Citrus Sinensis ID: 006816

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENKPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLLSE

ccHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccEEEccccHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHcHHHHHHHHHHccccccEEEEEEcccccccccccccccccHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHccccccccccEEcccccccHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHccccEEEEcccccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEccccHHHHHHccHHHHHcccccccccEEEEEccccccccccccccccEEEEccccccccHHHHHHHccccHHHHHHHHHHHHcc

cHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEccHHHHHHHHHHHHHHccccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcEccEccccccEEEEEcHHHHHcHHHHHHHHHHHHHccccEEEEEEEccEEccEEHHHcccccHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEHHHHHccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHccccccccccEcHHHHHHHHHHHHccccccEEEEEcccHHHHHccccccccEcccccccccEccccccHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHccccEEEEEcccHHHcccccccccccHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccEEEEEccccEccccccccHHHHHcccEEEEEccccccccEEEEEcHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHccHHHHHHHcccccccEEEEccccccccHHHHccccEEEccccccccccHHHHHHHccccHHHHHHHHcccccc

MLIVDAVQnakaghpgmaLGMAEVGYVLYRHAMkynprnhkwfnrdrfVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCkmgsrtpghpenvvtegievttgplgqgVANAVGLALAEAHLAarfnkpdavvvdhrtycimsdgcameGISHEAAALAAHWKLNKLTliyddnhntidgptslVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRErvnwvdrdqfhvipmvyreMQIQTDHGERLEKEWCSKVYnyrskyphegaELDLLlnggllpgwenalpkwstsdpldatrgySEKCLNQLAKVLpgliggsadlassnkayllgyhdfsqpdspwgrnirygVREHAMAGIsngvalhggglipfAATFLIFSDYMKNSIRLSALSHAGVIYILthdsiglgedgpthqpveqlaglravprllafrpadgnetagsYRVAIANRDVPSVIALSRQKIAAnlegtsadeverggyivsdnssenkpeiILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRlfdrqpaeykekvlpsrvVKRVSveagssvgwreyvgvegkvigveefgasgayldtFKKYGFTIDNVTKVARSLLSE

MLIVDAVQnakaghpgmaLGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMGsrtpghpenvvTEGIEVTTGPLGQGVANAVGLALAEAHLAArfnkpdavvVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAAnetkkptfirvkkmrervnwvdrdqfhvipmVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHdfsqpdspWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAanlegtsadeverggyivsdnssenkpEIILIGTGTELSLCEGTAktlrqegrrvrvVSLVCwrlfdrqpaeykekvlpsrvvkrvsveagssvgwreyvgvEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLLSE

MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEgaeldlllnggllpgWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENKPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWReyvgvegkvigveefgASGAYLDTFKKYGFTIDNVTKVARSLLSE

*************HPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLCKMG*******ENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDG*THQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANL************YI**********EIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVA******

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		630	2.2.26 [Sep-21-2011]
Q43848		741	Transketolase, chloroplas	N/A	no	0.990	0.842	0.541	0.0
Q7SIC9		675	Transketolase, chloroplas	N/A	no	0.990	0.924	0.532	0.0
Q8RWV0		741	Transketolase-1, chloropl	yes	no	0.992	0.843	0.534	0.0
F4IW47		741	Transketolase-2, chloropl	no	no	0.992	0.843	0.528	0.0
O20250		741	Transketolase, chloroplas	N/A	no	0.990	0.842	0.519	0.0
Q42675		679	Transketolase 10 OS=Crate	N/A	no	0.990	0.918	0.525	0.0
Q8YRU9		670	Transketolase OS=Nostoc s	yes	no	0.985	0.926	0.512	0.0
Q42677		676	Transketolase 7 OS=Crater	N/A	no	0.990	0.923	0.503	0.0
O67642		689	Transketolase OS=Aquifex	yes	no	0.966	0.883	0.445	1e-155
Q42676		519	Transketolase, chloroplas	N/A	no	0.780	0.947	0.501	1e-148

>sp\|Q43848\|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1	Back alignment and function desciption

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/654 (54%), Positives = 446/654 (68%), Gaps = 30/654 (4%)

Query: 1   MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQY 60
            L +DAV+ A +GHPG+ +G A +G++LY   MKYNP+N  WFNRDRFVLSAGHGC+LQY
Sbjct: 90  FLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQY 149

Query: 61  VCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEA 120
             LHLAG+ SVQ +DLK   + GSR PGHPEN  T G+EVTTGPLGQG+ANAVGLA+AE 
Sbjct: 150 ALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLGQGIANAVGLAVAEK 209

Query: 121 HLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDG 180
           HLAARFNKPDA +VDH TY I+ DGC MEGIS+E  +LA HW L KL   YDDNH +IDG
Sbjct: 210 HLAARFNKPDAEIVDHYTYVILGDGCQMEGISNEVCSLAGHWGLGKLIAFYDDNHISIDG 269

Query: 181 PTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRV------- 233
            T +  +ED+SARF+SLGW+ I V+N +      + A+  A     KPT I+V       
Sbjct: 270 DTEIAFTEDVSARFESLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTMIKVTTTIGFG 329

Query: 234 --------------------KKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWC 273
                               +  R  + W   + FHV   V       T  G  LE EW 
Sbjct: 330 SPNKANSYSVHGSGLGAKEVEATRNNLGW-PYEPFHVPEDVKSHWSRHTPEGAALETEWN 388

Query: 274 SKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVL 333
           +K   Y  KY  E A+L  ++ G L  GWE ALP ++   P DATR  S++ LN LAKVL
Sbjct: 389 AKFAEYEKKYAEEAADLKSIITGELPAGWEKALPTYTPESPADATRNLSQQNLNALAKVL 448

Query: 334 PGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIP 393
           PG +GGSADLASSN   L  + DF Q ++P  RN+R+GVREH M  I NG+ALH  GLIP
Sbjct: 449 PGFLGGSADLASSNMTLLKMFGDF-QKNTPEERNLRFGVREHGMGAICNGIALHSLGLIP 507

Query: 394 FAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLL 453
           + ATF +F+DYM+ ++R+SALS AGVIY++THDSIGLGEDGPTHQP+E LA  RA+P +L
Sbjct: 508 YCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNIL 567

Query: 454 AFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSEN 513
            FRPADGNETAG+Y+VA+  R  PS++ALSRQK+   L GTS +   +GGYIVSDNSS N
Sbjct: 568 MFRPADGNETAGAYKVAVLKRKTPSILALSRQKL-PQLAGTSIEGAAKGGYIVSDNSSGN 626

Query: 514 KPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKR 573
           KP++ILIGTG+EL +    A+ L++EG+ VRVVS VCW L+D Q AEYKE VLPS V  R
Sbjct: 627 KPDVILIGTGSELEIAVKAAEELKKEGKTVRVVSFVCWELYDEQSAEYKESVLPSSVTAR 686

Query: 574 VSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSL 627
           VS+EAGS+ GW+++VG +GK IG++ FGAS      +K++G T + V   A+ +
Sbjct: 687 VSIEAGSTFGWQKFVGDKGKAIGIDGFGASAPADKIYKEFGITAEAVVAAAKQV 740

Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively.
Solanum tuberosum (taxid: 4113)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 1

>sp\|Q7SIC9\|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1	Back alignment and function description

>sp\|Q8RWV0\|TKTC1_ARATH Transketolase-1, chloroplastic OS=Arabidopsis thaliana GN=TKL-1 PE=1 SV=1	Back alignment and function description

>sp\|F4IW47\|TKTC2_ARATH Transketolase-2, chloroplastic OS=Arabidopsis thaliana GN=TKL-2 PE=1 SV=1	Back alignment and function description

