Citrus Sinensis ID: 006783
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 631 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M3B6 | 710 | Plastidial pyruvate kinas | yes | no | 0.930 | 0.826 | 0.585 | 0.0 | |
| O08309 | 473 | Pyruvate kinase OS=Clostr | yes | no | 0.418 | 0.558 | 0.311 | 2e-27 | |
| Q92122 | 527 | Pyruvate kinase muscle is | N/A | no | 0.318 | 0.381 | 0.383 | 1e-26 | |
| P80885 | 585 | Pyruvate kinase OS=Bacill | yes | no | 0.443 | 0.478 | 0.314 | 5e-26 | |
| P12928 | 574 | Pyruvate kinase isozymes | yes | no | 0.318 | 0.350 | 0.369 | 1e-25 | |
| O62619 | 533 | Pyruvate kinase OS=Drosop | yes | no | 0.332 | 0.393 | 0.364 | 1e-25 | |
| Q9WY51 | 466 | Pyruvate kinase OS=Thermo | yes | no | 0.404 | 0.547 | 0.309 | 2e-25 | |
| Q54RF5 | 507 | Pyruvate kinase OS=Dictyo | yes | no | 0.350 | 0.435 | 0.353 | 2e-25 | |
| P11979 | 531 | Pyruvate kinase isozyme M | N/A | no | 0.318 | 0.378 | 0.369 | 3e-25 | |
| P11980 | 531 | Pyruvate kinase isozymes | no | no | 0.348 | 0.414 | 0.351 | 4e-25 |
| >sp|Q9M3B6|PKP4_ARATH Plastidial pyruvate kinase 4, chloroplastic OS=Arabidopsis thaliana GN=PKP4 PE=2 SV=1 | Back alignment and function desciption |
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Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/618 (58%), Positives = 452/618 (73%), Gaps = 31/618 (5%)
Query: 26 EDDISQSIENLKSQGSILDKLKAVHLHLLASERWNASRLKLCHRHYSDSARNLIHYLALR 85
E D+S S + S+++KL A+ HLLA+E+WNAS+L LC Y + A NL+HY+ALR
Sbjct: 95 EADLSGS-NGANNVASVIEKLNALRSHLLAAEKWNASQLHLCDSKYLECATNLVHYMALR 153
Query: 86 CLDLEQLKEDLSCNSLLNLESINSYILASLTAGIQLLDNQKSSSLNTQESILYQEENGNF 145
LD+EQL L+ L +L++ N +LA L A I LL N +++ ES G
Sbjct: 154 SLDIEQLNSHLASLGLSSLDNNNLDVLAHLNASINLLMNDQNA---VTESWTNVYPKGKS 210
Query: 146 MIQALGKKLSANKELLLGPLRHNQTNHIMVTVGQEA--SESEISDILKAGASIIRINCAH 203
+ ++ + KE LLG LR ++ HIMVT+G+EA SE+ I+DILKAG S+IRINCAH
Sbjct: 211 TKKNDKGRVLSYKESLLGKLREGRSTHIMVTIGEEATLSETFITDILKAGTSVIRINCAH 270
Query: 204 GNPSIWSEIIRRVKTSSQMLEMPCQILMDLAGPKLRTGNLKPGPCIIKISPKKNATGNVI 263
G+PSIW EII+RV+ +SQMLEMPC++ MDLAGPKLRTG LKPGPC++KISPKK+A GNV+
Sbjct: 271 GDPSIWGEIIKRVRRTSQMLEMPCRVHMDLAGPKLRTGTLKPGPCVMKISPKKDAYGNVV 330
Query: 264 LPSQVWLSHKDAGPPPSHLSPDAVLFIDDKKFLSELQVGHILKFSDAR------------ 311
P+ VWL PP+H+SPDA + + + FL+ LQ+G ++ DAR
Sbjct: 331 SPALVWLCLTGT-EPPAHVSPDATISVQGQDFLAGLQIGDSIRLCDARGRKRRLKISKEF 389
Query: 312 ----------ECSRTAYVQSGTELHRKGKKIRFPAAQVVDVPAVEPFIRLRVGDLLTISR 361
EC TAY++SGTEL KGKK R +VVDVP E F+RL+VGDLL I+R
Sbjct: 390 HVFNSTGFVAECFDTAYIESGTELSVKGKKGRRLVGRVVDVPPKESFVRLKVGDLLVITR 449
Query: 362 DSSCEQDESSEPISSAHRITCSSSCLFDSVKPGEPIAFDDGKIWGLIQGASISEIVVSIT 421
+ S DE S + AHR+TC S LFDSVKPGE I FDDGKIWG+I+G S SE++VSIT
Sbjct: 450 EGSL--DEPSVTVPGAHRLTCPSGYLFDSVKPGETIGFDDGKIWGVIKGTSPSEVIVSIT 507
Query: 422 HAGPRGTKLGSGKSINIPKSNIHFEGLTTKDLMDLEFVASHADMVGISFVRDSCDIAMLR 481
HA P+GTKLGS KSINIP+S+IHF+GLT+KD+ DL++VASHADMVGISF+RD DI +LR
Sbjct: 508 HARPKGTKLGSEKSINIPQSDIHFKGLTSKDIKDLDYVASHADMVGISFIRDVHDITVLR 567
Query: 482 KELEKRKVQNLGVVLKIETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLAD 541
+EL+KRK+ +LG+VLKIETKSGF+ L ILLEAMK SNPLG+MIARGDLAVECGWERLA+
Sbjct: 568 QELKKRKLDDLGIVLKIETKSGFKNLSLILLEAMKCSNPLGIMIARGDLAVECGWERLAN 627
Query: 542 MQEEILSICGAAHVPVIWATQVLESLVKFGVPTRAEITDVASARRASCVMLNKGKHVVEA 601
MQEEI++IC AA VPVI ATQVLESLVK GVPTRAEITD A+A+RASCVMLNKGK++VEA
Sbjct: 628 MQEEIIAICKAARVPVIMATQVLESLVKSGVPTRAEITDAANAKRASCVMLNKGKNIVEA 687
Query: 602 VSTLDKILHINTAQMKAD 619
VS LD ILH K+D
Sbjct: 688 VSMLDTILHTKLIYKKSD 705
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0 |
| >sp|O08309|KPYK_CLOAB Pyruvate kinase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=pyk PE=3 SV=2 | Back alignment and function description |
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| >sp|Q92122|KPYK_XENLA Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1 | Back alignment and function description |
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| >sp|P80885|KPYK_BACSU Pyruvate kinase OS=Bacillus subtilis (strain 168) GN=pyk PE=1 SV=2 | Back alignment and function description |
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| >sp|P12928|KPYR_RAT Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2 | Back alignment and function description |
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| >sp|O62619|KPYK_DROME Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9WY51|KPYK_THEMA Pyruvate kinase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=pyk PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54RF5|KPYK_DICDI Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=1 SV=1 | Back alignment and function description |
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| >sp|P11979|KPYM_FELCA Pyruvate kinase isozyme M1/M2 OS=Felis catus GN=PKM PE=1 SV=2 | Back alignment and function description |
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| >sp|P11980|KPYM_RAT Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 631 | ||||||
| 225462751 | 758 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.829 | 0.674 | 0.0 | |
| 224120658 | 612 | predicted protein [Populus trichocarpa] | 0.917 | 0.946 | 0.694 | 0.0 | |
| 255545022 | 618 | pyruvate kinase, putative [Ricinus commu | 0.917 | 0.936 | 0.669 | 0.0 | |
| 15229099 | 710 | pyruvate kinase [Arabidopsis thaliana] g | 0.930 | 0.826 | 0.585 | 0.0 | |
| 297819540 | 710 | pyruvate kinase family protein [Arabidop | 0.908 | 0.807 | 0.588 | 0.0 | |
| 302143672 | 622 | unnamed protein product [Vitis vinifera] | 0.469 | 0.475 | 0.757 | 1e-126 | |
| 168053903 | 626 | predicted protein [Physcomitrella patens | 0.849 | 0.856 | 0.400 | 1e-123 | |
| 168053775 | 606 | predicted protein [Physcomitrella patens | 0.863 | 0.899 | 0.413 | 1e-121 | |
| 305667724 | 624 | pyruvate kinase [Maribacter sp. HTCC2170 | 0.857 | 0.866 | 0.417 | 1e-111 | |
| 237808049 | 627 | pyruvate kinase [Tolumonas auensis DSM 9 | 0.916 | 0.921 | 0.408 | 1e-110 |
| >gi|225462751|ref|XP_002270689.1| PREDICTED: uncharacterized protein LOC100246758 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/664 (67%), Positives = 532/664 (80%), Gaps = 35/664 (5%)
Query: 1 MALHLDNNASSKYSDVEVVASISCLEDDISQSIENLKSQGSILDKLKAVHLHLLASERWN 60
M + + N S+ DVEV ASI+ E D+SQS L +QG++LDKLKAVHLH+LA E+WN
Sbjct: 97 MHMAPEYNDGSRDPDVEV-ASITLSEADLSQSAVQLGNQGNLLDKLKAVHLHILAMEQWN 155
Query: 61 ASRLKLCHRHYSDSARNLIHYLALRCLDLEQLKEDLSCNSLLNLESINSYILASLTAGIQ 120
ASR+KLCHR+Y SA NLIHYLAL+CLD+EQLKEDLS LLNLE+IN ++A+LTAGIQ
Sbjct: 156 ASRIKLCHRNYMASATNLIHYLALKCLDVEQLKEDLSSVGLLNLETINPCVIANLTAGIQ 215
Query: 121 LLDNQKSSSLNTQESI---------LYQEENGNFMIQALGKKLSANKELLLGPLRHNQTN 171
+L+N KS LN +E+ L +++ G F+I + KK S+N ++LLGPL +T
Sbjct: 216 MLENLKSYPLNIKENACGEISNKKSLDKQKKGEFIIDTMRKKASSNMKILLGPLADERTA 275
Query: 172 HIMVTVGQEASESE--ISDILKAGASIIRINCAHGNPSIWSEIIRRVKTSSQMLEMPCQI 229
HIMVTVGQE +E+E I+DILK+GA+IIRINCAHGNPSIWSEIIRRV+ SSQMLE PC+I
Sbjct: 276 HIMVTVGQEVTENETLITDILKSGATIIRINCAHGNPSIWSEIIRRVRRSSQMLEKPCRI 335
Query: 230 LMDLAGPKLRTGNLKPGPCIIKISPKKNATGNVILPSQVWLSHKDAGPPPSHLSPDAVLF 289
LMDLAGPKLRTGN+K GPC+IKISPKKNA G+++LP+QVWL HK A PP H+SPDA+L
Sbjct: 336 LMDLAGPKLRTGNMKAGPCVIKISPKKNACGDIMLPAQVWLCHKGANPPAGHISPDAILS 395
Query: 290 IDDKKFLSELQVGHILKFSDAR----------------------ECSRTAYVQSGTELHR 327
ID +KFL++LQ+G ++F DAR EC+RTAYVQSGT L+
Sbjct: 396 IDGQKFLNKLQLGDTVRFRDARGKKRTLKICNRFPVFAGTAFMAECNRTAYVQSGTGLYI 455
Query: 328 KGKKIRFPAAQVVDVPAVEPFIRLRVGDLLTISRDSSCEQDESSEPISSAHRITCSSSCL 387
KG+K + +VVDVPAVE F+RLRVGDLL IS DSS EQDE ++P A+R+TC SS L
