999999999998753    344554443  34


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ...+|..+++++.+||.+||+.||.+||     ++.|+++      +++|.+.+|..+..+.+.+|+.|.
T Consensus       405 ~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~------HpfF~~i~w~~l~~~~~~pp~~p~  468 (576)
T 2acx_A          405 PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE------HPLFKKLNFKRLGAGMLEPPFKPD  468 (576)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh------ChhhccCCHHHHhcCCCCCCCCCC
Confidence            5667889999999999999999999999     6777776      889999999999888888887664

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.1e-42  Score=371.85  Aligned_cols=253  Identities=20%  Similarity=0.284  Sum_probs=195.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+..  ....... .++..++..+..|+||+.+++++..+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~~-~~E~~~l~~l~~h~niv~l~~~~~~~   81 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTG------EVVAVKKIFDAFQNSTDAQRT-FREIMILTELSGHENIVNLLNVLRAD   81 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTC------CEEEEEEECC--CCHHHHHHH-HHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCC------CEEEEEEecccccChHHHHHH-HHHHHHHHhccCCCCCCeeeeEEecC
Confidence            68999999999999999999998766      489999986532  2222333 33445567777799999999998765


Q ss_pred             C--EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          121 G--KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       121 ~--~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      +  .+||||||++|+|.+.+..   +.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.
T Consensus        82 ~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           82 NDRDVYLVFDYMETDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             TSSCEEEEEECCSEEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCCEEEEEecccCcCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            4  7999999999998888764   3799999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCC------------------CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH
Q 006772          199 LLGRSL------------------SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV  260 (632)
Q Consensus       199 ~~~~~~------------------~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~  260 (632)
                      ......                  ........+||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            532110                  01123345899999999998742  3688999999999999999999999999887


Q ss_pred             HHHHHHHHhhccCCC---------------------------------------------CCCCCCHHHHHHHHHhhhcC
Q 006772          261 EEIYHSVVIKKEKPC---------------------------------------------IPSGLPPAVENVIIGCFEYD  295 (632)
Q Consensus       261 ~ei~~~i~~~~~~p~---------------------------------------------~p~~lp~~l~~LI~~cL~~D  295 (632)
                      .+.+..+......|.                                             .+..+++++.+||.+||+.|
T Consensus       237 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d  316 (388)
T 3oz6_A          237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN  316 (388)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred             HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence            776665542221111                                             12367899999999999999


Q ss_pred             cCCCCCHHHHHH
Q 006772          296 LRNRPLMADILH  307 (632)
Q Consensus       296 P~~RPs~~ell~  307 (632)
                      |++|||+.|+++
T Consensus       317 P~~R~t~~e~l~  328 (388)
T 3oz6_A          317 PNKRISANDALK  328 (388)
T ss_dssp             GGGSCCHHHHTT
T ss_pred             cccCCCHHHHhC
Confidence            999999999886

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=5.8e-42  Score=353.00  Aligned_cols=257  Identities=19%  Similarity=0.288  Sum_probs=205.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||+||+|.++.++      +.||||++..... ........++..++..+ +|+||+.+++++..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   74 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETH------EIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDK   74 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETT
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCC------ceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCC
Confidence            68999999999999999999998765      4899999975432 22222233334455555 6999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .++|||||++|++.+.+... .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        75 ~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           75 KLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             EEEEEEECCSEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             EEEEEEecCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            99999999999998887654 46899999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC-CCCCCHHHHHHHHHhhccCC------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEIYHSVVIKKEKP------  274 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P-F~~~~~~ei~~~i~~~~~~p------  274 (632)
                      .   ........||+.|+|||++.+.  ..++.++|||||||++|||++|..| |.+.+..+....+......+      
T Consensus       154 ~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~  228 (292)
T 3o0g_A          154 P---VRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP  228 (292)
T ss_dssp             C---CSCCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred             c---cccccCCccccCCcChHHHcCC--CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhh
Confidence            2   1223445789999999998743  2478999999999999999998777 55556665555544321111      


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccC
Q 006772          275 ---------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN  318 (632)
Q Consensus       275 ---------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~  318 (632)
                                           .....+++++.+||.+||+.||++|||++|+++      +++|.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~  287 (292)
T 3o0g_A          229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ------HPYFS  287 (292)
T ss_dssp             TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGT
T ss_pred             hhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc------Ccccc
Confidence                                 112357899999999999999999999999886      56664

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3.2e-42  Score=361.81  Aligned_cols=271  Identities=17%  Similarity=0.241  Sum_probs=214.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+-.++|++.+.||+|+||+||+|.+..++      +.||||++......  .. +..+..++..+.+|+||+.+++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~--~~-~~~E~~~l~~l~~h~~i~~~~~~~~   75 (330)
T 2izr_A            5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTN------EYVAIKLEPMKSRA--PQ-LHLEYRFYKQLGSGDGIPQVYYFGP   75 (330)
T ss_dssp             CEETTTEEEEEECCC-CTTSEEEEEETTTT------EEEEEEEEETTCSS--CC-HHHHHHHHHHHCSCTTSCCEEEEEE
T ss_pred             EEEcCCeEEEEEeeccCCceEEEEEECCCC------cEEEEEEeccccch--HH-HHHHHHHHHHhhCCCCCCEEEEEEe
Confidence            344578999999999999999999987655      48999998754322  12 2334456677778999999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc-----EEEEec
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ-----LVLGDF  193 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~-----vkL~DF  193 (632)
                      .++..|+||||+.|+|.+++... .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.     +||+||
T Consensus        76 ~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DF  154 (330)
T 2izr_A           76 CGKYNAMVLELLGPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDF  154 (330)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCC
T ss_pred             cCCccEEEEEeCCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEc
Confidence            99999999999988899888754 468999999999999999999999999999999999999999887     999999


Q ss_pred             CCceeccCCCCCC----CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC---CHHHHHHH
Q 006772          194 GIPYLLLGRSLSD----SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK---SVEEIYHS  266 (632)
Q Consensus       194 Glak~~~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~---~~~ei~~~  266 (632)
                      |+++.........    .......||+.|+|||++.+   ..++.++|||||||++|||++|..||.+.   ...+.+..
T Consensus       155 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~  231 (330)
T 2izr_A          155 ALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG---KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQK  231 (330)
T ss_dssp             TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHH
T ss_pred             ccceeeecCCCCccccccccCCcCCCccccChHHHcC---CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHH
Confidence            9998754322111    11245689999999999974   36889999999999999999999999984   34444444


Q ss_pred             HHhhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc----cCCCCcc
Q 006772          267 VVIKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV----YNDGEWT  323 (632)
Q Consensus       267 i~~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~----~~~~~w~  323 (632)
                      +........   ....+| ++.+++.+||+.||.+||++.+|++.|+.+....    ....+|+
T Consensus       232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~  294 (330)
T 2izr_A          232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI  294 (330)
T ss_dssp             HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred             HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence            432221111   123455 9999999999999999999999999888776542    2346776

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=8.3e-43  Score=362.36  Aligned_cols=266  Identities=20%  Similarity=0.367  Sum_probs=210.7

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||+||+|.+..++      +.||+|.+..........+.++ ..++..+ +||||+.+++++.
T Consensus         6 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~------~~va~K~~~~~~~~~~~~~~~E-~~~l~~l-~hp~iv~~~~~~~   77 (310)
T 3s95_A            6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETG------EVMVMKELIRFDEETQRTFLKE-VKVMRCL-EHPNVLKFIGVLY   77 (310)
T ss_dssp             EECGGGEEEEEEEECCSSEEEEEEEETTTC------CEEEEEEESCCCHHHHHHHHHH-HHHHTTC-CCTTBCCEEEEEE
T ss_pred             eeChhHeeccceecCCCCEEEEEEEECCCC------cEEEEEEeccCCHHHHHHHHHH-HHHHHhC-CCcCcccEEEEEe
Confidence            467789999999999999999999998765      4899999876555544444444 3455555 6999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..++||||++| +|.+++... ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  156 (310)
T 3s95_A           78 KDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLAR  156 (310)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred             cCCeeEEEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccce
Confidence            99999999999985 777777553 4689999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCC-----------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHH-H
Q 006772          198 LLLGRSLSD-----------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY-H  265 (632)
Q Consensus       198 ~~~~~~~~~-----------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~-~  265 (632)
                      .........           ......+||+.|+|||++.+   ..++.++|||||||++|||++|..||......... .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~  233 (310)
T 3s95_A          157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING---RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG  233 (310)
T ss_dssp             ECC--------------------CCCCSCGGGCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS
T ss_pred             ecccccccccccccccccccccccccCCCcceeCHHHhcC---CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh
Confidence            763322111           01124579999999999974   36889999999999999999999998763221100 0


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      ...........|..+|+++.++|.+||+.||++||++.++++.|+.+....
T Consensus       234 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          234 LNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             BCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            000001112346788999999999999999999999999999998887543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.8e-42  Score=362.30  Aligned_cols=261  Identities=20%  Similarity=0.297  Sum_probs=196.1

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.++.++      +.||||++.............++..++..+ .||||+.+++++..++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   76 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTG------VYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTEN   76 (317)
T ss_dssp             ---------------CEEEEEECSSSC------CEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTT
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCC------cEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECC
Confidence            468999999999999999999987655      489999997543322222233344555555 6999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          122 KICIAMKFYEGSVGDRIAQQR----GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~----~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .+||||||++|+|.+++....    ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        77 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  156 (317)
T 2pmi_A           77 KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR  156 (317)
T ss_dssp             EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred             eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccce
Confidence            999999999999999887653    2468999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---  274 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---  274 (632)
                      .....   ........||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+......+   
T Consensus       157 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  231 (317)
T 2pmi_A          157 AFGIP---VNTFSSEVVTLWYRAPDVLMGS--RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES  231 (317)
T ss_dssp             ETTSC---CCCCCCCCSCCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTT
T ss_pred             ecCCC---cccCCCCcccccccCchHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            75322   1222345789999999998642  357899999999999999999999999988777666554321110   


Q ss_pred             -----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          275 -----------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       275 -----------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                                                   ..+..+++++.+||.+||+.||++|||+.|+++      ++++.+.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~------hp~f~~~  300 (317)
T 2pmi_A          232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH------HPWFAEY  300 (317)
T ss_dssp             TCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT------SGGGGGG
T ss_pred             HhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC------Chhhhcc
Confidence                                         112357899999999999999999999999886      5565443

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=5.9e-43  Score=375.54  Aligned_cols=265  Identities=23%  Similarity=0.339  Sum_probs=216.7

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...|+.++|++.+.||+|+||.||+|.+..++      +.||||+++..........+.++..++..+ +||||+.++++
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~  180 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADN------TLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGV  180 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEE
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCC------eEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEE
Confidence            34477899999999999999999999987654      489999987543322222233344555555 79999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++.+||||||++ |+|.+++... +..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       181 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~  259 (377)
T 3cbl_A          181 CTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM  259 (377)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred             EecCCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence            998899999999998 6888887653 34799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++........ .......+++.|+|||++..   +.++.++|||||||++|||++ |..||.+.+..+....+. .....
T Consensus       260 s~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~  334 (377)
T 3cbl_A          260 SREEADGVYA-ASGGLRQVPVKWTAPEALNY---GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRL  334 (377)
T ss_dssp             CEECTTSEEE-CCSSCCEEEGGGSCHHHHHH---CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-TTCCC
T ss_pred             ceecCCCcee-ecCCCCCCCcCcCCHhHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            9864322111 11112235778999999863   468899999999999999998 999999988877765554 44556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..|..+|+++.+||.+||+.||++||++.++++.|+.+..
T Consensus       335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            6788999999999999999999999999999999988753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2e-42  Score=354.45  Aligned_cols=265  Identities=21%  Similarity=0.352  Sum_probs=204.8

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++   .....||+|.+.........+.+.++..++..+ +||||+.+++++
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~   85 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI   85 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC-----CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCC---CCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEE
Confidence            4567789999999999999999999987543   233579999987644333333333444455555 799999999987


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                       .++..|+||||++| +|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        86 -~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  163 (281)
T 1mp8_A           86 -TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS  163 (281)
T ss_dssp             -CSSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----
T ss_pred             -ccCccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccc
Confidence             45678999999995 787777543 457999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......+|+.|+|||++.+   ..++.++|+|||||++|||++ |..||.+.+..+....+.. ...+.
T Consensus       164 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-~~~~~  237 (281)
T 1mp8_A          164 RYMEDSTY--YKASKGKLPIKWMAPESINF---RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLP  237 (281)
T ss_dssp             -----------------CCGGGCCHHHHHH---CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCC
T ss_pred             cccCcccc--cccccCCCcccccChhhccc---CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-CCCCC
Confidence            86533211  11223356889999999863   368899999999999999997 9999998887776666543 34556


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ++..+|+++.++|.+||+.||++||++.++++.|+.+..
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          238 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999987653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.5e-42  Score=361.88  Aligned_cols=273  Identities=19%  Similarity=0.306  Sum_probs=222.8

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...+..++|++.+.||+|+||.||+|.+..++.. .....||+|++...........+.++..++..+.+||||+.++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE-DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSS-CCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcc-cchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            3457789999999999999999999998765531 233589999997654433334344455666777789999999999


Q ss_pred             EEECCEEEEEEecCCC-CHHHHHHHhc------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          117 SVINGKICIAMKFYEG-SVGDRIAQQR------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~G-sL~d~l~~~~------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                      +..++.+|+||||++| +|.+++....            ...+++..++.++.||+.||+|||+++|+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            9999999999999985 8888886542            34689999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHH
Q 006772          184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEE  262 (632)
Q Consensus       184 ~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~e  262 (632)
                      .++.+||+|||+++....... ........||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.....
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSN-YIVKGNARLPVKWMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTT-SEECSSCEECGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             CCCeEEECccccccccccccc-eeecCCCCCCccccCHHHhcc---CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            999999999999976533211 111233457889999999874   368899999999999999999 999999876555


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       263 i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ....+......+..|..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            5555555556666788899999999999999999999999999999887653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.2e-42  Score=357.13  Aligned_cols=257  Identities=20%  Similarity=0.274  Sum_probs=200.9

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-------------------------HH
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-------------------------KV   92 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-------------------------~~   92 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||||++.+......                         .+
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (298)
T 2zv2_A            8 DCVQLNQYTLKDEIGKGSYGVVKLAYNENDN------TYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIE   81 (298)
T ss_dssp             --CEETTEEEEEEEEC--CCEEEEEEETTTT------EEEEEEEEECC-------------------------------C
T ss_pred             CceeecceEEEeEEeecCCEEEEEEEECCCC------cEEEEEEeehhhhhhhcccccccccccccccccccccccchHH
Confidence            3455689999999999999999999987665      4899999975432110                         11


Q ss_pred             HHHHHHHHhhhccCCCceeEeeEEEEE--CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 006772           93 FVNKFEELFPKFRESQSVCWLHGISVI--NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG  169 (632)
Q Consensus        93 ~~~~~~~il~~l~~h~~I~~l~~~~~~--~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~  169 (632)
                      .+.++..++..+ +||||+.+++++..  ++.+|+||||++| +|.+++   ..+.+++.+++.++.||+.||+|||+++
T Consensus        82 ~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~  157 (298)
T 2zv2_A           82 QVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK  157 (298)
T ss_dssp             HHHHHHHHHHTC-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhC-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            123333455555 79999999999886  5789999999985 554432   3357999999999999999999999999


Q ss_pred             ceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHH
Q 006772          170 LLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML  249 (632)
Q Consensus       170 IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Eml  249 (632)
                      |+||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+.....++.++|+|||||++|||+
T Consensus       158 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~  234 (298)
T 2zv2_A          158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV  234 (298)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH
T ss_pred             eeccCCCHHHEEECCCCCEEEecCCCcccccccc---ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH
Confidence            9999999999999999999999999998754321   1223457999999999987542222477899999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       250 tG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|..||.+.+.......+.........+..+++++.++|.+||+.||++||++.|+++
T Consensus       235 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          235 FGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            9999999988777666665433333334679999999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-42  Score=362.74  Aligned_cols=270  Identities=20%  Similarity=0.331  Sum_probs=220.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|.+..... ...++.||||+++..........+.++..++..+ +||||+.+++++
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~  119 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLP-YEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVC  119 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSST-TSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCC-CCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE
Confidence            35667899999999999999999999875321 1234689999998654433333344444556665 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeee
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR----------------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLN  174 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~----------------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRD  174 (632)
                      ..++..|+||||++ |+|.+++....                      ...+++.+++.++.||+.||+|||+++|+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            99999999999998 58888887642                      15799999999999999999999999999999


Q ss_pred             eeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCC
Q 006772          175 LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQ  253 (632)
Q Consensus       175 LKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~  253 (632)
                      |||+|||++.++.+||+|||+++........ .......||+.|+|||++.+   ..++.++|+|||||++|||++ |..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESIFY---NRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccc-cccCCCcccceecChhhhcc---CCcCcccccHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999765332111 12233467999999999874   368899999999999999999 999


Q ss_pred             CCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          254 PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       254 PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ||.+.+..++...+.. ...+..|..+|+++.++|.+||+.||++||++.++++.|+.+..
T Consensus       276 p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          276 PYYGMAHEEVIYYVRD-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             TTTTSCHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             cCCCCChHHHHHHHhC-CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            9999888877766653 44556788999999999999999999999999999999988764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.4e-42  Score=351.33  Aligned_cols=260  Identities=20%  Similarity=0.366  Sum_probs=214.8

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.+.||+|+||.||+|.+...       +.||+|++....... +.+. ++..++.++ +||||+.+++++
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vavK~~~~~~~~~-~~~~-~E~~~l~~l-~h~~i~~~~~~~   74 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNK-------DKVAIKTIREGAMSE-EDFI-EEAEVMMKL-SHPKLVQLYGVC   74 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTT-------EEEEEEEECTTSBCH-HHHH-HHHHHHHTC-CCTTBCCEEEEE
T ss_pred             EEeChhhceeeheecCCCccEEEEEEecCC-------CeEEEEEecccccCH-HHHH-HHHHHHHhC-CCCCEeeEEEEE
Confidence            457889999999999999999999998642       379999997654322 3333 344555555 589999999999


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..++..|+||||++| +|.+++.. ....+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  153 (269)
T 4hcu_A           75 LEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT  153 (269)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred             ecCCceEEEEEeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccc
Confidence            999999999999985 67777654 3457999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......||+.|+|||++.+   ..++.++|+|||||++|||++ |..||.+.+..+....+.. ...+.
T Consensus       154 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~-~~~~~  227 (269)
T 4hcu_A          154 RFVLDDQY--TSSTGTKFPVKWASPEVFSF---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLY  227 (269)
T ss_dssp             GGBCCHHH--HSTTSTTCCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCC
T ss_pred             cccccccc--ccccCcccccccCCHHHhcC---CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc-CccCC
Confidence            76432211  11223456889999999864   368899999999999999999 9999999988887776653 34555


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .|..+++++.+++.+||+.||++||++.++++.|+.+..
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999987753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.5e-42  Score=353.63  Aligned_cols=258  Identities=21%  Similarity=0.342  Sum_probs=197.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+..++|++.+.||+|+||.||+|.+..++      +.||||++....... ......++ ....+..+||||+.+++++
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~iv~~~~~~   75 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSG------QIMAVKRIRATVNSQEQKRLLMDL-DISMRTVDCPFTVTFYGAL   75 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEC---CHHHHHHHHHHH-HHHHTTCCCTTBCCEEEEE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCC------eEEEEEEeecccCcHHHHHHHHHH-HHHHHhCCCCeEEEEeeee
Confidence            456789999999999999999999987665      489999997643322 22233333 3334556899999999999


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecC
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ..++..|+||||++|+|.+.+...  .+..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T 3fme_A           76 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG  155 (290)
T ss_dssp             ECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred             eccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecC
Confidence            999999999999999988877653  346899999999999999999999998 99999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCC-CCCCCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhcc
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-VRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVVIKKE  272 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~i~~~~~  272 (632)
                      +++.....    .......||+.|+|||++... ....++.++|+|||||++|||++|..||... ..............
T Consensus       156 ~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  231 (290)
T 3fme_A          156 ISGYLVDD----VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS  231 (290)
T ss_dssp             ------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred             Cccccccc----ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC
Confidence            98765332    122334689999999997432 2346889999999999999999999999864 34444444443333


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....+..+++++.++|.+||+.||++||++.++++
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            33334578999999999999999999999999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-42  Score=366.04  Aligned_cols=273  Identities=20%  Similarity=0.320  Sum_probs=218.4

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...++.++|++.+.||+|+||.||+|.+..... ......||||++...........+.++..++..+..||||+.++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISK-TGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSS-SSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeecccc-CCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            345777999999999999999999999854221 1234689999997543332233344455667777789999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeee
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRG---------------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLN  174 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~---------------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRD  174 (632)
                      +..++..|+||||++ |+|.+++.....                     ..+++..++.++.||+.||+|||+++|+|||
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999999999999997 588888865432                     2489999999999999999999999999999


Q ss_pred             eeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCC
Q 006772          175 LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQ  253 (632)
Q Consensus       175 LKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~  253 (632)
                      |||+|||++.++.+||+|||+++....... ........||+.|+|||++.+   +.++.++|||||||++|||++ |..
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~  273 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSN-YVVRGNARLPVKWMAPESLFE---GIYTIKSDVWSYGILLWEIFSLGVN  273 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTT-SEEETTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCcc-ceeccCccCccCccCHHHhcc---CCCChhHhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999976533211 111233457889999999864   468899999999999999998 999


Q ss_pred             CCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          254 PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       254 PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ||.+.+.......+......+..|..+++++.+||.+||+.||.+||++.++++.|+.+..
T Consensus       274 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          274 PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             SSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             CcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            9998775555555555566677788899999999999999999999999999999987654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=4.2e-42  Score=358.89  Aligned_cols=260  Identities=21%  Similarity=0.287  Sum_probs=204.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|++.+.||+|+||.||+|.+.. +      +.||+|++...... .......++..++..+ +||||+.+++++..+
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~   91 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQ-G------RIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSE   91 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETT-S------CEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCS
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECC-C------CEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccC
Confidence            4789999999999999999999853 2      48999999654321 1122233344555555 699999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +.+||||||++|++.+.+... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        92 ~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           92 RCLTLVFEFMEKDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             SCEEEEEECCSEEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             CEEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            999999999999998888654 3579999999999999999999999999999999999999999999999999998753


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-----
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-----  275 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-----  275 (632)
                      ..   ........||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+......+.     
T Consensus       171 ~~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  245 (311)
T 3niz_A          171 IP---VRSYTHEVVTLWYRAPDVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP  245 (311)
T ss_dssp             SC---CC---CCCCCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSG
T ss_pred             CC---cccccCCcccCCcCCHHHhcCC--CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhh
Confidence            22   1223345789999999998642  3578999999999999999999999998765554444432111110     


Q ss_pred             -----------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCC
Q 006772          276 -----------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE  321 (632)
Q Consensus       276 -----------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~  321 (632)
                                             ..+.+++++.+||.+||+.||++|||+.|+++      +++|.+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~~  308 (311)
T 3niz_A          246 QVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN------HPYFKDLD  308 (311)
T ss_dssp             GGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT------SGGGTTSC
T ss_pred             hhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc------CcccccCC
Confidence                                   12356789999999999999999999999886      67776554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=6.3e-42  Score=360.15  Aligned_cols=278  Identities=20%  Similarity=0.317  Sum_probs=223.0

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCC-CcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSAD-DFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~-~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      |......+..++|++.+.||+|+||.||+|.+..... ....+..||||++...........+.++..++..+.+||||+
T Consensus        25 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv  104 (334)
T 2pvf_A           25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII  104 (334)
T ss_dssp             CCCTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEe
Confidence            3333455777999999999999999999999864322 112446899999976543333333444456667777899999


Q ss_pred             EeeEEEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeee
Q 006772          112 WLHGISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLK  176 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLK  176 (632)
                      .+++++..++.+|+||||++ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+|||||
T Consensus       105 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  184 (334)
T 2pvf_A          105 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA  184 (334)
T ss_dssp             CEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCc
Confidence            99999999999999999998 58888886543              1348999999999999999999999999999999


Q ss_pred             CCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCC
Q 006772          177 PSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPW  255 (632)
Q Consensus       177 P~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF  255 (632)
                      |+|||++.++.+||+|||+++........ .......+|+.|+|||++.+   ..++.++|||||||++|||++ |..||
T Consensus       185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~  260 (334)
T 2pvf_A          185 ARNVLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLMWEIFTLGGSPY  260 (334)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECTTTSSE-ECCSCCCCCGGGCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cceEEEcCCCCEEEccccccccccccccc-cccCCCCcccceeChHHhcC---CCcChHHHHHHHHHHHHHHHhCCCCCc
Confidence            99999999999999999999875432111 11223457889999999864   357899999999999999999 99999


Q ss_pred             CCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          256 FGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       256 ~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      .+.+..++...+. ....+..+..+++++.++|.+||+.||.+||++.++++.|+.+...
T Consensus       261 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          261 PGIPVEELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             TTCCHHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            9988887766554 3445667889999999999999999999999999999999887653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.3e-42  Score=356.82  Aligned_cols=270  Identities=21%  Similarity=0.324  Sum_probs=218.9

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...+..++|++.+.||+|+||.||+|.+..... ...+..||||++...........+.++..++..+ +||||+.++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~   94 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKG-RAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGA   94 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGG-CSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCc-ccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEE
Confidence            455677999999999999999999999854321 1234689999997644333333333444555555 79999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceee
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRG----------------------GKLPLPDILRYGIQLAKGISDLHSIGLLVL  173 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~----------------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHR  173 (632)
                      +..++..++||||++ |+|.+++.....                      ..+++.+++.++.||+.||+|||+++|+||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            999999999999998 688888876432                      348999999999999999999999999999


Q ss_pred             eeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CC
Q 006772          174 NLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GI  252 (632)
Q Consensus       174 DLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~  252 (632)
                      ||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+   ..++.++|+|||||++|||++ |.
T Consensus       175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~  250 (314)
T 2ivs_A          175 DLAARNILVAEGRKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAIESLFD---HIYTTQSDVWSFGVLLWEIVTLGG  250 (314)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccchheEEEcCCCCEEEcccccccccccccc-ceeccCCCCcccccChhhhcC---CCcCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999986533211 111233457889999999874   357899999999999999999 99


Q ss_pred             CCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          253 QPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       253 ~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .||.+.+..++...+. ....+..+..+++++.++|.+||+.||++||++.++++.|+.+.
T Consensus       251 ~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          251 NPYPGIPPERLFNLLK-TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             CSSTTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHhh-cCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999988777665554 34456678899999999999999999999999999999998765

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-41  Score=364.91  Aligned_cols=259  Identities=19%  Similarity=0.321  Sum_probs=214.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||+|++.+....      ..+. +..+..++..+ .||||+.++++
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~------~~~avK~i~~~~~~~~~~~~~~~~-~~~E~~il~~l-~hpnIv~l~~~   83 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTG------LEYAAKFIKKRQSRASRRGVCREE-IEREVSILRQV-LHPNIITLHDV   83 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEBCSSTTCSSSBCHHH-HHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCC------CEEEEEEEEccccccccchhHHHH-HHHHHHHHHhC-CCcCCCcEEEE
Confidence            67999999999999999999988765      48999999764321      1233 33344555555 59999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC----cEEEE
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLG  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g----~vkL~  191 (632)
                      +..++.+||||||++ |+|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++    .+||+
T Consensus        84 ~~~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~  161 (361)
T 2yab_A           84 YENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (361)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EEeCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence            999999999999997 688887754  45799999999999999999999999999999999999999877    79999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++.....    ......+||+.|+|||++.+   ..++.++|+|||||++|+|++|..||.+.+..+.+..+....
T Consensus       162 DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~  234 (361)
T 2yab_A          162 DFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVS  234 (361)
T ss_dssp             CCSSCEECCTT----CCCCCCCSCGGGCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC
T ss_pred             ecCCceEcCCC----CccccCCCCccEECchHHcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Confidence            99999875432    22345679999999999974   368899999999999999999999999999888887776432


Q ss_pred             cCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          272 EKP--CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       272 ~~p--~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                      ...  .++..+++++.+||.+||..||.+||++.|+++      ++++...+|..
T Consensus       235 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~~~~~~~  283 (361)
T 2yab_A          235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR------HPWITPVDTQQ  283 (361)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT------STTTSCSSHHH
T ss_pred             CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc------CcCcCCCchhh
Confidence            221  122578999999999999999999999999886      67777766654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.4e-42  Score=372.86  Aligned_cols=271  Identities=17%  Similarity=0.309  Sum_probs=207.0

Q ss_pred             CCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           35 QTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        35 ~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      +....++.++|++.+.||+|+||.||+|++....   ..+..||||+++..........+.++..++..+ +|+||+.++
T Consensus        37 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~  112 (373)
T 2qol_A           37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPS---KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLE  112 (373)
T ss_dssp             TTSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTT---SCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             HHHhhcCHhhceeeeEEeeCCCeEEEEEEEecCC---CCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence            3445677789999999999999999999876332   233579999997643333333333444555555 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++..++..||||||++ |+|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus       113 ~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  191 (373)
T 2qol_A          113 GVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF  191 (373)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEeeCCceEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcC
Confidence            99999999999999997 588777754 3457999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      |+++................+|+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+..++...+.. ..
T Consensus       192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~-~~  267 (373)
T 2qol_A          192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY---RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GY  267 (373)
T ss_dssp             ----------------------CTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT-TE
T ss_pred             ccccccccCCccceeccCCCcCCCccChhhhcc---CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CC
Confidence            999865432211111122345788999999874   468899999999999999998 9999999888877766553 33


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ....+..++.++.++|.+||+.||++||++.++++.|+.+..
T Consensus       268 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            445577899999999999999999999999999999988754

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=4.7e-42  Score=356.34  Aligned_cols=253  Identities=19%  Similarity=0.276  Sum_probs=202.1

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-----hhHHHHHHHHHHHhhhcc--CCCceeEe
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-----DCAKVFVNKFEELFPKFR--ESQSVCWL  113 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-----~~~~~~~~~~~~il~~l~--~h~~I~~l  113 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||||++.....     .......+ +..++..+.  .||||+.+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~-e~~~l~~l~~~~h~niv~~   79 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSG------HFVALKSVRVPNGGGGGGGLPISTVR-EVALLRRLEAFEHPNVVRL   79 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTC------CEEEEEEEEEECCCTTSSCCCHHHHH-HHHHHHHHHHHCCTTBCCE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEecccccccccccchhHHH-HHHHHHHHhhcCCCCeEEe
Confidence            4578999999999999999999987665      4899999864221     00112222 223333332  69999999


Q ss_pred             eEEEEECC-----EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          114 HGISVING-----KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       114 ~~~~~~~~-----~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                      ++++....     .+++||||+.|+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus        80 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~  159 (308)
T 3g33_A           80 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV  159 (308)
T ss_dssp             EEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCE
T ss_pred             eeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCE
Confidence            99998765     6899999999999999877655569999999999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV  268 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~  268 (632)
                      ||+|||+++.....    .......||+.|+|||++.+   ..++.++|||||||++|||++|..||.+.+..+....+.
T Consensus       160 kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  232 (308)
T 3g33_A          160 KLADFGLARIYSYQ----MALTPVVVTLWYRAPEVLLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF  232 (308)
T ss_dssp             EECSCSCTTTSTTC----CCSGGGGCCCSSCCHHHHHT---SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHH
T ss_pred             EEeeCccccccCCC----cccCCccccccccCchHHcC---CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999998754321    22345678999999999874   368899999999999999999999999988877666655


Q ss_pred             hhccCCC-------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 IKKEKPC-------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ~~~~~p~-------------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .....+.                         ..+.+++++.+||.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            3221111                         11357899999999999999999999999886

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.9e-42  Score=367.66  Aligned_cols=282  Identities=16%  Similarity=0.196  Sum_probs=206.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHH--HHHH-------HHHhhhccCCCce
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKF-------EELFPKFRESQSV  110 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~--~~~~-------~~il~~l~~h~~I  110 (632)
                      +..++|++.+.||+|+||.||+|.+..+.. ....+.||||++.........+.  ..+.       +........|+||
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSES-VGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSC-CCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccc-cccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            345799999999999999999999876532 22346899999876543221111  1110       0011223469999


Q ss_pred             eEeeEEEEEC----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe--c
Q 006772          111 CWLHGISVIN----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS--E  184 (632)
Q Consensus       111 ~~l~~~~~~~----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld--~  184 (632)
                      +.+++++...    ...||||||+.|+|.+++.. ..+.+++..++.++.||+.||+|||+++|+||||||+|||++  .
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence            9999998764    56899999997788877765 346899999999999999999999999999999999999999  8


Q ss_pred             CCcEEEEecCCceeccCCCCC----CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH
Q 006772          185 HDQLVLGDFGIPYLLLGRSLS----DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV  260 (632)
Q Consensus       185 ~g~vkL~DFGlak~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~  260 (632)
                      ++.+||+|||+++.+......    ........||+.|||||++.+.   .++.++|||||||++|||++|+.||.+...
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV---APSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC---CCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence            899999999999876432211    1112345699999999999743   589999999999999999999999986432


Q ss_pred             HHHHHHHHhhcc--------CCC-CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc----ccCCCCccccc
Q 006772          261 EEIYHSVVIKKE--------KPC-IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA----VYNDGEWTGLG  326 (632)
Q Consensus       261 ~ei~~~i~~~~~--------~p~-~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~----~~~~~~w~~~~  326 (632)
                      ............        .+. .+..+|+++.++|..||+.||.+||++.+|++.|+.+...    .....+|....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~  345 (364)
T 3op5_A          267 DPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVE  345 (364)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC----
T ss_pred             CHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceEecc
Confidence            211111110000        011 1267899999999999999999999999999988877653    23345565444

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.8e-42  Score=356.58  Aligned_cols=246  Identities=22%  Similarity=0.322  Sum_probs=199.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.++||+|+||+||+|.+..++      +.||||++.....  ........+. ..+..+..|+||+.+++++..+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~e~-~~~~~~~~h~~iv~l~~~~~~~  129 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDG------RLYAVKRSMSPFRGPKDRARKLAEV-GSHEKVGQHPCCVRLEQAWEEG  129 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTS------CEEEEEEESSSCCSHHHHHHHHHHH-HHHHHHCCCTTBCCEEEEEEET
T ss_pred             hheeeeheeccCCCeEEEEEEECCCC------eEEEEEEecccccChHHHHHHHHHH-HHHHHhcCCCcEEEEEEEEEeC
Confidence            67999999999999999999988655      4899999865332  2222222222 3344556899999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +.+||||||+.|+|.+.+... +..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus       130 ~~~~lv~e~~~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          130 GILYLQTELCGPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             TEEEEEEECCCCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             CEEEEEEeccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            999999999999999888765 4579999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      ..    .......||+.|+|||++.+    .++.++|||||||++|||++|..||.+...   ...+......+.++..+
T Consensus       209 ~~----~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~  277 (311)
T 3p1a_A          209 TA----GAGEVQEGDPRYMAPELLQG----SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGL  277 (311)
T ss_dssp             ----------CCCCCGGGCCGGGGGT----CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTS
T ss_pred             cC----CCCcccCCCccccCHhHhcC----CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCC
Confidence            32    12234569999999999863    588999999999999999999877765332   22333333333455789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++++.++|.+||+.||++||++.|+++
T Consensus       278 ~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          278 SSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            999999999999999999999999886

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.2e-41  Score=360.96  Aligned_cols=251  Identities=22%  Similarity=0.311  Sum_probs=203.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc----CCCceeEeeE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR----ESQSVCWLHG  115 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~----~h~~I~~l~~  115 (632)
                      +-.++|++.++||+|+||.||+|.+..++      +.||||++...... ... ...+..++..+.    .|+||+.+++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~-~~~-~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNK------KYYAVKVVRNIKKY-TRS-AKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECSCHHH-HHH-HHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCC------eEEEEEEeccchhh-hhh-hHHHHHHHHHhcccCCCCCCeecccc
Confidence            33578999999999999999999987655      48999999753322 122 233334445554    5999999999


Q ss_pred             EEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-----------
Q 006772          116 ISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-----------  184 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-----------  184 (632)
                      ++...+..||||||+.|+|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.           
T Consensus       104 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~  183 (360)
T 3llt_A          104 KFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVR  183 (360)
T ss_dssp             EEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred             eeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchh
Confidence            999999999999999889999998766567999999999999999999999999999999999999975           


Q ss_pred             --------------CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh
Q 006772          185 --------------HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT  250 (632)
Q Consensus       185 --------------~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt  250 (632)
                                    ++.+||+|||+++....      ......||+.|+|||++.+   ..++.++|||||||++|||++
T Consensus       184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~  254 (360)
T 3llt_A          184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSD------YHGSIINTRQYRAPEVILN---LGWDVSSDMWSFGCVLAELYT  254 (360)
T ss_dssp             CTTTCCEEEEEEESCCCEEECCCTTCEETTS------CCCSCCSCGGGCCHHHHTT---CCCCTTHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCEEEEeccCceecCC------CCcCccCcccccCcHHHcC---CCCCCccchHHHHHHHHHHHH
Confidence                          78999999999986422      2234578999999999974   368999999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHhhccCCC------------------------CC--------------------CCCCHHHHH
Q 006772          251 GIQPWFGKSVEEIYHSVVIKKEKPC------------------------IP--------------------SGLPPAVEN  286 (632)
Q Consensus       251 G~~PF~~~~~~ei~~~i~~~~~~p~------------------------~p--------------------~~lp~~l~~  286 (632)
                      |+.||.+.+..+....+.......+                        +|                    ...++.+.+
T Consensus       255 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (360)
T 3llt_A          255 GSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCD  334 (360)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHH
Confidence            9999998887665554432111100                        11                    122477889


Q ss_pred             HHHHhhhcCcCCCCCHHHHHH
Q 006772          287 VIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       287 LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ||.+||+.||++|||+.|+++
T Consensus       335 li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          335 FLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHhcCChhhCCCHHHHhc
Confidence            999999999999999999885

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=6.1e-42  Score=352.53  Aligned_cols=251  Identities=20%  Similarity=0.274  Sum_probs=199.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+. ++      +.||+|++....... ......++..++..+ +||||+.+++++..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~-~~------~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   73 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN-YG------ETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKK   73 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TS------CEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSS
T ss_pred             ccchhhhhcccCCCEEEEEEEcC-CC------CEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCC
Confidence            68999999999999999999873 23      489999996543221 112223344555555 6999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .+|+||||++|+|.+.+... .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        74 ~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           74 RLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (288)
T ss_dssp             CEEEEEECCSEEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             eEEEEEEecCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence            99999999999988887643 35799999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC-------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP-------  274 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p-------  274 (632)
                      .   ........||+.|+|||++.+.  ..++.++|+|||||++|||++|..||.+.+..+....+......+       
T Consensus       153 ~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
T 1ob3_A          153 P---VRKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN  227 (288)
T ss_dssp             ------------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             c---ccccccccccccccCchheeCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchh
Confidence            1   1122345789999999998642  357899999999999999999999999988766555544221110       


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          .+...+++++.+||.+||+.||++||++.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                                112457899999999999999999999999886

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.7e-42  Score=361.00  Aligned_cols=264  Identities=20%  Similarity=0.254  Sum_probs=205.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ...++|++.+.||+|+||.||+|.+..++      +.||||++....... ......++..++..+ +|+||+.+++++.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  103 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTN------ETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIH  103 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTT------EEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCC------ceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEe
Confidence            34578999999999999999999988765      489999997543221 122223344555555 7999999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-----cCCcEEEEec
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-----EHDQLVLGDF  193 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-----~~g~vkL~DF  193 (632)
                      .++.+||||||++|+|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++     .++.+||+||
T Consensus       104 ~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df  181 (329)
T 3gbz_A          104 HNHRLHLIFEYAENDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDF  181 (329)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred             cCCEEEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence            99999999999999999988653  4799999999999999999999999999999999999994     4556999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++.....   ........||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+......
T Consensus       182 g~a~~~~~~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  256 (329)
T 3gbz_A          182 GLARAFGIP---IRQFTHEIITLWYRPPEILLGS--RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGL  256 (329)
T ss_dssp             THHHHHC--------------CCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             CCccccCCc---ccccCCCcCCccccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCC
Confidence            999765321   1223345789999999998743  24789999999999999999999999998877766655433222


Q ss_pred             CCC----------------------------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          274 PCI----------------------------PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       274 p~~----------------------------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      +..                            +..+++++.+||.+||+.||++|||+.|+++      +++|.+.+|+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~~~~~  328 (329)
T 3gbz_A          257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE------HPYFSHNDFD  328 (329)
T ss_dssp             CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT------SGGGSSSCSC
T ss_pred             CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC------CcccCCCCCC
Confidence            110                            0116799999999999999999999999886      8888888875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-41  Score=358.85  Aligned_cols=270  Identities=19%  Similarity=0.320  Sum_probs=212.1

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...|+.++|++.+.||+|+||.||+|.+..++.  .....||||+++..........+.++..++..+ .|+||+.++++
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~  114 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG--KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGV  114 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCCC--CccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEE
Confidence            456788999999999999999999999875442  223479999997654333333333344455555 79999999999


Q ss_pred             EEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +...+..+|||||++| +|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       115 ~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  193 (333)
T 1mqb_A          115 ISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL  193 (333)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             EecCCCcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCc
Confidence            9988999999999986 77777754 346899999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++................+|+.|+|||++.+   ..++.++|+|||||++|||++ |..||.+.+..++...+.. ...+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-~~~~  269 (333)
T 1mqb_A          194 SRVLEDDPEATYTTSGGKIPIRWTAPEAISY---RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRL  269 (333)
T ss_dssp             -----------------CCCGGGSCHHHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCC
T ss_pred             chhhccccccccccCCCCccccccCchhccc---CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-CCcC
Confidence            9865432211112223356889999999864   368899999999999999999 9999999888877766653 3455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+..+++++.++|.+||+.||++||++.++++.|+.+..
T Consensus       270 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            5678899999999999999999999999999999987764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.7e-41  Score=351.26  Aligned_cols=258  Identities=22%  Similarity=0.353  Sum_probs=204.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++.....  ......+.++..++..+ .||||+.+++++..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~   82 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILN------IKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEE   82 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTC------SEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEEC
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCC------CeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeee
Confidence            478999999999999999999987665      4899999865322  11222233333444454 69999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++..|+||||++| +|.+++...  +.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        83 ~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  160 (294)
T 4eqm_A           83 DDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA  160 (294)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence            9999999999985 888877654  4799999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---C
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---C  275 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---~  275 (632)
                      ......  .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||.+.+..+............   .
T Consensus       161 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  235 (294)
T 4eqm_A          161 LSETSL--TQTNHVLGTVQYFSPEQAKGE---ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTD  235 (294)
T ss_dssp             C---------------CCSSCCHHHHHTC---CCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHH
T ss_pred             cccccc--cccCccccCccccCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchh
Confidence            532211  122345799999999999754   57889999999999999999999999988776554444322211   2


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRP-LMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RP-s~~ell~~Le~~~  313 (632)
                      .+..+|+.+.++|.+||+.||.+|| ++.++++.|+.+.
T Consensus       236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            3467899999999999999999999 8999999887654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=8.8e-42  Score=349.96  Aligned_cols=262  Identities=22%  Similarity=0.354  Sum_probs=210.0

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHH------HHHHHHHHHhhhccC
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK------VFVNKFEELFPKFRE  106 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~------~~~~~~~~il~~l~~  106 (632)
                      |....+.+..++|++.+.||+|+||.||+|.+..++      +.||||++.........      ..+.++..++..+ +
T Consensus         9 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~   81 (287)
T 4f0f_A            9 PKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N   81 (287)
T ss_dssp             ---CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTC------CEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-C
T ss_pred             cchhhhhhhhccceehhccccCCceeEEEEEEcCCc------eEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-C
Confidence            445566788899999999999999999999987665      48999998653321111      2233344455555 6


Q ss_pred             CCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEe
Q 006772          107 SQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLS  183 (632)
Q Consensus       107 h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld  183 (632)
                      |+||+.+++++....  ++||||++ |+|.+.+... ...+++..++.++.|++.||+|||+++  |+||||||+|||++
T Consensus        82 h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~  158 (287)
T 4f0f_A           82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ  158 (287)
T ss_dssp             CTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEES
T ss_pred             CCCchhhheeecCCC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEe
Confidence            999999999886554  79999998 6887777643 458999999999999999999999999  99999999999999


Q ss_pred             cCCc-----EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC
Q 006772          184 EHDQ-----LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK  258 (632)
Q Consensus       184 ~~g~-----vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~  258 (632)
                      .++.     +||+|||+++....      ......||+.|+|||++... ...++.++|+|||||++|||++|..||...
T Consensus       159 ~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~g~~~y~aPE~~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  231 (287)
T 4f0f_A          159 SLDENAPVCAKVADFGLSQQSVH------SVSGLLGNFQWMAPETIGAE-EESYTEKADTYSFAMILYTILTGEGPFDEY  231 (287)
T ss_dssp             CCCTTCSCCEEECCCTTCBCCSS------CEECCCCCCTTSCGGGSSCS-SCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccCCCCceeEEeCCCCccccccc------cccccCCCccccCchhhccC-CCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            8876     99999999874321      23345789999999998533 345788999999999999999999999876


Q ss_pred             CHHH--HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          259 SVEE--IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       259 ~~~e--i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +..+  ....+......+.++..+|+++.++|.+||+.||++||++.++++.|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          232 SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             CCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             cccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            5333  3444445566677889999999999999999999999999999998875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=8.3e-42  Score=350.38  Aligned_cols=270  Identities=19%  Similarity=0.266  Sum_probs=209.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.......  . ...+..++..+.+++++..+..++..++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~--~-~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKHP--Q-LHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEEC---CC--C-HHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCC------ceEEEEeecccccch--H-HHHHHHHHHHhcCCCCCCeeeeecCCCCc
Confidence            78999999999999999999987665      489999875433211  1 23344556677788888888888888999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecCCceec
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFGlak~~  199 (632)
                      .++||||+.|+|.+++... ...+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++..
T Consensus        80 ~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           80 NVMVMELLGPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             eEEEEEccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            9999999988988888643 4579999999999999999999999999999999999999   78999999999999876


Q ss_pred             cCCCCCC----CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhhcc
Q 006772          200 LGRSLSD----SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE---EIYHSVVIKKE  272 (632)
Q Consensus       200 ~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~---ei~~~i~~~~~  272 (632)
                      .......    .......||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.+..   +....+.....
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  235 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  235 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCC---CCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence            4332211    122345799999999999743   6889999999999999999999999874321   22222221111


Q ss_pred             CC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc----cCCCCcccc
Q 006772          273 KP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV----YNDGEWTGL  325 (632)
Q Consensus       273 ~p---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~----~~~~~w~~~  325 (632)
                      ..   .....+|+++.++|.+||+.||++||++.++++.|+.+....    ....+|+.+
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 4hgt_A          236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred             cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhhc
Confidence            11   123678999999999999999999999999999988876543    234566643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=3.1e-42  Score=355.13  Aligned_cols=269  Identities=20%  Similarity=0.348  Sum_probs=206.9

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|++.....  ..++.||||++........+.+.++ ..++..+ +|+||+.+++++
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~   80 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQD--NTGEVVAVKKLQHSTEEHLRDFERE-IEILKSL-QHDNIVKYKGVC   80 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCS--SCCEEEEEEEESCCCHHHHHHHHHH-HHHHHTC-CCTTBCCEEEEE
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccC--CCCcEEEEEEcccCCHHHHHHHHHH-HHHHHhC-CCCCEeeEEEEE
Confidence            45677899999999999999999998643221  2346899999986655444444443 3455555 699999999988


Q ss_pred             EE--CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          118 VI--NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       118 ~~--~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ..  ...+++||||++ |+|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  159 (295)
T 3ugc_A           81 YSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG  159 (295)
T ss_dssp             CHHHHTSCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred             ecCCCCceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCc
Confidence            54  356899999997 5888887654 3469999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH------------
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE------------  262 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e------------  262 (632)
                      +++................||+.|+|||++.+   ..++.++|||||||++|||++|..||.......            
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T 3ugc_A          160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTE---SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM  236 (295)
T ss_dssp             SCC-------------CTTCGGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHH
T ss_pred             ccccccCCcceeeeccCCCCccceeCcHHhcC---CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccch
Confidence            99865432211122233457888999999874   368899999999999999999999986532210            


Q ss_pred             ---HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          263 ---IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       263 ---i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                         ..............|..+|+++.++|.+||+.||++||++.++++.|+.+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence               1111223344566788999999999999999999999999999999988764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.3e-41  Score=361.80  Aligned_cols=250  Identities=21%  Similarity=0.295  Sum_probs=208.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      +.|++.+.||+|+||.||+|.+..++      +.||||++......  .....+.++..++..+ +||||+.+++++..+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  126 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNS------EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLRE  126 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEET
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCC------eEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEC
Confidence            45999999999999999999987655      48999999754322  1112223334455555 699999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +..||||||+.|++.+.+... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus       127 ~~~~lv~e~~~g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          127 HTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             TEEEEEEECCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             CeEEEEEecCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            999999999999999888654 4589999999999999999999999999999999999999999999999999987542


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~l  280 (632)
                      .       .....||+.|+|||++.+...+.++.++|||||||++|||++|..||.+.+..+....+.........+..+
T Consensus       206 ~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (348)
T 1u5q_A          206 P-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW  278 (348)
T ss_dssp             S-------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTS
T ss_pred             C-------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Confidence            2       234579999999999864334578899999999999999999999999988776666665444444455789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.+.+||.+||+.||++||++.++++
T Consensus       279 ~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          279 SEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            999999999999999999999999886

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.9e-41  Score=348.11  Aligned_cols=261  Identities=18%  Similarity=0.268  Sum_probs=208.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|++..++      +.||||++.......  . ...+..++..+.+++++..+..+...++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~--~-~~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKHP--Q-LHIESKIYKMMQGGVGIPTIRWCGAEGD   78 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEEESCSSCC--H-HHHHHHHHHHHTTSTTCCCEEEEEEETT
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCC------cEEEEEEecCCcchh--H-HHHHHHHHHHhhcCCCCCccccccCCCC
Confidence            378999999999999999999987655      489999987543321  2 3344456677777788888877778889


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFGlak~  198 (632)
                      ..++||||+.|+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++.
T Consensus        79 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  157 (296)
T 3uzp_A           79 YNVMVMELLGPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEEEECCCCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             ceEEEEEecCCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence            99999999988999888643 4579999999999999999999999999999999999999   4889999999999987


Q ss_pred             ccCCCCCC----CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhhc
Q 006772          199 LLGRSLSD----SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV---EEIYHSVVIKK  271 (632)
Q Consensus       199 ~~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~---~ei~~~i~~~~  271 (632)
                      ........    .......||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.+.   .+.+..+....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  234 (296)
T 3uzp_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  234 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCChhhhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc
Confidence            64432111    112445799999999999743   688999999999999999999999987432   22222322211


Q ss_pred             cCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          272 EKP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       272 ~~p---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ...   ..+..+|+++.++|.+||+.||++||++.++++.|+.+...
T Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            111   23367899999999999999999999999999999887654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.7e-42  Score=369.32  Aligned_cols=270  Identities=21%  Similarity=0.322  Sum_probs=216.7

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|.+..... ....+.||||+++.............+..++..+ +|+||+.+++++
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~  143 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPN-DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVS  143 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC------CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCC-CCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence            34667899999999999999999999764321 1234689999997643333332233344555555 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRG-----GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QL  188 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~-----~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~v  188 (632)
                      ..++..||||||++ |+|.+++.....     ..+++.+++.++.||+.||+|||+++|+||||||+|||++.++   .+
T Consensus       144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence            99999999999997 588888876532     4689999999999999999999999999999999999999555   59


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i  267 (632)
                      ||+|||+++....... ........||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+..++...+
T Consensus       224 kL~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i  299 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGY-YRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  299 (367)
T ss_dssp             EECCCHHHHHHHHHSS-CTTCCGGGSCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             EECCCccccccccccc-cccCCCcCCcccEECHHHhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            9999999975432211 112234568999999999864   368999999999999999998 99999999888877766


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .. ...+..+..+++++.+||.+||+.||++||++.++++.|+.+..
T Consensus       300 ~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          300 TS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             Hc-CCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            53 44556678899999999999999999999999999999987654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-41  Score=348.86  Aligned_cols=267  Identities=17%  Similarity=0.309  Sum_probs=215.3

Q ss_pred             CcCCCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .++.++|.+.+ .||+|+||.||+|.+....    .+..||||+++..........+.++..++..+ +||||+.+++++
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   79 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRK----KQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC   79 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC-------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCC----CcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe
Confidence            46678899987 9999999999999875432    23589999998654333333334444555665 799999999998


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                       ..+..++||||++| +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus        80 -~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~  157 (287)
T 1u59_A           80 -QAEALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS  157 (287)
T ss_dssp             -ESSSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTC
T ss_pred             -cCCCcEEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccce
Confidence             56679999999985 77776643 3457999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +................||+.|+|||++.+   ..++.++|+|||||++|||++ |..||.+.+..++...+. ....+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-~~~~~~  233 (287)
T 1u59_A          158 KALGADDSYYTARSAGKWPLKWYAPECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRME  233 (287)
T ss_dssp             EECTTCSCEECCCCSSCCCGGGCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-TTCCCC
T ss_pred             eeeccCcceeeccccccccccccCHHHhcc---CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-cCCcCC
Confidence            876433221122233457899999999864   357889999999999999998 999999988777666554 345566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      +|..+|+++.++|.+||+.||++||++.++++.|+.+....
T Consensus       234 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  274 (287)
T 1u59_A          234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  274 (287)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            78899999999999999999999999999999998876543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=9.5e-42  Score=366.52  Aligned_cols=269  Identities=13%  Similarity=0.189  Sum_probs=207.6

Q ss_pred             cCCCCeEEEeEEccc--CceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           40 IDPTSLKLKHRIGRG--PFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        40 I~~~~y~l~~~IG~G--~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+.++|++.+.||+|  +||.||+|.++.++      +.||||++..... ......+.++..++..+ +||||+.++++
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~   94 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTG------EYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRAT   94 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCC------CEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEE
Confidence            456899999999999  99999999998765      4899999975432 22233344444555555 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++.+||||||++ |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~  174 (389)
T 3gni_B           95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS  174 (389)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGG
T ss_pred             EEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccc
Confidence            999999999999998 6888888776557899999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCC----CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          196 PYLLLGRSL----SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       196 ak~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      +........    ........+||+.|+|||++.+. ...++.++|||||||++|||++|..||.+.+..+....+....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  253 (389)
T 3gni_B          175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT  253 (389)
T ss_dssp             CEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTT-SSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----
T ss_pred             ceeeccccccccccccccccccccccccCHHHHhcc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC
Confidence            875432211    11122334789999999999753 2368899999999999999999999998865443332221110


Q ss_pred             c--------------------------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 E--------------------------------------------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~--------------------------------------------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .                                            ...++..+++++.+||.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          254 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             ----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            0                                            11234568899999999999999999999999886


Q ss_pred             HHHhhhhcccCCCCc
Q 006772          308 AFESSQNAVYNDGEW  322 (632)
Q Consensus       308 ~Le~~~~~~~~~~~w  322 (632)
                            ++++....|
T Consensus       334 ------hp~f~~~~~  342 (389)
T 3gni_B          334 ------HSFFKQIKR  342 (389)
T ss_dssp             ------SGGGGGC--
T ss_pred             ------CHHHHHHhh
Confidence                  666655443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.7e-42  Score=355.92  Aligned_cols=272  Identities=21%  Similarity=0.326  Sum_probs=217.6

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+..... ...++.||||++...........+.++..++..+.+||||+.+++++.
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  101 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT  101 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSS-TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCc-cccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEe
Confidence            3567899999999999999999998754221 134468999999765443333334445566777778999999999987


Q ss_pred             EC-CEEEEEEecCCC-CHHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          119 IN-GKICIAMKFYEG-SVGDRIAQQRG--------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       119 ~~-~~l~LVmEy~~G-sL~d~l~~~~~--------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      .. +.+++||||++| +|.+++.....              ..+++..++.++.||+.||.|||+++|+||||||+|||+
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~  181 (316)
T 2xir_A          102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  181 (316)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE
Confidence            65 459999999984 88888765432              128999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      +.++.+||+|||+++...... .........||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+....
T Consensus       182 ~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  257 (316)
T 2xir_A          182 SEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  257 (316)
T ss_dssp             CGGGCEEECCCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             CCCCCEEECCCccccccccCc-cceeccCCCcceeecCchhhcc---ccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence            999999999999997653321 1112233467899999999864   368899999999999999998 99999887644


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +...........+..+..+++++.++|.+||+.||.+||++.++++.|+.+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            444444444556667888999999999999999999999999999999887643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.4e-42  Score=362.31  Aligned_cols=267  Identities=22%  Similarity=0.357  Sum_probs=210.9

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...+..++|++.+.||+|+||.||+|.+..++..  ....||+|.+...... ....+.+ +..++..+ +|+||+.+++
T Consensus         7 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--~~~kv~~K~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~iv~~~~   82 (325)
T 3kex_A            7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGES--IKIPVCIKVIEDKSGRQSFQAVTD-HMLAIGSL-DHAHIVRLLG   82 (325)
T ss_dssp             CCBCCTTTEEEEEEEECCSSCEEEEEEECCTTCS--CCEEEEEEEECCTTSCSCBCSCCH-HHHHHHTC-CCTTBCCEEE
T ss_pred             HhhcCHhHceeeeeeeecCCceEEEEEEcCCCce--EEEEEEEEeccccccHHHHHHHHH-HHHHHhcC-CCCCcCeEEE
Confidence            4556788999999999999999999998776531  2235888887543221 1112222 22334444 7999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++. ++..++||||+. |+|.+++... .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        83 ~~~-~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  160 (325)
T 3kex_A           83 LCP-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG  160 (325)
T ss_dssp             EEC-BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCS
T ss_pred             EEc-CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCC
Confidence            876 566899999998 6888877643 3579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++...... .........||+.|+|||++.+   +.++.++|||||||++|||++ |..||.+.+..++...+. ....
T Consensus       161 ~a~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~  235 (325)
T 3kex_A          161 VADLLPPDD-KQLLYSEAKTPIKWMALESIHF---GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-KGER  235 (325)
T ss_dssp             GGGGSCCCT-TCCC-----CCTTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-TTCB
T ss_pred             cccccCccc-ccccccCCCCcccccChHHhcc---CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCC
Confidence            998753322 1122234567889999999974   468999999999999999999 999999987776665554 3445


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +..|..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          236 LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            66778899999999999999999999999999999988754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.1e-41  Score=345.89  Aligned_cols=258  Identities=19%  Similarity=0.291  Sum_probs=212.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+...       ..||+|++...... ...+.++ ..++..+ +||||+.+++++.
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vavK~~~~~~~~-~~~~~~E-~~~l~~l-~h~~i~~~~~~~~   73 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKGQ-------YDVAVKMIKEGSMS-EDEFFQE-AQTMMKL-SHPKLVKFYGVCS   73 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTT-------EEEEEEEECBTTBC-HHHHHHH-HHHHHHC-CCTTBCCEEEEEC
T ss_pred             EechhheeeeeeeccCCCceEEEEEecCc-------eeEEEEEeccCCCc-HHHHHHH-HHHHHhC-CCCCEeeEEEEEc
Confidence            46678999999999999999999987642       37999999764432 2333333 3445555 5899999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..++||||++ |+|.+++... +..+++.+++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~  152 (268)
T 3sxs_A           74 KEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR  152 (268)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred             cCCceEEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccce
Confidence            9999999999997 5688777654 3469999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .......  .......+|+.|+|||++.+.   .++.++|+||||+++|||++ |..||...+..+....+.. ......
T Consensus       153 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~  226 (268)
T 3sxs_A          153 YVLDDQY--VSSVGTKFPVKWSAPEVFHYF---KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ-GHRLYR  226 (268)
T ss_dssp             ECCTTCE--EECCSCCCCGGGCCHHHHHHS---EEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCCC
T ss_pred             ecchhhh--hcccCCCcCcccCCHHHHhcc---CCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHc-CCCCCC
Confidence            6543211  112234567889999998743   57889999999999999999 9999999888777666543 445556


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      |..+++++.+++.+||+.||++||++.++++.|+.+.
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            7788999999999999999999999999999998765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=8.1e-42  Score=355.99  Aligned_cols=280  Identities=18%  Similarity=0.303  Sum_probs=221.8

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...+..++|++.+.||+|+||.||+|.+..... ....+.||||.+...........+.++..++..+ .|+||+.++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~   96 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVK-DEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGV   96 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEET-TEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccC-CCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEE
Confidence            344667899999999999999999998763211 0223589999997654333333333344555555 68999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQR--------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ  187 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~--------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~  187 (632)
                      +..++..++||||++ |+|.+++....        ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.
T Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~  176 (322)
T 1p4o_A           97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  176 (322)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe
Confidence            998899999999998 58888886542        146799999999999999999999999999999999999999999


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS  266 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~  266 (632)
                      +||+|||+++........ .......||+.|+|||++.+   ..++.++|+|||||++|||++ |..||.+.+..+....
T Consensus       177 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  252 (322)
T 1p4o_A          177 VKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF  252 (322)
T ss_dssp             EEECCTTCCCGGGGGGCE-EGGGSSEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred             EEECcCcccccccccccc-ccccCCCCCCCccChhhhcc---CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH
Confidence            999999998765332111 11223457899999999874   368899999999999999999 8999999888777766


Q ss_pred             HHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       267 i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      +.. ...+..+..+++++.++|.+||+.||.+||++.++++.|+......+....|.
T Consensus       253 ~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~  308 (322)
T 1p4o_A          253 VME-GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFY  308 (322)
T ss_dssp             HHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCST
T ss_pred             HHc-CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccccc
Confidence            553 34455678999999999999999999999999999999988766555443333

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2e-41  Score=349.38  Aligned_cols=268  Identities=22%  Similarity=0.326  Sum_probs=206.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+.....  ..++.||||++.............++..++..+ +|+||+.+++++.
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~   93 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGD--NTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICT   93 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSS--SCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccC--ccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEe
Confidence            3456779999999999999999998643221  344689999997544322222333444555555 6999999999988


Q ss_pred             EC--CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          119 IN--GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       119 ~~--~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .+  ..+++||||++| +|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        94 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  172 (302)
T 4e5w_A           94 EDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL  172 (302)
T ss_dssp             C---CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             cCCCceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccc
Confidence            76  678999999985 888877554 45799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC--------------CHH
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK--------------SVE  261 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~--------------~~~  261 (632)
                      ++................||..|+|||++.+.   .++.++|+|||||++|||++|..|+...              ...
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 4e5w_A          173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQS---KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV  249 (302)
T ss_dssp             CEECCTTCCEEECCCCTTCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHH
T ss_pred             cccccCCCcceeccCCCCCCccccCCeeecCC---CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCH
Confidence            98764432211223345688999999998643   5788999999999999999999875422              122


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ...............+..+++++.++|.+||+.||.+||++.++++.|+.+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            2222233344556678899999999999999999999999999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=9.9e-42  Score=358.27  Aligned_cols=266  Identities=21%  Similarity=0.341  Sum_probs=207.7

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++..  ....||+|.+..... .....+. ++..++..+ +|+||+.++++
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~-~E~~~l~~l-~h~~iv~~~~~   85 (327)
T 3poz_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEIL-DEAYVMASV-DNPHVCRLLGI   85 (327)
T ss_dssp             EECCGGGEEEEEEEEEETTEEEEEEEECC------CCEEEEEEEC-------CHHHHH-HHHHHHHHC-CBTTBCCEEEE
T ss_pred             hhcCHHHcccceEEeeCCCeEEEEEEEcCCCce--EEEEEEEeecccccCHHHHHHHH-HHHHHHHhC-CCCCEeEEEEE
Confidence            346678999999999999999999998765531  123579998865332 2223333 334455555 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++ .+++|||+. |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~-~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~  163 (327)
T 3poz_A           86 CLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             EESSS-EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred             EecCC-eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcc
Confidence            88755 778888887 6888887654 45799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++....... ........||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+..++...+. .....
T Consensus       164 a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~  238 (327)
T 3poz_A          164 AKLLGAEEK-EYHAEGGKVPIKWMALESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERL  238 (327)
T ss_dssp             HHHHTTTCC--------CCCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCC
T ss_pred             eeEccCCcc-cccccCCCccccccChHHhcc---CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-cCCCC
Confidence            987643221 112223457889999999974   468999999999999999999 999999988776655443 44556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+..++.++.+++.+||+.||++||++.++++.|+.+..
T Consensus       239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            6788899999999999999999999999999999887754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=6.4e-42  Score=363.63  Aligned_cols=264  Identities=21%  Similarity=0.304  Sum_probs=210.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||||++.+......     ++.+++.++.+||||+.+++++.+++.
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~-----~E~~~l~~~~~hp~iv~~~~~~~~~~~   90 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATN------MEFAVKIIDKSKRDPT-----EEIEILLRYGQHPNIITLKDVYDDGKY   90 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEETTTCCCH-----HHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEcccCChH-----HHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence            67999999999999999999998765      4899999976543321     223445566689999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC----CcEEEEecCCce
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH----DQLVLGDFGIPY  197 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~----g~vkL~DFGlak  197 (632)
                      +|+||||++ |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||+.++    +.+||+|||+++
T Consensus        91 ~~lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~  168 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK  168 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred             EEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence            999999998 588888764  3579999999999999999999999999999999999998543    359999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC---CCHHHHHHHHHhhccCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG---KSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~---~~~~ei~~~i~~~~~~p  274 (632)
                      .....   .......+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+   .+..++...+.......
T Consensus       169 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  242 (342)
T 2qr7_A          169 QLRAE---NGLLMTPCYTANFVAPEVLERQ---GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL  242 (342)
T ss_dssp             ECBCT---TCCBCCSSCCSSCCCHHHHHHH---HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC
T ss_pred             cCcCC---CCceeccCCCccccCHHHhcCC---CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc
Confidence            75432   1223456899999999998743   578899999999999999999999986   35566666665433222


Q ss_pred             --CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccccccCC
Q 006772          275 --CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTDT  333 (632)
Q Consensus       275 --~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~  333 (632)
                        ..+..+++++.+||.+||+.||++||++.++++      ++++  .+|..+....+.++
T Consensus       243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~------hp~~--~~~~~~~~~~~~~~  295 (342)
T 2qr7_A          243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR------HPWI--VHWDQLPQYQLNRQ  295 (342)
T ss_dssp             CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT------SHHH--HTGGGSCCSCCCCC
T ss_pred             CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc------CCee--cCccccccccCCCc
Confidence              133578999999999999999999999999886      4444  23555544444333

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.5e-41  Score=354.43  Aligned_cols=268  Identities=22%  Similarity=0.351  Sum_probs=200.7

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..|..++|++.+.||+|+||.||+|.+..+++   ....||||+++...  ....+.+. ++..++..+ +|+||+.+++
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~-~E~~~l~~l-~h~~iv~~~~   92 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDG---SFVKVAVKMLKADIIASSDIEEFL-REAACMKEF-DHPHVAKLVG   92 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC----------CEEEEEEC------CHHHHHHH-HHHHHHTTC-CCTTBCCCCE
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCC---cceeEEEEEecccccCHHHHHHHH-HHHHHHHHC-CCCceehhhc
Confidence            34667899999999999999999999876542   22379999997542  22333333 333455555 7999999999


Q ss_pred             EEEECCEE------EEEEecCCC-CHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec
Q 006772          116 ISVINGKI------CIAMKFYEG-SVGDRIAQQRG----GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE  184 (632)
Q Consensus       116 ~~~~~~~l------~LVmEy~~G-sL~d~l~~~~~----~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~  184 (632)
                      ++...+..      ++||||+.| +|.+++.....    ..+++..++.++.||+.||+|||+++|+||||||+|||++.
T Consensus        93 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~  172 (323)
T 3qup_A           93 VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE  172 (323)
T ss_dssp             EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcC
Confidence            98876554      999999985 88888765432    25899999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHH
Q 006772          185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI  263 (632)
Q Consensus       185 ~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei  263 (632)
                      ++.+||+|||+++........ .......+|+.|+|||++.+.   .++.++|||||||++|||++ |..||.+.+..++
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  248 (323)
T 3qup_A          173 DMTVCVADFGLSRKIYSGDYY-RQGCASKLPVKWLALESLADN---LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI  248 (323)
T ss_dssp             TSCEEECCCCC------------------CCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             CCCEEEeeccccccccccccc-cccccccCcccccCchhhcCC---CCCCccchhhHHHHHHHHHhCCCCCccccChHHH
Confidence            999999999999765332211 112234568899999998743   68899999999999999999 9999999887777


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ...+.. ...+..+..+++++.++|.+||+.||++||++.++++.|+++...
T Consensus       249 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          249 YNYLIG-GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHhc-CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            766553 445667789999999999999999999999999999999988754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=8.6e-42  Score=358.96  Aligned_cols=254  Identities=24%  Similarity=0.311  Sum_probs=199.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.........+.+.++..++..+ +|+||+.+++++..++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~   78 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGN   78 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCC------cEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCC
Confidence            378999999999999999999988665      489999986544332223333444455554 7999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|+||||++| +|.+++..  ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  156 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             eEEEEEEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence            99999999985 77776643  3579999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhccCCCCCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~~~p~~p~~  279 (632)
                      ... ........+||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+.. ..+...............
T Consensus       157 ~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  233 (323)
T 3tki_A          157 YNN-RERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK  233 (323)
T ss_dssp             ETT-EECCBCSCCSCGGGSCHHHHHCS--SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGG
T ss_pred             cCC-cccccCCCccCcCccCcHHhccC--CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCcccc
Confidence            221 11222346799999999998643  12477899999999999999999999876543 223233222222222357


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++++.+||.+||+.||++||++.|+++
T Consensus       234 ~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          234 IDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            8999999999999999999999999876

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.3e-41  Score=347.95  Aligned_cols=261  Identities=18%  Similarity=0.275  Sum_probs=212.1

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ....|+.++|++.+.||+|+||.||+|.+...       ..||||++....... ..+.+ +..++..+ .|+||+.+++
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vavK~~~~~~~~~-~~~~~-E~~~l~~l-~h~~i~~~~~   86 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSE-DEFIE-EAKVMMNL-SHEKLVQLYG   86 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEETTT-------EEEEEEEECTTSBCH-HHHHH-HHHHHHTC-CCTTBCCEEE
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEcCC-------CeEEEEEecCCCCCH-HHHHH-HHHHHhcC-CCCCEeeEEE
Confidence            44568889999999999999999999987632       379999997654332 33333 33455555 5999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++..|+||||++ |+|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg  165 (283)
T 3gen_A           87 VCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG  165 (283)
T ss_dssp             EECSSSSEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTT
T ss_pred             EEecCCCeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccc
Confidence            9999999999999997 5787777543 3579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++.......  .......+|+.|+|||++.+   ..++.++|+||||+++|||++ |..||...+..+....+.. ...
T Consensus       166 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~  239 (283)
T 3gen_A          166 LSRYVLDDEY--TSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLR  239 (283)
T ss_dssp             GGGGBCCHHH--HSTTSTTSCGGGCCHHHHHH---CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCC
T ss_pred             cccccccccc--ccccCCccCcccCCHHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc-ccC
Confidence            9876532211  11223356889999999874   368899999999999999998 9999999888877766653 445