>sp\|O20250\|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1	Back alignment and function description

>sp\|Q42675\|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1	Back alignment and function description

>sp\|Q8YRU9\|TKT_NOSS1 Transketolase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=tkt PE=1 SV=1	Back alignment and function description

>sp\|Q42677\|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1	Back alignment and function description

>sp\|O67642\|TKT_AQUAE Transketolase OS=Aquifex aeolicus (strain VF5) GN=tkt PE=3 SV=1	Back alignment and function description

>sp\|Q42676\|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		630
224109790		656	predicted protein [Populus trichocarpa]	0.998	0.958	0.765	0.0
255581759		789	transketolase, putative [Ricinus communi	0.996	0.795	0.776	0.0
147817785		663	hypothetical protein VITISV_017140 [Viti	0.914	0.868	0.753	0.0
296085998		679	unnamed protein product [Vitis vinifera]	0.958	0.889	0.695	0.0
168049017		665	predicted protein [Physcomitrella patens	0.998	0.945	0.654	0.0
302809139		661	hypothetical protein SELMODRAFT_234975 [	0.998	0.951	0.651	0.0
302806701		659	hypothetical protein SELMODRAFT_268939 [	0.995	0.951	0.652	0.0
326515912		707	predicted protein [Hordeum vulgare subsp	0.990	0.882	0.544	0.0
326506124		707	predicted protein [Hordeum vulgare subsp	0.990	0.882	0.544	0.0
115466224		678	Os06g0133800 [Oryza sativa Japonica Grou	0.990	0.920	0.544	0.0

>gi\|224109790\|ref\|XP_002315311.1\| predicted protein [Populus trichocarpa] gi\|222864351\|gb\|EEF01482.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/656 (76%), Positives = 569/656 (86%), Gaps = 27/656 (4%)

Query: 1   MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQY 60
           ML+VDAVQ+A+AGHPGMALGMA++GY LYRH M+YNPR+ KWFNRDRFVLSAGHGCLLQY
Sbjct: 1   MLVVDAVQSAQAGHPGMALGMADIGYYLYRHVMRYNPRDPKWFNRDRFVLSAGHGCLLQY 60

Query: 61  VCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEA 120
           VCLHLAGF+SVQLEDLKRLCK+GSRTPGHPEN VT+GIEVTTGPLGQGVANAVGLALAEA
Sbjct: 61  VCLHLAGFESVQLEDLKRLCKLGSRTPGHPENTVTDGIEVTTGPLGQGVANAVGLALAEA 120

Query: 121 HLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDG 180
           HLAARFNKPD  +VDHRTYCIM DGCAMEGI+HEAA+LAAHWKL+KLT+IYDDNHNTIDG
Sbjct: 121 HLAARFNKPDCDIVDHRTYCIMGDGCAMEGITHEAASLAAHWKLHKLTMIYDDNHNTIDG 180

Query: 181 PTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVK------ 234
           P SL  SEDISARFK+LGWNTI V+N HD++ SF +AL++A  +T+KPTFIRVK      
Sbjct: 181 PISLAFSEDISARFKALGWNTITVDNTHDDMDSFNDALLSAFGDTEKPTFIRVKTLIGRL 240

Query: 235 --------------------KMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCS 274
                               +MR++V W  R+ FHVIPMVYREMQ+QTDHGE+LEKEW S
Sbjct: 241 SRKEGTSKAHHGTFEEDDVKQMRQKVKWDSREPFHVIPMVYREMQVQTDHGEKLEKEWFS 300

Query: 275 KVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLP 334
           K   +++ YP E AE ++LL+GGL P WE+ LP+WS +DP+DATRGYSEKCLNQL KVLP
Sbjct: 301 KFDYFKTNYPEEAAEFEVLLSGGLPPNWESCLPEWSVTDPVDATRGYSEKCLNQLVKVLP 360

Query: 335 GLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPF 394
           GLIGGSADLASSNK YL G  DF Q  S +GRNIRYGVREHAMAGISNG+ALH  GLIPF
Sbjct: 361 GLIGGSADLASSNKVYLQGSQDF-QHSSFYGRNIRYGVREHAMAGISNGIALHKSGLIPF 419

Query: 395 AATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLA 454
           AATFLIFSDYMKNSIRLSALSHAGVIYI+THDSIGLGEDGPTHQP+EQLAGLRAVPRLL 
Sbjct: 420 AATFLIFSDYMKNSIRLSALSHAGVIYIMTHDSIGLGEDGPTHQPIEQLAGLRAVPRLLV 479

Query: 455 FRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENK 514
           FRPADGNETAG+YR A+ NRD PSVIALSRQK+AANLEGTSA+EVE+GGYI+SDNS ++ 
Sbjct: 480 FRPADGNETAGAYREAMTNRDAPSVIALSRQKVAANLEGTSANEVEKGGYIISDNSGKSL 539

Query: 515 PEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRV 574
           P+IILI TG+EL LCE +AK LR+EGR+VRVVSLVCW+LF+RQP EYKE VLPS V KR+
Sbjct: 540 PDIILISTGSELCLCEESAKMLRKEGRKVRVVSLVCWQLFNRQPKEYKEHVLPSSVSKRI 599

Query: 575 SVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLLSE 630
           SVEAGSS+GW EYVG EG V+GVEEFGASGAYLDTFKK+GFT +NVT+VA+SLLS+
Sbjct: 600 SVEAGSSMGWSEYVGREGIVMGVEEFGASGAYLDTFKKFGFTEENVTRVAKSLLSQ 655

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255581759\|ref\|XP_002531681.1\| transketolase, putative [Ricinus communis] gi\|223528686\|gb\|EEF30700.1\| transketolase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|147817785\|emb\|CAN75585.1\| hypothetical protein VITISV_017140 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296085998\|emb\|CBI31439.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|168049017\|ref\|XP_001776961.1\| predicted protein [Physcomitrella patens subsp. patens] gi\|162671662\|gb\|EDQ58210.1\| predicted protein [Physcomitrella patens subsp. patens]	Back alignment and taxonomy information

>gi\|302809139\|ref\|XP_002986263.1\| hypothetical protein SELMODRAFT_234975 [Selaginella moellendorffii] gi\|300146122\|gb\|EFJ12794.1\| hypothetical protein SELMODRAFT_234975 [Selaginella moellendorffii]	Back alignment and taxonomy information

>gi\|302806701\|ref\|XP_002985082.1\| hypothetical protein SELMODRAFT_268939 [Selaginella moellendorffii] gi\|300147292\|gb\|EFJ13957.1\| hypothetical protein SELMODRAFT_268939 [Selaginella moellendorffii]	Back alignment and taxonomy information

>gi\|326515912\|dbj\|BAJ87979.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

>gi\|326506124\|dbj\|BAJ91301.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

>gi\|115466224\|ref\|NP_001056711.1\| Os06g0133800 [Oryza sativa Japonica Group] gi\|113594751\|dbj\|BAF18625.1\| Os06g0133800, partial [Oryza sativa Japonica Group]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		630
UNIPROTKB\|Q43848		741	Q43848 "Transketolase, chlorop	0.622	0.529	0.508	3.8e-181
TAIR\|locus:2101871		741	AT3G60750 [Arabidopsis thalian	0.620	0.527	0.5	2.7e-180
TAIR\|locus:2050837		741	AT2G45290 [Arabidopsis thalian	0.623	0.530	0.494	6.3e-179
UNIPROTKB\|O20250		741	O20250 "Transketolase, chlorop	0.622	0.529	0.486	8.3e-177
TIGR_CMR\|DET_0644		666	DET_0644 "transketolase" [Deha	0.614	0.581	0.414	5.9e-135
TIGR_CMR\|DET_0678		666	DET_0678 "transketolase" [Deha	0.614	0.581	0.414	5.9e-135
TIGR_CMR\|BA_3744		666	BA_3744 "transketolase" [Bacil	0.617	0.584	0.39	9.7e-133
UNIPROTKB\|G4MRY4		687	MGG_02471 "Transketolase" [Mag	0.607	0.557	0.390	1.2e-132
ASPGD\|ASPL0000053784		684	AN0688 [Emericella nidulans (t	0.606	0.558	0.394	1.2e-132
POMBASE\|SPBC2G5.05		685	SPBC2G5.05 "transketolase (pre	0.584	0.537	0.401	2.4e-127