Sbjct: 456 KGQKHKSSVGEVVDVPAVEQFVRLRVGDLLIISLDSSIEQDELTQPTVDAYRVTCPSSFL 515
Query: 388 FDSVKPGEPIAFDDGKIWGLIQGASISEIVVSITHAGPRGTKLGSGKSINIPKSNIHFEG 447
FDSVKPGEPIAFDDGKIWG+IQG S SEI+VSITHA PRGTKLG+ KSINIP+SNI FEG
Sbjct: 516 FDSVKPGEPIAFDDGKIWGVIQGTSASEIIVSITHASPRGTKLGAEKSINIPESNIRFEG 575
Query: 448 LTTKDLMDLEFVASHADMVGISFVRDSCDIAMLRKELEKRKVQNLGVVLKIETKSGFERL 507
LTTKDLMDLEFVA+HADMVGISF+RD DI +LR ELEKRK+ NLG+VLKIET SGF++L
Sbjct: 576 LTTKDLMDLEFVAAHADMVGISFIRDVRDIVVLRAELEKRKLHNLGIVLKIETSSGFDKL 635
Query: 508 PHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEEILSICGAAHVPVIWATQVLESL 567
P +LLEAMKS NPLGVMIARGDLAVECGWERL D+QEEILSIC AAHVPVIWATQVLESL
Sbjct: 636 PLLLLEAMKSPNPLGVMIARGDLAVECGWERLGDIQEEILSICSAAHVPVIWATQVLESL 695
Query: 568 VKFGVPTRAEITDVASARRASCVMLNKGKHVVEAVSTLDKILHINTAQMKADLMKPLLPS 627
VK GVPTRAE+TDVA+ RRASC+MLNKGKH+V+AVSTLD IL + +MKA+L KPL+ S
Sbjct: 696 VKSGVPTRAELTDVANGRRASCIMLNKGKHIVDAVSTLDIILQGKSTKMKAEL-KPLVLS 754
Query: 628 SHFF 631
SH F
Sbjct: 755 SHLF 758
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120658|ref|XP_002318385.1| predicted protein [Populus trichocarpa] gi|222859058|gb|EEE96605.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255545022|ref|XP_002513572.1| pyruvate kinase, putative [Ricinus communis] gi|223547480|gb|EEF48975.1| pyruvate kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|15229099|ref|NP_190485.1| pyruvate kinase [Arabidopsis thaliana] gi|75183756|sp|Q9M3B6.1|PKP4_ARATH RecName: Full=Plastidial pyruvate kinase 4, chloroplastic; Short=PKp4; Flags: Precursor gi|6723386|emb|CAB66395.1| pyruvate kinase-like protein [Arabidopsis thaliana] gi|18176182|gb|AAL59999.1| putative pyruvate kinase [Arabidopsis thaliana] gi|20465435|gb|AAM20177.1| putative pyruvate kinase [Arabidopsis thaliana] gi|332644985|gb|AEE78506.1| pyruvate kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297819540|ref|XP_002877653.1| pyruvate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297323491|gb|EFH53912.1| pyruvate kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|302143672|emb|CBI22533.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|168053903|ref|XP_001779373.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669171|gb|EDQ55763.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
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| >gi|168053775|ref|XP_001779310.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669322|gb|EDQ55912.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
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| >gi|305667724|ref|YP_003864011.1| pyruvate kinase [Maribacter sp. HTCC2170] gi|88709774|gb|EAR02007.1| pyruvate kinase [Maribacter sp. HTCC2170] | Back alignment and taxonomy information |
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| >gi|237808049|ref|YP_002892489.1| pyruvate kinase [Tolumonas auensis DSM 9187] gi|237500310|gb|ACQ92903.1| Pyruvate kinase [Tolumonas auensis DSM 9187] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 631 | ||||||
| TAIR|locus:2082866 | 710 | AT3G49160 [Arabidopsis thalian | 0.909 | 0.808 | 0.440 | 1.1e-110 | |
| TIGR_CMR|BA_3382 | 352 | BA_3382 "pyruvate kinase" [Bac | 0.427 | 0.767 | 0.300 | 3.1e-33 | |
| DICTYBASE|DDB_G0283247 | 507 | pyk "pyruvate kinase" [Dictyos | 0.356 | 0.443 | 0.350 | 3.9e-31 | |
| RGD|3336 | 574 | Pklr "pyruvate kinase, liver a | 0.318 | 0.350 | 0.369 | 4e-31 | |
| ZFIN|ZDB-GENE-010907-1 | 538 | pklr "pyruvate kinase, liver a | 0.277 | 0.325 | 0.363 | 2e-29 | |
| UNIPROTKB|P30613 | 574 | PKLR "Pyruvate kinase isozymes | 0.318 | 0.350 | 0.365 | 5.1e-29 | |
| MGI|MGI:97604 | 574 | Pklr "pyruvate kinase liver an | 0.318 | 0.350 | 0.351 | 5.1e-29 | |
| UNIPROTKB|G4MXS1 | 528 | MGG_08063 "Pyruvate kinase" [M | 0.351 | 0.420 | 0.348 | 1.6e-28 | |
| TIGR_CMR|CJE_0441 | 480 | CJE_0441 "pyruvate kinase" [Ca | 0.351 | 0.462 | 0.340 | 3.4e-28 | |
| UNIPROTKB|Q1JPG7 | 526 | PKLR "Pyruvate kinase" [Bos ta | 0.318 | 0.382 | 0.363 | 1.2e-27 |
| TAIR|locus:2082866 AT3G49160 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 273/620 (44%), Positives = 373/620 (60%)
Query: 27 DDISQSIENLKSQGSIL---DKLKAVHLHLLASERWNASRLKLCH----RHYS-DSARNL 78
++++ IE L + S L +K A LHL S+ + L H R + +
Sbjct: 105 NNVASVIEKLNALRSHLLAAEKWNASQLHLCDSKYLECAT-NLVHYMALRSLDIEQLNSH 163
Query: 79 IHYLALRCLDLEQLKEDLSCNSLLNL-ESINSYILASLT----AGIQLLDNQKSSSLNTQ 133
+ L L LD L N+ +NL + + + S T G N K L+ +
Sbjct: 164 LASLGLSSLDNNNLDVLAHLNASINLLMNDQNAVTESWTNVYPKGKSTKKNDKGRVLSYK 223
Query: 134 ESIL--YQEENGNFMIQALGKKLSANKELLLGPLRHNQTNHIMVTV--GQEASESEISDI 189
ES+L +E ++ +G++ + ++ + L+ T+ I + G + EI
Sbjct: 224 ESLLGKLREGRSTHIMVTIGEEATLSETFITDILKAG-TSVIRINCAHGDPSIWGEIIKR 282
Query: 190 LKAGASIIRINCAHGNPSIWSEIIRRVKTSSQMLEMPCQILMDLAGPKLRTGNL-KPGP- 247
++ + ++ + C + ++ + + PC +M ++ K GN+ P
Sbjct: 283 VRRTSQMLEMPCR-----VHMDLAGPKLRTGTLKPGPC--VMKISPKKDAYGNVVSPALV 335
Query: 248 --CIIKISPKKNAT--GNVILPSQVWLSHKDAGPPPSHLSPDAVLFIDDKKFLSELQVG- 302
C+ P + + + + Q +L+ G D++ D + L++
Sbjct: 336 WLCLTGTEPPAHVSPDATISVQGQDFLAGLQIG--------DSIRLCDARGRKRRLKISK 387
Query: 303 --HILKFSD-ARECSRTAYVQSGTELHRKGKKIRFPAAQVVDVPAVEPFIRLRVGDLLTI 359
H+ + EC TAY++SGTEL KGKK R +VVDVP E F+RL+VGDLL I
Sbjct: 388 EFHVFNSTGFVAECFDTAYIESGTELSVKGKKGRRLVGRVVDVPPKESFVRLKVGDLLVI 447
Query: 360 SRDSSCEQDESSEPISSAHRITCSSSCLFDSVKPGEPIAFDDGKIWGLIQGASISEIVVS 419
+R+ S DE S + AHR+TC S LFDSVKPGE I FDDGKIWG+I+G S SE++VS
Sbjct: 448 TREGSL--DEPSVTVPGAHRLTCPSGYLFDSVKPGETIGFDDGKIWGVIKGTSPSEVIVS 505
Query: 420 ITHAGPRGTKLGSGKSINIPKSNIHFEGLTTKDLMDLEFVASHADMVGISFVRDSCDIAM 479
ITHA P+GTKLGS KSINIP+S+IHF+GLT+KD+ DL++VASHADMVGISF+RD DI +
Sbjct: 506 ITHARPKGTKLGSEKSINIPQSDIHFKGLTSKDIKDLDYVASHADMVGISFIRDVHDITV 565
Query: 480 LRKELEKRKVQNLGVVLKIETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERL 539
LR+EL+KRK+ +LG+VLKIETKSGF+ L ILLEAMK SNPLG+MIARGDLAVECGWERL
Sbjct: 566 LRQELKKRKLDDLGIVLKIETKSGFKNLSLILLEAMKCSNPLGIMIARGDLAVECGWERL 625
Query: 540 ADMQEEILSICGAAHVPVIWATQVLESLVKFGVPTRAEITDVASARRASCVMLNKGKHVV 599
A+MQEEI++IC AA VPVI ATQVLESLVK GVPTRAEITD A+A+RASCVMLNKGK++V
Sbjct: 626 ANMQEEIIAICKAARVPVIMATQVLESLVKSGVPTRAEITDAANAKRASCVMLNKGKNIV 685
Query: 600 EAVSTLDKILHINTAQMKAD 619
EAVS LD ILH K+D
Sbjct: 686 EAVSMLDTILHTKLIYKKSD 705
|
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| TIGR_CMR|BA_3382 BA_3382 "pyruvate kinase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0283247 pyk "pyruvate kinase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| RGD|3336 Pklr "pyruvate kinase, liver and RBC" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-010907-1 pklr "pyruvate kinase, liver and RBC" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P30613 PKLR "Pyruvate kinase isozymes R/L" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:97604 Pklr "pyruvate kinase liver and red blood cell" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4MXS1 MGG_08063 "Pyruvate kinase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CJE_0441 CJE_0441 "pyruvate kinase" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q1JPG7 PKLR "Pyruvate kinase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9M3B6 | PKP4_ARATH | 2, ., 7, ., 1, ., 4, 0 | 0.5857 | 0.9302 | 0.8267 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.1.40 | 0.737 |
| 3rd Layer | 2.7.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.XII.1350.1 | hypothetical protein (612 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | eugene3.00030830 | • | • | • | 0.954 | ||||||