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ...|..+++.+.++|.+||+.||.+||++.++++.|+.+.
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            5567889999999999999999999999999999988765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.5e-41  Score=344.84  Aligned_cols=253  Identities=26%  Similarity=0.438  Sum_probs=199.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH---HHHHHHHHHHhhhccCCCceeEeeE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA---KVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~---~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .++.++|++.+.||+|+||.||+|.+..        ..||||++........   .+...++..++..+ +|+||+.+++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~   73 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWIG--------DEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRG   73 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEETT--------EEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEcC--------CeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEE
Confidence            3567899999999999999999999752        4799999865432211   12233333444554 6999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeeeeeCCeEEEec-------
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG---LLVLNLKPSNLLLSE-------  184 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~---IvHRDLKP~NILld~-------  184 (632)
                      ++..++..|+||||++| +|.+++.   .+.+++..++.++.|++.||+|||+++   |+||||||+|||++.       
T Consensus        74 ~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~  150 (271)
T 3dtc_A           74 VCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDL  150 (271)
T ss_dssp             EECCC--CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCC
T ss_pred             EEecCCceEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccc
Confidence            99999999999999985 5555542   458999999999999999999999999   999999999999986       


Q ss_pred             -CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHH
Q 006772          185 -HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI  263 (632)
Q Consensus       185 -~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei  263 (632)
                       ++.+||+|||+++.....     ......||+.|+|||++.+   ..++.++|+||||+++|+|++|..||.+.+....
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  222 (271)
T 3dtc_A          151 SNKILKITDFGLAREWHRT-----TKMSAAGAYAWMAPEVIRA---SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV  222 (271)
T ss_dssp             SSCCEEECCCCC------------------CCGGGSCHHHHHH---CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred             cCcceEEccCCcccccccc-----cccCCCCccceeCHHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence             778999999998764321     2224578999999999874   3688999999999999999999999999888777


Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       264 ~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ...+.........+..+++++.++|.+||+.||.+||++.++++.|+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          223 AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            777666666677888999999999999999999999999999998875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-41  Score=355.49  Aligned_cols=249  Identities=19%  Similarity=0.306  Sum_probs=206.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|.+..... . .....++..++..+ +||||+.+++++...+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~-~-~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~   74 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSK------KTYMAKFVKVKGT-D-QVLVKKEISILNIA-RHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCCTH-H-HHHHHHHHHHHHHS-CCTTBCCEEEEEEETT
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCC------cEEEEEEEecCcc-c-HHHHHHHHHHHHhC-CCCCCCeEeEEEecCC
Confidence            368999999999999999999988765      4899999875432 2 22334444555554 7999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec--CCcEEEEecCCcee
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE--HDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~--~g~vkL~DFGlak~  198 (632)
                      .+|+||||++| +|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.  ++.+||+|||+++.
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            99999999985 78877753 3357999999999999999999999999999999999999997  78999999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--C
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--I  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~  276 (632)
                      ....    .......||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..++...+........  .
T Consensus       154 ~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  226 (321)
T 1tki_A          154 LKPG----DNFRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA  226 (321)
T ss_dssp             CCTT----CEEEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             CCCC----CccccccCChhhcCcHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhh
Confidence            5322    223445789999999999743   578899999999999999999999999988888777764332221  1


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+|+++.+||.+||+.||.+|||+.|+++
T Consensus       227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          227 FKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1478999999999999999999999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.4e-41  Score=357.20  Aligned_cols=265  Identities=22%  Similarity=0.329  Sum_probs=213.4

Q ss_pred             CCeEEE-eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~-~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|.+. +.||+|+||.||+|.+..++      +.||||++.....  .....+ .++..++..+.+|+||+.+++++..
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~-~~e~~~l~~l~~~~~iv~~~~~~~~  100 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTG------QEYAAKFLKKRRRGQDCRAEI-LHEIAVLELAKSCPRVINLHEVYEN  100 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEESEETTEECHHHH-HHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCC------CEEEEEEEehhhcchHHHHHH-HHHHHHHHhccCCCCEEEEEEEEEe
Confidence            457777 89999999999999987665      4899999875322  222333 3344566777789999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEecCC
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGDFGI  195 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~DFGl  195 (632)
                      ++.+|+||||+.| +|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.   ++.+||+|||+
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence            9999999999985 7777765544578999999999999999999999999999999999999998   78999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC-
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP-  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p-  274 (632)
                      ++.....    .......||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+....+....... 
T Consensus       181 a~~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  253 (327)
T 3lm5_A          181 SRKIGHA----CELREIMGTPEYLAPEILNY---DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS  253 (327)
T ss_dssp             CEEC-------------CCCGGGCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             ccccCCc----cccccccCCcCccCCeeecC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccC
Confidence            9875332    12234579999999999974   468899999999999999999999999988877766655433222 


Q ss_pred             -CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcccccc
Q 006772          275 -CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGS  327 (632)
Q Consensus       275 -~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~  327 (632)
                       ..+..+++.+.++|.+||+.||++||++.++++      ++++...+|+.+..
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~------h~~~~~~~~~~~~~  301 (327)
T 3lm5_A          254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS------HSWLQQWDFENLFH  301 (327)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT------CGGGCCCCTTCC--
T ss_pred             chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC------CHhhcccccccccC
Confidence             233578999999999999999999999999876      78888888876554

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=7.9e-42  Score=376.03  Aligned_cols=259  Identities=25%  Similarity=0.452  Sum_probs=214.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|..++|++.+.||+|+||+||+|.+...       ..||||+++.... ..+.+.++ ..++..+ +||||+.+++++
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~-------~~vavK~~~~~~~-~~~~~~~E-~~~l~~l-~h~~iv~l~~~~  252 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNKH-------TKVAVKTMKPGSM-SVEAFLAE-ANVMKTL-QHDKLVKLHAVV  252 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETTT-------EEEEEEEECTTSB-CHHHHHHH-HHHHTTC-CCTTBCCEEEEE
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECCc-------cEEEEEEecCCCc-cHHHHHHH-HHHHhhC-CCCCEeeEEEEE
Confidence            457789999999999999999999998542       4799999976443 23444443 3555555 799999999987


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      . ++.+||||||+. |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus       253 ~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a  331 (454)
T 1qcf_A          253 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA  331 (454)
T ss_dssp             C-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred             e-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence            6 677999999997 68998887554457899999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......+|+.|+|||++..   +.++.++|||||||+||||++ |..||.+.+..++...+.. .....
T Consensus       332 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-~~~~~  405 (454)
T 1qcf_A          332 RVIEDNEY--TAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMP  405 (454)
T ss_dssp             GGBCCHHH--HTTCSSSSCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-TCCCC
T ss_pred             eEcCCCce--eccCCCcccccccCHHHhcc---CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCC
Confidence            76532111  11122346789999999863   468999999999999999999 9999999988887776653 44556


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .|..+|+++.+||.+||+.||++||++.+|++.|+.+.
T Consensus       406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            68899999999999999999999999999999998764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.8e-41  Score=355.30  Aligned_cols=270  Identities=20%  Similarity=0.302  Sum_probs=217.2

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeE
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~  112 (632)
                      +...-|.++.++|++.+.||+|+||.||+|.+..++.    ...||+|.+...........+.++..++.++.+||||+.
T Consensus        15 ~~~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   90 (327)
T 1fvr_A           15 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGL----RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN   90 (327)
T ss_dssp             -CCCSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTE----EEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCC
T ss_pred             CCcccccccHHHccceeeeecCCCceEEEEEEccCCc----ccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhh
Confidence            3445577888999999999999999999999876542    114599998754333223334444566777778999999


Q ss_pred             eeEEEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeC
Q 006772          113 LHGISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKP  177 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP  177 (632)
                      +++++..++.+|+||||++ |+|.+++....              ...+++..++.++.||+.||+|||+++|+||||||
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp  170 (327)
T 1fvr_A           91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA  170 (327)
T ss_dssp             EEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             hceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCcc
Confidence            9999999999999999997 58888886532              24799999999999999999999999999999999


Q ss_pred             CeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCC
Q 006772          178 SNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF  256 (632)
Q Consensus       178 ~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~  256 (632)
                      +|||++.++.+||+|||+++.....    .......+|+.|+|||++.+.   .++.++|+|||||++|||++ |..||.
T Consensus       171 ~NIl~~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~pf~  243 (327)
T 1fvr_A          171 RNILVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYC  243 (327)
T ss_dssp             GGEEECGGGCEEECCTTCEESSCEE----CCC----CCTTTCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ceEEEcCCCeEEEcccCcCcccccc----ccccCCCCCccccChhhhccc---cCCchhcchHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999998743211    112233568899999998643   57889999999999999998 999999


Q ss_pred             CCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       257 ~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +.+..++...+. ....+..+..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          244 GMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             TCCHHHHHHHGG-GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHhh-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            988877766554 334556678899999999999999999999999999999887764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.1e-41  Score=357.55  Aligned_cols=258  Identities=21%  Similarity=0.324  Sum_probs=201.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.............++..++..+ +|+||+.+++++..++.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTD------NLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCC------cEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCE
Confidence            68999999999999999999987665      489999986543221111111233444554 69999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      .||||||++|+|.+++... +..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....
T Consensus        75 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           75 LTLVFEYLDKDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             EEEEEECCSEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             EEEEecccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            9999999999999888754 457999999999999999999999999999999999999999999999999998754321


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-------  275 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-------  275 (632)
                         ........||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+......+.       
T Consensus       154 ---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  228 (324)
T 3mtl_A          154 ---TKTYDNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI  228 (324)
T ss_dssp             ------------CGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred             ---ccccccccCcccccChhhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhh
Confidence               1222345789999999998642  3578999999999999999999999999887776665543222111       


Q ss_pred             ---------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          276 ---------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       276 ---------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                                           .+..+++++.+||.+||+.||++|||+.|+++      ++++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~  287 (324)
T 3mtl_A          229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK------HPFFLS  287 (324)
T ss_dssp             GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT------SGGGGG
T ss_pred             hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc------Chhhhh
Confidence                                 11357889999999999999999999999886      666643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3e-41  Score=347.50  Aligned_cols=268  Identities=24%  Similarity=0.378  Sum_probs=195.5

Q ss_pred             CCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCc
Q 006772           32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQS  109 (632)
Q Consensus        32 ~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~  109 (632)
                      .+......|..++|++.++||+|+||.||+|.+..         .||+|+++....  ...+.+ .++..++..+ +|+|
T Consensus        13 ~~~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---------~vavK~~~~~~~~~~~~~~~-~~E~~~l~~l-~h~~   81 (289)
T 3og7_A           13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKT-RHVN   81 (289)
T ss_dssp             -----CCBCCTTSCEEEEEEEECSSEEEEEEESSS---------EEEEEEESCSSCCHHHHHHH-HHHHHHHTTC-CCTT
T ss_pred             CCCCCCCccCccceeeeeEecCCCCeEEEEEEEcC---------ceEEEEEeccCCCHHHHHHH-HHHHHHHHhC-CCCc
Confidence            34455667888999999999999999999997542         599999975432  222333 3333445554 6999


Q ss_pred             eeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          110 VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       110 I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                      |+.+++++ ..+..++||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus        82 iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~  159 (289)
T 3og7_A           82 ILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV  159 (289)
T ss_dssp             BCCEEEEE-CSSSCEEEEECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEEEeec-cCCccEEEEEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCE
Confidence            99998854 5567899999998 577776643 34679999999999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH-HHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-IYHSV  267 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e-i~~~i  267 (632)
                      ||+|||+++...... .........||+.|+|||++.......++.++|||||||++|||++|..||.+....+ +...+
T Consensus       160 kl~Dfg~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  238 (289)
T 3og7_A          160 KIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV  238 (289)
T ss_dssp             EECCCC-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH
T ss_pred             EEccceecccccccc-ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh
Confidence            999999987543211 1122334578999999999874434578899999999999999999999998865444 33333


Q ss_pred             HhhccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          268 VIKKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       268 ~~~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ......+.   .+..+|+++.++|.+||+.||.+||++.++++.|+.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            32222222   34578999999999999999999999999999998764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.9e-41  Score=371.33  Aligned_cols=256  Identities=23%  Similarity=0.385  Sum_probs=213.3

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...|+.++|++.+.||+|+||+||+|.+..        +.||||+++...  ..+.+.++ ..++.++ +|+||+.++++
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~--------~~vavK~~~~~~--~~~~~~~E-~~~l~~l-~h~niv~~~~~  254 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCIKNDA--TAQAFLAE-ASVMTQL-RHSNLVQLLGV  254 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEETT--------EEEEEEEESSCT--TSHHHHHH-HHHHHTC-CCTTBCCEEEE
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEecC--------CeEEEEEeCCch--HHHHHHHH-HHHHHhc-cCCCEEEEEEE
Confidence            345788999999999999999999998752        479999997643  22344443 3455555 79999999999


Q ss_pred             EEECC-EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          117 SVING-KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       117 ~~~~~-~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      +...+ .+||||||++ |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       255 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG  334 (450)
T 1k9a_A          255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG  334 (450)
T ss_dssp             EECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCC
Confidence            87664 7999999998 589998877654558999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++.....      .....+|+.|+|||++.+   ..++.++|||||||+||||++ |..||.+.+..++...+. ...+
T Consensus       335 ~a~~~~~~------~~~~~~~~~y~aPE~~~~---~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~  404 (450)
T 1k9a_A          335 LTKEASST------QDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYK  404 (450)
T ss_dssp             TCEECC------------CCCTTTSCHHHHHS---SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-TTCC
T ss_pred             Cccccccc------ccCCCCCcceeCHHHhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCC
Confidence            99854221      122356889999999974   468999999999999999998 999999887777666654 3456


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +..|..+|+++.++|.+||+.||++||++.++++.|+.+..
T Consensus       405 ~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          405 MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            67789999999999999999999999999999999988764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.4e-41  Score=348.27  Aligned_cols=264  Identities=22%  Similarity=0.395  Sum_probs=219.5

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ....+..++|++.+.||+|+||.||+|.+..++      ..||+|++..... ..+.+.+ +..++..+ +|+||+.+++
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~-~~~~~~~-E~~~l~~l-~h~~i~~~~~   76 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTM-EVEEFLK-EAAVMKEI-KHPNLVQLLG   76 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGT------EEEEEEEECSCST-HHHHHHH-HHHHHHHC-CCTTBCCEEE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCC------EEEEEEecCcCHH-HHHHHHH-HHHHHHhC-CCCCEeeEEE
Confidence            345577899999999999999999999987655      4899999975433 2333333 33455555 6999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++..|+||||++ |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        77 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg  156 (288)
T 3kfa_A           77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG  156 (288)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCc
Confidence            9999999999999998 688888877656679999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      ++.......  ........+|+.|+|||++.+   ..++.++|+||||+++|+|++ |..||.+.+..+....+. ....
T Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~-~~~~  230 (288)
T 3kfa_A          157 LSRLMTGDT--YTAHAGAKFPIKWTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR  230 (288)
T ss_dssp             GGGTSCSSS--SEEETTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCC
T ss_pred             cceeccCCc--cccccCCccccCcCChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-ccCC
Confidence            987653321  112233457889999999864   368899999999999999999 999999888776665544 3455


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +..+..+|+++.+++.+||+.||.+||++.++++.|+.+..
T Consensus       231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            66778999999999999999999999999999998887654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-42  Score=366.00  Aligned_cols=249  Identities=22%  Similarity=0.336  Sum_probs=203.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.+....  .....+.++..++..+ +||||+.+++++..
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~   80 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQ------QKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITT   80 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEe
Confidence            468999999999999999999997765      48999998642111  1111233333444444 69999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ++.+|+||||+.|+|.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...
T Consensus        81 ~~~~~lv~E~~~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           81 PTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             SSEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             CCEEEEEEECCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            9999999999999999998764  47999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ...    ......+||+.|+|||++.+..  ..+.++|||||||++|+|++|..||.+....+....+  ......+|..
T Consensus       159 ~~~----~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~  230 (336)
T 3h4j_B          159 TDG----NFLKTSCGSPNYAAPEVINGKL--YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDF  230 (336)
T ss_dssp             TTS----BTTCCCTTSTTTSCGGGSCCSG--GGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--CSSCCCCCTT
T ss_pred             cCC----cccccccCCcCcCCHHHHcCCC--CCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--HcCCCCCccc
Confidence            322    2234467999999999997542  1367999999999999999999999886554433222  1234556788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++++.+||.+||+.||.+|||+.|+++
T Consensus       231 ~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          231 LSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            9999999999999999999999999886

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.5e-41  Score=343.67  Aligned_cols=250  Identities=22%  Similarity=0.362  Sum_probs=206.1

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+..++|++.+.||+|+||.||+|.+..++      ..||+|++.+.....  ......++..++..+ .|+||+.++++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   77 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGY   77 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCC------cEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhhe
Confidence            346689999999999999999999988765      489999986432111  122233344455554 58999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +...+..++||||++ |+|.+.+...  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        78 ~~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~  155 (279)
T 3fdn_A           78 FHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW  155 (279)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCE
T ss_pred             EecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccc
Confidence            999999999999998 5777777654  4799999999999999999999999999999999999999999999999998


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.....     .......||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.+.+..+....+.  .....
T Consensus       156 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~  225 (279)
T 3fdn_A          156 SVHAPS-----SRRTDLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFT  225 (279)
T ss_dssp             ESCC-------------CCCCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCC
T ss_pred             cccCCc-----ccccccCCCCCccCHhHhccC---CCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH--hCCCC
Confidence            854322     122345789999999998743   67889999999999999999999999988887776655  34556


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|..+++++.+||.+||+.||.+||++.|+++
T Consensus       226 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            78889999999999999999999999999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.2e-41  Score=353.92  Aligned_cols=258  Identities=19%  Similarity=0.309  Sum_probs=210.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++......      ....+ .++..++..+ +||||+.++++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~~-~~E~~~l~~l-~hp~iv~~~~~   82 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTG------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILKEI-QHPNVITLHEV   82 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTC------CEEEEEEEEBCCSTTCSSSBCHHHH-HHHHHHHHHC-CCTTBCCEEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCC------cEEEEEEEEccccccccchhhHHHH-HHHHHHHHhC-CCCCCCcEEEE
Confidence            57999999999999999999987665      48999999754321      12333 3344555555 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC----cEEEE
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLG  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g----~vkL~  191 (632)
                      +..++.+|+||||++ |+|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++    .+||+
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~  160 (326)
T 2y0a_A           83 YENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII  160 (326)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred             EEeCCEEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence            999999999999997 588887753  35799999999999999999999999999999999999999888    89999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++.....    .......||+.|+|||++.+   ..++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus       161 Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~  233 (326)
T 2y0a_A          161 DFGLAHKIDFG----NEFKNIFGTPEFVAPEIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  233 (326)
T ss_dssp             CCTTCEECCTT----SCCCCCCSCTTTCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTC
T ss_pred             ECCCCeECCCC----CccccccCCcCcCCceeecC---CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcC
Confidence            99999875322    12234579999999999864   368899999999999999999999999988877776665332


Q ss_pred             cCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          272 EKPC--IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       272 ~~p~--~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      ....  .+..+++.+.+||.+||+.||++||++.++++      ++++...+|.
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~~~~~~  281 (326)
T 2y0a_A          234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ------HPWIKPKDTQ  281 (326)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH------STTTSCCSHH
T ss_pred             CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc------CCCccCCcch
Confidence            2211  12578999999999999999999999999887      6666655543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.7e-41  Score=369.32  Aligned_cols=272  Identities=18%  Similarity=0.259  Sum_probs=195.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      +.-.++|++.+.||+|+||.||+|.++.++      +.||||++.+...  ...+.+. ++..++..+ +|+||+.++++
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~~~-~E~~~l~~l-~h~niv~l~~~  120 (458)
T 3rp9_A           49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEK------RVVAIKKILRVFEDLIDCKRIL-REIAILNRL-NHDHVVKVLDI  120 (458)
T ss_dssp             CCSCTTEEECCC-------CEEEEEECC--------CEEEEEEECSTTSSHHHHHHHH-HHHHHHHHC-CCTTBCCEEEE
T ss_pred             CccCCCeEEeeEeeecCCeEEEEEEECCCC------cEEEEEEechhhcCHHHHHHHH-HHHHHHHhC-CCCCCCceEEE
Confidence            334588999999999999999999988765      4899999965322  2223333 344555555 79999999999


Q ss_pred             EEEC-----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          117 SVIN-----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       117 ~~~~-----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +...     +.+||||||+.|+|.+++..  ...+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+
T Consensus       121 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~  198 (458)
T 3rp9_A          121 VIPKDVEKFDELYVVLEIADSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVC  198 (458)
T ss_dssp             CCCSCTTTCCCEEEEECCCSEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEEC
T ss_pred             EecCCcccCceEEEEEeccccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeec
Confidence            8543     57999999999999888854  3579999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCC------------------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHH
Q 006772          192 DFGIPYLLLGRSLS------------------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME  247 (632)
Q Consensus       192 DFGlak~~~~~~~~------------------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~E  247 (632)
                      |||+++........                        .......+||+.|+|||++..  ...++.++|||||||+|||
T Consensus       199 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~DiwSlG~il~e  276 (458)
T 3rp9_A          199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL--QENYTEAIDVWSIGCIFAE  276 (458)
T ss_dssp             CCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT--CCCCCTHHHHHHHHHHHHH
T ss_pred             ccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC--CCCCCcHhHHHHHHHHHHH
Confidence            99999875322110                        012344678999999998743  2368999999999999999


Q ss_pred             HHh-----------CCCCCCCCCH--------------------HHHHHHHHhhccCC----------------------
Q 006772          248 MLT-----------GIQPWFGKSV--------------------EEIYHSVVIKKEKP----------------------  274 (632)
Q Consensus       248 mlt-----------G~~PF~~~~~--------------------~ei~~~i~~~~~~p----------------------  274 (632)
                      |++           |.++|.+.+.                    .+.+..+......+                      
T Consensus       277 lltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  356 (458)
T 3rp9_A          277 LLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPK  356 (458)
T ss_dssp             HHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCC
T ss_pred             HHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCC
Confidence            998           7777776541                    11111111000000                      


Q ss_pred             -------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccc
Q 006772          275 -------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSR  328 (632)
Q Consensus       275 -------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~  328 (632)
                             ...+.+++++.+||.+||+.||++|||++|+++      ++++....|......
T Consensus       357 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~------Hp~f~~~~~~~~e~~  411 (458)
T 3rp9_A          357 REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA------HPFFKEVRIAEVETN  411 (458)
T ss_dssp             CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGTTTCCGGGCCC
T ss_pred             CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc------CHhhhhcCCCccCCC
Confidence                   012456899999999999999999999999887      888888888765543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=5.3e-41  Score=369.37  Aligned_cols=250  Identities=20%  Similarity=0.329  Sum_probs=206.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++...... .....+.++..++..+ +||||+.+++++..++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~------~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~   83 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAG------QEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEG   83 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTT------EEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSS
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCC------cEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECC
Confidence            67999999999999999999988765      48999999764422 2222334444555555 7999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe---cCCcEEEEecCCce
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS---EHDQLVLGDFGIPY  197 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld---~~g~vkL~DFGlak  197 (632)
                      ..|+||||+. |+|.+.+...  +.+++.++..++.||+.||+|||+++|+||||||+|||++   .++.+||+|||+++
T Consensus        84 ~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           84 HHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             EEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            9999999998 5888888653  5799999999999999999999999999999999999998   46789999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .....   .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+++..+.........+
T Consensus       162 ~~~~~---~~~~~~~~gt~~Y~APE~l~~~---~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  235 (444)
T 3soa_A          162 EVEGE---QQAWFGFAGTPGYLSPEVLRKD---PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP  235 (444)
T ss_dssp             CCCTT---CCBCCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             EecCC---CceeecccCCcccCCHHHhcCC---CCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcc
Confidence            65332   1223446799999999999743   68899999999999999999999999999888888776544333222


Q ss_pred             --CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 --SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 --~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                        ..+++++.+||.+||+.||.+||++.|+++
T Consensus       236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          236 EWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              478999999999999999999999999887

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.6e-41  Score=354.25  Aligned_cols=265  Identities=19%  Similarity=0.263  Sum_probs=193.4

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+...+|++.+.||+|+||.||+|.+..++      +.||||++..........+.+ +..++.++..|+||+.+++++.
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~-e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSG------REYALKRLLSNEEEKNRAIIQ-EVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETTTC------CEEEEEEEEESSHHHHHHHHH-HHHHHHHHTTSTTBCCEEEEEE
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECCCC------cEEEEEEecCCchHHHHHHHH-HHHHHHHhccCCChhhcccccc
Confidence            345568999999999999999999987665      489999986655444444433 3455667777999999999985


Q ss_pred             E--------CCEEEEEEecCCCCHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEecCCc
Q 006772          119 I--------NGKICIAMKFYEGSVGDRIAQQ-RGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLSEHDQ  187 (632)
Q Consensus       119 ~--------~~~l~LVmEy~~GsL~d~l~~~-~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld~~g~  187 (632)
                      .        ...++++|||+.|+|.+++... ..+.+++.+++.++.||+.||+|||+++  |+||||||+|||++.++.
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSC
T ss_pred             ccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCC
Confidence            3        3458999999999999988764 3467999999999999999999999999  999999999999999999


Q ss_pred             EEEEecCCceeccCCCCCC---------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC
Q 006772          188 LVLGDFGIPYLLLGRSLSD---------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK  258 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~---------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~  258 (632)
                      +||+|||+++.........         .......||+.|+|||++.......++.++|||||||++|||++|..||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            9999999998653321110         0112446899999999985333456889999999999999999999999876


Q ss_pred             CHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ....+.    ........+..++..+.+||.+||+.||.+||++.++++.|+.+..
T Consensus       257 ~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          257 AKLRIV----NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             -------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHhh----cCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            544332    2223334456788899999999999999999999999999987764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=4.2e-41  Score=344.28  Aligned_cols=265  Identities=21%  Similarity=0.349  Sum_probs=210.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|.+....   .....||+|.+...........+.++..++..+ +||||+.+++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   82 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHK---GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGII   82 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTT---CCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEE
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCC---CCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEE
Confidence            4567789999999999999999999876543   223579999997653333233333444555555 699999999987


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .. +..|+||||++ |+|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        83 ~~-~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  160 (281)
T 3cc6_A           83 EE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS  160 (281)
T ss_dssp             CS-SSCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred             cC-CCCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCC
Confidence            54 56789999998 5777777653 457999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......+|+.|+|||++.+   ..++.++|+|||||++|||++ |..||...+..+....+. ....+.
T Consensus       161 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-~~~~~~  234 (281)
T 3cc6_A          161 RYIEDEDY--YKASVTRLPIKWMSPESINF---RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLP  234 (281)
T ss_dssp             GCC-----------CCCCCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-HTCCCC
T ss_pred             cccccccc--cccccCCCCcceeCchhhcc---CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-cCCCCC
Confidence            76533211  11223457889999999863   368899999999999999998 999998877666555444 344556


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+..+++.+.++|.+||+.||++||++.++++.|+.+..
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999987653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.7e-41  Score=355.41  Aligned_cols=257  Identities=19%  Similarity=0.295  Sum_probs=201.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccC-CCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRE-SQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~-h~~I~~l~~~~  117 (632)
                      +..++|++.+.||+|+||.||+|.+.. +      +.||||++...... .....+.++..++..+.+ |+||+.+++++
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   78 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNEK-K------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   78 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECTT-S------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeCC-C------CEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE
Confidence            456789999999999999999998743 2      48999998754322 222223344455666654 49999999999


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..++.+|||||+..|+|.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||+++
T Consensus        79 ~~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~  155 (343)
T 3dbq_A           79 ITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIAN  155 (343)
T ss_dssp             ECSSEEEEEECCCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred             eeCCEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeeccccc
Confidence            999999999998889999988753  5799999999999999999999999999999999999997 6889999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCC--------CCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHH
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPE--------VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVV  268 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~  268 (632)
                      ...... ........+||+.|+|||++.+.        ....++.++|||||||++|||++|..||.... .......+.
T Consensus       156 ~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  234 (343)
T 3dbq_A          156 QMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII  234 (343)
T ss_dssp             CC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred             ccCccc-ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh
Confidence            653321 11122345799999999998531        12468899999999999999999999998754 334444555


Q ss_pred             hhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .......+|...+.++.+||.+||+.||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            445566778888999999999999999999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=346.05  Aligned_cols=263  Identities=19%  Similarity=0.321  Sum_probs=201.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++...... .......++..++..+ +|+||+.+++++..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   75 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTG------QIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKR   75 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCC------cEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCC
Confidence            68999999999999999999987665      48999998654332 2223333344555555 6999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..++||||++|+++..+... .+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eEEEEEEeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            99999999997666555443 35799999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc---------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE---------  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~---------  272 (632)
                      ..   .......||+.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+.+..+....+.....         
T Consensus       155 ~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (311)
T 4agu_A          155 PS---DYYDDEVATRWYRSPELLVGD--TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV  229 (311)
T ss_dssp             --------------GGGCCHHHHHTC--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             cc---cccCCCcCCccccChHHHhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccc
Confidence            21   122345789999999998642  3578999999999999999999999999887665444332110         


Q ss_pred             ----------CCCCC----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          273 ----------KPCIP----------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       273 ----------~p~~p----------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                                ....+          ..+++++.+||.+||+.||.+|||+.++++      ++++.+..+..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~~~~~  295 (311)
T 4agu_A          230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH------HPYFENIREIE  295 (311)
T ss_dssp             HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT------SGGGTTCC---
T ss_pred             cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc------ChHHHhccCHH
Confidence                      00001          367889999999999999999999999886      67776655443

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.7e-41  Score=377.79  Aligned_cols=262  Identities=23%  Similarity=0.417  Sum_probs=218.8

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...|..++|++.+.||+|+||.||+|.++.++      ..||||+++..... .+.+.++ ..++..+ +|+||+.++++
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~------~~vavK~~~~~~~~-~~~~~~E-~~~l~~l-~hpniv~l~~~  284 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTME-VEEFLKE-AAVMKEI-KHPNLVQLLGV  284 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGT------EEEEEEECCSSSSC-HHHHHHH-HHHHHHC-CCTTBCCEEEE
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCC------eEEEEEEecCcccc-hHHHHHH-HHHHHhc-CCCCEeeEEEE
Confidence            34567789999999999999999999987654      48999999764332 3444443 3455555 79999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++.+||||||+. |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       285 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  364 (495)
T 1opk_A          285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL  364 (495)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             EecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeeccc
Confidence            999999999999998 7899988765556799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++.......  .......+|+.|+|||++..   +.++.++|||||||+||||++ |..||.+.+..++...+. ...+.
T Consensus       365 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~  438 (495)
T 1opk_A          365 SRLMTGDTY--TAHAGAKFPIKWTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRM  438 (495)
T ss_dssp             EECCTTCCE--ECCTTCCCCGGGCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCC
T ss_pred             ceeccCCce--eecCCCcCCcceeCHhHHhc---CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            987543211  11223356789999999864   468899999999999999999 999999988777665544 44556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..|..+|+++.+||.+||+.||++||++.+|++.|+.+.
T Consensus       439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            678899999999999999999999999999999998654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.9e-41  Score=355.34  Aligned_cols=263  Identities=21%  Similarity=0.290  Sum_probs=203.1

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...++.++|++.+.||+|+||.||+|++..        +.||||++....... .. ...+..++..+ +||||+.++++
T Consensus        18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~vavK~~~~~~~~~-~~-~~~E~~~l~~l-~hpniv~~~~~   86 (322)
T 3soc_A           18 NLYFQSMPLQLLEVKARGRFGCVWKAQLLN--------EYVAVKIFPIQDKQS-WQ-NEYEVYSLPGM-KHENILQFIGA   86 (322)
T ss_dssp             CEEETTEEEEEEEEEECSTTCEEEEEEETT--------EEEEEEEECGGGHHH-HH-HHHHHHTSTTC-CCTTBCCEEEE
T ss_pred             ccccchhhchhhheecccCceEEEEEEECC--------CEEEEEEeecCchHH-HH-HHHHHHHHhcC-CCCCchhhcce
Confidence            445788999999999999999999998752        489999996533221 11 12222334444 69999999999


Q ss_pred             EEEC----CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC----------CceeeeeeCCeEE
Q 006772          117 SVIN----GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI----------GLLVLNLKPSNLL  181 (632)
Q Consensus       117 ~~~~----~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~----------~IvHRDLKP~NIL  181 (632)
                      +...    ..+|+||||++ |+|.+++..   ..+++..++.++.|++.||+|||++          +|+||||||+|||
T Consensus        87 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nil  163 (322)
T 3soc_A           87 EKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL  163 (322)
T ss_dssp             EEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEE
T ss_pred             eccCCCCCceEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEE
Confidence            8874    34799999998 588888754   3699999999999999999999999          9999999999999


Q ss_pred             EecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCC--CCCCcccccchhHHHHHHHHhCCCCCCCC-
Q 006772          182 LSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVR--GPISFETDTWGFGCSIMEMLTGIQPWFGK-  258 (632)
Q Consensus       182 ld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~--g~~t~ksDvwSlGvvL~EmltG~~PF~~~-  258 (632)
                      ++.++.+||+|||+++....... ........||+.|+|||++.+...  ..++.++|||||||++|||++|+.||.+. 
T Consensus       164 l~~~~~~kL~DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~  242 (322)
T 3soc_A          164 LKNNLTACIADFGLALKFEAGKS-AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV  242 (322)
T ss_dssp             ECTTCCEEECCCTTCEEECTTSC-CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred             ECCCCeEEEccCCcccccccccC-ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence            99999999999999987643321 122334679999999999875311  24567899999999999999999999763 


Q ss_pred             ---------------CHHHHHHHHHhhccCCCCCCC-----CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          259 ---------------SVEEIYHSVVIKKEKPCIPSG-----LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       259 ---------------~~~ei~~~i~~~~~~p~~p~~-----lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                                     ...++...+......+..+..     .++++.+||.+||+.||++|||+.++++.|+.+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          243 DEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                           223333333333333433332     34569999999999999999999999999988764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1e-40  Score=365.01  Aligned_cols=249  Identities=20%  Similarity=0.318  Sum_probs=203.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhc-----cCCCceeEeeEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF-----RESQSVCWLHGI  116 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l-----~~h~~I~~l~~~  116 (632)
                      ..+|++.+.||+|+||.||+|.+..++      +.||||++...... ...+.+ +..++..+     ..|+||+.+++.
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~------~~vAvK~~~~~~~~-~~~~~~-E~~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVH------QHVALKMVRNEKRF-HRQAAE-EIRILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTT------EEEEEEEECSCHHH-HHHHHH-HHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCC------cEEEEEEECCccch-HHHHHH-HHHHHHHHhhccccCCcCEEEEEee
Confidence            467999999999999999999988765      48999999754321 122222 22333333     267899999999


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc--EEEEecC
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ--LVLGDFG  194 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~--vkL~DFG  194 (632)
                      +...+.+|+||||+.|+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.  +||+|||
T Consensus       168 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG  247 (429)
T 3kvw_A          168 FTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG  247 (429)
T ss_dssp             EEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred             cccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecc
Confidence            99999999999999999999998776667999999999999999999999999999999999999999987  9999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++....      .....+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+....+......+
T Consensus       248 ~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p  318 (429)
T 3kvw_A          248 SSCYEHQ------RVYTYIQSRFYRAPEVILGA---RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP  318 (429)
T ss_dssp             TCEETTC------CCCSSCSCGGGCCHHHHHTB---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             cceecCC------cccccCCCCCccChHHHhCC---CCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence            9976422      23346789999999999744   68899999999999999999999999988776655544221111


Q ss_pred             C---------------------------------------------------------CCCCCCHHHHHHHHHhhhcCcC
Q 006772          275 C---------------------------------------------------------IPSGLPPAVENVIIGCFEYDLR  297 (632)
Q Consensus       275 ~---------------------------------------------------------~p~~lp~~l~~LI~~cL~~DP~  297 (632)
                      .                                                         ++...++++.+||.+||+.||+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~  398 (429)
T 3kvw_A          319 SQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA  398 (429)
T ss_dssp             CHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTT
T ss_pred             CHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChh
Confidence            0                                                         1123478899999999999999


Q ss_pred             CCCCHHHHHH
Q 006772          298 NRPLMADILH  307 (632)
Q Consensus       298 ~RPs~~ell~  307 (632)
                      +|||+.|+++
T Consensus       399 ~Rpta~e~L~  408 (429)
T 3kvw_A          399 VRMTPGQALR  408 (429)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCCCHHHHhC
Confidence            9999999886

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.6e-41  Score=352.94  Aligned_cols=271  Identities=21%  Similarity=0.294  Sum_probs=213.4

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ....++.++|++.+.||+|+||.||+|++...+.  ..++.||||++........+.+.+ +..++..+ +|+||+.+++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~-E~~~l~~l-~h~~i~~~~~   91 (327)
T 3lxl_A           16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGD--NTGALVAVKQLQHSGPDQQRDFQR-EIQILKAL-HSDFIVKYRG   91 (327)
T ss_dssp             -CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSS--SCSEEEEEEEESSCCHHHHHHHHH-HHHHHHTC-CCTTBCCEEE
T ss_pred             hhhhhchhhhhhhhhccCCCCeEEEEEEeccCCC--CcceEEEEEEeccCCHHHHHHHHH-HHHHHHhc-CCCceeEEEE
Confidence            3455778999999999999999999999643221  334689999998765544444444 34555555 7999999999


Q ss_pred             EEE--ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          116 ISV--INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       116 ~~~--~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++.  ..+.+|+||||++ |+|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~D  170 (327)
T 3lxl_A           92 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIAD  170 (327)
T ss_dssp             EEECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             EEecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcc
Confidence            887  4567999999996 67888776543 4699999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-----------
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-----------  261 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-----------  261 (632)
                      ||+++................||+.|+|||++.+.   .++.++|||||||++|+|++|..||......           
T Consensus       171 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~  247 (327)
T 3lxl_A          171 FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN---IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV  247 (327)
T ss_dssp             GGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----C
T ss_pred             cccceecccCCccceeeccCCccccccCHHHhccC---CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccccc
Confidence            99998764332211222334688899999998743   5788999999999999999999998654322           


Q ss_pred             ---HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          262 ---EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       262 ---ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                         ............+..+..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          248 PALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             CHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             ccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence               11222233445566788999999999999999999999999999999987653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.6e-41  Score=341.00  Aligned_cols=260  Identities=21%  Similarity=0.378  Sum_probs=214.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.+.||+|+||.||+|.+...       +.||+|++...... .+.+.+ +..++..+ +|+||+.+++++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vaiK~~~~~~~~-~~~~~~-e~~~l~~l-~h~~i~~~~~~~   72 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNK-------DKVAIKTIREGAMS-EEDFIE-EAEVMMKL-SHPKLVQLYGVC   72 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETTT-------EEEEEEEECTTTBC-HHHHHH-HHHHHHTC-CCTTBCCEEEEE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecCC-------CeEEEEEccccCCC-HHHHHH-HHHHHHhC-CCCCEeeEEEEE
Confidence            357889999999999999999999998632       37999999765432 233333 33455555 699999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..++..++||||++ |+|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~  151 (267)
T 3t9t_A           73 LEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT  151 (267)
T ss_dssp             CSSSSCEEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred             ccCCCeEEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccc
Confidence            99999999999998 5777777543 457999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......||+.|+|||++.+   ..++.++|+||||+++|||++ |..||.+.+..+....+.. ...+.
T Consensus       152 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~-~~~~~  225 (267)
T 3t9t_A          152 RFVLDDQY--TSSTGTKFPVKWASPEVFSF---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLY  225 (267)
T ss_dssp             GGBCCHHH--HSTTSTTCCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCC
T ss_pred             cccccccc--cccccccccccccChhhhcC---CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc-CCcCC
Confidence            76432110  11123457889999999864   368899999999999999999 9999999888877766653 34455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .|..+++++.+++.+||+.||++||++.++++.|+.+..
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            677899999999999999999999999999999987653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.9e-41  Score=358.70  Aligned_cols=249  Identities=21%  Similarity=0.323  Sum_probs=205.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||+|++..... ......+.++..++..+ +||||+.+++++..++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~  101 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEES  101 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCC------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCC
Confidence            57999999999999999999987665      4899999975432 11222233444555555 6999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cEEEEecCCce
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPY  197 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~vkL~DFGlak  197 (632)
                      ..|+||||+.| +|.+.+..  ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++   .+||+|||+++
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          102 FHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             EEEEEECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            99999999984 78787754  35799999999999999999999999999999999999998654   59999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .....    ......+||+.|+|||++.+   ..++.++|||||||++|+|++|..||.+.+..+++..+.........+
T Consensus       180 ~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  252 (362)
T 2bdw_A          180 EVNDS----EAWHGFAGTPGYLSPEVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP  252 (362)
T ss_dssp             CCTTC----CSCCCSCSCTTTCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             EecCC----cccccCCCCccccCHHHHcc---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence            65322    22334679999999999974   368899999999999999999999999998888877776543332222


Q ss_pred             --CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 --SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 --~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                        ..+++++.+||.+||+.||++||++.++++
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              468999999999999999999999999885

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.7e-41  Score=353.05  Aligned_cols=266  Identities=21%  Similarity=0.333  Sum_probs=208.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ..+..++|++.+.||+|+||.||+|.+..+++.  ....||+|.+...... ....+. ++..++..+ +||||+.++++
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--~~~kv~iK~~~~~~~~~~~~~~~-~E~~~l~~l-~hp~iv~~~~~   85 (327)
T 3lzb_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEIL-DEAYVMASV-DNPHVCRLLGI   85 (327)
T ss_dssp             EECCTTTEEEEEEEEECSSEEEEEEEECCTTCS--CCEEEEEEEECCCSSCCCHHHHH-HHHHHHTTC-CBTTBCCCCEE
T ss_pred             cccCHhHceEEEEeeeCCCeEEEEEEEcCCCce--EEEEEEEEeeccccCHHHHHHHH-HHHHHHHhC-CCCCeeEEEEE
Confidence            346678999999999999999999998876541  1235788888654322 233333 344455555 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++ .+++|+|+. |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~-~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~  163 (327)
T 3lzb_A           86 CLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             EESSS-EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred             EecCC-ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence            88765 778888887 6888887654 45799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++....... ........||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+..++...+. .....
T Consensus       164 a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~  238 (327)
T 3lzb_A          164 AKLLGAEEK-EYHAEGGKVPIKWMALESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERL  238 (327)
T ss_dssp             -----------------CCCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCC
T ss_pred             eeEccCccc-cccccCCCccccccCHHHHcC---CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            986533211 112223456889999999974   368899999999999999999 999999988777665544 44556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       239 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          239 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            6788899999999999999999999999999999988764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=8.9e-41  Score=356.13  Aligned_cols=259  Identities=19%  Similarity=0.246  Sum_probs=206.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+...........++..++..+ .|+||+.+++++...  
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNK------VRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTI   99 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSST
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCC------eEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCc
Confidence            68999999999999999999987665      489999997644333323333444555555 699999999998654  


Q ss_pred             ---CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          121 ---GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       121 ---~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                         ...|+||||++|+|.+++..   +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       100 ~~~~~~~iv~e~~~~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          100 EQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             TTCCCEEEEEECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cccceEEEEEcccCcCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence               47899999999999888854   369999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---  274 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---  274 (632)
                      ...............+||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+......+   
T Consensus       177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  254 (364)
T 3qyz_A          177 VADPDHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE  254 (364)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCHHHHHTB--CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred             ecCCCCCccccccccccccCCCCCHHhcCC--CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            764332222223456899999999987532  357899999999999999999999999887655544443211111   


Q ss_pred             ---------------------C-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          275 ---------------------C-----IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       275 ---------------------~-----~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                                           .     +...+++++.+||.+||+.||++||++.++++      ++++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~~  319 (364)
T 3qyz_A          255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA------HPYLEQ  319 (364)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT------SGGGTT
T ss_pred             HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc------Ccchhh
Confidence                                 0     12467899999999999999999999999886      566543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=6.3e-41  Score=356.35  Aligned_cols=250  Identities=21%  Similarity=0.348  Sum_probs=200.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-----hhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-----DCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-----~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||||++.....     ...+. +.++..++..+ +||||+.+++++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~-~~~E~~~l~~l-~hpnIv~~~~~~   95 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETG------QQFAVKIVDVAKFTSSPGLSTED-LKREASICHML-KHPHIVELLETY   95 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHTSSSCCHHH-HHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCC------CEEEEEEEEhhhccccccchHHH-HHHHHHHHHhC-CCCCCCcEEEEE
Confidence            67999999999999999999988765      4899999854211     11233 33344555555 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc---EEEE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLG  191 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~---vkL~  191 (632)
                      ..++.+||||||++ |+|.+.+....  +..+++..++.++.||+.||+|||+++|+||||||+|||++.++.   +||+
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~  175 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG  175 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEe
Confidence            99999999999998 67877776542  346899999999999999999999999999999999999987654   9999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++......   ......+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.. .+++..+....
T Consensus       176 Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~  248 (351)
T 3c0i_A          176 GFGVAIQLGESG---LVAGGRVGTPHFMAPEVVKRE---PYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGK  248 (351)
T ss_dssp             CCTTCEECCTTS---CBCCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTC
T ss_pred             cCcceeEecCCC---eeecCCcCCcCccCHHHHcCC---CCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCC
Confidence            999998764321   122345799999999999743   67899999999999999999999998853 44555554322


Q ss_pred             cCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPC--IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~--~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....  ....+++++.+||.+||+.||++||++.++++
T Consensus       249 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            2211  11578999999999999999999999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3.9e-41  Score=350.65  Aligned_cols=259  Identities=19%  Similarity=0.299  Sum_probs=195.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH--HHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA--KVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++........  ...+.++..++..+ +||||+.+++++..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   83 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDH------RDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEA   83 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCC------ceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeec
Confidence            478999999999999999999987655      4899999976432221  12223333344444 79999999998876


Q ss_pred             CC----EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          120 NG----KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       120 ~~----~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      .+    ..||||||++ |+|.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        84 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg  161 (311)
T 3ork_A           84 ETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG  161 (311)
T ss_dssp             EETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred             cCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeecc
Confidence            43    4599999998 5888877654  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++................||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.+..+...........+
T Consensus       162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~  238 (311)
T 3ork_A          162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP  238 (311)
T ss_dssp             CC------------------CCTTCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC
T ss_pred             CcccccccccccccccccCcCcccCCHHHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC
Confidence            997654332222223445799999999999743   68899999999999999999999999988877665555332222


Q ss_pred             C--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH-HHHHhh
Q 006772          275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAFESS  312 (632)
Q Consensus       275 ~--~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell-~~Le~~  312 (632)
                      .  .+..+++++.++|.+||+.||++||+..+++ +.|...
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            1  2356899999999999999999999655544 555443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=7.6e-41  Score=361.37  Aligned_cols=258  Identities=18%  Similarity=0.284  Sum_probs=203.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccC-CCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRE-SQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~-h~~I~~l~~~  116 (632)
                      .+..++|++.+.||+|+||.||+|.+.. +      +.||||++..... ......+.++..++..+.+ |+||+.++++
T Consensus        52 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~------~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~  124 (390)
T 2zmd_A           52 SVKGRIYSILKQIGSGGSSKVFQVLNEK-K------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY  124 (390)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECTT-C------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             cccCCceEEEEEEccCCCeEEEEEEcCC-C------CEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEE
Confidence            3455679999999999999999998754 2      4899999975432 2222233444456666654 8999999999


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      +..++.+|||||+..|+|.+++...  ..+++.+++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||++
T Consensus       125 ~~~~~~~~lv~E~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a  201 (390)
T 2zmd_A          125 EITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA  201 (390)
T ss_dssp             EECSSEEEEEEECCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSS
T ss_pred             EecCCEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCcc
Confidence            9999999999998778999888653  4789999999999999999999999999999999999995 589999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCC--------CCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHH
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--------VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSV  267 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i  267 (632)
                      +...... ........+||+.|||||++.+.        ....++.++|||||||++|||++|..||.+.. .......+
T Consensus       202 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~  280 (390)
T 2zmd_A          202 NQMQPDT-TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI  280 (390)
T ss_dssp             CCC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred             ccccCCC-ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHH
Confidence            8653221 11122345799999999998642        12358899999999999999999999998754 33445555


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ........+|...+.++.+||.+||+.||.+||++.++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          281 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            5445556677888999999999999999999999999986

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5e-41  Score=364.12  Aligned_cols=246  Identities=20%  Similarity=0.273  Sum_probs=190.8

Q ss_pred             CCeEEE-eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l~-~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      ++|.+. +.||+|+||+||+|.++.++      +.||||++....     .. .++..++.++.+|+||+.+++++..  
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~------~~vAiK~~~~~~-----~~-~~E~~~~~~~~~hp~iv~l~~~~~~~~  128 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQ------EKFALKMLQDCP-----KA-RREVELHWRASQCPHIVRIVDVYENLY  128 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECSH-----HH-HHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCC------CEEEEEEeCcch-----hH-HHHHHHHHHhcCCCCcceEeEEEeecc
Confidence            578887 78999999999999988765      489999996421     22 2223344455689999999998875  


Q ss_pred             --CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEec
Q 006772          120 --NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGDF  193 (632)
Q Consensus       120 --~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~DF  193 (632)
                        ++.+||||||++ |+|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.   ++.+||+||
T Consensus       129 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence              567999999998 58888887644457999999999999999999999999999999999999997   789999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH----HHHHHHh
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE----IYHSVVI  269 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e----i~~~i~~  269 (632)
                      |+++.....    ......+||+.|+|||++.+   ..++.++|||||||++|||++|..||.+.....    +...+..
T Consensus       209 G~a~~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~  281 (400)
T 1nxk_A          209 GFAKETTSH----NSLTTPCYTPYYVAPEVLGP---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM  281 (400)
T ss_dssp             TTCEECC---------------CTTCCGGGSCC---CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH
T ss_pred             ccccccCCC----CccccCCCCCCccCHhhcCC---CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc
Confidence            999865322    22345689999999999864   468899999999999999999999998754321    2333332


Q ss_pred             hccCCCC--CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 KKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~~~~p~~--p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .......  ...+++++.+||.+||+.||++||++.++++
T Consensus       282 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          282 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            2222221  2568999999999999999999999999987

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.8e-41  Score=347.60  Aligned_cols=261  Identities=20%  Similarity=0.328  Sum_probs=208.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .|..++|++.+.||+|+||.||+|.+..+++. ......||+|++........+.+.++ ..++..+ +|+||+.+++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~   81 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKL-SHKHLVLNYGVC   81 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHH-HHHHHTS-CCTTBCCEEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHH-HHHHHhC-CCCCEeEEEEEE
Confidence            45678999999999999999999998765421 01124799999976554444444443 3445555 699999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc--------E
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ--------L  188 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~--------v  188 (632)
                      ..++..++||||++ |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.        +
T Consensus        82 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           82 VCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             CCTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EeCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence            99999999999998 5888887654 345999999999999999999999999999999999999999887        9


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEEIYHSV  267 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~ei~~~i  267 (632)
                      ||+|||++.....       .....||+.|+|||++.+.  ..++.++|||||||++|||++| .+||...+........
T Consensus       161 kl~Dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~  231 (289)
T 4fvq_A          161 KLSDPGISITVLP-------KDILQERIPWVPPECIENP--KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY  231 (289)
T ss_dssp             EECCCCSCTTTSC-------HHHHHHTTTTSCHHHHHCG--GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             eeccCcccccccC-------ccccCCcCcccCHHHhCCC--CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence            9999998864321       1234579999999998742  3588999999999999999995 5555555554433322


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                         .....+|...++++.++|.+||+.||++||++.++++.|+.+..
T Consensus       232 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          232 ---EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             ---HTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             ---hccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence               34556677889999999999999999999999999999987654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.1e-40  Score=342.92  Aligned_cols=250  Identities=25%  Similarity=0.397  Sum_probs=200.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.++.++      ..||+|++...........+.++..++..+ +||||+.+++++...+.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   94 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSG------LERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHN   94 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             hheeecceeccCCCeEEEEEEEccCC------ceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCe
Confidence            68999999999999999999987655      489999987543222222333344555555 68999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecCCc
Q 006772          123 ICIAMKFYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIP  196 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFGla  196 (632)
                      .|+||||++ |+|.+.+...  .+..+++..++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            999999998 5888887654  34689999999999999999999999999999999999999   45678999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-  275 (632)
                      +.....    .......||+.|+|||++.    +.++.++|+|||||++|||++|..||.+.+..+....+........ 
T Consensus       175 ~~~~~~----~~~~~~~~t~~y~aPE~~~----~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  246 (285)
T 3is5_A          175 ELFKSD----EHSTNAAGTALYMAPEVFK----RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAV  246 (285)
T ss_dssp             CC--------------CTTGGGCCHHHHT----TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC
T ss_pred             eecCCc----ccCcCcccccCcCChHHhc----cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccccc
Confidence            764322    1223457899999999985    3578999999999999999999999999888777665543322222 


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....+++++.+||.+||+.||++||++.|+++
T Consensus       247 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            12457999999999999999999999999886

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=7.1e-41  Score=350.09  Aligned_cols=270  Identities=19%  Similarity=0.276  Sum_probs=211.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..++.+.|++.+.||+|+||.||++.+.....  ..++.||||++...........+.++..++..+ .|+||+.+++++
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~  102 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTND--GTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCC  102 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC----CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCC--CCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEE
Confidence            34555666999999999999999997754332  345789999998654333333344444556665 589999999999


Q ss_pred             EEC--CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          118 VIN--GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       118 ~~~--~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ...  ..+++||||++ |+|.+++..   ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       103 ~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  179 (318)
T 3lxp_A          103 EDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG  179 (318)
T ss_dssp             EETTTTEEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred             ecCCCceEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcc
Confidence            884  68999999998 477777643   359999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH------------
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE------------  262 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e------------  262 (632)
                      +++................||+.|+|||++.+.   .++.++|||||||++|||++|..||.......            
T Consensus       180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~  256 (318)
T 3lxp_A          180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT  256 (318)
T ss_dssp             GCEECCTTCSEEEC---CCCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHH
T ss_pred             ccccccccccccccccCCCCCceeeChHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchh
Confidence            998764332111122334678899999999743   57889999999999999999999997643210            


Q ss_pred             --HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          263 --IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       263 --i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                        ..............+..+++++.+||.+||+.||++||++.++++.|+.+...+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          257 VLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence              112223344556678899999999999999999999999999999998876544

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=9.4e-41  Score=344.88  Aligned_cols=254  Identities=22%  Similarity=0.367  Sum_probs=207.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh---hHHHHHHHHHHHhhhccCCCceeEeeEEEE-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED---CAKVFVNKFEELFPKFRESQSVCWLHGISV-  118 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~il~~l~~h~~I~~l~~~~~-  118 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++......   .....+.++..++..+ +|+||+.+++++. 
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   77 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETL------CRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYN   77 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTC------CEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCC------cEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEc
Confidence            68999999999999999999987655      48999998653211   1122233444555555 6999999999884 


Q ss_pred             -ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 -INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 -~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                       ..+..|+||||+++++.+.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           78 EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE  157 (305)
T ss_dssp             C---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence             4567999999999888888877666789999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ...... .........||+.|+|||++.+. ...++.++|+|||||++|||++|..||.+.+..+....+.  .....++
T Consensus       158 ~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~--~~~~~~~  233 (305)
T 2wtk_C          158 ALHPFA-ADDTCRTSQGSPAFQPPEIANGL-DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG--KGSYAIP  233 (305)
T ss_dssp             ECCTTC-SSCEECCCCSCGGGCCHHHHTCC-SCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HCCCCCC
T ss_pred             ccCccc-cccccccCCCCCCCcChhhccCc-ccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh--cCCCCCC
Confidence            753321 11222345689999999998643 2234779999999999999999999999988877776655  3455678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+++++.++|.+||+.||.+||++.++++
T Consensus       234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            899999999999999999999999999986

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-40  Score=359.05  Aligned_cols=250  Identities=20%  Similarity=0.321  Sum_probs=206.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++..........+ .++..++..+ +|+||+.+++++..++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~-~~E~~il~~l-~hpnIv~~~~~~~~~~  121 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATG------RVFVAKFINTPYPLDKYTV-KNEISIMNQL-HHPKLINLHDAFEDKY  121 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSHHHHHHH-HHHHHHHTTC-CSTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCC------CEEEEEEecccchhhHHHH-HHHHHHHHhC-CCcCCCeEEEEEEeCC
Confidence            368999999999999999999988665      4899999976554333333 3344555555 7999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec--CCcEEEEecCCcee
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE--HDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~--~g~vkL~DFGlak~  198 (632)
                      .+|+||||+. |+|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.  ++.+||+|||+++.
T Consensus       122 ~~~lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          122 EMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             EEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEeccccee
Confidence            9999999998 577777653 2357999999999999999999999999999999999999984  47899999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--CCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--PCI  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--p~~  276 (632)
                      ....    ......+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+....+......  +..
T Consensus       201 ~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~  273 (387)
T 1kob_A          201 LNPD----EIVKVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA  273 (387)
T ss_dssp             CCTT----SCEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST
T ss_pred             cCCC----cceeeeccCCCccCchhccCC---CCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc
Confidence            5432    122345799999999999743   6889999999999999999999999998887777666543322  223


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+++++.+||.+||+.||++||++.++++
T Consensus       274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            3578999999999999999999999999886

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1e-40  Score=343.45  Aligned_cols=266  Identities=21%  Similarity=0.315  Sum_probs=211.1

Q ss_pred             CCcCCCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..++.++|++.+ .||+|+||.||+|.+....    ..+.||||++...... .....+.++..++..+ +|+||+.+++
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~   85 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKK----VVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIG   85 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEECSS----SEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             eeecchhhhhccCccccccCeeeEeeeecCCC----ceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEE
Confidence            456778999999 9999999999999764321    2358999999754322 1122233344455555 7999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++ ..+..++||||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        86 ~~-~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  162 (291)
T 1xbb_A           86 IC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG  162 (291)
T ss_dssp             EE-ESSSEEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             EE-CCCCcEEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCC
Confidence            98 6678899999998 578877764  3579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++................||+.|+|||++.+.   .++.++|+||||+++|||++ |..||.+.+..++...+. ....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~  238 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGER  238 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCC
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccC---CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCC
Confidence            998764322111112233567899999998643   57889999999999999999 999999988877766554 3455


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +..|..+++++.++|.+||+.||.+||++.++++.|+.+...
T Consensus       239 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          239 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            667889999999999999999999999999999999887643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=4e-41  Score=370.37  Aligned_cols=259  Identities=23%  Similarity=0.400  Sum_probs=210.4

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|..++|++.+.||+|+||.||+|.+..+       ..||||+++..... .+.+.+ +..++..+ +||||+.+++++
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-------~~vavK~~~~~~~~-~~~~~~-E~~~l~~l-~hp~iv~~~~~~  248 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKTLKPGTMS-PEAFLQ-EAQVMKKL-RHEKLVQLYAVV  248 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTT-------EEEEEEECCTTSSC-HHHHHH-HHHHHHHC-CCTTBCCEEEEE
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECCC-------ceEEEEEeccCCCC-HHHHHH-HHHHHHhC-CCCCEeeEEEEE
Confidence            447779999999999999999999998643       36999999764422 234433 34555555 689999999987


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .. +.+||||||++ |+|.+++....+..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus       249 ~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a  327 (452)
T 1fmk_A          249 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA  327 (452)
T ss_dssp             CS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred             cC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccc
Confidence            65 67899999998 68999887655567999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......+|+.|+|||++..   +.++.++|||||||++|||++ |..||.+.+..++...+. ...+..
T Consensus       328 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~  401 (452)
T 1fmk_A          328 RLIEDNEY--TARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMP  401 (452)
T ss_dssp             C----------------CCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCC
T ss_pred             eecCCCce--ecccCCcccccccCHhHHhc---CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCC
Confidence            86533211  11123356889999999863   468999999999999999999 999999998888777665 344566


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .|..+|+++.++|.+||+.||++||++.+|++.|+.+.
T Consensus       402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            78899999999999999999999999999999998654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.7e-41  Score=346.20  Aligned_cols=266  Identities=26%  Similarity=0.425  Sum_probs=207.2

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ..+..++|++.+.||+|+||.||+|.+.....   ....||||+++...   ....+.+. ++..++..+ +|+||+.++
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~-~e~~~l~~l-~h~~i~~~~   87 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSG---KTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL-DHRNLIRLY   87 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTS---CEEEEEEEC--------CHHHHHHH-HHHHHHHHC-CCTTBCCEE
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCC---ceeEEEEEEEccCccCCHHHHHHHH-HHHHHHHhC-CCCCcccEE
Confidence            45677899999999999999999998754331   22469999987542   12223333 333445555 699999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++..++ .++||||+. |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        88 ~~~~~~~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Df  165 (291)
T 1u46_A           88 GVVLTPP-MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF  165 (291)
T ss_dssp             EEECSSS-CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCC
T ss_pred             EEEccCC-ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccc
Confidence            9987654 889999998 6888888654 357999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      |++.................+|+.|+|||++.+.   .++.++|+||||+++|||++ |..||.+.+..+....+.....
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~  242 (291)
T 1u46_A          166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE  242 (291)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC
T ss_pred             cccccccccccchhhhccCCCCceeeCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCC
Confidence            9998764332211122334678899999998643   57889999999999999999 9999999998888777766556


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+..+..+|+++.++|.+||+.||++||++.++++.|+.+.
T Consensus       243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          243 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            66677889999999999999999999999999999998765

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=6.2e-41  Score=348.38  Aligned_cols=261  Identities=19%  Similarity=0.263  Sum_probs=200.9

Q ss_pred             CCeEEE-eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~-~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +.|++. +.||+|+||.||+|.+..++      +.||||++..........+.++ ..++.++..|+||+.+++++..++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~E-~~~l~~~~~h~~i~~~~~~~~~~~   84 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITS------QEYAVKIIEKQPGHIRSRVFRE-VEMLYQCQGHRNVLELIEFFEEED   84 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSC------CEEEEEEEECCSSCCHHHHHHH-HHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCC------cEEEEEEEeeCcchhHHHHHHH-HHHHHHhcCCCCeeeEEEEEeeCC
Confidence            679985 78999999999999987655      4899999976544433444444 345566678999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc---EEEEecCCce
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPY  197 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~---vkL~DFGlak  197 (632)
                      .+|+||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.   +||+|||++.
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           85 RFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             EEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            9999999998 6888888654  47999999999999999999999999999999999999998776   9999999987


Q ss_pred             eccCCCC----CCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCH-----------
Q 006772          198 LLLGRSL----SDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-----------  260 (632)
Q Consensus       198 ~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-----------  260 (632)
                      .......    ........+||+.|+|||++....  ...++.++|||||||++|||++|..||.+...           
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  242 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC  242 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred             ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence            6432111    111223456999999999986310  12477899999999999999999999987542           


Q ss_pred             ----HHHHHHHHhhccCCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          261 ----EEIYHSVVIKKEKPCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       261 ----~ei~~~i~~~~~~p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                          ..+...+..  ....+|    ..+++++.+||.+||+.||.+||++.|+++      ++++...
T Consensus       243 ~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~------hp~~~~~  302 (316)
T 2ac3_A          243 PACQNMLFESIQE--GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ------HPWVQGC  302 (316)
T ss_dssp             HHHHHHHHHHHHH--CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH------STTCC--
T ss_pred             hhHHHHHHHHHhc--cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc------ChhhcCC
Confidence                233444432  233344    468999999999999999999999999887      5666543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-40  Score=345.39  Aligned_cols=256  Identities=20%  Similarity=0.347  Sum_probs=202.9

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||||++...... ...+ .++..++..+.+|+||+.+++++.. 
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~-~~~~-~~e~~~l~~l~~h~~i~~~~~~~~~~   93 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTG------QLAAIKVMDVTGDE-EEEI-KQEINMLKKYSHHRNIATYYGAFIKK   93 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSST-THHH-HHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCC------CeEEEEEEecCccc-HHHH-HHHHHHHHhccCCCCeeeeeeEEeec
Confidence            3578999999999999999999987655      48999998754332 2333 3344556667789999999999887 


Q ss_pred             -----CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 -----NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 -----~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                           ++.+|+||||++| +|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Df  173 (326)
T 2x7f_A           94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF  173 (326)
T ss_dssp             C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred             cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeC
Confidence                 5689999999985 8888887655568999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCC--CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |++......   ........||+.|+|||++....  ...++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus       174 g~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  250 (326)
T 2x7f_A          174 GVSAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP  250 (326)
T ss_dssp             TTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred             cCceecCcC---ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc
Confidence            998765321   11223457899999999986321  3457899999999999999999999999888776655554433


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .....+..+++.+.++|.+||..||.+||++.++++
T Consensus       251 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          251 APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            333345678999999999999999999999999886

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1e-40  Score=347.83  Aligned_cols=263  Identities=19%  Similarity=0.285  Sum_probs=207.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhcc--CCCceeEeeEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFR--ESQSVCWLHGIS  117 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~--~h~~I~~l~~~~  117 (632)
                      .++|++.+.||+|+||.||+|.+....     ++.||||++......  ....+.++ ..++..+.  .||||+.+++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e-~~~l~~l~~~~h~~i~~~~~~~   83 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNG-----GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVVRLFDVC   83 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTT-----TEEEEEEEEEEEBCTTSCBCTHHHH-HHHHHHHHHTCCTTBCCEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCC-----CEEEEEEEeccCcccccCCchhhHH-HHHHHhhhccCCCCeEeeeeee
Confidence            378999999999999999999985322     258999998643211  01112222 23333332  799999999988


Q ss_pred             E-----ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          118 V-----INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       118 ~-----~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      .     .....++||||++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           84 TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             EEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred             eecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEec
Confidence            7     45679999999999999998876556799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++.....    .......||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+....+.....
T Consensus       164 fg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  236 (326)
T 1blx_A          164 FGLARIYSFQ----MALTSVVVTLWYRAPEVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG  236 (326)
T ss_dssp             CCSCCCCCGG----GGGCCCCCCCTTCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             CcccccccCC----CCccccccccceeCHHHHhc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcC
Confidence            9998764321    12334578999999999974   3688999999999999999999999999887766655543211


Q ss_pred             CC-------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          273 KP-------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       273 ~p-------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      .+                         .++..+++++.+||.+||+.||++||++.++++      ++++.+..+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~~~~~~  306 (326)
T 1blx_A          237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS------HPYFQDLERC  306 (326)
T ss_dssp             CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGTTCCCC
T ss_pred             CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc------Cccccccchh
Confidence            11                         123568999999999999999999999999886      6666655443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.7e-40  Score=340.32  Aligned_cols=265  Identities=19%  Similarity=0.259  Sum_probs=213.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-----h---hHHHHHHHHHHHhhhccCCCceeEe
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-----D---CAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-----~---~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      .++|++.+.||+|+||.||+|.++.++      +.||||++.....     .   ...+...++..++.++.+||||+.+
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTC------KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   89 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcC------ceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            479999999999999999999987665      4899999975421     1   1122233444566777789999999


Q ss_pred             eEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++..++..++||||++ |+|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~d  167 (298)
T 1phk_A           90 KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD  167 (298)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             eeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEec
Confidence            999999999999999998 5888887654  4799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCC---CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~  269 (632)
                      ||++......    .......||+.|+|||++.+.   ....++.++|+||||+++|||++|..||.+.+..+....+..
T Consensus       168 fg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  243 (298)
T 1phk_A          168 FGFSCQLDPG----EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS  243 (298)
T ss_dssp             CTTCEECCTT----CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccchhhcCCC----cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhc
Confidence            9999865332    122345789999999998521   133578899999999999999999999999888777766654


Q ss_pred             hccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          270 KKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       270 ~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                      .......+  ..+++++.++|.+||+.||++||++.++++      ++++....++.
T Consensus       244 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~~~~  294 (298)
T 1phk_A          244 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA------HPFFQQYVVEE  294 (298)
T ss_dssp             TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT------SGGGCTTC---
T ss_pred             CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh------ChHhhhccchh
Confidence            43333222  468999999999999999999999999886      66776655544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=4.3e-40  Score=336.51  Aligned_cols=249  Identities=21%  Similarity=0.339  Sum_probs=205.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++....  ...... +.++..++..+ +|+||+.+++++..
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~-~~~e~~~l~~l-~h~~i~~~~~~~~~   76 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINTKKLSARDFQK-LEREARICRKL-QHPNIVRLHDSIQE   76 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCHHHHHH-HHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCC------ceEEEEEeecccCCHHHHHH-HHHHHHHHHHc-CCCCcCeEEEEEEc
Confidence            478999999999999999999988765      489999986533  222222 33344555555 69999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc---EEEEecCC
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGI  195 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~---vkL~DFGl  195 (632)
                      ++..++||||+.| +|.+.+...  ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.   +||+|||+
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~  154 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL  154 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeecee
Confidence            9999999999984 777777654  47999999999999999999999999999999999999987665   99999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +......    .......||+.|+|||++.+   ..++.++|+||||+++|+|++|..||.+.+..+....+........
T Consensus       155 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  227 (284)
T 3kk8_A          155 AIEVNDS----EAWHGFAGTPGYLSPEVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP  227 (284)
T ss_dssp             CEECCSS----CBCCCSCSCGGGCCHHHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             eEEcccC----ccccCCCCCcCCcCchhhcC---CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCC
Confidence            9765332    22234578999999999974   3678999999999999999999999999988887777664433332


Q ss_pred             CC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+  ..+++++.++|.+||+.||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            22  478999999999999999999999999886

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.5e-40  Score=349.42  Aligned_cols=265  Identities=18%  Similarity=0.264  Sum_probs=206.5

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc-----CCCcee
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR-----ESQSVC  111 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~-----~h~~I~  111 (632)
                      ..++ .++|++.+.||+|+||.||+|.+..++.     +.||||+++.... .... ...+..++..+.     .+.+++
T Consensus        14 g~~~-~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~vavK~~~~~~~-~~~~-~~~E~~~l~~l~~~~~~~~~~~~   85 (355)
T 2eu9_A           14 GDWL-QERYEIVGNLGEGTFGKVVECLDHARGK-----SQVALKIIRNVGK-YREA-ARLEINVLKKIKEKDKENKFLCV   85 (355)
T ss_dssp             TCEE-TTTEEEEEEEEEETTEEEEEEEETTTTT-----EEEEEEEECSCHH-HHHH-HHHHHHHHHHHHHHCTTSCSCBC
T ss_pred             Ccee-cccEEEEEEeeccCCeEEEEEEecCCCc-----eEEEEEEEccccc-chhH-HHHHHHHHHHHhhcCCCCceeEE
Confidence            4444 4789999999999999999999876542     4899999975432 2222 233333444443     233488


Q ss_pred             EeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---------
Q 006772          112 WLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---------  182 (632)
Q Consensus       112 ~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---------  182 (632)
                      .+.+++...+..||||||+.|++++.+.......+++..++.++.||+.||+|||+++|+||||||+|||+         
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~  165 (355)
T 2eu9_A           86 LMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY  165 (355)
T ss_dssp             CEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEE
T ss_pred             EeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccc
Confidence            88899999999999999999999999887655689999999999999999999999999999999999999         