UNIPROTKB\|Q43848 Q43848 "Transketolase, chloroplastic" [Solanum tuberosum (taxid:4113)]	Back alignment and assigned GO terms

 Score = 1009 (360.2 bits), Expect = 3.8e-181, Sum P(2) = 3.8e-181
 Identities = 201/395 (50%), Positives = 254/395 (64%)

Query:   233 VKKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEXXXXXX 292
             V+  R  + W   + FHV   V       T  G  LE EW +K   Y  KY  E      
Sbjct:   349 VEATRNNLGW-PYEPFHVPEDVKSHWSRHTPEGAALETEWNAKFAEYEKKYAEEAADLKS 407

Query:   293 XXXXXXXXXWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLL 352
                      WE ALP ++   P DATR  S++ LN LAKVLPG +GGSADLASSN   L 
Sbjct:   408 IITGELPAGWEKALPTYTPESPADATRNLSQQNLNALAKVLPGFLGGSADLASSNMTLLK 467

Query:   353 GYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLS 412
              + DF Q ++P  RN+R+GVREH M  I NG+ALH  GLIP+ ATF +F+DYM+ ++R+S
Sbjct:   468 MFGDF-QKNTPEERNLRFGVREHGMGAICNGIALHSLGLIPYCATFFVFTDYMRGAMRIS 526

Query:   413 ALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLLAFRPADGNETAGSYRVAIA 472
             ALS AGVIY++THDSIGLGEDGPTHQP+E LA  RA+P +L FRPADGNETAG+Y+VA+ 
Sbjct:   527 ALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVL 586

Query:   473 NRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSENKPEIILIGTGTELSLCEGT 532
              R  PS++ALSRQK+   L GTS +   +GGYIVSDNSS NKP++ILIGTG+EL +    
Sbjct:   587 KRKTPSILALSRQKLP-QLAGTSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKA 645

Query:   533 AKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWRXXXXXXX 592
             A+ L++EG+ VRVVS VCW L+D Q AEYKE VLPS V  RVS+EAGS+ GW+       
Sbjct:   646 AEELKKEGKTVRVVSFVCWELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKG 705

Query:   593 XXXXXXXXXASGAYLDTFKKYGFTIDNVTKVARSL 627
                      AS      +K++G T + V   A+ +
Sbjct:   706 KAIGIDGFGASAPADKIYKEFGITAEAVVAAAKQV 740

GO:0004802 "transketolase activity" evidence=ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS

TAIR\|locus:2101871 AT3G60750 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2050837 AT2G45290 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|O20250 O20250 "Transketolase, chloroplastic" [Spinacia oleracea (taxid:3562)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0644 DET_0644 "transketolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0678 DET_0678 "transketolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|BA_3744 BA_3744 "transketolase" [Bacillus anthracis str. Ames (taxid:198094)]	Back alignment and assigned GO terms

UNIPROTKB\|G4MRY4 MGG_02471 "Transketolase" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000053784 AN0688 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

POMBASE\|SPBC2G5.05 SPBC2G5.05 "transketolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7MDD4	TKT2_VIBVY	2, ., 2, ., 1, ., 1	0.4175	0.9809	0.9321	yes	no
Q7SIC9	TKTC_MAIZE	2, ., 2, ., 1, ., 1	0.5321	0.9904	0.9244	N/A	no
Q42675	TKTA_CRAPL	2, ., 2, ., 1, ., 1	0.5251	0.9904	0.9189	N/A	no
Q42677	TKT7_CRAPL	2, ., 2, ., 1, ., 1	0.5030	0.9904	0.9230	N/A	no
Q7MHK7	TKT1_VIBVY	2, ., 2, ., 1, ., 1	0.4214	0.9793	0.9292	yes	no
Q12630	TKT1_KLULA	2, ., 2, ., 1, ., 1	0.4070	0.9730	0.9027	yes	no
P99161	TKT_STAAN	2, ., 2, ., 1, ., 1	0.4207	0.9793	0.9320	yes	no
Q87LK8	TKT1_VIBPA	2, ., 2, ., 1, ., 1	0.4227	0.9825	0.9322	yes	no
P59956	TKT_MYCBO	2, ., 2, ., 1, ., 1	0.3945	0.9714	0.8742	yes	no
P57195	TKT_BUCAI	2, ., 2, ., 1, ., 1	0.4130	0.9809	0.9293	yes	no
P34736	TKT_PICST	2, ., 2, ., 1, ., 1	0.4099	0.9555	0.8892	yes	no
P66963	TKT_STAAW	2, ., 2, ., 1, ., 1	0.4207	0.9793	0.9320	yes	no
P66962	TKT_STAAM	2, ., 2, ., 1, ., 1	0.4207	0.9793	0.9320	yes	no
Q87GY4	TKT2_VIBPA	2, ., 2, ., 1, ., 1	0.4199	0.9793	0.9306	yes	no
P57927	TKT1_PASMU	2, ., 2, ., 1, ., 1	0.4154	0.9873	0.9311	yes	no
Q5HG77	TKT_STAAC	2, ., 2, ., 1, ., 1	0.4207	0.9793	0.9320	yes	no
Q8D6H8	TKT2_VIBVU	2, ., 2, ., 1, ., 1	0.4151	0.9825	0.9336	yes	no
P45694	TKT_BACSU	2, ., 2, ., 1, ., 1	0.4227	0.9873	0.9325	yes	no
Q6G9L6	TKT_STAAS	2, ., 2, ., 1, ., 1	0.4207	0.9793	0.9320	yes	no
Q5DZP0	TKT2_VIBF1	2, ., 2, ., 1, ., 1	0.4166	0.9825	0.9336	yes	no
P21725	TKTC_CUPNH	2, ., 2, ., 1, ., 1	0.4107	0.9746	0.9164	yes	no
Q43848	TKTC_SOLTU	2, ., 2, ., 1, ., 1	0.5412	0.9904	0.8421	N/A	no
Q8RWV0	TKTC1_ARATH	2, ., 2, ., 1, ., 1	0.5343	0.9920	0.8434	yes	no
Q9KAD7	TKT_BACHD	2, ., 2, ., 1, ., 1	0.4246	0.9809	0.9279	yes	no
Q8KA26	TKT_BUCAP	2, ., 2, ., 1, ., 1	0.4015	0.9825	0.9308	yes	no
Q9URM2	TKT_SCHPO	2, ., 2, ., 1, ., 1	0.4100	0.9746	0.8963	yes	no
O20250	TKTC_SPIOL	2, ., 2, ., 1, ., 1	0.5198	0.9904	0.8421	N/A	no
Q8YRU9	TKT_NOSS1	2, ., 2, ., 1, ., 1	0.5128	0.9857	0.9268	yes	no
Q5HPJ9	TKT_STAEQ	2, ., 2, ., 1, ., 1	0.4237	0.9793	0.9320	yes	no
P22976	TKT_STRPN	2, ., 2, ., 1, ., 1	0.4092	0.9634	0.9224	yes	no
Q8CPC7	TKT_STAES	2, ., 2, ., 1, ., 1	0.4237	0.9793	0.9320	yes	no
Q9KLW7	TKT2_VIBCH	2, ., 2, ., 1, ., 1	0.4244	0.9809	0.9307	yes	no
O67642	TKT_AQUAE	2, ., 2, ., 1, ., 1	0.4459	0.9666	0.8838	yes	no
Q6GH64	TKT_STAAR	2, ., 2, ., 1, ., 1	0.4207	0.9793	0.9320	yes	no
P23254	TKT1_YEAST	2, ., 2, ., 1, ., 1	0.4272	0.9809	0.9088	yes	no
P57958	TKT2_PASMU	2, ., 2, ., 1, ., 1	0.4169	0.9873	0.9311	yes	no
P43757	TKT_HAEIN	2, ., 2, ., 1, ., 1	0.4220	0.9841	0.9323	yes	no
Q89AY2	TKT_BUCBP	2, ., 2, ., 1, ., 1	0.4060	0.9793	0.9264	yes	no
P46708	TKT_MYCLE	2, ., 2, ., 1, ., 1	0.4014	0.9904	0.8927	yes	no
Q8DCA2	TKT1_VIBVU	2, ., 2, ., 1, ., 1	0.4259	0.9793	0.9292	yes	no
Q9KUP2	TKT1_VIBCH	2, ., 2, ., 1, ., 1	0.4244	0.9809	0.9293	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.2.1.1	0.946
3rd Layer	2.2.1	0.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_X000906	transketolase (EC-2.2.1.1) (656 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.127.161.1	hypothetical protein (339 aa)	•		•		•	•	0.978
	estExt_fgenesh4_pg.C_LG_I2289	SubName- Full=Putative uncharacterized protein; (226 aa)	•			•	•	•	0.967
	estExt_Genewise1_v1.C_1290095	ribulose-phosphate 3-epimerase (EC-5.1.3.1) (286 aa)	•				•	•	0.964
	gw1.VIII.2574.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)	•		•		•	•	0.948
	grail3.0008017101	hypothetical protein (441 aa)	•	•			•	•	0.929
	gw1.29.190.1	ribose-phosphate diphosphokinase (EC-2.7.6.1) (340 aa)					•	•	0.928
	gw1.II.3030.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)					•	•	0.926
	estExt_Genewise1_v1.C_LG_IV0988	hypothetical protein (256 aa)					•	•	0.923
	estExt_fgenesh4_pg.C_LG_I1744	triose-phosphate isomerase (EC-5.3.1.1) (255 aa)					•	•	0.923
	grail3.0049021504	RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (254 aa)					•	•	0.922