 | estExt_fgenesh4_pm.C_LG_XII0191 | • | • | 0.922 | |||||||
 | estExt_fgenesh4_pm.C_280132 | • | • | 0.922 | |||||||
 | eugene3.00151093 | • | • | 0.921 | |||||||
 | fgenesh4_pg.C_LG_II001653 | • | 0.905 | ||||||||
 | eugene3.00400106 | • | • | 0.903 | |||||||
 | fgenesh4_pg.C_LG_XII000913 | • | • | 0.903 | |||||||
 | estExt_Genewise1_v1.C_LG_XI3607 | • | 0.902 | ||||||||
 | estExt_Genewise1_v1.C_1460016 | • | 0.902 | ||||||||
 | eugene3.00001960 | • | 0.902 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 631 | |||
| PRK14725 | 608 | PRK14725, PRK14725, pyruvate kinase; Provisional | 0.0 | |
| PRK08187 | 493 | PRK08187, PRK08187, pyruvate kinase; Validated | 1e-104 | |
| COG0469 | 477 | COG0469, PykF, Pyruvate kinase [Carbohydrate trans | 1e-50 | |
| PRK05826 | 465 | PRK05826, PRK05826, pyruvate kinase; Provisional | 2e-47 | |
| TIGR01064 | 473 | TIGR01064, pyruv_kin, pyruvate kinase | 2e-47 | |
| PRK06247 | 476 | PRK06247, PRK06247, pyruvate kinase; Provisional | 8e-39 | |
| pfam00224 | 348 | pfam00224, PK, Pyruvate kinase, barrel domain | 3e-38 | |
| cd00288 | 480 | cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La | 2e-37 | |
| PRK06354 | 590 | PRK06354, PRK06354, pyruvate kinase; Provisional | 1e-31 | |
| PRK08187 | 493 | PRK08187, PRK08187, pyruvate kinase; Validated | 1e-28 | |
| PRK09206 | 470 | PRK09206, PRK09206, pyruvate kinase; Provisional | 2e-28 | |
| PTZ00066 | 513 | PTZ00066, PTZ00066, pyruvate kinase; Provisional | 1e-26 | |
| PRK06739 | 352 | PRK06739, PRK06739, pyruvate kinase; Validated | 4e-26 | |
| PLN02461 | 511 | PLN02461, PLN02461, Probable pyruvate kinase | 9e-26 | |
| PTZ00300 | 454 | PTZ00300, PTZ00300, pyruvate kinase; Provisional | 2e-25 | |
| PLN02762 | 509 | PLN02762, PLN02762, pyruvate kinase complex alpha | 8e-23 | |
| PLN02623 | 581 | PLN02623, PLN02623, pyruvate kinase | 3e-21 | |
| COG0469 | 477 | COG0469, PykF, Pyruvate kinase [Carbohydrate trans | 1e-15 | |
| PLN02765 | 526 | PLN02765, PLN02765, pyruvate kinase | 5e-15 | |
| PRK05826 | 465 | PRK05826, PRK05826, pyruvate kinase; Provisional | 1e-13 | |
| TIGR01064 | 473 | TIGR01064, pyruv_kin, pyruvate kinase | 3e-12 | |
| pfam00224 | 348 | pfam00224, PK, Pyruvate kinase, barrel domain | 3e-10 | |
| cd00288 | 480 | cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La | 4e-10 | |
| PRK06247 | 476 | PRK06247, PRK06247, pyruvate kinase; Provisional | 2e-07 | |
| PRK06354 | 590 | PRK06354, PRK06354, pyruvate kinase; Provisional | 2e-07 | |
| PLN02461 | 511 | PLN02461, PLN02461, Probable pyruvate kinase | 6e-05 | |
| PRK06739 | 352 | PRK06739, PRK06739, pyruvate kinase; Validated | 2e-04 | |
| PTZ00066 | 513 | PTZ00066, PTZ00066, pyruvate kinase; Provisional | 0.003 | |
| PRK09206 | 470 | PRK09206, PRK09206, pyruvate kinase; Provisional | 0.004 |
| >gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
Score = 565 bits (1459), Expect = 0.0
Identities = 258/591 (43%), Positives = 351/591 (59%), Gaps = 37/591 (6%)
Query: 40 GSILDKLKAVHLHLLASERWNASRLKLCHRHYSDSARNLIHYLALRCLDLEQLKEDLSCN 99
+L+ L + L A+E +A L + SARNL+HYLALR DL L+E L+
Sbjct: 16 QRLLEALDELRARLAAAEAAHADWLAAVDPSHRASARNLLHYLALRQHDLRDLQEALADL 75
Query: 100 SLLNLESINSYILASLTAGIQLLDNQKSSSLNTQESILYQEENGNFMIQALGKKLSANKE 159
L +L +++LA+L A + +L E Y E+ + + L + E
Sbjct: 76 GLSSLGRAEAHVLAALDAVLAVLRAL------LGEGPAYPPEDTAVTFEEGDELLDEHAE 129
Query: 160 LLLGPLRHNQTNHIMVTVGQEASE--SEISDILKAGASIIRINCAHGNPSIWSEIIRRVK 217
LLGP + IMVT+ EA++ + +L AG I RINCAH +P W +I V+
Sbjct: 130 ALLGPPPSGRPTRIMVTLPTEAADDPDLVRRLLAAGMDIARINCAHDDPEAWRAMIANVR 189
Query: 218 TSSQMLEMPCQILMDLAGPKLRTGNLKPGPCIIKISPKKNATGNVILPSQVWLSHKDAGP 277
T+ + L C+I MDLAGPKLRTG + PGP +IK+ P ++A G V+ P+++WL+ ++ P
Sbjct: 190 TAEEELGRRCRIAMDLAGPKLRTGPIAPGPRVIKLRPTRDALGRVLTPARLWLTASES-P 248
Query: 278 PPSHLSPDAVLFIDDKKFLSELQVGHILKFSDAR------------------ECSRTAYV 319
PPS L +D ++L+ L+ G L+F+DAR E S+TAY+
Sbjct: 249 PPSPPPGPVGLPVD-PEWLARLEPGDELRFTDARGKKRKLTVTEVDDEGVLAEGSQTAYL 307
Query: 320 QSGTELHRKGKKIRFPAAQVVDVPAVEPFIRLRVGDLLTISRDSS-CEQDESSEPISSAH 378
+GT L + +V +P VE +RL+VGD L ++RD + + + P +
Sbjct: 308 ANGTLLRLGRHD----STRVGGLPPVEQKLRLKVGDRLVLTRDDAPGDPAQGDAPPA--- 360
Query: 379 RITCSSSCLFDSVKPGEPIAFDDGKIWGLIQGASISEIVVSITHAGPRGTKLGSGKSINI 438
RI+C+ F + + GE + FDDGKI ++ E+ + ITHA P G+KL +GK IN+
Sbjct: 361 RISCTLPEAFRAARVGERVWFDDGKIGAVVVKVEADEVELRITHARPGGSKLKAGKGINL 420
Query: 439 PKSNIHFEGLTTKDLMDLEFVASHADMVGISFVRDSCDIAMLRKELEKRKVQNLGVVLKI 498
P S++ LT KDL DL FVA HAD+V +SFVR D+ +L LEK +LGVVLKI
Sbjct: 421 PDSHLPLPALTDKDLEDLAFVAKHADIVALSFVRSPEDVRLLLDALEKLGADDLGVVLKI 480
Query: 499 ETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEEILSICGAAHVPVI 558
ET+ FE LP ILLEAM+ GVMIARGDLAVE G+ERLA++QEEIL +C AAHVPVI
Sbjct: 481 ETRRAFENLPRILLEAMRHP-RFGVMIARGDLAVEVGFERLAEVQEEILWLCEAAHVPVI 539
Query: 559 WATQVLESLVKFGVPTRAEITDVASARRASCVMLNKGKHVVEAVSTLDKIL 609
WATQVLESL K G+P+RAEITD A A RA CVMLNKG H+VEAV LD IL
Sbjct: 540 WATQVLESLAKKGLPSRAEITDAAMALRAECVMLNKGPHIVEAVRVLDDIL 590
|
Length = 608 |
| >gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors | Back alignment and domain information |
|---|
| >gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors | Back alignment and domain information |
|---|
| >gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 631 | |||
| PRK14725 | 608 | pyruvate kinase; Provisional | 100.0 | |
| PRK08187 | 493 | pyruvate kinase; Validated | 100.0 | |
| PF00224 | 348 | PK: Pyruvate kinase, barrel domain; InterPro: IPR0 | 100.0 | |
| PLN02762 | 509 | pyruvate kinase complex alpha subunit | 100.0 | |
| PRK06739 | 352 | pyruvate kinase; Validated | 100.0 | |
| PRK09206 | 470 | pyruvate kinase; Provisional | 100.0 | |
| PLN02461 | 511 | Probable pyruvate kinase | 100.0 | |
| PTZ00066 | 513 | pyruvate kinase; Provisional | 100.0 | |
| COG0469 | 477 | PykF Pyruvate kinase [Carbohydrate transport and m | 100.0 | |
| PRK06247 | 476 | pyruvate kinase; Provisional | 100.0 | |
| PLN02765 | 526 | pyruvate kinase | 100.0 | |
| cd00288 | 480 | Pyruvate_Kinase Pyruvate kinase (PK): Large allost | 100.0 | |
| PRK06354 | 590 | pyruvate kinase; Provisional | 100.0 | |
| PRK05826 | 465 | pyruvate kinase; Provisional | 100.0 | |
| PLN02623 | 581 | pyruvate kinase | 100.0 | |
| PTZ00300 | 454 | pyruvate kinase; Provisional | 100.0 | |
| TIGR01064 | 473 | pyruv_kin pyruvate kinase. This enzyme is a homote | 100.0 | |
| KOG2323 | 501 | consensus Pyruvate kinase [Carbohydrate transport | 100.0 | |
| TIGR03239 | 249 | GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co | 99.43 | |
| PRK10558 | 256 | alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro | 99.43 | |
| PRK10128 | 267 | 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional | 99.33 | |
| COG3836 | 255 | HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola | 99.33 | |
| TIGR02311 | 249 | HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola | 99.27 | |
| PF03328 | 221 | HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family | 99.25 | |
| TIGR01588 | 288 | citE citrate lyase, beta subunit. This is a model | 98.9 | |
| PRK06464 | 795 | phosphoenolpyruvate synthase; Validated | 98.8 | |
| TIGR01418 | 782 | PEP_synth phosphoenolpyruvate synthase. Also calle | 98.71 | |
| TIGR01417 | 565 | PTS_I_fam phosphoenolpyruvate-protein phosphotrans | 98.62 | |
| PRK11177 | 575 | phosphoenolpyruvate-protein phosphotransferase; Pr | 98.56 | |
| COG2301 | 283 | CitE Citrate lyase beta subunit [Carbohydrate tran | 97.62 | |
