Citrus Sinensis ID: 006965

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620---
MATYNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV
cccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccHHHHHHccHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccccccccEEcccccHHHHHcccccccccccccEEEEEcccccccccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHccccccccccccccccccEEEEEcccccccccccccccHHHHHHHHHHcHHcccccccEEEEcccccccccHHHHHHHHccccEEEEEcccccccccHHHHHHccccEEEEcHHHHHHHHccccccccccccccccccccccccHHHcHHHHccccccccEEccHHHHccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEcccccHHHHHHHccccccccccccccccccccEEEccccEEEcccEEEEEEcccccEEEcccccc
cccEEccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHEHcccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHHHccEEEEcccHHEcccccccccccccccEEEEcccEEEEEHHHHHHHHHcccccEEEEEEccccccccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEEEEcccccccccEEccHHHHHHHcccccEEEEEEEccccEcccccccHHHHHHHHHHHHcccccccccccccccEEEEEEcccccccccEEEccccHHHHHHccEEEEEcccccEEEEEccccEEccEEEEEcccccccEEEEEccccccHHHHHHHHHcccEEEEccHHHHHHHHHccccccccHHHHHHEccccccccHHHHHHHHHHHccccEEEEEEEcccccEEEccccccccccccccccccccEEEEEccccccccccccccEEEEEEccccccHEHHcccccHcEEEEccccccccEEEEEccccccccccEEEEEEEcccEEEEccccc
matynykaldcitsydiealgipSKLAEQLHEKLAEIVNthgaatpatwqnitthilspdlpfsfhQLLYygcykdfgpdppawipdpeaakvTNVGKLLQTRGeeflgsgykdpissfsnfqefsvsnpEVYWKTVLNEmstsfsvppqcilrenpngenhlsnpggqwlpgafvnpaknclsvnskrslDDIVIRWcdegdgglpvksmTLKELRAEVWLVAYALNALGldkgsaiaidmpmnVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIftqdliirgdksiplysrvidaqaplaivipakgssfsmklrdgdisWLDFLERVRKLKENEFAAVEQPVEAFTNIlfssgttgepkaipwtnatpfkaaADAWCHMDIRKADIVawptnlgwmmgPWLVYASLLNGASialyngsplgsgfAKFVQDAKVTMLGVVPSIVRtwkstncidgydwssircfgstgeasnvDEYLWLMGRAlykpvieycggteigggfiTGSLLQAQslaafstpamgcklfilgndgcpipqnvpgmgelalsplifgasstllnanhydvyfsgmpsrngqilrrhgdvfertsggyyrahgraddtmnlggikv
MATYNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDegdgglpvkSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISkakaiftqdliirgdksIPLYSRVIDAQAPLAIVIPakgssfsmklrdGDISWLDFLERVRKLKENEfaaveqpvEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTsggyyrahgraddtmnlggikv
MATYNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCggteigggfitgSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV
***YNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCIL**************GQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRA***************
**********CITSYDIEALGIPSKLAEQLHEKLAEI*****AA**ATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV
MATYNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV
**TYNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGG***
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MATYNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query623 2.2.26 [Sep-21-2011]
F4KBF3 721 Probable acyl-activating yes no 0.982 0.848 0.715 0.0
Q84P17 727 Probable acyl-activating no no 0.974 0.834 0.492 1e-175
A7MPJ7 652 Acetyl-coenzyme A synthet yes no 0.701 0.670 0.290 7e-36
P27550 652 Acetyl-coenzyme A synthet N/A no 0.707 0.676 0.286 3e-35
A8AN29 652 Acetyl-coenzyme A synthet yes no 0.786 0.751 0.280 3e-35
Q8Z1R0 652 Acetyl-coenzyme A synthet N/A no 0.786 0.751 0.280 4e-35
Q8FAY8 652 Acetyl-coenzyme A synthet yes no 0.707 0.676 0.286 4e-35
Q8ZKF6 652 Acetyl-coenzyme A synthet yes no 0.786 0.751 0.278 6e-35
Q8X5T5 652 Acetyl-coenzyme A synthet N/A no 0.707 0.676 0.284 4e-34
A4TS06 652 Acetyl-coenzyme A synthet yes no 0.780 0.745 0.275 4e-33
>sp|F4KBF3|AAE17_ARATH Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1 Back     alignment and function desciption
 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/619 (71%), Positives = 524/619 (84%), Gaps = 7/619 (1%)

Query: 6   YKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATP-ATWQNITTHILSPDLPFS 64
           YK+L+ IT  DIEALGI   ++E+L   L +I+  HG++TP  TW  I+  IL P+LPFS
Sbjct: 3   YKSLNSITKSDIEALGISGDVSEKLLRDLEDII--HGSSTPPETWIQISRRILHPNLPFS 60

Query: 65  FHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQE 124
           FHQ++YYGCYKDFGPD PAWIPDP+ A +TNVGKLL+ RG+EFLG  YK+P+SSFS+FQE
Sbjct: 61  FHQMMYYGCYKDFGPDLPAWIPDPKVASLTNVGKLLEKRGKEFLGGNYKNPVSSFSSFQE 120

Query: 125 FSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLS 184
           FSVSNPEVYWKTVL+E++  FSVPP+CIL ++ +G+N    PGG+WLPGA++NPA+NCL+
Sbjct: 121 FSVSNPEVYWKTVLDELNILFSVPPKCILEKDTSGDN----PGGKWLPGAYLNPARNCLT 176