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		630
PLN02790		654	PLN02790, PLN02790, transketolase	0.0
COG0021		663	COG0021, TktA, Transketolase [Carbohydrate transpo	0.0
TIGR00232		653	TIGR00232, tktlase_bact, transketolase, bacterial	0.0
PTZ00089		661	PTZ00089, PTZ00089, transketolase; Provisional	0.0
PRK12753		663	PRK12753, PRK12753, transketolase; Reviewed	0.0
PRK12754		663	PRK12754, PRK12754, transketolase; Reviewed	1e-174
PRK05899		586	PRK05899, PRK05899, transketolase; Reviewed	1e-145
PRK05899		586	PRK05899, PRK05899, transketolase; Reviewed	1e-119
pfam00456		333	pfam00456, Transketolase_N, Transketolase, thiamin	1e-115
cd02012		255	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) fami	1e-106
cd07033		156	cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) bin	9e-58
COG3959		243	COG3959, COG3959, Transketolase, N-terminal subuni	1e-57
pfam02779		172	pfam02779, Transket_pyr, Transketolase, pyrimidine	2e-53
smart00861		136	smart00861, Transket_pyr, Transketolase, pyrimidin	2e-35
COG3958		312	COG3958, COG3958, Transketolase, C-terminal subuni	3e-23
cd00568		168	cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP)	2e-10
COG1154		627	COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [	1e-07
TIGR00204		617	TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate syn	1e-06
cd02000		293	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph	8e-06
COG2609		887	COG2609, AceE, Pyruvate dehydrogenase complex, deh	1e-05
cd02017		386	cd02017, TPP_E1_EcPDC_like, Thiamine pyrophosphate	2e-05
PRK05444		580	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate	3e-05
PRK12571		641	PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate	6e-05
PRK05261		785	PRK05261, PRK05261, putative phosphoketolase; Prov	3e-04
cd02002		178	cd02002, TPP_BFDC, Thiamine pyrophosphate (TPP) fa	7e-04
TIGR03182		315	TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E	0.002
COG3957		793	COG3957, COG3957, Phosphoketolase [Carbohydrate tr	0.002
pfam02780		124	pfam02780, Transketolase_C, Transketolase, C-termi	0.002
COG1071		358	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogena	0.003

>gnl\|CDD\|215424 PLN02790, PLN02790, transketolase	Back alignment and domain information

 Score = 1085 bits (2808), Expect = 0.0
 Identities = 381/655 (58%), Positives = 469/655 (71%), Gaps = 30/655 (4%)

Query: 1   MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQY 60
            L +DAV  A +GHPG+ +G A +G+VLY   MKYNP+N  WFNRDRFVLSAGHGC+LQY
Sbjct: 3   FLAIDAVNKANSGHPGLPMGCAPMGHVLYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQY 62

Query: 61  VCLHLAGFQSVQLEDLKRLCKMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEA 120
             LHLAG+ SVQ+EDLK+  + GSRTPGHPEN  T GIEVTTGPLGQG+ANAVGLALAE 
Sbjct: 63  ALLHLAGYDSVQMEDLKQFRQWGSRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEK 122

Query: 121 HLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAAHWKLNKLTLIYDDNHNTIDG 180
           HLAARFNKPD  +VDH TYCI+ DGC MEGIS+EAA+LA HW L KL ++YDDNH +IDG
Sbjct: 123 HLAARFNKPDHKIVDHYTYCILGDGCQMEGISNEAASLAGHWGLGKLIVLYDDNHISIDG 182

Query: 181 PTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRV------- 233
            T +  +ED+  R+++LGW+TI V+N + +    + A+  A   T KPT I+V       
Sbjct: 183 DTEIAFTEDVDKRYEALGWHTIWVKNGNTDYDEIRAAIKEAKAVTDKPTLIKVTTTIGYG 242

Query: 234 --------------------KKMRERVNWVDRDQFHVIPMVYREMQIQTDHGERLEKEWC 273
                                  R+ + W   + FHV   V       T  G  LE EW 
Sbjct: 243 SPNKANSYSVHGAALGEKEVDATRKNLGW-PYEPFHVPEDVKSHWSKHTKEGAALEAEWN 301

Query: 274 SKVYNYRSKYPHEGAELDLLLNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVL 333
           +K   Y+ KYP E AEL  L++G L  GWE ALP ++  DP DATR  S+KCLN LAKVL
Sbjct: 302 AKFAEYKKKYPEEAAELKSLISGELPSGWEKALPTFTPEDPADATRNLSQKCLNALAKVL 361

Query: 334 PGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVREHAMAGISNGVALHGGGLIP 393
           PGLIGGSADLASSN   L  + DF Q D+P  RN+R+GVREH M  I NG+ALH  GLIP
Sbjct: 362 PGLIGGSADLASSNMTLLKDFGDF-QKDTPEERNVRFGVREHGMGAICNGIALHSSGLIP 420

Query: 394 FAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLL 453
           + ATF +F+DYM+ ++RLSALS AGVIY++THDSIGLGEDGPTHQP+E LA LRA+P +L
Sbjct: 421 YCATFFVFTDYMRAAMRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASLRAMPNIL 480