| cd00480 | 511 | malate_synt Malate synthase catalyzes the Claisen | 97.6 | |
| cd00727 | 511 | malate_synt_A Malate synthase A (MSA), present in | 97.39 | |
| TIGR01344 | 511 | malate_syn_A malate synthase A. This model represe | 97.36 | |
| KOG2323 | 501 | consensus Pyruvate kinase [Carbohydrate transport | 97.29 | |
| PF02896 | 293 | PEP-utilizers_C: PEP-utilising enzyme, TIM barrel | 97.25 | |
| PRK09255 | 531 | malate synthase; Validated | 97.13 | |
| PLN02626 | 551 | malate synthase | 96.44 | |
| TIGR02751 | 506 | PEPCase_arch phosphoenolpyruvate carboxylase, arch | 96.43 | |
| PRK13655 | 494 | phosphoenolpyruvate carboxylase; Provisional | 95.8 | |
| PRK08649 | 368 | inosine 5-monophosphate dehydrogenase; Validated | 95.58 | |
| PRK11061 | 748 | fused phosphoenolpyruvate-protein phosphotransfera | 95.57 | |
| PTZ00398 | 974 | phosphoenolpyruvate carboxylase; Provisional | 94.87 | |
| PRK00009 | 911 | phosphoenolpyruvate carboxylase; Reviewed | 94.44 | |
| cd00381 | 325 | IMPDH IMPDH: The catalytic domain of the inosine m | 94.09 | |
| TIGR01304 | 369 | IMP_DH_rel_2 IMP dehydrogenase family protein. Thi | 93.29 | |
| cd04740 | 296 | DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c | 92.33 | |
| PLN02274 | 505 | inosine-5'-monophosphate dehydrogenase | 92.16 | |
| TIGR01828 | 856 | pyru_phos_dikin pyruvate, phosphate dikinase. This | 91.99 | |
| PTZ00314 | 495 | inosine-5'-monophosphate dehydrogenase; Provisiona | 91.76 | |
| PRK08318 | 420 | dihydropyrimidine dehydrogenase subunit B; Validat | 91.43 | |
| PF00478 | 352 | IMPDH: IMP dehydrogenase / GMP reductase domain; I | 91.2 | |
| TIGR03151 | 307 | enACPred_II putative enoyl-(acyl-carrier-protein) | 91.17 | |
| cd02810 | 289 | DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) | 90.31 | |
| TIGR01302 | 450 | IMP_dehydrog inosine-5'-monophosphate dehydrogenas | 90.23 | |
| PRK07107 | 502 | inosine 5-monophosphate dehydrogenase; Validated | 90.06 | |
| TIGR01305 | 343 | GMP_reduct_1 guanosine monophosphate reductase, eu | 89.87 | |
| TIGR01037 | 300 | pyrD_sub1_fam dihydroorotate dehydrogenase (subfam | 89.82 | |
| COG1080 | 574 | PtsA Phosphoenolpyruvate-protein kinase (PTS syste | 89.78 | |
| PRK05286 | 344 | dihydroorotate dehydrogenase 2; Reviewed | 89.69 | |
| TIGR01306 | 321 | GMP_reduct_2 guanosine monophosphate reductase, ba | 89.29 | |
| cd02940 | 299 | DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM | 88.94 | |
| PRK07259 | 301 | dihydroorotate dehydrogenase 1B; Reviewed | 88.6 | |
| PRK05096 | 346 | guanosine 5'-monophosphate oxidoreductase; Provisi | 88.5 | |
| PRK06843 | 404 | inosine 5-monophosphate dehydrogenase; Validated | 88.23 | |
| PRK07807 | 479 | inosine 5-monophosphate dehydrogenase; Validated | 87.88 | |
| PRK07565 | 334 | dihydroorotate dehydrogenase 2; Reviewed | 87.77 | |
| cd04738 | 327 | DHOD_2_like Dihydroorotate dehydrogenase (DHOD) cl | 86.44 | |
| PRK05458 | 326 | guanosine 5'-monophosphate oxidoreductase; Provisi | 85.9 | |
| PRK09279 | 879 | pyruvate phosphate dikinase; Provisional | 85.71 | |
| PLN02826 | 409 | dihydroorotate dehydrogenase | 84.98 | |
| cd04732 | 234 | HisA HisA. Phosphoribosylformimino-5-aminoimidazol | 84.51 | |
| PF03102 | 241 | NeuB: NeuB family; InterPro: IPR013132 NeuB is the | 84.14 | |
| PRK05567 | 486 | inosine 5'-monophosphate dehydrogenase; Reviewed | 83.52 | |
| PTZ00170 | 228 | D-ribulose-5-phosphate 3-epimerase; Provisional | 83.44 | |
| COG3605 | 756 | PtsP Signal transduction protein containing GAF an | 83.44 | |
| cd04722 | 200 | TIM_phosphate_binding TIM barrel proteins share a | 83.16 | |
| PRK13210 | 284 | putative L-xylulose 5-phosphate 3-epimerase; Revie | 82.92 | |
| cd00958 | 235 | DhnA Class I fructose-1,6-bisphosphate (FBP) aldol | 82.22 | |
| TIGR00736 | 231 | nifR3_rel_arch TIM-barrel protein, putative. Membe | 81.96 | |
| PF00311 | 794 | PEPcase: Phosphoenolpyruvate carboxylase; InterPro | 81.38 | |
| cd04724 | 242 | Tryptophan_synthase_alpha Ttryptophan synthase (TR | 80.04 |
| >PRK14725 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-162 Score=1333.64 Aligned_cols=575 Identities=45% Similarity=0.701 Sum_probs=531.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCCCchhHHHHHHHHHhhccchHHHHHHHhhCcccccCCchhhhHHhH
Q 006783 36 LKSQGSILDKLKAVHLHLLASERWNASRLKLCHRHYSDSARNLIHYLALRCLDLEQLKEDLSCNSLLNLESINSYILASL 115 (631)
Q Consensus 36 ~~~~~~l~~~l~~lr~~~~~~~~~~~~~~~~~~~~~~~sa~Nl~~YlalR~~Dlr~LQ~~L~~~GlssLgr~E~~v~~~l 115 (631)
...+.+|+++|++||+++.+.++|+..++.+++|.|++||+||+||||||+||+|+||++|+++|||||||+|+||+++|
T Consensus 12 ~~~~~~l~~~l~~L~~~~~~~~~~~~~~~~~~~p~~~~sa~NL~hYlalR~~Dlr~Lq~~L~~~GlssLg~~E~~vl~~L 91 (608)
T PRK14725 12 QEELQRLLEALDELRARLAAAEAAHADWLAAVDPSHRASARNLLHYLALRQHDLRDLQEALADLGLSSLGRAEAHVLAAL 91 (608)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHhCccccccchhhHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcccccccccccchhhhHhHHhHHHHhHHhhcCCCCCCCCeEEEEecCCCCChHH--HHHHHHhC
Q 006783 116 TAGIQLLDNQKSSSLNTQESILYQEENGNFMIQALGKKLSANKELLLGPLRHNQTNHIMVTVGQEASESE--ISDILKAG 193 (631)
Q Consensus 116 ~~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~l~G~~~~~R~TkImvTlgp~aa~~~--i~~Li~aG 193 (631)
++|+++|++++|++.. +++.+...++.+|+++|++|+++|||+++..|+|||||||||++++++ |++|+++|
T Consensus 92 ~av~~~l~~l~~~~~~------~~~~~~~~~~~~g~~lL~~~~~~l~G~~~~~R~tkImvTlg~~Aa~d~e~i~~Li~aG 165 (608)
T PRK14725 92 DAVLAVLRALLGEGPA------YPPEDTAVTFEEGDELLDEHAEALLGPPPSGRPTRIMVTLPTEAADDPDLVRRLLAAG 165 (608)
T ss_pred HHHHHHHHHHhCCCCC------CCCCCchhhhhhHHHHHHHHHHHhcCCCCCCCCceEEEeCCCcccCCHHHHHHHHHcC
Confidence 9999999999998542 233446666677779999999999999999999999999997666554 99999999
Q ss_pred CCEEEeecCCCChHHHHHHHHHHHHHHhhcCCceEEEecCCCCeeeeeccCCCCceeccCCCCCCCCccccCcccccccC
Q 006783 194 ASIIRINCAHGNPSIWSEIIRRVKTSSQMLEMPCQILMDLAGPKLRTGNLKPGPCIIKISPKKNATGNVILPSQVWLSHK 273 (631)
Q Consensus 194 MdvaRINcAHg~~e~w~~mI~~vR~a~~~~g~~~~IlmDL~GPKIRtG~i~~gp~v~~~~p~rd~~G~v~~pa~~wl~~~ 273 (631)
|||||||||||+|++|++||+|||++++++|++|+|+|||+|||||||.++++|.++|++|+||++|+|++||++||++.
T Consensus 166 mdvaRINcAHg~~e~w~~mi~~vR~a~~~~gr~~~I~mDL~GPKiRtG~l~~g~~v~~~~p~rd~~G~v~~pa~~~l~~~ 245 (608)
T PRK14725 166 MDIARINCAHDDPEAWRAMIANVRTAEEELGRRCRIAMDLAGPKLRTGPIAPGPRVIKLRPTRDALGRVLTPARLWLTAS 245 (608)
T ss_pred CCEeeeECCCCCHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCcceEEecCCCccccccccccccccccccchhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCceeeccchhhhhhccCCCEEEEeccc------------------cccchhhhccCccccccccccccC
Q 006783 274 DAGPPPSHLSPDAVLFIDDKKFLSELQVGHILKFSDAR------------------ECSRTAYVQSGTELHRKGKKIRFP 335 (631)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~Gd~v~l~d~r------------------~~~~~~y~~~gt~~~~~g~~~~~~ 335 (631)
+++|++ .++....+.++++|+.+++.||+|+|+|+| +|.+++|+++||.+.+.+ ..
T Consensus 246 ~~~~~~--~~~~~~~~~v~~~~~~~l~~Gd~i~~~DaRg~~R~l~V~~~~~~~~~~~~~~~~Y~~~G~~l~~~~----~~ 319 (608)
T PRK14725 246 ESPPPS--PPPGPVGLPVDPEWLARLEPGDELRFTDARGKKRKLTVTEVDDEGVLAEGSQTAYLANGTLLRLGR----HD 319 (608)
T ss_pred cCCCCC--CCccccccccChhhhhhcCCCceeeeeeccccceeeeEEeecCceeEEeecceeeeccCceeeecc----cc
Confidence 764333 233344466799999999999999999999 799999999999998854 45
Q ss_pred CcccccCCCCccceecccCceEEeccCCCcccCCCCCCCCCccEEeeCchhhhcccCCCCcEEEeCCeEEEEEEEEeCCE
Q 006783 336 AAQVVDVPAVEPFIRLRVGDLLTISRDSSCEQDESSEPISSAHRITCSSSCLFDSVKPGEPIAFDDGKIWGLIQGASISE 415 (631)
Q Consensus 336 ~~~~~~~p~~~~~i~l~~Gd~l~lt~~~~~~~~~~~~~~~~~~~I~ct~p~l~~~v~~Gd~I~iDDGkI~~~V~~v~~~~ 415 (631)
.++++++|..||.++|++||+|.|+++..+.....+. ...++|+||+|++|+.+++||+||||||+|.++|++++++.