Q ss_pred             ----------ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCC
Q 006772          183 ----------SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI  252 (632)
Q Consensus       183 ----------d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~  252 (632)
                                +.++.+||+|||+++....      ......||+.|+|||++.+   ..++.++|+|||||++|||++|.
T Consensus       166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~g~  236 (355)
T 2eu9_A          166 NEHKSCEEKSVKNTSIRVADFGSATFDHE------HHTTIVATRHYRPPEVILE---LGWAQPCDVWSIGCILFEYYRGF  236 (355)
T ss_dssp             CCC-CCCEEEESCCCEEECCCTTCEETTS------CCCSSCSCGGGCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccCCCcEEEeecCccccccc------cccCCcCCCcccCCeeeec---CCCCCccchHHHHHHHHHHHhCC
Confidence                      6788999999999976422      2234578999999999974   36889999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhccCC------------------------------------------CCCCCCCHHHHHHHHH
Q 006772          253 QPWFGKSVEEIYHSVVIKKEKP------------------------------------------CIPSGLPPAVENVIIG  290 (632)
Q Consensus       253 ~PF~~~~~~ei~~~i~~~~~~p------------------------------------------~~p~~lp~~l~~LI~~  290 (632)
                      .||.+.+..+....+.......                                          ......++++.+||.+
T Consensus       237 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  316 (355)
T 2eu9_A          237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRR  316 (355)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHH
Confidence            9999887665444332211110                                          0011224589999999


Q ss_pred             hhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          291 CFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       291 cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                      ||+.||++||++.++++      ++++.+.+++.
T Consensus       317 ~L~~dP~~Rpt~~e~l~------hp~f~~~~~~~  344 (355)
T 2eu9_A          317 MLEFDPAQRITLAEALL------HPFFAGLTPEE  344 (355)
T ss_dssp             HTCSSTTTSCCHHHHTT------SGGGGGCCHHH
T ss_pred             HhcCChhhCcCHHHHhc------ChhhcCCChhh
Confidence            99999999999999876      67777666554

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-40  Score=341.60  Aligned_cols=265  Identities=21%  Similarity=0.290  Sum_probs=209.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCEE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKI  123 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~l  123 (632)
                      .|++.+.||+|+||.||+|.+..+..   ....||+|.+.........+...++..++..+ +|+||+.+++++...+..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQ---NRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSS---CEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSC
T ss_pred             EEccCceeccCCCceEEEEEEecCCC---ceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCC
Confidence            46778999999999999999865442   23479999997654433333333444555555 799999999998766554


Q ss_pred             -EEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          124 -CIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       124 -~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                       +++|||+. |+|.+++.. ....+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        98 ~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             cEEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence             99999997 678777754 346789999999999999999999999999999999999999999999999999976533


Q ss_pred             CCC-CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          202 RSL-SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       202 ~~~-~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ... .........||+.|+|||.+.+   ..++.++|+|||||++|+|++ +.+||...+..+....+. .......+..
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  252 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQT---YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEY  252 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTT---CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCCCCTT
T ss_pred             CcccccccCcCCCCCccccChhhhcc---CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCCCCcc
Confidence            211 1122234567899999999974   368899999999999999999 555566666655555444 3445666788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhccc
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVY  317 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~  317 (632)
                      +++++.+++.+||+.||.+||++.++++.|+.+...+.
T Consensus       253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999998876543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=378.61  Aligned_cols=265  Identities=17%  Similarity=0.316  Sum_probs=210.6

Q ss_pred             CcCCCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .+..+++.+.+ .||+|+||.||+|.++..+    ....||||+++..... ..+.+.+ +..++..+ +|+||+.++++
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~-E~~il~~l-~hpniv~l~~~  404 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRK----KQIDVAIKVLKQGTEKADTEEMMR-EAQIMHQL-DNPYIVRLIGV  404 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECSS----CEEEEEEEECCCCCSSTTHHHHHH-HHHHHTTC-CCTTBCCEEEE
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecCC----CcEEEEEEEcCCCCChHHHHHHHH-HHHHHHhC-CCCCEeeEEEE
Confidence            46667888887 8999999999999886432    2357999999764332 3344444 44555555 79999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +.. +.+||||||+. |+|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       405 ~~~-~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGl  482 (613)
T 2ozo_A          405 CQA-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGL  482 (613)
T ss_dssp             EES-SSEEEEEECCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCST
T ss_pred             ecc-CCeEEEEEeCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccC
Confidence            865 56999999998 577777653 346799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++................+|+.|+|||++..   +.++.++|||||||+||||++ |..||.+.+..++...+. ...++
T Consensus       483 a~~~~~~~~~~~~~~~~~~~~~y~APE~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~  558 (613)
T 2ozo_A          483 SKALGADDSYYTARSAGKWPLKWYAPECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRM  558 (613)
T ss_dssp             TTTCC--------------CCTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-TTCCC
T ss_pred             cccccCCCceeeeccCCCCccceeCHhhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            9765322111111122345789999999863   468999999999999999998 999999988887776665 34566


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ..|..+|+++.+||.+||+.||++||++.+|++.|+.+...
T Consensus       559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            77889999999999999999999999999999999876543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.1e-40  Score=354.09  Aligned_cols=252  Identities=21%  Similarity=0.254  Sum_probs=191.5

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ...+.++|++.+.||+|+||.||+|.++.++      +.||||++....... ..+. ++..++..+ +||||+.+++++
T Consensus        15 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~-~~~~-~E~~~l~~l-~hpniv~~~~~~   85 (361)
T 3uc3_A           15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTK------ELVAVKYIERGAAID-ENVQ-REIINHRSL-RHPNIVRFKEVI   85 (361)
T ss_dssp             CCCCTTTEEEEEEESSSTTSSEEEEEETTTC------CEEEEEEEESSTTSC-HHHH-HHHHHHHHC-CCTTBCCEEEEE
T ss_pred             CCCCCCcEEEEEEeccCCCEEEEEEEECCCC------cEEEEEEEecCcccc-HHHH-HHHHHHHhC-CCCCCCcEEEEE
Confidence            3445689999999999999999999998765      489999997543322 2222 333444444 699999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc--EEEEecC
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ--LVLGDFG  194 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~--vkL~DFG  194 (632)
                      ..++.+||||||+. |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.  +||+|||
T Consensus        86 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg  163 (361)
T 3uc3_A           86 LTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG  163 (361)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred             eeCCEEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecC
Confidence            99999999999997 5888877654  47999999999999999999999999999999999999987765  9999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCC-cccccchhHHHHHHHHhCCCCCCCCCH----HHHHHHHHh
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPIS-FETDTWGFGCSIMEMLTGIQPWFGKSV----EEIYHSVVI  269 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t-~ksDvwSlGvvL~EmltG~~PF~~~~~----~ei~~~i~~  269 (632)
                      +++.....    .......||+.|+|||++.+.   .++ .++|||||||++|||++|..||.+...    ......+..
T Consensus       164 ~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~  236 (361)
T 3uc3_A          164 YSKSSVLH----SQPKSTVGTPAYIAPEVLLRQ---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS  236 (361)
T ss_dssp             CC-------------------CTTSCHHHHHCS---SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHT
T ss_pred             cccccccc----CCCCCCcCCCCcCChhhhcCC---CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc
Confidence            98743221    222345799999999998743   343 459999999999999999999987543    334444443


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .....+.+..+++++.+||.+||+.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            22222233468999999999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=7.4e-41  Score=344.58  Aligned_cols=258  Identities=20%  Similarity=0.368  Sum_probs=197.0

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      -.++|++.+.||+|+||+||+|.+.  +      +.||||++....   ...+..+.+.......+|+||+.+++++.. 
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~--~------~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~   74 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQ--G------ENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTS   74 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEET--T------EEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEEC--C------EEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccc
Confidence            3578999999999999999999873  2      479999986532   233333332222223589999999988654 


Q ss_pred             ---CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceeeeeeCCeEEEecCCc
Q 006772          120 ---NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH--------SIGLLVLNLKPSNLLLSEHDQ  187 (632)
Q Consensus       120 ---~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLH--------s~~IvHRDLKP~NILld~~g~  187 (632)
                         ...+|+||||++ |+|.+++.   ...+++..++.++.||+.||+|||        +++|+||||||+|||++.++.
T Consensus        75 ~~~~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~  151 (301)
T 3q4u_A           75 RHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ  151 (301)
T ss_dssp             ETTEEEEEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSC
T ss_pred             cCCCceeEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCC
Confidence               256899999998 58888773   357999999999999999999999        999999999999999999999


Q ss_pred             EEEEecCCceeccCCCCC-CCccccccCCCccCCccccCCCCCC---CCCcccccchhHHHHHHHHhC----------CC
Q 006772          188 LVLGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRG---PISFETDTWGFGCSIMEMLTG----------IQ  253 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g---~~t~ksDvwSlGvvL~EmltG----------~~  253 (632)
                      +||+|||+++........ ........||+.|+|||++.+....   .++.++|||||||++|||++|          ..
T Consensus       152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~  231 (301)
T 3q4u_A          152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP  231 (301)
T ss_dssp             EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence            999999999865432211 1112334799999999999754211   345799999999999999999          88


Q ss_pred             CCCCCC-----HHHHHHHHHhhccCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          254 PWFGKS-----VEEIYHSVVIKKEKPCIPS-----GLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       254 PF~~~~-----~~ei~~~i~~~~~~p~~p~-----~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ||....     .......+......+..|.     .+++++.++|.+||+.||++|||+.++++.|+.+
T Consensus       232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            986532     2333333333333444442     2557899999999999999999999999998764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.4e-40  Score=346.26  Aligned_cols=247  Identities=22%  Similarity=0.355  Sum_probs=203.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|...+.||+|+||.||+|.+..++      +.||||++........+.+.++ ..++..+ +|+||+.+++++..++.
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g------~~vavK~~~~~~~~~~~~~~~E-~~~l~~l-~h~niv~~~~~~~~~~~  116 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSG------RQVAVKMMDLRKQQRRELLFNE-VVIMRDY-QHFNVVEMYKSYLVGEE  116 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCCSHHHHHHH-HHHHTTC-CCTTBCCEEEEEEETTE
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCC------cEEEEEEEeccchhHHHHHHHH-HHHHHhC-CCCCcceEEEEEEECCE
Confidence            35888999999999999999987655      4899999976554444444443 3445555 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .++||||++| +|.+++.   ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus       117 ~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          117 LWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             EEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence            9999999985 6666553   34799999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IPSG  279 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p~~  279 (632)
                      ..   .......||+.|+|||++.+   ..++.++|||||||++|||++|..||.+.+..+....+... ..+.  .+..
T Consensus       194 ~~---~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~  266 (321)
T 2c30_A          194 DV---PKRKSLVGTPYWMAPEVISR---SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-PPPKLKNSHK  266 (321)
T ss_dssp             SS---CCBCCCCSCGGGCCHHHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-SCCCCTTGGG
T ss_pred             Cc---cccccccCCccccCHhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCcCcccc
Confidence            21   12234579999999999974   46889999999999999999999999998877766655432 2222  2346


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++++.++|.+||+.||++||++.++++
T Consensus       267 ~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          267 VSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            8999999999999999999999999886

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.2e-40  Score=355.80  Aligned_cols=250  Identities=20%  Similarity=0.311  Sum_probs=201.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.+.||+|+||.||+|.+..++      +.||||++.......     .++..++..+ +|+||+.+++++..
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~------~~vAiK~~~~~~~~~-----~~E~~il~~l-~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESG------KRFALKKVLQDPRYK-----NRELDIMKVL-DHVNIIKLVDYFYT   71 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTC------CEEEEEEEECCTTSC-----CHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCC------CEEEEEEEecCcchH-----HHHHHHHHHc-CCCCccchhheeee
Confidence            34578999999999999999999988765      489999986543222     1233445554 79999999998844


Q ss_pred             --------------------------------------CCEEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHH
Q 006772          120 --------------------------------------NGKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLA  159 (632)
Q Consensus       120 --------------------------------------~~~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa  159 (632)
                                                            +..+++||||++|+|.+.+...  .+..+++..++.++.||+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  151 (383)
T 3eb0_A           72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLF  151 (383)
T ss_dssp             C-------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             cCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence                                                  3458999999999988877642  356899999999999999


Q ss_pred             HHHHHHHhCCceeeeeeCCeEEEe-cCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCccccc
Q 006772          160 KGISDLHSIGLLVLNLKPSNLLLS-EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDT  238 (632)
Q Consensus       160 ~gL~yLHs~~IvHRDLKP~NILld-~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDv  238 (632)
                      .||+|||+++|+||||||+|||++ .++.+||+|||+++.....    .......||+.|+|||++.+.  ..++.++||
T Consensus       152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  225 (383)
T 3eb0_A          152 RAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----EPSVAYICSRFYRAPELMLGA--TEYTPSIDL  225 (383)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----SCCCCCCCCSSCCCHHHHTTC--SSCCTHHHH
T ss_pred             HHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----CCCcCcccCCCccCHHHhcCC--CCCCcchhh
Confidence            999999999999999999999998 6899999999999875332    222345789999999998743  248899999


Q ss_pred             chhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---------------------------CCCCCCCHHHHHHHHHh
Q 006772          239 WGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---------------------------CIPSGLPPAVENVIIGC  291 (632)
Q Consensus       239 wSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---------------------------~~p~~lp~~l~~LI~~c  291 (632)
                      |||||++|||++|+.||.+.+..+....+......+                           .+|..+|+++.+||.+|
T Consensus       226 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  305 (383)
T 3eb0_A          226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI  305 (383)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence            999999999999999999988776665554321111                           14566899999999999


Q ss_pred             hhcCcCCCCCHHHHHH
Q 006772          292 FEYDLRNRPLMADILH  307 (632)
Q Consensus       292 L~~DP~~RPs~~ell~  307 (632)
                      |+.||.+|||+.|+++
T Consensus       306 L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          306 LRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCSSGGGSCCHHHHHT
T ss_pred             ccCChhhCCCHHHHhc
Confidence            9999999999999886

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=3.8e-40  Score=344.52  Aligned_cols=264  Identities=18%  Similarity=0.321  Sum_probs=204.6

Q ss_pred             CCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee
Q 006772           32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        32 ~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      .......+.+.++|++.+.||+|+||.||+|.+..++      +.||||++.....   .. ..++..++..+.+|+||+
T Consensus        25 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~---~~-~~~E~~~l~~l~~~~~i~   94 (330)
T 3nsz_A           25 YESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNN------EKVVVKILKPVKK---KK-IKREIKILENLRGGPNII   94 (330)
T ss_dssp             GGGCCCCCEEGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECSCCH---HH-HHHHHHHHHHHTTSTTBC
T ss_pred             hhhhhhcccCCCceEEEEEecccCCeEEEEEEECCCC------cEEEEEEecccch---HH-HHHHHHHHHHcCCCCCEE
Confidence            3344455556789999999999999999999987765      4899999975443   22 334446667777899999


Q ss_pred             EeeEEEEE--CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-c
Q 006772          112 WLHGISVI--NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-Q  187 (632)
Q Consensus       112 ~l~~~~~~--~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~  187 (632)
                      .+++++..  ....++||||+.| +|.+++ +    .+++.+++.++.||+.||+|||+++|+||||||+|||++.++ .
T Consensus        95 ~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~  169 (330)
T 3nsz_A           95 TLADIVKDPVSRTPALVFEHVNNTDFKQLY-Q----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK  169 (330)
T ss_dssp             CEEEEEECTTTCCEEEEEECCCCCCHHHHG-G----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE
T ss_pred             EeeeeeccCCCCceEEEEeccCchhHHHHH-H----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCE
Confidence            99999987  6789999999995 555444 2    489999999999999999999999999999999999999777 8


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHS  266 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~  266 (632)
                      +||+|||+++.....    .......||+.|+|||++.+.  ..++.++|||||||++|||++|..||... +..+....
T Consensus       170 ~kl~Dfg~a~~~~~~----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~  243 (330)
T 3nsz_A          170 LRLIDWGLAEFYHPG----QEYNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR  243 (330)
T ss_dssp             EEECCCTTCEECCTT----CCCCSCCSCGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred             EEEEeCCCceEcCCC----CccccccccccccChhhhcCC--CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHH
Confidence            999999999865332    223345789999999998642  35889999999999999999999999653 23222221


Q ss_pred             HHhh-----------cc------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          267 VVIK-----------KE------------------------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       267 i~~~-----------~~------------------------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      +...           ..                        ....+..+++++.+||.+||+.||++|||+.|+++    
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~----  319 (330)
T 3nsz_A          244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME----  319 (330)
T ss_dssp             HHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT----
T ss_pred             HHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc----
Confidence            1100           00                        01112237999999999999999999999999887    


Q ss_pred             hhhcccCCCCc
Q 006772          312 SQNAVYNDGEW  322 (632)
Q Consensus       312 ~~~~~~~~~~w  322 (632)
                        +++|.+..+
T Consensus       320 --hp~f~~~~~  328 (330)
T 3nsz_A          320 --HPYFYTVVK  328 (330)
T ss_dssp             --SGGGTTCC-
T ss_pred             --CccHhhhcc
Confidence              677766544

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1e-40  Score=340.72  Aligned_cols=261  Identities=23%  Similarity=0.382  Sum_probs=212.0

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|.+...       ..||||.+...... ...+. ++..++..+ +|+||+.+++++
T Consensus         8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~vavK~~~~~~~~-~~~~~-~E~~~l~~l-~h~~i~~~~~~~   77 (279)
T 1qpc_A            8 WEVPRETLKLVERLGAGQFGEVWMGYYNGH-------TKVAVKSLKQGSMS-PDAFL-AEANLMKQL-QHQRLVRLYAVV   77 (279)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTT-------EEEEEEEECTTSSC-HHHHH-HHHHHHHHC-CCTTBCCEEEEE
T ss_pred             cccCHHhhhheeeecCCCCeEEEEEEEcCC-------cEEEEEEecCCccc-HHHHH-HHHHHHHhC-CCcCcceEEEEE
Confidence            446678999999999999999999987532       47999999754322 23333 334555555 799999999987


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      . ++..++||||++ |+|.+++....+..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        78 ~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  156 (279)
T 1qpc_A           78 T-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA  156 (279)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             c-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccc
Confidence            5 556899999997 68888775443347999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      ........  .......+|+.|+|||++.+   +.++.++|+|||||++|||++ |..||.+.+..+....+.. ...+.
T Consensus       157 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~  230 (279)
T 1qpc_A          157 RLIEDNEY--TAREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMV  230 (279)
T ss_dssp             EECSSSCE--ECCTTCCCCTTTSCHHHHHH---CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCC
T ss_pred             ccccCccc--ccccCCCCccCccChhhhcc---CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc-ccCCC
Confidence            87543211  11223456889999999863   367889999999999999999 9999999888777666543 34555


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      .+..+++++.+++.+||+.||++||++.++++.|+.+...
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            6788999999999999999999999999999999877643

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=349.26  Aligned_cols=269  Identities=22%  Similarity=0.325  Sum_probs=201.1

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+.++.++|++.+.||+|+||.||+|.+..        +.||||++.....   ..+..+.+........|+||+.+++
T Consensus         6 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~   74 (336)
T 3g2f_A            6 SEPSLDLDNLKLLELIGRGRYGAVYKGSLDE--------RPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIV   74 (336)
T ss_dssp             ---CCCTTSEEEEEEEEECSSEEEEEEEETT--------EEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEE
T ss_pred             cCCCcChHHhheeeecccCCCeEEEEEEECC--------eEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhhee
Confidence            4566788999999999999999999997632        4899999964332   2333333333333468999999987


Q ss_pred             EEEE-----CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---------CceeeeeeCCeE
Q 006772          116 ISVI-----NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI---------GLLVLNLKPSNL  180 (632)
Q Consensus       116 ~~~~-----~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~---------~IvHRDLKP~NI  180 (632)
                      .+..     ...+||||||++ |+|.+++...   .+++..++.++.||+.||+|||++         +|+||||||+||
T Consensus        75 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Ni  151 (336)
T 3g2f_A           75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV  151 (336)
T ss_dssp             EEEEECTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGE
T ss_pred             cccccccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceE
Confidence            6543     236789999997 5888887543   568999999999999999999999         999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCC-----CCccccccCCCccCCccccCCCCC----CCCCcccccchhHHHHHHHHhC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLS-----DSDMALRLGTPNYMAPEQWEPEVR----GPISFETDTWGFGCSIMEMLTG  251 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~-----~~~~~~~~GT~~YmAPE~~~~~~~----g~~t~ksDvwSlGvvL~EmltG  251 (632)
                      |++.++.+||+|||+++.+......     ........||+.|+|||++.+...    ..++.++|||||||++|||++|
T Consensus       152 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  231 (336)
T 3g2f_A          152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR  231 (336)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhc
Confidence            9999999999999999876432211     112234579999999999875211    2456789999999999999999


Q ss_pred             CCCCCCC-C-----------------HHHHHHHHHhhccCCCCCCCC------CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          252 IQPWFGK-S-----------------VEEIYHSVVIKKEKPCIPSGL------PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       252 ~~PF~~~-~-----------------~~ei~~~i~~~~~~p~~p~~l------p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..||... +                 ..+....+.....++.+|..+      ++++.+||.+||+.||++|||+.|+++
T Consensus       232 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             BGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            7775432 1                 112222222334445555543      358999999999999999999999999


Q ss_pred             HHHhhhhcccC
Q 006772          308 AFESSQNAVYN  318 (632)
Q Consensus       308 ~Le~~~~~~~~  318 (632)
                      .|+.+.+.+..
T Consensus       312 ~L~~ll~~~~~  322 (336)
T 3g2f_A          312 RMAELMMIWER  322 (336)
T ss_dssp             HHHHHHHCCCC
T ss_pred             HHHHHHHHHHh
Confidence            99998876653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=9.8e-41  Score=353.10  Aligned_cols=261  Identities=21%  Similarity=0.269  Sum_probs=205.8

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++......  ....+.+ +..++..+ +|+||+.+++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~~~   87 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTG------QKVALKKVLMENEKEGFPITALR-EIKILQLL-KHENVVNLIEICRT   87 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTC------CEEEEEECCCSSCSSSSCHHHHH-HHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCC------CEEEEEEEecccccccchHHHHH-HHHHHHhc-cCCCcccHhheeec
Confidence            368999999999999999999987665      48999998653321  1222333 33445555 69999999999877


Q ss_pred             --------CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          120 --------NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       120 --------~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                              ++.+||||||++|++.+.+... ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~  166 (351)
T 3mi9_A           88 KASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA  166 (351)
T ss_dssp             C--------CEEEEEEECCSEEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             cccccccCCceEEEEEeccCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEc
Confidence                    4579999999999998888654 3579999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCC-CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSL-SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+++....... .........||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+...
T Consensus       167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  244 (351)
T 3mi9_A          167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL  244 (351)
T ss_dssp             CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cchhcccccccccccccccCCcccccCccCchhhcCC--CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            9999987643221 12233456789999999998643  35789999999999999999999999998877666555432


Q ss_pred             ccCCC--CCCC----------------------------CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          271 KEKPC--IPSG----------------------------LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       271 ~~~p~--~p~~----------------------------lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                      ...+.  ....                            .++++.+||.+||+.||++||++.|+++      ++++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~  317 (351)
T 3mi9_A          245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN------HDFFWS  317 (351)
T ss_dssp             HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGGS
T ss_pred             hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC------CCCcCC
Confidence            22211  1111                            2678999999999999999999999887      566643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.7e-40  Score=359.00  Aligned_cols=276  Identities=24%  Similarity=0.312  Sum_probs=214.0

Q ss_pred             CCccccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHh
Q 006772           22 DPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELF  101 (632)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il  101 (632)
                      ++....++++......... ..+|++.+.||+|+||.||+|.+..++       .||+|++.......     .++..++
T Consensus        20 ~~~~~~~~~~~~~~~~~~~-~~~Y~~~~~lG~G~~g~V~~a~~~~~~-------~~aikk~~~~~~~~-----~~E~~il   86 (394)
T 4e7w_A           20 DPNKVIKVLASDGKTGEQR-EIAYTNCKVIGNGSFGVVFQAKLVESD-------EVAIKKVLQDKRFK-----NRELQIM   86 (394)
T ss_dssp             CCCCCEEEEEEESSSCCEE-EEEEEEEEEEEEETTEEEEEEEETTTE-------EEEEEEEECCTTSC-----CHHHHHH
T ss_pred             CCCceEEEEecCCCCCCcc-cceEEEeEEEeeCCCeEEEEEEECCCC-------eEEEEEEecCcchH-----HHHHHHH
Confidence            3444555565555555443 367999999999999999999987644       58888886533221     1233444


Q ss_pred             hhccCCCceeEeeEEEEECC------EEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceee
Q 006772          102 PKFRESQSVCWLHGISVING------KICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVL  173 (632)
Q Consensus       102 ~~l~~h~~I~~l~~~~~~~~------~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHR  173 (632)
                      ..+ +|+||+.+++++...+      .+|+||||+++++.+.+...  ....+++..++.++.||+.||+|||+++|+||
T Consensus        87 ~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr  165 (394)
T 4e7w_A           87 RIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR  165 (394)
T ss_dssp             HTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HhC-CCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCC
Confidence            444 7999999999986543      38899999999887766532  24689999999999999999999999999999


Q ss_pred             eeeCCeEEEe-cCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCC
Q 006772          174 NLKPSNLLLS-EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI  252 (632)
Q Consensus       174 DLKP~NILld-~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~  252 (632)
                      ||||+|||++ .++.+||+|||+++.....    .......||+.|+|||++.+.  ..++.++|||||||++|||++|+
T Consensus       166 Dlkp~Nill~~~~~~~kL~DFG~a~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          166 DIKPQNLLLDPPSGVLKLIDFGSAKILIAG----EPNVSYICSRYYRAPELIFGA--TNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             CCSGGGEEEETTTTEEEECCCTTCEECCTT----CCCCSSCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCHHHEEEcCCCCcEEEeeCCCcccccCC----CCCcccccCcCccCHHHHcCC--CCCCcHHHHHHHHHHHHHHHhCC
Confidence            9999999999 7999999999999875332    122345789999999998643  35889999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhccCC---------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHH
Q 006772          253 QPWFGKSVEEIYHSVVIKKEKP---------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADI  305 (632)
Q Consensus       253 ~PF~~~~~~ei~~~i~~~~~~p---------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~el  305 (632)
                      .||.+.+..+....+......+                           .++..+++++.+||.+||+.||.+||++.|+
T Consensus       240 ~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  319 (394)
T 4e7w_A          240 PLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA  319 (394)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHH
Confidence            9999988766555544321111                           1234588999999999999999999999998


Q ss_pred             HHHHHhhhhcccCCCCcc
Q 006772          306 LHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       306 l~~Le~~~~~~~~~~~w~  323 (632)
                      ++      +++|....|.
T Consensus       320 l~------hp~f~~~~~~  331 (394)
T 4e7w_A          320 LC------HPFFDELRTG  331 (394)
T ss_dssp             HT------SGGGSTTTSS
T ss_pred             hc------Chhhhhhccc
Confidence            86      7777766554

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.3e-40  Score=362.88  Aligned_cols=262  Identities=24%  Similarity=0.268  Sum_probs=202.8

Q ss_pred             ccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCC
Q 006772           28 TVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRES  107 (632)
Q Consensus        28 ~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h  107 (632)
                      +....+..........+|++.+.||+|+||.||+|.+..++      +.||||++......     ..++..++..+ +|
T Consensus        39 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~------~~vaiK~~~~~~~~-----~~~E~~il~~l-~h  106 (420)
T 1j1b_A           39 TVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG------ELVAIKKVLQDKRF-----KNRELQIMRKL-DH  106 (420)
T ss_dssp             EEEEEESSSSCCCEEEEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEECCTTS-----CCHHHHHHHTC-CC
T ss_pred             eeeccCCCCCCCcccceEEeeeEEeeCCCEEEEEEEECCCC------cEEEEEEecccchh-----HHHHHHHHHHc-CC
Confidence            33444333333334467999999999999999999997655      48999998654322     12233445554 79


Q ss_pred             CceeEeeEEEEEC------CEEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCe
Q 006772          108 QSVCWLHGISVIN------GKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSN  179 (632)
Q Consensus       108 ~~I~~l~~~~~~~------~~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~N  179 (632)
                      +||+.+++++...      ..+++||||+++++.+.+...  ....+++..++.++.||+.||+|||+++|+||||||+|
T Consensus       107 pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  186 (420)
T 1j1b_A          107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN  186 (420)
T ss_dssp             TTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGG
T ss_pred             CCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhh
Confidence            9999999887542      247799999999888777542  34689999999999999999999999999999999999


Q ss_pred             EEEecC-CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC
Q 006772          180 LLLSEH-DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK  258 (632)
Q Consensus       180 ILld~~-g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~  258 (632)
                      ||++.+ +.+||+|||+++.....    .......||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.
T Consensus       187 ILl~~~~~~~kl~DFG~a~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~G~~pf~~~  260 (420)
T 1j1b_A          187 LLLDPDTAVLKLCDFGSAKQLVRG----EPNVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGD  260 (420)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTT----CCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             EEEeCCCCeEEeccchhhhhcccC----CCceeeeeCCCcCCHHHHcCC--CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            999965 67899999999875332    122345789999999998643  25889999999999999999999999998


Q ss_pred             CHHHHHHHHHhhccC---------------CC------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          259 SVEEIYHSVVIKKEK---------------PC------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~---------------p~------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+.+..+......               ..            ++..+++++.+||.+||+.||.+||++.|+++
T Consensus       261 ~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          261 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             SHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            866555444321110               11            23467899999999999999999999999886

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.3e-40  Score=343.13  Aligned_cols=266  Identities=20%  Similarity=0.309  Sum_probs=207.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE-ECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV-ING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~-~~~  121 (632)
                      .+|++.+.||+|+||.||+|.+...+.   ....||+|.+.............++..++.++ +|+||+.+++++. .++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  100 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEG  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC--------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCC---ceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCC
Confidence            569999999999999999999765432   23469999997654433333333444555555 6999999999864 456


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..|+||||++| +|.+++.. ....+++.+++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             ceEEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence            88999999985 88777754 34578999999999999999999999999999999999999999999999999997653


Q ss_pred             CCCCC-CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          201 GRSLS-DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       201 ~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      ..... ........||+.|+|||++.+   ..++.++|+|||||++|||++ +.+||.+.+..+....+. .......|.
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  255 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPE  255 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-TTCCCCCCT
T ss_pred             ccchhccccccCCCCCccccChHHhcC---CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-cCCCCCCCc
Confidence            32211 112234467889999999864   368899999999999999999 677777766655554444 344555678


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhccc
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVY  317 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~  317 (632)
                      .+|+++.+++.+||+.||++||++.++++.|+.+...+.
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          256 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            899999999999999999999999999999998876543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.3e-41  Score=349.01  Aligned_cols=263  Identities=18%  Similarity=0.261  Sum_probs=202.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +..++|++.+.||+|+||.||+|.+..++      +.||||++.............++..++..+ .|+||+.+++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   78 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTG------DLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEE   78 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCC------cEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeec
Confidence            34578999999999999999999998765      489999997543222222233344555555 59999999999887


Q ss_pred             CC--EEEEEEecCC-CCHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE----ecCCcEEEE
Q 006772          120 NG--KICIAMKFYE-GSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL----SEHDQLVLG  191 (632)
Q Consensus       120 ~~--~l~LVmEy~~-GsL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl----d~~g~vkL~  191 (632)
                      .+  ..||||||++ |+|.+++..... ..+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEc
Confidence            54  7899999998 688887765432 349999999999999999999999999999999999999    777889999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCC-----CCCCCCcccccchhHHHHHHHHhCCCCCCCCC----HHH
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-----VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS----VEE  262 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-----~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~----~~e  262 (632)
                      |||+++.....    .......||+.|+|||++...     ....++.++|||||||++|||++|..||....    ..+
T Consensus       159 Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  234 (319)
T 4euu_A          159 DFGAARELEDD----EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE  234 (319)
T ss_dssp             CCTTCEECCTT----CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHH
T ss_pred             cCCCceecCCC----CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHH
Confidence            99999875432    222345799999999987521     12468899999999999999999999997532    234


Q ss_pred             HHHHHHhhccCC-----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          263 IYHSVVIKKEKP-----------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       263 i~~~i~~~~~~p-----------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +...+.......                       .++..+++.+.++|.+||+.||++||++.|+++...+..
T Consensus       235 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          235 VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             HHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            444444322110                       112234568899999999999999999999998765443

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.2e-40  Score=370.21  Aligned_cols=278  Identities=20%  Similarity=0.269  Sum_probs=218.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.++||+|+||.||+|.+..++      +.||||++.......  . +..+..++..+.+++++..+..++...+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~~~~--~-~~~E~~il~~L~~~~~i~~i~~~~~~~~   76 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTN------EEVAIKLENVKTKHP--Q-LLYESKIYRILQGGTGIPNVRWFGVEGD   76 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTC------CEEEEEEEETTCSSC--C-HHHHHHHHHHTTTSTTCCCEEEEEEETT
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCC------cEEEEEEeccccccH--H-HHHHHHHHHHhcCCCCCCeEEEEEeeCC
Confidence            478999999999999999999987665      489999986543221  1 2334456677778889988888889999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFGlak~  198 (632)
                      ..||||||+.|+|.+++... .+.+++.+++.++.||+.||+|||+++|+||||||+||||   +.++.+||+|||+++.
T Consensus        77 ~~~lvme~~g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~  155 (483)
T 3sv0_A           77 YNVLVMDLLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK  155 (483)
T ss_dssp             EEEEEEECCCCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             EEEEEEECCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence            99999999988999888653 4589999999999999999999999999999999999999   6889999999999987


Q ss_pred             ccCCCCCC----CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC---HHHHHHHHHhhc
Q 006772          199 LLGRSLSD----SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---VEEIYHSVVIKK  271 (632)
Q Consensus       199 ~~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~---~~ei~~~i~~~~  271 (632)
                      +.......    .......||+.|+|||++.+.   .++.++|||||||+||||++|..||.+..   ..+.+..+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~  232 (483)
T 3sv0_A          156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK  232 (483)
T ss_dssp             CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred             ccCCccccccccccccccCCCccccCHHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence            64432111    112356799999999999743   68899999999999999999999998754   333333333222


Q ss_pred             cCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh----cccCCCCccccccccccC
Q 006772          272 EKP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN----AVYNDGEWTGLGSRALTD  332 (632)
Q Consensus       272 ~~p---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~----~~~~~~~w~~~~~~~~~~  332 (632)
                      ...   .++..+|+++.+||.+||+.||++||++.+|++.|+.+..    .++...+|+.+.......
T Consensus       233 ~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~~~~~~  300 (483)
T 3sv0_A          233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQI  300 (483)
T ss_dssp             HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC-----
T ss_pred             ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhccccccc
Confidence            111   2236789999999999999999999999999998887754    345677888776554333

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.3e-40  Score=337.08  Aligned_cols=245  Identities=16%  Similarity=0.227  Sum_probs=199.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.....  .....+.+ +...+..+.+||||+.+++++..+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-e~~~~~~l~~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDG------CIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVRYFSAWAED   83 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCCTTSHHHHHHHH-HHHHHHHSCSCTTBCCEEEEEEET
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCC------ceEEEEEecccccccHHHHHHHH-HHHHHHHhCCCCCeeeeeeeeecC
Confidence            67999999999999999999987655      4899999976422  22233333 334455666899999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC------------
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH------------  185 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~------------  185 (632)
                      +..++||||++| +|.+++....  ...+++..++.++.||+.||+|||+++|+||||||+|||++.+            
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999985 8888887543  2679999999999999999999999999999999999999854            


Q ss_pred             -------CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC
Q 006772          186 -------DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK  258 (632)
Q Consensus       186 -------g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~  258 (632)
                             ..+||+|||++......       ....||+.|+|||++.+.  ..++.++|||||||++|||++|.+|+...
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~  234 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQEN--YTHLPKADIFALALTVVCAAGAEPLPRNG  234 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTC--CTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred             ccccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCC--CCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence                   47999999998865321       223589999999998743  24678999999999999999999887654


Q ss_pred             CHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..   ...+ .....+.+|..+++++.++|.+||+.||++||++.++++
T Consensus       235 ~~---~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          235 DQ---WHEI-RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HH---HHHH-HTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hH---HHHH-HcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            32   2222 234556778899999999999999999999999999886

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=8.3e-41  Score=357.09  Aligned_cols=257  Identities=19%  Similarity=0.252  Sum_probs=198.8

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc-------
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR-------  105 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~-------  105 (632)
                      +...+..+ .++|++.+.||+|+||.||+|++..++      +.||||++.... .....+.+ +..++..+.       
T Consensus        28 ~~~~g~~~-~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~-~~~~~~~~-E~~~l~~l~~~~~~~~   98 (397)
T 1wak_A           28 LVKIGDLF-NGRYHVIRKLGWGHFSTVWLSWDIQGK------KFVAMKVVKSAE-HYTETALD-EIRLLKSVRNSDPNDP   98 (397)
T ss_dssp             SSCTTCEE-TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSCH-HHHHHHHH-HHHHHHHHHHSCTTCG
T ss_pred             EEehhhhc-CCeEEEEEEeeecCCeeEEEEEecCCC------eEEEEEEEecCC-cchHHHHH-HHHHHHHHhhcCCCCC
Confidence            33334333 478999999999999999999987655      589999997542 22233333 334444443       


Q ss_pred             CCCceeEeeEEEE----ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeE
Q 006772          106 ESQSVCWLHGISV----INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNL  180 (632)
Q Consensus       106 ~h~~I~~l~~~~~----~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NI  180 (632)
                      .|+||+.+++++.    .+..+||||||+.|++++.+.......+++..++.++.||+.||+|||++ +|+||||||+||
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NI  178 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI  178 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGE
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHe
Confidence            2788999999887    34689999999999999999876657899999999999999999999999 999999999999


Q ss_pred             EEecCC-------------------------------------------------cEEEEecCCceeccCCCCCCCcccc
Q 006772          181 LLSEHD-------------------------------------------------QLVLGDFGIPYLLLGRSLSDSDMAL  211 (632)
Q Consensus       181 Lld~~g-------------------------------------------------~vkL~DFGlak~~~~~~~~~~~~~~  211 (632)
                      |++.++                                                 .+||+|||+++....      ....
T Consensus       179 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~------~~~~  252 (397)
T 1wak_A          179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTE  252 (397)
T ss_dssp             EECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB------CSCS
T ss_pred             eEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc------cCcc
Confidence            999775                                                 799999999986532      2234


Q ss_pred             ccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhhccC------------
Q 006772          212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV------EEIYHSVVIKKEK------------  273 (632)
Q Consensus       212 ~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~------~ei~~~i~~~~~~------------  273 (632)
                      ..||+.|+|||++.+.   .++.++|||||||+||||++|..||.+.+.      ......+......            
T Consensus       253 ~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  329 (397)
T 1wak_A          253 DIQTRQYRSLEVLIGS---GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS  329 (397)
T ss_dssp             CCSCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTG
T ss_pred             CCCCCcccCChhhcCC---CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccc
Confidence            5789999999999743   588999999999999999999999986542      1222222110000            


Q ss_pred             ----------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ----------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ----------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                  ...+...++++.+||.+||+.||++||++.|+++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          330 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                                        0122334567899999999999999999999886

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-40  Score=351.67  Aligned_cols=261  Identities=21%  Similarity=0.248  Sum_probs=202.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH----HHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~----~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++........    .....++..++..+ +|+||+.+++++
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   81 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTN------QIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAF   81 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCC------SEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCC------cEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEE
Confidence            478999999999999999999987655      4899999875322111    11122333445555 699999999999


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..++..++||||++|++.+.+.. ....+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        82 ~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           82 GHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eeCCceEEEEEcCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence            99999999999999988877754 34578999999999999999999999999999999999999999999999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--  275 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--  275 (632)
                      .....   .......+||+.|+|||++.+.  ..++.++|+|||||++|||++|.+||.+.+..+.+..+......+.  
T Consensus       161 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~  235 (346)
T 1ua2_A          161 SFGSP---NRAYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE  235 (346)
T ss_dssp             TTTSC---CCCCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             eccCC---cccCCcccccccccCchHhhCC--CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChh
Confidence            65322   1223345789999999998642  2478899999999999999999999999887777666654322111  


Q ss_pred             -C-----------------------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCC
Q 006772          276 -I-----------------------PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE  321 (632)
Q Consensus       276 -~-----------------------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~  321 (632)
                       .                       ...+++++.+||.+||+.||++|||+.|+++      ++++.+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------h~~f~~~~  299 (346)
T 1ua2_A          236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK------MKYFSNRP  299 (346)
T ss_dssp             TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT------SGGGTSSS
T ss_pred             hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc------ChhhhcCC
Confidence             0                       1456789999999999999999999999887      56665443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.2e-40  Score=360.02  Aligned_cols=267  Identities=19%  Similarity=0.278  Sum_probs=201.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.++.++      +.||||++.....  ...+.+. ++..++..+ +|+||+.+++++..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vAiK~~~~~~~~~~~~~~~~-~E~~~l~~l-~h~nIv~l~~~~~~   96 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTE------KNVAIKKVNRMFEDLIDCKRIL-REITILNRL-KSDYIIRLYDLIIP   96 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEECSTTTSHHHHHHHH-HHHHHHHHC-CCTTBCCEEEECCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCC------cEEEEEEeCchhcChHHHHHHH-HHHHHHHHc-CCCCcceEEEEEec
Confidence            478999999999999999999998765      4899999976422  2223333 334555555 69999999999876


Q ss_pred             C-----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          120 N-----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       120 ~-----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      .     +.+||||||++|+|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFG  174 (432)
T 3n9x_A           97 DDLLKFDELYIVLEIADSDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFG  174 (432)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             CCCCcCCeEEEEEecCCcCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCC
Confidence            5     57999999999999988854  3579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCC-------------------CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC----
Q 006772          195 IPYLLLGRSLS-------------------DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG----  251 (632)
Q Consensus       195 lak~~~~~~~~-------------------~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG----  251 (632)
                      +++........                   .......+||+.|+|||++..  ...++.++|||||||++|||++|    
T Consensus       175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL--QENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             TCEEC-------------------------------CCCCCTTCCHHHHTT--CSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc--CCCCCcccccchHHHHHHHHHhccccc
Confidence            99876432111                   012355689999999998743  23689999999999999999984    


Q ss_pred             -------CCCCCCCCH-----------------HHHHHHHHh------------------------hccCCCC-----CC
Q 006772          252 -------IQPWFGKSV-----------------EEIYHSVVI------------------------KKEKPCI-----PS  278 (632)
Q Consensus       252 -------~~PF~~~~~-----------------~ei~~~i~~------------------------~~~~p~~-----p~  278 (632)
                             .++|.+.+.                 .+....+..                        .......     .+
T Consensus       253 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (432)
T 3n9x_A          253 INDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYP  332 (432)
T ss_dssp             CSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHST
T ss_pred             ccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCC
Confidence                   444444321                 111111110                        0001111     14


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccc
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLG  326 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~  326 (632)
                      .+++++.+||.+||+.||++|||+.|+++      ++++....|....
T Consensus       333 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~------Hp~f~~~~~~~~e  374 (432)
T 3n9x_A          333 SISDDGINLLESMLKFNPNKRITIDQALD------HPYLKDVRKKKLE  374 (432)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHT------CGGGTTTCCTTTC
T ss_pred             CCCHHHHHHHHHHhcCCcccCCCHHHHhc------ChhhhhccCcccC
Confidence            68999999999999999999999999886      7888877776544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3e-40  Score=338.43  Aligned_cols=251  Identities=19%  Similarity=0.301  Sum_probs=208.8

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++      ..||||++.+....  .....+.++..++..+ +|+||+.+++
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~   81 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNK------FIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYN   81 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             cchhhhhceeeheecCCCCeEEEEEEEcCCC------cEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEE
Confidence            3456689999999999999999999987655      48999998643211  1122233344455555 6999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++..|+||||++| +|.+.+...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg  159 (284)
T 2vgo_A           82 YFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG  159 (284)
T ss_dssp             EEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred             EEEcCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEeccc
Confidence            99999999999999985 888888654  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++......     ......||+.|+|||++.+.   .++.++|+||||+++|+|++|..||...+..+....+.  ....
T Consensus       160 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~  229 (284)
T 2vgo_A          160 WSVHAPSL-----RRRTMCGTLDYLPPEMIEGK---THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDL  229 (284)
T ss_dssp             TCEECSSS-----CBCCCCSCGGGCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCC
T ss_pred             ccccCccc-----ccccccCCCCcCCHHHhccC---CCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh--cccc
Confidence            98764321     22345789999999998743   57889999999999999999999999988777766655  3455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+|..++.++.++|.+||+.||.+||++.++++
T Consensus       230 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          230 KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            678889999999999999999999999999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=8.3e-41  Score=353.79  Aligned_cols=263  Identities=16%  Similarity=0.210  Sum_probs=195.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHH--HHHH--------HHHHhhhccCCCc
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV--FVNK--------FEELFPKFRESQS  109 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~--~~~~--------~~~il~~l~~h~~  109 (632)
                      +..++|++.+.||+|+||.||+|.+...+   .....||||++.........+  +.++        +...+ ....|+|
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~-~~l~h~n  109 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKP---EKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIER-KQLDYLG  109 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSC---GGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHH-HTCSCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCC---CccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhh-ccccccC
Confidence            44578999999999999999999987632   233589999987653321111  1111        11112 3347999


Q ss_pred             eeEeeEEEEE----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC
Q 006772          110 VCWLHGISVI----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH  185 (632)
Q Consensus       110 I~~l~~~~~~----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~  185 (632)
                      |+.+++++..    +...||||||+.|+|.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++.+
T Consensus       110 i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  187 (345)
T 2v62_A          110 IPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK  187 (345)
T ss_dssp             CCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS
T ss_pred             cceeecccccccCCCcEEEEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC
Confidence            9999999988    7889999999977888877543  389999999999999999999999999999999999999988


Q ss_pred             C--cEEEEecCCceeccCCCC----CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-
Q 006772          186 D--QLVLGDFGIPYLLLGRSL----SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-  258 (632)
Q Consensus       186 g--~vkL~DFGlak~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-  258 (632)
                      +  .+||+|||+++.+.....    .........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+. 
T Consensus       188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~pf~~~~  264 (345)
T 2v62_A          188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV---ALSRRSDVEILGYCMLRWLCGKLPWEQNL  264 (345)
T ss_dssp             STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred             CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            7  999999999987633211    11122445799999999998743   6899999999999999999999999653 


Q ss_pred             -CHHHHHHHHHhhccCCCCC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          259 -SVEEIYHSVVIKKEKPCIP---------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       259 -~~~ei~~~i~~~~~~p~~p---------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                       +.........  .....+|         ..+|+++.++|.+||+.||++||++.+|++.|+.+.
T Consensus       265 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          265 KDPVAVQTAKT--NLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             TCHHHHHHHHH--HHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             cccHHHHHHHH--hhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence             3322221111  1111122         278999999999999999999999999999887543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.9e-41  Score=352.83  Aligned_cols=256  Identities=22%  Similarity=0.288  Sum_probs=200.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-----hhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-----EDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-----~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|++.+..     ......+ .++..++..+ +||||+.+++++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~-~~E~~~l~~l-~hpniv~~~~~~   97 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTR------AIRAIKIMNKNKIRQINPKDVERI-KTEVRLMKKL-HHPNIARLYEVY   97 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHC---CHHHHH-HHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCC------ceEEEeehhhhhhcccCHHHHHHH-HHHHHHHHhC-CCCCcceeehhh
Confidence            77999999999999999999987665      489999986431     1222333 3344555555 699999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc--------------------------------------CCCCCHHHHHHHHHHH
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR--------------------------------------GGKLPLPDILRYGIQL  158 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~--------------------------------------~~~l~~~~~~~ia~qI  158 (632)
                      ..++..||||||++ |+|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            99999999999997 57777663110                                      1124677888999999


Q ss_pred             HHHHHHHHhCCceeeeeeCCeEEEecCC--cEEEEecCCceeccCCCCC-CCccccccCCCccCCccccCCCCCCCCCcc
Q 006772          159 AKGISDLHSIGLLVLNLKPSNLLLSEHD--QLVLGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRGPISFE  235 (632)
Q Consensus       159 a~gL~yLHs~~IvHRDLKP~NILld~~g--~vkL~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g~~t~k  235 (632)
                      +.||+|||+++|+||||||+|||++.++  .+||+|||+++........ ........||+.|+|||++.+. ...++.+
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~  256 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT-NESYGPK  256 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS-SSCCCTH
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC-CCCCCcH
Confidence            9999999999999999999999998776  8999999999865332111 1123445799999999998643 3468899


Q ss_pred             cccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          236 TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       236 sDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +|||||||++|||++|..||.+.+..+....+.........+  ..+++++.+||.+||+.||.+||++.++++
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            999999999999999999999988887777766544333322  348999999999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.2e-40  Score=353.59  Aligned_cols=251  Identities=21%  Similarity=0.353  Sum_probs=202.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+..++      ..||+|++.............++..++..+ +|+||+.+++++.
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  101 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFY  101 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCC------cEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEE
Confidence            456689999999999999999999988665      489999997654333333344444555555 7999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .++..||||||++| +|.+++...  +.+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          102 SDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  179 (360)
T ss_dssp             ETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             ECCEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCC
Confidence            99999999999985 888887654  4799999999999999999999996 9999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH-----------
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH-----------  265 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~-----------  265 (632)
                      +.....     ......||+.|+|||++.+   ..++.++|||||||++|||++|..||...+..++..           
T Consensus       180 ~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  251 (360)
T 3eqc_A          180 GQLIDS-----MANSFVGTRSYMSPERLQG---THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA  251 (360)
T ss_dssp             HHHHHH-----C----CCCCTTCCHHHHTT---CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------
T ss_pred             cccccc-----cccCCCCCCCeECHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCC
Confidence            654221     2234578999999999974   368899999999999999999999998876544322           


Q ss_pred             -------------------------------HHHhhccCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          266 -------------------------------SVVIKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       266 -------------------------------~i~~~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                     .+.. ...+..+ ..++.++.+||.+||+.||++|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          252 ETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ----------------------CCCHHHHHHHHHH-SCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCCCcccCCCcccccccCCCCcccchhhhhHHhc-cCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                                           1111 1222222 457999999999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.1e-40  Score=342.23  Aligned_cols=260  Identities=22%  Similarity=0.389  Sum_probs=199.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ...++|++.+.||+|+||.||+|.+..++      +.||||++......  .....+.++..++..+ +||||+.+++++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~  103 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRE------RIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFG  103 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTT------EEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCC------eEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEE
Confidence            34579999999999999999999987655      48999998754322  1122233344455555 789999999999


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..++..|+||||++| +|.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~  181 (309)
T 2h34_A          104 EIDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA  181 (309)
T ss_dssp             EETTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred             eeCCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccC
Confidence            999999999999985 888877654  47999999999999999999999999999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-CC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-PC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-p~  275 (632)
                      ........  .......||+.|+|||++.+   ..++.++|+||||+++|||++|..||.+.+...+...+...... ..
T Consensus       182 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (309)
T 2h34_A          182 SATTDEKL--TQLGNTVGTLYYMAPERFSE---SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPST  256 (309)
T ss_dssp             -----------------CCGGGCCGGGTCC-------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGG
T ss_pred             cccccccc--ccccccCCCcCccCHHHHcC---CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccc
Confidence            76533211  12234578999999999874   36788999999999999999999999987765444333321111 23


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRP-LMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RP-s~~ell~~Le~~~  313 (632)
                      .+..+|+++.++|.+||+.||++|| ++.++++.|+...
T Consensus       257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            4578999999999999999999999 9999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=4.3e-40  Score=347.34  Aligned_cols=263  Identities=19%  Similarity=0.283  Sum_probs=205.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC-
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN-  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~-  120 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.............++..++..+ +|+||+.+++++..+ 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   82 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTG------EIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDS   82 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCC------cEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccc
Confidence            378999999999999999999987655      489999997644333232233344555555 699999999987654 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          121 ----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       121 ----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                          +..|+||||+.|+|.+.+..   +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (353)
T 2b9h_A           83 FENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA  159 (353)
T ss_dssp             STTCCCEEEEECCCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cCccceEEEEEeccCccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence                67999999999998888765   47999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCC-------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 006772          197 YLLLGRSLSD-------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       197 k~~~~~~~~~-------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~  269 (632)
                      +.........       .......||+.|+|||++..  ...++.++|+|||||++|||++|..||.+.+..+....+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  237 (353)
T 2b9h_A          160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT--SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG  237 (353)
T ss_dssp             EECC----------------CCCCCCGGGCCHHHHHS--CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccccccCccccccchhhccccccccCCeeecc--CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            8764321111       11233578999999998753  24688999999999999999999999999886654443332


Q ss_pred             hccCC----------------------C--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          270 KKEKP----------------------C--------IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       270 ~~~~p----------------------~--------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                      ....+                      .        .+..+++++.+||.+||+.||++||++.++++      ++++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~  311 (353)
T 2b9h_A          238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE------HPYLQT  311 (353)
T ss_dssp             HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTT
T ss_pred             HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc------Cccccc
Confidence            11111                      0        11468899999999999999999999999886      666655


Q ss_pred             CCc
Q 006772          320 GEW  322 (632)
Q Consensus       320 ~~w  322 (632)
                      ..+
T Consensus       312 ~~~  314 (353)
T 2b9h_A          312 YHD  314 (353)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            443

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=9.4e-41  Score=347.65  Aligned_cols=252  Identities=22%  Similarity=0.288  Sum_probs=191.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||||++.............++..++..+ +||||+.+++++.... 
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDD------CNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTC------CEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCS
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCC------cEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEecc
Confidence            57999999999999999999988665      489999997544433334444455566666 6999999999886543 


Q ss_pred             --------------------------------------------------------EEEEEEecCCC-CHHHHHHHhcC-
Q 006772          122 --------------------------------------------------------KICIAMKFYEG-SVGDRIAQQRG-  143 (632)
Q Consensus       122 --------------------------------------------------------~l~LVmEy~~G-sL~d~l~~~~~-  143 (632)
                                                                              .+++||||++| +|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    38999999985 78887765422 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCC---------CCccccccC
Q 006772          144 GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLS---------DSDMALRLG  214 (632)
Q Consensus       144 ~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~---------~~~~~~~~G  214 (632)
                      ...++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........         ........|
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            34566678999999999999999999999999999999999999999999999876433111         012234579


Q ss_pred             CCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 006772          215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEY  294 (632)
Q Consensus       215 T~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~  294 (632)
                      |+.|+|||++.+.   .++.++|+|||||++|||++|..|+..  ..+....+. ....+..+...++++.++|.+||+.
T Consensus       239 t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~  312 (332)
T 3qd2_B          239 TKLYMSPEQIHGN---NYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSP  312 (332)
T ss_dssp             CGGGSCHHHHHCC---CCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCS
T ss_pred             CcCccChHHhcCC---CCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhh-ccCCCcccccCChhHHHHHHHHccC
Confidence            9999999999743   688999999999999999998776522  111222211 1122222245678899999999999


Q ss_pred             CcCCCCCHHHHHH
Q 006772          295 DLRNRPLMADILH  307 (632)
Q Consensus       295 DP~~RPs~~ell~  307 (632)
                      ||++||++.++++
T Consensus       313 ~p~~Rps~~~~l~  325 (332)
T 3qd2_B          313 SPTERPEATDIIE  325 (332)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CCCcCCCHHHHhh
Confidence            9999999999887

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.8e-40  Score=335.32  Aligned_cols=245  Identities=22%  Similarity=0.315  Sum_probs=205.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|++.+........+.+ +..++..+ +|+||+.+++++..++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~-E~~~l~~l-~h~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTR------IRRAAKKIPKYFVEDVDRFKQ-EIEIMKSL-DHPNIIRLYETFEDNTD   80 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCSCHHHHHH-HHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCC------cEEEEEeehhhccchHHHHHH-HHHHHHhC-CCCCEeeEEEEEecCCe
Confidence            57999999999999999999987665      489999987644333344444 33455555 79999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecCCcee
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFGlak~  198 (632)
                      .|+||||++ |+|.+.+...  +.+++.+++.++.|++.||+|||+++|+||||||+|||+   +.++.+||+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            999999998 4787877654  479999999999999999999999999999999999999   7889999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC-
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP-  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p-  277 (632)
                      ....    .......||+.|+|||++.+    .++.++|+|||||++|||++|..||.+.+..+....+...  ...+| 
T Consensus       159 ~~~~----~~~~~~~~t~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~  228 (277)
T 3f3z_A          159 FKPG----KMMRTKVGTPYYVSPQVLEG----LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG--TFTFPE  228 (277)
T ss_dssp             CCTT----SCBCCCCSCTTTCCHHHHTT----CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCH
T ss_pred             ccCc----cchhccCCCCCccChHHhcc----cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCc
Confidence            5432    22234578999999999853    4788999999999999999999999998888777666533  33333 


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 ---SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ---~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                         ..+++++.++|.+||+.||++||++.++++
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          229 KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               278999999999999999999999999885

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=9.9e-40  Score=338.79  Aligned_cols=262  Identities=19%  Similarity=0.378  Sum_probs=197.9

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||||++....  .........++..++..+ +|+||+.+++++.
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~  102 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDG------VPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFI  102 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTC------CEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCC------ceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE
Confidence            4568999999999999999999987655      489999997532  122222233333445555 6999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .++..++||||++| +|.+++...  ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~  182 (310)
T 2wqm_A          103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL  182 (310)
T ss_dssp             ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred             cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence            99999999999985 888877653  246799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhccC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--VEEIYHSVVIKKEK  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--~~ei~~~i~~~~~~  273 (632)
                      ++......   .......||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+..  ..+....+......
T Consensus       183 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  256 (310)
T 2wqm_A          183 GRFFSSKT---TAAHSLVGTPYYMSPERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP  256 (310)
T ss_dssp             -------------------CCSSCCHHHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC
T ss_pred             eeeecCCC---ccccccCCCeeEeChHHhCC---CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC
Confidence            87653321   12234568999999999874   368899999999999999999999998753  33444444433333


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +..+..+++++.++|.+||+.||++||++.++++.|+.+...
T Consensus       257 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          257 PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            333467899999999999999999999999999999887643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.7e-40  Score=367.15  Aligned_cols=247  Identities=21%  Similarity=0.230  Sum_probs=194.4

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.+..  ......+.+ +..++..+ +|+||+.+++++..
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vAiK~~~~~~~~~~~~~~~~~-E~~~l~~l-~hpnIv~l~~~~~~  132 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLD------RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV-NHKNIISLLNVFTP  132 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTT------EEEEEEEEESGGGSHHHHHHHHH-HHHHHHHC-CCTTBCCCSEEECS
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCC------CEEEEEEECccccChHHHHHHHH-HHHHHHhC-CCCCCCcEEEEEcc
Confidence            478999999999999999999988765      489999997542  222233333 33444554 79999999999865


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .      ..+||||||++|++.+.+.    ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus       133 ~~~~~~~~~~~lv~E~~~~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DF  208 (464)
T 3ttj_A          133 QKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  208 (464)
T ss_dssp             CCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             CCccccCCeEEEEEeCCCCCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEE
Confidence            4      4689999999998887763    35899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++.....    ......+||+.|+|||++.+.   .|+.++|||||||++|||++|+.||.+.+..+.+..+......
T Consensus       209 G~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~  281 (464)
T 3ttj_A          209 GLARTAGTS----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  281 (464)
T ss_dssp             CCC-----C----CCC----CCCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             EeeeecCCC----cccCCCcccccccCHHHHcCC---CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            999865321    223456899999999999753   6889999999999999999999999998877666655432211


Q ss_pred             C--------------------CC---------CCC-----------CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 P--------------------CI---------PSG-----------LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p--------------------~~---------p~~-----------lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +                    .+         |..           .++++.+||.+||+.||++|||++|+++
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1                    00         000           1567999999999999999999999886

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.3e-40  Score=348.83  Aligned_cols=278  Identities=22%  Similarity=0.315  Sum_probs=214.2

Q ss_pred             ccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc
Q 006772           30 VATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS  109 (632)
Q Consensus        30 ~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~  109 (632)
                      .++....-..+..++|++.+.||+|+||.||+|.+..... ...++.||||++.............++..++..+ .|+|
T Consensus        17 ~sss~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~   94 (327)
T 2yfx_A           17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPN-DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQN   94 (327)
T ss_dssp             EEECGGGSCBCCGGGCEEEEECC--CSSCEEEEEC---------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTT
T ss_pred             CccchhhcccCChhheEEEEEEcCCCCeeEEEEEEcCCCC-CCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCC
Confidence            3334444456778999999999999999999998543211 1234689999997543332232233344555555 7999


Q ss_pred             eeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          110 VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG-----GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       110 I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~-----~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                      |+.+++++..++..||||||++ |+|.+++.....     ..+++.+++.++.||+.||.|||+++|+||||||+|||++
T Consensus        95 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~  174 (327)
T 2yfx_A           95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT  174 (327)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred             CCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEe
Confidence            9999999999899999999996 588888876532     4589999999999999999999999999999999999999


Q ss_pred             c---CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCC
Q 006772          184 E---HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS  259 (632)
Q Consensus       184 ~---~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~  259 (632)
                      .   +..+||+|||+++........ .......||+.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+
T Consensus       175 ~~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~  250 (327)
T 2yfx_A          175 CPGPGRVAKIGDFGMARDIYRASYY-RKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  250 (327)
T ss_dssp             CSSTTCCEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cCCCcceEEECcccccccccccccc-ccCCCcCCCcceeCHhHhcC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence            4   446999999998754332211 12233467999999999864   368899999999999999998 999999988


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+....+.. ...+..+..+++.+.++|.+||+.||.+||++.++++.|+.+..
T Consensus       251 ~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          251 NQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            8777666553 44556678899999999999999999999999999999887654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=5e-40  Score=352.85  Aligned_cols=256  Identities=19%  Similarity=0.312  Sum_probs=203.0

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCC-----ceeEeeEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ-----SVCWLHGI  116 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~-----~I~~l~~~  116 (632)
                      .++|++.+.||+|+||+||+|.+..++      +.||||+++.... .... ...+..++..+.+|+     +++.+.++
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~-~~~~-~~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQ------EWVAIKIIKNKKA-FLNQ-AQIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEECSSHH-HHHH-HHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCC------cEEEEEEEeccHH-HHHH-HHHHHHHHHHHHhcccccceeEEEeeee
Confidence            478999999999999999999987655      4899999975322 1222 223334445554555     48899999


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCceeeeeeCCeEEEe--cCCcEEEEe
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS--IGLLVLNLKPSNLLLS--EHDQLVLGD  192 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs--~~IvHRDLKP~NILld--~~g~vkL~D  192 (632)
                      +...+.+||||||+.|+|.+++.....+.+++..++.++.||+.||.|||+  .+|+||||||+|||++  .++.+||+|
T Consensus       125 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          125 FMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             EEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             eccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence            999999999999999999999987655679999999999999999999994  6899999999999995  478899999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++....      ......||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+....+.....
T Consensus       205 FG~a~~~~~------~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~  275 (382)
T 2vx3_A          205 FGSSCQLGQ------RIYQYIQSRFYRSPEVLLGM---PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG  275 (382)
T ss_dssp             CTTCEETTC------CCCSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             ccCceeccc------ccccccCCccccChHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            999987532      22345789999999999743   688999999999999999999999999887776665553211


Q ss_pred             CCC----------------CC------------------CC----------------------------CCHHHHHHHHH
Q 006772          273 KPC----------------IP------------------SG----------------------------LPPAVENVIIG  290 (632)
Q Consensus       273 ~p~----------------~p------------------~~----------------------------lp~~l~~LI~~  290 (632)
                      .+.                +|                  ..                            .++++.+||.+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  355 (382)
T 2vx3_A          276 IPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILR  355 (382)
T ss_dssp             SCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHH
Confidence            110                00                  00                            01478999999


Q ss_pred             hhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          291 CFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       291 cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                      ||+.||++|||+.|+++      ++++...
T Consensus       356 mL~~dP~~Rpta~e~L~------hp~f~~~  379 (382)
T 2vx3_A          356 MLDYDPKTRIQPYYALQ------HSFFKKT  379 (382)
T ss_dssp             HTCSCTTTSCCHHHHTT------SGGGCC-
T ss_pred             hcCCChhhCCCHHHHhc------CcccccC
Confidence            99999999999999876      6666543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=4.8e-40  Score=343.92  Aligned_cols=259  Identities=19%  Similarity=0.300  Sum_probs=211.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++......      ....+. ++..++..+ .||||+.++++
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~-~E~~~l~~l-~h~~iv~~~~~   83 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTG------LEYAAKFIKKRQSRASRRGVSREEIE-REVSILRQV-LHHNVITLHDV   83 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEBCSSSSCSSSBCHHHHH-HHHHHHHHC-CCTTBCCEEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCC------eEEEEEEEecccccccccchhHHHHH-HHHHHHHhC-CCCCcceEEEE
Confidence            67999999999999999999987655      48999999764321      123333 333455555 68999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC----cEEEE
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLG  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g----~vkL~  191 (632)
                      +..++..|+||||++ |+|.+++..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++    .+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~  161 (321)
T 2a2a_A           84 YENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (321)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EecCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence            999999999999997 588887754  35799999999999999999999999999999999999999888    79999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++.....    .......||+.|+|||++.+   ..++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus       162 Dfg~~~~~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  234 (321)
T 2a2a_A          162 DFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVS  234 (321)
T ss_dssp             CCTTCEECCTT----CCCCCCCSCGGGCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC
T ss_pred             cCccceecCcc----ccccccCCCCCccCcccccC---CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence            99999865432    12234578999999999874   368899999999999999999999999988877776665322


Q ss_pred             cCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccc
Q 006772          272 EKP--CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTG  324 (632)
Q Consensus       272 ~~p--~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~  324 (632)
                      ...  .++..+++.+.++|.+||+.||++||++.++++      ++++...+|..
T Consensus       235 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~------hp~~~~~~~~~  283 (321)
T 2a2a_A          235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR------HPWITPVDNQQ  283 (321)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH------STTTSCSSHHH
T ss_pred             cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc------CccccCCCccc
Confidence            111  122578999999999999999999999999887      66676665543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=7.1e-40  Score=337.35  Aligned_cols=250  Identities=23%  Similarity=0.362  Sum_probs=207.6

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|++....  .....+...++..++..+ .|+||+.+++++.
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   85 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTK------EVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFE   85 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCC------ceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeec
Confidence            3468999999999999999999987665      489999986532  122223333344455555 7999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..++||||++ ++|.+++...  +.+++.+++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  163 (294)
T 2rku_A           86 DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  163 (294)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCce
Confidence            9999999999998 5777766543  479999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......   .......||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.+....+....+.  .....+|
T Consensus       164 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~  235 (294)
T 2rku_A          164 KVEYDG---ERKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIP  235 (294)
T ss_dssp             ECCSTT---CCBCCCCSCCSSCCHHHHTTS---CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCC
T ss_pred             ecccCc---cccccccCCCCcCCcchhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--hccCCCc
Confidence            753221   122345789999999998743   57889999999999999999999999988777666554  3455678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+++++.++|.+||+.||++||++.++++
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          236 KHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            899999999999999999999999999886

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-40  Score=366.82  Aligned_cols=253  Identities=23%  Similarity=0.337  Sum_probs=209.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||||++.+....  .....+.++..++..+ +||||+.+++
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g------~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~   83 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTG------HKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQ   83 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTC------CEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence            3455689999999999999999999988665      48999999653211  1112233333444444 6999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++...+.+||||||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        84 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG  161 (476)
T 2y94_A           84 VISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG  161 (476)
T ss_dssp             EEECSSEEEEEEECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             EEEECCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEecc
Confidence            9999999999999997 578887753  4579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....    ......+||+.|+|||++.+..  ..+.++|||||||++|||++|..||.+.+..+++..+..  ...
T Consensus       162 ~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~~~  233 (476)
T 2y94_A          162 LSNMMSDG----EFLRTSCGSPNYAAPEVISGRL--YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD--GIF  233 (476)
T ss_dssp             SCEECCTT----CCBCCCCSCSTTCCHHHHTTCC--BCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT--TCC
T ss_pred             chhhcccc----ccccccCCCcCeEChhhccCCC--CCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc--CCc
Confidence            99875332    2234568999999999997541  236899999999999999999999999887777777653  345


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..|..+++++.+||.+||+.||.+||++.++++
T Consensus       234 ~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          234 YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            567889999999999999999999999999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-40  Score=339.74  Aligned_cols=249  Identities=22%  Similarity=0.324  Sum_probs=180.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh--HHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC--AKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+.....  ......++..++..+ +||||+.+++++..+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   83 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTG------LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDS   83 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECS
T ss_pred             ccceeeeeecCCCceEEEEEEEccCC------ceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccC
Confidence            58999999999999999999987655      489999986432111  112233333444554 689999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          121 GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       121 ~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      +..|+||||++| +|.+++.. ....+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++...
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           84 NYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             SEEEEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CeEEEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            999999999985 66666653 3467999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ....   .......||+.|+|||++.+.   .++.++|+|||||++|||++|..||...+..+....+.  ......|..
T Consensus       163 ~~~~---~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~  234 (278)
T 3cok_A          163 KMPH---EKHYTLCGTPNYISPEIATRS---AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--LADYEMPSF  234 (278)
T ss_dssp             C----------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC--SSCCCCCTT
T ss_pred             cCCC---CcceeccCCCCcCCcchhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh--hcccCCccc
Confidence            3221   122345789999999998743   57889999999999999999999998876554443332  233456778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++.++.++|.+||+.||++||++.++++
T Consensus       235 ~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          235 LSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            9999999999999999999999999886

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1e-39  Score=349.09  Aligned_cols=253  Identities=21%  Similarity=0.286  Sum_probs=207.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch----hhH---HHHHHHHHHHhhhccCCCceeEeeE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE----DCA---KVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~----~~~---~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||||++.....    ...   ......+..++..+..||||+.+++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  167 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATG------HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID  167 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECCCC------cEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            46999999999999999999987655      4899999875431    111   2223344455666668999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++...+..|+||||++| +|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG  245 (365)
T 2y7j_A          168 SYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG  245 (365)
T ss_dssp             EEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecC
Confidence            99999999999999985 888877653  479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCC---CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      ++..+...    ......+||+.|+|||++.+.   ....++.++|||||||++|||++|..||.+.+..+....+....
T Consensus       246 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~  321 (365)
T 2y7j_A          246 FSCHLEPG----EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ  321 (365)
T ss_dssp             TCEECCTT----CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             cccccCCC----cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            99875432    223446799999999998632   12357889999999999999999999999988777776665433


Q ss_pred             cCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .....|  ..+++++.++|.+||+.||++||++.++++
T Consensus       322 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          322 YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            332222  578899999999999999999999999887

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.7e-40  Score=341.71  Aligned_cols=268  Identities=20%  Similarity=0.332  Sum_probs=205.5

