Citrus Sinensis ID: 006790
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| DNA repair helicase UVH6 | Putative ATP-dependent 5'-3' DNA helicase involved in nucleotide excision repair (NER) of UV-damaged DNA. May open DNA around the damage. Essential during plant growth. May negatively regulate a common response program mediated by UV damage and heat stress, that leads to tissue death and reduced chloroplast function. | confident | Q8W4M7 |
| DNA repair helicase rad15 | ATP-dependent DNA helicase involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents. Necessary for excision of pyrimidine dimers. Also unwinds DNA/RNA duplexes. Plays an essential role in the cell viability. | probable | P26659 |
| TFIIH basal transcription factor complex helicase XPD subunit | ATP-dependent 5'-3' DNA helicase, component of the core-TFIIH basal transcription factor. Involved in nucleotide excision repair (NER) of DNA by opening DNA around the damage, and in RNA transcription by RNA polymerase II by anchoring the CDK-activating kinase (CAK) complex, composed of CDK7, cyclin H and MAT1, to the core-TFIIH complex. Involved in the regulation of vitamin-D receptor activity. As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation. Might have a role in aging process and could play a causative role in the generation of skin cancers. | probable | P18074 |
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 3.-.-.- | Hydrolases. | probable | |||||||||
| 3.6.-.- | Acting on acid anhydrides. | probable | |||||||||
| 3.6.4.- | Acting on acid anhydrides; involved in cellular and subcellular movement. | probable | |||||||||
| 3.6.4.12 | DNA helicase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 4A15, chain A Confidence level:very confident Coverage over the Query: 18-344,355-363,375-631 View the alignment between query and template View the model in PyMOL |
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Template: 3CRV, chain A Confidence level:very confident Coverage over the Query: 13-135,154-269,283-344,359-370,392-551,563-631 View the alignment between query and template View the model in PyMOL |
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Template: 2VSF, chain A Confidence level:probable Coverage over the Query: 40-290,305-364,385-393,412-625 View the alignment between query and template View the model in PyMOL |