T Consensus 320 ~~~v~~~p~~~~~i~L~~Gd~l~lt~~~~~~~~~~~~--~~~~~i~~t~p~l~~~v~~G~~VlidDG~I~l~V~~~~~~~ 397 (608)
T PRK14725 320 STRVGGLPPVEQKLRLKVGDRLVLTRDDAPGDPAQGD--APPARISCTLPEAFRAARVGERVWFDDGKIGAVVVKVEADE 397 (608)
T ss_pred ccccccccccCcceEecCCCEEEEecCCcCCccccCC--CCccEEEechHHHHHhcCCCCEEEEeCCeEEEEEEEEECCE
Confidence 6778999999999999999999999874321100010 11248999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCceecCCceeecCCCcccCCCCChhcHHhHHHHHhcCCEEEEeccCChhHHHHHHHHHHHhCCCCceEE
Q 006783 416 IVVSITHAGPRGTKLGSGKSINIPKSNIHFEGLTTKDLMDLEFVASHADMVGISFVRDSCDIAMLRKELEKRKVQNLGVV 495 (631)
Q Consensus 416 i~~~V~~a~~~Gg~L~s~KGINlP~~~l~lp~LTekD~~dl~f~~~~~D~V~~SFV~sa~Dv~~lr~~L~~~~~~~~~Ii 495 (631)
+.|+|++++++||+|+++||||||++.+++|+||+||++||+|+++++|||++|||++++||..++++|.++|.++++||
T Consensus 398 v~~~V~~a~~~gg~L~s~KGiNlP~~~l~lp~LTekD~~dl~f~~~~vD~ValSFVrs~~DV~~lr~~L~~~g~~~~~Ii 477 (608)
T PRK14725 398 VELRITHARPGGSKLKAGKGINLPDSHLPLPALTDKDLEDLAFVAKHADIVALSFVRSPEDVRLLLDALEKLGADDLGVV 477 (608)
T ss_pred EEEEEEEecCCCCEecCCCceecCCCCCCCCCCCHHHHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHHHHcCCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred EeecChhhhcchHHHHHHhhcCCCCcEEEEecCCcccccChhhHHHHHHHHHHHHHhcCCCEEEEechhhhhhhCCCCCh
Q 006783 496 LKIETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEEILSICGAAHVPVIWATQVLESLVKFGVPTR 575 (631)
Q Consensus 496 aKIEt~~av~NL~eIl~~a~~~~~~DGImIaRGDL~veig~e~l~~~Qk~Ii~~c~aagkPvi~ATQvLESM~~~~~PtR 575 (631)
|||||++||+||++|+.++|++. +|||||||||||+|+|+++|+++||+|||+|+++||||||||||||||++||+|||
T Consensus 478 aKIEt~~av~nL~eIl~~am~~~-~DGIMIARGDLgvEi~~e~lp~iQk~Ii~~c~~~~kPVI~ATQmLESM~~~p~PTR 556 (608)
T PRK14725 478 LKIETRRAFENLPRILLEAMRHP-RFGVMIARGDLAVEVGFERLAEVQEEILWLCEAAHVPVIWATQVLESLAKKGLPSR 556 (608)
T ss_pred EEECCHHHHHHHHHHHHhhccCC-CcEEEEECCccccccCHHHHHHHHHHHHHHHHHcCCCEEEEcchHhhhccCCCCCc
Confidence 99999999999999999999987 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhccccCcccccCCccHHHHHHHHHHHHHHHhhc--ccccccCCCC
Q 006783 576 AEITDVASARRASCVMLNKGKHVVEAVSTLDKILHINTAQ--MKADLMKPLL 625 (631)
Q Consensus 576 AEvtDva~a~gaD~vmLskG~ypveAV~~L~~Il~r~e~~--~k~~~lr~l~ 625 (631)
||+||||||.||||||||+|+||+|||++|++|+++||.| ||+++||+|+
T Consensus 557 AEvtDVAnAvgaD~VMLS~G~yPveAV~~l~~I~~r~e~~~~Kk~~~lr~l~ 608 (608)
T PRK14725 557 AEITDAAMALRAECVMLNKGPHIVEAVRVLDDILRRMEEHQRKKRSLLRRLR 608 (608)
T ss_pred hhHHHHHhhhcCCEEeecCCCCHHHHHHHHHHHHHHHHHhhhccchhhcccC
Confidence 9999999999999999999999999999999999999988 3566999986
|
|
| >PRK08187 pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 | Back alignment and domain information |
|---|
| >PLN02762 pyruvate kinase complex alpha subunit | Back alignment and domain information |
|---|
| >PRK06739 pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >PRK09206 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02461 Probable pyruvate kinase | Back alignment and domain information |
|---|
| >PTZ00066 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06247 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02765 pyruvate kinase | Back alignment and domain information |
|---|
| >cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors | Back alignment and domain information |
|---|
| >PRK06354 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05826 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02623 pyruvate kinase | Back alignment and domain information |
|---|
| >PTZ00300 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01064 pyruv_kin pyruvate kinase | Back alignment and domain information |
|---|
| >KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase | Back alignment and domain information |
|---|
| >PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional | Back alignment and domain information |
|---|
| >PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional | Back alignment and domain information |
|---|
| >COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | Back alignment and domain information |
|---|
| >PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 | Back alignment and domain information |
|---|
| >TIGR01588 citE citrate lyase, beta subunit | Back alignment and domain information |
|---|
| >PRK06464 phosphoenolpyruvate synthase; Validated | Back alignment and domain information |
|---|
| >TIGR01418 PEP_synth phosphoenolpyruvate synthase | Back alignment and domain information |
|---|
| >TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase | Back alignment and domain information |
|---|
| >PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional | Back alignment and domain information |
|---|
| >COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA | Back alignment and domain information |
|---|
| >cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi | Back alignment and domain information |
|---|
| >TIGR01344 malate_syn_A malate synthase A | Back alignment and domain information |
|---|
| >KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] | Back alignment and domain information |
|---|
| >PRK09255 malate synthase; Validated | Back alignment and domain information |
|---|
| >PLN02626 malate synthase | Back alignment and domain information |
|---|
| >TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type | Back alignment and domain information |
|---|
| >PRK13655 phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
| >PRK08649 inosine 5-monophosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional | Back alignment and domain information |
|---|
| >PTZ00398 phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
| >PRK00009 phosphoenolpyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase | Back alignment and domain information |
|---|
| >TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein | Back alignment and domain information |
|---|
| >cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain | Back alignment and domain information |
|---|
| >PLN02274 inosine-5'-monophosphate dehydrogenase | Back alignment and domain information |
|---|
| >TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase | Back alignment and domain information |
|---|
| >PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated | Back alignment and domain information |
|---|
| >PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase | Back alignment and domain information |
|---|
| >TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II | Back alignment and domain information |
|---|
| >cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain | Back alignment and domain information |
|---|
| >TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase | Back alignment and domain information |
|---|
| >PRK07107 inosine 5-monophosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic | Back alignment and domain information |
|---|
| >TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein | Back alignment and domain information |
|---|
| >COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05286 dihydroorotate dehydrogenase 2; Reviewed | Back alignment and domain information |
|---|
| >TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial | Back alignment and domain information |
|---|
| >cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain | Back alignment and domain information |
|---|
| >PRK07259 dihydroorotate dehydrogenase 1B; Reviewed | Back alignment and domain information |
|---|
| >PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK06843 inosine 5-monophosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK07807 inosine 5-monophosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK07565 dihydroorotate dehydrogenase 2; Reviewed | Back alignment and domain information |
|---|
| >cd04738 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) class 2 | Back alignment and domain information |
|---|
| >PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK09279 pyruvate phosphate dikinase; Provisional | Back alignment and domain information |
|---|
| >PLN02826 dihydroorotate dehydrogenase | Back alignment and domain information |
|---|
| >cd04732 HisA HisA | Back alignment and domain information |
|---|
| >PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac) | Back alignment and domain information |
|---|
| >PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional | Back alignment and domain information |
|---|
| >COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure | Back alignment and domain information |
|---|
| >PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
| >cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea | Back alignment and domain information |
|---|
| >TIGR00736 nifR3_rel_arch TIM-barrel protein, putative | Back alignment and domain information |
|---|
| >PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] | Back alignment and domain information |
|---|
| >cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 631 | ||||
| 1pkm_A | 530 | The Refined Three-Dimensional Structure Of Cat Musc | 2e-26 | ||
| 3bjf_A | 518 | Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro | 5e-26 | ||
| 4g1n_A | 518 | Pkm2 In Complex With An Activator Length = 518 | 5e-26 | ||
| 3bjt_A | 530 | Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro | 5e-26 | ||
| 3srf_C | 551 | Human M1 Pyruvate Kinase Length = 551 | 5e-26 | ||
| 3g2g_A | 533 | S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo | 6e-26 | ||
| 3u2z_A | 533 | Activator-Bound Structure Of Human Pyruvate Kinase | 6e-26 | ||
| 3gqy_A | 550 | Activator-Bound Structure Of Human Pyruvate Kinase | 6e-26 | ||
| 1t5a_A | 567 | Human Pyruvate Kinase M2 Length = 567 | 6e-26 | ||
| 3srd_A | 551 | Human M2 Pyruvate Kinase In Complex With Fructose 1 | 6e-26 | ||
| 4b2d_D | 548 | Human Pkm2 With L-serine And Fbp Bound Length = 548 | 6e-26 | ||
| 1zjh_A | 548 | Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le | 6e-26 | ||
| 1pkn_A | 530 | Structure Of Rabbit Muscle Pyruvate Kinase Complexe | 1e-25 | ||
| 3n25_A | 531 | The Structure Of Muscle Pyruvate Kinase In Complex | 1e-25 | ||
| 1aqf_A | 530 | Pyruvate Kinase From Rabbit Muscle With Mg, K, And | 1e-25 | ||
| 2g50_A | 530 | The Location Of The Allosteric Amino Acid Binding S | 1e-25 | ||
| 1f3x_A | 530 | S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt | 1e-25 | ||
| 1f3w_A | 530 | Recombinant Rabbit Muscle Pyruvate Kinase Length = | 1e-25 | ||
| 4ima_A | 543 | The Structure Of C436m-hlpyk In Complex With Citrat | 4e-25 | ||
| 4ip7_A | 543 | Structure Of The S12d Variant Of Human Liver Pyruva | 6e-25 | ||
| 2vgg_A | 528 | Human Erythrocyte Pyruvate Kinase: R479h Mutant Len | 7e-25 | ||
| 2vgb_A | 528 | Human Erythrocyte Pyruvate Kinase Length = 528 | 8e-25 | ||
| 2vgi_A | 528 | Human Erythrocyte Pyruvate Kinase: R486w Mutant Len | 9e-25 | ||
| 2vgf_A | 528 | Human Erythrocyte Pyruvate Kinase: T384m Mutant Len | 4e-24 | ||
| 3pp7_A | 498 | Crystal Structure Of Leishmania Mexicana Pyruvate K | 5e-24 | ||
| 1pkl_A | 499 | The Structure Of Leishmania Pyruvate Kinase Length | 6e-24 | ||
| 3e0v_A | 539 | Crystal Structure Of Pyruvate Kinase From Leishmani | 8e-24 | ||
| 2e28_A | 587 | Crystal Structure Analysis Of Pyruvate Kinase From | 3e-23 | ||
| 4drs_A | 526 | Crystal Structure Of Cryptosporidium Parvum Pyruvat | 9e-23 | ||
| 3ma8_A | 534 | Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F | 1e-22 | ||
| 1pky_A | 470 | Pyruvate Kinase From E. Coli In The T-State Length | 5e-22 | ||
| 1e0u_A | 470 | Structure R271l Mutant Of E. Coli Pyruvate Kinase L | 1e-21 | ||
| 3khd_A | 520 | Crystal Structure Of Pff1300w. Length = 520 | 1e-21 | ||
| 1e0t_A | 470 | R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 | 4e-21 | ||
| 1a3w_A | 500 | Pyruvate Kinase From Saccharomyces Cerevisiae Compl | 4e-21 | ||
| 3eoe_A | 511 | Crystal Structure Of Pyruvate Kinase From Toxoplasm | 4e-21 | ||
| 3qv9_A | 499 | Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin | 1e-20 | ||
| 3t05_A | 606 | Crystal Structure Of S. Aureus Pyruvate Kinase Leng | 3e-20 | ||
| 3qtg_A | 461 | Crystal Structure Of Pyruvate Kinase From Pyrobacul | 6e-09 |
| >pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 | Back alignment and structure |
|
| >pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 | Back alignment and structure |