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..++.++|++.+.||+|+||.||+|.+....   .....||+|+++...  ......+.+ +..++..+ +||||+.+++
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~-e~~~l~~l-~h~~iv~~~~  103 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQED---GTSLKVAVKTMKLDNSSQREIEEFLS-EAACMKDF-SHPNVIRLLG  103 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTT---SCEEEEEEEEC---CCCHHHHHHHHH-HHHHHHTC-CCTTBCCCCE
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccC---CceeEEEEEEEeccccchhHHHHHHH-HHHHHhcC-CCCCeeeeeE
Confidence            3467789999999999999999999886543   234589999987543  222233333 33445555 6999999999


Q ss_pred             EEEECC-----EEEEEEecCC-CCHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC
Q 006772          116 ISVING-----KICIAMKFYE-GSVGDRIAQQ----RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH  185 (632)
Q Consensus       116 ~~~~~~-----~l~LVmEy~~-GsL~d~l~~~----~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~  185 (632)
                      ++...+     ..++||||++ |+|.+++...    ....+++..++.++.||+.||.|||+++|+||||||+|||++.+
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~  183 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD  183 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            987654     3599999998 5888877543    23579999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHH
Q 006772          186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY  264 (632)
Q Consensus       186 g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~  264 (632)
                      +.+||+|||+++........ .......+++.|+|||++.+   ..++.++|+|||||++|||++ |..||.+.+..+..
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  259 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYY-RQGRIAKMPVKWIAIESLAD---RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY  259 (313)
T ss_dssp             SCEEECSCSCC-----------------CCGGGSCHHHHHS---SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred             CcEEEeecCcceeccccccc-CcccccCCCccccCchhhcC---CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH
Confidence            99999999999765332111 11223457889999999974   368899999999999999999 99999988877766


Q ss_pred             HHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       265 ~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ..+.. ...+..+..+++++.++|.+||+.||.+||++.++++.|+.+...
T Consensus       260 ~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          260 DYLLH-GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             HHHHT-TCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHc-CCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            65543 445667889999999999999999999999999999999887643

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4e-40  Score=350.12  Aligned_cols=246  Identities=20%  Similarity=0.309  Sum_probs=189.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.....   .....++..++..+ .|+||+.+++++..++.
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~  122 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQ------KPYALKVLKKTVD---KKIVRTEIGVLLRL-SHPNIIKLKEIFETPTE  122 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEC-------------CHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCC------cEEEEEEeccchh---HHHHHHHHHHHHhC-CCCCCcceeeeEecCCe
Confidence            56999999999999999999987655      4899999975432   22233333445555 68999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEecCCcee
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGDFGIPYL  198 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~DFGlak~  198 (632)
                      .++||||++ |+|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.   ++.+||+|||+++.
T Consensus       123 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~  200 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI  200 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred             EEEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence            999999998 588887754  357999999999999999999999999999999999999975   88999999999876


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhhccCC--C
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-IYHSVVIKKEKP--C  275 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e-i~~~i~~~~~~p--~  275 (632)
                      ....    ......+||+.|+|||++.+   ..++.++|||||||++|||++|..||.+....+ ++..+.......  .
T Consensus       201 ~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~  273 (349)
T 2w4o_A          201 VEHQ----VLMKTVCGTPGYCAPEILRG---CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP  273 (349)
T ss_dssp             ----------------CGGGSCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTT
T ss_pred             cCcc----cccccccCCCCccCHHHhcC---CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCc
Confidence            5322    12234579999999999974   368899999999999999999999998766544 455554322221  2


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....++.++.+||.+||+.||++||++.++++
T Consensus       274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            23578999999999999999999999999887

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=5.8e-40  Score=342.17  Aligned_cols=250  Identities=20%  Similarity=0.254  Sum_probs=197.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc-----CCCceeEeeEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR-----ESQSVCWLHGI  116 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~-----~h~~I~~l~~~  116 (632)
                      .++|++.+.||+|+||.||+|.+....     ++.||||+++.... ....+ ..+..++..+.     .+++++.++++
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~vavK~~~~~~~-~~~~~-~~e~~~l~~l~~~~~~~~~~i~~~~~~   85 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAG-----GRHVAVKIVKNVDR-YCEAA-RSEIQVLEHLNTTDPNSTFRCVQMLEW   85 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTT-----TEEEEEEEECSSHH-HHHHH-HHHHHHHHHHHHHCTTCTTCBCCEEEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCC-----CcEEEEEEEecCCc-hhHHH-HHHHHHHHHhhhcCCCCceeeEeeecc
Confidence            478999999999999999999985422     25899999975432 22222 22333333332     34578999999


Q ss_pred             EEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec------------
Q 006772          117 SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE------------  184 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~------------  184 (632)
                      +..++..||||||+.|+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.            
T Consensus        86 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~  165 (339)
T 1z57_A           86 FEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK  165 (339)
T ss_dssp             EEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred             cccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence            99999999999999999999998765567999999999999999999999999999999999999987            


Q ss_pred             -------CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC
Q 006772          185 -------HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG  257 (632)
Q Consensus       185 -------~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~  257 (632)
                             ++.+||+|||+++....      ......||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+
T Consensus       166 ~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          166 RDERTLINPDIKVVDFGSATYDDE------HHSTLVSTRHYRAPEVILAL---GWSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             CEEEEESCCCEEECCCSSCEETTS------CCCSSCSCGGGCCHHHHTTS---CCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccCCCceEeeCcccccCcc------ccccccCCccccChHHhhCC---CCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                   66899999999976422      22345789999999999743   688999999999999999999999998


Q ss_pred             CCHHHHHHHHHhhccCC------------------------------------------CCCCCCCHHHHHHHHHhhhcC
Q 006772          258 KSVEEIYHSVVIKKEKP------------------------------------------CIPSGLPPAVENVIIGCFEYD  295 (632)
Q Consensus       258 ~~~~ei~~~i~~~~~~p------------------------------------------~~p~~lp~~l~~LI~~cL~~D  295 (632)
                      .+..+....+.......                                          ..+...++++.+||.+||+.|
T Consensus       237 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  316 (339)
T 1z57_A          237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD  316 (339)
T ss_dssp             SCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred             CChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC
Confidence            87665444332111100                                          011234578999999999999


Q ss_pred             cCCCCCHHHHHH
Q 006772          296 LRNRPLMADILH  307 (632)
Q Consensus       296 P~~RPs~~ell~  307 (632)
                      |.+||++.|+++
T Consensus       317 P~~Rpt~~ell~  328 (339)
T 1z57_A          317 PAKRITLREALK  328 (339)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             cccccCHHHHhc
Confidence            999999999886

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.9e-40  Score=342.15  Aligned_cols=253  Identities=19%  Similarity=0.297  Sum_probs=195.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE---
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV---  118 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~---  118 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++........+.+.++. .++..+ +|+||+.+++++.   
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCD------KRVAIKKIVLTDPQSVKHALREI-KIIRRL-DHDNIVKVFEILGPSG   81 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTT------EEEEEEEEECCSHHHHHHHHHHH-HHHHTC-CCTTBCCEEEEECTTS
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCC------eEEEEEEEecCChHHHHHHHHHH-HHHHhc-CCCCeeEEEEeccccc
Confidence            478999999999999999999987655      48999999766544444444443 445555 7999999998863   


Q ss_pred             -----------ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-cCC
Q 006772          119 -----------INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-EHD  186 (632)
Q Consensus       119 -----------~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-~~g  186 (632)
                                 ..+..|+||||++|+|.+.+.   .+.+++..++.++.||+.||+|||+++|+||||||+|||++ +++
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  158 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYMETDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL  158 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTT
T ss_pred             cccccccccccccCceeEEeeccCCCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC
Confidence                       347899999999999888774   35799999999999999999999999999999999999998 567


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS  266 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~  266 (632)
                      .+||+|||+++................||+.|+|||++...  ..++.++|+|||||++|||++|+.||.+.+..+....
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  236 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL  236 (320)
T ss_dssp             EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             eEEEccCccccccCCCcccccccccccccccccCcHHhcCc--ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999998654322222223445679999999988632  3688999999999999999999999999887666555


Q ss_pred             HHhhccC-----------------------CC-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          267 VVIKKEK-----------------------PC-----IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       267 i~~~~~~-----------------------p~-----~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +......                       +.     .+..+++++.++|.+||+.||++||++.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            4422110                       11     12468999999999999999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1e-39  Score=335.57  Aligned_cols=250  Identities=22%  Similarity=0.338  Sum_probs=201.2

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+.+.|++.+.||+|+||.||+|.+..++      ..||+|.+..... ......+.++..++..+ .|+||+.+++++.
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~------~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   95 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWE   95 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCCc------eEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeec
Confidence            34567999999999999999999987665      4899999865321 22222233344555555 6999999999886


Q ss_pred             E----CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEe-cCCcEEE
Q 006772          119 I----NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLS-EHDQLVL  190 (632)
Q Consensus       119 ~----~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld-~~g~vkL  190 (632)
                      .    +..+|+||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++  |+||||||+|||++ .++.+||
T Consensus        96 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl  173 (290)
T 1t4h_A           96 STVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI  173 (290)
T ss_dssp             EESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEE
T ss_pred             cccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEE
Confidence            5    466899999997 5888887654  47999999999999999999999999  99999999999998 7899999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~  269 (632)
                      +|||++.....     .......||+.|+|||++.    +.++.++|+|||||++|+|++|..||.... .......+..
T Consensus       174 ~Dfg~~~~~~~-----~~~~~~~~t~~y~aPE~~~----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  244 (290)
T 1t4h_A          174 GDLGLATLKRA-----SFAKAVIGTPEFMAPEMYE----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             CCTTGGGGCCT-----TSBEESCSSCCCCCGGGGG----TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             eeCCCcccccc-----cccccccCCcCcCCHHHHh----ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc
Confidence            99999864322     2223457899999999885    358899999999999999999999998854 4445544443


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ......++...++++.++|.+||+.||.+||++.++++
T Consensus       245 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            33344456778899999999999999999999999886

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7.4e-41  Score=347.94  Aligned_cols=268  Identities=21%  Similarity=0.285  Sum_probs=205.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.+.||+|+||.||+|.+..++      +.||||++..........+.+ +..++..+ .|+||+.+++++
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~-E~~~l~~l-~h~~iv~~~~~~   95 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDG------HFYALKRILCHEQQDREEAQR-EADMHRLF-NHPNILRLVAYC   95 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTC------CEEEEEEEEESSHHHHHHHHH-HHHHHHTC-CCTTBCCCCEEE
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCC------cEEEEEEEecCCHHHHHHHHH-HHHHHhhc-CCCCeeeEEEEE
Confidence            3467789999999999999999999987655      489999987654444444433 33445554 799999999988


Q ss_pred             EE----CCEEEEEEecCCC-CHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          118 VI----NGKICIAMKFYEG-SVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       118 ~~----~~~l~LVmEy~~G-sL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      ..    .+..|+||||+.| +|.+++...  .+..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl  175 (317)
T 2buj_A           96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL  175 (317)
T ss_dssp             EEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEE
Confidence            63    3478999999985 888888764  3467999999999999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCCCC------CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH--HH
Q 006772          191 GDFGIPYLLLGRSLSD------SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV--EE  262 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~------~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~--~e  262 (632)
                      +|||++..........      .......||+.|+|||++.+.....++.++|||||||++|||++|..||.....  ..
T Consensus       176 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  255 (317)
T 2buj_A          176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS  255 (317)
T ss_dssp             CCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC
T ss_pred             EecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch
Confidence            9999987642211000      011234579999999998754333468899999999999999999999964211  11


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       263 i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ....+ ........+..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       256 ~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          256 VALAV-QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHHHH-HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             hhHHh-hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            11112 2223334456789999999999999999999999999999987653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=8.3e-40  Score=338.25  Aligned_cols=248  Identities=23%  Similarity=0.366  Sum_probs=206.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|++.+.||+|+||.||+|.+..++      +.||||++...........+.++..++..+ .|+||+.+++++..++.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   94 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQ------KVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTK   94 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCC------cEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCe
Confidence            67999999999999999999987655      489999997543222222233333455555 78999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++| +|.+++.   .+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        95 ~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             EEEEEECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             EEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            9999999986 7777663   35799999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      ..   .......||+.|+|||++.+   ..++.++|+|||||++|||++|..||......+....+. ....+.++..++
T Consensus       172 ~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  244 (303)
T 3a7i_A          172 TQ---IKRNTFVGTPFWMAPEVIKQ---SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYS  244 (303)
T ss_dssp             TB---CCBCCCCSCGGGCCHHHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSCCCCCCSSCC
T ss_pred             cc---cccCccCCCcCccCHHHHhc---CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-cCCCCCCccccC
Confidence            21   12234578999999999974   367889999999999999999999999888776655543 345566778899


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .++.++|.+||+.||++||++.++++
T Consensus       245 ~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          245 KPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            99999999999999999999999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.3e-40  Score=351.19  Aligned_cols=255  Identities=21%  Similarity=0.287  Sum_probs=198.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++..... ........++..++..+ +|+||+.+++++..+
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~   96 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTG------AKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPD   96 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTC------CEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCC------CEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecC
Confidence            478999999999999999999987765      4899999865322 22222233334555555 599999999998765


Q ss_pred             ------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          121 ------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       121 ------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                            ..+|+||||+.++|.+++..   ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             CccccCceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeee
Confidence                  34699999998888887754   479999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++....      ......||+.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+..+.+..+......+
T Consensus       174 ~a~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~  245 (367)
T 1cm8_A          174 LARQADS------EMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP  245 (367)
T ss_dssp             TCEECCS------SCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccc------ccCcCcCCCCcCCHHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9986432      23345789999999998742  368899999999999999999999999988766555544211111


Q ss_pred             -----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          275 -----------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       275 -----------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                                                   .+...+++++.+||.+||+.||.+|||+.++++      ++++...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~------hp~f~~~  314 (367)
T 1cm8_A          246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA------HPYFESL  314 (367)
T ss_dssp             CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGTTT
T ss_pred             CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc------ChHHHhh
Confidence                                         123567899999999999999999999999887      5666543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2e-40  Score=338.72  Aligned_cols=257  Identities=23%  Similarity=0.370  Sum_probs=205.4

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...++.++|++.+.||+|+||.||+|.+..        +.||||++....  ..+.+.+ +..++..+ +|+||+.++++
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--------~~vavK~~~~~~--~~~~~~~-E~~~l~~l-~h~~iv~~~~~   82 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCIKNDA--TAQAFLA-EASVMTQL-RHSNLVQLLGV   82 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEETT--------EEEEEEECCCCC----HHHHH-THHHHTTC-CCTTBCCEEEE
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEcC--------CEEEEEEecchh--HHHHHHH-HHHHHHhC-CCCCEeeEEEE
Confidence            345778999999999999999999998742        479999987543  2233333 33445555 69999999998


Q ss_pred             EEEC-CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          117 SVIN-GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       117 ~~~~-~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      +... +..|+||||++| +|.+++.......+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg  162 (278)
T 1byg_A           83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG  162 (278)
T ss_dssp             ECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred             EEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecc
Confidence            6544 578999999985 88888876543458999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++.....      .....+|+.|+|||++.+   ..++.++|+||||+++|||++ |..||...+..+....+. ....
T Consensus       163 ~~~~~~~~------~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~  232 (278)
T 1byg_A          163 LTKEASST------QDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYK  232 (278)
T ss_dssp             C------------------CCTTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCC
T ss_pred             cccccccc------ccCCCccccccCHHHhCC---CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCC
Confidence            98754321      123357889999999864   368899999999999999998 999999887766665554 3445


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      +..+..+++++.++|.+||+.||++||++.++++.|+.+...
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            667889999999999999999999999999999999887643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-40  Score=357.18  Aligned_cols=265  Identities=20%  Similarity=0.329  Sum_probs=200.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-CCE
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-NGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-~~~  122 (632)
                      .|++.+.||+|+||.||+|.+...+.   ....||+|.+...........+.++..++..+ +||||+.+++++.. ++.
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~  165 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS  165 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTT---EEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSC
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCC---cEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCC
Confidence            47889999999999999998764331   23479999987644333233333344455555 79999999998654 568


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++ |+|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus       166 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             eEEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccc
Confidence            899999998 488877754 345789999999999999999999999999999999999999999999999999986533


Q ss_pred             CCCCC-CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCCCC
Q 006772          202 RSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG  279 (632)
Q Consensus       202 ~~~~~-~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p~~  279 (632)
                      ..... .......+|+.|+|||++.+   ..++.++|||||||++|||++ |.+||.+.+..++...+. ....+..|..
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~  320 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEY  320 (373)
T ss_dssp             -------------CCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH-TTCCCCCCTT
T ss_pred             cccccccccCCCCCcccccChHHhcC---CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH-cCCCCCCCCC
Confidence            22111 11233457889999999874   368899999999999999999 788888776555554444 3445566788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhccc
Q 006772          280 LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVY  317 (632)
Q Consensus       280 lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~  317 (632)
                      +|+++.++|.+||+.||++||++.++++.|+.+...+.
T Consensus       321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          321 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999998876554

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=6e-40  Score=345.79  Aligned_cols=250  Identities=23%  Similarity=0.362  Sum_probs=207.8

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|++....  .....+.+.++..++..+ .|+||+.+++++.
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  111 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTK------EVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFE  111 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe
Confidence            3478999999999999999999987665      489999986532  122223333344445554 7999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++.+|+||||++ ++|.+++...  ..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          112 DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  189 (335)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCce
Confidence            9999999999998 5777776543  479999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......   .......||+.|+|||++.+.   .++.++|+|||||++|||++|..||......+.+..+.  .....+|
T Consensus       190 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~  261 (335)
T 2owb_A          190 KVEYDG---ERKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIP  261 (335)
T ss_dssp             ECCSTT---CCBCCCCSCCSSCCHHHHHTS---CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCC
T ss_pred             ecccCc---ccccccCCCccccCHHHhccC---CCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh--cCCCCCC
Confidence            753221   222345789999999998743   57889999999999999999999999988777666554  3455678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+++++.+||.+||+.||++||++.++++
T Consensus       262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          262 KHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            899999999999999999999999999886

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.3e-40  Score=343.00  Aligned_cols=258  Identities=18%  Similarity=0.365  Sum_probs=198.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      ++|++.+.||+|+||.||+|.+.  +      +.||||++....   ......+.+.......+|+||+.+++++...  
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~--~------~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR--G------EKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET--T------EEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             cceEEEeEeecCCCeEEEEEEEC--C------ceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            68999999999999999999875  2      489999986432   2233333333333345899999999999887  


Q ss_pred             --CEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceeeeeeCCeEEEecCCcEE
Q 006772          121 --GKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI--------GLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       121 --~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~--------~IvHRDLKP~NILld~~g~vk  189 (632)
                        +.+|+||||++| +|.+++..   ..+++..++.++.|++.||+|||++        +|+||||||+|||++.++.+|
T Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  182 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC  182 (337)
T ss_dssp             GGCEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CCCceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence              789999999985 88888754   3799999999999999999999999        999999999999999999999


Q ss_pred             EEecCCceeccCCCCC-CCccccccCCCccCCccccCCCCCCCC---CcccccchhHHHHHHHHhC----------CCCC
Q 006772          190 LGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRGPI---SFETDTWGFGCSIMEMLTG----------IQPW  255 (632)
Q Consensus       190 L~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g~~---t~ksDvwSlGvvL~EmltG----------~~PF  255 (632)
                      |+|||+++........ ........||+.|+|||++.+......   +.++|||||||++|||++|          ..||
T Consensus       183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~  262 (337)
T 3mdy_A          183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY  262 (337)
T ss_dssp             ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence            9999999765332211 111234579999999999975421110   1249999999999999999          7787


Q ss_pred             CCC-----CHHHHHHHHHhhccCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          256 FGK-----SVEEIYHSVVIKKEKPCIPS-----GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       256 ~~~-----~~~ei~~~i~~~~~~p~~p~-----~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ...     ........+......+.+|.     .+++++.++|.+||+.||++||++.++++.|+.+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence            653     22333333333344455553     466789999999999999999999999999988764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.2e-40  Score=346.68  Aligned_cols=260  Identities=23%  Similarity=0.347  Sum_probs=186.1

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEee
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ....++.++|++.+.||+|+||.||+|.+..++      +.||||++...... ....+..+... +.+..+|+||+.++
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~~~-~~~~~~h~niv~~~   87 (327)
T 3aln_A           15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSG------QIMAVKRIRSTVDEKEQKQLLMDLDV-VMRSSDCPYIVQFY   87 (327)
T ss_dssp             EEECCCSCSEEC-CEEEECSSEEEEEEEETTTT------EEEEEEEEECCCCHHHHHHHHHHHHH-HHSSCCCTTBCCEE
T ss_pred             HhcccCHHHhhehheeccCCCEEEEEEEEcCCC------CEEEEEEeecccCchHHHHHHHHHHH-HHHcCCCCcEeeee
Confidence            334577899999999999999999999987655      48999999765332 22333333332 34455899999999


Q ss_pred             EEEEECCEEEEEEecCCCCHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEE
Q 006772          115 GISVINGKICIAMKFYEGSVGDRIAQQ---RGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~GsL~d~l~~~---~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL  190 (632)
                      +++..++..+|||||+.|+|.+++...   ....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||
T Consensus        88 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl  167 (327)
T 3aln_A           88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL  167 (327)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEE
T ss_pred             eEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEE
Confidence            999999999999999999888877642   246899999999999999999999999 9999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCC-CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVV  268 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~  268 (632)
                      +|||+++.....    .......||+.|+|||++... ....++.++|+|||||++|||++|..||.+.... +....+.
T Consensus       168 ~Dfg~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  243 (327)
T 3aln_A          168 CDFGISGQLVDS----IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV  243 (327)
T ss_dssp             CCCSSSCC----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC
T ss_pred             ccCCCceecccc----cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh
Confidence            999998765322    112234689999999998432 1345889999999999999999999999875432 2211111


Q ss_pred             hhccCCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 IKKEKPCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ~~~~~p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                       ....+.++    ..+++++.+||.+||+.||++||++.++++
T Consensus       244 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          244 -KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             -CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence             12222222    468999999999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=339.73  Aligned_cols=255  Identities=24%  Similarity=0.413  Sum_probs=199.2

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.+.||+|+||.||+|.+..        +.||||.+....  ..+.+.++ ..++..+ +||||+.+++++
T Consensus         3 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--------~~vavK~~~~~~--~~~~~~~E-~~~l~~l-~hp~iv~~~~~~   70 (307)
T 2eva_A            3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRA--------KDVAIKQIESES--ERKAFIVE-LRQLSRV-NHPNIVKLYGAC   70 (307)
T ss_dssp             CBCCGGGEEEEEEEECCSSSEEEEEEETT--------EEEEEEECSSTT--HHHHHHHH-HHHHHHC-CCTTBCCEEEBC
T ss_pred             CcCCHhHeeeeeEeecCCCceEEEEEECC--------eeEEEEEecChh--HHHHHHHH-HHHHhcC-CCCCcCeEEEEE
Confidence            35778899999999999999999998752        479999986432  22333333 3445555 799999999876


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCceeeeeeCCeEEEecCCc-EEEE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHS---IGLLVLNLKPSNLLLSEHDQ-LVLG  191 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs---~~IvHRDLKP~NILld~~g~-vkL~  191 (632)
                      .  +..|+||||++ |+|.+++..... ..+++..++.++.|++.||+|||+   ++|+||||||+|||++.++. +||+
T Consensus        71 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~  148 (307)
T 2eva_A           71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC  148 (307)
T ss_dssp             T--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred             c--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence            5  45899999998 588888764322 247899999999999999999999   89999999999999998886 7999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC--HHHHHHHHHh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS--VEEIYHSVVI  269 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~--~~ei~~~i~~  269 (632)
                      |||++.....      ......||+.|+|||++.+   ..++.++|||||||++|||++|+.||....  ...+...+ .
T Consensus       149 Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~  218 (307)
T 2eva_A          149 DFGTACDIQT------HMTNNKGSAAWMAPEVFEG---SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-H  218 (307)
T ss_dssp             CCCC------------------CCTTSSCHHHHTC---CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH-H
T ss_pred             cccccccccc------ccccCCCCCceEChhhhCC---CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH-h
Confidence            9999875422      1223468999999999974   368899999999999999999999998643  22333332 3


Q ss_pred             hccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       270 ~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      ....+..+..+|+.+.++|.+||+.||++||++.++++.|+.+...+
T Consensus       219 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          219 NGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             TTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             cCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence            34556677889999999999999999999999999999998876544

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.6e-40  Score=349.61  Aligned_cols=245  Identities=20%  Similarity=0.304  Sum_probs=180.3

Q ss_pred             CCeEEE---eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLK---HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~---~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.   +.||+|+||.||+|.++.++      +.||||++.+...   .. ..++..++..+.+||||+.+++++..
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~---~~-~~~e~~~l~~l~~h~niv~~~~~~~~   77 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSN------QAFAVKIISKRME---AN-TQKEITALKLCEGHPNIVKLHEVFHD   77 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTC------CEEEEEEEEGGGH---HH-HHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCC------CEEEEEEEChhhh---hh-HHHHHHHHHHhcCCCCeeEEEEEEEc
Confidence            356665   78999999999999998765      4899999965322   22 23344556677779999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cEEEEecCC
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGI  195 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~vkL~DFGl  195 (632)
                      ++..||||||++| +|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++   .+||+|||+
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~  155 (325)
T 3kn6_A           78 QLHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGF  155 (325)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTT
T ss_pred             CCEEEEEEEccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccc
Confidence            9999999999985 88888765  35799999999999999999999999999999999999998766   899999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-------HHHHHHHH
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-------EEIYHSVV  268 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-------~ei~~~i~  268 (632)
                      ++.....   .......+||+.|+|||++.+   ..++.++|||||||++|||++|..||.+.+.       .++...+.
T Consensus       156 a~~~~~~---~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~  229 (325)
T 3kn6_A          156 ARLKPPD---NQPLKTPCFTLHYAAPELLNQ---NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK  229 (325)
T ss_dssp             CEECCC----------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT
T ss_pred             ceecCCC---CCcccccCCCcCccCHHHhcC---CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH
Confidence            9865332   122344578999999999874   3688999999999999999999999987432       34444443


Q ss_pred             hhccCCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 IKKEKPCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ~~~~~p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .  ....++    ..+++++.+||.+||+.||.+||++.++++
T Consensus       230 ~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          230 K--GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             T--TCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             c--CCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            2  222223    368999999999999999999999998775

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.2e-39  Score=337.56  Aligned_cols=247  Identities=21%  Similarity=0.342  Sum_probs=203.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++..........+ .++..++..+ +||||+.+++++..++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~-~~e~~~l~~l-~h~~i~~~~~~~~~~~~   80 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSL-ENEIAVLKKI-KHENIVTLEDIYESTTH   80 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEECC------HH-HHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCC------CEEEEEEEecccccchHHH-HHHHHHHHhC-CCCCeeehhhhcccCCE
Confidence            67999999999999999999987655      4899999976543333333 3333455555 79999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecCCcee
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFGlak~  198 (632)
                      .|+||||++ |+|.+.+...  +.+++..++.++.|++.||+|||+++|+||||||+|||+   +.++.+||+|||+++.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             EEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            999999998 5888887654  479999999999999999999999999999999999999   7889999999999865


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--CCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--PCI  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--p~~  276 (632)
                      ...     .......||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+.+..+....+......  ...
T Consensus       159 ~~~-----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  230 (304)
T 2jam_A          159 EQN-----GIMSTACGTPGYVAPEVLAQ---KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF  230 (304)
T ss_dssp             CCC-----BTTHHHHSCCCBCCTTTBSS---CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTT
T ss_pred             cCC-----CccccccCCCCccChHHhcc---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccc
Confidence            321     12234568999999999974   36889999999999999999999999998888777766644322  223


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+++++.++|.+||+.||++||++.++++
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          231 WDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            4678999999999999999999999999886

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=6.5e-40  Score=340.15  Aligned_cols=256  Identities=25%  Similarity=0.435  Sum_probs=189.0

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .+..++|++.+.||+|+||.||+|.+..++      +.||||++...... .......++..+ .+..+|+||+.+++++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~i~~~~~~~   93 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTG------HVIAVKQMRRSGNKEENKRILMDLDVV-LKSHDCPYIVQCFGTF   93 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTC------CEEEEEEEETTSCHHHHHHHHHHHHHH-HHTTTCTTBCCEEEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCC------eEEEEEEecccccchHHHHHHHHHHHH-HHhcCCCceeeEEEEE
Confidence            355689999999999999999999987655      48999999765432 223333333333 3455899999999999


Q ss_pred             EECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..++.+|+||||+.+. .+.+.......+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus        94 ~~~~~~~lv~e~~~~~-~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A           94 ITNTDVFIAMELMGTC-AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             ECSSEEEEEECCCSEE-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCcEEEEEeccCCc-HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            9999999999999544 4444444456899999999999999999999995 9999999999999999999999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhccC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVVIKKEK  273 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~i~~~~~~  273 (632)
                      +.....    .......||+.|+|||++...  ....++.++|||||||++|||++|..||... ...+....+.. ...
T Consensus       173 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~  247 (318)
T 2dyl_A          173 GRLVDD----KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ-EEP  247 (318)
T ss_dssp             ------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH-SCC
T ss_pred             hhccCC----ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc-cCC
Confidence            765322    112334689999999998532  1345788999999999999999999999874 34444444442 333


Q ss_pred             CCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+  ..+++++.++|.+||+.||.+||++.++++
T Consensus       248 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          248 PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            4344  468999999999999999999999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=7.6e-40  Score=351.66  Aligned_cols=248  Identities=21%  Similarity=0.346  Sum_probs=199.3

Q ss_pred             CeEE--EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKL--KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l--~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .|++  .+.||+|+||.||+|.+..++      +.||+|+++.......+.+. ++..++..+ +|+||+.+++++...+
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g------~~vavK~~~~~~~~~~~~~~-~E~~~l~~l-~hpnIv~~~~~~~~~~  159 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETATG------LKLAAKIIKTRGMKDKEEVK-NEISVMNQL-DHANLIQLYDAFESKN  159 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTTC------CEEEEEEEECCSHHHHHHHH-HHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCCC------cEEEEEEEcccccccHHHHH-HHHHHHHhC-CCCCCCeEEEEEEECC
Confidence            3444  678999999999999987665      48999999876544444444 344555555 7999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE--ecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL--SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl--d~~g~vkL~DFGlak~  198 (632)
                      .+||||||++ |+|.+.+... ...+++..++.++.||+.||+|||+++|+||||||+|||+  +.++.+||+|||+++.
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~  238 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR  238 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence            9999999998 5777877653 3479999999999999999999999999999999999999  4667999999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--C
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--I  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~  276 (632)
                      ....    ......+||+.|+|||++..   ..++.++|||||||++|||++|..||.+.+..+....+........  .
T Consensus       239 ~~~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  311 (373)
T 2x4f_A          239 YKPR----EKLKVNFGTPEFLAPEVVNY---DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE  311 (373)
T ss_dssp             CCTT----CBCCCCCSSCTTCCHHHHTT---CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGG
T ss_pred             cCCc----cccccccCCCcEeChhhccC---CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhh
Confidence            6432    12234579999999999864   3688999999999999999999999999988877777664432221  1


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+++++.+||.+||+.||.+||++.|+++
T Consensus       312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          312 FQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            2578999999999999999999999999987

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.7e-40  Score=373.27  Aligned_cols=260  Identities=23%  Similarity=0.398  Sum_probs=214.3

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...|..++|++.++||+|+||.||+|.+...       ..||||+++..... .+.+.+ +..++..+ +|+||+.++++
T Consensus       261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-------~~vavK~~~~~~~~-~~~~~~-E~~~l~~l-~hpniv~~~~~  330 (535)
T 2h8h_A          261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKTLKPGTMS-PEAFLQ-EAQVMKKL-RHEKLVQLYAV  330 (535)
T ss_dssp             CSBCCGGGEEEEEEEEECSSEEEEEEEETTT-------EEEEEEEECTTSSC-HHHHHH-HHHHHHHC-CCTTBCCEEEE
T ss_pred             ceecchhhhhhheecccCCCeEEEEEEECCC-------ceEEEEEeCCCCCC-HHHHHH-HHHHHHhC-CCCCEeeEEEE
Confidence            3447789999999999999999999998643       36999999764432 234444 34555555 69999999998


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +.. +.+||||||+. |+|.+++....+..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       331 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  409 (535)
T 2h8h_A          331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL  409 (535)
T ss_dssp             ECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred             Eee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEccccc
Confidence            765 67899999998 5899988765456799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++.......  .......+|..|+|||++..   +.++.++|||||||+||||++ |..||.+....++...+. ...+.
T Consensus       410 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~  483 (535)
T 2h8h_A          410 ARLIEDNEY--TARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRM  483 (535)
T ss_dssp             TTTCCCHHH--HTTCSTTSCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH-TTCCC
T ss_pred             ceecCCCce--ecccCCcCcccccCHHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            976432110  11122356789999999863   468999999999999999999 999999998888777665 34455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..+..+++++.+||.+||+.||++||++.+|++.|+.+.
T Consensus       484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            667899999999999999999999999999999998654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.1e-39  Score=332.20  Aligned_cols=252  Identities=23%  Similarity=0.340  Sum_probs=199.9

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||||++.....   .....+ .++..++..+ +|+||+.++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~-~~e~~~l~~l-~h~~i~~~~   77 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKI-KREIQNLKLF-RHPHIIKLY   77 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHH-HHHHHHHHTC-CCTTBCCEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCC------ceEEEEEeccccccchhHHHHH-HHHHHHHhcC-CCCCEeEEE
Confidence            3456689999999999999999999987655      4899999864321   111222 3333444444 699999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++..++..|+||||++ ++|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        78 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~df  155 (276)
T 2h6d_A           78 QVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF  155 (276)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEecCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeec
Confidence            99999999999999998 5888888654  47999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |++......    .......||+.|+|||++.+.  ...+.++|+||||+++|+|++|..||...+..+....+.  ...
T Consensus       156 g~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~  227 (276)
T 2h6d_A          156 GLSNMMSDG----EFLRTSCGSPNYAAPEVISGR--LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR--GGV  227 (276)
T ss_dssp             CGGGCCCC-----------------CCTGGGTTS--CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCC
T ss_pred             ccccccCCC----cceecccCCccccCHHHHcCC--CCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh--cCc
Confidence            998765322    112345689999999998743  123689999999999999999999999988777766654  344


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+|..++.++.++|.+||+.||++||++.++++
T Consensus       228 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          228 FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            5567889999999999999999999999999987

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=6.5e-40  Score=333.34  Aligned_cols=253  Identities=25%  Similarity=0.312  Sum_probs=200.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.............++..++..+ +|+||+.+++++..++.
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCC------cEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCE
Confidence            57999999999999999999987655      489999986543322233334444455554 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .|+||||++| +|.+++..  ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        80 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             EEEEEEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            9999999985 77776643  35799999999999999999999999999999999999999999999999999976532


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhccCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~~~p~~p~~l  280 (632)
                      ... ........||+.|+|||++.+.  ..++.++|+|||||++|||++|..||.+.+.. ..+...............+
T Consensus       158 ~~~-~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (276)
T 2yex_A          158 NNR-ERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI  234 (276)
T ss_dssp             TTE-ECCBCCCCSCGGGCCGGGGTCS--SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGS
T ss_pred             Ccc-hhcccCCccccCccChHHHhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhc
Confidence            211 1122345789999999998743  12477899999999999999999999876533 2233333222222223578


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++++.++|.+||+.||.+||++.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          235 DSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            999999999999999999999999876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.3e-39  Score=362.68  Aligned_cols=248  Identities=22%  Similarity=0.337  Sum_probs=203.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------------hHHHHHHHHHHHhhhccCCCce
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------------CAKVFVNKFEELFPKFRESQSV  110 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------------~~~~~~~~~~~il~~l~~h~~I  110 (632)
                      ++|++.++||+|+||.||+|.++.++      +.||||++.+....            ...+.+..+..++..+ +||||
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpni  108 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGH------SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNI  108 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTC------CEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTB
T ss_pred             cceEEEeEecccCCeEEEEEEECCCC------cEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCC
Confidence            68999999999999999999998765      48999999764321            1112233334555555 69999


Q ss_pred             eEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---
Q 006772          111 CWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---  186 (632)
Q Consensus       111 ~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---  186 (632)
                      +.+++++..++.+||||||++ |+|.+.+...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++   
T Consensus       109 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          109 IKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCS
T ss_pred             CeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCc
Confidence            999999999999999999998 5888888654  4799999999999999999999999999999999999999876   


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS  266 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~  266 (632)
                      .+||+|||+++.....    ......+||+.|+|||++.    +.++.++|||||||++|+|++|..||.+.+..++...
T Consensus       187 ~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  258 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKD----YKLRDRLGTAYYIAPEVLK----KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKK  258 (504)
T ss_dssp             SEEECCCTTCEECCTT----SCBCCCCSCTTTCCHHHHT----TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             cEEEEECCCCEEcCCC----CccccccCCcCCCCHHHhc----cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            6999999999875432    2234457999999999985    3588999999999999999999999999998888877


Q ss_pred             HHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          267 VVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       267 i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.........+  ..+|+++.+||.+||+.||.+|||+.++++
T Consensus       259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          259 VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            76433222211  578999999999999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=4e-40  Score=339.72  Aligned_cols=263  Identities=21%  Similarity=0.320  Sum_probs=204.0

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++..........+.++. .++..+ +||||+.+++++..++
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~~~   89 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETG------ALAAAKVIETKSEEELEDYIVEI-EILATC-DHPYIVKLLGAYYHDG   89 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTC------CEEEEEEEC----CCHHHHHHHH-HHHHHC-CCTTBCCEEEEEECC-
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCC------cEEEEEEecCCCHHHHHHHHHHH-HHHhcC-CCCCEeeeeeeeeeCC
Confidence            378999999999999999999987655      48999998765444444444443 444554 7999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          122 KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       122 ~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      ..++||||++| +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++....
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  168 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL  168 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence            99999999986 55555544 34679999999999999999999999999999999999999999999999999875432


Q ss_pred             CCCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-CCCC
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-PCIP  277 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-p~~p  277 (632)
                      ..   ........||+.|+|||++...  ....++.++|+|||||++|||++|..||...+..+....+...... ...+
T Consensus       169 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  245 (302)
T 2j7t_A          169 KT---LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP  245 (302)
T ss_dssp             HH---HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSG
T ss_pred             cc---ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCc
Confidence            11   0112234689999999998421  1346789999999999999999999999998877665555433222 2235


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                      ..++.++.++|.+||+.||++||++.++++      ++++....|
T Consensus       246 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~~  284 (302)
T 2j7t_A          246 SKWSVEFRDFLKIALDKNPETRPSAAQLLE------HPFVSSITS  284 (302)
T ss_dssp             GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT------STTTTTCCC
T ss_pred             cccCHHHHHHHHHHcccChhhCCCHHHHhc------ChHHhhhcc
Confidence            678999999999999999999999999876      556655444

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1e-39  Score=362.64  Aligned_cols=247  Identities=22%  Similarity=0.345  Sum_probs=201.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.++.++      ..||||++.+..  ......+ .++..++..+ +||||+.+++++...
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~-~~E~~~l~~l-~hpniv~~~~~~~~~  108 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTH------VERAIKIIRKTSVSTSSNSKL-LEEVAVLKLL-DHPNIMKLYDFFEDK  108 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTC------CEEEEEEEEC-----CTTHHH-HHHHHHHTTC-CCTTBCCEEEEEECS
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCC------cEEEEEEEeccccCchHHHHH-HHHHHHHHhC-CCCCCCeEEEEEEeC
Confidence            46999999999999999999998765      489999997543  1222333 3333455554 799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC---CcEEEEecCCc
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH---DQLVLGDFGIP  196 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~---g~vkL~DFGla  196 (632)
                      +.+||||||+. |+|.+.+...  ..+++..++.++.||+.||.|||+++|+||||||+|||++..   +.+||+|||++
T Consensus       109 ~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          109 RNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             CEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            99999999998 5888887654  479999999999999999999999999999999999999764   45999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      +.....    ......+||+.|+|||++.    +.++.++|||||||++|+|++|..||.+.+..++...+.........
T Consensus       187 ~~~~~~----~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  258 (494)
T 3lij_A          187 AVFENQ----KKMKERLGTAYYIAPEVLR----KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS  258 (494)
T ss_dssp             EECBTT----BCBCCCCSCTTTCCHHHHT----TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS
T ss_pred             eECCCC----ccccccCCCcCeeCHHHHc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence            875432    2234467999999999985    35889999999999999999999999999988888777654433332


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 P--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +  ..+++++.+||.+||+.||.+|||+.++++
T Consensus       259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            2  478999999999999999999999999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.5e-40  Score=360.56  Aligned_cols=261  Identities=20%  Similarity=0.297  Sum_probs=194.1

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-------hhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-------DCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-------~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.+...       ......+.++..++.++ +||||+.++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~  206 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTC------KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIK  206 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCC
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCC------cEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEE
Confidence            478999999999999999999988765      4899999865321       01111123334455555 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC---cEEE
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD---QLVL  190 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g---~vkL  190 (632)
                      +++. .+..|+||||++ |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++   .+||
T Consensus       207 ~~~~-~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          207 NFFD-AEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             EEEE-SSEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             EEEe-cCceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEE
Confidence            9874 567899999998 577776643  45799999999999999999999999999999999999997544   5999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVI  269 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~  269 (632)
                      +|||+++.....    ......+||+.|+|||++.+.....++.++|+|||||++|||++|..||.+.... .....+..
T Consensus       284 ~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~  359 (419)
T 3i6u_A          284 TDFGHSKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS  359 (419)
T ss_dssp             CCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred             eecccceecCCC----ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence            999999765321    2234467999999999986533457889999999999999999999999875432 22233322


Q ss_pred             hccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          270 KKEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       270 ~~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                       .....   ....+++++.+||.+||+.||++||++.++++      ++++.+.+|.
T Consensus       360 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~------hp~~~~~~~~  409 (419)
T 3i6u_A          360 -GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR------HPWLQDEDMK  409 (419)
T ss_dssp             -TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGCCHHHH
T ss_pred             -CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC------CcccCChhHH
Confidence             22211   12578999999999999999999999999887      6666655443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2e-40  Score=341.21  Aligned_cols=261  Identities=23%  Similarity=0.306  Sum_probs=188.8

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.+.||+|+||.||+|.+..++      +.||||.+...........+.++..++..+ +||||+.+++++
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   82 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSF   82 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----------CEEEEECCC----------------CCCCC-CCTTBCCEEEEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCC------cEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEE
Confidence            4477899999999999999999999977554      489999986543222222222333344444 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQ------RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~------~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL  190 (632)
                      ..++..++||||++ |+|.+++...      ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  162 (303)
T 2vwi_A           83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI  162 (303)
T ss_dssp             ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEE
T ss_pred             eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEE
Confidence            99999999999997 5888877642      2356999999999999999999999999999999999999999999999


Q ss_pred             EecCCceeccCCCC--CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 006772          191 GDFGIPYLLLGRSL--SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV  268 (632)
Q Consensus       191 ~DFGlak~~~~~~~--~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~  268 (632)
                      +|||++........  .........||+.|+|||++.+.  ..++.++|+|||||++|||++|..||...+..+......
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  240 (303)
T 2vwi_A          163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL  240 (303)
T ss_dssp             CCCHHHHHCC---------------CCCTTCCHHHHHHH--HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH
T ss_pred             EeccchheeccCCCccchhhhcccCCCccccCHHHhccc--cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHh
Confidence            99999876532211  11112345789999999998631  247889999999999999999999999877655444333


Q ss_pred             hhccC--------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 IKKEK--------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ~~~~~--------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .....        +.....+++++.++|.+||+.||.+||++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            22111        1223567899999999999999999999999886

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.3e-40  Score=342.82  Aligned_cols=270  Identities=20%  Similarity=0.351  Sum_probs=208.7

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..+..++|++.+.||+|+||.||+|.+.....  ..++.||||++........+.+.++ ..++..+ +|+||+.+++++
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~  111 (326)
T 2w1i_A           36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQD--NTGEVVAVKKLQHSTEEHLRDFERE-IEILKSL-QHDNIVKYKGVC  111 (326)
T ss_dssp             -CCCGGGEEEEEEEECCSSEEEEEEEECTTSS--SCCEEEEEEEESSCCSHHHHHHHHH-HHHHHTC-CCTTBCCEEEEE
T ss_pred             cccCHHHceeeeeeccCCCeEEEEEEeccccC--CCceEEEEEEeccCCHHHHHHHHHH-HHHHHhC-CCCCeeeEEEEE
Confidence            44566889999999999999999998643211  2346899999987554444444443 3455555 699999999987


Q ss_pred             EEC--CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          118 VIN--GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       118 ~~~--~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ...  ..+++||||++ |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       112 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg  190 (326)
T 2w1i_A          112 YSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG  190 (326)
T ss_dssp             CC----CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred             EecCCCceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCc
Confidence            654  37899999998 5888887654 3579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH------------H
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE------------E  262 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~------------e  262 (632)
                      +++................+|..|+|||++.+.   .++.++|||||||++|||++|..||......            .
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~  267 (326)
T 2w1i_A          191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM  267 (326)
T ss_dssp             TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHH
T ss_pred             chhhccccccccccccCCCCceeEECchhhcCC---CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhh
Confidence            998764322111112234578889999998743   5788999999999999999999998643111            0


Q ss_pred             ---HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          263 ---IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       263 ---i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                         ...........+..+..+|+++.++|.+||+.||++||++.++++.|+.+...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          268 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence               11122223345566788999999999999999999999999999999887643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=345.00  Aligned_cols=264  Identities=13%  Similarity=0.146  Sum_probs=200.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCc--ccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCcee--------
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDF--DEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVC--------  111 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~--~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~--------  111 (632)
                      .++|++.+.||+|+||.||+|.+..+....  ..++.||||++.....     + .++..++..+ .|+||+        
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~-----~-~~E~~~l~~l-~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGR-----L-FNEQNFFQRA-AKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTST-----H-HHHHHHHHHH-CCHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccch-----H-HHHHHHHHHh-cccchhhhhhhhcc
Confidence            479999999999999999999987642100  0235899999975421     1 1222333333 355544        


Q ss_pred             -------EeeEEEEE-CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          112 -------WLHGISVI-NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       112 -------~l~~~~~~-~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                             .+++++.. ++..||||||+.|+|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred             CCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence                   46777776 7899999999977999998765456899999999999999999999999999999999999999


Q ss_pred             cCC--cEEEEecCCceeccCCCC----CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC
Q 006772          184 EHD--QLVLGDFGIPYLLLGRSL----SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG  257 (632)
Q Consensus       184 ~~g--~vkL~DFGlak~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~  257 (632)
                      .++  .+||+|||+++.......    .........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+
T Consensus       194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC---GPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            998  999999999976533211    11122345799999999999743   688999999999999999999999987


Q ss_pred             CC--HHHHHHHHHh-hccCCCCC------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          258 KS--VEEIYHSVVI-KKEKPCIP------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       258 ~~--~~ei~~~i~~-~~~~p~~p------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ..  ...+...... ....+.++      ..+++++.++|.+||+.||++||++.++++.|+.+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          271 CLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             GTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            53  3333322221 12222222      25699999999999999999999999999999887654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.6e-39  Score=347.93  Aligned_cols=257  Identities=23%  Similarity=0.307  Sum_probs=201.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      |--.++|++.+.||+|+||.||+|.+..++      +.||||++...... .......++..++..+ +|+||+.+++++
T Consensus        38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~  110 (371)
T 4exu_A           38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSG------EKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVF  110 (371)
T ss_dssp             EEEETTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEE
T ss_pred             ecccccEEEEeEEecCCCeEEEEEEECCCC------CEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhhe
Confidence            333478999999999999999999988765      48999999754322 1122223333445555 699999999999


Q ss_pred             EECCEE------EEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          118 VINGKI------CIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       118 ~~~~~l------~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      ...+..      |+||||+.|+|.+.+    ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus       111 ~~~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~  186 (371)
T 4exu_A          111 TPASSLRNFYDFYLVMPFMQTDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL  186 (371)
T ss_dssp             CSCSSSTTCCCCEEEEECCCEEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             eccCCcccceeEEEEEccccccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEE
Confidence            876654      999999999887765    3469999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++....      ......||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+....
T Consensus       187 Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  258 (371)
T 4exu_A          187 DFGLARHADA------EMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT  258 (371)
T ss_dssp             STTCC--------------CTTCCCTTSCHHHHSCC--SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ecCccccccc------CcCCcccCccccCHHHhcCC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            9999875422      22345789999999998742  368899999999999999999999999988766655554221


Q ss_pred             cCC-----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          272 EKP-----------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       272 ~~p-----------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                      ..+                             ..+..+++++.+||.+||+.||++||++.++++      ++++...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~  330 (371)
T 4exu_A          259 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT------HPFFEPF  330 (371)
T ss_dssp             CCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT------SGGGTTT
T ss_pred             CCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc------CcccccC
Confidence            111                             012467899999999999999999999999886      6666543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.2e-41  Score=355.62  Aligned_cols=260  Identities=21%  Similarity=0.294  Sum_probs=196.3

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+..++|++.+.||+|+||.||+|.+..       ++.||||++...........+.++..++..+ .|+||+.+++++.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   97 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRLAD-------GTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM   97 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECCSS-------SCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEEC
T ss_pred             HHHhhccccceeEecCCCcEEEEEEecC-------CCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEe
Confidence            3556899999999999999999997432       2479999997643222111223333445554 6999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CceeeeeeCCeEEEecCCcEEEEe
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSI---GLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~---~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      .++..++||||+.| +|.+++....  ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D  177 (326)
T 3uim_A           98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD  177 (326)
T ss_dssp             CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred             cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence            99999999999985 8888876543  23599999999999999999999999   999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-----HHHHHHHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-----VEEIYHSV  267 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-----~~ei~~~i  267 (632)
                      ||+++......  ........||+.|+|||++.+   ..++.++|||||||++|||++|..||....     .......+
T Consensus       178 fg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  252 (326)
T 3uim_A          178 FGLAKLMDYKD--THVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV  252 (326)
T ss_dssp             CSSCEECCSSS--SCEECCCCSCGGGCCHHHHHH---SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred             CccccccCccc--ccccccccCCcCccCHHHhcc---CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence            99998753321  122234569999999999864   357899999999999999999999995211     00011111


Q ss_pred             Hh---h---------ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          268 VI---K---------KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       268 ~~---~---------~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ..   .         .....++...+.++.+++.+||+.||.+||++.++++.|+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            00   0         00011122334789999999999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.9e-40  Score=364.49  Aligned_cols=248  Identities=23%  Similarity=0.349  Sum_probs=207.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .++|++.+.||+|+||.||+|.++.++      +.||||++.+..   ......+. ++..++..+ +||||+.+++++.
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~-~E~~~l~~l-~hpniv~~~~~~~   96 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITG------QECAVKVISKRQVKQKTDKESLL-REVQLLKQL-DHPNIMKLYEFFE   96 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCCBSSCHHHHH-HHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCC------CEEEEEEEEhhhcccchHHHHHH-HHHHHHHhC-CCCCCCcEEEEEE
Confidence            468999999999999999999988765      489999986532   22233333 344555555 7999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE---ecCCcEEEEecC
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL---SEHDQLVLGDFG  194 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl---d~~g~vkL~DFG  194 (632)
                      ..+.+|+||||+. |+|.+.+..  .+.+++..++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  174 (484)
T 3nyv_A           97 DKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG  174 (484)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred             eCCEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence            9999999999998 688887754  3579999999999999999999999999999999999999   567899999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++.....    ......+||+.|+|||++.+    .++.++|||||||++|+|++|..||.+.+..++...+.......
T Consensus       175 ~a~~~~~~----~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  246 (484)
T 3nyv_A          175 LSTHFEAS----KKMKDKIGTAYYIAPEVLHG----TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF  246 (484)
T ss_dssp             HHHHBCCC----CSHHHHTTGGGTCCHHHHHT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             eeEEcccc----cccccCCCCccccCceeecC----CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            99765322    22344579999999999853    58899999999999999999999999999888888776544443


Q ss_pred             CCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 CIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 ~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..|  ..+|+++.+||.+||+.||.+|||+.++++
T Consensus       247 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          247 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            333  468999999999999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=6.8e-40  Score=363.20  Aligned_cols=247  Identities=23%  Similarity=0.372  Sum_probs=204.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.++.++      +.||||++.+..  ......+. ++..++..+ +||||+.+++++...
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~-~E~~~l~~l-~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQ------QEYAVKVINKASAKNKDTSTIL-REVELLKKL-DHPNIMKLFEILEDS   93 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTC------CEEEEEEEEHHHHBCSCHHHHH-HHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCC------CEEEEEEEecccccchHHHHHH-HHHHHHHhC-CCCCcCeEEEEEEcC
Confidence            78999999999999999999988665      489999986422  11223333 334555555 799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe---cCCcEEEEecCCc
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS---EHDQLVLGDFGIP  196 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld---~~g~vkL~DFGla  196 (632)
                      +.+|+||||+. |+|.+.+...  +.+++..++.++.||+.||.|||+++|+||||||+|||++   .++.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            99999999998 5888888654  4799999999999999999999999999999999999995   4567999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      +.....    ......+||+.|+|||++.+    .++.++|||||||++|+|++|..||.+.+..++...+.........
T Consensus       172 ~~~~~~----~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  243 (486)
T 3mwu_A          172 TCFQQN----TKMKDRIGTAYYIAPEVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL  243 (486)
T ss_dssp             TTBCCC--------CCTTGGGGCCGGGGGS----CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCS
T ss_pred             eECCCC----CccCCCcCCCCCCCHHHhCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence            754322    22344579999999999863    5889999999999999999999999999988888777654443333


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 P--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |  ..+|+++.+||.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            3  468999999999999999999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=7.5e-40  Score=343.87  Aligned_cols=255  Identities=21%  Similarity=0.322  Sum_probs=199.6

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      -..++|++.+.||+|+||.||+|.+..++      +.||||++...... .......++..++..+ +|+||+.+++++.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   94 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTG------RIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCK   94 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTC------CEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCC------ceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEee
Confidence            34589999999999999999999987655      48999998654332 2222333344455555 6999999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .++..|+||||++|++++.+... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        95 ~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           95 KKKRWYLVFEFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFART  173 (331)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             cCCEEEEEEecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence            99999999999998777666443 35799999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-----
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-----  273 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-----  273 (632)
                      .....   .......||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+......     
T Consensus       174 ~~~~~---~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  248 (331)
T 4aaa_A          174 LAAPG---EVYDDEVATRWYRAPELLVGD--VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH  248 (331)
T ss_dssp             -------------CCCCCTTCCHHHHTTC--TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             ecCCc---cccCCCcCCccccCcccccCC--CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhh
Confidence            53321   122345789999999998643  25788999999999999999999999998866654444321100     


Q ss_pred             ---------------CC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 ---------------PC---------IPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 ---------------p~---------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                     +.         ..+.+++++.+||.+||+.||++||++.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                           00         01357899999999999999999999999886

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.5e-39  Score=348.17  Aligned_cols=247  Identities=21%  Similarity=0.233  Sum_probs=190.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++....  ......+. ++..++..+ +||||+.+++++..
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~-~E~~~l~~l-~hpniv~~~~~~~~   95 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILE------RNVAIKKLSRPFQNQTHAKRAY-RELVLMKCV-NHKNIIGLLNVFTP   95 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEECTTSSHHHHHHHH-HHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCC------ceEEEEEeccccCChHHHHHHH-HHHHHHHhc-CCCCccceEEeecc
Confidence            378999999999999999999987665      489999997532  22222333 333444554 79999999999876


Q ss_pred             CC------EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 NG------KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~~------~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .+      .+||||||++|+|.+.+.    ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  171 (371)
T 2xrw_A           96 QKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  171 (371)
T ss_dssp             CCSTTTCCEEEEEEECCSEEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred             ccccccccceEEEEEcCCCCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEe
Confidence            54      789999999999888874    36899999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++.....    .......||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+.+..+......
T Consensus       172 g~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  244 (371)
T 2xrw_A          172 GLARTAGTS----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT  244 (371)
T ss_dssp             CC--------------------CTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCC
T ss_pred             ecccccccc----cccCCceecCCccCHHHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            999764321    122345789999999999743   6889999999999999999999999998877666655432111


Q ss_pred             C--------------------CC--------------CC------CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 P--------------------CI--------------PS------GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 p--------------------~~--------------p~------~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +                    .+              |.      ..++++.+||.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            1                    11              00      01568999999999999999999999987

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.4e-40  Score=333.11  Aligned_cols=253  Identities=23%  Similarity=0.332  Sum_probs=205.4

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|.+..... ......+.++..++..+ +|+||+.+++++.. 
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   77 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDG------KILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDR   77 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCC------cEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecC
Confidence            368999999999999999999987655      4899999975432 22223333444555555 69999999998764 


Q ss_pred             -CCEEEEEEecCCC-CHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-----ceeeeeeCCeEEEecCCcEEE
Q 006772          120 -NGKICIAMKFYEG-SVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIG-----LLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       120 -~~~l~LVmEy~~G-sL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~-----IvHRDLKP~NILld~~g~vkL  190 (632)
                       ++.+|+||||++| +|.+++....  ...+++..++.++.|++.||+|||+++     |+||||||+|||++.++.+||
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl  157 (279)
T 2w5a_A           78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL  157 (279)
T ss_dssp             GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEE
T ss_pred             CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEE
Confidence             5789999999985 8888886542  345999999999999999999999999     999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||+++.....   ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...+..++...+.. 
T Consensus       158 ~dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~-  230 (279)
T 2w5a_A          158 GDFGLARILNHD---TSFAKTFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE-  230 (279)
T ss_dssp             CCCCHHHHC------CHHHHHHHSCCTTCCHHHHHCC----CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-
T ss_pred             ecCchheeeccc---cccccccCCCccccChHHhccC---CCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh-
Confidence            999998764321   1112234689999999998743   688999999999999999999999999887777666553 


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHA  308 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~  308 (632)
                      ...+.+|..+++++.++|.+||+.||++||++.++++.
T Consensus       231 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  268 (279)
T 2w5a_A          231 GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  268 (279)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            34456788899999999999999999999999999873

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=6e-41  Score=359.37  Aligned_cols=246  Identities=15%  Similarity=0.157  Sum_probs=187.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC---chhhHHHHHHHHHHHhhhcc--CCCceeEee--
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL---KEDCAKVFVNKFEELFPKFR--ESQSVCWLH--  114 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~---~~~~~~~~~~~~~~il~~l~--~h~~I~~l~--  114 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.+.   .....+.+ .++..++..+.  +||||+.++  
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~-~~E~~~l~~l~~l~hpniv~~~~~  144 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETG------ESFEVHVPYFTERPPSNAIKQM-KEEVLRLRLLRGIKNQKQAKVHLR  144 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCC------CEEEEEEEEECC-CCTTHHHHH-HHHHHGGGGSTTCCSHHHHHHHHC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCC------cEEEEEEEeeccccchHHHHHH-HHHHHHHHhccccCCHHHHHHHhh
Confidence            478999999999999999999987654      48999999742   22222333 33333333333  799998887  


Q ss_pred             -----EEEEECC-----------------EEEEEEecCCCCHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh
Q 006772          115 -----GISVING-----------------KICIAMKFYEGSVGDRIAQQRG-----GKLPLPDILRYGIQLAKGISDLHS  167 (632)
Q Consensus       115 -----~~~~~~~-----------------~l~LVmEy~~GsL~d~l~~~~~-----~~l~~~~~~~ia~qIa~gL~yLHs  167 (632)
                           +++...+                 ..||||||+.|+|.+++.....     ..+++..++.++.||+.||+|||+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  224 (377)
T 3byv_A          145 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  224 (377)
T ss_dssp             BCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence                 6665543                 2899999999999999876421     122347888899999999999999


Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCC--------CCCCCCcccccc
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--------VRGPISFETDTW  239 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~g~~t~ksDvw  239 (632)
                      ++|+||||||+|||++.++.+||+|||+++...      ......+| +.|+|||++.+.        ....++.++|||
T Consensus       225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dvw  297 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAW  297 (377)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETT------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEechhheecC------CcccCCCC-cCccChhhhcccccccccccccccCChhhhHH
Confidence            999999999999999999999999999998532      12344578 999999998743        001588999999


Q ss_pred             hhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          240 GFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       240 SlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ||||++|||++|+.||.+.+..+....+.      ..+..+|+++.+||.+||+.||++||++.++++
T Consensus       298 SlG~il~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          298 ALGLVIYWIWCADLPITKDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHHHHHSSCCC------CCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCcccccccchhhhh------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            99999999999999998765433222211      224678999999999999999999999999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.1e-39  Score=371.76  Aligned_cols=263  Identities=21%  Similarity=0.322  Sum_probs=207.7

Q ss_pred             CcCCCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           39 WIDPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        39 ~I~~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .++.+.+.+.. .||+|+||.||+|.+....    ..+.||||+++....  ...+.+. ++..++..+ +|+||+.+++
T Consensus       364 ~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~-~E~~il~~l-~hpnIv~l~~  437 (635)
T 4fl3_A          364 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKK----VVKTVAVKILKNEANDPALKDELL-AEANVMQQL-DNPYIVRMIG  437 (635)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSS----CEEEEEEEEECGGGGCGGGHHHHH-HHHHHHHHC-CCTTBCCEEE
T ss_pred             cccchhccccCCEeccCCCEEEEEEEEcCCC----cceEEEEEEeccccCCHHHHHHHH-HHHHHHHhC-CCCCEeeEEE
Confidence            35556677755 8999999999999765322    235899999975432  2233333 344555665 6999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++. ++..+|||||++ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       438 ~~~-~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFG  514 (635)
T 4fl3_A          438 ICE-AESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG  514 (635)
T ss_dssp             EEE-SSSEEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTT
T ss_pred             EEe-cCCEEEEEEccCCCCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcC
Confidence            886 456889999998 578887754  3579999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +++.+..............||+.|+|||++..   ..++.++|||||||+||||++ |..||.+.+..++...+. ....
T Consensus       515 la~~~~~~~~~~~~~~~~~~t~~y~APE~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~  590 (635)
T 4fl3_A          515 LSKALRADENYYKAQTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGER  590 (635)
T ss_dssp             HHHHTTC-------------CGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCC
T ss_pred             CccccccCccccccccCCCCceeeeChhhhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCC
Confidence            99865432211122233456889999999963   468999999999999999998 999999999888776665 3456


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +..|..+|+++.+||.+||+.||++||++.+|++.|+.+..
T Consensus       591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            66788999999999999999999999999999999987653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.7e-39  Score=344.97  Aligned_cols=257  Identities=18%  Similarity=0.260  Sum_probs=196.8

Q ss_pred             CCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc--------
Q 006772           34 TQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR--------  105 (632)
Q Consensus        34 ~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~--------  105 (632)
                      .-....+..++|++.+.||+|+||.||+|.+..++      +.||||++..... ....+ .++..++..+.        
T Consensus        10 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~-~~~~~-~~e~~~l~~l~~~~~~~~~   81 (373)
T 1q8y_A           10 AFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNN------THVAMKIVRGDKV-YTEAA-EDEIKLLQRVNDADNTKED   81 (373)
T ss_dssp             CCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSCHH-HHHHH-HHHHHHHHHHHHTCCSHHH
T ss_pred             eecCCcccCCeEEEEEeeeecCCeEEEEEEecCCC------cEEEEEEecCCcc-chhhh-hHHHHHHHHhhcccccchh
Confidence            33444566789999999999999999999987655      4899999975332 22222 22333333333        


Q ss_pred             --CCCceeEeeEEEEECC----EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeeeeeCC
Q 006772          106 --ESQSVCWLHGISVING----KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI-GLLVLNLKPS  178 (632)
Q Consensus       106 --~h~~I~~l~~~~~~~~----~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~-~IvHRDLKP~  178 (632)
                        .|+||+.+++++...+    .++++|||+.++|.+++.......+++..++.++.||+.||+|||++ +|+||||||+
T Consensus        82 ~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~  161 (373)
T 1q8y_A           82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE  161 (373)
T ss_dssp             HHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred             ccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChH
Confidence              3789999999887654    78999999988999999876666799999999999999999999998 9999999999


Q ss_pred             eEEEecC------CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCC
Q 006772          179 NLLLSEH------DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI  252 (632)
Q Consensus       179 NILld~~------g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~  252 (632)
                      |||++.+      +.+||+|||+++....      ......||+.|+|||++.+.   .++.++|||||||++|||++|.
T Consensus       162 NIll~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~  232 (373)
T 1q8y_A          162 NVLMEIVDSPENLIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLGA---PWGCGADIWSTACLIFELITGD  232 (373)
T ss_dssp             GEEEEEEETTTTEEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHTC---CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             HeEEeccCCCcCcceEEEcccccccccCC------CCCCCCCCccccCcHHHhCC---CCCchHhHHHHHHHHHHHHhCC
Confidence            9999543      3899999999986532      22335789999999999743   6889999999999999999999


Q ss_pred             CCCCCCCH------HHHHHHHHhh----------------------------------------ccCCCCCCCCCHHHHH
Q 006772          253 QPWFGKSV------EEIYHSVVIK----------------------------------------KEKPCIPSGLPPAVEN  286 (632)
Q Consensus       253 ~PF~~~~~------~ei~~~i~~~----------------------------------------~~~p~~p~~lp~~l~~  286 (632)
                      .||.+.+.      .+....+...                                        .....++..+++++.+
T Consensus       233 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (373)
T 1q8y_A          233 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD  312 (373)
T ss_dssp             CCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHH
T ss_pred             CCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHH
Confidence            99986542      1112221110                                        0112234456778999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHH
Q 006772          287 VIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       287 LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ||.+||+.||++||++.|+++
T Consensus       313 li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          313 FLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHHHhccCccccCCHHHHhh
Confidence            999999999999999999886

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.5e-40  Score=355.19  Aligned_cols=252  Identities=16%  Similarity=0.148  Sum_probs=183.3

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhcc-CCCceeEee----
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFR-ESQSVCWLH----  114 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~-~h~~I~~l~----  114 (632)
                      ..+|++.+.||+|+||.||+|.+..++      +.||||++.....  ......+.++..++..+. .||||+.++    
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~  134 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERL------EDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLL  134 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBC
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCC------ceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEE
Confidence            356999999999999999999987665      4899999987542  222233333333233333 699977644    


Q ss_pred             ---EEEEEC-----------------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHHHhC
Q 006772          115 ---GISVIN-----------------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDI------LRYGIQLAKGISDLHSI  168 (632)
Q Consensus       115 ---~~~~~~-----------------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~------~~ia~qIa~gL~yLHs~  168 (632)
                         +++...                 ..+||||||++|+|.+++.... ..++...+      +.++.||+.||+|||++
T Consensus       135 ~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~  213 (371)
T 3q60_A          135 LPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK  213 (371)
T ss_dssp             CCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence               455443                 3489999999999999997653 24455555      67779999999999999


Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHH
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM  248 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Em  248 (632)
                      +|+||||||+|||++.++.+||+|||+++....      ......||+.|+|||++.+. ...++.++|||||||++|||
T Consensus       214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DiwSlG~il~el  286 (371)
T 3q60_A          214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT------RGPASSVPVTYAPREFLNAS-TATFTHALNAWQLGLSIYRV  286 (371)
T ss_dssp             TEEETTCSGGGEEECTTSCEEECCGGGEEETTC------EEEGGGSCGGGCCHHHHTCS-EEECCHHHHHHHHHHHHHHH
T ss_pred             CCccCcCCHHHEEECCCCCEEEEecceeeecCC------CccCccCCcCCcChhhccCC-CCCcCccccHHHHHHHHHHH
Confidence            999999999999999999999999999986522      11134567999999999642 23689999999999999999


Q ss_pred             HhCCCCCCCCCHHHH--HHH---HHhhccCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          249 LTGIQPWFGKSVEEI--YHS---VVIKKEKPCIP--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       249 ltG~~PF~~~~~~ei--~~~---i~~~~~~p~~p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ++|+.||.+......  +..   .........++  ..+++++.+||.+||+.||++||++.++++
T Consensus       287 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          287 WCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999987643210  000   00011122222  578999999999999999999999999885

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.8e-39  Score=336.17  Aligned_cols=258  Identities=19%  Similarity=0.292  Sum_probs=201.6

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccC-CCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRE-SQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~-h~~I~~l~  114 (632)
                      ..+..++|++.+.||+|+||.||+|.+.. +      +.||||++....  ...... ..++..++..+.+ |+||+.++
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~------~~vavK~~~~~~~~~~~~~~-~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNEK-K------QIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTT-C------CEEEEEEEECSSCCHHHHHH-HHHHHHHHHHHGGGCTTBCCEE
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcCC-C------cEEEEEEeccccccccchHH-HHHHHHHHHhccccCCceEEEE
Confidence            44566889999999999999999998743 2      489999996532  222233 3334455666654 79999999


Q ss_pred             EEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          115 GISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      +++..++.+|+|||+..|+|.+++...  +.+++..++.++.||+.||.|||+++|+||||||+|||+++ +.+||+|||
T Consensus        95 ~~~~~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg  171 (313)
T 3cek_A           95 DYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG  171 (313)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred             EEeecCCEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeecc
Confidence            999999999999998888999988753  57999999999999999999999999999999999999964 899999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCC--------CCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHH
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE--------VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYH  265 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~  265 (632)
                      +++....... ........||+.|+|||++.+.        ....++.++|||||||++|||++|..||.... ......
T Consensus       172 ~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  250 (313)
T 3cek_A          172 IANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH  250 (313)
T ss_dssp             SSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred             ccccccCccc-cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence            9976533211 1112345789999999998642        12367889999999999999999999998754 333444


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+........++...+.++.++|.+||+.||.+||++.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            444444556677888999999999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.8e-39  Score=341.93  Aligned_cols=259  Identities=19%  Similarity=0.241  Sum_probs=193.0

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ...++|++.+.||+|+||.||+|.+..++      +.||||++....... ....++. ..+..+ +|+||+.+++++..
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~-~~~~~~~-~~l~~l-~h~niv~~~~~~~~   90 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTG------MSVAIKKVIQDPRFR-NRELQIM-QDLAVL-HHPNIVQLQSYFYT   90 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTC------CEEEEEEEECCTTCC-CHHHHHH-HHHHHH-CCTTBCCEEEEEEE
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEecCcccc-HHHHHHH-HHHHhc-CCCCcccHHHhhhc
Confidence            44579999999999999999999987665      489999986543221 1122222 222233 79999999999876


Q ss_pred             CCE-------EEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH--hCCceeeeeeCCeEEEec-CCc
Q 006772          120 NGK-------ICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLH--SIGLLVLNLKPSNLLLSE-HDQ  187 (632)
Q Consensus       120 ~~~-------l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLH--s~~IvHRDLKP~NILld~-~g~  187 (632)
                      .+.       +++||||++|++.+.+...  ....+++..++.++.|++.||.|||  +++|+||||||+|||++. ++.
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             ECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE
T ss_pred             cccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc
Confidence            433       8999999999888776542  3467899999999999999999999  999999999999999997 899


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      +||+|||+++.....    .......||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+.+..+....+
T Consensus       171 ~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  244 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPS----EPNVAYICSRYYRAPELIFGN--QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI  244 (360)
T ss_dssp             EEECCCTTCBCCCTT----SCCCSTTSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EEEeeCCCceecCCC----CCcccccCCcceeCHHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHH
Confidence            999999999865332    122345789999999998643  34789999999999999999999999998877766655


