Citrus Sinensis ID: 006917

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-----
MGDSEQEPDGERNHRVAKLPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQAEAEAKRLAEHLKKTKISVPLN
ccccccccccccccccccccccccccEEEECccccccccccccccccccccHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccccEEEccccccccccccccccccHcccccccccccccccccccccccEEEcccEEEEEccccHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEcccHHHHHHHccccHHHHHHcccccccEEEEEEccccccccccHHcHHccccccccccccEEEccccEEEcccccccccccEECcHHHHHccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccccccHccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccc
********************VPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFR***********************************
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MGDSEQEPDGERNHRVAKLPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRxxxxxxxxxxxxxxxxxxxxxVPLN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable methionine--tRNA ligase probableQ9SVN5
Probable methionine--tRNA ligase probableQ9ZTS1
Methionine--tRNA ligase Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.probableA1B3P3

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.1.-.-1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.probable
6.1.1.-Ligases forming aminoacyl-tRNA and related compounds.probable
6.1.1.10Methionine--tRNA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RQG, chain A
Confidence level:very confident
Coverage over the Query: 25-550,563-592
View the alignment between query and template
View the model in PyMOL
Template: 3SP1, chain A
Confidence level:confident
Coverage over the Query: 7-72,88-155,176-185,210,229-240,251-271,288-353,364-486
View the alignment between query and template
View the model in PyMOL