Query: 454 AFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSEN 513
             RPADGNETAG+Y+VA+ NR  P+V+ALSRQK+  NL GTS + VE+GGY++SDNSS N
Sbjct: 481 MLRPADGNETAGAYKVAVTNRKRPTVLALSRQKV-PNLPGTSIEGVEKGGYVISDNSSGN 539

Query: 514 KPEIILIGTGTELSLCEGTAKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKR 573
           KP++ILIGTG+EL +    AK LR+EG++VRVVS+VCW LF+ Q  EYKE VLPS V  R
Sbjct: 540 KPDLILIGTGSELEIAAKAAKELRKEGKKVRVVSMVCWELFEEQSDEYKESVLPSSVTAR 599

Query: 574 VSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKKYGFTIDNVTKVARSLL 628
           VSVEAGS+ GW +YVG +GKVIGV+ FGAS      +K++GFT++NV   A+SLL
Sbjct: 600 VSVEAGSTFGWEKYVGSKGKVIGVDRFGASAPAGILYKEFGFTVENVVAAAKSLL 654

Length = 654

>gnl\|CDD\|223100 COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|232887 TIGR00232, tktlase_bact, transketolase, bacterial and yeast	Back alignment and domain information

>gnl\|CDD\|173383 PTZ00089, PTZ00089, transketolase; Provisional	Back alignment and domain information

>gnl\|CDD\|183723 PRK12753, PRK12753, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183724 PRK12754, PRK12754, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235639 PRK05899, PRK05899, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235639 PRK05899, PRK05899, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|144157 pfam00456, Transketolase_N, Transketolase, thiamine diphosphate binding domain	Back alignment and domain information

>gnl\|CDD\|238970 cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>gnl\|CDD\|132916 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>gnl\|CDD\|226468 COG3959, COG3959, Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|226467 COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238318 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>gnl\|CDD\|224076 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|129308 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>gnl\|CDD\|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>gnl\|CDD\|225329 COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|238975 cd02017, TPP_E1_EcPDC_like, Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>gnl\|CDD\|235470 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|183601 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|235379 PRK05261, PRK05261, putative phosphoketolase; Provisional	Back alignment and domain information

>gnl\|CDD\|238960 cd02002, TPP_BFDC, Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC)	Back alignment and domain information

>gnl\|CDD\|234139 TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>gnl\|CDD\|226466 COG3957, COG3957, Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|217227 pfam02780, Transketolase_C, Transketolase, C-terminal domain	Back alignment and domain information