Q ss_pred             HhhccC------------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhccc
Q 006772          268 VIKKEK------------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVY  317 (632)
Q Consensus       268 ~~~~~~------------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~  317 (632)
                      ......                              +..+...++++.+||.+||+.||.+||++.|+++      ++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~f  318 (360)
T 3e3p_A          245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC------HPYF  318 (360)
T ss_dssp             HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT------SGGG
T ss_pred             HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc------Cccc
Confidence            432111                              1122336789999999999999999999999886      5666


Q ss_pred             CC
Q 006772          318 ND  319 (632)
Q Consensus       318 ~~  319 (632)
                      ..
T Consensus       319 ~~  320 (360)
T 3e3p_A          319 DE  320 (360)
T ss_dssp             GG
T ss_pred             cc
Confidence            43

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3.2e-39  Score=329.80  Aligned_cols=248  Identities=21%  Similarity=0.349  Sum_probs=201.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------hHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------CAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|+++.....      ..+.+ .++..++..+ +|+||+.++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~~-~~E~~~l~~l-~h~~i~~~~~~   76 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTG------KEYAAKFIKKRRLSSSRRGVSREEI-EREVNILREI-RHPNIITLHDI   76 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEBCSSTTCSSSBCHHHH-HHHHHHHHHC-CCTTBCCEEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCC------CeeehHHhhhccccccccchHHHHH-HHHHHHHHhC-CCCCeeehhhe
Confidence            57999999999999999999987655      48999998754221      12333 3334455555 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC----cEEEE
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLG  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g----~vkL~  191 (632)
                      +..++..++||||++ ++|.+++...  ..+++.+++.++.||+.||+|||+++|+||||||+|||++.++    .+||+
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~  154 (283)
T 3bhy_A           77 FENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI  154 (283)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred             ecCCCeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE
Confidence            999999999999997 6888887653  4799999999999999999999999999999999999999877    89999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||++......    .......||+.|+|||++.+   ..++.++|+||||+++|+|++|..||.+.+..+....+....
T Consensus       155 dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  227 (283)
T 3bhy_A          155 DFGIAHKIEAG----NEFKNIFGTPEFVAPEIVNY---EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN  227 (283)
T ss_dssp             CCTTCEECC------------CCCGGGCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC
T ss_pred             ecccceeccCC----CcccccCCCcCccCcceecC---CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcc
Confidence            99999865332    12234568999999999874   368899999999999999999999999988877766655322


Q ss_pred             cCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKP--CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p--~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...  ..+..+++.+.++|.+||+.||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            211  122578999999999999999999999999996

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.1e-39  Score=333.64  Aligned_cols=250  Identities=21%  Similarity=0.335  Sum_probs=198.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ...++|++.+.||+|+||.||+|.+..++      +.||||.+.....  ...+.++ ..++..+ +|+||+.+++++..
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~--~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~   95 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETG------QIVAIKQVPVESD--LQEIIKE-ISIMQQC-DSPHVVKYYGSYFK   95 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTC------CEEEEEEEETTSC--CHHHHHH-HHHHHTC-CCTTBCCEEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCC------CEEEEEecCchHH--HHHHHHH-HHHHHhC-CCCCCccEEEEEEe
Confidence            34578999999999999999999987655      4899999976432  2333333 3444454 79999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+|+||||++| +|.+++.. ....+++..++.++.||+.||.|||+++|+|+||||+|||++.++.+||+|||++..
T Consensus        96 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  174 (314)
T 3com_A           96 NTDLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ  174 (314)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCEEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence            9999999999986 77777653 346899999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--CC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--CI  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--~~  276 (632)
                      .....   .......||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...+.......+.. ...+  ..
T Consensus       175 ~~~~~---~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~  247 (314)
T 3com_A          175 LTDTM---AKRNTVIGTPFWMAPEVIQEI---GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT-NPPPTFRK  247 (314)
T ss_dssp             CBTTB---SCBCCCCSCGGGCCHHHHSSS---CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCSS
T ss_pred             hhhhc---cccCccCCCCCccChhhcCCC---CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc-CCCcccCC
Confidence            53321   122345789999999998743   678899999999999999999999998876655444332 2222  23


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..++.++.++|.+||+.||.+||++.++++
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            4568999999999999999999999999886

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=8.6e-41  Score=349.22  Aligned_cols=260  Identities=20%  Similarity=0.292  Sum_probs=201.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+.. +      +.||||++........+.+.++ ..++..+ +||||+.+++++..++
T Consensus        38 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~------~~vavK~~~~~~~~~~~~~~~E-~~~l~~l-~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           38 TNNFDHKFLIGHGVFGKVYKGVLRD-G------AKVALKRRTPESSQGIEEFETE-IETLSFC-RHPHLVSLIGFCDERN  108 (321)
T ss_dssp             CCCCSCCCCSCBCSSSEEEEEECTT-C------CEEEEEECCSCCSSHHHHHHHH-HHGGGSC-CCTTBCCEEEECCCTT
T ss_pred             HhccCccceeecCCCeeEEEEEECC-C------CEEEEEEecccChHHHHHHHHH-HHHHHhC-CCCCEeeEEEEEcCCC
Confidence            3789999999999999999998642 2      4899999876654444444433 3445554 6999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          122 KICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~--~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..++||||++ |+|.+++....  ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK  188 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence            9999999998 57777765432  23589999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHH---HH---HHHhhc-
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI---YH---SVVIKK-  271 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei---~~---~i~~~~-  271 (632)
                      ...... ........||+.|+|||++.+   +.++.++|||||||++|||++|+.||.+..+.+.   ..   ...... 
T Consensus       189 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          189 GTELDQ-THLSTVVKGTLGYIDPEYFIK---GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ  264 (321)
T ss_dssp             CSSSSC-CCCBCCCEEETTTCCHHHHHH---CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred             cccccc-cccccccCCCccccCHHHhcC---CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence            432211 112234568999999999864   3688999999999999999999999986543221   00   000000 


Q ss_pred             ----cCC----CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          272 ----EKP----CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       272 ----~~p----~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                          ..+    .++..++.++.+++.+||+.||++||++.++++.|+.+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence                011    1223345689999999999999999999999999987654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4.1e-39  Score=328.40  Aligned_cols=247  Identities=23%  Similarity=0.346  Sum_probs=201.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE---
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI---  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~---  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+.......     .++..++..+ .|+||+.+++++..   
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~-----~~e~~~l~~l-~h~~i~~~~~~~~~~~~   78 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDG------KTYVIKRVKYNNEKA-----EREVKALAKL-DHVNIVHYNGCWDGFDY   78 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTC------CEEEEEEEECCSGGG-----HHHHHHHHHC-CCTTBCCEEEEEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcCCC------eEEEEEEeccccHHH-----HHHHHHHHhC-CCCCEEEEeeeEecccc
Confidence            57999999999999999999987655      489999997654321     2223444444 69999999988754   


Q ss_pred             -------------CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC
Q 006772          120 -------------NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH  185 (632)
Q Consensus       120 -------------~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~  185 (632)
                                   ...+++||||++| +|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             C---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             CcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC
Confidence                         4568999999995 89988876656789999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH
Q 006772          186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH  265 (632)
Q Consensus       186 g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~  265 (632)
                      +.+||+|||+++......    ......||+.|+|||++.+.   .++.++|+|||||++|||++|..||...  .....
T Consensus       159 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~  229 (284)
T 2a19_B          159 KQVKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQISSQ---DYGKEVDLYALGLILAELLHVCDTAFET--SKFFT  229 (284)
T ss_dssp             TEEEECCCTTCEESSCCS----CCCCCCSCCTTSCHHHHHCS---CCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHH
T ss_pred             CCEEECcchhheeccccc----cccccCCcccccChhhhccC---CCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHH
Confidence            999999999998754321    22345689999999998743   6789999999999999999999987532  12222


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+    ....++..+++++.++|.+||+.||.+||++.++++.|+.+..
T Consensus       230 ~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          230 DL----RDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HH----HTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             Hh----hcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            22    2334567899999999999999999999999999999887653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=3.2e-39  Score=371.45  Aligned_cols=265  Identities=21%  Similarity=0.364  Sum_probs=213.2

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ...+..++|++.+.||+|+||.||+|.+...+.   ....||||.+.........+...++..++..+ +||||+.++++
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~  459 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPEN---PAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGV  459 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSS---CCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCC---ccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEE
Confidence            344667899999999999999999999876442   34589999987644333333333444455555 79999999998


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +. ++..|+||||++ |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       460 ~~-~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~  537 (656)
T 2j0j_A          460 IT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  537 (656)
T ss_dssp             EC-SSSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred             Ee-cCceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCC
Confidence            74 567899999998 6888777543 45799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++.......  .......||+.|||||++.+   ..++.++|||||||++|||++ |..||.+.+..+....+.. ...+
T Consensus       538 a~~~~~~~~--~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-~~~~  611 (656)
T 2j0j_A          538 SRYMEDSTY--YKASKGKLPIKWMAPESINF---RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERL  611 (656)
T ss_dssp             CCSCCC------------CCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-TCCC
T ss_pred             CeecCCCcc--eeccCCCCCcceeCHHHhcC---CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCCC
Confidence            986533211  11223456889999999864   368899999999999999997 9999999888877766653 4556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+|..+|+++.++|.+||+.||++||++.++++.|+.+.
T Consensus       612 ~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            678899999999999999999999999999999988765

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.4e-40  Score=346.19  Aligned_cols=241  Identities=18%  Similarity=0.194  Sum_probs=197.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--------hHHHHHHHHHHHhhhccCCCceeEee
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--------CAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--------~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.+....        ....+ ..+..++..+ +|+||+.++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~-~~E~~~l~~l-~h~~Iv~~~   95 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKN------KEVVVKFIKKEKVLEDCWIEDPKLGKV-TLEIAILSRV-EHANIIKVL   95 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTT------EEEEEEEEESTTSCTTSEEEETTTEEE-EHHHHHHTTC-CCTTBCCEE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCC------cEEEEEEEehhhcccccccchHHHHHH-HHHHHHHHhC-CCCCEeeEE
Confidence            57999999999999999999987765      48999999764311        11112 2233455555 799999999


Q ss_pred             EEEEECCEEEEEEecCC-C-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          115 GISVINGKICIAMKFYE-G-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      +++..++..++||||+. | +|.+++..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~D  173 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID  173 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEee
Confidence            99999999999999996 5 77777654  35799999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+++.....    ......+||+.|+|||++.+.  ..++.++|||||||++|||++|..||.....        ....
T Consensus       174 fg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~  239 (335)
T 3dls_A          174 FGSAAYLERG----KLFYTFCGTIEYCAPEVLMGN--PYRGPELEMWSLGVTLYTLVFEENPFCELEE--------TVEA  239 (335)
T ss_dssp             CTTCEECCTT----CCBCEECSCGGGCCHHHHTTC--CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------GTTT
T ss_pred             cccceECCCC----CceeccCCCccccChhhhcCC--CCCCCcccchhHHHHHHHHHhCCCchhhHHH--------HHhh
Confidence            9999875332    223346799999999998743  1237899999999999999999999976321        1123


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....|..+++++.+||.+||+.||++||++.++++
T Consensus       240 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          240 AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            33456779999999999999999999999999987

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2.5e-40  Score=343.87  Aligned_cols=264  Identities=18%  Similarity=0.309  Sum_probs=204.3

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ..|+.++|++.+.||+|+||.||+|.+..         .||+|+++.....  ..+.+ .++..++..+ +|+||+.+++
T Consensus        28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---------~~avk~~~~~~~~~~~~~~~-~~e~~~l~~l-~h~~iv~~~~   96 (319)
T 2y4i_B           28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG---------EVAIRLIDIERDNEDQLKAF-KREVMAYRQT-RHENVVLFMG   96 (319)
T ss_dssp             SSSCCSCEECCCBCCCSSSSEEEEEEESS---------SEEEEECCCCSCCCCCCCCC-CTTGGGGTTC-CCTTBCCCCE
T ss_pred             ccCCHHHeEEeeEeccCCceEEEEEEEcC---------eEEEEEeecCCCCHHHHHHH-HHHHHHHhcC-CCCCEeEEEE
Confidence            44778999999999999999999998753         4999998653211  11111 2222334444 7999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++.+++||||++| +|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||
T Consensus        97 ~~~~~~~~~iv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg  174 (319)
T 2y4i_B           97 ACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFG  174 (319)
T ss_dssp             EEECSSCEEEECBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCS
T ss_pred             EEecCCceEEEeecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecC
Confidence            99999999999999985 67666643 345799999999999999999999999999999999999998 6899999999


Q ss_pred             CceeccCCC--CCCCccccccCCCccCCccccCCCC------CCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHH
Q 006772          195 IPYLLLGRS--LSDSDMALRLGTPNYMAPEQWEPEV------RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS  266 (632)
Q Consensus       195 lak~~~~~~--~~~~~~~~~~GT~~YmAPE~~~~~~------~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~  266 (632)
                      +++......  ..........||+.|+|||++....      ...++.++|||||||++|||++|..||.+.+..+....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  254 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ  254 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            987542211  1112223456899999999987421      23578899999999999999999999999888877766


Q ss_pred             HHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       267 i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      +.........+..++.++.++|.+||+.||++||++.++++.|+.+..
T Consensus       255 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~  302 (319)
T 2y4i_B          255 MGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK  302 (319)
T ss_dssp             HHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred             hccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            654433333345789999999999999999999999999999987653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=4.4e-39  Score=330.34  Aligned_cols=253  Identities=25%  Similarity=0.352  Sum_probs=198.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|.....||+|+||.||+|.+..++      +.||||.+........+.+.+ +..++..+ +|+||+.+++++..++.
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~-e~~~l~~l-~h~~iv~~~~~~~~~~~   93 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQ------VRIAIKEIPERDSRYSQPLHE-EIALHKHL-KHKNIVQYLGSFSENGF   93 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTC------CEEEEEEEECCCC---HHHHH-HHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCC------eEEEEEEccCCchHHHHHHHH-HHHHHHhC-CCCCEeeEeeEEEeCCc
Confidence            44445568999999999999987655      489999997654433333333 33444444 79999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEecCCceec
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~DFGlak~~  199 (632)
                      .++||||++ |+|.+++..... ..+++..++.++.||+.||+|||+++|+||||||+|||++. ++.+||+|||+++..
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~  173 (295)
T 2clq_A           94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL  173 (295)
T ss_dssp             EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred             EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence            999999997 577777765422 35678899999999999999999999999999999999997 899999999999865


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhccCCCCCC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~~~~~p~~p~  278 (632)
                      ....   .......||+.|+|||++.+. ...++.++|+|||||++|||++|..||.... ..............+.++.
T Consensus       174 ~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  249 (295)
T 2clq_A          174 AGIN---PCTETFTGTLQYMAPEIIDKG-PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE  249 (295)
T ss_dssp             CC--------CCCCCCGGGCCHHHHHHG-GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCT
T ss_pred             CCCC---CcccccCCCccccChhhhcCC-CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccc
Confidence            3321   112345789999999998643 1237889999999999999999999997643 2222223333355667788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+++++.++|.+||+.||++||++.++++
T Consensus       250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          250 SMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999999999999999886

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.9e-39  Score=344.31  Aligned_cols=260  Identities=14%  Similarity=0.184  Sum_probs=198.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhc--cCCCceeEeeEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF--RESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l--~~h~~I~~l~~~~  117 (632)
                      +..++|++.+.||+|+||.||+|.+.... +...++.||||++.+.....   +..+ ..++..+  ..|++|+.+++++
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~~~---~~~e-~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLN-DAKNKQKFVLKVQKPANPWE---FYIG-TQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC--------CCCCEEEEEESSCCHHH---HHHH-HHHHHHSCGGGGGGBCCEEEEE
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCc-ccccCcEEEEEEeCCCChhH---HHHH-HHHHHHhhhhhhhhhhhhheee
Confidence            55688999999999999999999643321 11334689999997654332   2222 2222333  2378999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---------
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQ---RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---------  184 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~---~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---------  184 (632)
                      ..++..||||||++ |+|.+++...   ....+++..++.++.||+.||+|||+++|+||||||+|||++.         
T Consensus       137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~  216 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED  216 (365)
T ss_dssp             ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC----
T ss_pred             ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccc
Confidence            99999999999998 6888888653   2467999999999999999999999999999999999999998         


Q ss_pred             --CCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH
Q 006772          185 --HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE  262 (632)
Q Consensus       185 --~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e  262 (632)
                        ++.+||+|||+|+.+.... ........+||+.|||||++.+.   .++.++|||||||++|||++|+.||.......
T Consensus       217 ~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~  292 (365)
T 3e7e_A          217 DLSAGLALIDLGQSIDMKLFP-KGTIFTAKCETSGFQCVEMLSNK---PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE  292 (365)
T ss_dssp             --CTTEEECCCTTCEEGGGSC-TTEEECCSSCTTSCCCHHHHTTC---CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE
T ss_pred             cccCCEEEeeCchhhhhhccC-CCceeeeecCCCCCCChHHhcCC---CCCccccHHHHHHHHHHHHhCCCccccCCCCc
Confidence              8999999999997653211 12233456899999999999754   58999999999999999999999996543211


Q ss_pred             HHHHHHhhccCCCCC-CCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhhhhc
Q 006772          263 IYHSVVIKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRP-LMADILHAFESSQNA  315 (632)
Q Consensus       263 i~~~i~~~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RP-s~~ell~~Le~~~~~  315 (632)
                             ......++ ...++.+.+++.+||+.+|.+|+ ++.++.+.|+.....
T Consensus       293 -------~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          293 -------CKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             -------EEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -------eeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                   01111111 23467899999999999999995 788888888776543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.4e-39  Score=342.36  Aligned_cols=257  Identities=18%  Similarity=0.268  Sum_probs=196.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh----------hHHHHHHHHHHHhhhccCCCcee
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED----------CAKVFVNKFEELFPKFRESQSVC  111 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~----------~~~~~~~~~~~il~~l~~h~~I~  111 (632)
                      .++|++.+.||+|+||.||+|.+.. +      +.||||++......          .......++..++..+ +|+||+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv   92 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSE-G------IPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNIL   92 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTT-S------CEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred             ccceEEeEEeccCCCEEEEEEECCC-C------CeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCcc
Confidence            4789999999999999999998754 2      58999998542211          1112233333455555 699999


Q ss_pred             EeeEEEEEC-----CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          112 WLHGISVIN-----GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       112 ~l~~~~~~~-----~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      .+++++...     ..+|+||||++|+|.+.+... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  171 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN  171 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC
Confidence            999998652     478999999999999988743 45799999999999999999999999999999999999999999


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHH
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS  266 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~  266 (632)
                      .+||+|||+++.....    .......||+.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+.+..+....
T Consensus       172 ~~kl~Dfg~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  245 (362)
T 3pg1_A          172 DITICDFNLAREDTAD----ANKTHYVTHRWYRAPELVMQF--KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK  245 (362)
T ss_dssp             CEEECCTTC-------------------CGGGCCHHHHTTC--TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CEEEEecCcccccccc----cccceecccceecCcHHhcCC--CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999998754221    222345789999999998742  3588999999999999999999999999887766655


Q ss_pred             HHhhccCCC------------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          267 VVIKKEKPC------------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       267 i~~~~~~p~------------------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      +......+.                              .+..+++.+.+||.+||+.||++|||+.++++      +++
T Consensus       246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~  319 (362)
T 3pg1_A          246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR------HPY  319 (362)
T ss_dssp             HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT------SGG
T ss_pred             HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc------Cch
Confidence            543211111                              12456889999999999999999999999886      556


Q ss_pred             cCC
Q 006772          317 YND  319 (632)
Q Consensus       317 ~~~  319 (632)
                      +..
T Consensus       320 f~~  322 (362)
T 3pg1_A          320 FES  322 (362)
T ss_dssp             GTT
T ss_pred             hhh
Confidence            543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=9.3e-40  Score=341.54  Aligned_cols=259  Identities=20%  Similarity=0.307  Sum_probs=197.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-------hHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-------CAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-------~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++......       .....+.++..++..+ +|+||+.+++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~   82 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTC------KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKN   82 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCC------cEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEee
Confidence            67999999999999999999987665      48999998653210       1111123333455555 7999999999


Q ss_pred             EEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc---EEEE
Q 006772          116 ISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLG  191 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~---vkL~  191 (632)
                      ++..++ .|+||||++| +|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.   +||+
T Consensus        83 ~~~~~~-~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           83 FFDAED-YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             EEESSS-EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             EEcCCc-eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence            986654 8999999985 78777753  358999999999999999999999999999999999999987664   9999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~  270 (632)
                      |||+++.....    .......||+.|+|||++.......++.++|+|||||++|+|++|..||...... .+...+.. 
T Consensus       160 Dfg~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-  234 (322)
T 2ycf_A          160 DFGHSKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS-  234 (322)
T ss_dssp             CCTTCEECCCC----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH-
T ss_pred             cCccceecccc----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh-
Confidence            99999865321    1123457899999999975322446889999999999999999999999875432 22223322 


Q ss_pred             ccCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          271 KEKPC---IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       271 ~~~p~---~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                      .....   .+..+++++.++|.+||+.||++||++.++++      ++++.+.+|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~------h~~~~~~~~  283 (322)
T 2ycf_A          235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR------HPWLQDEDM  283 (322)
T ss_dssp             TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGCCHHH
T ss_pred             CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh------CcCcCCHHH
Confidence            21111   22578999999999999999999999999886      555554443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-39  Score=349.67  Aligned_cols=264  Identities=18%  Similarity=0.241  Sum_probs=186.7

Q ss_pred             CCeEE-EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKL-KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l-~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      +.|++ .++||+|+||.||+|.++...    .++.||||++......  ..+.+ +..++..+ +|+||+.+++++..  
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~----~~~~vaiK~~~~~~~~--~~~~~-E~~~l~~l-~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGK----DDKDYALKQIEGTGIS--MSACR-EIALLREL-KHPNVISLQKVFLSHA   91 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSS----CCCCEEEEECSSSSCC--HHHHH-HHHHHHHC-CCTTBCCCCEEEEETT
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCC----CCeEEEEEEECCCCCC--HHHHH-HHHHHHhc-CCCCeeeEeeEEecCC
Confidence            34666 458999999999999976432    2358999999754322  22333 33455555 69999999999965  


Q ss_pred             CCEEEEEEecCCCCHHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE----ecCCcE
Q 006772          120 NGKICIAMKFYEGSVGDRIAQQR-------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL----SEHDQL  188 (632)
Q Consensus       120 ~~~l~LVmEy~~GsL~d~l~~~~-------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl----d~~g~v  188 (632)
                      +..+||||||++|+|.+.+....       ...+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           92 DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            67899999999999998886432       1259999999999999999999999999999999999999    678899


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-------
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-------  261 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-------  261 (632)
                      ||+|||+++...............+||+.|+|||++.+.  ..++.++|||||||++|||++|..||.+....       
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~  249 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY  249 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTC--CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCC--CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence            999999998764322222233456899999999998742  34889999999999999999999999875532       


Q ss_pred             --HHHHHHHhhccCCC------------------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHH
Q 006772          262 --EIYHSVVIKKEKPC------------------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMA  303 (632)
Q Consensus       262 --ei~~~i~~~~~~p~------------------------------------~p~~lp~~l~~LI~~cL~~DP~~RPs~~  303 (632)
                        +....+......+.                                    .....++++.+||.+||+.||.+|||+.
T Consensus       250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~  329 (405)
T 3rgf_A          250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE  329 (405)
T ss_dssp             CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred             hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence              22222221111111                                    0112367899999999999999999999


Q ss_pred             HHHHHHHhhhhcccCCCCc
Q 006772          304 DILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       304 ell~~Le~~~~~~~~~~~w  322 (632)
                      |+++      +++|....+
T Consensus       330 e~L~------hp~f~~~~~  342 (405)
T 3rgf_A          330 QAMQ------DPYFLEDPL  342 (405)
T ss_dssp             HHHT------SGGGTSSSC
T ss_pred             HHhc------ChhhccCCC
Confidence            9886      677765444

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=7.2e-39  Score=339.35  Aligned_cols=253  Identities=23%  Similarity=0.307  Sum_probs=198.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++..... ........++..++..+ +|+||+.+++++...
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   95 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSG------EKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPA   95 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCC------CEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecc
Confidence            478999999999999999999987665      4899999975332 22122223333445555 699999999998776


Q ss_pred             CE------EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          121 GK------ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       121 ~~------l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      +.      .|+||||+.|+|.+.+    ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             cccccceeEEEEeccccCCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecc
Confidence            43      5999999999877665    2369999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc--
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE--  272 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~--  272 (632)
                      +++....      ......||+.|+|||++.+.  ..++.++|+|||||++|||++|..||.+.+..+....+.....  
T Consensus       172 ~~~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~  243 (353)
T 3coi_A          172 LARHADA------EMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP  243 (353)
T ss_dssp             CTTC--------------CCSBCCSCHHHHSCC--SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBC
T ss_pred             cccCCCC------CccccccCcCcCCHHHHhCc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            9875422      22345789999999998742  3578999999999999999999999999887665554432110  


Q ss_pred             ------------------------C---CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          273 ------------------------K---PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       273 ------------------------~---p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                                              .   ...+..+++++.+||.+||+.||++||++.++++      ++++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~------hp~f~~  311 (353)
T 3coi_A          244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT------HPFFEP  311 (353)
T ss_dssp             CHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT------SGGGTT
T ss_pred             CHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc------Ccchhh
Confidence                                    1   1223567999999999999999999999999886      566643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=3.2e-39  Score=338.72  Aligned_cols=257  Identities=20%  Similarity=0.358  Sum_probs=201.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhh-ccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK-FRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~-l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|++.+.||+|+||.||+|.+.  +      +.||||++....   ...+.++. +++.. ..+|+||+.+++++...+
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~--~------~~vavK~~~~~~---~~~~~~e~-~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR--G------EEVAVKIFSSRE---ERSWFREA-EIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET--T------EEEEEEEECGGG---HHHHHHHH-HHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc--C------ccEEEEEeCchh---HHHHHHHH-HHHHHhhcCCCcEEEEEeeecccC
Confidence            68999999999999999999874  2      489999986432   23333333 33333 258999999999988765


Q ss_pred             ----EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceeeeeeCCeEEEecCCcE
Q 006772          122 ----KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH--------SIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       122 ----~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLH--------s~~IvHRDLKP~NILld~~g~v  188 (632)
                          .+|+||||++| +|.+++..   ..+++.+++.++.|++.||+|||        +++|+||||||+|||++.++.+
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~  186 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  186 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred             CccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence                89999999985 88888854   36999999999999999999999        8999999999999999999999


Q ss_pred             EEEecCCceeccCCCCC-CCccccccCCCccCCccccCCCCCC---CCCcccccchhHHHHHHHHhC----------CCC
Q 006772          189 VLGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRG---PISFETDTWGFGCSIMEMLTG----------IQP  254 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g---~~t~ksDvwSlGvvL~EmltG----------~~P  254 (632)
                      ||+|||+++........ ........||+.|+|||++.+....   .++.++|||||||++|||++|          ..|
T Consensus       187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p  266 (342)
T 1b6c_B          187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP  266 (342)
T ss_dssp             EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence            99999999876433211 0122345799999999998754211   234689999999999999999          789


Q ss_pred             CCCC-----CHHHHHHHHHhhccCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          255 WFGK-----SVEEIYHSVVIKKEKPCIPS-----GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       255 F~~~-----~~~ei~~~i~~~~~~p~~p~-----~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      |...     ....+...+......+.++.     .++..+.+||.+||+.||++||++.++++.|+.+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            8764     23444444444444455543     344689999999999999999999999999988754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.8e-39  Score=346.58  Aligned_cols=253  Identities=22%  Similarity=0.266  Sum_probs=186.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++....  ......+. ++..++..+ +|+||+.+++++..
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~-~E~~~l~~l-~hpnIv~~~~~~~~   99 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTG------LRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLLDVFTP   99 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTT------EEEEEEECSSTTSSHHHHHHHH-HHHHHHHHC-CCTTBCCCSEEECS
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCC------CEEEEEEeCccccCHHHHHHHH-HHHHHHHhC-CCCCCCcEEEEEec
Confidence            478999999999999999999987665      489999986532  22223333 333455555 59999999999865


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .      ..+|++|||+.++|.+++..   ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DF  176 (367)
T 2fst_X          100 ARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF  176 (367)
T ss_dssp             CSSGGGCCCCEEEEECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-
T ss_pred             CCccccCCeEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeec
Confidence            4      56899999998888877753   47999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++....      ......||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+..+....+......
T Consensus       177 G~a~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~  248 (367)
T 2fst_X          177 GLARHTAD------EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT  248 (367)
T ss_dssp             --------------------CCCTTCCHHHHTTC--CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred             cccccccc------cCCCcCcCcCccChHHHcCC--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            99876422      22345789999999998742  36889999999999999999999999998876655544321111


Q ss_pred             C---------------------CC--------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          274 P---------------------CI--------PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       274 p---------------------~~--------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                      +                     ..        ...+++++.+||.+||+.||.+|||+.++++      ++++..
T Consensus       249 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~------hp~~~~  317 (367)
T 2fst_X          249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA------HAYFAQ  317 (367)
T ss_dssp             CCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTT
T ss_pred             CCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc------Chhhhh
Confidence            1                     11        1356889999999999999999999999886      556543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.3e-39  Score=342.96  Aligned_cols=261  Identities=17%  Similarity=0.236  Sum_probs=209.2

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-----------------HHHHHHHHHHHhh
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-----------------AKVFVNKFEELFP  102 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-----------------~~~~~~~~~~il~  102 (632)
                      +..++|++.+.||+|+||.||+|.+  ++      +.||||++.......                 ...+ .++..++.
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~E~~~l~   98 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DN------KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF-KNELQIIT   98 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TT------EEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHH-HHHHHHHT
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CC------ceEEEEEeecccccchhhhccccchhhhHHhHHHHH-HHHHHHHH
Confidence            3457999999999999999999998  33      589999986422111                 0333 33445555


Q ss_pred             hccCCCceeEeeEEEEECCEEEEEEecCCC-CHHHH------HHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeee
Q 006772          103 KFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDR------IAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLN  174 (632)
Q Consensus       103 ~l~~h~~I~~l~~~~~~~~~l~LVmEy~~G-sL~d~------l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRD  174 (632)
                      .+ +|+||+.+++++..++..|+||||++| +|.++      +.......+++..++.++.||+.||+|||+ ++|+|||
T Consensus        99 ~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~d  177 (348)
T 2pml_X           99 DI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD  177 (348)
T ss_dssp             TC-CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCC
T ss_pred             hC-CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecC
Confidence            55 699999999999999999999999986 77776      443335789999999999999999999999 9999999


Q ss_pred             eeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCc-ccccchhHHHHHHHHhCCC
Q 006772          175 LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF-ETDTWGFGCSIMEMLTGIQ  253 (632)
Q Consensus       175 LKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~-ksDvwSlGvvL~EmltG~~  253 (632)
                      |||+|||++.++.+||+|||++......     ......||+.|+|||++.+.  ..++. ++|+|||||++|||++|..
T Consensus       178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Di~slG~il~~l~~g~~  250 (348)
T 2pml_X          178 VKPSNILMDKNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNE--SSYNGAKVDIWSLGICLYVMFYNVV  250 (348)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSC--CCEEHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CChHhEEEcCCCcEEEeccccccccccc-----cccCCCCCcCccCchhhcCC--CCCCcchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999865332     23345789999999998743  14555 9999999999999999999


Q ss_pred             CCCCCCH-HHHHHHHHhhccCCCCC-------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          254 PWFGKSV-EEIYHSVVIKKEKPCIP-------------------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       254 PF~~~~~-~ei~~~i~~~~~~p~~p-------------------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ||...+. .+....+..  ....+|                   ..+++++.+||.+||+.||.+||++.++++      
T Consensus       251 pf~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~------  322 (348)
T 2pml_X          251 PFSLKISLVELFNNIRT--KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK------  322 (348)
T ss_dssp             SSCCSSCSHHHHHHHTS--CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT------
T ss_pred             CCCCCCcHHHHHHHHhc--cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc------
Confidence            9998765 666655542  233344                   678999999999999999999999999887      


Q ss_pred             hcccCCCCcccc
Q 006772          314 NAVYNDGEWTGL  325 (632)
Q Consensus       314 ~~~~~~~~w~~~  325 (632)
                      ++++.+..|..+
T Consensus       323 hp~f~~~~~~~~  334 (348)
T 2pml_X          323 HEWLADTNIEDL  334 (348)
T ss_dssp             SGGGTTCCHHHH
T ss_pred             CccccCCCHHHH
Confidence            677777666543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=352.01  Aligned_cols=264  Identities=19%  Similarity=0.263  Sum_probs=202.9

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ..++|++.+.||+|+||.||+|.+..++      +.||||++.............++..++..+ +|+||+.+++++...
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~   79 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTG------DLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEET   79 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECT
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCC------cEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccC
Confidence            4578999999999999999999998765      489999997543222222233344555555 699999999998875


Q ss_pred             C--EEEEEEecCC-CCHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE----ecCCcEEEEe
Q 006772          121 G--KICIAMKFYE-GSVGDRIAQQRG-GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL----SEHDQLVLGD  192 (632)
Q Consensus       121 ~--~l~LVmEy~~-GsL~d~l~~~~~-~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl----d~~g~vkL~D  192 (632)
                      +  ..||||||++ |+|.+++..... ..+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+||+|
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~D  159 (396)
T 4eut_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTD  159 (396)
T ss_dssp             TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred             CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEec
Confidence            4  7899999998 577777754432 349999999999999999999999999999999999999    7778899999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCC-----CCCCCcccccchhHHHHHHHHhCCCCCCCC----CHHHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-----RGPISFETDTWGFGCSIMEMLTGIQPWFGK----SVEEI  263 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-----~g~~t~ksDvwSlGvvL~EmltG~~PF~~~----~~~ei  263 (632)
                      ||+++.....    .......||+.|+|||++.+..     ...++.++|||||||++|||++|..||...    ...++
T Consensus       160 FG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~  235 (396)
T 4eut_A          160 FGAARELEDD----EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV  235 (396)
T ss_dssp             GGGCEECCCG----GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH
T ss_pred             CCCceEccCC----CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH
Confidence            9999875332    2223457999999999985310     124678999999999999999999999742    23344


Q ss_pred             HHHHHhhccCC-----------------C------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          264 YHSVVIKKEKP-----------------C------IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       264 ~~~i~~~~~~p-----------------~------~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                      ...+.......                 .      ++..+++.+.++|.+||+.||++||++.++++.++.+.+.
T Consensus       236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             HHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            44444322110                 1      1123456889999999999999999999999988877653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=7e-39  Score=338.34  Aligned_cols=246  Identities=19%  Similarity=0.268  Sum_probs=172.7

Q ss_pred             CCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           42 PTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        42 ~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      .++|++.+ .||+|+||.||+|.++.++      +.||||++.....     ..++... ......|+||+.+++++.. 
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~-----~~~e~~~-~~~~~~h~~i~~~~~~~~~~   94 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTG------QKCALKLLYDSPK-----ARQEVDH-HWQASGGPHIVCILDVYENM   94 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEESSHH-----HHHHHHH-HHHHTTSTTBCCEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCC------CEEEEEEecCcHH-----HHHHHHH-HHHhcCCCChHHHHHHHhhc
Confidence            37799965 6999999999999998765      4899999965321     1122222 2344589999999998876 


Q ss_pred             ---CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEe
Q 006772          120 ---NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGD  192 (632)
Q Consensus       120 ---~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~D  192 (632)
                         +..++|||||++| +|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.   ++.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A           95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             ETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             cCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEec
Confidence               4568999999985 8888887655567999999999999999999999999999999999999986   45599999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH----HHH
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH----SVV  268 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~----~i~  268 (632)
                      ||+++....     .......||+.|+|||++.+   ..++.++|+|||||++|+|++|..||.+........    .+.
T Consensus       175 fg~~~~~~~-----~~~~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  246 (336)
T 3fhr_A          175 FGFAKETTQ-----NALQTPCYTPYYVAPEVLGP---EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR  246 (336)
T ss_dssp             CTTCEEC------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred             cccceeccc-----cccccCCCCcCccChhhhCC---CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhh
Confidence            999976532     12234578999999999863   367889999999999999999999998765443311    111


Q ss_pred             hhcc--CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          269 IKKE--KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       269 ~~~~--~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....  .......+++++.+||.+||+.||++||++.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1111  11222578999999999999999999999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=6.2e-39  Score=329.56  Aligned_cols=247  Identities=23%  Similarity=0.373  Sum_probs=202.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++.....  .....+.++ ..++..+ +|+||+.+++++...
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~------~~valK~~~~~~~~~~~~~~~~~e-~~~l~~l-~h~~i~~~~~~~~~~   93 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQ------QEYAVKVINKASAKNKDTSTILRE-VELLKKL-DHPNIMKLFEILEDS   93 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGBSSSCHHHHHHH-HHHHHTC-CCTTBCCEEEEEECS
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCC------cEEEEEEecccccchHHHHHHHHH-HHHHHhc-cCCCccEEEEEEeCC
Confidence            68999999999999999999987655      4899999865321  223333333 3445555 799999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC---CcEEEEecCCc
Q 006772          121 GKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH---DQLVLGDFGIP  196 (632)
Q Consensus       121 ~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~---g~vkL~DFGla  196 (632)
                      +..++||||+. ++|.+.+...  ..+++..++.++.||+.||+|||+++|+||||||+|||++.+   +.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             CeEEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            99999999997 5787877654  479999999999999999999999999999999999999764   47999999998


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      ......    .......||+.|+|||++.+    .++.++|+||||+++|+|++|..||.+.+..++...+.........
T Consensus       172 ~~~~~~----~~~~~~~~~~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T 2wei_A          172 TCFQQN----TKMKDRIGTAYYIAPEVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL  243 (287)
T ss_dssp             GTBCCC----SSCSCHHHHHTTCCHHHHTT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS
T ss_pred             eeecCC----CccccccCcccccChHHhcC----CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence            754322    12233468999999999863    4789999999999999999999999998888777766544333333


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 P--SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p--~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +  ..+++++.++|.+||+.||++||++.++++
T Consensus       244 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            3  578999999999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.9e-39  Score=334.47  Aligned_cols=255  Identities=22%  Similarity=0.279  Sum_probs=197.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      |...+.||+|+||.||+|.+.  +      +.||||++....   .......+.++..++..+ +||||+.+++++..++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~--~------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~  103 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVN--N------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGD  103 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESS--S------CEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred             cccCCccccCCCeEEEEEEEC--C------ceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCC
Confidence            445689999999999999853  2      479999986532   122233333444555555 6999999999999989


Q ss_pred             EEEEEEecCC-CCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          122 KICIAMKFYE-GSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ..++||||++ |+|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  183 (307)
T 2nru_A          104 DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS  183 (307)
T ss_dssp             SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccc
Confidence            9999999997 68888876443 357999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHH----HHHHHHhh-----
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE----IYHSVVIK-----  270 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~e----i~~~i~~~-----  270 (632)
                      .... .........||+.|+|||++.+    .++.++|+|||||++|+|++|..||.+....+    +...+...     
T Consensus       184 ~~~~-~~~~~~~~~g~~~y~aPE~~~~----~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  258 (307)
T 2nru_A          184 EKFA-QTVMTSRIVGTTAYMAPEALRG----EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIE  258 (307)
T ss_dssp             CSCS-SCEECSSCCSCGGGCCHHHHTT----EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHH
T ss_pred             cccc-ccccccccCCCcCcCChHHhcC----CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhh
Confidence            3321 1112234578999999999864    47889999999999999999999998754322    21111110     


Q ss_pred             ----ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          271 ----KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       271 ----~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                          ...+..+...+..+.+++.+||+.||.+||++.++++.|+.+.
T Consensus       259 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          259 DYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             hhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence                1111223345678999999999999999999999999998764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3.4e-39  Score=337.95  Aligned_cols=244  Identities=19%  Similarity=0.231  Sum_probs=198.0

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-----HHHHHHHHHHHhhhcc-CCCceeEee
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-----AKVFVNKFEELFPKFR-ESQSVCWLH  114 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-----~~~~~~~~~~il~~l~-~h~~I~~l~  114 (632)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||++.......     ....+..+..++..+. .|+||+.++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~  114 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDN------LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL  114 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTT------EEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCC------cEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEE
Confidence            3578999999999999999999987655      589999986532110     0011122234455554 489999999


Q ss_pred             EEEEECCEEEEEEecCC--CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-cCCcEEEE
Q 006772          115 GISVINGKICIAMKFYE--GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-EHDQLVLG  191 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~--GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-~~g~vkL~  191 (632)
                      +++..++..++||||+.  ++|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++ +++.+||+
T Consensus       115 ~~~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          115 DWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             EEEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred             EEEecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence            99999999999999997  6888888654  5799999999999999999999999999999999999999 78999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+++.....     ......||+.|+|||++.+.  ..++.++|+|||||++|||++|..||....  +    +.  .
T Consensus       193 Dfg~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~--~----~~--~  257 (320)
T 3a99_A          193 DFGSGALLKDT-----VYTDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----II--R  257 (320)
T ss_dssp             CCTTCEECCSS-----CBCCCCSCGGGSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HH--H
T ss_pred             eCccccccccc-----cccCCCCCccCCChHHhccC--CCCCccchHHhHHHHHHHHHHCCCCCCChh--h----hh--c
Confidence            99999875332     22345789999999998643  124688999999999999999999997632  1    11  2


Q ss_pred             cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....++..+++++.++|.+||+.||++||++.++++
T Consensus       258 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          258 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            344567889999999999999999999999999886

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=6e-39  Score=351.63  Aligned_cols=265  Identities=19%  Similarity=0.231  Sum_probs=193.6

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+...+|++.+.||+|+||+||.... .+      ++.||||++.+.....    ..++..++..+.+||||+.+++++.
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~-~~------~~~vAvK~~~~~~~~~----~~~E~~~l~~l~~HpnIv~l~~~~~   88 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGM-FD------NRDVAVKRILPECFSF----ADREVQLLRESDEHPNVIRYFCTEK   88 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEE-SS------SSEEEEEEECTTTEEE----CHHHHHHHHHSCCCTTBCCEEEEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEE-eC------CeEEEEEEECHHHHHH----HHHHHHHHHhccCCCCcCeEEEEEe
Confidence            34556799999999999999765432 22      2589999997643222    1233455666668999999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---C--CcEEEEec
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---H--DQLVLGDF  193 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~--g~vkL~DF  193 (632)
                      .++..||||||+.|+|.+++.... ..++..+++.++.||+.||+|||+++|+||||||+|||++.   +  ..+||+||
T Consensus        89 ~~~~~~lv~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DF  167 (432)
T 3p23_A           89 DRQFQYIAIELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF  167 (432)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred             cCCEEEEEEECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence            999999999999999999886543 35566677899999999999999999999999999999953   2  36889999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      |+++...............+||+.|+|||++.+.....++.++|||||||++|||++ |..||........... .....
T Consensus       168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~  246 (432)
T 3p23_A          168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACS  246 (432)
T ss_dssp             TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTCCC
T ss_pred             cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hccCC
Confidence            999876432222223345679999999999975445567889999999999999999 9999976654443222 11111


Q ss_pred             CCCC--CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCc
Q 006772          273 KPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEW  322 (632)
Q Consensus       273 ~p~~--p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w  322 (632)
                      ....  +...+..+.+||.+||+.||.+||++.++++      +++|...+|
T Consensus       247 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~------hp~f~~~~~  292 (432)
T 3p23_A          247 LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK------HPFFWSLEK  292 (432)
T ss_dssp             CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT------STTTCCHHH
T ss_pred             ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh------CccccChHH
Confidence            1111  1234567899999999999999999999886      555544433

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=5.4e-38  Score=322.15  Aligned_cols=258  Identities=20%  Similarity=0.266  Sum_probs=191.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE---
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI---  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~---  119 (632)
                      ++|++.+.||+|+||.||+|.+..++      +.||||++... ......+ .++..++..+ +||||+.+++++..   
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~-~~~~~~~-~~E~~~l~~l-~h~~i~~~~~~~~~~~~   76 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDS------RYYAIKKIRHT-EEKLSTI-LSEVMLLASL-NHQYVVRYYAAWLERRN   76 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEEE-HHHHHHH-HHHHHHHTTC-CCTTBCCEEEEEEECCC
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCC------eEEEEEEEecc-HHHHHHH-HHHHHHHHhc-CchHHHHHHHHHHhhcc
Confidence            57999999999999999999987655      48999998642 2222333 3333455555 69999999988765   


Q ss_pred             ----------CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          120 ----------NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       120 ----------~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                                .+..|+||||++ |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~  155 (303)
T 1zy4_A           77 FVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNV  155 (303)
T ss_dssp             CCC------CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred             hhhhhcccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCE
Confidence                      357899999998 5888887653 4568889999999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCC-----------CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCC
Q 006772          189 VLGDFGIPYLLLGRSL-----------SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG  257 (632)
Q Consensus       189 kL~DFGlak~~~~~~~-----------~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~  257 (632)
                      ||+|||+++.......           .........||+.|+|||++.+.  +.++.++|+|||||++|||++   ||..
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             EECCCCCCSCTTC-------------------------CTTSCHHHHTSC--SCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC--CCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            9999999876532110           01122345789999999998742  357899999999999999998   6654


Q ss_pred             C-CHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCC
Q 006772          258 K-SVEEIYHSVVIK--KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE  321 (632)
Q Consensus       258 ~-~~~ei~~~i~~~--~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~  321 (632)
                      . +..+....+...  ..++.++...++.+.++|.+||+.||.+||++.++++      ++++....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~  291 (303)
T 1zy4_A          231 GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN------SGWLPVKH  291 (303)
T ss_dssp             HHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH------SSCSCCCC
T ss_pred             chhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC------CCCcCCCC
Confidence            2 223333333321  1223345667889999999999999999999999987      55554433

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=326.50  Aligned_cols=246  Identities=20%  Similarity=0.238  Sum_probs=189.0

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH-----HHHHHHHHHHhhhcc---CCCce
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA-----KVFVNKFEELFPKFR---ESQSV  110 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~-----~~~~~~~~~il~~l~---~h~~I  110 (632)
                      ..-.++|++.+.||+|+||.||+|.+..++      +.||||++........     ......+..++.++.   .|+||
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i  100 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDR------LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV  100 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTC------CEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSB
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCC------eEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCe
Confidence            334578999999999999999999987655      4899999965432111     111112223333332   79999


Q ss_pred             eEeeEEEEECCEEEEEEec-CC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe-cCCc
Q 006772          111 CWLHGISVINGKICIAMKF-YE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS-EHDQ  187 (632)
Q Consensus       111 ~~l~~~~~~~~~l~LVmEy-~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld-~~g~  187 (632)
                      +.+++++..++..++|||| +. ++|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++ .++.
T Consensus       101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             CCEEEEC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTE
T ss_pred             eeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCe
Confidence            9999999988999999999 55 6888888654  4799999999999999999999999999999999999999 8899


Q ss_pred             EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 006772          188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV  267 (632)
Q Consensus       188 vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i  267 (632)
                      +||+|||+++.....     ......||+.|+|||++.+.  ...+.++|+|||||++|||++|+.||....  +    +
T Consensus       179 ~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~----~  245 (312)
T 2iwi_A          179 AKLIDFGSGALLHDE-----PYTDFDGTRVYSPPEWISRH--QYHALPATVWSLGILLYDMVCGDIPFERDQ--E----I  245 (312)
T ss_dssp             EEECCCSSCEECCSS-----CBCCCCSCTTTSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----H
T ss_pred             EEEEEcchhhhcccC-----cccccCCcccccCceeeecC--CCCCccchHHHHHHHHHHHHHCCCCCCChH--H----H
Confidence            999999999875432     23345689999999998643  123568999999999999999999997632  1    1


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .  .....++..+++++.++|.+||+.||++||++.++++
T Consensus       246 ~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          246 L--EAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             H--HTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             h--hhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1  2345577889999999999999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.2e-37  Score=338.86  Aligned_cols=252  Identities=20%  Similarity=0.262  Sum_probs=183.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|.+.+.||+|+||+||.+... +      ++.||||++....   ... ..++..++..+.+||||+.+++++..++.
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~-~------g~~vAvK~~~~~~---~~~-~~~E~~~l~~l~~HpnIv~~~~~~~~~~~   83 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSF-Q------GRPVAVKRMLIDF---CDI-ALMEIKLLTESDDHPNVIRYYCSETTDRF   83 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEES-S------SSEEEEEEEEGGG---HHH-HHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred             heeeccCeEeeCCCeEEEEEEEE-C------CeEEEEEEEcHHH---HHH-HHHHHHHHHhccCCCCcCeEEEEEecCCe
Confidence            55677889999999999876432 2      2589999986532   122 23344555666689999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC------------
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGG-----KLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH------------  185 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~-----~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~------------  185 (632)
                      +||||||++|+|.+++......     ..++..++.++.||+.||+|||+++|+||||||+|||++.+            
T Consensus        84 ~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~  163 (434)
T 2rio_A           84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAE  163 (434)
T ss_dssp             EEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred             EEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCC
Confidence            9999999999999988654211     11333467899999999999999999999999999999764            


Q ss_pred             -CcEEEEecCCceeccCCCCC-CCccccccCCCccCCccccCCC----CCCCCCcccccchhHHHHHHHHh-CCCCCCCC
Q 006772          186 -DQLVLGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPE----VRGPISFETDTWGFGCSIMEMLT-GIQPWFGK  258 (632)
Q Consensus       186 -g~vkL~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~----~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~  258 (632)
                       +.+||+|||+++........ .......+||+.|+|||++.+.    ....++.++|||||||++|||++ |..||.+.
T Consensus       164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  243 (434)
T 2rio_A          164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK  243 (434)
T ss_dssp             SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred             ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence             48999999999876432111 1122345799999999999752    12468899999999999999999 99999876


Q ss_pred             CHHHHHHHHHhhccC-CCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          259 SVEEIYHSVVIKKEK-PCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       259 ~~~ei~~~i~~~~~~-p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+.  .+...... +..+    ..+++++.+||.+||+.||.+||++.++++
T Consensus       244 ~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          244 YSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             TTHHH--HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhHH--HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            54332  22222111 1111    234588999999999999999999999885

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.8e-36  Score=313.67  Aligned_cols=225  Identities=20%  Similarity=0.283  Sum_probs=178.2

Q ss_pred             CCeEEE-eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l~-~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      ++|.+. +.||+|+||.||+|.+..++      +.||||++....     .. .++..++.+...|+||+.+++++..  
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~-----~~-~~e~~~~~~~~~h~~i~~~~~~~~~~~   84 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQ------EKFALKMLQDCP-----KA-RREVELHWRASQCPHIVRIVDVYENLY   84 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECSH-----HH-HHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCC------cEEEEEEecccH-----HH-HHHHHHHHHhccCCCchhHHhhhhhhc
Confidence            578887 78999999999999988665      489999996422     12 2223344455689999999999877  


Q ss_pred             --CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEec
Q 006772          120 --NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGDF  193 (632)
Q Consensus       120 --~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~DF  193 (632)
                        ++.+||||||++ |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.   ++.+||+||
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df  164 (299)
T 3m2w_A           85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  164 (299)
T ss_dssp             TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence              678999999998 48988887765568999999999999999999999999999999999999998   789999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh--c
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK--K  271 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~--~  271 (632)
                      |++.....                            ..++.++|+|||||++|||++|..||.+.+...........  .
T Consensus       165 g~a~~~~~----------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  216 (299)
T 3m2w_A          165 GFAKETTG----------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM  216 (299)
T ss_dssp             TTCEECTT----------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCT
T ss_pred             cccccccc----------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhh
Confidence            98864311                            23678999999999999999999999876544322111111  1


Q ss_pred             cCCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          272 EKPCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       272 ~~p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....++    ..+++++.++|.+||+.||++||++.|+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            112223    568999999999999999999999999986

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.2e-37  Score=338.81  Aligned_cols=248  Identities=14%  Similarity=0.128  Sum_probs=182.9

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhH--HHHHHHHHHHhhhccCCCce--------
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA--KVFVNKFEELFPKFRESQSV--------  110 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~il~~l~~h~~I--------  110 (632)
                      ...+|++.+.||+|+||.||+|.+..++      +.||||++........  ...+.++..++..+.+.+++        
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g------~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~  149 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETG------ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR  149 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTC
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCC------CceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcc
Confidence            3456999999999999999999988765      4899999874332221  12233333444554432211        


Q ss_pred             -------eE------eeEEEEE-----CCEEEEEEecCCCCHHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHh
Q 006772          111 -------CW------LHGISVI-----NGKICIAMKFYEGSVGDRIAQQ-----RGGKLPLPDILRYGIQLAKGISDLHS  167 (632)
Q Consensus       111 -------~~------l~~~~~~-----~~~l~LVmEy~~GsL~d~l~~~-----~~~~l~~~~~~~ia~qIa~gL~yLHs  167 (632)
                             +.      +..++..     ...++++|+++.|+|.+++...     .+..+++..++.++.||+.||+|||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  229 (413)
T 3dzo_A          150 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  229 (413)
T ss_dssp             BCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                   11      1111111     2347899999999999888532     23457888999999999999999999


Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCC-------CCCCCCcccccch
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE-------VRGPISFETDTWG  240 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-------~~g~~t~ksDvwS  240 (632)
                      ++|+||||||+|||++.++.+||+|||+++....      .....+| +.|||||++...       ....++.++||||
T Consensus       230 ~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS  302 (413)
T 3dzo_A          230 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT  302 (413)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETTE------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH
T ss_pred             CCcccCCcccceEEEecCCeEEEEeccceeecCC------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHH
Confidence            9999999999999999999999999999876432      1344578 999999998311       1335788999999


Q ss_pred             hHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       241 lGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |||++|||++|+.||.+.+..+....+.      .....+|+++.+||.+||+.||++||++.++++
T Consensus       303 lGvil~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          303 LGLAIYWIWCADLPNTDDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHHHHSSCCCCTTGGGSCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCCcchhhhHHHHH------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999998866543322221      112468899999999999999999999988875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=6.9e-36  Score=309.13  Aligned_cols=229  Identities=16%  Similarity=0.148  Sum_probs=179.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      +-.++|++.+.||+|+||.||+|.+..++      +.||||++.....   .....+.++. ..+..+ .|+||+.++++
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l-~hp~iv~~~~~   99 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALD------RQVALTFVDPQGVLPDDVLQETLSRT-LRLSRI-DKPGVARVLDV   99 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTT------EEEEEEESCTTCCSCHHHHHHHHHHH-HHHHTC-CCTTBCCEEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCC------ceEEEEEECcccccCHHHHHHHHHHH-HHHhcC-CCCCcceeeEE
Confidence            33467999999999999999999987655      5899999976432   2223344433 334444 79999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +..++..||||||++ ++|.+++.+    .....++..++.||+.||+|||++||+||||||+|||++.+|.+||+++| 
T Consensus       100 ~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-  174 (286)
T 3uqc_A          100 VHTRAGGLVVAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-  174 (286)
T ss_dssp             EEETTEEEEEEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-
T ss_pred             EEECCcEEEEEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-
Confidence            999999999999998 477777632    24666789999999999999999999999999999999999999998544 


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH---HHHhhcc
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH---SVVIKKE  272 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~---~i~~~~~  272 (632)
                                            |++          +++.++|||||||++|||++|+.||.+.+..+...   .......
T Consensus       175 ----------------------~~~----------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~  222 (286)
T 3uqc_A          175 ----------------------TMP----------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP  222 (286)
T ss_dssp             ----------------------CCT----------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCB
T ss_pred             ----------------------ccC----------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCC
Confidence                                  232          36789999999999999999999998865432110   0000000


Q ss_pred             CC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          273 KP--CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       273 ~p--~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+  ..+..+|+++.++|.+||+.||++| |+.|+++.|+.+..
T Consensus       223 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          223 IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            00  1236789999999999999999999 99999999987653

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.8e-35  Score=339.72  Aligned_cols=241  Identities=21%  Similarity=0.276  Sum_probs=186.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++.+.||+|+||.||+|.+....     ++.||||++..............+..++..+ +||||+.+++++...+
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~  152 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVN-----GRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTD  152 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGT-----TEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEEC
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCC-----CcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecC
Confidence            478999999999999999999987522     2589999987544333333334444555555 6999999999998765


Q ss_pred             E-----EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          122 K-----ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       122 ~-----l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .     .||||||++| +|.+.+.    ..+++.+++.++.||+.||+|||+++|+||||||+|||++.+ .+||+|||+
T Consensus       153 ~~~~~~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          153 RHGDPVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             TTSCEEEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             CCCCceeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEeccc
Confidence            4     7999999986 5555432    379999999999999999999999999999999999999985 999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      ++.....       ....||+.|||||++.+    .++.++|||||||+||+|++|..||.+.....         ....
T Consensus       228 a~~~~~~-------~~~~gt~~y~aPE~~~~----~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------~~~~  287 (681)
T 2pzi_A          228 VSRINSF-------GYLYGTPGFQAPEIVRT----GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG---------LPED  287 (681)
T ss_dssp             CEETTCC-------SCCCCCTTTSCTTHHHH----CSCHHHHHHHHHHHHHHHHSCCCEETTEECSS---------CCTT
T ss_pred             chhcccC-------CccCCCccccCHHHHcC----CCCCceehhhhHHHHHHHHhCCCCCccccccc---------cccc
Confidence            9865321       34579999999999864    34889999999999999999999987532110         0000


Q ss_pred             C-CCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhhh
Q 006772          276 I-PSGLPPAVENVIIGCFEYDLRNRP-LMADILHAFESSQ  313 (632)
Q Consensus       276 ~-p~~lp~~l~~LI~~cL~~DP~~RP-s~~ell~~Le~~~  313 (632)
                      . ....++.+.++|.+||+.||++|| +++++.+.|....
T Consensus       288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            0 012457899999999999999999 5666777776554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.4e-35  Score=311.90  Aligned_cols=239  Identities=12%  Similarity=0.142  Sum_probs=178.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--------hhHHHHHHHHHHHhhhcc-----
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--------DCAKVFVNKFEELFPKFR-----  105 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--------~~~~~~~~~~~~il~~l~-----  105 (632)
                      .+..++|++.+.||+|+||+||+|++.  +      +.||||++.....        ...+.+.++ ..++..+.     
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~--~------~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E-~~~l~~l~~l~~~   86 (336)
T 2vuw_A           16 CLPTEKLQRCEKIGEGVFGEVFQTIAD--H------TPVAIKIIAIEGPDLVNGSHQKTFEEILPE-IIISKELSLLSGE   86 (336)
T ss_dssp             HSCHHHHHTCEEEEEETTEEEEEEEET--T------EEEEEEEEEESCSSCBTTBCCBCHHHHHHH-HHHHHHHHHGGGC
T ss_pred             hcccccchheeeecccCceEEEEEEeC--C------ceEEEEEEecCCccccccccchhHHHHHHH-HHHHHHHHHhhcc
Confidence            355688999999999999999999873  2      5899999975421        111233332 23334443     


Q ss_pred             ---CCCceeEeeEEEE------------------------------ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHH
Q 006772          106 ---ESQSVCWLHGISV------------------------------INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDI  151 (632)
Q Consensus       106 ---~h~~I~~l~~~~~------------------------------~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~  151 (632)
                         .|+||+.+.+++.                              .++.+||||||++ |++++.+.+   +.+++..+
T Consensus        87 ~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~  163 (336)
T 2vuw_A           87 VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATA  163 (336)
T ss_dssp             SSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHH
T ss_pred             ccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHH
Confidence               5888888877654                              2678999999997 456666632   57899999


Q ss_pred             HHHHHHHHHHHHHHH-hCCceeeeeeCCeEEEecCC--------------------cEEEEecCCceeccCCCCCCCccc
Q 006772          152 LRYGIQLAKGISDLH-SIGLLVLNLKPSNLLLSEHD--------------------QLVLGDFGIPYLLLGRSLSDSDMA  210 (632)
Q Consensus       152 ~~ia~qIa~gL~yLH-s~~IvHRDLKP~NILld~~g--------------------~vkL~DFGlak~~~~~~~~~~~~~  210 (632)
                      +.++.||+.||+||| +++|+||||||+|||++.++                    .+||+|||+|+....        .
T Consensus       164 ~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~  235 (336)
T 2vuw_A          164 KSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------G  235 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------T
T ss_pred             HHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------C
Confidence            999999999999999 99999999999999999987                    999999999987532        2


Q ss_pred             cccCCCccCCccccCCCCCCCCCcccccchhHHH-HHHHHhCCCCCCCCCH-HHHHHHHHhhccCC-C----CCCCCCHH
Q 006772          211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS-IMEMLTGIQPWFGKSV-EEIYHSVVIKKEKP-C----IPSGLPPA  283 (632)
Q Consensus       211 ~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvv-L~EmltG~~PF~~~~~-~ei~~~i~~~~~~p-~----~p~~lp~~  283 (632)
                      ..+||+.|||||++.+.    .+.++|||||+++ .+++++|..||.+... ......+....... .    .+..++++
T Consensus       236 ~~~gt~~y~aPE~~~g~----~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  311 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTGD----GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRK  311 (336)
T ss_dssp             EEECCCCTTCSGGGCCC----SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred             cEEEeecccChhhhcCC----CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHH
Confidence            34799999999999754    3789999998777 7778889999854211 11222222111111 1    12347889


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHH
Q 006772          284 VENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       284 l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                      +.+||.+||++|     |+.|++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHH
Confidence            999999999987     888887

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=2e-35  Score=338.34  Aligned_cols=251  Identities=21%  Similarity=0.241  Sum_probs=187.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.............++..++..+ +||||+.+++++..  
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg------~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~   85 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTG------EQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQ   85 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTT------CCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCC------cEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccc
Confidence            478999999999999999999887655      489999987643333333334444555665 79999999888654  


Q ss_pred             ----CCEEEEEEecCC-CCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc---EEE
Q 006772          120 ----NGKICIAMKFYE-GSVGDRIAQQR-GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ---LVL  190 (632)
Q Consensus       120 ----~~~l~LVmEy~~-GsL~d~l~~~~-~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~---vkL  190 (632)
                          ++..|+||||++ |+|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.   +||
T Consensus        86 ~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEE
Confidence                677899999997 58888776532 236899999999999999999999999999999999999997765   999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH-----
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH-----  265 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~-----  265 (632)
                      +|||+++.....    .......||+.|+|||++.+   ..++.++|+|||||++|||++|..||.+......+.     
T Consensus       166 ~DFG~a~~~~~~----~~~~~~~gt~~Y~APE~l~~---~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~  238 (676)
T 3qa8_A          166 IDLGYAKELDQG----ELCTEFVGTLQYLAPELLEQ---KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE  238 (676)
T ss_dssp             CSCCCCCBTTSC----CCCCCCCSCCTTCSSCSSCC---SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-
T ss_pred             cccccccccccc----cccccccCCcccCChHHhcc---CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc
Confidence            999999865332    12234578999999999874   468899999999999999999999997653221100     


Q ss_pred             ----HHHhh---cc------C----CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 006772          266 ----SVVIK---KE------K----PCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL  306 (632)
Q Consensus       266 ----~i~~~---~~------~----p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell  306 (632)
                          .+...   ..      .    ..++..+++.+.++|.+||+.||++||++.+++
T Consensus       239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence                00000   00      0    012233678999999999999999999998755

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=9.1e-29  Score=280.08  Aligned_cols=188  Identities=11%  Similarity=-0.018  Sum_probs=125.0

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc------h---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK------E---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~------~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ..++.|++|.+..++....+      ..||+|++.+..      .   ....+.+.++.+++.++.+|+||+.+++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg------~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed  313 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFG------EDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN  313 (569)
T ss_dssp             CC-C--------CCEEEEEC------SSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC
T ss_pred             hccccCCccccccccccccc------ceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE
Confidence            34556666666655544333      479999996531      1   11122244455778888899999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+||||||++| +|.+++.+  +++++..   .|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.
T Consensus       314 ~~~~yLVMEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~  388 (569)
T 4azs_A          314 AQSGWLVMEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVT  388 (569)
T ss_dssp             SSEEEEEEECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred             CCEEEEEEecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCee
Confidence            9999999999996 78888754  3567654   4789999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP  254 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P  254 (632)
                      ....   .....+.+||+.|||||++.+    .+..++|+||+|+++++|.++..+
T Consensus       389 ~~~~---~~~~~t~vGTp~YmAPE~l~g----~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          389 TPQD---CSWPTNLVQSFFVFVNELFAE----NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHC---------------------CCCCTTHHH
T ss_pred             CCCC---CccccCceechhhccHHHhCC----CCCCcccccccccchhhhccccch
Confidence            5432   223455789999999999864    466789999999998887665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.89  E-value=1.7e-24  Score=243.71  Aligned_cols=189  Identities=16%  Similarity=0.122  Sum_probs=134.1

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhH-----HHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCA-----KVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~-----~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ...+.||+|+||.||+|....        +.+++|.......  ...     .+.+.++..++.++ +|+||+.+..++.
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~  409 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLD--------FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDV  409 (540)
T ss_dssp             ---------CCEEEEEEECSS--------CEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECC--------CeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEE
Confidence            335789999999999995332        4789998754321  111     11123344555665 7899996666666


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++..||||||++ |+|.+++..          ++.++.|++.||+|||+++|+||||||+|||++.  .+||+|||+++
T Consensus       410 ~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~  477 (540)
T 3en9_A          410 DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGK  477 (540)
T ss_dssp             ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCE
T ss_pred             eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCE
Confidence            7888899999998 677776643          5689999999999999999999999999999999  99999999998


Q ss_pred             eccCCCCCCC----ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCC
Q 006772          198 LLLGRSLSDS----DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF  256 (632)
Q Consensus       198 ~~~~~~~~~~----~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~  256 (632)
                      ..........    .....+||+.|||||++... ...|+..+|+||..+-..+...++.+|.
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~-~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERF-LEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHH-HHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             ECCCccccccchhhhhhhhcCCCCcCCHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            7633210000    11346899999999999752 1247788999999999888888777663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.83  E-value=9.9e-21  Score=195.66  Aligned_cols=143  Identities=13%  Similarity=0.059  Sum_probs=104.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-----------------hHHHHHHHHHHHhhhccCC
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-----------------CAKVFVNKFEELFPKFRES  107 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-----------------~~~~~~~~~~~il~~l~~h  107 (632)
                      |.+.+.||+|+||.||+|.+ .++      +.||||+++.....                 .......++..++..+. |
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g------~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~  163 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKF------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G  163 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTT------EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T
T ss_pred             EEecCEeccCCCceEEEEEe-CCC------CEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C
Confidence            33449999999999999998 443      48999999643211                 01222334445566665 3


Q ss_pred             CceeEeeEEEEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC
Q 006772          108 QSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD  186 (632)
Q Consensus       108 ~~I~~l~~~~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g  186 (632)
                      .++   ..++.. +..|+||||++| +|.+ +        .......++.|++.||+|||+++|+||||||+|||++ ++
T Consensus       164 ~~v---~~~~~~-~~~~lvmE~~~g~~L~~-l--------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~  229 (282)
T 1zar_A          164 LAV---PKVYAW-EGNAVLMELIDAKELYR-V--------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE  229 (282)
T ss_dssp             SSS---CCEEEE-ETTEEEEECCCCEEGGG-C--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT
T ss_pred             CCc---CeEEec-cceEEEEEecCCCcHHH-c--------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC
Confidence            333   333333 456999999986 6655 3        1234557999999999999999999999999999999 99


Q ss_pred             cEEEEecCCceeccCCCCCCCccccccCCCccCCccccC
Q 006772          187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE  225 (632)
Q Consensus       187 ~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~  225 (632)
                      .+||+|||+|+.                +..|+|||++.
T Consensus       230 ~vkl~DFG~a~~----------------~~~~~a~e~l~  252 (282)
T 1zar_A          230 GIWIIDFPQSVE----------------VGEEGWREILE  252 (282)
T ss_dssp             EEEECCCTTCEE----------------TTSTTHHHHHH
T ss_pred             cEEEEECCCCeE----------------CCCCCHHHHHH
Confidence            999999998863                44578999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.75  E-value=2.1e-18  Score=175.55  Aligned_cols=138  Identities=17%  Similarity=0.129  Sum_probs=96.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccE--EEEEEecCCchh-----------------------hHHHHHHHHHH
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHE--LAVKMLLPLKED-----------------------CAKVFVNKFEE   99 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~--VAIK~l~~~~~~-----------------------~~~~~~~~~~~   99 (632)
                      |++.+.||+|+||.||+|.+..++      +.  ||||+++.....                       ........+..
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  122 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDG------KPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFR  122 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETT------EEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCC------cEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHH
Confidence            789999999999999999985433      47  999997543211                       01112233334


Q ss_pred             HhhhccCCC-ceeEeeEEEEECCEEEEEEecCC--C----CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCce
Q 006772          100 LFPKFRESQ-SVCWLHGISVINGKICIAMKFYE--G----SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH-SIGLL  171 (632)
Q Consensus       100 il~~l~~h~-~I~~l~~~~~~~~~l~LVmEy~~--G----sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLH-s~~Iv  171 (632)
                      ++..+.++. +++.++..    +..+|||||+.  |    +|.+....     .++.++..++.|++.||.||| +.+|+
T Consensus       123 ~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~giv  193 (258)
T 1zth_A          123 NLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELV  193 (258)
T ss_dssp             HHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             HHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            444543221 12222221    24689999994  3    44443321     235578899999999999999 99999


Q ss_pred             eeeeeCCeEEEecCCcEEEEecCCceec
Q 006772          172 VLNLKPSNLLLSEHDQLVLGDFGIPYLL  199 (632)
Q Consensus       172 HRDLKP~NILld~~g~vkL~DFGlak~~  199 (632)
                      ||||||+|||++.  .++|+|||+|...
T Consensus       194 HrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          194 HADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             eCCCCHHHEEEcC--cEEEEECcccccC
Confidence            9999999999998  9999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.59  E-value=1.6e-15  Score=163.24  Aligned_cols=136  Identities=15%  Similarity=0.118  Sum_probs=89.8

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--------------hhHHH-------HHHHHHHHhhh
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--------------DCAKV-------FVNKFEELFPK  103 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--------------~~~~~-------~~~~~~~il~~  103 (632)
                      |++.++||.|+||.||+|.+..       ++.||||+++....              .....       ...++...+.+
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~-------G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r  169 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEK-------GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA  169 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTT-------CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECCC-------CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999998643       35899999754210              00000       01112223333


Q ss_pred             ccCCCceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       104 l~~h~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                      +. +.++....-+....  .+|||||++|..+..+       ...++...++.||+.+|.|||+.|||||||||.|||++
T Consensus       170 L~-~~gv~vp~p~~~~~--~~LVME~i~G~~L~~l-------~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          170 LY-EEGFPVPEPIAQSR--HTIVMSLVDALPMRQV-------SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIR  239 (397)
T ss_dssp             HH-HTTCSCCCEEEEET--TEEEEECCSCEEGGGC-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             HH-hcCCCCCeeeeccC--ceEEEEecCCccHhhh-------cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEe
Confidence            32 22222111122222  3799999998433221       12334567889999999999999999999999999999


