Citrus Sinensis ID: 006816

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630
MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENKPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLLSE
ccHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccEEEccccHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHccHHHHHHHHHHccccccEEEEEEcccccccccccccccccHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccCECcHHHHHHHHHHHHHHHccccccccccEEcccccccHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHccccEEEEcccccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEccccHHHHHHccHHHHHcccccccccEEEECccccccccccccccccEEECccccccccHHHHHHHccccHHHHHHHHHHHHcc
MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENKPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLLS*
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MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENKPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLLSE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transketolase-1, chloroplastic Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively (By similarity). Could act as a stress sensor involved in adaptation process.probableQ8RWV0
Transketolase probableQ8YRU9
Transketolase 2 probableQ7MDD4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.2.-.-Transferring aldehyde or ketone residues.probable
2.2.1.-15-hydroxyicosatetraenoate dehydrogenase.probable
2.2.1.1Transketolase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ITZ, chain A
Confidence level:very confident
Coverage over the Query: 2-626
View the alignment between query and template
View the model in PyMOL