| >pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 | Back alignment and structure |
| >pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 | Back alignment and structure |
| >pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 | Back alignment and structure |
| >pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 | Back alignment and structure |
| >pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 | Back alignment and structure |
| >pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 | Back alignment and structure |
| >pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 | Back alignment and structure |
| >pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 | Back alignment and structure |
| >pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 | Back alignment and structure |
| >pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 | Back alignment and structure |
| >pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 | Back alignment and structure |
| >pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 | Back alignment and structure |
| >pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 | Back alignment and structure |
| >pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 | Back alignment and structure |
| >pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 | Back alignment and structure |
| >pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 | Back alignment and structure |
| >pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 | Back alignment and structure |
| >pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 | Back alignment and structure |
| >pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 | Back alignment and structure |
| >pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 | Back alignment and structure |
| >pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 | Back alignment and structure |
| >pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 | Back alignment and structure |
| >pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 | Back alignment and structure |
| >pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 | Back alignment and structure |
| >pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 | Back alignment and structure |
| >pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 | Back alignment and structure |
| >pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 | Back alignment and structure |
| >pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 | Back alignment and structure |
| >pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 | Back alignment and structure |
| >pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 | Back alignment and structure |
| >pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 | Back alignment and structure |
| >pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 | Back alignment and structure |
| >pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 | Back alignment and structure |
| >pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 | Back alignment and structure |
| >pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 | Back alignment and structure |
| >pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 | Back alignment and structure |
| >pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 5e-52
Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 34/291 (11%)
Query: 328 KGKKIR---FPAAQVVDVPAVEPFIRLRVGDLLTISRDSSCEQDESSEPISSAHRITCSS 384
KG +IR + +V L+ G L I+ D + + +
Sbjct: 134 KGPEIRTGLIKGSGTAEVE-------LKKGATLKIT------LDNAYMEKCDENILWLDY 180
Query: 385 SCLFDSVKPGEPIAFDDGKIWGLIQGASISEIVVSITHAGPRGTKLGSGKSINIPKSNIH 444
+ V+ G I DDG I ++ +V + + G LGS K +N+P + +
Sbjct: 181 KNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGS----LGSKKGVNLPGAAVD 236
Query: 445 FEGLTTKDLMDLEF-VASHADMVGISFVRDSCDIAMLRKELEKRKVQNLGVVLKIETKSG 503
++ KD+ DL+F V DMV SF+R + D+ +RK L ++ +N+ ++ KIE G
Sbjct: 237 LPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG-KNIKIISKIENHEG 295
Query: 504 FERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEEILSICGAAHVPVIWATQV 563
R IL + G+M+ARGDL +E E++ Q+ ++ C A PVI ATQ+
Sbjct: 296 VRRFDEILEASD------GIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQM 349
Query: 564 LESLVKFGVPTRAEITDVASA--RRASCVMLN----KGKHVVEAVSTLDKI 608
LES++K PTRAE +DVA+A A C+ML+ KG + +EAV I
Sbjct: 350 LESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLI 400
|
| >3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 | Back alignment and structure |
|---|
| >1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 | Back alignment and structure |
|---|
| >1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 | Back alignment and structure |
|---|
| >1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 | Back alignment and structure |
|---|
| >1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 | Back alignment and structure |
|---|
| >2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 | Back alignment and structure |
|---|
| >2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 | Back alignment and structure |
|---|
| >3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 | Back alignment and structure |
|---|
| >3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 | Back alignment and structure |
|---|
| >3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 | Back alignment and structure |
|---|
| >3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 | Back alignment and structure |
|---|
| >3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 | Back alignment and structure |
|---|
| >3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 | Back alignment and structure |
|---|
| >3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 | Back alignment and structure |
|---|
| >3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 | Back alignment and structure |
|---|
| >3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 | Back alignment and structure |
|---|
| >3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 | Back alignment and structure |
|---|
| >3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 | Back alignment and structure |
|---|
| >3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 631 | |||
| 4drs_A | 526 | Pyruvate kinase; glycolysis, allosteric EN transfe | 100.0 | |
| 3gr4_A | 550 | Pyruvate kinase isozymes M1/M2; activator, acetyla | 100.0 | |
| 3hqn_D | 499 | Pyruvate kinase, PK; TIM barrel, T-state enzyme, t | 100.0 | |
| 3khd_A | 520 | Pyruvate kinase; malaria, structural genomics, str | 100.0 | |
| 3gg8_A | 511 | Pyruvate kinase; malaria, genomics, proteomics, gl | 100.0 | |
| 3t05_A | 606 | Pyruvate kinase, PK; tetramer, glycolysis, transfe | 100.0 | |
| 3qtg_A | 461 | Pyruvate kinase, PK; TIM barrel, glycolysis, trans | 100.0 | |
| 1e0t_A | 470 | Pyruvate kinase, PK; phosphotransferase, glycolysi | 100.0 | |
| 2e28_A | 587 | Pyruvate kinase, PK; allosteric, transferase; 2.40 | 100.0 | |
| 1a3w_A | 500 | Pyruvate kinase; allosteric regulation, tranferase | 100.0 | |
| 1izc_A | 339 | Macrophomate synthase intermolecular diels-aldera; | 99.59 | |
| 2vws_A | 267 | YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher | 99.55 | |
| 2v5j_A | 287 | 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l | 99.55 | |
| 3qz6_A | 261 | HPCH/HPAI aldolase; structural genomics, PSI-biolo | 99.48 | |
| 1dxe_A | 256 | 2-dehydro-3-deoxy-galactarate aldolase; class II a | 99.46 | |
| 1sgj_A | 284 | Citrate lyase, beta subunit; trimer, TIM barrel, s | 99.42 | |
| 2xz9_A | 324 | Phosphoenolpyruvate-protein kinase (PTS system EI | 98.95 | |
| 3qll_A | 316 | Citrate lyase; beta barrel; 2.45A {Yersinia pestis | 98.78 | |
| 1u5h_A | 273 | CITE; TIM barrel, structural genomics, PSI, protei | 98.71 | |
| 3qqw_A | 332 | Putative citrate lyase; TIM beta/alpha-barrel, str | 98.7 | |
| 2ols_A | 794 | Phosphoenolpyruvate synthase; MC structural genomi | 98.69 | |
| 3r4i_A | 339 | Citrate lyase; TIM beta/alpha-barrel, structural g | 98.64 | |
| 2hwg_A | 575 | Phosphoenolpyruvate-protein phosphotransferase; en | 98.57 | |
| 2wqd_A | 572 | Phosphoenolpyruvate-protein phosphotransferase; ki | 98.5 | |
| 3oyz_A | 433 | Malate synthase; TIM barrel, transferase; HET: ACO | 98.34 | |
| 1vbg_A | 876 | Pyruvate,orthophosphate dikinase; transferase, mai | 97.74 | |
| 1kbl_A | 873 | PPDK, pyruvate phosphate dikinase; transferase, ph | 97.54 | |
| 3cuz_A | 532 | MSA, malate synthase A; TIM barrel, cytoplasm, gly | 97.11 | |
| 3cux_A | 528 | Malate synthase; TIM barrel, glyoxylate bypass, tr | 96.85 | |
| 1p7t_A | 731 | MSG, malate synthase G; TIM barrel, glyoxylate cyc | 96.56 | |
| 3odm_A | 560 | Pepcase, PEPC, phosphoenolpyruvate carboxylase; be | 95.38 | |
| 1h6z_A | 913 | Pyruvate phosphate dikinase; transferase, tropical | 94.79 | |
| 1jqo_A | 970 | Phosphoenolpyruvate carboxylase; beta barrel, carb | 94.45 | |
| 1jqn_A | 883 | Pepcase, PEPC, phosphoenolpyruvate carboxylase; be | 93.16 | |
| 4fxs_A | 496 | Inosine-5'-monophosphate dehydrogenase; structural | 92.51 | |
| 4fo4_A | 366 | Inosine 5'-monophosphate dehydrogenase; structural | 92.33 | |
| 4af0_A | 556 | Inosine-5'-monophosphate dehydrogenase; oxidoreduc | 92.23 | |
| 2x0s_A | 913 | Pyruvate phosphate dikinase; transferase, tropical | 92.08 | |
| 3f4w_A | 211 | Putative hexulose 6 phosphate synthase; humps, mal | 91.42 | |
| 3i65_A | 415 | Dihydroorotate dehydrogenase homolog, mitochondria | 89.8 | |
| 3zwt_A | 367 | Dihydroorotate dehydrogenase (quinone), mitochond; | 89.38 | |
| 3ffs_A | 400 | Inosine-5-monophosphate dehydrogenase; beta-alpha | 88.79 | |
| 4avf_A | 490 | Inosine-5'-monophosphate dehydrogenase; oxidoreduc | 87.45 | |
| 3usb_A | 511 | Inosine-5'-monophosphate dehydrogenase; structural | 87.13 | |
| 3khj_A | 361 | Inosine-5-monophosphate dehydrogenase; enzyme-inhi | 86.88 | |
| 1y0e_A | 223 | Putative N-acetylmannosamine-6-phosphate 2-epimer; | 86.4 | |
| 1gte_A | 1025 | Dihydropyrimidine dehydrogenase; electron transfer | 86.07 | |
| 1f76_A | 336 | Dihydroorotate dehydrogenase; monomer, alpha-beta- | 85.36 | |
| 3igs_A | 232 | N-acetylmannosamine-6-phosphate 2-epimerase 2; ene | 84.92 | |
| 3qja_A | 272 | IGPS, indole-3-glycerol phosphate synthase; struct | 84.41 | |
| 1tv5_A | 443 | Dhodehase, dihydroorotate dehydrogenase homolog, m | 82.97 | |
| 1ydn_A | 295 | Hydroxymethylglutaryl-COA lyase; TIM-barrel protei | 82.74 | |
| 3q58_A | 229 | N-acetylmannosamine-6-phosphate 2-epimerase; TIM b | 82.74 | |
| 3ovp_A | 228 | Ribulose-phosphate 3-epimerase; iron binding, isom | 82.57 | |
| 1jcn_A | 514 | Inosine monophosphate dehydrogenase I; IMPD, IMPDH | 82.24 | |
| 3cqj_A | 295 | L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barre | 81.46 | |
| 3kws_A | 287 | Putative sugar isomerase; structural genomics, joi | 81.24 | |
| 2z6i_A | 332 | Trans-2-enoyl-ACP reductase II; fatty acid synthes | 80.18 | |
| 2c6q_A | 351 | GMP reductase 2; TIM barrel, metal-binding, NADP, | 80.06 |
| >4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-96 Score=809.38 Aligned_cols=342 Identities=29% Similarity=0.469 Sum_probs=308.6
Q ss_pred HhHHhhcCCCCCCCCeEEEEecCCCCChHH-HHHHHHhCCCEEEeecCCCChHHHHHHHHHHHHHHh-hcCCceEEEecC
Q 006783 156 ANKELLLGPLRHNQTNHIMVTVGQEASESE-ISDILKAGASIIRINCAHGNPSIWSEIIRRVKTSSQ-MLEMPCQILMDL 233 (631)
Q Consensus 156 ~~~~~l~G~~~~~R~TkImvTlgp~aa~~~-i~~Li~aGMdvaRINcAHg~~e~w~~mI~~vR~a~~-~~g~~~~IlmDL 233 (631)
.-+..++...-..|+|||||||||++.+.+ |++|+++||||||||||||++++|+++|++||++++ ++|+||+|++||
T Consensus 31 ~~~~~~~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl 110 (526)
T 4drs_A 31 KICSPLADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDT 110 (526)
T ss_dssp HC---------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred hhhcccccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 334555555667899999999999999999 999999999999999999999999999999999976 689999999999
Q ss_pred CCCeeeeeccCCCCceeccCCCCCCCCccccCcccccccCCCCCCCCCCCCCceeeccchhhhhhccCCCEEEEeccccc
Q 006783 234 AGPKLRTGNLKPGPCIIKISPKKNATGNVILPSQVWLSHKDAGPPPSHLSPDAVLFIDDKKFLSELQVGHILKFSDAREC 313 (631)
Q Consensus 234 ~GPKIRtG~i~~gp~v~~~~p~rd~~G~v~~pa~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~Gd~v~l~d~r~~ 313 (631)
+|||||||.++++.. ..|++||.|+|+...