Q ss_pred             cCC----------cEEEEecCCce
Q 006772          184 EHD----------QLVLGDFGIPY  197 (632)
Q Consensus       184 ~~g----------~vkL~DFGlak  197 (632)
                      ++|          .+.|+||+-+-
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCE
T ss_pred             CCCCcccccccccceEEEEeCCcc
Confidence            877          48999999553

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.11  E-value=2.4e-10  Score=115.03  Aligned_cols=140  Identities=13%  Similarity=0.003  Sum_probs=100.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ..|++...++.|+++.||++...        ++.+++|+........... +..+..++..+..+..++.+++++...+.
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--------~~~~vlK~~~~~~~~~~~~-~~~E~~~l~~l~~~~~vP~v~~~~~~~~~   84 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--------NENLYLKMTDSRYKGTTYD-VEREKDMMLWLEGKLPVPKVLHFERHDGW   84 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--------SCEEEEEEECGGGTTSTTC-HHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--------CCcEEEEeCCcccCCCHHH-HHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence            36899999999999999999642        1479999986421111112 23333455555445667788888888899


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-----------------------------------  167 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-----------------------------------  167 (632)
                      .|+||||++|..+....      .+......++.+++.+|..||+                                   
T Consensus        85 ~~lv~e~i~G~~l~~~~------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T 3tm0_A           85 SNLLMSEADGVLCSEEY------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEEECCSSEEHHHHC------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred             eEEEEEecCCeehhhcc------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence            99999999985443221      1223345788899999999998                                   


Q ss_pred             ------------------------CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 ------------------------IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ------------------------~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                                              ..++|+|++|.|||+++++.+.|+||+.+.
T Consensus       159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                    448999999999999876566799999654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.92  E-value=2.3e-09  Score=106.68  Aligned_cols=135  Identities=10%  Similarity=-0.026  Sum_probs=88.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc-eeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS-VCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~-I~~l~~~~~~~~  121 (632)
                      ..+.+....+.|..+.||++... ++      ..+++|+.......   . ...+..++..+.++.. ++.++.+...++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~-~g------~~~vlK~~~~~~~~---~-~~~E~~~l~~l~~~~~~vP~~~~~~~~~~   88 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQ-GR------PVLFVKTDLSGALN---E-LQDEAARLSWLATTGVPCAAVLDVVTEAG   88 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECT-TS------CCEEEEEECSCTTS---C-HHHHHHHHHHHHTTTCCBCCEEEEEECSS
T ss_pred             CCCceEecccCCCCceEEEEecC-CC------CeEEEEeCCcccch---h-hhHHHHHHHHHHhCCCCCCeEEEeccCCC
Confidence            35665544446667999998642 11      36999997653211   1 2223334444444433 556777777777


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--------------------------------  169 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--------------------------------  169 (632)
                      ..++||||++|..++ ..     ...   ...++.+++..|..||+..                                
T Consensus        89 ~~~~v~e~i~G~~l~-~~-----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (264)
T 1nd4_A           89 RDWLLLGEVPGQDLL-SS-----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLD  159 (264)
T ss_dssp             CEEEEEECCSSEETT-TS-----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCC
T ss_pred             CCEEEEEecCCcccC-cC-----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhh
Confidence            899999999984333 11     111   2356677777888888643                                


Q ss_pred             --------------------------ceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          170 --------------------------LLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       170 --------------------------IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                                                ++|+|++|.|||+++++.+.|+||+.+.
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          160 EEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             GGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                      9999999999999877667799999764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.81  E-value=7.7e-09  Score=109.25  Aligned_cols=140  Identities=11%  Similarity=0.120  Sum_probs=95.2

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEec--CCchhhHHHHHHHHHHHhhhccC-CCceeEeeEEEEEC---
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELFPKFRE-SQSVCWLHGISVIN---  120 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~--~~~~~~~~~~~~~~~~il~~l~~-h~~I~~l~~~~~~~---  120 (632)
                      -.+.|+.|.++.||+.....        ..+++|+..  +............+..++..+.. ...++.++.++...   
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~--------~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~  113 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG--------QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVI  113 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS--------CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTT
T ss_pred             eEEEcCCcccceEEEEEECC--------ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCcc
Confidence            36779999999999987532        368888875  32211112223334444444443 23466677766655   


Q ss_pred             CEEEEEEecCCCCHH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------
Q 006772          121 GKICIAMKFYEGSVG-DRIAQQRGGKLPLPDILRYGIQLAKGISDLHS--------------------------------  167 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~-d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs--------------------------------  167 (632)
                      +..|+||||++|... +.    .-..++..+...++.+++..|..||+                                
T Consensus       114 g~~~~vme~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (359)
T 3dxp_A          114 GRAFYIMEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS  189 (359)
T ss_dssp             SSCEEEEECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence            458999999998432 21    11346788888999999999999997                                


Q ss_pred             --------------------------CCceeeeeeCCeEEEecCCc--EEEEecCCcee
Q 006772          168 --------------------------IGLLVLNLKPSNLLLSEHDQ--LVLGDFGIPYL  198 (632)
Q Consensus       168 --------------------------~~IvHRDLKP~NILld~~g~--vkL~DFGlak~  198 (632)
                                                ..++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                      35899999999999997753  68999998865

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.62  E-value=1.1e-08  Score=105.58  Aligned_cols=186  Identities=13%  Similarity=0.096  Sum_probs=110.4

Q ss_pred             eEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc--eeEeeEEEEECC---EE
Q 006772           49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS--VCWLHGISVING---KI  123 (632)
Q Consensus        49 ~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~--I~~l~~~~~~~~---~l  123 (632)
                      +.++.|.+..||+..           ..+++|+....  .. ......+..++..+..+..  ++.+......++   ..
T Consensus        26 ~~~~~G~~n~v~~v~-----------~~~vlR~~~~~--~~-~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~   91 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----------RDFIFKFPKHS--RG-STNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMS   91 (304)
T ss_dssp             CEEEECSSEEEEEST-----------TSEEEEEESSH--HH-HHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCS
T ss_pred             EecCCCCcceEEEEC-----------CEEEEEecCCc--ch-HHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcc
Confidence            458999999999863           25899986432  11 2223334445544433322  233333322222   35


Q ss_pred             EEEEecCCCCHH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------
Q 006772          124 CIAMKFYEGSVG-DRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-----------------------------------  167 (632)
Q Consensus       124 ~LVmEy~~GsL~-d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-----------------------------------  167 (632)
                      |+||++++|..+ +...    ..++..+...++.+++..|..||+                                   
T Consensus        92 ~~vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (304)
T 3sg8_A           92 FAGFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG  167 (304)
T ss_dssp             CEEEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred             eEEEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence            889999998433 2222    256777888888888888888886                                   


Q ss_pred             -----------------------CCceeeeeeCCeEEEec--CCcEEEEecCCceeccCCCCCCCccccccCCCccCCcc
Q 006772          168 -----------------------IGLLVLNLKPSNLLLSE--HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE  222 (632)
Q Consensus       168 -----------------------~~IvHRDLKP~NILld~--~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE  222 (632)
                                             ..++|+|++|.|||++.  .+.+.|+||+.+......    .+.........-..|+
T Consensus       168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~----~Dl~~~~~~~~~~~~~  243 (304)
T 3sg8_A          168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD----NDFISLMEDDEEYGME  243 (304)
T ss_dssp             HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT----HHHHTTCCTTTSCCHH
T ss_pred             ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH----HHHHHHHhhccccCHH
Confidence                                   13699999999999998  456789999988654211    0000000000001222


Q ss_pred             ccCC--CCCC---------CCCcccccchhHHHHHHHHhCCCCCC
Q 006772          223 QWEP--EVRG---------PISFETDTWGFGCSIMEMLTGIQPWF  256 (632)
Q Consensus       223 ~~~~--~~~g---------~~t~ksDvwSlGvvL~EmltG~~PF~  256 (632)
                      ....  ..++         ......+.|+++.++|.+.+|..+|.
T Consensus       244 ~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          244 FVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            1110  0000         11223689999999999999988763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.10  E-value=4.4e-05  Score=76.51  Aligned_cols=139  Identities=14%  Similarity=-0.002  Sum_probs=84.9

Q ss_pred             CeEEEeEEcccCce-EEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           44 SLKLKHRIGRGPFG-DVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        44 ~y~l~~~IG~G~FG-~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .|+.. .+..|..| .||+......+      +.+.+|+-....    ...+..+...+..+..+--+..++.++..++.
T Consensus        26 g~~~~-~~~~G~S~~~v~rl~~~~~~------~~~~lk~~~~~~----~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~   94 (272)
T 4gkh_A           26 GYRWA-RDNVGQSGATIYRLYGKPNA------PELFLKHGKGSV----ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDD   94 (272)
T ss_dssp             TCEEE-EEECSSSSCEEEEEECCTTC------CCEEEEEEETHH----HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             CCeEE-EccCCCcCCeEEEEEecCCC------eEEEEEECCCCC----HhHHHHHHHHHHHhccCCCcCeEEEEEEECCe
Confidence            34543 45556555 68987654332      468899865321    22233333444444333335667778888999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI----------------------------------  168 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~----------------------------------  168 (632)
                      .|+|||+++|.........     .......+..+++..|.-||+.                                  
T Consensus        95 ~~lvme~l~G~~~~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (272)
T 4gkh_A           95 AWLLTTAIPGKTAFQVLEE-----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDD  169 (272)
T ss_dssp             EEEEEECCCSEEHHHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCG
T ss_pred             EEEEEEeeCCccccccccC-----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccc
Confidence            9999999998433222111     1122233445555555555531                                  


Q ss_pred             ------------------------CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          169 ------------------------GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       169 ------------------------~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                                              .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       170 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          170 ERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             GGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                                    158999999999999877778999997643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.98  E-value=7.7e-05  Score=77.05  Aligned_cols=134  Identities=18%  Similarity=0.195  Sum_probs=81.7

Q ss_pred             EeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCC-C-ceeEeeEEEE-ECCEEE
Q 006772           48 KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRES-Q-SVCWLHGISV-INGKIC  124 (632)
Q Consensus        48 ~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h-~-~I~~l~~~~~-~~~~l~  124 (632)
                      .+.++.|....||+.     +      ..+++|+-..  .. .......+..++..+.++ + .++....++. ..+..|
T Consensus        24 v~~l~~G~~n~v~~v-----g------~~~VlR~~~~--~~-~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~   89 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----N------GDWVFRFPKS--QQ-GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPF   89 (306)
T ss_dssp             EEEEEECSSEEEEEE-----T------TTEEEEEESS--HH-HHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEE
T ss_pred             eeecCCCcceeEEEE-----C------CEEEEEecCC--ch-HHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceE
Confidence            345788888999987     1      2588887422  22 223344444555555443 2 2444444443 356678


Q ss_pred             EEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 006772          125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI------------------------------------  168 (632)
Q Consensus       125 LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~------------------------------------  168 (632)
                      ++|||++|..+....-   ..++..+...++.+++..|..||+.                                    
T Consensus        90 ~v~e~i~G~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~  166 (306)
T 3tdw_A           90 VGYRKVQGQILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE  166 (306)
T ss_dssp             EEEECCCSEECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred             EEEeccCCeECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence            9999999843332110   1234445555555555555555532                                    


Q ss_pred             ------------------------CceeeeeeCCeEEEec---CCc-EEEEecCCcee
Q 006772          169 ------------------------GLLVLNLKPSNLLLSE---HDQ-LVLGDFGIPYL  198 (632)
Q Consensus       169 ------------------------~IvHRDLKP~NILld~---~g~-vkL~DFGlak~  198 (632)
                                              .++|+|++|.|||++.   ++. +.|+||+.+..
T Consensus       167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                    3599999999999997   455 58999997654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.70  E-value=0.00045  Score=71.11  Aligned_cols=30  Identities=23%  Similarity=0.217  Sum_probs=27.2

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..++|+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999888899999999764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.68  E-value=6.3e-05  Score=80.24  Aligned_cols=30  Identities=20%  Similarity=0.254  Sum_probs=25.6

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..++|+|+.|.|||++.+ .++|+||..+..
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            569999999999999875 489999987654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.39  E-value=9.3e-05  Score=77.50  Aligned_cols=30  Identities=17%  Similarity=0.173  Sum_probs=25.3

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ..++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            468999999999999964457899999764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.08  E-value=0.0039  Score=61.52  Aligned_cols=138  Identities=11%  Similarity=-0.013  Sum_probs=91.9

Q ss_pred             CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCcccc
Q 006772          133 SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL  211 (632)
Q Consensus       133 sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~  211 (632)
                      +|.+.+. ..+.+++++++|.++.|.+.+|.-+-. +.-..+=+.|..|++..+|.+.+.+ ..+.              
T Consensus        34 SL~eIL~-~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------   97 (229)
T 2yle_A           34 SLEEILR-LYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------   97 (229)
T ss_dssp             EHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             cHHHHHH-HcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------------
Confidence            5666665 456899999999999999999877621 1112333457999999999998864 2110              


Q ss_pred             ccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006772          212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGC  291 (632)
Q Consensus       212 ~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~c  291 (632)
                       .....+.+||...    ...+.+.=|||||++||..+-=                   +.++..+..+|++|.+||..|
T Consensus        98 -~~~~~~~~pe~~~----~~~te~~~IysLG~tLY~ALDy-------------------gL~e~eE~eLS~~LE~LL~~M  153 (229)
T 2yle_A           98 -AGEPPPVAGKLGY----SQCMETEVIESLGIIIYKALDY-------------------GLKENEERELSPPLEQLIDHM  153 (229)
T ss_dssp             ----------CCSS----SSSCHHHHHHHHHHHHHHHHTT-------------------TCCTTEEECCCHHHHHHHHHH
T ss_pred             -ccccCCCChhhcc----ccchHHHHHHHHHHHHHHHhhc-------------------CCCcccchhhCHHHHHHHHHH
Confidence             0123466888763    2356788899999999987742                   222334568999999999999


Q ss_pred             hhcC-------------------------cCCCCCHHHHHHHHH
Q 006772          292 FEYD-------------------------LRNRPLMADILHAFE  310 (632)
Q Consensus       292 L~~D-------------------------P~~RPs~~ell~~Le  310 (632)
                      ....                         +..|.+.++|++.-+
T Consensus       154 t~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~  197 (229)
T 2yle_A          154 ANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCA  197 (229)
T ss_dssp             TTCCC--------------------CCSCCCCCCSHHHHHHHHH
T ss_pred             HhcccccccccccccccccccccccccccccCcCCHHHHHHHHH
Confidence            8662                         356778888887543

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.93  E-value=0.002  Score=69.36  Aligned_cols=81  Identities=9%  Similarity=0.079  Sum_probs=47.4

Q ss_pred             HhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccC--CCccCCccccCCCCCCCCCcccccchhHH
Q 006772          166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG--TPNYMAPEQWEPEVRGPISFETDTWGFGC  243 (632)
Q Consensus       166 Hs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~G--T~~YmAPE~~~~~~~g~~t~ksDvwSlGv  243 (632)
                      +...++|+|++|.|||++.++ +.|+||+.+......    .+......  ...|++|+.........-....++.++..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~----~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG----FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIE  304 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH----HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHH
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH----HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHH
Confidence            356799999999999999877 999999987653210    01111111  13456666543110101122344556777


Q ss_pred             HHHHHHhC
Q 006772          244 SIMEMLTG  251 (632)
Q Consensus       244 vL~EmltG  251 (632)
                      .+|+.+++
T Consensus       305 ~~~~~y~~  312 (420)
T 2pyw_A          305 QTWNLFNK  312 (420)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77777654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.72  E-value=0.015  Score=60.37  Aligned_cols=75  Identities=16%  Similarity=0.249  Sum_probs=49.3

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccC--CCceeEeeEEEEECCEE
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE--SQSVCWLHGISVINGKI  123 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~--h~~I~~l~~~~~~~~~l  123 (632)
                      .-.+.|+.|.+..+|+....        ...+++|+.....    ......+...+..+..  ...++.++..+..++..
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~--------~~~~vlK~~~~~~----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~  106 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDE--------VQTVFVKINERSY----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHS  106 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESS--------SCEEEEEEEEGGG----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEE
T ss_pred             eeeEEeCCccceeeeEEEEC--------CCeEEEEeCCccc----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCce
Confidence            34678999999999998742        1368899875421    2223333344444432  24466677777777899


Q ss_pred             EEEEecCCC
Q 006772          124 CIAMKFYEG  132 (632)
Q Consensus       124 ~LVmEy~~G  132 (632)
                      |+||||++|
T Consensus       107 ~lvme~l~G  115 (312)
T 3jr1_A          107 FLLLEALNK  115 (312)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEEeccC
Confidence            999999987

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.44  E-value=0.0053  Score=62.63  Aligned_cols=29  Identities=10%  Similarity=0.093  Sum_probs=24.7

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .++|+|+.|.||| ..++.+.|+||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            3899999999999 6667889999997654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.39  E-value=0.044  Score=55.90  Aligned_cols=142  Identities=18%  Similarity=0.204  Sum_probs=73.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCC-chhhHHHHHHHHHHHhhhcc----CCCceeEee-E--
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL-KEDCAKVFVNKFEELFPKFR----ESQSVCWLH-G--  115 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~-~~~~~~~~~~~~~~il~~l~----~h~~I~~l~-~--  115 (632)
                      ...-.+.|+.|....+|+.....        ..+++|+..+. .......    +..++..+.    ..|.++... +  
T Consensus        23 ~~~~~~~i~~G~~n~~~~v~~~~--------g~~vlk~~~~~~~~~~l~~----e~~~l~~L~~~g~~vP~~~~~~~g~~   90 (322)
T 2ppq_A           23 SLTSYKGIAEGVENSNFLLHTTK--------DPLILTLYEKRVEKNDLPF----FLGLMQHLAAKGLSCPLPLPRKDGEL   90 (322)
T ss_dssp             CEEEEEEECC---EEEEEEEESS--------CCEEEEEECC---CCHHHH----HHHHHHHHHHTTCCCCCBCCBTTCCS
T ss_pred             cceEeeccCCCcccceEEEEeCC--------ccEEEEEeCCCCCHHHHHH----HHHHHHHHHHCCCCCCcccCCCCCCE
Confidence            44456778889889999987532        15889988652 2122111    112222221    123322110 1  


Q ss_pred             EEEECCEEEEEEecCCCCH------------HHH---HHHhc-C--CC----CC---HHHHHH------------HHHHH
Q 006772          116 ISVINGKICIAMKFYEGSV------------GDR---IAQQR-G--GK----LP---LPDILR------------YGIQL  158 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~GsL------------~d~---l~~~~-~--~~----l~---~~~~~~------------ia~qI  158 (632)
                      +...++..+++|+|++|..            .+.   ++... .  ..    ..   +.....            +...+
T Consensus        91 ~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l  170 (322)
T 2ppq_A           91 LGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEI  170 (322)
T ss_dssp             CEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHH
T ss_pred             EEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence            1234577899999998731            111   11111 0  00    11   111000            01124


Q ss_pred             HHHHHHHHh-------CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          159 AKGISDLHS-------IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       159 a~gL~yLHs-------~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ...+++++.       .+++|+|+.+.|||++.++.+.|+||+.+.
T Consensus       171 ~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          171 RPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            445566653       368999999999999987666899999664

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.38  E-value=0.032  Score=56.33  Aligned_cols=78  Identities=13%  Similarity=-0.019  Sum_probs=44.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCc--eeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS--VCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~--I~~l~~~~~~~  120 (632)
                      ....-.+.+|.|..+.||+.+...       ++.|.+|+-....... ..+++.+...+..+.....  ++.++.  ..+
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~D-------G~~~~vK~~~~~~~~~-~~~~~~Ea~~L~~L~~~~~vpvP~v~~--~~~   84 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELAD-------GTPLFVKALPDDAPAL-DGLFRAEALGLDWLGRSFGSPVPQVAG--WDD   84 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETT-------SCEEEEEECCTTCCCC-TTHHHHHHHHHHHHTCSTTCCSCCEEE--EET
T ss_pred             CCeEEEEecCCCCCeEEEEEEECC-------CCEEEEEEeCCCCcch-hhHHHHHHHHHHHHHhhCCCCcceEEe--ccC
Confidence            456668899999999999997542       3579999865432211 1223333333444432211  223333  233


Q ss_pred             CEEEEEEecCCC
Q 006772          121 GKICIAMKFYEG  132 (632)
Q Consensus       121 ~~l~LVmEy~~G  132 (632)
                        -++||||+++
T Consensus        85 --~~lv~e~l~~   94 (288)
T 3f7w_A           85 --RTLAMEWVDE   94 (288)
T ss_dssp             --TEEEEECCCC
T ss_pred             --ceEEEEeecc
Confidence              3689999974

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.27  E-value=0.071  Score=54.52  Aligned_cols=29  Identities=14%  Similarity=0.022  Sum_probs=24.7

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..++|+|+++.|||++ + .+.|+||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            4589999999999999 4 899999996643

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.20  E-value=0.25  Score=53.85  Aligned_cols=78  Identities=9%  Similarity=0.034  Sum_probs=41.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .+.+. .+.|+.|-...+|+......      .+.+++|+..+.......  ...+..++..+..+...+.+++.+  .+
T Consensus       108 ~~~~~-i~~lsgG~tN~~y~v~~~~~------~~~~vLRi~g~~~~~~id--R~~E~~vl~~L~~~gl~P~ll~~~--~~  176 (458)
T 2qg7_A          108 VDSLE-FQIINGGITNILIKVKDMSK------QAKYLIRLYGPKTDEIIN--REREKKISCILYNKNIAKKIYVFF--TN  176 (458)
T ss_dssp             STTEE-EEEECC--CEEEEEEEETTT------TEEEEEEEECC-CCSCSC--HHHHHHHHHHHTTSSSBCCEEEEE--TT
T ss_pred             ccCeE-EEEcCCCeEeEEEEEEECCC------CceEEEEECCCChhhhcC--HHHHHHHHHHHHhcCCCCCEEEEe--CC
Confidence            34555 45788888999999976431      146889987542211100  012223344444444445566655  33


Q ss_pred             EEEEEEecCCC
Q 006772          122 KICIAMKFYEG  132 (632)
Q Consensus       122 ~l~LVmEy~~G  132 (632)
                        .+||||++|
T Consensus       177 --G~v~e~I~G  185 (458)
T 2qg7_A          177 --GRIEEFMDG  185 (458)
T ss_dssp             --EEEEECCCS
T ss_pred             --eEEEEeeCC
Confidence              259999987

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=94.96  E-value=0.14  Score=55.30  Aligned_cols=82  Identities=16%  Similarity=0.154  Sum_probs=43.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCC-cccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADD-FDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      +.+. .+.|+.|-...||++........ ....+.+++|+......  ...+.. +..++..+..+...+.+++.+  .+
T Consensus        74 ~~~~-v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~-E~~~l~~L~~~g~~P~l~~~~--~~  147 (429)
T 1nw1_A           74 EHLR-ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVA-ESVIFTLLSERHLGPKLYGIF--SG  147 (429)
T ss_dssp             GGEE-EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHH-HHHHHHHHHHTTSSSCEEEEE--TT
T ss_pred             cceE-EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHH-HHHHHHHHHhCCCCCcEEEEe--CC
Confidence            4444 56788888899999976431100 01135799998844211  022222 223333333333334555543  23


Q ss_pred             EEEEEEecCCC
Q 006772          122 KICIAMKFYEG  132 (632)
Q Consensus       122 ~l~LVmEy~~G  132 (632)
                        .+||||++|
T Consensus       148 --g~v~e~l~G  156 (429)
T 1nw1_A          148 --GRLEEYIPS  156 (429)
T ss_dssp             --EEEECCCCE
T ss_pred             --CEEEEEeCC
Confidence              289999986

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.78  E-value=0.095  Score=53.89  Aligned_cols=32  Identities=19%  Similarity=0.155  Sum_probs=27.5

Q ss_pred             CCceeeeeeCCeEEEecC----CcEEEEecCCceec
Q 006772          168 IGLLVLNLKPSNLLLSEH----DQLVLGDFGIPYLL  199 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~----g~vkL~DFGlak~~  199 (632)
                      ..++|+|+.+.|||++.+    +.+.|+||+.+...
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            469999999999999875    68999999987653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=94.71  E-value=0.062  Score=56.28  Aligned_cols=29  Identities=21%  Similarity=0.193  Sum_probs=24.1

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .++|+|+.+.|||++.++ +.|+||..+..
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            589999999999998654 89999997653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.69  E-value=0.078  Score=56.47  Aligned_cols=150  Identities=17%  Similarity=0.197  Sum_probs=76.5

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCC-CcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSAD-DFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~-~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      .+.+++ +.|..|-...+|+........ .....+.+++|+..+... ...... ++..++..+..+...+.+++.+  +
T Consensus        50 ~~~l~v-~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~-~~~~~~-rE~~vl~~L~~~gv~P~ll~~~--~  124 (379)
T 3feg_A           50 PEELRV-YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQ-GVDSLV-LESVMFAILAERSLGPQLYGVF--P  124 (379)
T ss_dssp             GGGCCC-EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---C-CHHHHH-HHHHHHHHHHHTTSSCCEEEEE--T
T ss_pred             cCceEE-EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccc-hHHHHH-HHHHHHHHHHhcCCCCeEEEEc--C
Confidence            455654 467778889999987642100 001235799998643211 122222 2333444443333334555444  3


Q ss_pred             CEEEEEEecCCCCH---------------HHHHHHhcC------CCCC--HHHHHHHHHHHHH-----------------
Q 006772          121 GKICIAMKFYEGSV---------------GDRIAQQRG------GKLP--LPDILRYGIQLAK-----------------  160 (632)
Q Consensus       121 ~~l~LVmEy~~GsL---------------~d~l~~~~~------~~l~--~~~~~~ia~qIa~-----------------  160 (632)
                      +  .+||||++|..               .+.+.+...      +...  +.++.++..++..                 
T Consensus       125 ~--g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  202 (379)
T 3feg_A          125 E--GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL  202 (379)
T ss_dssp             T--EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred             C--ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence            3  28999998711               111221111      1122  3455555544422                 


Q ss_pred             --HHHHHHh--------CCceeeeeeCCeEEEecC----CcEEEEecCCcee
Q 006772          161 --GISDLHS--------IGLLVLNLKPSNLLLSEH----DQLVLGDFGIPYL  198 (632)
Q Consensus       161 --gL~yLHs--------~~IvHRDLKP~NILld~~----g~vkL~DFGlak~  198 (632)
                        .++.|..        ..++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              2333332        248999999999999976    7899999997643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=94.16  E-value=0.27  Score=51.09  Aligned_cols=31  Identities=19%  Similarity=0.365  Sum_probs=27.3

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            3589999999999999888999999987654

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=89.40  E-value=0.55  Score=50.64  Aligned_cols=29  Identities=17%  Similarity=0.289  Sum_probs=25.6

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .++|+|+.+.||| +.++.+.|+||..+..
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            4899999999999 8888999999997653

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=87.88  E-value=1.5  Score=46.41  Aligned_cols=29  Identities=31%  Similarity=0.401  Sum_probs=24.6

Q ss_pred             ceeeeeeCCeEEE------ecCCcEEEEecCCcee
Q 006772          170 LLVLNLKPSNLLL------SEHDQLVLGDFGIPYL  198 (632)
Q Consensus       170 IvHRDLKP~NILl------d~~g~vkL~DFGlak~  198 (632)
                      ++|.|+.+.|||+      ++++.+.++||-.|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6799999999999      4467899999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	632
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-45
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-44
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-44
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-44
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-43
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-40
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-39
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-39
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-39
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-39
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-39
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-39
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-39
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-39
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-38
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-38
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-38
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-38
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-38
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-37
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-37
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-37
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-37
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-37
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-37
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-37
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-36
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-36
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-36
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-36
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-36
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-35
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-35
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-35
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-35
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-35
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-34
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-33
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-33
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-33
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-32
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-32
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-32
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-31
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-31
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-30
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-30
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-30
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-29
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-29
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-28
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-28
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-27
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-27
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-27
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-24
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-24
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-23
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-23
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-21
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-20
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-16
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-08

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 9e-45
 Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 21/273 (7%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL-FPKF 104
           ++   +G+G FG+V+LA   QS          A+K+L   + + A V      E+     
Sbjct: 9   EIGRPLGKGKFGNVYLAREKQSKFIL------ALKVLFKAQLEKAGVEHQLRREVEIQSH 62

Query: 105 RESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
               ++  L+G      ++ + +++   G+V   +  Q+  K        Y  +LA  +S
Sbjct: 63  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 120

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             HS  ++  ++KP NLLL    +L + DFG            S      GT +Y+ PE 
Sbjct: 121 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 175

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
            E         + D W  G    E L G  P+   + +E Y    I + +   P  +   
Sbjct: 176 IE---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 230

Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAFESSQNA 315
             ++I    +++   RP++ ++L H + ++ ++
Sbjct: 231 ARDLISRLLKHNPSQRPMLREVLEHPWITANSS 263

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (401), Expect = 2e-44
 Identities = 58/273 (21%), Positives = 106/273 (38%), Gaps = 19/273 (6%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP  L      IG G FG V+ A   ++++        A+K +    +   + + +  +E
Sbjct: 12  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVV------AIKKMSYSGKQSNEKWQDIIKE 65

Query: 100 --LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
                K R   +     G  +      + M++  GS  D + +     L   +I      
Sbjct: 66  VRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLL-EVHKKPLQEVEIAAVTHG 123

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
             +G++ LHS  ++  ++K  N+LLSE   + LGDFG         ++ ++    +GTP 
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-----SASIMAPANS--FVGTPY 176

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           +MAPE       G    + D W  G + +E+     P F  +     + +   +      
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS 236

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                   N +  C +   ++RP    +L H F
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 3e-44
 Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 13/278 (4%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---LKEDCAKVFVNK 96
           I    L+L  ++G G FG V        +         AVK L P    + +    F+ +
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---AVKCLKPDVLSQPEAMDDFIRE 61

Query: 97  FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
              +     + +++  L+G+ V+   + +  +           ++  G   L  + RY +
Sbjct: 62  VNAM--HSLDHRNLIRLYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 118

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           Q+A+G+  L S   +  +L   NLLL+  D + +GDFG+   L            R    
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
            + APE  +       S  +DTW FG ++ EM T G +PW G +  +I H +  + E+  
Sbjct: 179 AWCAPESLK---TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ 313
            P   P  + NV++ C+ +   +RP    +      +Q
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 4e-44
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W I    + +  RIG G FG V+    H          ++AVKML           +  F
Sbjct: 3   WEIPDGQITVGQRIGSGSFGTVYKGKWHG---------DVAVKMLN--VTAPTPQQLQAF 51

Query: 98  EELFPKFRESQSVCWLHGISVI-------NGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           +       E   +     ++++         ++ I  ++ E  S+   +      K  + 
Sbjct: 52  K------NEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHL-HIIETKFEMI 104

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
            ++    Q A+G+  LH+  ++  +LK +N+ L E   + +GDFG+  +   R       
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK-SRWSGSHQF 163

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
               G+  +MAPE    + + P SF++D + FG  + E++TG  P+   +  +    +V 
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223

Query: 270 KK----EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           +     +   + S  P A++ ++  C +     RPL   IL + E 
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (389), Expect = 7e-43
 Identities = 52/275 (18%), Positives = 106/275 (38%), Gaps = 16/275 (5%)

Query: 40  IDPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
           ++P    ++   +G G FG V+ A + +++         A K++    E+  + ++ + +
Sbjct: 8   LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLA------AAKVIDTKSEEELEDYMVEID 61

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
            L     +  ++  L         + I ++F  G   D +  +    L    I     Q 
Sbjct: 62  IL--ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 119

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
              ++ LH   ++  +LK  N+L +    + L DFG+         +       +GTP +
Sbjct: 120 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---TIQRRDSFIGTPYW 176

Query: 219 MAPEQWEPEV--RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV-IKKEKPC 275
           MAPE    E     P  ++ D W  G +++EM     P    +   +   +   +     
Sbjct: 177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 236

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            PS      ++ +  C E ++  R   + +L H F
Sbjct: 237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 271

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 4e-40
 Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 24/279 (8%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W ++   LKL   IG+G FGDV L  +  +        ++AVK +    +  A+ F+ + 
Sbjct: 2   WALNMKELKLLQTIGKGEFGDVMLGDYRGN--------KVAVKCIK--NDATAQAFLAEA 51

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
             +  + R S  V  L  I    G + I  ++   GS+ D +  +    L    +L++ +
Sbjct: 52  S-VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 110

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
            + + +  L     +  +L   N+L+SE +   + DFG+           S         
Sbjct: 111 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPV 164

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
            + APE          S ++D W FG  + E+ + G  P+    ++++   V  K  K  
Sbjct: 165 KWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMD 220

Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
            P G PPAV  V+  C+  D   RP    +    E  + 
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (365), Expect = 1e-39
 Identities = 59/293 (20%), Positives = 110/293 (37%), Gaps = 28/293 (9%)

Query: 39  WIDPTSLKLKHR-IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           ++D   L L+ + +G G FG V    +            +AVK+L     D         
Sbjct: 2   YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVV----KTVAVKILKNEAND------PAL 51

Query: 98  EELFPKFRESQSVCWLHGISVIN-------GKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
           ++      E+  +  L    ++            + M+  E G +   +  Q+   +   
Sbjct: 52  KDEL--LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDK 107

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
           +I+    Q++ G+  L     +  +L   N+LL       + DFG+   L          
Sbjct: 108 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVV 268
                   + APE          S ++D W FG  + E  + G +P+ G    E+   ++
Sbjct: 168 THGKWPVKWYAPECIN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-ML 223

Query: 269 IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE 321
            K E+   P+G P  + +++  C+ YD+ NRP  A +     +    V N+G 
Sbjct: 224 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGH 276

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (364), Expect = 1e-39
 Identities = 47/272 (17%), Positives = 107/272 (39%), Gaps = 6/272 (2%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I P+ +  +  IG G FG+V+      S     +   +A+K L     +  +V       
Sbjct: 4   IHPSCVTRQKVIGAGEFGEVYKGMLKTS--SGKKEVPVAIKTLKAGYTEKQRVDFLGEAG 61

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           +  +F     +    G+      + I  ++ E    D+  +++ G+  +  ++     +A
Sbjct: 62  IMGQFSHHNIIRL-EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIA 120

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
            G+  L ++  +  +L   N+L++ +    + DFG+  +L     +    +       + 
Sbjct: 121 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
           APE          +  +D W FG  + E++T  +  + +         +    +   P  
Sbjct: 181 APEAIS---YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD 237

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
            P A+  +++ C++ +   RP  ADI+   + 
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDK 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 2e-39
 Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 23/281 (8%)

Query: 37  RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
           +PW      +   +LKL  R+G G FG+VW+  ++          ++AVK L        
Sbjct: 1   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGH-------TKVAVKSL-KQGSMSP 52

Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
             F+ +   +  K  + Q +  L+ + V    I I  ++ E GS+ D +    G KL + 
Sbjct: 53  DAFLAEANLM--KQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
            +L    Q+A+G++ +     +  +L+ +N+L+S+     + DFG+  L+     +  + 
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
           A       + APE       G  + ++D W FG  + E++T  +  +           + 
Sbjct: 170 AK--FPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           +  +   P   P  +  ++  C++    +RP    +    E
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 2e-39
 Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 17/269 (6%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           IDP  L     +G G FG V               +++A+KM+          F+ + + 
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMS-EDEFIEEAKV 52

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           +       + +  L+G+      I I  ++          ++   +     +L     + 
Sbjct: 53  M--MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 110

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           + +  L S   L  +L   N L+++   + + DFG+   +L    + S          + 
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG--SKFPVRWS 168

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
            PE          S ++D W FG  + E+ + G  P+   +  E    +  +  +   P 
Sbjct: 169 PPEVLM---YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPH 224

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILH 307
                V  ++  C+      RP    +L 
Sbjct: 225 LASEKVYTIMYSCWHEKADERPTFKILLS 253

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 2e-39
 Identities = 55/290 (18%), Positives = 116/290 (40%), Gaps = 28/290 (9%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
               +L+    +G G FG V  AT +  +       ++AVKML    +   +  +    +
Sbjct: 34  FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSI-QVAVKMLKEKADSSEREALMSELK 92

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG--------------- 143
           +  +    +++  L G   ++G I +  ++   G + + +  +R                
Sbjct: 93  MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152

Query: 144 ------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY 197
                   L   D+L +  Q+AKG+  L     +  +L   N+L++    + + DFG+  
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 212

Query: 198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWF 256
            ++  S        R     +MAPE       G  + ++D W +G  + E+ + G+ P+ 
Sbjct: 213 DIMSDSNYVVRGNAR-LPVKWMAPESLF---EGIYTIKSDVWSYGILLWEIFSLGVNPYP 268

Query: 257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
           G  V+  ++ ++    K   P      +  ++  C+ +D R RP   ++ 
Sbjct: 269 GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT 318

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (364), Expect = 2e-39
 Identities = 49/272 (18%), Positives = 106/272 (38%), Gaps = 19/272 (6%)

Query: 41  DPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           DP        +IG+G  G V+ A    +  +       A++ +   ++   ++ +N+   
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEV------AIRQMNLQQQPKKELIINEILV 70

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           +  +  ++ ++       ++  ++ + M++  G  G          +    I     +  
Sbjct: 71  M--RENKNPNIVNYLDSYLVGDELWVVMEYLAG--GSLTDVVTETCMDEGQIAAVCRECL 126

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           + +  LHS  ++  ++K  N+LL     + L DFG    +   +   S  +  +GTP +M
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWM 183

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-KPCIPS 278
           APE      R     + D W  G   +EM+ G  P+  ++     + +      +   P 
Sbjct: 184 APEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE 240

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            L     + +  C + D+  R    ++L H F
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (363), Expect = 3e-39
 Identities = 55/273 (20%), Positives = 116/273 (42%), Gaps = 15/273 (5%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ++ T + +KH++G G +G+V+     + +        +AVK L     +  + F+ +   
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTME-VEEFLKEAAV 66

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
           +  K  +  ++  L G+        I  +F   G++ D + +    ++    +L    Q+
Sbjct: 67  M--KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 124

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           +  +  L     +  +L   N L+ E+  + + DFG+  L+ G + +    A       +
Sbjct: 125 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK--FPIKW 182

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
            APE          S ++D W FG  + E+ T     +        + ++ K  +   P 
Sbjct: 183 TAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 239

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           G P  V  ++  C++++  +RP  A+I  AFE+
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  145 bits (366), Expect = 4e-39
 Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 20/275 (7%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G FG V   T   + ++F      A K ++   E   +    + + +     
Sbjct: 29  DIHEELGTGAFGVVHRVTERATGNNF------AAKFVMTPHESDKETVRKEIQTM--SVL 80

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
              ++  LH     + ++ +  +F  G            K+   + + Y  Q+ KG+  +
Sbjct: 81  RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 140

Query: 166 HSIGLLVLNLKPSNLLLSEHD--QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
           H    + L+LKP N++ +     +L L DFG+   L  +           GT  + APE 
Sbjct: 141 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEV 196

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--CIPSGLP 281
            E     P+ + TD W  G     +L+G+ P+ G++ +E   +V            SG+ 
Sbjct: 197 AE---GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS 253

Query: 282 PAVENVIIGCFEYDLRNRPLMADIL-HAFESSQNA 315
              ++ I      D   R  +   L H + +  NA
Sbjct: 254 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  141 bits (357), Expect = 1e-38
 Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 27/279 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFP-- 102
           + K  +GRG    V    H  +  ++      AVK++ +      +   V +  E     
Sbjct: 6   EPKEILGRGVSSVVRRCIHKPTCKEY------AVKIIDVTGGGSFSAEEVQELREATLKE 59

Query: 103 -----KFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
                K     ++  L      N    +     + G + D +       L   +  +   
Sbjct: 60  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMR 117

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
            L + I  LH + ++  +LKP N+LL +   + L DFG    L         +    GTP
Sbjct: 118 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGEKLREVCGTP 173

Query: 217 NYMAPEQWEPEV---RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
           +Y+APE  E  +         E D W  G  +  +L G  P++ +    +   ++    +
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 233

Query: 274 PCIP--SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
              P        V++++        + R    + L H F
Sbjct: 234 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 272

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 2e-38
 Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 17/268 (6%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKF 104
            L   +G G +G+V LA +  + +        AVK++ +    DC +    +      K 
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEEAV------AVKIVDMKRAVDCPENIKKEICIN--KM 59

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
              ++V   +G         + +++  G  + DRI  +    +P PD  R+  QL  G+ 
Sbjct: 60  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 117

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LH IG+   ++KP NLLL E D L + DFG+   +   +  +  +    GT  Y+APE 
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPEL 176

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPP 282
            +   R   +   D W  G  +  ML G  PW   S   + Y     KK        +  
Sbjct: 177 LKR--REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234

Query: 283 AVENVIIGCFEYDLRNRPLMADIL-HAF 309
           A   ++      +   R  + DI    +
Sbjct: 235 APLALLHKILVENPSARITIPDIKKDRW 262

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 2e-38
 Identities = 51/289 (17%), Positives = 100/289 (34%), Gaps = 28/289 (9%)

Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           P +D   +K +  IG G FG V  A   +         + A+K +               
Sbjct: 5   PVLDWNDIKFQDVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEYASKDDHRDFAGE 60

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRI--------------AQQR 142
            E+  K     ++  L G     G + +A+++   G++ D +              A   
Sbjct: 61  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 120

Query: 143 GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR 202
              L    +L +   +A+G+  L     +  +L   N+L+ E+    + DFG+       
Sbjct: 121 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY 180

Query: 203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVE 261
                          +MA E          +  +D W +G  + E+++     + G +  
Sbjct: 181 VKKTMGR----LPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 233

Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           E+Y  +  +  +   P      V +++  C+      RP  A IL +  
Sbjct: 234 ELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (355), Expect = 2e-38
 Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 29/276 (10%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELF 101
           LK    IGRG F  V+     ++        E+A   L        K    +F+   E+ 
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQ--DRKLTKSERQRFKEEAEML 62

Query: 102 PKFRESQSV---CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
              +    V               I +  +            +R   + +  +  +  Q+
Sbjct: 63  KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTY-LKRFKVMKIKVLRSWCRQI 121

Query: 159 AKGISDLHSIGLLVL--NLKPSNLLLSEHD-QLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
            KG+  LH+    ++  +LK  N+ ++     + +GD G     L      S     +GT
Sbjct: 122 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG-----LATLKRASFAKAVIGT 176

Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVVIKKEKP 274
           P +MAPE +            D + FG  ++EM T   P+    +  +IY  V    +  
Sbjct: 177 PEFMAPEMY----EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA 232

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                  P V+ +I GC   +   R  + D+L HAF
Sbjct: 233 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 268

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  141 bits (355), Expect = 4e-38
 Identities = 49/274 (17%), Positives = 114/274 (41%), Gaps = 11/274 (4%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           ID + +K++  IG G FG+V                 +A+K L     +  +        
Sbjct: 23  IDISCVKIEQVIGAGEFGEVCSGHLK---LPGKREIFVAIKTLKSGYTEKQRRDFLSEAS 79

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           +  +F    +V  L G+   +  + I  +F E    D   +Q  G+  +  ++     +A
Sbjct: 80  IMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIA 138

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSD--SDMALRLGTPN 217
            G+  L  +  +  +L   N+L++ +    + DFG+   L   +     +          
Sbjct: 139 AGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 198

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
           + APE  +       +  +D W +G  + E+++ G +P++  + +++ +++  +  +   
Sbjct: 199 WTAPEAIQ---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPP 254

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           P   P A+  +++ C++ D  +RP    I++  +
Sbjct: 255 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 1e-37
 Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 16/274 (5%)

Query: 39  W-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           W I   SL+L+ ++G+G FG+VW+ T + +         +A+K L P      + F+ + 
Sbjct: 12  WEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKTLKPGTMS-PEAFLQEA 63

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
           + +  K    + +  L+ +        +     +GS+ D +  + G  L LP ++    Q
Sbjct: 64  QVM--KKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 121

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
           +A G++ +  +  +  +L+ +N+L+ E+    + DFG+  L+     +            
Sbjct: 122 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG--AKFPIK 179

Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
           + APE       G  + ++D W FG  + E+ T  +  +   V       V +  +   P
Sbjct: 180 WTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 236

Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
              P ++ +++  C+  +   RP    +    E 
Sbjct: 237 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (352), Expect = 1e-37
 Identities = 63/308 (20%), Positives = 116/308 (37%), Gaps = 29/308 (9%)

Query: 22  DPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKM 81
           DP  L      P   +       L     +G G FG V  AT +      D    +AVKM
Sbjct: 8   DPTQL------PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKM 60

Query: 82  LLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQ 140
           L P      +  +    ++        ++  L G   I G   +  ++   G + + + +
Sbjct: 61  LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120

Query: 141 QRG----------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE 184
           +R                   L L D+L +  Q+AKG++ L S   +  +L   N+LL+ 
Sbjct: 121 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180

Query: 185 HDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS 244
                + DFG+   +   S +            +MAPE          +FE+D W +G  
Sbjct: 181 GRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGIF 236

Query: 245 IMEMLTGIQPWF-GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA 303
           + E+ +     + G  V+  ++ ++ +  +   P   P  + +++  C++ D   RP   
Sbjct: 237 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296

Query: 304 DILHAFES 311
            I+   E 
Sbjct: 297 QIVQLIEK 304

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 3e-37
 Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 23/270 (8%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---LKEDCAKVFVNKFEELFP 102
            L   +G+G FG V+LA   ++   F      A+K L     L +D  +  + + + +  
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKKTNQFF------AIKALKKDVVLMDDDVECTMVE-KRVLS 57

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
              E   +  +         +   M++   G +   I  Q   K  L     Y  ++  G
Sbjct: 58  LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILG 115

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           +  LHS G++  +LK  N+LL +   + + DFG+        L D+      GTP+Y+AP
Sbjct: 116 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN---MLGDAKTNTFCGTPDYIAP 172

Query: 222 EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP 281
           E          +   D W FG  + EML G  P+ G+  EE++H   I+ + P  P  L 
Sbjct: 173 EILL---GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH--SIRMDNPFYPRWLE 227

Query: 282 PAVENVIIGCFEYDLRNRPLMADIL--HAF 309
              +++++  F  +   R  +   +  H  
Sbjct: 228 KEAKDLLVKLFVREPEKRLGVRGDIRQHPL 257

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  139 bits (352), Expect = 3e-37
 Identities = 54/270 (20%), Positives = 102/270 (37%), Gaps = 22/270 (8%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +G G FG V       +   F        K +            N+   +     
Sbjct: 32  DILEELGSGAFGVVHRCVEKATGRVF------VAKFINTPYPLDKYTVKNEISIM--NQL 83

Query: 106 ESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
               +  LH       ++ + ++F   G + DRI      K+   +++ Y  Q  +G+  
Sbjct: 84  HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKH 142

Query: 165 LHSIGLLVLNLKPSNLLLSEHD--QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           +H   ++ L++KP N++        + + DFG+   L      D  + +   T  + APE
Sbjct: 143 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL----NPDEIVKVTTATAEFAAPE 198

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--CIPSGL 280
             +   R P+ F TD W  G     +L+G+ P+ G+   E   +V     +      S +
Sbjct: 199 IVD---REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 255

Query: 281 PPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            P  ++ I    + + R R  + D L H +
Sbjct: 256 SPEAKDFIKNLLQKEPRKRLTVHDALEHPW 285

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 4e-37
 Identities = 45/265 (16%), Positives = 100/265 (37%), Gaps = 17/265 (6%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFPKFRES 107
           +G G FG V    +        +  ++A+K+L   K+   K    +     ++  +   +
Sbjct: 17  LGCGNFGSVRQGVYRMR----KKQIDVAIKVL---KQGTEKADTEEMMREAQIMHQLD-N 68

Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
             +  L G+      + + M+   G    +    +  ++P+ ++     Q++ G+  L  
Sbjct: 69  PYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE 127

Query: 168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
              +  +L   N+LL       + DFG+   L       +  +       + APE     
Sbjct: 128 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN-- 185

Query: 228 VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
                S  +D W +G ++ E L+ G +P+      E+   +  + ++   P   PP +  
Sbjct: 186 -FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECPPELYA 243

Query: 287 VIIGCFEYDLRNRPLMADILHAFES 311
           ++  C+ Y   +RP    +     +
Sbjct: 244 LMSDCWIYKWEDRPDFLTVEQRMRA 268

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 8e-37
 Identities = 56/297 (18%), Positives = 109/297 (36%), Gaps = 23/297 (7%)

Query: 33  PTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP-LKEDCA 90
           P     W      LKL   +GRG FG V  A              +AVKML         
Sbjct: 2   PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEH 60

Query: 91  KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGK----- 145
           +  +++ + L         V  L   +   G + + ++F +        + +  +     
Sbjct: 61  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 120

Query: 146 ----------LPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI 195
                     L L  ++ Y  Q+AKG+  L S   +  +L   N+LLSE + + + DFG+
Sbjct: 121 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 180

Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
               + +               +MAPE          + ++D W FG  + E+ +     
Sbjct: 181 A-RDIYKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGASP 236

Query: 256 F-GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           + G  ++E +   + +  +   P    P +   ++ C+  +   RP  ++++    +
Sbjct: 237 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (344), Expect = 9e-37
 Identities = 54/289 (18%), Positives = 109/289 (37%), Gaps = 18/289 (6%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKF 97
             P   K    +G G F  V LA    ++ ++      A+K+L    + ++    +V + 
Sbjct: 5   KRPEDFKFGKILGEGSFSTVVLARELATSREY------AIKILEKRHIIKENKVPYVTRE 58

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGI 156
            ++  +         L+     + K+   + + + G +   I  ++ G         Y  
Sbjct: 59  RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA 115

Query: 157 QLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           ++   +  LH  G++  +LKP N+LL+E   + + DFG   +L   S   +     +GT 
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANSFVGTA 174

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
            Y++PE             +D W  GC I +++ G+ P+   +   I+    I K +   
Sbjct: 175 QYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK--IIKLEYDF 229

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGL 325
           P    P   +++      D   R    ++        +  +    W  L
Sbjct: 230 PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (342), Expect = 1e-36
 Identities = 52/272 (19%), Positives = 105/272 (38%), Gaps = 17/272 (6%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           IDP+ L     IG G FG V L              ++A+K +        + F+ + E 
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWLNK-------DKVAIKTIREGAMS-EEDFIEEAEV 53

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           +         +  L+G+ +    IC+  +F E        + + G      +L   + + 
Sbjct: 54  M--MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 111

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           +G++ L    ++  +L   N L+ E+  + + DFG+   +L    + S          + 
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG--TKFPVKWA 169

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           +PE +        S ++D W FG  + E+ + G  P+  +S  E+   +     +   P 
Sbjct: 170 SPEVFS---FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPR 225

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
                V  ++  C++    +RP  + +L    
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 257

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 1e-36
 Identities = 57/273 (20%), Positives = 108/273 (39%), Gaps = 12/273 (4%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           I    ++L   IG G FGDV    +       +    +A+K       D  +    +   
Sbjct: 4   IQRERIELGRCIGEGQFGDVHQGIYM---SPENPALAVAIKTCKNCTSDSVREKFLQEAL 60

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
              +F     +  L G+ +    + I M+           Q R   L L  ++ Y  QL+
Sbjct: 61  TMRQFD-HPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
             ++ L S   +  ++   N+L+S +D + LGDFG+   +   +   +          +M
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK--LPIKWM 176

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           APE          +  +D W FG  + E+L  G++P+ G    ++   +    E+  +P 
Sbjct: 177 APESIN---FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPP 232

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
             PP + +++  C+ YD   RP   ++     +
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 265

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 2e-36
 Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 26/276 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKFEELFPK 103
           ++ + IG G +G                   L  K L    + E   ++ V++   L  +
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDG------KILVWKELDYGSMTEAEKQMLVSEVNLLR-E 59

Query: 104 FRESQSVCWLH-GISVINGKICIAMKFYE-GSVGDRIAQQR--GGKLPLPDILRYGIQLA 159
            +    V +    I   N  + I M++ E G +   I +       L    +LR   QL 
Sbjct: 60  LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 119

Query: 160 KGISDLHSIGLLVLN-----LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
             + + H             LKP+N+ L     + LGDFG+  +L   +   S     +G
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKAFVG 176

Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
           TP YM+PEQ     R   + ++D W  GC + E+   + P+   S +E+   +  + +  
Sbjct: 177 TPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR-EGKFR 232

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            IP      +  +I         +RP + +IL +  
Sbjct: 233 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 7e-36
 Identities = 53/273 (19%), Positives = 105/273 (38%), Gaps = 10/273 (3%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           +  T  K    +G G FG V+        +       +A+K L       A   +     
Sbjct: 6   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI--PVAIKELREATSPKANKEILDEAY 63

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
           +      +  VC L GI  +   + +  +           ++    +    +L + +Q+A
Sbjct: 64  VMASVD-NPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           KG++ L    L+  +L   N+L+     + + DFG+  LL            +     +M
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK-VPIKWM 180

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
           A E          + ++D W +G ++ E++T G +P+ G    EI   ++ K E+   P 
Sbjct: 181 ALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQPP 236

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
                V  +++ C+  D  +RP   +++  F  
Sbjct: 237 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 269

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  134 bits (338), Expect = 8e-36
 Identities = 55/290 (18%), Positives = 105/290 (36%), Gaps = 31/290 (10%)

Query: 45  LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
           ++    IG G FG V+ A        ++ +  +AVKML        +    +   L  +F
Sbjct: 15  IEYVRDIGEGAFGRVFQARAP-GLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEG-----------------------SVGDRIAQQ 141
                V    G+  +   +C+  ++                          S   R++  
Sbjct: 74  DNPNIVKL-LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG 201
               L   + L    Q+A G++ L     +  +L   N L+ E+  + + DFG+   +  
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 192

Query: 202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
                +D         +M PE          + E+D W +G  + E+ + G+QP++G + 
Sbjct: 193 ADYYKADGN-DAIPIRWMPPESIF---YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248

Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           EE+ + V         P   P  + N++  C+     +RP    I    +
Sbjct: 249 EEVIYYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 2e-35
 Identities = 52/275 (18%), Positives = 104/275 (37%), Gaps = 9/275 (3%)

Query: 40  IDPTSLKL--KHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
           I P+SL +     IGRG FG V+  T     D+  +    AVK L  + +          
Sbjct: 22  IGPSSLIVHFNEVIGRGHFGCVYHGTLL---DNDGKKIHCAVKSLNRITDIGEVSQFLTE 78

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
             +   F     +  L       G   + + + +        +       + D++ +G+Q
Sbjct: 79  GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 138

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSL-SDSDMALRLGTP 216
           +AKG+  L S   +  +L   N +L E   + + DFG+   +  +   S  +        
Sbjct: 139 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 198

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
            +MA E  +       + ++D W FG  + E++T   P +           +++  +   
Sbjct: 199 KWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 255

Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           P   P  +  V++ C+      RP  ++++    +
Sbjct: 256 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 2e-35
 Identities = 48/282 (17%), Positives = 108/282 (38%), Gaps = 17/282 (6%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
           +    + +   +G+G FG V+         D  E   +A+K +        ++       
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEAS 75

Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG--------GKLPLPD 150
           +  +F     V    G+        + M+    G +   +   R             L  
Sbjct: 76  VMKEFNCHHVVRL-LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 134

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
           +++   ++A G++ L++   +  +L   N +++E   + +GDFG+   +           
Sbjct: 135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 194

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVI 269
             L    +M+PE  +    G  +  +D W FG  + E+ T  +  + G S E++   V+ 
Sbjct: 195 -GLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM- 249

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
           +      P   P  +  ++  C++Y+ + RP   +I+ + + 
Sbjct: 250 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  132 bits (333), Expect = 3e-35
 Identities = 57/287 (19%), Positives = 110/287 (38%), Gaps = 26/287 (9%)

Query: 42  PTSL----KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML---LPLKEDCAKVFV 94
           P+ L    +L   +G G   +V LA   +   D       AVK+L   L         F 
Sbjct: 2   PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDV------AVKVLRADLARDPSFYLRFR 55

Query: 95  NKFEELFPKFRESQSVCWLHGI----SVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPD 150
            + +          ++  ++      +       I M++ +G     I     G +    
Sbjct: 56  REAQNA--AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI-VHTEGPMTPKR 112

Query: 151 ILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMA 210
            +       + ++  H  G++  ++KP+N+++S  + + + DFGI   +     S +  A
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 172

Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
             +GT  Y++PEQ        +   +D +  GC + E+LTG  P+ G S   + +  V +
Sbjct: 173 AVIGTAQYLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 229

Query: 271 KEKP--CIPSGLPPAVENVIIGCFEYDLRNRPL-MADILHAFESSQN 314
              P      GL   ++ V++     +  NR    A++        N
Sbjct: 230 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 4e-35
 Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 21/260 (8%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKF 104
           +    +G G  G V+  +H  S          A K++ L +K       + + + L    
Sbjct: 9   EKISELGAGNGGVVFKVSHKPSGLVM------ARKLIHLEIKPAIRNQIIRELQVL--HE 60

Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             S  +   +G    +G+I I M+  +G   D++  ++ G++P   + +  I + KG++ 
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVIKGLTY 119

Query: 165 LHSI-GLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
           L     ++  ++KPSN+L++   ++ L DFG     +   L DS     +GT +YM+PE+
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG-----VSGQLIDSMANSFVGTRSYMSPER 174

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
            +       S ++D W  G S++EM  G  P      +E+   ++   +     +  PP 
Sbjct: 175 LQ---GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAAETPPR 229

Query: 284 VENVIIGCFEYDLRNRPLMA 303
                     Y + +RP MA
Sbjct: 230 PRTPGRPLSSYGMDSRPPMA 249

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 8e-35
 Identities = 54/288 (18%), Positives = 110/288 (38%), Gaps = 22/288 (7%)

Query: 40  IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL-AVKMLLPLKEDCAKVFVNKFE 98
           +    L L   +G G FG V LA       D        AVKML     +     +    
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69

Query: 99  ELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRG-------------- 143
           E+     + +++  L G    +G + + +++   G++ + +  +R               
Sbjct: 70  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129

Query: 144 GKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS 203
            +L   D++    Q+A+G+  L S   +  +L   N+L++E + + + DFG+   +    
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHI 188

Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
                         +MAPE          + ++D W FG  + E+ T     + G  VEE
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245

Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
           ++  ++ +  +   PS     +  ++  C+      RP    ++   +
Sbjct: 246 LFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 2e-34
 Identities = 47/272 (17%), Positives = 83/272 (30%), Gaps = 29/272 (10%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE-----EL 100
           ++   +G G FG V+                 A+K +   +        N         L
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPV------AIKHVEKDRISDWGELPNGTRVPMEVVL 60

Query: 101 FPKFRES-QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
             K       V  L           + ++  E            G L       +  Q+ 
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           + +   H+ G+L  ++K  N+L+  +  +L L DFG      G  L D+      GT  Y
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-----SGALLKDTVYTDFDGTRVY 175

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
             PE                W  G  + +M+ G  P+             I + +     
Sbjct: 176 SPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIRGQVFFRQ 225

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
            +    +++I  C      +RP   +I  H +
Sbjct: 226 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 257

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 1e-33
 Identities = 54/278 (19%), Positives = 98/278 (35%), Gaps = 34/278 (12%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
               +G G  G V    + ++ + F      A+KML    +        +  EL  +  +
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKF------ALKMLQDCPK------ARREVELHWRASQ 63

Query: 107 SQSVCWLHGI----SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
              +  +  +          + I M+  + G +  RI  +        +       + + 
Sbjct: 64  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 123

Query: 162 ISDLHSIGLLVLNLKPSNLLLSEHDQ---LVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
           I  LHSI +   ++KP NLL +       L L DFG          S + +     TP Y
Sbjct: 124 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPCYTPYY 179

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--IKKEKPCI 276
           +APE   PE         D W  G  +  +L G  P++      I   +   I+  +   
Sbjct: 180 VAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 236

Query: 277 P----SGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           P    S +   V+ +I    + +   R  + + + H +
Sbjct: 237 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 274

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  128 bits (322), Expect = 1e-33
 Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 23/271 (8%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
             +  +G G F +V LA   ++          A+K +     +  +  +     +  K +
Sbjct: 12  DFRDVLGTGAFSEVILAEDKRTQKLV------AIKCIAKKALEGKEGSMENEIAVLHKIK 65

Query: 106 ESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
              ++  L  I    G + + M+    G + DRI     G     D  R   Q+   +  
Sbjct: 66  -HPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKY 122

Query: 165 LHSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
           LH +G++  +LKP NLL    D   ++++ DFG+  +    S+  +      GTP Y+AP
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST----ACGTPGYVAP 178

Query: 222 EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SG 279
           E      + P S   D W  G     +L G  P++ ++  +++  ++  + +   P    
Sbjct: 179 EVLA---QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 235

Query: 280 LPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
           +  + ++ I    E D   R      L H +
Sbjct: 236 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 266

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 2e-33
 Identities = 53/273 (19%), Positives = 104/273 (38%), Gaps = 29/273 (10%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
            +   +GRG FG V       S   +        K +     D  +V V K   +    R
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTY------MAKFVKVKGTD--QVLVKKEISILNIAR 59

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
             +++  LH       ++ +  +F  G  + +RI      +L   +I+ Y  Q+ + +  
Sbjct: 60  -HRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQF 117

Query: 165 LHSIGLLVLNLKPSNLLLSEHD--QLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAP 221
           LHS  +   +++P N++        + + +FG       R L   D   L    P Y AP
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG-----QARQLKPGDNFRLLFTAPEYYAP 172

Query: 222 EQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--- 278
           E  +      +S  TD W  G  +  +L+GI P+  ++ ++I  +  I   +        
Sbjct: 173 EVHQ---HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN--IMNAEYTFDEEAF 227

Query: 279 -GLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
             +     + +      + ++R   ++ L H +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 1e-32
 Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 26/273 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---LKEDCAKVFVNKFEELFP 102
                +G+G FG V L     +   +      A+K+L     + +D     V +   L  
Sbjct: 8   DYLKLLGKGTFGKVILVREKATGRYY------AMKILRKEVIIAKDEVAHTVTESRVL-- 59

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
           +      +  L      + ++C  M++  G         R           YG ++   +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSAL 118

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
             LHS  ++  ++K  NL+L +   + + DFG+    +      + M    GTP Y+APE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS---DGATMKTFCGTPEYLAPE 175

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
             E           D WG G  + EM+ G  P++ +  E ++    I  E+   P  L P
Sbjct: 176 VLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL--ILMEEIRFPRTLSP 230

Query: 283 AVENVIIGCFEYDLRNRPLMA-----DIL-HAF 309
             ++++ G  + D + R         +++ H F
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  126 bits (318), Expect = 2e-32
 Identities = 51/276 (18%), Positives = 103/276 (37%), Gaps = 27/276 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEEL-F 101
            +   IGRG FG+V+      +   +      A+K L   +   +    + +N+   L  
Sbjct: 7   SVHRIIGRGGFGEVYGCRKADTGKMY------AMKCLDKKRIKMKQGETLALNERIMLSL 60

Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAK 160
               +   +  +        K+   +    G  +   +   + G     D+  Y  ++  
Sbjct: 61  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIIL 118

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
           G+  +H+  ++  +LKP+N+LL EH  + + D G     L    S       +GT  YMA
Sbjct: 119 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG-----LACDFSKKKPHASVGTHGYMA 173

Query: 221 PEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI-KKEKPCIPSG 279
           PE  +  V        D +  GC + ++L G  P+     ++ +    +       +P  
Sbjct: 174 PEVLQKGV--AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 231

Query: 280 LPPAVENVIIGCFEYDLRNRP-----LMADIL-HAF 309
             P + +++ G  + D+  R         ++    F
Sbjct: 232 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 267

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  124 bits (313), Expect = 2e-32
 Identities = 47/299 (15%), Positives = 93/299 (31%), Gaps = 32/299 (10%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           K+  RIG G FG ++  T+  +          A+K     +   A    +++        
Sbjct: 8   KVGRRIGEGSFGVIFEGTNLLNNQQV------AIKFEP--RRSDAPQLRDEYRTYK-LLA 58

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
               +  ++          + +    G   + +    G K  +  +     Q+   +  +
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVI-DLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 117

Query: 166 HSIGLLVLNLKPSNLLLSEHD-----QLVLGDFGIPYLL----LGRSLSDSDMALRLGTP 216
           H   L+  ++KP N L+   +      + + DFG+          + +   +     GT 
Sbjct: 118 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG---KSVEEIYHSVVIKKEK 273
            YM+            S   D    G   M  L G  PW G    + ++ Y  +  KK+ 
Sbjct: 178 RYMSINTHL---GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 234

Query: 274 PCI---PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES---SQNAVYNDG-EWTGL 325
             +    +G P      +           P    +   F       N   ++  +W  L
Sbjct: 235 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 293

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  123 bits (310), Expect = 1e-31
 Identities = 67/308 (21%), Positives = 108/308 (35%), Gaps = 36/308 (11%)

Query: 32  TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
           TP+Q    +D         +G G FG V L  H +S + +      A+K+L   K    K
Sbjct: 32  TPSQNTAQLD--QFDRIKTLGTGSFGRVMLVKHKESGNHY------AMKILDKQKVVKLK 83

Query: 92  VFVNKFEE--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLP 149
              +   E  +         V         +    +      G +   +  +R G+   P
Sbjct: 84  QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEP 141

Query: 150 DILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDM 209
               Y  Q+      LHS+ L+  +LKP NLL+ +   + + DFG               
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF------AKRVKGRT 195

Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
               GTP  +APE          +   D W  G  I EM  G  P+F     +IY    I
Sbjct: 196 WTLCGTPEALAPEIIL---SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KI 250

Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNR-----PLMADIL-HAFESSQNAVYNDGEWT 323
              K   PS     +++++    + DL  R       + DI  H + ++ +       W 
Sbjct: 251 VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD-------WI 303

Query: 324 GLGSRALT 331
            +  R + 
Sbjct: 304 AIYQRKVE 311

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 5e-31
 Identities = 51/276 (18%), Positives = 98/276 (35%), Gaps = 27/276 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKFE---EL 100
                +G G F  V       +   +      A K +     K     V     E    +
Sbjct: 13  DTGEELGSGQFAVVKKCREKSTGLQY------AAKFIKKRRTKSSRRGVSREDIEREVSI 66

Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
             + +   +V  LH +      + + ++   G             L   +   +  Q+  
Sbjct: 67  LKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDF-LAEKESLTEEEATEFLKQILN 124

Query: 161 GISDLHSIGLLVLNLKPSNLLLSEHD----QLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           G+  LHS+ +   +LKP N++L + +    ++ + DFG+ + +       ++     GTP
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTP 180

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--P 274
            ++APE        P+  E D W  G     +L+G  P+ G + +E   +V     +   
Sbjct: 181 EFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237

Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
              S      ++ I      D + R  + D L H +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  119 bits (298), Expect = 3e-30
 Identities = 60/272 (22%), Positives = 102/272 (37%), Gaps = 27/272 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFPK 103
           ++   +G G FG V L     +   +      A+K+L        K  V     E L   
Sbjct: 7   QILRTLGTGSFGRVHLIRSRHNGRYY------AMKVLKKEIVVRLK-QVEHTNDERLMLS 59

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                 +  + G      +I + M + EG     +  ++  + P P    Y  ++   + 
Sbjct: 60  IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL-LRKSQRFPNPVAKFYAAEVCLALE 118

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
            LHS  ++  +LKP N+LL ++  + + DFG    +              GTP+Y+APE 
Sbjct: 119 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV------PDVTYTLCGTPDYIAPEV 172

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
                  P +   D W FG  I EML G  P++  +  + Y    I   +   P      
Sbjct: 173 VS---TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK--ILNAELRFPPFFNED 227

Query: 284 VENVIIGCFEYDLRNR-----PLMADIL-HAF 309
           V++++      DL  R         D+  H +
Sbjct: 228 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 259

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 4e-30
 Identities = 51/305 (16%), Positives = 102/305 (33%), Gaps = 51/305 (16%)

Query: 44  SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
           ++ L+  IG+G FG+VW               E+AVK+         + +  + E     
Sbjct: 4   TIVLQESIGKGRFGEVWRGKWRG--------EEVAVKIF---SSREERSWFREAEIYQTV 52

Query: 104 FRESQSVCWLHGISVING----KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
               +++         +     ++ +   ++E GS+ D +       + +  +++  +  
Sbjct: 53  MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALST 109

Query: 159 AKGISDLHSIGLLVL--------NLKPSNLLLSEHDQLVLGDFGIPYLLL-GRSLSDSDM 209
           A G++ LH   +           +LK  N+L+ ++    + D G+           D   
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169

Query: 210 ALRLGTPNYMAPEQWEPEV---RGPISFETDTWGFGCSIMEMLTGIQPWFGK-------- 258
             R+GT  YMAPE  +  +           D +  G    E+                  
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229

Query: 259 -------SVEEIYHSVVIKKEKPCIPSGL-----PPAVENVIIGCFEYDLRNRPLMADIL 306
                  SVEE+   V  +K +P IP+          +  ++  C+  +   R     I 
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289

Query: 307 HAFES 311
                
Sbjct: 290 KTLSQ 294

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  117 bits (294), Expect = 6e-30
 Identities = 47/279 (16%), Positives = 82/279 (29%), Gaps = 26/279 (9%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +L  +IG G FGD++L T   +        E+A+K+     +        + +    K  
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKH--PQLHIESKIY--KMM 59

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           +              G   + +    G   + +      K  L  +L    Q+   I  +
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119

Query: 166 HSIGLLVLNLKPSNLLLSEHD---QLVLGDFGIPYLLLGRSLSDSDMALRL----GTPNY 218
           HS   +  ++KP N L+        + + DFG+                      GT  Y
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK----- 273
            +            S   D    G  +M    G  PW G              EK     
Sbjct: 180 ASINTHL---GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236

Query: 274 -PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
              +  G P      +  C      ++P  + +   F +
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 275

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 3e-29
 Identities = 58/294 (19%), Positives = 93/294 (31%), Gaps = 52/294 (17%)

Query: 51  IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE---- 106
           +G G F  V+ A    +          A+K +       AK  +N+        RE    
Sbjct: 6   LGEGQFATVYKARDKNTNQIV------AIKKIKLGHRSEAKDGINRTAL-----REIKLL 54

Query: 107 ----SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
                 ++  L         I +   F E  + + I +     L    I  Y +   +G+
Sbjct: 55  QELSHPNIIGLLDAFGHKSNISLVFDFMETDL-EVIIKDNSLVLTPSHIKAYMLMTLQGL 113

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
             LH   +L  +LKP+NLLL E+  L L DFG+          +     ++ T  Y APE
Sbjct: 114 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYTHQVVTRWYRAPE 170

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC------- 275
                         D W  GC + E+L  +    G S  +    +      P        
Sbjct: 171 LLFG--ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 228

Query: 276 -------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                              I S     + ++I G F ++   R      L   +
Sbjct: 229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 8e-29
 Identities = 57/275 (20%), Positives = 101/275 (36%), Gaps = 18/275 (6%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFP 102
           +L   +G G +G V+L       D    Y   A+K+L                   ++  
Sbjct: 27  ELLKVLGTGAYGKVFLVRKISGHDTGKLY---AMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
             R+S  +  LH       K+ + + +  G        QR  +    ++  Y  ++   +
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLAL 142