>gnl\|CDD\|223997 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		630
COG0021		663	TktA Transketolase [Carbohydrate transport and met	100.0
PRK12754		663	transketolase; Reviewed	100.0
PRK12753		663	transketolase; Reviewed	100.0
PLN02790		654	transketolase	100.0
TIGR00232		653	tktlase_bact transketolase, bacterial and yeast. T	100.0
PTZ00089		661	transketolase; Provisional	100.0
KOG0523		632	consensus Transketolase [Carbohydrate transport an	100.0
PRK05899		624	transketolase; Reviewed	100.0
COG1154		627	Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m	100.0
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	100.0
PLN02582		677	1-deoxy-D-xylulose-5-phosphate synthase	100.0
PRK05444		580	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PLN02225		701	1-deoxy-D-xylulose-5-phosphate synthase	100.0
TIGR03186		889	AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S	100.0
PRK13012		896	2-oxoacid dehydrogenase subunit E1; Provisional	100.0
PLN02234		641	1-deoxy-D-xylulose-5-phosphate synthase	100.0
PRK12315		581	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PRK09405		891	aceE pyruvate dehydrogenase subunit E1; Reviewed	100.0
TIGR00759		885	aceE pyruvate dehydrogenase E1 component, homodime	100.0
COG3958		312	Transketolase, C-terminal subunit [Carbohydrate tr	100.0
PF00456		332	Transketolase_N: Transketolase, thiamine diphospha	100.0
PRK05261		785	putative phosphoketolase; Provisional	100.0
COG3959		243	Transketolase, N-terminal subunit [Carbohydrate tr	100.0
COG2609		887	AceE Pyruvate dehydrogenase complex, dehydrogenase	100.0
CHL00144		327	odpB pyruvate dehydrogenase E1 component beta subu	100.0
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	100.0
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	100.0
PRK09212		327	pyruvate dehydrogenase subunit beta; Validated	100.0
PTZ00182		355	3-methyl-2-oxobutanate dehydrogenase; Provisional	100.0
cd02017		386	TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam	100.0
COG0022		324	AcoB Pyruvate/2-oxoglutarate dehydrogenase complex	100.0
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	100.0
PRK09404		924	sucA 2-oxoglutarate dehydrogenase E1 component; Re	100.0
TIGR00239		929	2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon	100.0
cd02007		195	TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s	100.0
KOG0524		359	consensus Pyruvate dehydrogenase E1, beta subunit	100.0
PF13292		270	DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn	100.0
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	100.0
COG3957		793	Phosphoketolase [Carbohydrate transport and metabo	100.0
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	100.0
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	100.0
KOG0525		362	consensus Branched chain alpha-keto acid dehydroge	100.0
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	99.98
cd02011		227	TPP_PK Thiamine pyrophosphate (TPP) family, Phosph	99.94
CHL00149		341	odpA pyruvate dehydrogenase E1 component alpha sub	99.93
cd02000		293	TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP)	99.93
COG1071		358	AcoA Pyruvate/2-oxoglutarate dehydrogenase complex	99.92
PLN02374		433	pyruvate dehydrogenase (acetyl-transferring)	99.92
TIGR03182		315	PDH_E1_alph_y pyruvate dehydrogenase E1 component,	99.92
PF00676		300	E1_dh: Dehydrogenase E1 component; InterPro: IPR00	99.91
TIGR03181		341	PDH_E1_alph_x pyruvate dehydrogenase E1 component,	99.91
PLN02269		362	Pyruvate dehydrogenase E1 component subunit alpha	99.9
cd02016		265	TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami	99.81
PF09364		379	XFP_N: XFP N-terminal domain; InterPro: IPR018970	99.8
KOG0225		394	consensus Pyruvate dehydrogenase E1, alpha subunit	99.8
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	99.78
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	99.77
KOG1182		432	consensus Branched chain alpha-keto acid dehydroge	99.76
cd02008		178	TPP_IOR_alpha Thiamine pyrophosphate (TPP) family,	99.75
cd03371		188	TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp	99.74
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	99.73
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	99.73
PRK06163		202	hypothetical protein; Provisional	99.73
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	99.72
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	99.71
cd02006		202	TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s	99.71
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	99.7
TIGR03846		181	sulfopy_beta sulfopyruvate decarboxylase, beta sub	99.69
cd02002		178	TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC	99.69
cd02005		183	TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family,	99.68
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	99.68
cd03372		179	TPP_ComE Thiamine pyrophosphate (TPP) family, ComE	99.68
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	99.68
PF02780		124	Transketolase_C: Transketolase, C-terminal domain;	99.66
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	99.66
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	99.66
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	99.62
COG0028		550	IlvB Thiamine pyrophosphate-requiring enzymes [ace	99.6
PRK12474		518	hypothetical protein; Provisional	99.59
PRK07586		514	hypothetical protein; Validated	99.57
PRK06154		565	hypothetical protein; Provisional	99.57
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	99.57
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	99.56
TIGR03393		539	indolpyr_decarb indolepyruvate decarboxylase, Erwi	99.56
PRK08266		542	hypothetical protein; Provisional	99.56
PRK09124		574	pyruvate dehydrogenase; Provisional	99.56
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	99.56
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	99.55
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	99.55
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	99.55
PRK07524		535	hypothetical protein; Provisional	99.55
PRK06457		549	pyruvate dehydrogenase; Provisional	99.54
PRK05858		542	hypothetical protein; Provisional	99.54
PRK12270		1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	99.54
PRK06546		578	pyruvate dehydrogenase; Provisional	99.54
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	99.54
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	99.54
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	99.54
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	99.53
PLN02470		585	acetolactate synthase	99.53
PLN02573		578	pyruvate decarboxylase	99.53
PRK08611		576	pyruvate oxidase; Provisional	99.53
PRK07092		530	benzoylformate decarboxylase; Reviewed	99.53
PRK07064		544	hypothetical protein; Provisional	99.53
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	99.53
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	99.53
PRK11269		591	glyoxylate carboligase; Provisional	99.53
PRK06112		578	acetolactate synthase catalytic subunit; Validated	99.52
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	99.52
PRK08617		552	acetolactate synthase; Reviewed	99.52
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	99.52
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	99.52
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	99.52
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	99.52
PRK08199		557	thiamine pyrophosphate protein; Validated	99.52
PRK08322		547	acetolactate synthase; Reviewed	99.52
PRK08273		597	thiamine pyrophosphate protein; Provisional	99.52
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	99.51
PRK08155		564	acetolactate synthase catalytic subunit; Validated	99.5
PRK09628		277	oorB 2-oxoglutarate-acceptor oxidoreductase subuni	99.5
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	99.49
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	99.48
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	99.48
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	99.48
PRK05778		301	2-oxoglutarate ferredoxin oxidoreductase subunit b	99.47
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	99.47
TIGR03394		535	indol_phenyl_DC indolepyruvate/phenylpyruvate deca	99.47
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	99.46
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	99.46
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	99.46
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	99.45
PRK08327		569	acetolactate synthase catalytic subunit; Validated	99.44
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	99.43
PRK11869		280	2-oxoacid ferredoxin oxidoreductase subunit beta;	99.43
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	99.41
PRK07119		352	2-ketoisovalerate ferredoxin reductase; Validated	99.4
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	99.4
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	99.39
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	99.37
COG3961		557	Pyruvate decarboxylase and related thiamine pyroph	99.35
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	99.33
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	99.23
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	99.23
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	99.19
COG3962		617	Acetolactate synthase [Amino acid transport and me	99.16
KOG0451		913	consensus Predicted 2-oxoglutarate dehydrogenase,	99.13
KOG1185		571	consensus Thiamine pyrophosphate-requiring enzyme	99.12
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	99.11
KOG1184		561	consensus Thiamine pyrophosphate-requiring enzyme	99.08
PF03894		179	XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate	99.07
KOG4166		675	consensus Thiamine pyrophosphate-requiring enzyme	99.07
PRK09622		407	porA pyruvate flavodoxin oxidoreductase subunit al	99.07
PRK09627		375	oorA 2-oxoglutarate-acceptor oxidoreductase subuni	98.95
PRK08366		390	vorA 2-ketoisovalerate ferredoxin oxidoreductase s	98.85
PRK08367		394	porA pyruvate ferredoxin oxidoreductase subunit al	98.83
TIGR03710		562	OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s	98.79
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	98.78
COG3960		592	Glyoxylate carboligase [General function predictio	98.59
KOG0450		1017	consensus 2-oxoglutarate dehydrogenase, E1 subunit	98.54
COG0567		906	SucA 2-oxoglutarate dehydrogenase complex, dehydro	98.42
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	98.29
COG1013		294	PorB Pyruvate:ferredoxin oxidoreductase and relate	97.91
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	97.86
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	97.86
COG1165		566	MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car	97.8
COG0674		365	PorA Pyruvate:ferredoxin oxidoreductase and relate	97.57
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	97.14
PF01855		230	POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta	97.06
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	96.85
PRK09193		1165	indolepyruvate ferredoxin oxidoreductase; Validate	96.82
PRK13030		1159	2-oxoacid ferredoxin oxidoreductase; Provisional	96.72
cd07034		160	TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi	96.66
cd03377		365	TPP_PFOR_PNO Thiamine pyrophosphate (TPP family),	96.55
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	96.43
PRK13029		1186	2-oxoacid ferredoxin oxidoreductase; Provisional	96.34
PRK13030		1159	2-oxoacid ferredoxin oxidoreductase; Provisional	95.9
TIGR03845		157	sulfopyru_alph sulfopyruvate decarboxylase, alpha	95.63
PRK09193		1165	indolepyruvate ferredoxin oxidoreductase; Validate	95.44
cd07037		162	TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-	95.27
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	94.58
cd07039		164	TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	94.41
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	94.19
PRK13029		1186	2-oxoacid ferredoxin oxidoreductase; Provisional	93.62
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	93.56
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	93.52
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	93.26
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	93.25
TIGR03845		157	sulfopyru_alph sulfopyruvate decarboxylase, alpha	93.07
cd01460		266	vWA_midasin VWA_Midasin: Midasin is a member of th	93.06
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	93.0
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	92.49
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	92.44
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	92.11
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	91.96
PRK07092		530	benzoylformate decarboxylase; Reviewed	91.95
PRK07064		544	hypothetical protein; Provisional	91.75
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	91.74
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	91.39
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	91.37
PRK05858		542	hypothetical protein; Provisional	91.37
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	91.27
PRK06112		578	acetolactate synthase catalytic subunit; Validated	91.22
PRK07524		535	hypothetical protein; Provisional	91.19
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	91.19
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	91.02
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	91.02
PRK08199		557	thiamine pyrophosphate protein; Validated	90.92
cd02008		178	TPP_IOR_alpha Thiamine pyrophosphate (TPP) family,	90.83
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	90.68
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	90.65
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	90.39
PRK08155		564	acetolactate synthase catalytic subunit; Validated	90.28
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	90.25
cd07038		162	TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom	90.14
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	90.08
PRK06457		549	pyruvate dehydrogenase; Provisional	90.06
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	90.01
PRK08322		547	acetolactate synthase; Reviewed	89.87
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	89.72
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	89.7
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	89.55
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	89.51
PRK08266		542	hypothetical protein; Provisional	89.35
PRK11269		591	glyoxylate carboligase; Provisional	89.25
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	89.13
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	88.85
PF09363		203	XFP_C: XFP C-terminal domain; InterPro: IPR018969	88.84
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	88.83
PRK07586		514	hypothetical protein; Validated	88.81
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	88.48
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	88.37
PRK09124		574	pyruvate dehydrogenase; Provisional	88.36
PRK08617		552	acetolactate synthase; Reviewed	88.36
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	88.32
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	88.07
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	87.94
PRK08611		576	pyruvate oxidase; Provisional	87.89
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	87.85
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	87.82
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	87.8
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	87.62
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	87.56
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	87.49
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	87.49
PLN02470		585	acetolactate synthase	87.36
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	86.97
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	86.96
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	86.78
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	86.78
TIGR00173		432	menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex	86.77
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	86.75
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	86.68
cd02007		195	TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s	86.57
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	86.57
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	86.56
PRK05778		301	2-oxoglutarate ferredoxin oxidoreductase subunit b	86.55
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	85.81
PRK11869		280	2-oxoacid ferredoxin oxidoreductase subunit beta;	85.73
PRK09212		327	pyruvate dehydrogenase subunit beta; Validated	85.54
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	85.3
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	85.26
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	85.08
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	85.06
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	84.86
PLN02573		578	pyruvate decarboxylase	84.52
PRK08327		569	acetolactate synthase catalytic subunit; Validated	84.49
cd07039		164	TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	84.15
PRK06546		578	pyruvate dehydrogenase; Provisional	83.89
cd03371		188	TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp	83.73
TIGR03181		341	PDH_E1_alph_x pyruvate dehydrogenase E1 component,	83.66
TIGR00232		653	tktlase_bact transketolase, bacterial and yeast. T	83.54
PRK05444		580	1-deoxy-D-xylulose-5-phosphate synthase; Provision	83.46
cd07037		162	TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-	83.24
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	82.93
PRK12474		518	hypothetical protein; Provisional	82.73
PRK05899		624	transketolase; Reviewed	82.54
PRK08273		597	thiamine pyrophosphate protein; Provisional	82.21
PTZ00089		661	transketolase; Provisional	82.07
PRK12315		581	1-deoxy-D-xylulose-5-phosphate synthase; Provision	81.99
PLN02582		677	1-deoxy-D-xylulose-5-phosphate synthase	81.98
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	81.45
cd02002		178	TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC	81.2
PRK06163		202	hypothetical protein; Provisional	81.04