T Consensus 111 ~GPkIR~g~~~~~~~------------------------------------------------i~L~~G~~v~lt~~~-- 140 (526)
T 4drs_A 111 KGPEIRTGMLEGGKP------------------------------------------------IELKAGQTLKITTDY-- 140 (526)
T ss_dssp CCSCCBBCCBSTTCC------------------------------------------------EECCTTSEEEEESCC--
T ss_pred CCCeeEEEecCCCCe------------------------------------------------EEecCCCEEEEEeCC--
Confidence 999999999976532 147888888886310
Q ss_pred cchhhhccCccccccccccccCCcccccCCCCccceecccCceEEeccCCCcccCCCCCCCCCccEEeeCchhhhcccCC
Q 006783 314 SRTAYVQSGTELHRKGKKIRFPAAQVVDVPAVEPFIRLRVGDLLTISRDSSCEQDESSEPISSAHRITCSSSCLFDSVKP 393 (631)
Q Consensus 314 ~~~~y~~~gt~~~~~g~~~~~~~~~~~~~p~~~~~i~l~~Gd~l~lt~~~~~~~~~~~~~~~~~~~I~ct~p~l~~~v~~ 393 (631)
.. .++...|+|+|++++++|++
T Consensus 141 --------------------------------------------------~~--------~g~~~~i~v~y~~l~~~v~~ 162 (526)
T 4drs_A 141 --------------------------------------------------SM--------LGNSECISCSYSLLPKSVQI 162 (526)
T ss_dssp --------------------------------------------------SS--------CBCSSEEEBSCTTSTTTCCT
T ss_pred --------------------------------------------------cc--------CCCcceeeecchhhHHHhcC
Confidence 00 01246899999999999999
Q ss_pred CCcEEEeCCeEEEEEEEEeCCEEEEEEEecCCCCceecCCceeecCCCcccCCCCChhcHHh-HHHHHh-cCCEEEEecc
Q 006783 394 GEPIAFDDGKIWGLIQGASISEIVVSITHAGPRGTKLGSGKSINIPKSNIHFEGLTTKDLMD-LEFVAS-HADMVGISFV 471 (631)
Q Consensus 394 Gd~I~iDDGkI~~~V~~v~~~~i~~~V~~a~~~Gg~L~s~KGINlP~~~l~lp~LTekD~~d-l~f~~~-~~D~V~~SFV 471 (631)
||+||+|||+|.++|++++++.+.|+|. +||.|+++||||||++.+++|+||+||.+| |+|+++ ++|||++|||
T Consensus 163 Gd~IlidDG~i~l~V~~v~~~~i~~~V~----~gG~L~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFV 238 (526)
T 4drs_A 163 GSTVLIADGSLSTQVLEIGDDFIVCKVL----NSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFV 238 (526)
T ss_dssp TCEEEETTTTEEEEEEEECSSEEEEECC----SCCEECSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTC
T ss_pred CCEEEEeCCCceEEEEEEeCCeEEEEec----cCccccccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeeccc
Confidence 9999999999999999999999999986 799999999999999999999999999998 689998 6999999999
Q ss_pred CChhHHHHHHHHHHHhCC------CCceEEEeecChhhhcchHHHHHHhhcCCCCcEEEEecCCcccccChhhHHHHHHH
Q 006783 472 RDSCDIAMLRKELEKRKV------QNLGVVLKIETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEE 545 (631)
Q Consensus 472 ~sa~Dv~~lr~~L~~~~~------~~~~IiaKIEt~~av~NL~eIl~~a~~~~~~DGImIaRGDL~veig~e~l~~~Qk~ 545 (631)
|+++||.++|++|.+.|. .++.||||||+++|++||++|+.++ |||||||||||+|+|+|+||.+||+
T Consensus 239 r~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~s------DgIMVARGDLgvEip~e~vp~~QK~ 312 (526)
T 4drs_A 239 QNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSES------DGIMVARGDLGMEIPPEKIFVAQKC 312 (526)
T ss_dssp CSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHS------SEEEEECTTHHHHSCGGGHHHHHHH
T ss_pred CchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhhc------cEEEEECCcccccCCHHHHHHHHHH
Confidence 999999999999998763 3689999999999999999999987 9999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEechhhhhhhCCCCChhhHHhhhhc--cccCccccc----CCccHHHHHHHHHHHHHHHhhc
Q 006783 546 ILSICGAAHVPVIWATQVLESLVKFGVPTRAEITDVASA--RRASCVMLN----KGKHVVEAVSTLDKILHINTAQ 615 (631)
Q Consensus 546 Ii~~c~aagkPvi~ATQvLESM~~~~~PtRAEvtDva~a--~gaD~vmLs----kG~ypveAV~~L~~Il~r~e~~ 615 (631)
|+++|+++||||||||||||||++||+|||||++||||| +|+|||||| +|+||+|||++|++||+++|.+
T Consensus 313 II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~ 388 (526)
T 4drs_A 313 MISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETC 388 (526)
T ss_dssp HHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999 799999999 9999999999999999999975
|
| >3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... | Back alignment and structure |
|---|
| >3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* | Back alignment and structure |
|---|
| >3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
| >3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A | Back alignment and structure |
|---|
| >3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* | Back alignment and structure |
|---|
| >3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
| >1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A | Back alignment and structure |
|---|
| >2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A | Back alignment and structure |
|---|
| >1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 | Back alignment and structure |
|---|
| >2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A | Back alignment and structure |
|---|
| >2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A | Back alignment and structure |
|---|
| >3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 | Back alignment and structure |
|---|
| >1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A | Back alignment and structure |
|---|
| >1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 | Back alignment and structure |
|---|
| >2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* | Back alignment and structure |
|---|
| >3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} | Back alignment and structure |
|---|
| >1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A | Back alignment and structure |
|---|
| >3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} | Back alignment and structure |
|---|
| >3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} | Back alignment and structure |
|---|
| >2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A | Back alignment and structure |
|---|
| >2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A | Back alignment and structure |
|---|
| >3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A | Back alignment and structure |
|---|
| >1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* | Back alignment and structure |
|---|
| >1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A | Back alignment and structure |
|---|
| >3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* | Back alignment and structure |
|---|
| >3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
| >1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A | Back alignment and structure |
|---|
| >3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} | Back alignment and structure |
|---|
| >1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A | Back alignment and structure |
|---|
| >1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 | Back alignment and structure |
|---|
| >1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A | Back alignment and structure |
|---|
| >4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} | Back alignment and structure |
|---|
| >4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A | Back alignment and structure |
|---|
| >4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* | Back alignment and structure |
|---|
| >2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 | Back alignment and structure |
|---|
| >3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* | Back alignment and structure |
|---|
| >3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... | Back alignment and structure |
|---|
| >3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} | Back alignment and structure |
|---|
| >4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* | Back alignment and structure |
|---|
| >3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} | Back alignment and structure |
|---|
| >1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 | Back alignment and structure |
|---|
| >1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* | Back alignment and structure |
|---|
| >1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 | Back alignment and structure |
|---|
| >3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 | Back alignment and structure |
|---|
| >3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* | Back alignment and structure |
|---|
| >1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 | Back alignment and structure |
|---|
| >1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} | Back alignment and structure |
|---|
| >3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A | Back alignment and structure |
|---|
| >1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* | Back alignment and structure |
|---|
| >3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A | Back alignment and structure |
|---|
| >3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* | Back alignment and structure |
|---|
| >2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 631 | ||||
| d1pkla2 | 258 | c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter | 2e-32 | |
| d1pkla2 | 258 | c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter | 2e-08 | |
| d1a3xa2 | 265 | c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter | 6e-29 | |
| d1a3xa2 | 265 | c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter | 5e-07 | |
| d1e0ta2 | 246 | c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter | 8e-29 | |
| d1e0ta2 | 246 | c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter | 7e-07 | |
| d2g50a2 | 282 | c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t | 2e-25 | |
| d2g50a2 | 282 | c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t | 7e-05 | |
| d2g50a1 | 102 | b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit | 5e-09 | |
| d1e0ta1 | 98 | b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escheric | 5e-08 | |
| d2vgba1 | 102 | b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human ( | 1e-07 | |