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
             LH +G++  ++K  N+LL  +  +VL DFG+    +      +      GT  YMAP+
Sbjct: 143 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD--FCGTIEYMAPD 200

Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--IKKEKPCIPSGL 280
                  G      D W  G  + E+LTG  P+     +     +   I K +P  P  +
Sbjct: 201 IVRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 259

Query: 281 PPAVENVIIGCFEYDLRNRPLMA-----DIL-HAF 309
               +++I      D + R         +I  H F
Sbjct: 260 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 294

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 2e-28
 Identities = 54/299 (18%), Positives = 103/299 (34%), Gaps = 48/299 (16%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKFEEL-FP 102
           +    IG G +G V+ A   ++   F     +A+K +     +E      + +   L   
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGGRF-----VALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 103 KFRESQSVCWLHGISVI-----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
           +  E  +V  L  +  +       K+ +  +  +  +   + +     +P   I     Q
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTP 216
           L +G+  LHS  ++  +LKP N+L++   Q+ L DFG     L R  S       +  T 
Sbjct: 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG-----LARIYSFQMALTSVVVTL 179

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC- 275
            Y APE      +   +   D W  GC   EM      + G S  +    ++     P  
Sbjct: 180 WYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236

Query: 276 ------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                                     + +    +++++ C  ++   R      L H +
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 295

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (282), Expect = 4e-28
 Identities = 66/313 (21%), Positives = 108/313 (34%), Gaps = 50/313 (15%)

Query: 38  PWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
           P+ D  S  +   +IG+G FG+V+ A H ++          A+K +L   E         
Sbjct: 4   PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV------ALKKVLMENEKEGFPITAL 57

Query: 97  FEELFPKFRESQSVCWLHGI--------SVINGKICIAMKFYEGSVGDRIAQQRGGKLPL 148
            E    +  + ++V  L  I        +   G I +   F E  +   +      K  L
Sbjct: 58  REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTL 116

Query: 149 PDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP-YLLLGRSLSDS 207
            +I R    L  G+  +H   +L  ++K +N+L++    L L DFG+     L ++   +
Sbjct: 117 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 176

Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
               R+ T  Y  PE    E         D WG GC + EM T      G + +     +
Sbjct: 177 RYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 234

Query: 268 V-------------------------IKKEKPCIPSGLPPAVE-----NVIIGCFEYDLR 297
                                     +K +K  +   L   V      ++I      D  
Sbjct: 235 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 294

Query: 298 NRPLMADIL-HAF 309
            R    D L H F
Sbjct: 295 QRIDSDDALNHDF 307

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 6e-27
 Identities = 58/294 (19%), Positives = 97/294 (32%), Gaps = 43/294 (14%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKFEELFPK 103
           +   +IG G +G V+ A +  + +        A+K +      E      + +   L  K
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGEVV------ALKKIRLDTETEGVPSTAIREISLL--K 56

Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
                ++  L  +     K+ +  +F    +   +       +PLP I  Y  QL +G++
Sbjct: 57  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116

Query: 164 DLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
             HS  +L  +LKP NLL++    + L DFG+        +        + T  Y APE 
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 173

Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-------- 275
                    S   D W  GC   EM+T    + G S  +    +      P         
Sbjct: 174 LLG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231

Query: 276 -------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                              +   L     +++     YD   R      L H F
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  108 bits (270), Expect = 7e-27
 Identities = 55/292 (18%), Positives = 97/292 (33%), Gaps = 41/292 (14%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
               +IG G +G V+ A ++            A+K +   KED         E    K  
Sbjct: 5   HGLEKIGEGTYGVVYKAQNNYG-------ETFALKKIRLEKEDEGIPSTTIREISILKEL 57

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           +  ++  L+ +     ++ +  +  +  +   +    GG L       + +QL  GI+  
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYC 116

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           H   +L  +LKP NLL++   +L + DFG+        +        + T  Y AP+   
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDVLM 173

Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC---------- 275
                  S   D W  GC   EM+ G   + G S  +    +      P           
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231

Query: 276 -----------------IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                               GL  +  +++    + D   R      L HA+
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 9e-27
 Identities = 48/301 (15%), Positives = 95/301 (31%), Gaps = 51/301 (16%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE---ELFP 102
                IG G +G V  A  + +          A+K + P +    + +  +     ++  
Sbjct: 11  TNLSYIGEGAYGMVCSAYDNVNKVRV------AIKKISPFEH---QTYCQRTLREIKILL 61

Query: 103 KFRESQSV----CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
           +FR    +                + +        +   +   +   L    I  +  Q+
Sbjct: 62  RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL---KTQHLSNDHICYFLYQI 118

Query: 159 AKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
            +G+  +HS  +L  +LKPSNLLL+    L + DFG+  +          +   + T  Y
Sbjct: 119 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--- 275
            APE          +   D W  GC + EML+    + GK   +  + ++     P    
Sbjct: 179 RAPEIMLNSK--GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236

Query: 276 --------------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HA 308
                                     +         +++     ++   R  +   L H 
Sbjct: 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296

Query: 309 F 309
           +
Sbjct: 297 Y 297

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  101 bits (253), Expect = 3e-24
 Identities = 55/310 (17%), Positives = 109/310 (35%), Gaps = 56/310 (18%)

Query: 38  PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
            W +    +L  ++GRG + +V+ A +  + +         VK+L P+K+   K  +   
Sbjct: 30  EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKV------VVKILKPVKKKKIKREIKIL 83

Query: 98  EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
           E L    R   ++  L  I         A+ F   +  D   +Q    L   DI  Y  +
Sbjct: 84  ENL----RGGPNIITLADIVKDPVSRTPALVFEHVNNTD--FKQLYQTLTDYDIRFYMYE 137

Query: 158 LAKGISDLHSIGLLVLNLKPSNLLL-SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
           + K +   HS+G++  ++KP N+++  EH +L L D+G+            +  +R+ + 
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY----HPGQEYNVRVASR 193

Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKKEKPC 275
            +  PE           +  D W  GC +  M+   +P+F G    +    +        
Sbjct: 194 YFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 251

Query: 276 I-----------------------------------PSGLPPAVENVIIGCFEYDLRNRP 300
           +                                      + P   + +     YD ++R 
Sbjct: 252 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 311

Query: 301 LMADIL-HAF 309
              + + H +
Sbjct: 312 TAREAMEHPY 321

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 6e-24
 Identities = 60/300 (20%), Positives = 98/300 (32%), Gaps = 53/300 (17%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKFEEL--- 100
           +    +G G +G V  A   ++          A+K L      E  AK    +   L   
Sbjct: 21  RDLQPVGSGAYGAVCSAVDGRTGAKV------AIKKLYRPFQSELFAKRAYRELRLLKHM 74

Query: 101 -FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
                     V              + M F    +G  +   +  KL    I     Q+ 
Sbjct: 75  RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM---KHEKLGEDRIQFLVYQML 131

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
           KG+  +H+ G++  +LKP NL ++E  +L + DFG+          DS+M   + T  Y 
Sbjct: 132 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA------DSEMTGYVVTRWYR 185

Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV----------- 268
           APE          +   D W  GC + EM+TG   + G    +    ++           
Sbjct: 186 APEVILN--WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 243

Query: 269 ------------------IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                              KK+   I +   P   N++      D   R    + L H +
Sbjct: 244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 303

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (245), Expect = 2e-23
 Identities = 52/293 (17%), Positives = 103/293 (35%), Gaps = 41/293 (13%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR 105
           +   +IG G +G V+ A + ++      +  +A+K +    +D         E    K  
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRET------HEIVALKRVRLDDDDEGVPSSALREICLLKEL 58

Query: 106 ESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
           + +++  LH +   + K+ +  +F +  +        G   P   +  +  QL KG+   
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFC 117

Query: 166 HSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
           HS  +L  +LKP NLL++ + +L L +FG+        +     +  + T  Y  P+   
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRPPDVLF 174

Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKKEKPC--------- 275
                  S   D W  GC   E+    +P F G  V++    +      P          
Sbjct: 175 G--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232

Query: 276 ------------------IPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
                             +   L     +++    + +   R    + L H +
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.9 bits (248), Expect = 2e-23
 Identities = 68/323 (21%), Positives = 108/323 (33%), Gaps = 59/323 (18%)

Query: 26  LRTVVATPTQ--TRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML 82
           + TVVATP Q   RP  +  T  K+   IG G FG V+ A    S +        A+K +
Sbjct: 3   VTTVVATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELV------AIKKV 53

Query: 83  LPLKEDCAKVFVNKFEELFPKFR-----ESQSVCWLHGISVINGKICIAMKFYEGSVGDR 137
           L  K      F N+  ++  K         +   +  G       + + + +   +V   
Sbjct: 54  LQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 108

Query: 138 IAQ--QRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFG 194
                +    LP+  +  Y  QL + ++ +HS G+   ++KP NLLL      L L DFG
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

Query: 195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
               L+            + +  Y AP           +   D W  GC + E+L G   
Sbjct: 169 SAKQLV----RGEPNVSYICSRYYRAP--ELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

Query: 255 WFGKSVEEIYHSVVIKKEKPC---------------------------IPSGLPPAVENV 287
           + G S  +    ++     P                                 PP    +
Sbjct: 223 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282

Query: 288 IIGCFEYDLRNRPLMADIL-HAF 309
                EY    R    +   H+F
Sbjct: 283 CSRLLEYTPTARLTPLEACAHSF 305

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.9 bits (227), Expect = 8e-21
 Identities = 57/308 (18%), Positives = 101/308 (32%), Gaps = 55/308 (17%)

Query: 39  WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
           W  P   +    +G G +G V  A   ++          AVK L   +   + +   +  
Sbjct: 14  WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV------AVKKLS--RPFQSIIHAKRTY 65

Query: 99  ---ELFPKFRESQSV----CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDI 151
               L    +    +     +    S+        +    G+  + I   +  KL    +
Sbjct: 66  RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI--VKCQKLTDDHV 123

Query: 152 LRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
                Q+ +G+  +HS  ++  +LKPSNL ++E  +L + DFG+          D +M  
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT------DDEMTG 177

Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV--- 268
            + T  Y APE          +   D W  GC + E+LTG   + G    +    ++   
Sbjct: 178 YVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235

Query: 269 --------------------------IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLM 302
                                      K     +  G  P   +++      D   R   
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295

Query: 303 ADIL-HAF 309
           A  L HA+
Sbjct: 296 AQALAHAY 303

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.8 bits (224), Expect = 2e-20
 Identities = 58/294 (19%), Positives = 97/294 (32%), Gaps = 31/294 (10%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP--LKEDCAKVFVNKFEEL--- 100
           +    IG G  G V  A       +       A+K L      +  AK    +   +   
Sbjct: 20  QNLKPIGSGAQGIVCAAYDAVLDRNV------AIKKLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 101 -FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
                    +V            + + M+  + ++   I  +         +     Q+ 
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL----DHERMSYLLYQML 129

Query: 160 KGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNY 218
            GI  LHS G++  +LKPSN+++     L + DFG     L R+   S  M   + T  Y
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYVVTRYY 184

Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
            APE              D W  GC + EM+     + G+   + ++ V+ +   PC   
Sbjct: 185 RAPEVIL---GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC--- 238

Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALTD 332
              P     +       + NRP  A +        +    D E   L +    D
Sbjct: 239 ---PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.7 bits (195), Expect = 1e-16
 Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 24/301 (7%)

Query: 46  KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELFPK 103
            L  ++G G F  VWLA    +          A+K++    +  + A+  +   + +   
Sbjct: 16  ILVRKLGWGHFSTVWLAKDMVNNTHV------AMKIVRGDKVYTEAAEDEIKLLQRVNDA 69

Query: 104 FRESQSVCWLHGISVI----------NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
               +     + I  +             + +  +    ++   I +     +PL  + +
Sbjct: 70  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 129

Query: 154 YGIQLAKGISDLH-SIGLLVLNLKPSNLLLSEHDQ-LVLGDFGIPYLLLGRSLSDSDMAL 211
              QL  G+  +H   G++  ++KP N+L+   D    L    I  L       +     
Sbjct: 130 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 189

Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
              T  Y +PE        P     D W   C I E++TG   +                
Sbjct: 190 I-QTREYRSPEVLL---GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 245

Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRALT 331
           +   +   LP  +         +      L       F   ++ +    +++   ++ ++
Sbjct: 246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 305

Query: 332 D 332
           D
Sbjct: 306 D 306

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 52.9 bits (126), Expect = 1e-08
 Identities = 28/212 (13%), Positives = 64/212 (30%), Gaps = 35/212 (16%)

Query: 47  LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
           +   +G G    V+     +         E  VK          KV   +          
Sbjct: 4   IGKLMGEGKESAVFNCYSEKF-------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVL 56

Query: 107 SQSVCWLHGISVINGKICIAMKFYE----GSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
           +         ++   +     K Y       + + I  +   ++ + +       + + +
Sbjct: 57  AIRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEV 116

Query: 163 SDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
           +  +  G++  +L   N+L+SE   + + DF                ++ +G       E
Sbjct: 117 AKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFP--------------QSVEVGEEG--WRE 159

Query: 223 QWEPEVRGPISF-------ETDTWGFGCSIME 247
             E +VR  I++       E D       I++
Sbjct: 160 ILERDVRNIITYFSRTYRTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	632
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.84
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.01
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.1
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.96
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.39
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.04
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.29

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-52  Score=442.63  Aligned_cols=274  Identities=20%  Similarity=0.367  Sum_probs=233.1

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      |+.++|++++.||+|+||.||+|+++.++      +.||||++.+..   ......+.+ +..+++.+ +||||+.++++
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~------~~~AiK~i~k~~~~~~~~~~~~~~-E~~il~~l-~hp~Iv~l~~~   73 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATG------RYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNT-RHPFLTALKYA   73 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHH-HHHHHHSC-CCTTBCCEEEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEchhhccCHHHHHHHHH-HHHHHHhC-CCCCEEEEEee
Confidence            67789999999999999999999998766      489999997532   122233333 34455555 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +.+++.+|+||||++ |+|.+++...  +.+++..++.|+.||+.||+|||+++|+||||||+|||++.+|.+||+|||+
T Consensus        74 ~~~~~~~~iv~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~  151 (337)
T d1o6la_          74 FQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             eccccccccceeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccc
Confidence            999999999999999 5777776553  5899999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      |+.....   .......+||+.|||||++.+.   .|+.++|||||||++|||++|+.||.+.+..+++..+.  ...+.
T Consensus       152 a~~~~~~---~~~~~~~~GT~~Y~aPE~~~~~---~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~--~~~~~  223 (337)
T d1o6la_         152 CKEGISD---GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIR  223 (337)
T ss_dssp             CBCSCCT---TCCBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCC
T ss_pred             ccccccC---CcccccceeCHHHhhhhhccCC---CCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHh--cCCCC
Confidence            9865332   2233457899999999999754   68899999999999999999999999999988887766  45577


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      +|..+|+++.+||++||++||.+|++     +.|+++      |++|.+.+|..+..+.+.+|+.|.
T Consensus       224 ~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~------Hp~f~~i~~~~l~~~~~~~p~~P~  284 (337)
T d1o6la_         224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME------HRFFLSINWQDVVQKKLLPPFKPQ  284 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc------CcccccCCHHHHHhCCCCCCCCCC
Confidence            89999999999999999999999995     667665      889999999999988888887654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-53  Score=436.01  Aligned_cols=273  Identities=19%  Similarity=0.342  Sum_probs=226.5

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .+++|++++.||+|+||+||+|.++.++      +.||||++.+...  ......+.++..++.++ +||||+.+++++.
T Consensus         6 ~p~dy~i~~~lG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~   78 (288)
T d1uu3a_           6 RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQ   78 (288)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEE
T ss_pred             CCCCCEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEE
Confidence            4578999999999999999999998766      4899999864321  11122233444555555 7999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      +++.+||||||++| +|.+++...  +.+++..++.++.|++.||+|||+++|+||||||+|||+++++.+||+|||+|+
T Consensus        79 ~~~~~~ivmEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~  156 (288)
T d1uu3a_          79 DDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK  156 (288)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ECCEEEEEEEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccce
Confidence            99999999999984 787777654  589999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      .+.... ........+||+.|||||++.+.   .++.++|||||||+||||++|..||.+.+..+++..+.  ...+.+|
T Consensus       157 ~~~~~~-~~~~~~~~~GT~~Y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~--~~~~~~p  230 (288)
T d1uu3a_         157 VLSPES-KQARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFP  230 (288)
T ss_dssp             ECC-----------CCCCGGGCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--TTCCCCC
T ss_pred             ecccCC-cccccccccCCccccCceeeccC---CCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHH--cCCCCCC
Confidence            764321 11223456899999999999754   68999999999999999999999999999888888776  3456788


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccc
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSR  328 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~  328 (632)
                      ..+++++.+||.+||+.||++|||++|++....-..++||.+.+|+.+..+
T Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~  281 (288)
T d1uu3a_         231 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ  281 (288)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcC
Confidence            999999999999999999999999999876555556889999999988754

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-51  Score=419.70  Aligned_cols=248  Identities=23%  Similarity=0.372  Sum_probs=211.6

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +.++|++.+.||+|+||+||+|+++.++      +.||||++.+...  ........++..++..+ +||||+.+++++.
T Consensus         4 ~l~dy~i~~~iG~G~fg~Vy~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~   76 (263)
T d2j4za1           4 ALEDFEIGRPLGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFH   76 (263)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             chhHeEEEEEEecCCCcEEEEEEECCCC------cEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEE
Confidence            4579999999999999999999998765      4899999865321  11122233334555555 7999999999999


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      +++.+||||||++ |+|.+++...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+
T Consensus        77 ~~~~~~ivmEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~  154 (263)
T d2j4za1          77 DATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV  154 (263)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCS
T ss_pred             ECCEEEEEEeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceee
Confidence            9999999999998 5888887654  479999999999999999999999999999999999999999999999999997


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....     ......+||+.|||||++.+.   +++.++|||||||+||||++|+.||.+.+..+++..+.  ...+.+|
T Consensus       155 ~~~~-----~~~~~~~Gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~--~~~~~~p  224 (263)
T d2j4za1         155 HAPS-----SRRTTLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFP  224 (263)
T ss_dssp             CCCC-----CCCEETTEEGGGCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCC
T ss_pred             ecCC-----CcccccCCCCcccCHHHHcCC---CCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCC
Confidence            6432     223456899999999999854   68899999999999999999999999999888887765  4556788


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+|+++.+||.+||+.||++|||+.|+++
T Consensus       225 ~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         225 DFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            999999999999999999999999999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-51  Score=430.76  Aligned_cols=272  Identities=24%  Similarity=0.408  Sum_probs=227.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++++.||+|+||+||+|.++.++      +.||||++++..   ....+.+..+ ..++....+||||+.+++++.+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~------~~vAvK~i~k~~~~~~~~~~~~~~e-~~~l~~~~~hp~Iv~~~~~~~~   74 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTN------QFFAIKALKKDVVLMDDDVECTMVE-KRVLSLAWEHPFLTHMFCTFQT   74 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEEHHHHHHTTCHHHHHHH-HHHHHHHTTCTTBCCEEEEEEC
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCC------CEEEEEEEchhhccChHHHHHHHHH-HHHHHHhCCCCcEEEEEEEEcc
Confidence            68999999999999999999998766      489999996532   1222333333 3444555689999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+||||||++ |+|.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||+++++++||+|||+++.
T Consensus        75 ~~~~yivmEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~  152 (320)
T d1xjda_          75 KENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE  152 (320)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCceeEEEeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhh
Confidence            999999999998 5888877653  4799999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS  278 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~  278 (632)
                      ....   .......+||+.|||||++.+   ..++.++|||||||++|||++|+.||.+.+..+++..+.  ...+.+|.
T Consensus       153 ~~~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~--~~~~~~p~  224 (320)
T d1xjda_         153 NMLG---DAKTNTFCGTPDYIAPEILLG---QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR--MDNPFYPR  224 (320)
T ss_dssp             CCCT---TCCBCCCCSCGGGCCHHHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCT
T ss_pred             cccc---cccccccCCCCCcCCHHHHcC---CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCc
Confidence            5332   223344689999999999974   468899999999999999999999999999988888776  45677889


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHH-HHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMA-DILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~-ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .+|+++.+||++||++||++||++. ++++      ++++.+.+|+.+..+.+.+|+.|.
T Consensus       225 ~~s~~~~dli~~~L~~dP~~R~s~~~~l~~------hpff~~~~~~~l~~~~~~pp~~p~  278 (320)
T d1xjda_         225 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ------HPLFREINWEELERKEIDPPFRPK  278 (320)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG------SGGGTTCCHHHHHTTCSCC-----
T ss_pred             cCCHHHHHHHHHhcccCCCCCcCHHHHHHh------CchhccCCHHHHHhcCCCCCCCCC
Confidence            9999999999999999999999985 6654      789999999998888887776554

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-51  Score=432.13  Aligned_cols=269  Identities=20%  Similarity=0.326  Sum_probs=220.1

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|++++|++.+.||+|+||+||+|++...++. .....||+|.+...........+.++..++.++.+||||+.+++++
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKT-GVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSS-SCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcc-cceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            347889999999999999999999998765432 2334799999876443333333344456667777899999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeeee
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRG---------------------GKLPLPDILRYGIQLAKGISDLHSIGLLVLNL  175 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~---------------------~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDL  175 (632)
                      .+++.+||||||++ |+|.+++.....                     ..+++..++.|+.||+.||+|||+++||||||
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            99999999999998 688888865421                     35899999999999999999999999999999


Q ss_pred             eCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCC
Q 006772          176 KPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQP  254 (632)
Q Consensus       176 KP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~P  254 (632)
                      ||+|||++.++++||+|||+|+....... ........||+.|||||++.+   +.++.++|||||||+||||+| |..|
T Consensus       191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~---~~~~~~~DiwS~Gvil~emlt~g~~P  266 (325)
T d1rjba_         191 AARNVLVTHGKVVKICDFGLARDIMSDSN-YVVRGNARLPVKWMAPESLFE---GIYTIKSDVWSYGILLWEIFSLGVNP  266 (325)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTT-SEEETTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             chhccccccCCeEEEeeccccccccCCCc-eeeeccccCCCccCChHHHcC---CCCCcceeccchhHHHHHHHhCCCCC
Confidence            99999999999999999999986543221 112234568999999999874   478999999999999999998 8999


Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          255 WFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       255 F~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      |.+.+..+.+..++....++..|..+|+++.+||.+||+.||++|||++||++.|..
T Consensus       267 f~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         267 YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             STTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            998776666666666677788899999999999999999999999999999998853

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.1e-51  Score=426.53  Aligned_cols=271  Identities=22%  Similarity=0.356  Sum_probs=227.7

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +.++|++++.||+|+||+||+|+++.++      +.||||++++...  ....+...++..++..+ +||||+.+++++.
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g------~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~   74 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNG------RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQ   74 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCC------CEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEe
Confidence            4578999999999999999999998766      4899999964321  11122233344555554 7999999999999


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      +++.+|+||||++| ++..++..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.+|.+||+|||+|+
T Consensus        75 ~~~~~~ivmE~~~gg~l~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~  152 (316)
T d1fota_          75 DAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK  152 (316)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred             eCCeeeeEeeecCCccccccccc--cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccce
Confidence            99999999999996 44444433  4578999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ....      .....+||+.|||||++.+.   .|+.++|||||||++|||++|+.||.+.+..+++..+..  ....+|
T Consensus       153 ~~~~------~~~~~~Gt~~Y~APE~l~~~---~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--~~~~~p  221 (316)
T d1fota_         153 YVPD------VTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN--AELRFP  221 (316)
T ss_dssp             ECSS------CBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--CCCCCC
T ss_pred             Eecc------ccccccCcccccCHHHHcCC---CCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHc--CCCCCC
Confidence            7532      23456899999999999754   688999999999999999999999999999888887763  456678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ..+|+++.++|.+||++||.+|+     +++++++      ++++.+.+|+.+..+...+|+.++
T Consensus       222 ~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~------Hp~f~~i~~~~l~~~~~~~p~~p~  280 (316)
T d1fota_         222 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN------HPWFKEVVWEKLLSRNIETPYEPP  280 (316)
T ss_dssp             TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT------SGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc------CcccccCCHHHHHhCCCCcCCCCC
Confidence            89999999999999999999996     7888776      889999999999888887776553

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-51  Score=425.41  Aligned_cols=267  Identities=18%  Similarity=0.327  Sum_probs=208.7

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.+.||+|+||+||+|+++.+++   ....||||.+.........+.+.++..++.++ +||||+.+++++
T Consensus        21 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~   96 (299)
T d1jpaa_          21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK---REIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGVV   96 (299)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC------CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             hhhChhhcEEeeEEeeCCCeEEEEEEEeCCCC---EEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCCccEEEEE
Confidence            35778899999999999999999999876542   23469999987654433333233444556666 799999999999


Q ss_pred             EECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      ..++.+||||||++| +|.+++. ...+.+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+|
T Consensus        97 ~~~~~~~iv~Ey~~~g~L~~~~~-~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla  175 (299)
T d1jpaa_          97 TKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS  175 (299)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHH-TTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             eeCCEEEEEEEecCCCcceeeec-cccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccc
Confidence            999999999999995 5655554 34567999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCC--ccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccC
Q 006772          197 YLLLGRSLSDS--DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       197 k~~~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      +..........  ......||+.|||||++..   +.++.++|||||||+||||+| |+.||.+.+..++...+.. ..+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~-~~~  251 (299)
T d1jpaa_         176 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYR  251 (299)
T ss_dssp             --------------------CGGGSCHHHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCC
T ss_pred             eEccCCCCcceeeecccccCCccccCHHHHhc---CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCC
Confidence            87643221111  1122457999999999874   478999999999999999998 8999999998888777653 455


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ++.|..+|+++.+||.+||+.||++||++.+|++.|+.+.
T Consensus       252 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         252 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            6678899999999999999999999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.8e-51  Score=422.84  Aligned_cols=266  Identities=21%  Similarity=0.383  Sum_probs=220.4

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeE
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~  112 (632)
                      |.-....|+.++|++.++||+|+||+||+|.++.++      +.||||+++..... .+.+.++ ..++.++ +||||+.
T Consensus         7 p~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~-~~~~~~E-~~il~~l-~HpnIv~   77 (287)
T d1opja_           7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTME-VEEFLKE-AAVMKEI-KHPNLVQ   77 (287)
T ss_dssp             TTCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGT------EEEEEEECCTTCSC-HHHHHHH-HHHHHHC-CCTTBCC
T ss_pred             CCCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCC------eEEEEEEECCccch-HHHHHHH-HHHHHhC-CCCCEec
Confidence            333345588999999999999999999999998655      48999999764432 3444444 4556665 7999999


Q ss_pred             eeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          113 LHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +++++.+++.+||||||++ |++.+++.......+++..++.++.||+.||+|||+++|+||||||+||||++++.+||+
T Consensus        78 ~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~  157 (287)
T d1opja_          78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA  157 (287)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             CCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEc
Confidence            9999999999999999998 688888877666789999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCC-CCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP-WFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~P-F~~~~~~ei~~~i~~~  270 (632)
                      |||+|+.......  .......||+.|||||++.+   +.|+.++|||||||++|||++|..| |.+.+..+++..+ ..
T Consensus       158 DFG~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~---~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i-~~  231 (287)
T d1opja_         158 DFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EK  231 (287)
T ss_dssp             CCCCTTTCCSSSS--EEETTEEECGGGCCHHHHHH---CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HT
T ss_pred             cccceeecCCCCc--eeeccccccccccChHHHcC---CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH-hc
Confidence            9999986543211  12233458999999999874   4789999999999999999996555 5555666665544 45


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..++.+|..+|+++.+||.+||+.||++|||+.+|++.|+.+.
T Consensus       232 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            5677788999999999999999999999999999999887653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-50  Score=415.73  Aligned_cols=269  Identities=19%  Similarity=0.317  Sum_probs=209.2

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|+++.|++.+.||+|+||+||+|.++.++.  .....||||++...........+.++..++.++ +||||+.+++++.
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~   79 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG--KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVIS   79 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCC--EEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEe
Confidence            5778999999999999999999999876543  233579999997654433333233444566665 6999999999999


Q ss_pred             ECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          119 INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       119 ~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ..+..++||||+.+.++..+.......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+|+.
T Consensus        80 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             cCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhc
Confidence            99999999999996444444444456899999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ...............||+.|||||++.+   +.++.++|||||||++|||+++ .+||.+.+..+++..+. ...++..|
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~~  235 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPEAISY---RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTP  235 (283)
T ss_dssp             --------------CCCGGGSCHHHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCC
T ss_pred             ccCCCccceEeccCCCCccccCHHHHcc---CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh-ccCCCCCc
Confidence            6443222222334568999999999874   4789999999999999999995 55566667777766554 45667788


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+|+++.+||.+||+.||++||++.||++.|+.+..
T Consensus       236 ~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         236 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999987653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-51  Score=417.83  Aligned_cols=262  Identities=24%  Similarity=0.394  Sum_probs=208.8

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc--hhhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK--EDCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .|+.++|++.++||+|+||+||+|+++.         .||||+++...  ....+.+ .++..++.++ +||||+.++++
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~~---------~vAvK~~~~~~~~~~~~~~~-~~E~~~l~~l-~HpnIv~~~~~   72 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKT-RHVNILLFMGY   72 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESSS---------EEEEEECCCSSCCTTHHHHH-HHHHHHHTTC-CCTTBCCEEEE
T ss_pred             ccccccEEEEEEEeeCCCcEEEEEEECC---------EEEEEEEEcccCCHHHHHHH-HHHHHHHHhC-CCCCEeeeeEE
Confidence            3889999999999999999999997532         59999997532  2333344 3444556665 79999999998


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +. ++.++|||||++ |+|.+++... +..+++..++.++.||+.||+|||+++||||||||+||||+.++.+||+|||+
T Consensus        73 ~~-~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGl  150 (276)
T d1uwha_          73 ST-APQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL  150 (276)
T ss_dssp             EC-SSSCEEEEECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCC
T ss_pred             Ee-ccEEEEEEecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccc
Confidence            64 567899999999 6888877543 45799999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc-cCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK-EKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~-~~p  274 (632)
                      |+...... .........||+.|||||++.....++|+.++|||||||+||||+||+.||.+.+............ ..+
T Consensus       151 a~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p  229 (276)
T d1uwha_         151 ATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP  229 (276)
T ss_dssp             SCC-------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC
T ss_pred             eeeccccC-CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC
Confidence            97653221 1223345679999999999976555678999999999999999999999999876554433333333 233


Q ss_pred             ---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 ---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                         ..+..+|+++.+||.+||+.||++|||+.+|++.|+.+.+
T Consensus       230 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence               3457899999999999999999999999999999988764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-50  Score=414.95  Aligned_cols=263  Identities=17%  Similarity=0.320  Sum_probs=215.8

Q ss_pred             CcCCCCeEEEeE-EcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhh-HHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           39 WIDPTSLKLKHR-IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        39 ~I~~~~y~l~~~-IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      .|..++|.+.+. ||+|+||+||+|.++.++.    ...||||++++..... .+.+. ++..++.++ +||||+.++++
T Consensus         4 ~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~----~~~vAvK~l~~~~~~~~~~~~~-~E~~il~~l-~HpnIv~l~g~   77 (285)
T d1u59a_           4 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKK----QIDVAIKVLKQGTEKADTEEMM-REAQIMHQL-DNPYIVRLIGV   77 (285)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---C----CEEEEEEEECSSCCHHHHHHHH-HHHHHHHHC-CCTTBCCEEEE
T ss_pred             eecccCeEECCcEEecccCeEEEEEEEecCCC----cEEEEEEEEChhcCHHHHHHHH-HHHHHHHhC-CCCCEeeEeee
Confidence            467788999984 9999999999998865432    2479999997654333 34444 444566666 79999999998


Q ss_pred             EEECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          117 SVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      +.. +.+||||||++| +|.+++.. .+..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        78 ~~~-~~~~lvmE~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGl  155 (285)
T d1u59a_          78 CQA-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL  155 (285)
T ss_dssp             EES-SSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTT
T ss_pred             ecc-CeEEEEEEeCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchh
Confidence            864 568999999995 77666543 346899999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      |+.+..............||+.|||||++..   +.++.++|||||||++|||+| |..||.+.+..++...+. ...++
T Consensus       156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~-~~~~~  231 (285)
T d1u59a_         156 SKALGADDSYYTARSAGKWPLKWYAPECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRM  231 (285)
T ss_dssp             CEECTTCSCEECCCCSSCCCGGGCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-TTCCC
T ss_pred             hhcccccccccccccccccCccccChHHHhC---CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            9876543322233344578999999999874   468999999999999999998 999999988877776665 45667


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..|..+|+++.+||.+||+.||++||++.+|++.|+...
T Consensus       232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         232 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            788999999999999999999999999999999887654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.8e-50  Score=417.81  Aligned_cols=249  Identities=21%  Similarity=0.296  Sum_probs=210.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        44 ~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .|++.+.||+|+||+||+|+++.++      +.||||++......  .....+.++..++.++ +||||+.+++++.+++
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~   88 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNS------EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREH   88 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETT
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCC------cEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECC
Confidence            4999999999999999999998766      48999999764322  1122233344556665 6999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      .+|||||||.|++++.+... ++.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        89 ~~~iv~E~~~~g~l~~~~~~-~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          89 TAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             EEEEEEECCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EEEEEEEecCCCchHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            99999999997766655443 46899999999999999999999999999999999999999999999999999975422


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                             ....+||+.|||||++.+...++|+.++|||||||++|||++|..||.+.+..+....+......+..+..+|
T Consensus       168 -------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s  240 (309)
T d1u5ra_         168 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWS  240 (309)
T ss_dssp             -------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSC
T ss_pred             -------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCC
Confidence                   2345799999999999765456789999999999999999999999999888887777765554444566799


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +++.+||.+||+.||.+|||+.|+++
T Consensus       241 ~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         241 EYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            99999999999999999999999875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-50  Score=410.20  Aligned_cols=257  Identities=21%  Similarity=0.400  Sum_probs=206.9

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |++++|++.+.||+|+||+||+|.++..       ..||||+++..... .+++.++. .++.++ +||||+.+++++..
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~~~-------~~vAvK~i~~~~~~-~~~~~~E~-~~l~~l-~HpnIv~~~g~~~~   71 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWLNK-------DKVAIKTIREGAMS-EEDFIEEA-EVMMKL-SHPKLVQLYGVCLE   71 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEETTT-------EEEEEEECCSSSSC-HHHHHHHH-HHHHHC-CCTTBCCEEEEECS
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEECCC-------CEEEEEEECCCcCc-HHHHHHHH-HHHHhc-CCCCcccccceecc
Confidence            7899999999999999999999997642       37999999764432 34454443 455555 69999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+||||||++ |+|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||+++++.+||+|||+|+.
T Consensus        72 ~~~~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  150 (263)
T d1sm2a_          72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF  150 (263)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC----
T ss_pred             CCceEEEEEecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchhee
Confidence            999999999998 6777776543 45789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......  .......||+.|||||++.+   ..++.++|||||||++|||+| |.+||...+..++...+. ...++..|
T Consensus       151 ~~~~~~--~~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~p  224 (263)
T d1sm2a_         151 VLDDQY--TSSTGTKFPVKWASPEVFSF---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKP  224 (263)
T ss_dssp             ----------------CTTSCCHHHHTT---CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH-HTCCCCCC
T ss_pred             ccCCCc--eeecceecCcccCChHHhcC---CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH-hcCCCCCc
Confidence            643221  12233578999999999974   368999999999999999999 577777777777777665 35566778


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..+++++.+||.+||+.||++|||+++|++.|+++.
T Consensus       225 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            899999999999999999999999999999998775

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=416.25  Aligned_cols=253  Identities=25%  Similarity=0.313  Sum_probs=201.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||+||+|+++.++      +.||||++.........+...++..++.++ +||||+.+++++.+++.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~   77 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNI   77 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECC-------CHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEehhhcchHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCce
Confidence            68999999999999999999998766      489999997644322222233444555555 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +||||||++| +|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||+++++.+||+|||+|+....
T Consensus        78 ~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~  155 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  155 (271)
T ss_dssp             EEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             eEEEEeccCCCcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeecc
Confidence            9999999985 78777743  45899999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhccCCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE-EIYHSVVIKKEKPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~-ei~~~i~~~~~~p~~p~~l  280 (632)
                      .. ........+||+.|||||++.+..  .++.++|||||||++|||++|+.||.+.+.. ..+..+............+
T Consensus       156 ~~-~~~~~~~~~GT~~Y~APE~~~~~~--~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (271)
T d1nvra_         156 NN-RERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI  232 (271)
T ss_dssp             TT-EECCBCCCCSCGGGSCTHHHHCSS--BCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGS
T ss_pred             CC-ccccccceeeCcCccCHhHhcCCC--CCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccC
Confidence            21 112234568999999999987431  2467899999999999999999999876533 2333333222223333578


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |+++.+||.+||+.||++|||++|+++
T Consensus       233 s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         233 DSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-50  Score=419.18  Aligned_cols=269  Identities=21%  Similarity=0.332  Sum_probs=211.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.++||+|+||+||+|++...+. ....+.||||+++.............+...+.++.+|+||+.+++++..
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~   88 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   88 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTS-SSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCc-ccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc
Confidence            788999999999999999999999876543 2344689999997644333333333344556677789999999888765


Q ss_pred             -CCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe
Q 006772          120 -NGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS  183 (632)
Q Consensus       120 -~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld  183 (632)
                       ++.+++|||||+ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+||||+
T Consensus        89 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          89 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS  168 (299)
T ss_dssp             TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC
Confidence             457899999998 68888876532              23589999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHH
Q 006772          184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEE  262 (632)
Q Consensus       184 ~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~e  262 (632)
                      +++.+||+|||+|+...... .........||+.|||||++.+   +.++.++|||||||++|||+++ ..||.+.+..+
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~---~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~  244 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  244 (299)
T ss_dssp             GGGCEEECC------CCSCT-TSCCTTSCCCGGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred             CCCcEEEccCcchhhccccc-cccccCceeeCccccchhHhhc---CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH
Confidence            99999999999998653322 1222344679999999999974   4689999999999999999986 56888876555


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          263 IYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       263 i~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .+..+......+..|..+++++.++|.+||+.||++|||+.|+++.|+.+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         245 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            555555667778889999999999999999999999999999999998764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-50  Score=417.74  Aligned_cols=253  Identities=19%  Similarity=0.308  Sum_probs=210.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|++++.||+|+||+||+|+++.++      +.||||++........+.+.++. .++..+ +||||+.+++++.+++.
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~E~-~il~~l-~HpnIv~l~~~~~~~~~   83 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETS------VLAAAKVIDTKSEEELEDYMVEI-DILASC-DHPNIVKLLDAFYYENN   83 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECSSSGGGGGTHHHH-HHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCC------eEEEEEEECcCCHHHHHHHHHHH-HHHHhC-CCCCCCeEEEEEeeCCe
Confidence            56899999999999999999998766      48999999765544444544443 455555 69999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +||||||++| +|.+++.+. .+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+....
T Consensus        84 ~~lvmEy~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~  162 (288)
T d2jfla1          84 LWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR  162 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHH
T ss_pred             EEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCC
Confidence            9999999985 666665543 46799999999999999999999999999999999999999999999999999976532


Q ss_pred             CCCCCCccccccCCCccCCccccCCC--CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-CCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-KPCIPS  278 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~--~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-~p~~p~  278 (632)
                      .   .......+||+.|||||++...  ....|+.++|||||||++|||++|+.||.+.+..+++..+..... ....|.
T Consensus       163 ~---~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  239 (288)
T d2jfla1         163 T---IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS  239 (288)
T ss_dssp             H---HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGG
T ss_pred             C---cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence            1   1122346899999999998543  234688999999999999999999999999888777777664322 233457


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          279 GLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       279 ~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .+|+++.+||.+||+.||++|||+.|+++
T Consensus       240 ~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         240 RWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            89999999999999999999999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-49  Score=422.69  Aligned_cols=279  Identities=24%  Similarity=0.378  Sum_probs=233.3

Q ss_pred             ccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccC
Q 006772           30 VATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRE  106 (632)
Q Consensus        30 ~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~  106 (632)
                      ...+......+  ++|++++.||+|+||+||+|+++.++      +.||||++.+...   ...+.+.+ +..++..+ +
T Consensus        30 ~~~~~~~~~~l--d~y~i~~~lG~G~fg~Vy~a~~~~~g------~~~AvK~i~~~~~~~~~~~~~~~~-E~~il~~l-~   99 (350)
T d1rdqe_          30 WETPSQNTAQL--DQFDRIKTLGTGSFGRVMLVKHKESG------NHYAMKILDKQKVVKLKQIEHTLN-EKRILQAV-N   99 (350)
T ss_dssp             HHSCCCCCCCG--GGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHH-HHHHHTTC-C
T ss_pred             ccccccCCCCc--cCeEEEEEeecCcCcEEEEEEECCCC------CEEEEEEEchHHccCHHHHHHHHH-HHHHHHHc-C
Confidence            33444444444  69999999999999999999998766      4899999864221   12223333 33455555 7


Q ss_pred             CCceeEeeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC
Q 006772          107 SQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH  185 (632)
Q Consensus       107 h~~I~~l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~  185 (632)
                      ||||+.+++++...+.+++||||+. |++.+.+...  +.+++..++.|+.||+.||.|||+++||||||||+|||++.+
T Consensus       100 hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~  177 (350)
T d1rdqe_         100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ  177 (350)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CCcEeecccccccccccccccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCC
Confidence            9999999999999999999999998 5677777554  479999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHH
Q 006772          186 DQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH  265 (632)
Q Consensus       186 g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~  265 (632)
                      |++||+|||+|+....      .....+||+.|||||++.+.   .++.++|||||||+||||++|..||.+.+..+++.
T Consensus       178 g~ikL~DFG~a~~~~~------~~~~~~Gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~  248 (350)
T d1rdqe_         178 GYIQVTDFGFAKRVKG------RTWTLCGTPEALAPEIILSK---GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE  248 (350)
T ss_dssp             SCEEECCCTTCEECSS------CBCCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCEEeeeceeeeeccc------ccccccCccccCCHHHHcCC---CCCccccccchhHHHHHHHhCCCCCCCcCHHHHHH
Confidence            9999999999987632      22346899999999999754   68899999999999999999999999999888888


Q ss_pred             HHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP-----LMADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       266 ~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RP-----s~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      .+.  ...+.+|..+++++.+||.+||+.||.+|+     +++++++      |++|.+.+|..+..+.+.+|+.|.
T Consensus       249 ~i~--~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~------Hp~f~~~~~~~~~~~~~~~p~~p~  317 (350)
T d1rdqe_         249 KIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN------HKWFATTDWIAIYQRKVEAPFIPK  317 (350)
T ss_dssp             HHH--HCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             HHh--cCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc------CccccCCCHHHHHhcCCCcCccCC
Confidence            776  345667889999999999999999999995     7888775      889999999999988888887664

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-50  Score=416.16  Aligned_cols=248  Identities=19%  Similarity=0.320  Sum_probs=207.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.++||+|+||+||+|.++.++      +.||||++........+.+.+ +..+++.+ +||||+.+++++.+++.
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~------~~vAvK~~~~~~~~~~~~~~~-E~~il~~l-~HpnIv~~~~~~~~~~~   91 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIIN-EILVMREN-KNPNIVNYLDSYLVGDE   91 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTC------CEEEEEEEEGGGCSCHHHHHH-HHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCC------CEEEEEEEecccChHHHHHHH-HHHHHHhC-CCCCEeeEeEEEEECCE
Confidence            57999999999999999999988766      489999997544433344433 44555555 79999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       123 l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      +||||||++| +|.+++.+   +.+++.+++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus        92 ~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1          92 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             EEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence            9999999985 66665533   4799999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc-CCCCCCCC
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE-KPCIPSGL  280 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~-~p~~p~~l  280 (632)
                      ..   ......+||+.|||||++.+.   +++.++|||||||++|||++|..||.+.+..+....+..... ....|..+
T Consensus       169 ~~---~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (293)
T d1yhwa1         169 EQ---SKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL  242 (293)
T ss_dssp             TT---CCBCCCCSCGGGCCHHHHSSS---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGS
T ss_pred             cc---ccccccccCCCccChhhhcCC---CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccC
Confidence            21   223456899999999999753   688999999999999999999999999887776665554332 34456789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          281 PPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       281 p~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      |+++++||.+||+.||++|||+.|+++
T Consensus       243 s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         243 SAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.6e-50  Score=427.05  Aligned_cols=277  Identities=17%  Similarity=0.310  Sum_probs=222.8

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhh--hccCCCceeEeeE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFP--KFRESQSVCWLHG  115 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~--~l~~h~~I~~l~~  115 (632)
                      ++.++|++.+.||+|+||.||+|+++.++      +.||||++.+...  ........++..++.  +..+||||+.+++
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~------~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~   74 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY   74 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEE
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCCC------CEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence            46789999999999999999999998766      4899999864221  111111222222222  2346999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++..++.+||||||++ |+|.+++...  ..+++..++.|+.||+.||+|||+++|+||||||+|||++.+|.+||+|||
T Consensus        75 ~~~~~~~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFG  152 (364)
T d1omwa3          75 AFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG  152 (364)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCT
T ss_pred             EEEECCEEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeec
Confidence            9999999999999998 6788877654  578999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHH-HhhccC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV-VIKKEK  273 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i-~~~~~~  273 (632)
                      +|+....     ......+||+.|||||++...  ..|+.++|||||||+||||++|+.||.+.+..+..... ......
T Consensus       153 la~~~~~-----~~~~~~~GT~~y~APE~~~~~--~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~  225 (364)
T d1omwa3         153 LACDFSK-----KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA  225 (364)
T ss_dssp             TCEECSS-----SCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCC
T ss_pred             eeeecCC-----CcccccccccccchhHHhhcC--CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC
Confidence            9986533     223456899999999998632  25789999999999999999999999876533222111 122445


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          274 PCIPSGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       274 p~~p~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      +.+|..+|+++.+||.+||++||++||+     ++|+++      +++|.+.+|..+..+...+|+.|.
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~------Hp~f~~i~~~~~~~~~~~~p~~p~  288 (364)
T d1omwa3         226 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE------SPFFRSLDWQMVFLQKYPPPLIPP  288 (364)
T ss_dssp             CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc------CccccCCCHHHHhcCCCCcCcCCC
Confidence            6677899999999999999999999998     577665      889999999999888887776553

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-50  Score=411.51  Aligned_cols=259  Identities=22%  Similarity=0.385  Sum_probs=212.5

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++.++||+|+||+||+|.++..       +.||||+++..... .+.+.++ ..++.++ +||||+.+++++
T Consensus         8 wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~-------~~vAvK~~~~~~~~-~~~~~~E-~~~l~~l-~HpnIv~~~g~~   77 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFGEVWMGYYNGH-------TKVAVKSLKQGSMS-PDAFLAE-ANLMKQL-QHQRLVRLYAVV   77 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTT-------EEEEEEEECTTSSC-HHHHHHH-HHHHHHC-CCTTBCCEEEEE
T ss_pred             eecCHHHeEEeEEEecCCCcEEEEEEECCC-------CEEEEEEEccCcCC-HHHHHHH-HHHHHhC-CCCCEeEEEeee
Confidence            348889999999999999999999997532       47999999764432 3444444 4556666 799999999987


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      . ++.+||||||++ |+|.+++......++++..++.++.||+.||.|||+++|+||||||+||||++++.+||+|||+|
T Consensus        78 ~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla  156 (272)
T d1qpca_          78 T-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA  156 (272)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             c-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccce
Confidence            5 456799999998 67777665554457999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +.......  .......||+.|||||++..   +.++.++|||||||+||||+|| .+||...+..++...+. ...++.
T Consensus       157 ~~~~~~~~--~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~-~~~~~~  230 (272)
T d1qpca_         157 RLIEDNEY--TAREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMV  230 (272)
T ss_dssp             EECSSSCE--ECCTTCCCCTTTSCHHHHHH---CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCC
T ss_pred             EEccCCcc--ccccccCCcccccChHHHhC---CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcCCCC
Confidence            87643211  12234578999999999874   4688999999999999999995 55666667777766654 456677


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      .|..+|+++.+||.+||+.||++|||+.+|++.|+...
T Consensus       231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            88999999999999999999999999999999887643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-50  Score=410.28  Aligned_cols=252  Identities=23%  Similarity=0.333  Sum_probs=199.9

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      .++|++.+.||+|+||+||+|+++.++      +.||||++..... ....+.+.++..++.++ +||||+.+++++.+ 
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~   75 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDG------KILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDR   75 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC-
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCC------CEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeC
Confidence            368999999999999999999998766      4899999976432 22222333344555555 79999999998864 


Q ss_pred             -CCEEEEEEecCC-CCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-----ceeeeeeCCeEEEecCCcEEE
Q 006772          120 -NGKICIAMKFYE-GSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIG-----LLVLNLKPSNLLLSEHDQLVL  190 (632)
Q Consensus       120 -~~~l~LVmEy~~-GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~-----IvHRDLKP~NILld~~g~vkL  190 (632)
                       ++.+||||||++ |+|.+++...  .++.+++..++.++.||+.||+|||+++     |+||||||+|||++.++.+||
T Consensus        76 ~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl  155 (269)
T d2java1          76 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL  155 (269)
T ss_dssp             ---CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEE
T ss_pred             CCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEE
Confidence             567899999998 5888887643  3468999999999999999999999976     999999999999999999999


Q ss_pred             EecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       191 ~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      +|||+|+.....   .......+||+.|||||++.+   ..|+.++|||||||++|||++|+.||.+.+..++...+.. 
T Consensus       156 ~DFG~a~~~~~~---~~~~~~~~gt~~Y~APE~l~~---~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~-  228 (269)
T d2java1         156 GDFGLARILNHD---TSFAKAFVGTPYYMSPEQMNR---MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE-  228 (269)
T ss_dssp             CCHHHHHHC--------------CCCSCCCHHHHTT---CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-
T ss_pred             eeccceeecccC---CCccccCCCCcccCCHHHHcC---CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc-
Confidence            999999875332   122345689999999999974   3689999999999999999999999999998888877754 


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...+.+|..+|+++.+||.+||+.||++|||+.|+++
T Consensus       229 ~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         229 GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            3445678899999999999999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-49  Score=408.09  Aligned_cols=263  Identities=21%  Similarity=0.362  Sum_probs=207.9

Q ss_pred             CcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        39 ~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      .|++++|++.+.||+|+||.||+|.+..++.   ....||||.++..........+.++..++.++ +||||+.+++++.
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~---~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~   78 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPEN---PALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT   78 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC-----CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             CcCHHHeEEEEEEeeCCCcEEEEEEEecCCc---eeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence            4778999999999999999999999876542   34579999987655444444344444556665 7999999999885


Q ss_pred             ECCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                       ++.+||||||++| ++.+++. .....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+
T Consensus        79 -~~~~~iv~E~~~~g~l~~~~~-~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          79 -ENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHH-HTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             -cCeEEEEEEeccCCcHHhhhh-ccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhhe
Confidence             5678999999985 5665554 345689999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      .......  .......||+.|||||++..   +.++.++|||||||++|||++ |.+||.+.+..+++..+.. ...+++
T Consensus       157 ~~~~~~~--~~~~~~~gt~~y~apE~l~~---~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~-~~~~~~  230 (273)
T d1mp8a_         157 YMEDSTY--YKASKGKLPIKWMAPESINF---RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPM  230 (273)
T ss_dssp             ----------------CCGGGCCHHHHHH---CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCCC
T ss_pred             eccCCcc--eeccceecCcccchhhHhcc---CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCC
Confidence            6533211  12234568999999999973   478999999999999999998 8999999988888777654 456678


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      |..+|+++.+||.+||+.||++|||+.||++.|+.+.
T Consensus       231 ~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            8999999999999999999999999999999888765

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-49  Score=414.12  Aligned_cols=249  Identities=22%  Similarity=0.366  Sum_probs=196.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|++.+.||+|+||+||+|+++.++      +.||||++.+.........+.++..++..+ +||||+.+++++.+++.
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~   81 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQ------KLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGH   81 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTC------CEEEEEEEEC----------CHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCC------CEEEEEEEchHHhhhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            56999999999999999999998766      489999997654333233333444555555 79999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe---cCCcEEEEecCCcee
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS---EHDQLVLGDFGIPYL  198 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld---~~g~vkL~DFGlak~  198 (632)
                      +|||||||+ |+|.+++..  .+.+++.+++.++.||+.||+|||+++|+||||||+|||+.   +++.+||+|||+|+.
T Consensus        82 ~~lvmE~~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~  159 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM  159 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred             EEEEEeccCCCcHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence            999999998 688888854  45899999999999999999999999999999999999995   578999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--C
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--I  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~  276 (632)
                      ....    ......+||+.|||||++.+.   .|+.++|||||||++|||++|..||.+.+..++...+........  .
T Consensus       160 ~~~~----~~~~~~~GT~~y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~  232 (307)
T d1a06a_         160 EDPG----SVLSTACGTPGYVAPEVLAQK---PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPY  232 (307)
T ss_dssp             -----------------CTTSCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTT
T ss_pred             ccCC----CeeeeeeeCccccCcHHHcCC---CCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCcc
Confidence            5322    223456899999999999753   689999999999999999999999999998888888775443332  3


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+|+++.+||.+||++||++|||+.|+++
T Consensus       233 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         233 WDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            4679999999999999999999999999886

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-49  Score=403.15  Aligned_cols=249  Identities=22%  Similarity=0.348  Sum_probs=202.3

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc-hhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK-EDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +.+.|++.++||+|+||+||+|.++.++      ..||+|++.... .....+.+.++..+++++ +||||+++++++..
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~~~------~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~   79 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWES   79 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECCCC------eEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEee
Confidence            3445689999999999999999998765      489999986543 122222334444566665 69999999999865


Q ss_pred             ----CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeeeeeCCeEEEe-cCCcEEEE
Q 006772          120 ----NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIG--LLVLNLKPSNLLLS-EHDQLVLG  191 (632)
Q Consensus       120 ----~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~--IvHRDLKP~NILld-~~g~vkL~  191 (632)
                          ++.+||||||++ |+|.+++.+.  +.+++.+++.++.||+.||+|||+++  |+||||||+|||++ +++.+||+
T Consensus        80 ~~~~~~~~~ivmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~  157 (270)
T d1t4ha_          80 TVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG  157 (270)
T ss_dssp             ESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred             ccccCCEEEEEEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEe
Confidence                456899999998 5787877654  47999999999999999999999998  99999999999996 57899999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~-~~ei~~~i~~~  270 (632)
                      |||+|+....     ......+||+.|||||++.+    +++.++|||||||++|||++|+.||.+.. ..+++..+...
T Consensus       158 DFGla~~~~~-----~~~~~~~GT~~Y~aPE~~~~----~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~  228 (270)
T d1t4ha_         158 DLGLATLKRA-----SFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG  228 (270)
T ss_dssp             CTTGGGGCCT-----TSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred             ecCcceeccC-----CccCCcccCccccCHHHhCC----CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcC
Confidence            9999975322     22345689999999999853    58999999999999999999999998764 55555555544


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..++.++..+++++.+||.+||+.||++|||++|+++
T Consensus       229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         229 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            4444566788999999999999999999999999886

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-50  Score=419.55  Aligned_cols=251  Identities=21%  Similarity=0.366  Sum_probs=201.4

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |..++|++.++||+|+||+||+|+++.++      +.||||+++............++..++..+ +||||+.+++++.+
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~   75 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS   75 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTT------EEEEEEEEECCCCTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEEC
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEChhhCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            45689999999999999999999998765      489999997654333333334444556655 79999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          120 NGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       120 ~~~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ++.+||||||++| +|.+++.+.  +.+++..++.++.||+.||.|||+ ++|+||||||+|||++.+|.+||+|||+|+
T Consensus        76 ~~~~~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~  153 (322)
T d1s9ja_          76 DGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG  153 (322)
T ss_dssp             SSEEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             CCEEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCcc
Confidence            9999999999995 777777654  479999999999999999999997 499999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHH-----------
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHS-----------  266 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~-----------  266 (632)
                      ....     ....+.+||+.|||||++.+.   +|+.++|||||||++|||++|+.||.+.+..+....           
T Consensus       154 ~~~~-----~~~~~~~GT~~Y~APEvl~~~---~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~  225 (322)
T d1s9ja_         154 QLID-----SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE  225 (322)
T ss_dssp             HHHH-----HTC---CCSSCCCCHHHHHCS---CCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------
T ss_pred             ccCC-----CccccccCCccccCchHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCccc
Confidence            6532     223456899999999999854   689999999999999999999999987553221000           


Q ss_pred             ------------------------------HHhhccCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          267 ------------------------------VVIKKEKPCIP-SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       267 ------------------------------i~~~~~~p~~p-~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                    .......+..+ ..+++++.+||.+||+.||++|||++|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             --------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                                          00111222233 246889999999999999999999999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-49  Score=405.46  Aligned_cols=261  Identities=22%  Similarity=0.321  Sum_probs=208.0

Q ss_pred             cCCCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           40 IDPTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        40 I~~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ++.+.+.+.. +||+|+||+||+|.++...    ..+.||||+++....+ ...+.+.++..++.++ +||||+.+++++
T Consensus         3 ld~~~~~le~k~iG~G~fG~Vy~~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~   77 (277)
T d1xbba_           3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKK----VVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC   77 (277)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSS----SEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             echhhCeecCCCcccCCCeEEEEEEEccCC----cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-CCCCCceEEEEe
Confidence            4566677764 6999999999999875432    2368999999754322 2222233444556665 799999999998


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCc
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIP  196 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGla  196 (632)
                      .. +..||||||++ |+|.+++.+  ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|
T Consensus        78 ~~-~~~~lvmE~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla  154 (277)
T d1xbba_          78 EA-ESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS  154 (277)
T ss_dssp             ES-SSEEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             cc-CCEEEEEEcCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhh
Confidence            64 56789999998 577777654  357999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCC
Q 006772          197 YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC  275 (632)
Q Consensus       197 k~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~  275 (632)
                      +................||+.|||||++.+   +.++.++|||||||++|||++ |+.||.+.+..++...+. ...++.
T Consensus       155 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~---~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~-~~~~~~  230 (277)
T d1xbba_         155 KALRADENYYKAQTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMG  230 (277)
T ss_dssp             EECCTTCSEEEC----CCCGGGCCHHHHHH---CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCC
T ss_pred             hhccccccccccccccCCCceecCchhhcC---CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHH-cCCCCC
Confidence            876443222222334578999999999974   468999999999999999998 899999998888776655 456777


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       276 ~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      .|..+|+++.+||.+||+.||++|||+++|++.|+..
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            8899999999999999999999999999998877654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-49  Score=403.22  Aligned_cols=255  Identities=18%  Similarity=0.304  Sum_probs=215.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ||+++|++.++||+|+||+||+|+++. +      +.||||++++.... .+.+.++. .++.++ +||||+++++++.+
T Consensus         1 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~-~------~~vAvK~l~~~~~~-~~~~~~Ev-~~~~~l-~HpnIv~~~g~~~~   70 (258)
T d1k2pa_           1 IDPKDLTFLKELGTGQFGVVKYGKWRG-Q------YDVAIKMIKEGSMS-EDEFIEEA-KVMMNL-SHEKLVQLYGVCTK   70 (258)
T ss_dssp             CCCCCCCCCCCCCEETTEEEEEEEETT-T------EEEEEEEEESSSSC-HHHHHHHH-HHHHTC-CCTTBCCEEEEECC
T ss_pred             CChHHCEEeEEEecCCCeEEEEEEECC-C------CEEEEEEECcCcCC-HHHHHHHH-HHHHhc-CCCceeeEEEEEee
Confidence            578999999999999999999999853 2      47999999865433 34454443 455555 79999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      ++.+++||||+. |++.+++.. ....+++..+++++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        71 ~~~~~iv~Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~  149 (258)
T d1k2pa_          71 QRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY  149 (258)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCB
T ss_pred             CCceEEEEEccCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhhee
Confidence            999999999998 566666544 345789999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCCC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP  277 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~p  277 (632)
                      ......  .......||+.|||||.+..   ..++.++|||||||++|||+| |+.||.+.+..++...+.. ..++..|
T Consensus       150 ~~~~~~--~~~~~~~~t~~y~aPE~~~~---~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~-~~~~~~p  223 (258)
T d1k2pa_         150 VLDDEY--TSSVGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRP  223 (258)
T ss_dssp             CSSSSC--CCCCCSCCCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-TCCCCCC
T ss_pred             ccCCCc--eeecccCCCCCcCCcHHhcC---CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh-CCCCCCc
Confidence            543221  22334578999999999974   368999999999999999998 8999999998888877754 5567788


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFES  311 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~  311 (632)
                      ..+++++.+||.+||+.||++|||+.+|++.|.+
T Consensus       224 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            9999999999999999999999999999998754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-49  Score=405.48  Aligned_cols=263  Identities=19%  Similarity=0.299  Sum_probs=212.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch------hhHHHHHHHHHHHhhhccCCCceeEeeEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE------DCAKVFVNKFEELFPKFRESQSVCWLHGI  116 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~------~~~~~~~~~~~~il~~l~~h~~I~~l~~~  116 (632)
                      ++|++++.||+|+||+||+|+++.++      +.||||++.+...      ...+.+. ++..++.++ +||||+.++++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~------~~~AvK~i~~~~~~~~~~~~~~~~~~-~E~~il~~l-~HpnIv~~~~~   81 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTG------LQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI-QHPNVITLHEV   81 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEBCSSTTCSSSBCHHHHH-HHHHHHHHC-CCTTBCCEEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCC------CEEEEEEEEhhhcchhhhhHHHHHHH-HHHHHHHhC-CCCCCCcEEEE
Confidence            57999999999999999999998766      4899999865321      1123333 344555665 69999999999


Q ss_pred             EEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC----cEEEE
Q 006772          117 SVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD----QLVLG  191 (632)
Q Consensus       117 ~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g----~vkL~  191 (632)
                      +.+++.+|||||||+ |+|.+++.+.  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++    .+||+
T Consensus        82 ~~~~~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~  159 (293)
T d1jksa_          82 YENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII  159 (293)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEEC
T ss_pred             EEECCEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEec
Confidence            999999999999998 5888887654  4799999999999999999999999999999999999999877    59999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK  271 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~  271 (632)
                      |||+|+.....    .......||+.|||||++.+.   .++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus       160 DfG~a~~~~~~----~~~~~~~~t~~y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~  232 (293)
T d1jksa_         160 DFGLAHKIDFG----NEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  232 (293)
T ss_dssp             CCTTCEECTTS----CBCSCCCCCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC
T ss_pred             chhhhhhcCCC----ccccccCCCCcccCHHHHcCC---CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcC
Confidence            99999876332    223446789999999999743   68899999999999999999999999999888887776443


Q ss_pred             cCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCccccccc
Q 006772          272 EKPC--IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSR  328 (632)
Q Consensus       272 ~~p~--~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~~~~~~  328 (632)
                      ....  .+..+|+++.+||.+||+.||++|||++|+++      ++++...+|....++
T Consensus       233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~------hp~~~~~~~~~~l~~  285 (293)
T d1jksa_         233 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ------HPWIKPKDTQQALSS  285 (293)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH------STTTCC---------
T ss_pred             CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc------CcccCCCChhHhhcc
Confidence            3221  23679999999999999999999999999886      778877777654433

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-49  Score=407.68  Aligned_cols=272  Identities=21%  Similarity=0.321  Sum_probs=221.0

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCc-ccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDF-DEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~-~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      ...|+.++|++++.||+|+||.||+|++..+++.. .....||||++++............+...+.++.+||||+.+++
T Consensus         7 ~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~   86 (299)
T d1fgka_           7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG   86 (299)
T ss_dssp             TTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccc
Confidence            44488999999999999999999999987654321 23458999999775543333333444455667778999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQR--------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~~--------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      ++.+++.+++||||++ |++.+++....              ...+++.+++.++.||+.||+|||+++||||||||+||
T Consensus        87 ~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  166 (299)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccce
Confidence            9999999999999998 68888876442              24689999999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKS  259 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~  259 (632)
                      |++.++.+||+|||+++....... ........||+.|||||.+.+   +.|+.++|||||||++|||++ |.+||.+.+
T Consensus       167 Ll~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~l~~---~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~  242 (299)
T d1fgka_         167 LVTEDNVMKIADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  242 (299)
T ss_dssp             EECTTCCEEECSTTCCCCGGGCCT-TCCCTTSCCGGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             eecCCCCeEeccchhhcccccccc-ccccccCCCChhhhhhhHhcC---CCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence            999999999999999987643322 223344678999999999974   479999999999999999998 799999988


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ..+++..+. ....+..|..+|+++.+||.+||+.||++|||+.||++.|+.+.
T Consensus       243 ~~~~~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         243 VEELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHHHHH-TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-cCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            888776654 45677789999999999999999999999999999999998765

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-49  Score=406.93  Aligned_cols=265  Identities=25%  Similarity=0.427  Sum_probs=211.9

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEee
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWLH  114 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l~  114 (632)
                      ..|+.++|++.+.||+|+||+||+|++....   .....||||++.+..   ....+.+.++ ..++.++ +||||+.++
T Consensus         3 ~~i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~---~~~~~vAiK~l~~~~~~~~~~~~~~~~E-i~~l~~l-~H~nIv~~~   77 (273)
T d1u46a_           3 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPS---GKTVSVAVKCLKPDVLSQPEAMDDFIRE-VNAMHSL-DHRNLIRLY   77 (273)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTT---SCEEEEEEEC--------CHHHHHHHHH-HHHHHHC-CCTTBCCEE
T ss_pred             eEEchHHeEEEEEEecCCCeEEEEEEEECCC---CcEEEEEEEEEChhhcCCHHHHHHHHHH-HHHHHhC-CCCCEEEEE
Confidence            4688899999999999999999999876543   233579999987532   2223344444 3556666 799999999


Q ss_pred             EEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          115 GISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       115 ~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      +++.+ +..++||||++ |++.+.+... .+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        78 g~~~~-~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~Df  155 (273)
T d1u46a_          78 GVVLT-PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF  155 (273)
T ss_dssp             EEECS-SSCEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCC
T ss_pred             EEEee-cchheeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccc
Confidence            99965 56789999998 6777776654 357999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcc
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      |+++................||..|||||++.+.   .++.++|||||||++|||+| |..||.+.+..++...+.....
T Consensus       156 Gl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~  232 (273)
T d1u46a_         156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE  232 (273)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC
T ss_pred             hhhhhcccCCCcceecCccccCcccCCHHHHhCC---CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCC
Confidence            9998764432222222344678899999999744   68899999999999999998 8999999999998888887777


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      +++.+..+|+++.+||.+||+.||++|||+.+|++.|+++
T Consensus       233 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            7888899999999999999999999999999999988764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.1e-48  Score=413.35  Aligned_cols=259  Identities=22%  Similarity=0.367  Sum_probs=216.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++++.||+|+||.||+|+++.++      +.||||++........+. +.++..++.++ +||||+.+++++.+++.
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g------~~vAvK~i~~~~~~~~~~-~~~E~~il~~l-~HpnIv~~~~~~~~~~~   97 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATG------NNFAAKFVMTPHESDKET-VRKEIQTMSVL-RHPTLVNLHDAFEDDNE   97 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEECCCSHHHHHH-HHHHHHHHHHT-CCTTBCCEEEEEEETTE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEcccchhhHHH-HHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            68999999999999999999998765      489999997665544343 34444566666 69999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec--CCcEEEEecCCceec
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE--HDQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~--~g~vkL~DFGlak~~  199 (632)
                      +|||||||+ |+|.+++... .+.+++.+++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+|+.+
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence            999999998 5787877543 457999999999999999999999999999999999999964  678999999999876


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p  277 (632)
                      ...    .......||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+........  ..
T Consensus       177 ~~~----~~~~~~~gT~~Y~aPEv~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  249 (350)
T d1koaa2         177 DPK----QSVKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF  249 (350)
T ss_dssp             CTT----SCEEEECSCTTTCCHHHHHTC---CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGG
T ss_pred             ccc----cccceecCcccccCHHHHcCC---CCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence            432    223456899999999999754   688999999999999999999999999998888888765433322  22


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCCcc
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWT  323 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~w~  323 (632)
                      ..+|+++.+||.+||+.||++|||++|+++      ++++....|.
T Consensus       250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~------hp~~~~~~~~  289 (350)
T d1koaa2         250 SGISEDGKDFIRKLLLADPNTRMTIHQALE------HPWLTPGNAP  289 (350)
T ss_dssp             GGCCHHHHHHHHHHCCSSGGGSCCHHHHHH------STTTSCTTCC
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc------CcccCCCCCC
Confidence            568999999999999999999999999887      6777665554

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=406.22  Aligned_cols=267  Identities=19%  Similarity=0.287  Sum_probs=219.9

Q ss_pred             CCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeE
Q 006772           36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG  115 (632)
Q Consensus        36 ~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~  115 (632)
                      .-|+|+.++|++.+.||+|+||+||+|+++.++.    ...||||.+.........+.+.++..++.++.+||||+++++
T Consensus         3 ~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~   78 (309)
T d1fvra_           3 IYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGL----RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG   78 (309)
T ss_dssp             CSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTE----EEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEE
T ss_pred             CCCccCHHHcEEEEEEeeCCCcEEEEEEECCCCe----EEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEE
Confidence            4578999999999999999999999999876543    136889988654333223233444566777778999999999


Q ss_pred             EEEECCEEEEEEecCC-CCHHHHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeE
Q 006772          116 ISVINGKICIAMKFYE-GSVGDRIAQQ--------------RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNL  180 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~-GsL~d~l~~~--------------~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NI  180 (632)
                      ++.+++.++|||||++ |+|.+++...              ....+++..++.++.||+.||.|||+++|+||||||+||
T Consensus        79 ~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NI  158 (309)
T d1fvra_          79 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI  158 (309)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceE
Confidence            9999999999999999 7888887543              236799999999999999999999999999999999999


Q ss_pred             EEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCC
Q 006772          181 LLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKS  259 (632)
Q Consensus       181 Lld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~  259 (632)
                      |++.++.+||+|||+|+.....    .......||..|+|||.+..   +.++.++|||||||++|||++| .+||.+.+
T Consensus       159 L~~~~~~~kl~DfG~a~~~~~~----~~~~~~~gt~~y~aPE~l~~---~~~~~~sDvwSfGvil~ell~~~~~p~~~~~  231 (309)
T d1fvra_         159 LVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT  231 (309)
T ss_dssp             EECGGGCEEECCTTCEESSCEE----CCC----CCTTTCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             EEcCCCceEEcccccccccccc----ccccceecCCcccchHHhcc---CCCCccceeehhHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999999754321    11233468999999999974   4789999999999999999996 56788888


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       260 ~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ..+++..+. ...++..|..+|+++.+||.+||+.||++|||+.||++.|+.+..
T Consensus       232 ~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         232 CAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             HHHHHHHGG-GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-hcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            888877765 456777889999999999999999999999999999999988754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.4e-48  Score=411.15  Aligned_cols=250  Identities=20%  Similarity=0.315  Sum_probs=210.6