>COG0021 TktA Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=1.1e-133  Score=1071.26  Aligned_cols=621  Identities=51%  Similarity=0.858  Sum_probs=585.3

Q ss_pred             ChHHHHHhhcCCCCCCCcccHHHHHHHHHHHhhccCCCCCCCCCCCeEEecCcChhHHHHHHHHHcCCCCCCHHHHhhhh
Q 006816            1 MLIVDAVQNAKAGHPGMALGMAEVGYVLYRHAMKYNPRNHKWFNRDRFVLSAGHGCLLQYVCLHLAGFQSVQLEDLKRLC   80 (630)
Q Consensus         1 ~~~~~~~~~~~~GH~g~~ls~~~~~~~L~~~~~~~d~~~~~~~~~Dr~v~s~gH~~~~~y~~~~l~G~~~~~~~~l~~~r   80 (630)
                      +|++|+|++|+|||||.+||++||.++||.++|++||+||.|+||||||+|+||+|++||++++|+|++ ++.|+|++||
T Consensus        15 ~Ls~davqkAnSGHPG~pmG~A~ia~~L~~~~l~~nP~nP~W~nRDRFVLSaGHgSmllYsllhl~Gy~-ls~edLk~FR   93 (663)
T COG0021          15 FLSMDAVQKANSGHPGAPMGAADIAYVLWTRFLKHNPDNPKWINRDRFVLSAGHGSMLLYSLLHLTGYD-LSLEDLKNFR   93 (663)
T ss_pred             HHHHHHHHhccCCCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCccEEecCCchhHHHHHHHHHccCC-CCHHHHHhhc
Confidence            489999999999999999999999999999999999999999999999999999999999999999998 9999999999


Q ss_pred             hcCCCCCCCCCCCCcCcccccccccchhHHHHHHHHHHHHHHhhhhCCCCCccCCceEEEEEcccccCchhHHHHHHHhH
Q 006816           81 KMGSRTPGHPENVVTEGIEVTTGPLGQGVANAVGLALAEAHLAARFNKPDAVVVDHRTYCIMSDGCAMEGISHEAAALAA  160 (630)
Q Consensus        81 ~~~s~~~g~p~~~~~~~~~~~~G~lG~~l~~AvG~A~a~k~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~eal~~a~  160 (630)
                      |++|++||||++..++|++.+||+||||++.|||||||.|+++++||+||++..|+.+||++||||+|||+++||..+|+
T Consensus        94 Q~~SkTpGHPE~~~t~GVe~TTGPLGQGianAVGmAlAe~~La~~fn~~g~~ivdh~tYvl~GDGclmEGvs~EA~slAG  173 (663)
T COG0021          94 QLGSKTPGHPEYGHTPGVEATTGPLGQGLANAVGMALAEKHLAALFNRPGFDIVDHYTYVLVGDGCLMEGVSHEAASLAG  173 (663)
T ss_pred             cCCCCCCCCCCcCCCCCeEeccCccchhHHHHHHHHHHHHHHHhhhCCCCCccccceEEEEecCchHhcccHHHHHHHHh
Confidence            99999999999989999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCcEEEEEECCCCcccccccccChhcHHHHHHhCCCeEEEEeCCCCCHHHHHHHHHHHHhcCCCcEEEEEeeccccc
Q 006816          161 HWKLNKLTLIYDDNHNTIDGPTSLVLSEDISARFKSLGWNTIMVENIHDNLSSFKEALMAAANETKKPTFIRVKKMRERV  240 (630)
Q Consensus       161 ~~~L~~li~i~~~N~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~dG~~d~~~l~~al~~a~~~~~~P~~i~~~t~k~~~  240 (630)
                      +++|+|||+++|+|+++|++.+...+.+|+.++|+++||+++.++||| |+++|.+|+++|++..++|++|+|+|+-|+ 
T Consensus       174 ~l~L~kLIvlyD~N~IsiDG~~~~~f~ed~~~RfeAyGW~vi~~~DG~-D~e~I~~Ai~~Ak~~~dkPtlI~~kTiIG~-  251 (663)
T COG0021         174 HLKLGKLIVLYDSNDISIDGDTSLSFTEDVAKRFEAYGWNVIRVIDGH-DLEAIDKAIEEAKASTDKPTLIIVKTIIGK-  251 (663)
T ss_pred             hcCCCcEEEEEeCCCceeccCcccccchhHHHHHHhcCCeEEEecCCC-CHHHHHHHHHHHHhcCCCCeEEEEEeeeec-
Confidence            999999999999999999999999999999999999999999777999 999999999999976779999999998876 


Q ss_pred             Cccc---------------------------CCCCCCChHHHHHHHHhhhhchhHHHHHHHHHHhhhhcCCchhHhHHHH
Q 006816          241 NWVD---------------------------RDQFHVIPMVYREMQIQTDHGERLEKEWCSKVYNYRSKYPHEGAELDLL  293 (630)
Q Consensus       241 g~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (630)
                      |...                           .++|++|+++++.|+...+++...+++|++.+.+|++.+|++.+++.+.
T Consensus       252 Gsp~kegt~~~HGapLg~~ev~~~k~~lgw~~~~F~vp~ev~~~~~~~~~~g~~~~~~W~~~~~~y~~~~Pe~~~~~~r~  331 (663)
T COG0021         252 GSPNKEGTHKVHGAPLGEEEVAAAKKALGWEPEPFEVPEEVYAAFRAVEERGAKAEAAWNELFAAYKKKYPELAAEFERR  331 (663)
T ss_pred             CCCCcCCCccccCCCCCHHHHHHHHHHhCCCCCceecCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence            5421                           1237789999999996667888999999999999999999999999999


Q ss_pred             hcCCCCCCccccCCCCCCCCCCchHHHHHHHHHHHHHHhCCCeEEEecCCCCCcccccccccCcCCCCCCCCCccccccc
Q 006816          294 LNGGLLPGWENALPKWSTSDPLDATRGYSEKCLNQLAKVLPGLIGGSADLASSNKAYLLGYHDFSQPDSPWGRNIRYGVR  373 (630)
Q Consensus       294 ~~~~~p~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~iv~~~aD~~~s~~~~~~~~~~f~~~~~~p~R~~~~gIa  373 (630)
                      +++++|..|...+|.++...+..+||++++++|..+.+..|+++..|||++.|+++.+++...| ++++|++|+|.+||+
T Consensus       332 ~~~~~p~~~~~~~~~~~~~~~~~ATR~as~~~L~~l~~~~p~l~GGSADLa~Sn~T~~~~~~~~-~~~~~~gr~i~~GVR  410 (663)
T COG0021         332 LNGELPANWAAFLPKFEANGKSIATRKASGKALNALAKKLPELIGGSADLAPSNLTKISGSGDF-SPENYAGRYIHFGVR  410 (663)
T ss_pred             hcccCchhHHHhhhhhcccccccchHHHHHHHHHHHHhhCccccccCcccccCccccccccCCC-CCCCCCCCeeEEeeH
Confidence            9999999997788888655456899999999999999999999999999999999988877778 667889999999999