| d1a3xa1 | 101 | b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's | 2e-06 | |
| d1pkla1 | 99 | b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishman | 3e-05 |
| >d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate kinase domain: Pyruvate kinase, N-terminal domain species: Leishmania mexicana [TaxId: 5665]
Score = 123 bits (311), Expect = 2e-32
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 14/184 (7%)
Query: 433 GKSINIPKSNIHFEGLTTKDLMDLEFVASH-ADMVGISFVRDSCDIAMLRKELEKRKVQN 491
G +I I ++ KD +DL+F DM+ SF+R + + +RK L + ++
Sbjct: 75 GVNIAIALDTKGPPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKG-RD 133
Query: 492 LGVVLKIETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEEILSICG 551
+ ++ KIE G + + I+ E+ G+M+ARGDL VE E++ Q+ ++S C
Sbjct: 134 IMIICKIENHQGVQNIDSIIEESD------GIMVARGDLGVEIPAEKVVVAQKILISKCN 187
Query: 552 AAHVPVIWATQVLESLVKFGVPTRAEITDVASA--RRASCVMLN----KGKHVVEAVSTL 605
A PVI ATQ+LES+ PTRAE++DVA+A A CVML+ KGK+ E V +
Sbjct: 188 VAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYM 247
Query: 606 DKIL 609
+I
Sbjct: 248 ARIC 251
|
| >d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 | Back information, alignment and structure |
|---|
| >d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 | Back information, alignment and structure |
|---|
| >d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 | Back information, alignment and structure |
|---|
| >d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 | Back information, alignment and structure |
|---|
| >d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 | Back information, alignment and structure |
|---|
| >d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 | Back information, alignment and structure |
|---|
| >d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 | Back information, alignment and structure |
|---|
| >d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 | Back information, alignment and structure |
|---|
| >d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Length = 98 | Back information, alignment and structure |
|---|
| >d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 | Back information, alignment and structure |
|---|
| >d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Length = 99 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 631 | |||
| d1e0ta2 | 246 | Pyruvate kinase, N-terminal domain {Escherichia co | 100.0 | |
| d1pkla2 | 258 | Pyruvate kinase, N-terminal domain {Leishmania mex | 100.0 | |
| d1a3xa2 | 265 | Pyruvate kinase, N-terminal domain {Baker's yeast | 100.0 | |
| d2g50a2 | 282 | Pyruvate kinase, N-terminal domain {Rabbit (Orycto | 100.0 | |
| d2vgba1 | 102 | Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: | 99.8 | |
| d2g50a1 | 102 | Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu | 99.79 | |
| d1e0ta1 | 98 | Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 | 99.78 | |
| d1a3xa1 | 101 | Pyruvate kinase (PK) {Baker's yeast (Saccharomyces | 99.76 | |
| d1pkla1 | 99 | Pyruvate kinase (PK) {Leishmania mexicana [TaxId: | 99.76 | |
| d1dxea_ | 253 | 2-dehydro-3-deoxy-galactarate aldolase {Escherichi | 99.47 | |
| d1izca_ | 299 | Macrophomate synthase {Macrophoma commelinae [TaxI | 99.35 | |
| d1sgja_ | 231 | Citrate lyase, beta subunit {Deinococcus radiodura | 98.41 | |
| d1u5ha_ | 223 | Citrate lyase, beta subunit {Mycobacterium tubercu | 98.06 | |
| d1kbla1 | 364 | Pyruvate phosphate dikinase, C-terminal domain {Cl | 95.81 | |
| d1vbga1 | 356 | Pyruvate phosphate dikinase, C-terminal domain {Ma | 95.21 | |
| d1h6za1 | 366 | Pyruvate phosphate dikinase, C-terminal domain {Tr | 92.89 | |
| d1zfja1 | 365 | Inosine monophosphate dehydrogenase (IMPDH) {Strep | 92.86 | |
| d1jr1a1 | 378 | Inosine monophosphate dehydrogenase (IMPDH) {Chine | 92.76 | |
| d1vrda1 | 330 | Inosine monophosphate dehydrogenase (IMPDH) {Therm | 92.34 | |
| d1eepa_ | 388 | Inosine monophosphate dehydrogenase (IMPDH) {Lyme | 91.38 | |
| d1gtea2 | 312 | Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su | 88.36 | |
| d2cu0a1 | 368 | Inosine monophosphate dehydrogenase (IMPDH) {Pyroc | 83.93 | |
| d1jqna_ | 880 | Phosphoenolpyruvate carboxylase {Escherichia coli | 83.03 | |
| d1jqoa_ | 936 | Phosphoenolpyruvate carboxylase {Escherichia coli | 82.41 | |
| d1y0ea_ | 222 | Putative N-acetylmannosamine-6-phosphate 2-epimera | 82.37 | |
| d1yxya1 | 230 | Putative N-acetylmannosamine-6-phosphate 2-epimera | 80.59 |
| >d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate kinase domain: Pyruvate kinase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5e-70 Score=549.97 Aligned_cols=232 Identities=33% Similarity=0.488 Sum_probs=209.7
Q ss_pred CCCeEEEEecCCCCChHH-HHHHHHhCCCEEEeecCCCChHHHHHHHHHHHHHHhhcCCceEEEecCCCCeeeeeccCCC
Q 006783 168 NQTNHIMVTVGQEASESE-ISDILKAGASIIRINCAHGNPSIWSEIIRRVKTSSQMLEMPCQILMDLAGPKLRTGNLKPG 246 (631)
Q Consensus 168 ~R~TkImvTlgp~aa~~~-i~~Li~aGMdvaRINcAHg~~e~w~~mI~~vR~a~~~~g~~~~IlmDL~GPKIRtG~i~~g 246 (631)
.|+|||+|||||++.+.+ |++|+++||||||||||||++++|+++|++||++++++|+++.|++||+||
T Consensus 1 mrkTKIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~~~~~~i~~ir~~~~~~~~~~~I~~Dl~gp---------- 70 (246)
T d1e0ta2 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGP---------- 70 (246)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCC----------
T ss_pred CCCCeEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCCccccccccc----------
Confidence 489999999999999999 999999999999999999999999999999999999999999999987553
Q ss_pred CceeccCCCCCCCCccccCcccccccCCCCCCCCCCCCCceeeccchhhhhhccCCCEEEEeccccccchhhhccCcccc
Q 006783 247 PCIIKISPKKNATGNVILPSQVWLSHKDAGPPPSHLSPDAVLFIDDKKFLSELQVGHILKFSDARECSRTAYVQSGTELH 326 (631)
Q Consensus 247 p~v~~~~p~rd~~G~v~~pa~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~Gd~v~l~d~r~~~~~~y~~~gt~~~ 326 (631)
T Consensus 71 -------------------------------------------------------------------------------- 70 (246)
T d1e0ta2 71 -------------------------------------------------------------------------------- 70 (246)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCcccccCCCCccceecccCceEEeccCCCcccCCCCCCCCCccEEeeCchhhhcccCCCCcEEEeCCeEEE
Q 006783 327 RKGKKIRFPAAQVVDVPAVEPFIRLRVGDLLTISRDSSCEQDESSEPISSAHRITCSSSCLFDSVKPGEPIAFDDGKIWG 406 (631)
Q Consensus 327 ~~g~~~~~~~~~~~~~p~~~~~i~l~~Gd~l~lt~~~~~~~~~~~~~~~~~~~I~ct~p~l~~~v~~Gd~I~iDDGkI~~ 406 (631)
T Consensus 71 -------------------------------------------------------------------------------- 70 (246)
T d1e0ta2 71 -------------------------------------------------------------------------------- 70 (246)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEeCCEEEEEEEecCCCCceecCCceeecCCCcccCCCCChhcHHhHHHHHh-cCCEEEEeccCChhHHHHHHHHHH
Q 006783 407 LIQGASISEIVVSITHAGPRGTKLGSGKSINIPKSNIHFEGLTTKDLMDLEFVAS-HADMVGISFVRDSCDIAMLRKELE 485 (631)
Q Consensus 407 ~V~~v~~~~i~~~V~~a~~~Gg~L~s~KGINlP~~~l~lp~LTekD~~dl~f~~~-~~D~V~~SFV~sa~Dv~~lr~~L~ 485 (631)
.||+||.++++|+++ ++|||++|||++++||..+|+++.
T Consensus 71 ----------------------------------------~ltekD~~~i~~a~~~~vD~ialSFVr~~~Dv~~~r~~l~ 110 (246)
T d1e0ta2 71 ----------------------------------------ALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLK 110 (246)
T ss_dssp ----------------------------------------SSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCcchhhhHHHHcCCCEEEEcCCCCHHHHHHHHHHHH
Confidence 138999999999998 699999999999999999999999
Q ss_pred HhCCCCceEEEeecChhhhcchHHHHHHhhcCCCCcEEEEecCCcccccChhhHHHHHHHHHHHHHhcCCCEEEEechhh
Q 006783 486 KRKVQNLGVVLKIETKSGFERLPHILLEAMKSSNPLGVMIARGDLAVECGWERLADMQEEILSICGAAHVPVIWATQVLE 565 (631)
Q Consensus 486 ~~~~~~~~IiaKIEt~~av~NL~eIl~~a~~~~~~DGImIaRGDL~veig~e~l~~~Qk~Ii~~c~aagkPvi~ATQvLE 565 (631)
+.+..++.|||||||++|++||++|+.++ |||||||||||+|+|+++||.+|++|++.|+++||||||||||||
T Consensus 111 ~~~~~~~~iiaKIE~~~al~nldeIi~~s------DgImIaRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq~Le 184 (246)
T d1e0ta2 111 AHGGENIHIISKIENQEGLNNFDEILEAS------DGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLD 184 (246)
T ss_dssp TTTCTTCEEEEEECSHHHHHTHHHHHHHS------SEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---
T ss_pred HhCCCCceEEEEecchhhhhchHHHHhhc------ceEEEEccchhhhCCHHHHHHHHHHHHHHHHHhCCCEEEehhhhh
Confidence 88767899999999999999999999987 999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCChhhHHhhhhc--cccCccccc----CCccHHHHHHHHHHHHHHHhhc
Q 006783 566 SLVKFGVPTRAEITDVASA--RRASCVMLN----KGKHVVEAVSTLDKILHINTAQ 615 (631)
Q Consensus 566 SM~~~~~PtRAEvtDva~a--~gaD~vmLs----kG~ypveAV~~L~~Il~r~e~~ 615 (631)
||+++|.|||||++|++|| +|+|||||| .|+||++||++|++|++++|.+
T Consensus 185 SM~~~p~PTRAEv~Dv~nav~dG~D~vmLs~ETa~G~~P~~~v~~l~~i~~~~E~~ 240 (246)
T d1e0ta2 185 SMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRV 240 (246)
T ss_dssp ------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTT
T ss_pred hhhcCCCCchHHHHHHHHHHHhCCcEEEEccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 699999999 9999999999999999999976
|
| >d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} | Back information, alignment and structure |
|---|
| >d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} | Back information, alignment and structure |
|---|
| >d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} | Back information, alignment and structure |
|---|
| >d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
| >d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
| >d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
| >d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|