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++++.||+|+||.||+|.++.++      +.||||++.+........+. ++..++..+ +||||+.+++++..++
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~~~~~~-~Ei~il~~l-~HpnIv~~~~~~~~~~   99 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATG------RVFVAKFINTPYPLDKYTVK-NEISIMNQL-HHPKLINLHDAFEDKY   99 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSHHHHHHHH-HHHHHHTTC-CSTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCC------CEEEEEEECCcchhHHHHHH-HHHHHHHhC-CCCCCCcEEEEEEECC
Confidence            367999999999999999999998766      48999999765544433333 344556665 7999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEe--cCCcEEEEecCCcee
Q 006772          122 KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLS--EHDQLVLGDFGIPYL  198 (632)
Q Consensus       122 ~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld--~~g~vkL~DFGlak~  198 (632)
                      .+|||||||+ |+|.+.+.. .+.++++.+++.++.||+.||+|||++||+||||||+||||+  .++.+||+|||+|+.
T Consensus       100 ~~~ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~  178 (352)
T d1koba_         100 EMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  178 (352)
T ss_dssp             EEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeeccccee
Confidence            9999999998 577776643 345799999999999999999999999999999999999998  678999999999987


Q ss_pred             ccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC--CC
Q 006772          199 LLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP--CI  276 (632)
Q Consensus       199 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p--~~  276 (632)
                      +...    .......||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+.+..+......+  ..
T Consensus       179 ~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~  251 (352)
T d1koba_         179 LNPD----EIVKVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA  251 (352)
T ss_dssp             CCTT----SCEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST
T ss_pred             cCCC----CceeeccCcccccCHHHHcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc
Confidence            6432    223456799999999999754   68999999999999999999999999999888887776543322  23


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +..+|+++.+||.+||+.||.+|||+.|+++
T Consensus       252 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         252 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            4679999999999999999999999999876

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-48  Score=402.02  Aligned_cols=263  Identities=22%  Similarity=0.390  Sum_probs=209.9

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeE
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCW  112 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~  112 (632)
                      .....+.|+.++|++.+.||+|+||+||+|+++.+       ..||||+++..... .+.+.++. .++.++ +|+||+.
T Consensus         7 ~~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-------~~vAiK~l~~~~~~-~~~~~~E~-~~l~~l-~h~nIv~   76 (285)
T d1fmka3           7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKTLKPGTMS-PEAFLQEA-QVMKKL-RHEKLVQ   76 (285)
T ss_dssp             SSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-------EEEEEEECCTTSSC-HHHHHHHH-HHHHHC-CCTTBCC
T ss_pred             CCCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-------CEEEEEEECcccCC-HHHHHHHH-HHHHhc-ccCCEeE
Confidence            34445678899999999999999999999998654       36999999754432 34454443 445554 7899999


Q ss_pred             eeEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          113 LHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       113 l~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                      +++++. ++.+++||||++ |++.+++.......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+
T Consensus        77 ~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~  155 (285)
T d1fmka3          77 LYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA  155 (285)
T ss_dssp             EEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEEEEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEc
Confidence            999884 566899999999 567777766555679999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+|+.......  .......||+.|||||++.   .+.++.++|||||||++|||++| .+||.+....++...+.. 
T Consensus       156 DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-  229 (285)
T d1fmka3         156 DFGLARLIEDNEY--TARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-  229 (285)
T ss_dssp             CCCTTC----------------CCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-
T ss_pred             ccchhhhccCCCc--eeeccccccccccChHHHh---CCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-
Confidence            9999986533211  1223456899999999997   34789999999999999999995 555666677777766653 


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhh
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS  312 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~  312 (632)
                      ..++..+..+|+++.++|.+||+.||++||++.+|++.|+..
T Consensus       230 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         230 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             cCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence            456668899999999999999999999999999999888653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-48  Score=404.16  Aligned_cols=269  Identities=23%  Similarity=0.336  Sum_probs=223.3

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      |+.++|++.++||+|+||.||+|+++.... ....+.||||++++.........+.++..++.++.+||||+++++++..
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~   98 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSS-TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEecccc-CCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee
Confidence            788999999999999999999999864322 1455799999998755443343344445666777789999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEE
Q 006772          120 NGKICIAMKFYE-GSVGDRIAQQR----------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLL  182 (632)
Q Consensus       120 ~~~l~LVmEy~~-GsL~d~l~~~~----------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILl  182 (632)
                      ++.++|||||++ |+|.+++....                ...+++.+++.++.||+.||+|||+++|+||||||+|||+
T Consensus        99 ~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~  178 (311)
T d1t46a_          99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL  178 (311)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc
Confidence            999999999998 57777776532                2368999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHH
Q 006772          183 SEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE  261 (632)
Q Consensus       183 d~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~  261 (632)
                      +.++.+||+|||+++...... .........||+.|||||++.   .+.++.++|||||||++|||+| |.+||.+.+..
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~  254 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCT-TSEECSSSEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             cccCcccccccchheeccCCC-cceEeeecccChHHcCHHHhc---CCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999998653321 112233457899999999997   3478999999999999999999 67777777766


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       262 ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      +.+..++....++..|..+|+++.+||.+||+.||++|||+.+|++.|++..
T Consensus       255 ~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         255 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            6666666777888888999999999999999999999999999999998654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.7e-48  Score=394.83  Aligned_cols=258  Identities=20%  Similarity=0.314  Sum_probs=202.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch---hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE---DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      ++|++.+.||+|+||+||+|++..++      +.||||++++...   .....+.+ +..++.. .+||||+.+++++..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~~-E~~~l~~-~~hpniv~~~~~~~~   78 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLH------RDVAVKVLRADLARDPSFYLRFRR-EAQNAAA-LNHPAIVAVYDTGEA   78 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSTTTTCHHHHHHHHH-HHHHHHT-CCCTTBCCEEEEEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCC------CEEEEEEEchhhccCHHHHHHHHH-HHHHHHh-cCCCCCCcccceeee
Confidence            67999999999999999999998766      4899999976432   22223333 3344444 589999999999876


Q ss_pred             CC----EEEEEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecC
Q 006772          120 NG----KICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFG  194 (632)
Q Consensus       120 ~~----~l~LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFG  194 (632)
                      ++    .+||||||++| +|.+.+...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++.++..+|+|||
T Consensus        79 ~~~~~~~~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~  156 (277)
T d1o6ya_          79 ETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG  156 (277)
T ss_dssp             ECSSSEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCT
T ss_pred             ccCCCceEEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhh
Confidence            43    48999999995 666666543  589999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC
Q 006772          195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       195 lak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      +++...............+||+.|||||++.+   ..++.++|||||||++|||+||..||.+.+..++...+......+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~---~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~  233 (277)
T d1o6ya_         157 IARAIADSGNSVTQTAAVIGTAQYLSPEQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP  233 (277)
T ss_dssp             TCEECC----------------TTCCHHHHTT---CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC
T ss_pred             hhhhhccccccccccccccCcccccCHHHHcC---CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCC
Confidence            98765443323333455689999999999974   368999999999999999999999999999888777766443332


Q ss_pred             --CCCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhhh
Q 006772          275 --CIPSGLPPAVENVIIGCFEYDLRNRP-LMADILHAFESSQ  313 (632)
Q Consensus       275 --~~p~~lp~~l~~LI~~cL~~DP~~RP-s~~ell~~Le~~~  313 (632)
                        ..+..+|+++.++|.+||++||.+|| +++++++.|..+.
T Consensus       234 ~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence              23467999999999999999999999 8999999887664

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-47  Score=395.11  Aligned_cols=254  Identities=20%  Similarity=0.252  Sum_probs=213.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--------hHHHHHHHHHHHhhhccCCCceeEe
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--------CAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--------~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      .++|++.+.||+|+||+||+|+++.++      +.||||++.+....        ...+...++..+++++..||||+.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~------~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~   75 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTC------KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   75 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCC------CEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence            378999999999999999999987765      58999999764311        1122233455667788789999999


Q ss_pred             eEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++.+++.+||||||++ |+|.+++...  +.+++.+++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        76 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~D  153 (277)
T d1phka_          76 KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD  153 (277)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             EeecccCcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEcc
Confidence            999999999999999998 5888888654  4899999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCC---CCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI  269 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~  269 (632)
                      ||+++.....    .......||+.|+|||.+.+.   ....++.++||||+||++|||++|+.||.+.+..+....+..
T Consensus       154 FG~a~~~~~~----~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~  229 (277)
T d1phka_         154 FGFSCQLDPG----EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS  229 (277)
T ss_dssp             CTTCEECCTT----CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             chheeEccCC----CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHh
Confidence            9999876432    122446799999999998642   234578899999999999999999999999998888877775


Q ss_pred             hccCCCC--CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          270 KKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       270 ~~~~p~~--p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ....+..  ...+|+++.+||.+||+.||++||++.|+++
T Consensus       230 ~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         230 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            5443332  2479999999999999999999999999876

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-48  Score=403.67  Aligned_cols=264  Identities=21%  Similarity=0.348  Sum_probs=208.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      +..++|++++.||+|+||+||+|.+..+++  .....||+|.++..... ..+.+.+ +..++.++ +||||+.+++++.
T Consensus         6 ~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~-E~~~l~~l-~HpnIv~l~g~~~   81 (317)
T d1xkka_           6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE--KVKIPVAIKELREATSPKANKEILD-EAYVMASV-DNPHVCRLLGICL   81 (317)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECC------CCEEEEEEEECC----CTHHHHHH-HHHHHHHC-CCTTBCCEEEEEE
T ss_pred             CCHHHCEEeeEEecCCCeEEEEEEEcCCCC--EEEEEEEEEEeccccCHHHHHHHHH-HHHHHHhC-CCCCEeeEEEEEe
Confidence            456789999999999999999999887654  12246999998754332 3334444 44556665 7999999999987


Q ss_pred             ECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          119 INGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       119 ~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      +++ .+++|||+. |+|.+.+... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+
T Consensus        82 ~~~-~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_          82 TST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             SSS-EEEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             cCC-eeEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccce
Confidence            654 566667776 7888877654 5689999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCCCC
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI  276 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p~~  276 (632)
                      ....... ........||+.|||||++.+   +.++.++|||||||+||||+| |..||.+.+..++...+. .+.++..
T Consensus       160 ~~~~~~~-~~~~~~~~gt~~y~APE~l~~---~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~-~~~~~~~  234 (317)
T d1xkka_         160 LLGAEEK-EYHAEGGKVPIKWMALESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQ  234 (317)
T ss_dssp             HTTTTCC---------CCTTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHH-HTCCCCC
T ss_pred             ecccccc-cccccccccCccccChHHHhc---CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCC
Confidence            7543221 112233468999999999974   478999999999999999998 899999888777765554 4566778


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       277 p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      |..+|+++.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       235 p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         235 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            89999999999999999999999999999998877653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-48  Score=402.99  Aligned_cols=269  Identities=19%  Similarity=0.308  Sum_probs=219.7

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      .++..++|++.+.||+|+||+||+|+++... +...++.||||+++..........+.++..+++.+ +|+||+.+++++
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~   85 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLL-PYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVC   85 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSS-TTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCc-cCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-CCCCcccceeee
Confidence            3456789999999999999999999986432 12345689999997654443333334444556665 799999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeee
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR----------------------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLN  174 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~----------------------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRD  174 (632)
                      ...+..+++|||++ |+|.+++....                      ...+++..++.++.||+.||+|||+++|||||
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            99999999999998 78888875431                      13488999999999999999999999999999


Q ss_pred             eeCCeEEEecCCcEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCC-C
Q 006772          175 LKPSNLLLSEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI-Q  253 (632)
Q Consensus       175 LKP~NILld~~g~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~-~  253 (632)
                      |||+|||+|.++.+||+|||+|+....... ........||+.|||||.+.+   ..++.++|||||||++|||++|. +
T Consensus       166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         166 LATRNCLVGENMVVKIADFGLSRNIYSADY-YKADGNDAIPIRWMPPESIFY---NRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGC-BC----CCBCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EcccceEECCCCcEEEccchhheeccCCcc-ccccCCCCcCcCcCCHHHHcc---CCCChhhhhccchhhHHHHHccCCC
Confidence            999999999999999999999986533221 122334678999999999974   47899999999999999999985 6


Q ss_pred             CCCCCCHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          254 PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       254 PF~~~~~~ei~~~i~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                      ||.+.+..++...+.. ...+..|..+|+++.+||.+||+.||++||||.||++.|+.+.
T Consensus       242 p~~~~~~~e~~~~v~~-~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         242 PYYGMAHEEVIYYVRD-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTTTSCHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHc-CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            8988888888877654 4567788999999999999999999999999999999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-48  Score=393.23  Aligned_cols=255  Identities=24%  Similarity=0.393  Sum_probs=209.4

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|+.++|++++.||+|+||.||+|.++.        ..||||++++...  .+.+.++ ..++.++ +||||+.+++++
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--------~~vAvK~i~~~~~--~~~~~~E-~~~l~~l-~HpnIv~~~g~~   69 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCIKNDAT--AQAFLAE-ASVMTQL-RHSNLVQLLGVI   69 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETT--------EEEEEEECCCCC----HHHHHT-HHHHTTC-CCTTBCCEEEEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEECC--------eEEEEEEECcHHH--HHHHHHH-HHHHHhC-CCCCEeeEEEEE
Confidence            45888999999999999999999999742        3799999975432  2444444 4556666 799999999988


Q ss_pred             EE-CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          118 VI-NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       118 ~~-~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                      .. ++.+||||||++ |+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus        70 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~  149 (262)
T d1byga_          70 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL  149 (262)
T ss_dssp             CCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred             EecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeeccccc
Confidence            64 466899999998 6888888665445689999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhccCC
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP  274 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~Emlt-G~~PF~~~~~~ei~~~i~~~~~~p  274 (632)
                      ++....      ......+|+.|||||++.+   +.++.++|||||||++|||+| |+.||.+.+..++...+. ...++
T Consensus       150 s~~~~~------~~~~~~~~~~y~aPE~l~~---~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~-~~~~~  219 (262)
T d1byga_         150 TKEASS------TQDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKM  219 (262)
T ss_dssp             ------------------CCTTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCCC
T ss_pred             ceecCC------CCccccccccCCChHHHhC---CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            986432      1223467999999999874   478999999999999999998 799999988888777764 45677


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       275 ~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      .+|..+++++.+||.+||+.||.+|||+.++++.|+.++.
T Consensus       220 ~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         220 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            8899999999999999999999999999999999988764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-47  Score=393.31  Aligned_cols=260  Identities=18%  Similarity=0.288  Sum_probs=208.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhc--cCCCceeEeeEEEE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKF--RESQSVCWLHGISV  118 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l--~~h~~I~~l~~~~~  118 (632)
                      ++|+++++||+|+||+||+|++..++.     +.||||+++....  .....+.++. .+++.+  .+||||+.+++++.
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~E~-~~l~~l~~~~HpnIv~~~~~~~   80 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREV-AVLRHLETFEHPNVVRLFDVCT   80 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTT-----EEEEEEEEEEEBCTTSCBCTHHHHH-HHHHHHHHTCCTTBCCEEEEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCC-----EEEEEEEEehhhccchHHHHHHHHH-HHHHHHhhcCCCCcceeeeeec
Confidence            689999999999999999999876542     4799999864221  1111222332 333333  37999999999886


Q ss_pred             E-----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          119 I-----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       119 ~-----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .     +..++++|||+.|+++.+........+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             EEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             ccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecch
Confidence            3     35789999999998887776666678999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+++....    ........||+.|||||++.+   .+|+.++|||||||++|||++|+.||.+.+..+....+......
T Consensus       161 g~~~~~~~----~~~~~~~~gT~~Y~APE~~~~---~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  233 (305)
T d1blxa_         161 GLARIYSF----QMALTSVVVTLWYRAPEVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  233 (305)
T ss_dssp             CSCCCCCG----GGGGCCCCCCCTTCCHHHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             hhhhhhcc----cccCCCcccChhhcCcchhcC---CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCC
Confidence            99875432    123345689999999999974   47899999999999999999999999999887776665432111


Q ss_pred             -------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCC
Q 006772          274 -------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE  321 (632)
Q Consensus       274 -------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~  321 (632)
                                               ..++..+++++.+||.+||++||++|||+.|+++      ++|+.+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~------Hpff~~i~  300 (305)
T d1blxa_         234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS------HPYFQDLE  300 (305)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGTTCC
T ss_pred             CchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc------ChhhcCch
Confidence                                     1134568899999999999999999999999876      67776554

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-46  Score=389.83  Aligned_cols=258  Identities=22%  Similarity=0.300  Sum_probs=208.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|+++++||+|+||+||+|.++.++      +.||||+++.....  ....+.+ +..+++++ +||||+.+++++.++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~-Ei~il~~l-~Hp~Iv~~~~~~~~~   73 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTG------EVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKLLDVIHTE   73 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEC-------CCHHHHH-HHHHHTTC-CCTTBCCEEEEEEET
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCC------CEEEEEEEehhhcChHHHHHHHH-HHHHHHhC-CCCcEEEeccccccc
Confidence            68999999999999999999998766      48999999653321  1233333 34555554 799999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +.+||||||+.|++.+++.......+++..++.++.||+.||+|||+++||||||||+|||++.++.+||+|||+|+...
T Consensus        74 ~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_          74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  153 (298)
T ss_dssp             TEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             cceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceecc
Confidence            99999999999988888877667789999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP------  274 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p------  274 (632)
                      ..   ........||+.|+|||.+...  ..++.++|+|||||++|+|++|+.||.+.+..+....+......+      
T Consensus       154 ~~---~~~~~~~~gt~~y~apE~~~~~--~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  228 (298)
T d1gz8a_         154 VP---VRTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP  228 (298)
T ss_dssp             CC---SBCTTCCBCCCTTCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             CC---cccceeecccceeeehhhhccc--cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcc
Confidence            32   2233445799999999988643  245789999999999999999999999988776655544211111      


Q ss_pred             ----------CC-----------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCC
Q 006772          275 ----------CI-----------PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND  319 (632)
Q Consensus       275 ----------~~-----------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~  319 (632)
                                .+           ...+++++.+||.+||+.||++|||+.|+++      ++|+.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~------H~ff~~  288 (298)
T d1gz8a_         229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA------HPFFQD  288 (298)
T ss_dssp             TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT------SGGGTT
T ss_pred             ccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC------CHhhcc
Confidence                      01           1256789999999999999999999999886      566643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-47  Score=400.40  Aligned_cols=287  Identities=18%  Similarity=0.304  Sum_probs=228.7

Q ss_pred             CCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCc---hhhHHHHHHHHHHHhhhccCCCceeEe
Q 006772           37 RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK---EDCAKVFVNKFEELFPKFRESQSVCWL  113 (632)
Q Consensus        37 ~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~il~~l~~h~~I~~l  113 (632)
                      ...+..++|++++.||+|+||+||+|.+....   .+++.||||++++..   .....+...++..++.++.+||||+.+
T Consensus        18 ~~~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~   94 (322)
T d1vzoa_          18 AEKVGIENFELLKVLGTGAYGKVFLVRKISGH---DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL   94 (322)
T ss_dssp             CCCCCGGGEEEEEEEEETTTEEEEEEEECSST---TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             CcccchhceEEEEEEecCCCeEEEEEEECccC---CCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEe
Confidence            33456789999999999999999999986533   234689999986532   111122233444667788888999999


Q ss_pred             eEEEEECCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEe
Q 006772          114 HGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGD  192 (632)
Q Consensus       114 ~~~~~~~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~D  192 (632)
                      ++++.+...++++|||+. |+|.+.+...  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus        95 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~D  172 (322)
T d1vzoa_          95 HYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTD  172 (322)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESC
T ss_pred             eeeeccCCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEee
Confidence            999999999999999998 5777777554  4788999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--h
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI--K  270 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~--~  270 (632)
                      ||+++.+....  ........||+.|+|||.+.+. ...++.++|||||||+||||++|+.||.+.+..+....+..  .
T Consensus       173 FG~a~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~-~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~  249 (322)
T d1vzoa_         173 FGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL  249 (322)
T ss_dssp             SSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred             ccchhhhcccc--cccccccccccccchhHHhhcC-CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc
Confidence            99998753321  2223456799999999999754 33578899999999999999999999987653332222221  2


Q ss_pred             ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHHHHHhhhhcccCCCCccccccccccCCCcCC
Q 006772          271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPL-----MADILHAFESSQNAVYNDGEWTGLGSRALTDTSSVK  337 (632)
Q Consensus       271 ~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs-----~~ell~~Le~~~~~~~~~~~w~~~~~~~~~~~~~~~  337 (632)
                      ...+.+|..+++++.+||.+||++||.+||+     ++|+++      ++|+.+.+|..+..+.+.+|+.|.
T Consensus       250 ~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~------Hpff~~i~~~~l~~~~~~~p~~p~  315 (322)
T d1vzoa_         250 KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE------HLFFQKINWDDLAAKKVPAPFKPV  315 (322)
T ss_dssp             HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             cCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc------CHhhcCCCHHHHHhCCCCcCCCCC
Confidence            3456678899999999999999999999995     677764      889999999999999988887663

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-47  Score=394.56  Aligned_cols=272  Identities=18%  Similarity=0.308  Sum_probs=222.5

Q ss_pred             CCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEE
Q 006772           38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGIS  117 (632)
Q Consensus        38 ~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~  117 (632)
                      ..|++++|++.++||+|+||+||+|.++..... .....||||++++.........+.++..++.++ +||||+.+++++
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~-~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~   92 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKD-EPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVV   92 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETT-EEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEE
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccC-CCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-CCCCEeeeeeEE
Confidence            348899999999999999999999998643221 223589999997654443333344444556665 689999999999


Q ss_pred             EECCEEEEEEecCC-CCHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcE
Q 006772          118 VINGKICIAMKFYE-GSVGDRIAQQR--------GGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQL  188 (632)
Q Consensus       118 ~~~~~l~LVmEy~~-GsL~d~l~~~~--------~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~v  188 (632)
                      ..++..++||||++ |+|.+++....        ...+++..+..++.|++.||.|||+++|+||||||+|||++.++++
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~  172 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  172 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceE
Confidence            99999999999998 78888776432        1357889999999999999999999999999999999999999999


Q ss_pred             EEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC-CCCCCCCCHHHHHHHH
Q 006772          189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG-IQPWFGKSVEEIYHSV  267 (632)
Q Consensus       189 kL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG-~~PF~~~~~~ei~~~i  267 (632)
                      ||+|||+|+....... ........||+.|||||.+.+   +.++.++|||||||++|||+|| .+||.+.+..+++..+
T Consensus       173 Kl~DFGla~~~~~~~~-~~~~~~~~~t~~y~aPe~l~~---~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i  248 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV  248 (308)
T ss_dssp             EECCTTCCCGGGGGGC-EEGGGSSEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred             EEeecccceeccCCcc-eeeccceecccccCCHHHHcc---CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            9999999986543221 112233468999999999974   4688999999999999999997 5889898988888776


Q ss_pred             HhhccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcc
Q 006772          268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV  316 (632)
Q Consensus       268 ~~~~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~  316 (632)
                      .. ...+..|..+|+++.++|.+||+.||++|||+.+|++.|++...+.
T Consensus       249 ~~-~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~  296 (308)
T d1p4oa_         249 ME-GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  296 (308)
T ss_dssp             HT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             Hh-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            64 4566778999999999999999999999999999999998765443

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-47  Score=398.24  Aligned_cols=247  Identities=21%  Similarity=0.296  Sum_probs=197.2

Q ss_pred             CCCeEEEe-EEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           42 PTSLKLKH-RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        42 ~~~y~l~~-~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      .++|++.. .||+|+||.||+|.+..++      +.||||+++...     .. .++..++.++.+||||+.+++++.+ 
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~-----~~-~~E~~~~~~~~~hpnIv~l~~~~~~~   77 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQ------EKFALKMLQDCP-----KA-RREVELHWRASQCPHIVRIVDVYENL   77 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEECSH-----HH-HHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCC------CEEEEEEECCcH-----HH-HHHHHHHHHhcCCCCCCeEEEEEeec
Confidence            36899875 5999999999999998766      489999996532     22 2333445566789999999999875 


Q ss_pred             ---CCEEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEe
Q 006772          120 ---NGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGD  192 (632)
Q Consensus       120 ---~~~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~D  192 (632)
                         +..+|||||||+ |+|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.   ++.+||+|
T Consensus        78 ~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~D  157 (335)
T d2ozaa1          78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  157 (335)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred             ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccc
Confidence               467999999998 58998887654567999999999999999999999999999999999999985   56799999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh--
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK--  270 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~--  270 (632)
                      ||+|+.....    ......+||+.|||||++.+.   .|+.++|||||||+||||+||+.||.+.+..+....+...  
T Consensus       158 FG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~---~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~  230 (335)
T d2ozaa1         158 FGFAKETTSH----NSLTTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  230 (335)
T ss_dssp             CTTCEECCCC----CCCCCCSCCCSSCCCCCCCGG---GGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC
T ss_pred             cceeeeccCC----CccccccCCcccCCcHHHcCC---CCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh
Confidence            9999875432    223456899999999999754   6889999999999999999999999887644433333211  


Q ss_pred             ccCCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          271 KEKPCIP----SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       271 ~~~p~~p----~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      .....+|    ..+|+++.+||.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         231 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             SCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1222333    358999999999999999999999999986

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-46  Score=392.58  Aligned_cols=248  Identities=19%  Similarity=0.309  Sum_probs=207.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++++.||+|+||+||+|.++.++      +.||||+++....+  .....++..++..+ +||||+.+++++.+++.
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~------~~~AiK~i~~~~~~--~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~   75 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSK------KTYMAKFVKVKGTD--QVLVKKEISILNIA-RHRNILHLHESFESMEE   75 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCCTHH--HHHHHHHHHHHHHS-CCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEcCCccc--HHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence            68999999999999999999998766      48999999765433  22333444555555 69999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecC--CcEEEEecCCceec
Q 006772          123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEH--DQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~--g~vkL~DFGlak~~  199 (632)
                      +|||||||+ |+|.+++.. .+..+++.+++.|+.||+.||+|||+++|+||||||+|||++.+  +.+||+|||+++..
T Consensus        76 ~~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcc
Confidence            999999999 478877754 33579999999999999999999999999999999999999854  48999999999865


Q ss_pred             cCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC--CC
Q 006772          200 LGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC--IP  277 (632)
Q Consensus       200 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~--~p  277 (632)
                      ...    .......||+.|+|||.+.+.   .++.++|||||||++|||++|..||.+.+..+++..+........  .+
T Consensus       155 ~~~----~~~~~~~~t~~y~ape~~~~~---~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  227 (321)
T d1tkia_         155 KPG----DNFRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF  227 (321)
T ss_dssp             CTT----CEEEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH
T ss_pred             ccC----CcccccccccccccchhccCC---CCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhc
Confidence            321    223445789999999998743   688999999999999999999999999999888888774432221  11


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          278 SGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       278 ~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ..+|+++.+||.+||+.||.+|||+.|+++
T Consensus       228 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         228 KEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            478999999999999999999999999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-46  Score=387.31  Aligned_cols=253  Identities=22%  Similarity=0.264  Sum_probs=199.1

Q ss_pred             EEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHH----HHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK----VFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        47 l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~----~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      .++.||+|+||+||+|+++.++      +.||||+++........    ....++..++..+ +||||+.+++++..++.
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~   74 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTN------QIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSN   74 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCC------SEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTC
T ss_pred             cceEeccCcCeEEEEEEECCCC------cEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCc
Confidence            4678999999999999988765      48999998654322111    1122333455555 79999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCC
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGR  202 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~  202 (632)
                      +||||||+.|++...+.. .+..+++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        75 ~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_          75 ISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  153 (299)
T ss_dssp             CEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             eeehhhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCC
Confidence            999999999877766643 3468999999999999999999999999999999999999999999999999999765332


Q ss_pred             CCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCCC-------
Q 006772          203 SLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-------  275 (632)
Q Consensus       203 ~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p~-------  275 (632)
                         .......+||+.|||||++...  ..|+.++|||||||++|||++|..||.+.+..+....+......+.       
T Consensus       154 ---~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~  228 (299)
T d1ua2a_         154 ---NRAYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM  228 (299)
T ss_dssp             ---CCCCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred             ---cccccceecChhhccHHHHccC--CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccch
Confidence               1223345799999999998632  3578999999999999999999999999888777666553211110       


Q ss_pred             --------------C-----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccC
Q 006772          276 --------------I-----PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN  318 (632)
Q Consensus       276 --------------~-----p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~  318 (632)
                                    .     ...+++++.+||.+||+.||++|||++|+++      ++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~------Hp~f~  284 (299)
T d1ua2a_         229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK------MKYFS  284 (299)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT------SGGGT
T ss_pred             hccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC------CHhhC
Confidence                          0     1356889999999999999999999999876      66664

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-46  Score=387.98  Aligned_cols=263  Identities=19%  Similarity=0.310  Sum_probs=206.1

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-CCEEE
Q 006772           46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-NGKIC  124 (632)
Q Consensus        46 ~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-~~~l~  124 (632)
                      .+.++||+|+||+||+|++..++.   ....||||.+++.........+.++..++.++ +||||+.+++++.. ++..+
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~  105 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPL  105 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC-------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCC---EEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceE
Confidence            447899999999999999876542   22369999997644433333334444566666 69999999999876 57899


Q ss_pred             EEEecCCC-CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccCCC
Q 006772          125 IAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLGRS  203 (632)
Q Consensus       125 LVmEy~~G-sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~~~  203 (632)
                      +|||||+| ++.+++ ......+++..++.++.|++.||.|||+++|+||||||+|||+++++.+||+|||+++......
T Consensus       106 lv~E~~~~g~l~~~~-~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         106 VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             EEEECCTTCBHHHHH-HCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             EEEEEeecCchhhhh-ccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            99999995 555554 4445678899999999999999999999999999999999999999999999999998764432


Q ss_pred             CCC-CccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhccCCCCCCCCC
Q 006772          204 LSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK-SVEEIYHSVVIKKEKPCIPSGLP  281 (632)
Q Consensus       204 ~~~-~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~-~~~ei~~~i~~~~~~p~~p~~lp  281 (632)
                      ... .......||+.|+|||.+..   +.++.++||||||+++|||++|..||... +..++...+. .+.++..|..++
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~-~g~~~~~p~~~~  260 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCP  260 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHH-TTCCCCCCTTCC
T ss_pred             cccceecccccccccccChHHHhc---CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCcccCc
Confidence            222 22234578999999999873   47899999999999999999977776654 3444444444 456777889999


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhccc
Q 006772          282 PAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVY  317 (632)
Q Consensus       282 ~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~  317 (632)
                      +++.+||.+||+.||++||++.||++.|+.+...+.
T Consensus       261 ~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~  296 (311)
T d1r0pa_         261 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  296 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999876543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-47  Score=386.72  Aligned_cols=241  Identities=19%  Similarity=0.232  Sum_probs=196.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh------hHHHHHHHHHHHhhhcc-CCCceeEeeE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED------CAKVFVNKFEELFPKFR-ESQSVCWLHG  115 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~il~~l~-~h~~I~~l~~  115 (632)
                      ++|++.+.||+|+||.||+|+++.++      +.||||++.+....      ....+. .+..++.++. .||||+.+++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~~~-~E~~il~~l~~~h~nIv~~~~   76 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDN------LPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSGVIRLLD   76 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCCEEECTTCCEEE-HHHHHHHHHCSSSCSBCCEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCC------CEEEEEEEehHHccchhhhhHHHHHH-HHHHHHHHhccCCCCccEEEE
Confidence            57999999999999999999998765      48999998643211      011112 2334455554 5899999999


Q ss_pred             EEEECCEEEEEEecCCC--CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-CCcEEEEe
Q 006772          116 ISVINGKICIAMKFYEG--SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-HDQLVLGD  192 (632)
Q Consensus       116 ~~~~~~~l~LVmEy~~G--sL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-~g~vkL~D  192 (632)
                      ++.+++..|+||||+.|  ++.+++...  +.+++.+++.++.||+.||+|||+++|+||||||+|||++. ++.+||+|
T Consensus        77 ~~~~~~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          77 WFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             EEeeCCeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECc
Confidence            99999999999999974  566666543  58999999999999999999999999999999999999995 47999999


Q ss_pred             cCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcc
Q 006772          193 FGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE  272 (632)
Q Consensus       193 FGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~  272 (632)
                      ||+|+....     .......||+.|||||++.+.  ..++.++|||||||++|||++|+.||.+.+      .+.  ..
T Consensus       155 FG~a~~~~~-----~~~~~~~GT~~y~aPE~~~~~--~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~--~~  219 (273)
T d1xwsa_         155 FGSGALLKD-----TVYTDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EII--RG  219 (273)
T ss_dssp             CTTCEECCS-----SCBCCCCSCGGGSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHH--HC
T ss_pred             cccceeccc-----ccccccccCCCcCCHHHHcCC--CCCCcccccccceeeehhHhhCCCCCCCch------HHh--hc
Confidence            999986532     223456899999999998743  124678999999999999999999997632      122  23


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       273 ~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      ...++..+|+++.+||.+||+.||++|||++|+++
T Consensus       220 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         220 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            45678899999999999999999999999999876

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-45  Score=381.58  Aligned_cols=258  Identities=18%  Similarity=0.245  Sum_probs=204.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      ++|++.+.||+|+||.||+|++..++      +.||||++......  .+ +..+.+++..+.+|++|+.+..++..++.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~~~--~~-~~~E~~i~~~l~~~~~i~~~~~~~~~~~~   77 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKH--PQ-LHIESKIYKMMQGGVGIPTIRWCGAEGDY   77 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEESCTTS--CC-HHHHHHHHHHSTTSTTCCCEEEEEEETTE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCC------CEEEEEEEchhccC--HH-HHHHHHHHHHccCCCcccEEEEEEecCCE
Confidence            57999999999999999999988765      48999998754332  12 23445667778888889998898899999


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec---CCcEEEEecCCceec
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE---HDQLVLGDFGIPYLL  199 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~---~g~vkL~DFGlak~~  199 (632)
                      .++||||+.|++.+.+.. ..+.+++..++.++.|++.||+|||+++|+||||||+|||++.   +..+||+|||+|+.+
T Consensus        78 ~~ivme~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_          78 NVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             EEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             EEEEEEEcCCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence            999999999988877654 3468999999999999999999999999999999999999864   457999999999876


Q ss_pred             cCCCCC----CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHH---hhc-
Q 006772          200 LGRSLS----DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV---IKK-  271 (632)
Q Consensus       200 ~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~---~~~-  271 (632)
                      ......    ........||+.|||||++.+.   +++.++|||||||++|||++|..||.+.........+.   ... 
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~  233 (299)
T d1ckia_         157 RDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  233 (299)
T ss_dssp             BCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTB---CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHH
T ss_pred             cccccccceeccccCCcCCCccccCHHHHhCC---CCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccC
Confidence            432211    1223456899999999999754   68999999999999999999999998865443322211   111 


Q ss_pred             --cCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhh
Q 006772          272 --EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ  313 (632)
Q Consensus       272 --~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~  313 (632)
                        ..+..+..+|+++.++|.+||+.||++||++.++.+.|+.+.
T Consensus       234 ~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence              112234689999999999999999999999999888777653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=9.8e-45  Score=375.18  Aligned_cols=260  Identities=17%  Similarity=0.229  Sum_probs=209.2

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      .++|++++.||+|+||+||+|++..++      +.||||++......  ..+ .++.+++..+.+++|++.+++++..++
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~~~--~~~-~~e~~~~~~l~~~~~i~~~~~~~~~~~   74 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNN------QQVAIKFEPRRSDA--PQL-RDEYRTYKLLAGCTGIPNVYYFGQEGL   74 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTT------EEEEEEEEECCTTS--CCH-HHHHHHHHHTTTCTTCCCEEEEEEETT
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEccccCc--HHH-HHHHHHHHHhcCCCCCCEEEEEeecCC
Confidence            468999999999999999999998765      48999998654322  122 233355667778899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEec-----CCcEEEEecCCc
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSE-----HDQLVLGDFGIP  196 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~-----~g~vkL~DFGla  196 (632)
                      ..|+||||+.|+|.+.+.. .+..+++.+++.++.|++.||+|||++||+||||||+|||++.     ++.+||+|||+|
T Consensus        75 ~~~~vme~~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          75 HNVLVIDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             EEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ccEEEEEecCCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEccccee
Confidence            9999999999999888754 3468999999999999999999999999999999999999974     578999999999


Q ss_pred             eeccCCCC----CCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCC---HHHHHHHHHh
Q 006772          197 YLLLGRSL----SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS---VEEIYHSVVI  269 (632)
Q Consensus       197 k~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~---~~ei~~~i~~  269 (632)
                      +.......    ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+   ..+.+..+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~---~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~  230 (293)
T d1csna_         154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE  230 (293)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH
T ss_pred             EEcccCccccceeecccCceEEchhhcCHHHhcCC---CCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHh
Confidence            87643211    11223456899999999999743   68999999999999999999999998653   3333333332


Q ss_pred             hccCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          270 KKEKP---CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       270 ~~~~p---~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                      ....+   ..+..+|+++.+++..|+..+|++||+++.+.+.|+++..
T Consensus       231 ~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         231 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            22221   2346789999999999999999999999998887777643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.1e-45  Score=375.65  Aligned_cols=250  Identities=20%  Similarity=0.281  Sum_probs=201.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh--hHHHHHHHHHHHhhhccCCCceeEeeEEEEEC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED--CAKVFVNKFEELFPKFRESQSVCWLHGISVIN  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~  120 (632)
                      ++|++.++||+|+||+||+|+++. +      +.||||++......  ....+. ++..+++++ +||||+.+++++..+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~-~------~~vAvK~i~~~~~~~~~~~~~~-~E~~il~~l-~hpnIv~~~~~~~~~   72 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNY-G------ETFALKKIRLEKEDEGIPSTTI-REISILKEL-KHSNIVKLYDVIHTK   72 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETT-S------CEEEEEEECCSSGGGCCCHHHH-HHHHGGGGC-CCTTBCCEEEEEECS
T ss_pred             CCceeccEEecCCCcEEEEEEeCC-C------CEEEEEEEehhhcChHHHHHHH-HHHHHHHhC-CCCcEEeeeeecccC
Confidence            689999999999999999999853 2      48999999764322  123333 344556665 699999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceecc
Q 006772          121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLL  200 (632)
Q Consensus       121 ~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~  200 (632)
                      +..+++|||+.|+++..+... .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|....
T Consensus        73 ~~~~i~~e~~~~~~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~  151 (286)
T d1ob3a_          73 KRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (286)
T ss_dssp             SCEEEEEECCSEEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             CceeEEEEeehhhhHHHHHhh-cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecc
Confidence            999999999999888777653 4689999999999999999999999999999999999999999999999999997653


Q ss_pred             CCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC-------
Q 006772          201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK-------  273 (632)
Q Consensus       201 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~-------  273 (632)
                      ...   .......||+.|+|||.+.+.  ..++.++|+|||||++|||++|+.||.+.+..+...++......       
T Consensus       152 ~~~---~~~~~~~~~~~y~~pE~~~~~--~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (286)
T d1ob3a_         152 IPV---RKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (286)
T ss_dssp             C------------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cCc---cccceecccchhhhHHHHhCC--CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhcc
Confidence            321   122344689999999998743  35789999999999999999999999998877666554421111       


Q ss_pred             --------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          274 --------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       274 --------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                          ..++..+++++.+||.+||+.||++|||+.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                1123567899999999999999999999999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=383.84  Aligned_cols=264  Identities=23%  Similarity=0.272  Sum_probs=207.6

Q ss_pred             ccccccCCCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc
Q 006772           26 LRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR  105 (632)
Q Consensus        26 ~~~~~~~~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~  105 (632)
                      ..++.++|.........-+|+..+.||+|+||+||+|+++.++      +.||||++.+.....     .++..++.++ 
T Consensus         3 ~~~~~~~~~~~p~~~~~~~Y~~~k~LG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~-----~~Ei~il~~l-   70 (350)
T d1q5ka_           3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG------ELVAIKKVLQDKRFK-----NRELQIMRKL-   70 (350)
T ss_dssp             CEEEEEEESSSSCCCEEEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSSSC-----CHHHHHHHHC-
T ss_pred             CcccccCCCCCCCCcccCCcEeeeEEeeCcCeEEEEEEECCCC------CEEEEEEECccchHH-----HHHHHHHHhc-
Confidence            3455666655444444457999999999999999999998766      489999997654322     2233455555 


Q ss_pred             CCCceeEeeEEEEEC------CEEEEEEecCCCCHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeC
Q 006772          106 ESQSVCWLHGISVIN------GKICIAMKFYEGSVGDRIAQQ--RGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKP  177 (632)
Q Consensus       106 ~h~~I~~l~~~~~~~------~~l~LVmEy~~GsL~d~l~~~--~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP  177 (632)
                      +|+||+.+++++...      .++||||||++|++.+.+...  ....+++.+++.++.||+.||+|||++||+||||||
T Consensus        71 ~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp  150 (350)
T d1q5ka_          71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP  150 (350)
T ss_dssp             CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred             CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCc
Confidence            799999999988643      358999999998877666542  346799999999999999999999999999999999


Q ss_pred             CeEEEecCC-cEEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCC
Q 006772          178 SNLLLSEHD-QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF  256 (632)
Q Consensus       178 ~NILld~~g-~vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~  256 (632)
                      +|||++.++ .+||+|||+++.....    ......+||+.|+|||.+.+.  ..++.++|||||||++|||++|+.||.
T Consensus       151 ~NILl~~~~~~~kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DIwSlG~il~el~~g~~pf~  224 (350)
T d1q5ka_         151 QNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFP  224 (350)
T ss_dssp             GGEEECTTTCCEEECCCTTCEECCTT----SCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             ceEEEecCCCceeEecccchhhccCC----cccccccccccccChHHhhcc--cCCCcceeecccceEEEehhhCCCCCC
Confidence            999999775 8999999999876432    223446799999999988643  358899999999999999999999999


Q ss_pred             CCCHHHHHHHHHhhcc---------------CC------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          257 GKSVEEIYHSVVIKKE---------------KP------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       257 ~~~~~ei~~~i~~~~~---------------~p------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                      +.+..+.+..+.....               ..            .....+++++.+||.+||+.||++|||+.|+++
T Consensus       225 ~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         225 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            8887665555432100               00            112457899999999999999999999999886

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=375.78  Aligned_cols=258  Identities=20%  Similarity=0.305  Sum_probs=198.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC-
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVING-  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~-  121 (632)
                      ++|.+.++||+|+||.||+|++..        +.||||++....   ...+..+.+.......+||||+.+++++..++ 
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g--------~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~   71 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRG--------EEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG   71 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETT--------EEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECC--------EEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCC
Confidence            579999999999999999998632        489999986432   23333333233333457999999999998654 


Q ss_pred             ---EEEEEEecCC-CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh--------CCceeeeeeCCeEEEecCCcEE
Q 006772          122 ---KICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS--------IGLLVLNLKPSNLLLSEHDQLV  189 (632)
Q Consensus       122 ---~l~LVmEy~~-GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs--------~~IvHRDLKP~NILld~~g~vk  189 (632)
                         .+||||||++ |+|.+++.+   ..+++..++.++.|++.||+|||+        ++|+||||||+||||+.++.+|
T Consensus        72 ~~~~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K  148 (303)
T d1vjya_          72 TWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  148 (303)
T ss_dssp             SSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred             cceEEEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeE
Confidence               6899999998 688888754   369999999999999999999996        5999999999999999999999


Q ss_pred             EEecCCceeccCCCCC-CCccccccCCCccCCccccCCCCC---CCCCcccccchhHHHHHHHHhCCCCCCC--------
Q 006772          190 LGDFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVR---GPISFETDTWGFGCSIMEMLTGIQPWFG--------  257 (632)
Q Consensus       190 L~DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~---g~~t~ksDvwSlGvvL~EmltG~~PF~~--------  257 (632)
                      |+|||+++........ ........||+.|||||++.+...   ..++.++|||||||+||||+||..||..        
T Consensus       149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~  228 (303)
T d1vjya_         149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  228 (303)
T ss_dssp             ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred             EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence            9999999876443211 223345689999999999875421   1357889999999999999999887642        


Q ss_pred             -------CCHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhh
Q 006772          258 -------KSVEEIYHSVVIKKEKPCIPSGL-----PPAVENVIIGCFEYDLRNRPLMADILHAFESSQN  314 (632)
Q Consensus       258 -------~~~~ei~~~i~~~~~~p~~p~~l-----p~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~  314 (632)
                             .+...+...+.....+|.+|...     +..+.+|+.+||+.||++|||+.||++.|+++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence                   12334444444444555555432     3469999999999999999999999999987763

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-44  Score=378.95  Aligned_cols=253  Identities=19%  Similarity=0.246  Sum_probs=199.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEEC--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN--  120 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~--  120 (632)
                      ++|++++.||+|+||+||+|.++.++      +.||||++.+...........++..++..+ +||||+.+++++..+  
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~   80 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNK------VRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTI   80 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTC------SEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSST
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCC------cEEEEEEEehhcChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccc
Confidence            56999999999999999999988766      489999997654333333333444556665 789999999998654  


Q ss_pred             ---CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          121 ---GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       121 ---~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                         ...||+|+++.|+|.+++..   +.+++.+++.++.||+.||+|||+++||||||||+|||++.++.+||+|||+|+
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~  157 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  157 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cccceEEEEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCcee
Confidence               34778877777899988854   379999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccCC---
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP---  274 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~p---  274 (632)
                      ...............+||+.|+|||++...  ..++.++|+||+||++|||++|+.||.+.+..+...........+   
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (345)
T d1pmea_         158 VADPDHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE  235 (345)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCGGGTTTB--CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             eccCCCccceeeccccccceechHHHhhcC--CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence            764433333334556899999999998643  357889999999999999999999999887655444332111110   


Q ss_pred             --------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 006772          275 --------------------------CIPSGLPPAVENVIIGCFEYDLRNRPLMADILH  307 (632)
Q Consensus       275 --------------------------~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~  307 (632)
                                                .....+++++.+||.+||+.||.+|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                      012467889999999999999999999999886

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=6.1e-44  Score=373.90  Aligned_cols=257  Identities=17%  Similarity=0.299  Sum_probs=201.8

Q ss_pred             CCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEE-
Q 006772           41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVI-  119 (632)
Q Consensus        41 ~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~-  119 (632)
                      +.++|+++++||+|+||+||+|+++.++      +.||||++++...   +.+ .++..++..+.+||||+.+++++.. 
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~---~~~-~~Ei~il~~l~~hpnIv~~~~~~~~~  102 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNN------EKVVVKILKPVKK---KKI-KREIKILENLRGGPNIITLADIVKDP  102 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSSCH---HHH-HHHHHHHHHHTTSTTBCCEEEEEECT
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCC------CEEEEEEECHHHH---HHH-HHHHHHHHhccCCCCCcEEEEEEEec
Confidence            3478999999999999999999998766      4899999976442   333 3344567777789999999999874 


Q ss_pred             -CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCC-cEEEEecCCce
Q 006772          120 -NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHD-QLVLGDFGIPY  197 (632)
Q Consensus       120 -~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g-~vkL~DFGlak  197 (632)
                       ...+++||||+.++.+..+    .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+
T Consensus       103 ~~~~~~~v~e~~~~~~L~~~----~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~  178 (328)
T d3bqca1         103 VSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  178 (328)
T ss_dssp             TTCSEEEEEECCCSCBGGGT----TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred             CCCceeEEEeecCCCcHHHH----hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccce
Confidence             4569999999996443222    24799999999999999999999999999999999999999655 68999999998


Q ss_pred             eccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhh------
Q 006772          198 LLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSV-EEIYHSVVIK------  270 (632)
Q Consensus       198 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~-~ei~~~i~~~------  270 (632)
                      .....    ......+||+.|+|||.+.+.  ..++.++|+||+||++|||++|..||..... .+....+...      
T Consensus       179 ~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~  252 (328)
T d3bqca1         179 FYHPG----QEYNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL  252 (328)
T ss_dssp             ECCTT----CCCCSCCSCGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred             eccCC----CcccccccCccccCcccccCC--CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchh
Confidence            75432    223456789999999998753  3478999999999999999999999976542 2221111100      


Q ss_pred             -----------------------------ccCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCCC
Q 006772          271 -----------------------------KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE  321 (632)
Q Consensus       271 -----------------------------~~~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~~  321 (632)
                                                   .........+++++.+||++||+.||++|||++|+|+      +++|.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~------Hp~F~~v~  326 (328)
T d3bqca1         253 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME------HPYFYTVV  326 (328)
T ss_dssp             HHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTTSC
T ss_pred             hhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc------CcccCCCC
Confidence                                         0000111347899999999999999999999999876      88888887


Q ss_pred             cc
Q 006772          322 WT  323 (632)
Q Consensus       322 w~  323 (632)
                      |+
T Consensus       327 ~~  328 (328)
T d3bqca1         327 KD  328 (328)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-44  Score=375.37  Aligned_cols=254  Identities=22%  Similarity=0.283  Sum_probs=197.7

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|++++.||+|+||+||+|.++.++      +.||||++++...  ...+.+. ++..++..+ +||||+.+++++..
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~-~Ei~il~~l-~hpniv~l~~~~~~   88 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTG------AKVAIKKLYRPFQSELFAKRAY-RELRLLKHM-RHENVIGLLDVFTP   88 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTC------CEEEEEECSSTTSSHHHHHHHH-HHHHHHHHC-CBTTBCCCSEEECS
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEchhhcChHHHHHHH-HHHHHHHhc-CCCCeeEEEEEecc
Confidence            478999999999999999999998766      4899999975322  2222333 334555555 79999999999876


Q ss_pred             CC------EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 NG------KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~~------~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .+      .+||||||+.+++.+.+..   +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        89 ~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Df  165 (346)
T d1cm8a_          89 DETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF  165 (346)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             CccccccceEEEEEecccccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccc
Confidence            54      5799999997666665533   47999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |+|+....      ......||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+..+....+......
T Consensus       166 g~a~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~  237 (346)
T d1cm8a_         166 GLARQADS------EMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT  237 (346)
T ss_dssp             TTCEECCS------SCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             cceeccCC------ccccccccccccCHHHHcCC--CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCC
Confidence            99987532      23456799999999998643  35688999999999999999999999988766554433221111


Q ss_pred             -----------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          274 -----------------------------PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       274 -----------------------------p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                                                   ......+++++.+||.+||..||.+|||+.|+++      ++++...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~------Hp~f~~~  307 (346)
T d1cm8a_         238 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA------HPYFESL  307 (346)
T ss_dssp             CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGTTT
T ss_pred             CcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc------ChhhCcC
Confidence                                         1123567899999999999999999999999987      6666543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=369.13  Aligned_cols=260  Identities=22%  Similarity=0.273  Sum_probs=200.3

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      .++|+++++||+|+||+||+|+++.++      +.||||++.....  .....+.++ ..+++++ +|+|++.+++++..
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~E-~~il~~l-~h~nii~~~~~~~~   80 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTG------QKVALKKVLMENEKEGFPITALRE-IKILQLL-KHENVVNLIEICRT   80 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEC----CTTSSCHHHHHH-HHHHHHC-CCTTBCCEEEEEEC
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEehhhcchHHHHHHHHH-HHHHHHh-cCCCccceEeeeec
Confidence            479999999999999999999998765      4899999864322  222333333 4556666 68999999888754


Q ss_pred             --------CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEE
Q 006772          120 --------NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLG  191 (632)
Q Consensus       120 --------~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~  191 (632)
                              ++.+|++|||+.++++..+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus        81 ~~~~~~~~~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~  159 (318)
T d3blha1          81 KASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA  159 (318)
T ss_dssp             ----------CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             ccccccccCceEEEEEeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEee
Confidence                    356899999999877766543 34689999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeccCCCCC-CCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 006772          192 DFGIPYLLLGRSLS-DSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK  270 (632)
Q Consensus       192 DFGlak~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~  270 (632)
                      |||+++........ .......+||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+..+....+...
T Consensus       160 dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~--~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~  237 (318)
T d3blha1         160 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL  237 (318)
T ss_dssp             CCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ecceeeecccccccccccccceecCHHHhhHHHHcCC--CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh
Confidence            99999765432211 2223445799999999998743  35789999999999999999999999998877665554432


Q ss_pred             ccCCC--CCC----------------------------CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccC
Q 006772          271 KEKPC--IPS----------------------------GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN  318 (632)
Q Consensus       271 ~~~p~--~p~----------------------------~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~  318 (632)
                      ...+.  ...                            ..++++.+||.+||+.||++|||++|+++      ++||.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~------Hpff~  309 (318)
T d3blha1         238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN------HDFFW  309 (318)
T ss_dssp             HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGS
T ss_pred             cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc------Chhhc
Confidence            21111  000                            12667889999999999999999999887      66664

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-42  Score=357.17  Aligned_cols=257  Identities=19%  Similarity=0.284  Sum_probs=202.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch-hhHHHHHHHHHHHhhhccCCCceeEeeEEEEECC
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE-DCAKVFVNKFEELFPKFRESQSVCWLHGISVING  121 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~  121 (632)
                      ++|+++++||+|+||+||+|+++.++      +.||||+++.... ........++..+++.+ +|+||+.+++++...+
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~   74 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETH------EIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDK   74 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCC------cEEEEEEEehhhCChHHHHHHHHHHHHHHhc-CcCCEEeecccccccc
Confidence            68999999999999999999998766      4899999965432 22222333344555554 7899999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCCceeccC
Q 006772          122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGIPYLLLG  201 (632)
Q Consensus       122 ~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGlak~~~~  201 (632)
                      ..+++|+++.|.++..+.. ..+.+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        75 ~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_          75 KLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             EEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             ceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccC
Confidence            9999999999876666554 356899999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCC-CCCHHHHHHHHHhhcc--------
Q 006772          202 RSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKKE--------  272 (632)
Q Consensus       202 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~-~~~~~ei~~~i~~~~~--------  272 (632)
                      ..   .......+++.|+|||.+...  ..++.++|||||||++|||++|..||. +.+..+....+.....        
T Consensus       154 ~~---~~~~~~~~~~~~~~pe~~~~~--~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (292)
T d1unla_         154 PV---RCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP  228 (292)
T ss_dssp             CC---SCCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred             CC---ccceeeccccchhhhhHhccC--CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhh
Confidence            21   122334578899999998743  246889999999999999999999865 4455555444432111        


Q ss_pred             -------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccC
Q 006772          273 -------------------KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN  318 (632)
Q Consensus       273 -------------------~p~~p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~  318 (632)
                                         ....+..+++++.+||.+||+.||.+|||++|+++      +++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~------Hp~f~  287 (292)
T d1unla_         229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ------HPYFS  287 (292)
T ss_dssp             TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT------SGGGS
T ss_pred             hhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc------Chhhc
Confidence                               11233467889999999999999999999999876      56664

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-42  Score=366.26  Aligned_cols=252  Identities=20%  Similarity=0.219  Sum_probs=191.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-hHHHHHHHHHHHhhhccCCCceeEeeEEEEE--
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-CAKVFVNKFEELFPKFRESQSVCWLHGISVI--  119 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~--  119 (632)
                      ++|++++.||+|+||+||+|.++.++      +.||||++.+.... .......++..+++.+ +||||+.+++++..  
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~   89 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLD------RNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQK   89 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTT------EEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCC------CEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeccc
Confidence            67999999999999999999998766      48999999754322 2222233444555565 79999999999864  


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEecCC
Q 006772          120 ----NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDFGI  195 (632)
Q Consensus       120 ----~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DFGl  195 (632)
                          ...+|+||||+.|++++.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+
T Consensus        90 ~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~  165 (355)
T d2b1pa1          90 TLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_dssp             STTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             ccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhh
Confidence                36899999999998887663    4789999999999999999999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC--
Q 006772          196 PYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK--  273 (632)
Q Consensus       196 ak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~--  273 (632)
                      ++.....    ......+||+.|+|||++.+.   .++.++|+||+||++|||++|+.||.+.+.......+......  
T Consensus       166 ~~~~~~~----~~~~~~~~t~~y~aPE~l~~~---~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~  238 (355)
T d2b1pa1         166 ARTAGTS----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC  238 (355)
T ss_dssp             -------------------CCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             hhccccc----cccccccccccccChhhhcCC---CCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCC
Confidence            8754321    223445789999999999753   6889999999999999999999999988766655444321111  


Q ss_pred             ------------------CCC--------------C------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhc
Q 006772          274 ------------------PCI--------------P------SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA  315 (632)
Q Consensus       274 ------------------p~~--------------p------~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~  315 (632)
                                        +..              +      ...++++.+||++||+.||++|||++|+|+      ++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~------Hp  312 (355)
T d2b1pa1         239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ------HP  312 (355)
T ss_dssp             HHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT------ST
T ss_pred             HHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc------Cc
Confidence                              000              0      113567899999999999999999999986      56


Q ss_pred             ccC
Q 006772          316 VYN  318 (632)
Q Consensus       316 ~~~  318 (632)
                      ++.
T Consensus       313 w~~  315 (355)
T d2b1pa1         313 YIN  315 (355)
T ss_dssp             TTG
T ss_pred             ccC
Confidence            664

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-42  Score=361.75  Aligned_cols=252  Identities=22%  Similarity=0.269  Sum_probs=195.4

Q ss_pred             CCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCch--hhHHHHHHHHHHHhhhccCCCceeEeeEEEEE
Q 006772           42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKE--DCAKVFVNKFEELFPKFRESQSVCWLHGISVI  119 (632)
Q Consensus        42 ~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~  119 (632)
                      +++|+++++||+|+||+||+|+++.++      +.||||++.+...  ...+.+. ++..++..+ +|+|++.+++++..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~-~Ei~il~~l-~h~~iv~~~~~~~~   88 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTG------LRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLLDVFTP   88 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTT------EEEEEEECSCTTSSHHHHHHHH-HHHHHHHHC-CCTTBCCCSEEECS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCC------CEEEEEEECchhcChHHHHHHH-HHHHHHHhc-CCCCeeeEEEEEee
Confidence            478999999999999999999998766      4899999975432  2223333 344555665 69999999998864


Q ss_pred             C------CEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCcEEEEec
Q 006772          120 N------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQLVLGDF  193 (632)
Q Consensus       120 ~------~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~vkL~DF  193 (632)
                      .      +..+++|++..|+|.+++.   .+++++.+++.++.||+.||+|||++||+||||||+|||++.++.+|++||
T Consensus        89 ~~~~~~~~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~df  165 (348)
T d2gfsa1          89 ARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF  165 (348)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             ccccccCceEEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccccccccc
Confidence            2      3355555555578877763   347999999999999999999999999999999999999999999999999


Q ss_pred             CCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhCCCCCCCCCHHHHHHHHHhhccC
Q 006772          194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK  273 (632)
Q Consensus       194 Glak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG~~PF~~~~~~ei~~~i~~~~~~  273 (632)
                      |++....      .......||+.|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.+.......+......
T Consensus       166 g~a~~~~------~~~~~~~g~~~y~apE~~~~~--~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~  237 (348)
T d2gfsa1         166 GLARHTD------DEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT  237 (348)
T ss_dssp             ----CCT------GGGSSSCHHHHTSCHHHHTTC--SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             chhcccC------cccccccccccccCchhhcCC--ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9986542      223446789999999987643  34688999999999999999999999998877666555432211


Q ss_pred             C---------------------CC--------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccC
Q 006772          274 P---------------------CI--------PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYN  318 (632)
Q Consensus       274 p---------------------~~--------p~~lp~~l~~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~  318 (632)
                      +                     ..        ...+++++.+||.+||+.||++|||++|+++      ++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~------Hp~f~  305 (348)
T d2gfsa1         238 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA------HAYFA  305 (348)
T ss_dssp             CCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGT
T ss_pred             CChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc------CHhhC
Confidence            1                     11        1357899999999999999999999999886      56654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.2e-38  Score=333.30  Aligned_cols=265  Identities=18%  Similarity=0.265  Sum_probs=191.6

Q ss_pred             CCCCCCCcCCCCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhcc-------
Q 006772           33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFR-------  105 (632)
Q Consensus        33 ~~~~~~~I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~-------  105 (632)
                      |..++..+...+|+++++||+|+||+||+|+++.++      +.||||++++.... .....+ +..++..+.       
T Consensus         3 p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g------~~vAvKvi~~~~~~-~~~~~~-Ei~~l~~l~~~~~~~~   74 (362)
T d1q8ya_           3 PAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNN------THVAMKIVRGDKVY-TEAAED-EIKLLQRVNDADNTKE   74 (362)
T ss_dssp             CCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSCHHH-HHHHHH-HHHHHHHHHHTCCSHH
T ss_pred             CCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEeccccc-hHHHHH-HHHHHHHhcchhhhhh
Confidence            455565566667999999999999999999998766      48999999764322 122222 222333322       


Q ss_pred             ---CCCceeEeeEEEEE--CCEEEEEEecCC--CCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeeeeeC
Q 006772          106 ---ESQSVCWLHGISVI--NGKICIAMKFYE--GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-IGLLVLNLKP  177 (632)
Q Consensus       106 ---~h~~I~~l~~~~~~--~~~l~LVmEy~~--GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-~~IvHRDLKP  177 (632)
                         .|+||+.+++++..  ....+++|+++.  ++............+++..++.++.||+.||+|||+ +||+||||||
T Consensus        75 ~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp  154 (362)
T d1q8ya_          75 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP  154 (362)
T ss_dssp             HHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSG
T ss_pred             hhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCCh
Confidence               46889998887754  456677777765  344444444455789999999999999999999998 8999999999


Q ss_pred             CeEEEecCCc------EEEEecCCceeccCCCCCCCccccccCCCccCCccccCCCCCCCCCcccccchhHHHHHHHHhC
Q 006772          178 SNLLLSEHDQ------LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG  251 (632)
Q Consensus       178 ~NILld~~g~------vkL~DFGlak~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~g~~t~ksDvwSlGvvL~EmltG  251 (632)
                      +|||++.++.      ++++|||.|.....      .....+||+.|+|||++..   ..++.++|+||+||+++||++|
T Consensus       155 ~NIll~~~~~~~~~~~~kl~dfg~s~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~el~~g  225 (362)
T d1q8ya_         155 ENVLMEIVDSPENLIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLG---APWGCGADIWSTACLIFELITG  225 (362)
T ss_dssp             GGEEEEEEETTTTEEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHT---CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             hHeeeeccCcccccceeeEeeccccccccc------ccccccccccccChhhccc---cCCCccccccchHHHHHHHHHC
Confidence            9999987663      99999999876432      2244679999999999874   4688999999999999999999


Q ss_pred             CCCCCCCCHH------HHHHHHH-hhc---------------------------------------cCCCCCCCCCHHHH
Q 006772          252 IQPWFGKSVE------EIYHSVV-IKK---------------------------------------EKPCIPSGLPPAVE  285 (632)
Q Consensus       252 ~~PF~~~~~~------ei~~~i~-~~~---------------------------------------~~p~~p~~lp~~l~  285 (632)
                      +.||...+..      +...... ..+                                       ....++...++++.
T Consensus       226 ~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (362)
T d1q8ya_         226 DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS  305 (362)
T ss_dssp             SCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHH
T ss_pred             CCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHH
Confidence            9999754321      1111110 000                                       01111223457899


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHHhhhhcccCCC
Q 006772          286 NVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG  320 (632)
Q Consensus       286 ~LI~~cL~~DP~~RPs~~ell~~Le~~~~~~~~~~  320 (632)
                      +||.+||+.||.+|||++|+|+      +++|.+.
T Consensus       306 dll~~mL~~dP~~Rpta~e~L~------Hp~f~~~  334 (362)
T d1q8ya_         306 DFLSPMLQLDPRKRADAGGLVN------HPWLKDT  334 (362)
T ss_dssp             HHHGGGGCSSTTTCBCHHHHHT------CGGGTTC
T ss_pred             HHHHHHCCCChhHCcCHHHHhc------CcccCCC
Confidence            9999999999999999999875      6777533

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.84  E-value=1.1e-21  Score=188.52  Aligned_cols=134  Identities=13%  Similarity=0.056  Sum_probs=94.6

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchh-----------------hHHHHHHHHHHHhhhccCC
Q 006772           45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED-----------------CAKVFVNKFEELFPKFRES  107 (632)
Q Consensus        45 y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~-----------------~~~~~~~~~~~il~~l~~h  107 (632)
                      +.++++||+|+||+||+|.+.. +      +.||||+++.....                 ........+...+..+ .+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~-g------~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~   73 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEK-F------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QG   73 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETT-T------EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TT
T ss_pred             chhCCEeeeCcceEEEEEECCC-C------CEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cC
Confidence            4688999999999999998743 2      48999987542110                 0001111122233344 45


Q ss_pred             CceeEeeEEEEECCEEEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeeeCCeEEEecCCc
Q 006772          108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGLLVLNLKPSNLLLSEHDQ  187 (632)
Q Consensus       108 ~~I~~l~~~~~~~~~l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs~~IvHRDLKP~NILld~~g~  187 (632)
                      .+++..++.  ..  .+++|||+++...        ..++...+..++.|++.+|+|||++||+||||||+|||++++ .
T Consensus        74 ~~v~~~~~~--~~--~~lvme~~~~~~~--------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~  140 (191)
T d1zara2          74 LAVPKVYAW--EG--NAVLMELIDAKEL--------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-G  140 (191)
T ss_dssp             SSSCCEEEE--ET--TEEEEECCCCEEG--------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-E
T ss_pred             CCcceEEEe--cC--CEEEEEeeccccc--------cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-C
Confidence            666665543  22  2789999997432        135566678899999999999999999999999999999965 5


Q ss_pred             EEEEecCCceec
Q 006772          188 LVLGDFGIPYLL  199 (632)
Q Consensus       188 vkL~DFGlak~~  199 (632)
                      ++|+|||+|...
T Consensus       141 ~~liDFG~a~~~  152 (191)
T d1zara2         141 IWIIDFPQSVEV  152 (191)
T ss_dssp             EEECCCTTCEET
T ss_pred             EEEEECCCcccC
Confidence            899999998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.01  E-value=1.4e-05  Score=77.41  Aligned_cols=140  Identities=12%  Similarity=-0.005  Sum_probs=81.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCCCcccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEEECCE
Q 006772           43 TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK  122 (632)
Q Consensus        43 ~~y~l~~~IG~G~FG~VylA~~~~~~~~~~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~~~~~  122 (632)
                      +.|++.+..+.++.+.||+....  +      ..+.+|+...........+ ..+...+..+..+--++.+..+...++.
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~~--~------~~~vlk~~~~~~~~~~~~~-~~E~~~l~~l~~~vpvP~vl~~~~~~~~   84 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVGE--N------ENLYLKMTDSRYKGTTYDV-EREKDMMLWLEGKLPVPKVLHFERHDGW   84 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEECS--S------CEEEEEEECGGGTTSTTCH-HHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             hceEEEEcCCCCCCCcEEEEEeC--C------CeEEEEEcCCCcccchhhH-HHHHHHHHHHhccCCCCcEEEEEecCCc
Confidence            46777776555556799987522  1      3578888754322111111 2222333333333334566677778899


Q ss_pred             EEEEEecCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------
Q 006772          123 ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS-----------------------------------  167 (632)
Q Consensus       123 l~LVmEy~~GsL~d~l~~~~~~~l~~~~~~~ia~qIa~gL~yLHs-----------------------------------  167 (632)
                      .++||++++|........      +......++.+++..|..||+                                   
T Consensus        85 ~~lv~~~l~G~~~~~~~~------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T d1j7la_          85 SNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEEECCSSEEHHHHTT------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGG
T ss_pred             eEEEEEeccccccccccc------ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcc
Confidence            999999999843321110      011111223333333333332                                   


Q ss_pred             ------------------C------CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 ------------------I------GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ------------------~------~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                                        .      .++|+|+.|.|||+++++.+-|+||+.+.
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                              1      26899999999999987667799999764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.10  E-value=0.0012  Score=62.86  Aligned_cols=28  Identities=11%  Similarity=-0.089  Sum_probs=24.6

Q ss_pred             ceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          170 LLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       170 IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ++|+|+.|.|||++.++.+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            7999999999999987777899999654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.96  E-value=0.00095  Score=68.92  Aligned_cols=29  Identities=21%  Similarity=0.305  Sum_probs=25.0

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCcee
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPYL  198 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak~  198 (632)
                      .++|+|+.|.|||+++++ ++|+||..+..
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            589999999999998765 89999987654

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.39  E-value=0.014  Score=59.64  Aligned_cols=85  Identities=14%  Similarity=0.173  Sum_probs=49.7

Q ss_pred             cCCCCeEEEeEEcccCceEEEEEEEcCCCCCc-ccccEEEEEEecCCchhhHHHHHHHHHHHhhhccCCCceeEeeEEEE
Q 006772           40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDF-DEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV  118 (632)
Q Consensus        40 I~~~~y~l~~~IG~G~FG~VylA~~~~~~~~~-~~~~~VAIK~l~~~~~~~~~~~~~~~~~il~~l~~h~~I~~l~~~~~  118 (632)
                      ++.+++++ +.|+.|--=.+|++......... ...+.|.+++.-.....  .. ...+..+++.+..+...+.+++++ 
T Consensus        40 ~~~~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~--id-r~~E~~i~~~ls~~gl~Pkll~~~-  114 (395)
T d1nw1a_          40 VPLEHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETE--SH-LVAESVIFTLLSERHLGPKLYGIF-  114 (395)
T ss_dssp             CCGGGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCH--HH-HHHHHHHHHHHHHTTSSSCEEEEE-
T ss_pred             CCccceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchh--hH-HHHHHHHHHHHHhCCCCCeEEEEc-
Confidence            45667776 46888888999999876433211 22346777776532221  11 223334444454455455666655 


Q ss_pred             ECCEEEEEEecCCC
Q 006772          119 INGKICIAMKFYEG  132 (632)
Q Consensus       119 ~~~~l~LVmEy~~G  132 (632)
                       ++  .+||||++|
T Consensus       115 -~~--g~I~efi~g  125 (395)
T d1nw1a_         115 -SG--GRLEEYIPS  125 (395)
T ss_dssp             -TT--EEEECCCCE
T ss_pred             -CC--ceEEEEecc
Confidence             23  579999986

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.04  E-value=0.15  Score=50.01  Aligned_cols=27  Identities=15%  Similarity=0.064  Sum_probs=22.2

Q ss_pred             CceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          169 GLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       169 ~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      ++||+|+.|.|||+++ + ..++||+-+.
T Consensus       193 ~liHgDlh~~NvL~~~-~-~~~IDFdd~~  219 (325)
T d1zyla1         193 LRLHGDCHAGNILWRD-G-PMFVDLDDAR  219 (325)
T ss_dssp             EECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred             eeecCCCCcccEEEeC-C-ceEEechhcc
Confidence            5899999999999974 3 4589999654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.29  E-value=0.44  Score=45.92  Aligned_cols=30  Identities=20%  Similarity=0.237  Sum_probs=26.6

Q ss_pred             CCceeeeeeCCeEEEecCCcEEEEecCCce
Q 006772          168 IGLLVLNLKPSNLLLSEHDQLVLGDFGIPY  197 (632)
Q Consensus       168 ~~IvHRDLKP~NILld~~g~vkL~DFGlak  197 (632)
                      .++||+|+.+.|||++.+...-|.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            469999999999999988877899999764