Q ss_pred             hHHHHHHHHHHHhcCCCCceEeeehHHHHHhhHHHHHHhcccCCCeEEEEecCCCCCCCCCCCCCChhhhHHhhcCCCcE
Q 006816          374 EHAMAGISNGVALHGGGLIPFAATFLIFSDYMKNSIRLSALSHAGVIYILTHDSIGLGEDGPTHQPVEQLAGLRAVPRLL  453 (630)
Q Consensus       374 E~~~vg~a~GlA~~G~~~~pv~~~~~~F~~~a~dqi~~~a~~~~pv~~v~~~~g~~~g~~G~tHq~~~d~a~l~~iP~l~  453 (630)
                      |++|.++++|||++| |++||..||..|++|++++||++|+|++|+++|.|||++++|+||||||++|+++.||+|||+.
T Consensus       411 Ef~M~AimNGialhG-g~~pyggTFlvFsdY~r~AiRlaALm~l~~~~V~THDSIgvGEDGPTHqPiEqLa~LRaiPN~~  489 (663)
T COG0021         411 EFAMAAIMNGIALHG-GFIPYGGTFLVFSDYARPAVRLAALMGLPVIYVFTHDSIGVGEDGPTHQPVEQLASLRAIPNLS  489 (663)
T ss_pred             HHHHHHHHHhHHHhc-CceeecceehhhHhhhhHHHHHHHhcCCCeEEEEecCceecCCCCCCCCcHHHHHHhhccCCce
Confidence            999999999999999 7999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCChHHHHHHHHHHHHcCCCcEEEEEcCCCcccccCCCcccccccccEEEecCCCCC-CCcEEEEEeCchHHHHHHH
Q 006816          454 AFRPADGNETAGSYRVAIANRDVPSVIALSRQKIAANLEGTSADEVERGGYIVSDNSSEN-KPEIILIGTGTELSLCEGT  532 (630)
Q Consensus       454 v~~P~d~~e~~~~l~~a~~~~~~P~~ir~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~G-~~dvtiva~G~~v~~a~~a  532 (630)
                      |++|||++|+..+|+.|+.+.++|++|+++||++ |.++.+..+.+..|.|++.+.  .+ .+|++||++|++|.+|++|
T Consensus       490 V~RPaD~~Et~~aw~~Al~~~~gPt~LiltRQnl-p~l~~t~~~~~~kGaYvl~~~--~~~~pd~iliAtGSEV~lAv~A  566 (663)
T COG0021         490 VIRPADANETAAAWKYALERKDGPTALILTRQNL-PVLERTDLEGVAKGAYVLKDS--GGEDPDVILIATGSEVELAVEA  566 (663)
T ss_pred             eEecCChHHHHHHHHHHHhcCCCCeEEEEecCCC-CccCCCccccccCccEEEeec--CCCCCCEEEEecccHHHHHHHH
Confidence            9999999999999999999779999999999999 988876677889999999983  22 2899999999999999999


Q ss_pred             HHHHHhcCCceEEEEcccccccCcccHHHHhccCCCCCeeEEEEecCCcccccccccCcceEEEeccCCCCCCHHHHHHH
Q 006816          533 AKTLRQEGRRVRVVSLVCWRLFDRQPAEYKEKVLPSRVVKRVSVEAGSSVGWREYVGVEGKVIGVEEFGASGAYLDTFKK  612 (630)
Q Consensus       533 a~~L~~~gi~~~Vi~~~~i~pld~~~~~~~~~v~~~~~~~~v~vEe~~~~g~~~~~~~~~~~~g~d~f~~~g~~~~l~~~  612 (630)
                      ++.|+++|+.++||+++|++.||+|...|+++|++.....+|.+|.+...||..|.+.....+|+++|+.||+.++|+++
T Consensus       567 a~~L~~~~~~vrVVS~P~~~~fe~Q~~~Y~~~vL~~~v~~rvaiEa~~~~~W~ky~g~~g~~ig~~~FG~Sap~~~l~~~  646 (663)
T COG0021         567 AKELEAEGIKVRVVSMPSFELFEKQDEEYRESVLPGAVTARVAIEAGSALGWYKYVGLDGAVIGMDSFGASAPGDELFKE  646 (663)
T ss_pred             HHHHHhcCCceEEEeccchHHHHcCCHHHHHhhccCCccceEEEEeccccchhhhcCCCCcEEeeccCcCCCCHHHHHHH
Confidence            99999888999999999999999999999999999775435999999999999888777788999999999999999999


Q ss_pred             cCCChHHHHHHHHHhhh
Q 006816          613 YGFTIDNVTKVARSLLS  629 (630)
Q Consensus       613 ~gl~~~~I~~~i~~~l~  629 (630)
                      ||+|+|.|+++++++++
T Consensus       647 fGft~e~vv~~~~~~l~  663 (663)
T COG0021         647 FGFTVENVVAKAKSLLN  663 (663)
T ss_pred             hCCCHHHHHHHHHHhhC
Confidence            99999999999999874

>PRK12754 transketolase; Reviewed	Back alignment and domain information

>PRK12753 transketolase; Reviewed	Back alignment and domain information

>PLN02790 transketolase	Back alignment and domain information

>TIGR00232 tktlase_bact transketolase, bacterial and yeast	Back alignment and domain information

>PTZ00089 transketolase; Provisional	Back alignment and domain information

>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase	Back alignment and domain information

>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional	Back alignment and domain information

>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed	Back alignment and domain information

>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type	Back alignment and domain information

>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2	Back alignment and domain information

>PRK05261 putative phosphoketolase; Provisional	Back alignment and domain information

>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PRK09212 pyruvate dehydrogenase subunit beta; Validated	Back alignment and domain information

>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional	Back alignment and domain information

>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed	Back alignment and domain information

>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component	Back alignment and domain information

>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion]	Back alignment and domain information

>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>COG3957 Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion]	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O	Back alignment and domain information

>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed	Back alignment and domain information

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	Back alignment and domain information

>PLN02374 pyruvate dehydrogenase (acetyl-transferring)	Back alignment and domain information

>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex	Back alignment and domain information

>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha	Back alignment and domain information

>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)	Back alignment and domain information

>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion]	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion]	Back alignment and domain information

>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit	Back alignment and domain information

>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>PRK06163 hypothetical protein; Provisional	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl)	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit	Back alignment and domain information

>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC)	Back alignment and domain information

>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC)	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE)	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>PRK06154 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

>COG3962 Acetolactate synthase [Amino acid transport and metabolism]	Back alignment and domain information

>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed	Back alignment and domain information

>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>COG3960 Glyoxylate carboligase [General function prediction only]	Back alignment and domain information

>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion]	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	Back alignment and domain information

>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion]	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated	Back alignment and domain information

>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins	Back alignment and domain information

>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit	Back alignment and domain information

>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated	Back alignment and domain information

>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit	Back alignment and domain information

>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>PF09363 XFP_C: XFP C-terminal domain; InterPro: IPR018969 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK09212 pyruvate dehydrogenase subunit beta; Validated	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins	Back alignment and domain information

>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>TIGR00232 tktlase_bact transketolase, bacterial and yeast	Back alignment and domain information

>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>PTZ00089 transketolase; Provisional	Back alignment and domain information

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC)	Back alignment and domain information

>PRK06163 hypothetical protein; Provisional	Back alignment and domain information

Homologous Structure Templates