Query: 185 VNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM 244
              KR LDDIVIRW DEG   LPV +MTL ELR++VWL A+AL+ALGL++ SAIA+DMPM
Sbjct: 177 NGFKRRLDDIVIRWRDEGSDDLPVNTMTLLELRSQVWLAAHALSALGLEEESAIAVDMPM 236

Query: 245 NVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSR 304
           NV SV+IYLAIVLAG++VVSIADSF+  EIS RL+ISKAKAIFTQD+IIRGDKSIPLY R
Sbjct: 237 NVESVIIYLAIVLAGHVVVSIADSFSPREISTRLKISKAKAIFTQDVIIRGDKSIPLYRR 296

Query: 305 VIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILF 364
           V+DA+APLAIV+PA+GSS  MKLR+ D+SW +FL   R L+  E+ A E+P  A+TNILF
Sbjct: 297 VVDAEAPLAIVVPARGSSCRMKLREKDLSWNNFLGNARNLRGVEYVAAEKPAGAYTNILF 356

Query: 365 SSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGA 424
           SSGTTGEPKAIPWTN +P K+AADAWCH+D+++ D+VAWPTNLGWMMGPWLVYASL+NGA
Sbjct: 357 SSGTTGEPKAIPWTNISPLKSAADAWCHLDVQRGDVVAWPTNLGWMMGPWLVYASLINGA 416

Query: 425 SIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEAS 484
            + LYNGSPLG  FAKFVQDA+V++LGV+PSIVRTW+++N   GYDWS IRCFGSTGEAS
Sbjct: 417 CMGLYNGSPLGPTFAKFVQDAEVSVLGVIPSIVRTWQNSNSTSGYDWSRIRCFGSTGEAS 476

Query: 485 NVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDG 544
           N+DEYLWLMGRA YKPVIEYCGGTEIGG FI+GSLLQ QSLAAFST AMGCKLFIL  D 
Sbjct: 477 NIDEYLWLMGRAHYKPVIEYCGGTEIGGSFISGSLLQPQSLAAFSTAAMGCKLFILDEDS 536

Query: 545 CPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGG 604
            PIP    G+GELAL P +FGASSTLLN NH+ VYF GMP+  GQILRRHGD+FERTS G
Sbjct: 537 NPIPPYAAGVGELALCPHMFGASSTLLNGNHFKVYFQGMPTFQGQILRRHGDLFERTSKG 596

Query: 605 YYRAHGRADDTMNLGGIKV 623
           YYRAHGRADDTMNLGGIKV
Sbjct: 597 YYRAHGRADDTMNLGGIKV 615
May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q84P17|AEE18_ARATH Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1 Back     alignment and function description
>sp|A7MPJ7|ACSA_CROS8 Acetyl-coenzyme A synthetase OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|P27550|ACSA_ECOLI Acetyl-coenzyme A synthetase OS=Escherichia coli (strain K12) GN=acs PE=1 SV=2 Back     alignment and function description
>sp|A8AN29|ACSA_CITK8 Acetyl-coenzyme A synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q8Z1R0|ACSA_SALTI Acetyl-coenzyme A synthetase OS=Salmonella typhi GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q8FAY8|ACSA_ECOL6 Acetyl-coenzyme A synthetase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q8ZKF6|ACSA_SALTY Acetyl-coenzyme A synthetase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=acs PE=1 SV=1 Back     alignment and function description
>sp|Q8X5T5|ACSA_ECO57 Acetyl-coenzyme A synthetase OS=Escherichia coli O157:H7 GN=acs PE=3 SV=1 Back     alignment and function description
>sp|A4TS06|ACSA_YERPP Acetyl-coenzyme A synthetase OS=Yersinia pestis (strain Pestoides F) GN=acs PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query623
225455790 726 PREDICTED: acetyl-coenzyme A synthetase- 0.990 0.849 0.790 0.0
380042384 757 acyl-activating enzyme 12 [Cannabis sati 0.990 0.815 0.783 0.0
255541886722 acetyl-CoA synthetase, putative [Ricinus 0.985 0.850 0.797 0.0
356567690 727 PREDICTED: acetyl-coenzyme A synthetase- 0.991 0.850 0.766 0.0
356556613 744 PREDICTED: acetyl-coenzyme A synthetase- 0.991 0.830 0.765 0.0
449440895 725 PREDICTED: probable acyl-activating enzy 0.993 0.853 0.760 0.0
224130076663 predicted protein [Populus trichocarpa] 0.892 0.838 0.831 0.0
297734139662 unnamed protein product [Vitis vinifera] 0.892 0.839 0.812 0.0
380042362720 acyl-activating enzyme 1 [Cannabis sativ 0.985 0.852 0.714 0.0
297812451721 acyl-activating enzyme 17 [Arabidopsis l 0.982 0.848 0.723 0.0
>gi|225455790|ref|XP_002270918.1| PREDICTED: acetyl-coenzyme A synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1042 bits (2695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/617 (79%), Positives = 550/617 (89%)

Query: 7   KALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFH 66
           K LD ITS DI ALGIPS+ AE+LH+ L +I+ + GAATP TW  I+  +L+PDLP+S H
Sbjct: 4   KTLDSITSQDIAALGIPSEEAEKLHQTLLQIITSCGAATPQTWSRISKELLNPDLPYSLH 63

Query: 67  QLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFS 126
           Q++YYGCY  FGPDPPAW+PDPE   +TNVG+LL+ RG+EFLGS YKDPISSFS+FQ+FS
Sbjct: 64  QMMYYGCYSHFGPDPPAWLPDPENVMLTNVGQLLERRGKEFLGSRYKDPISSFSDFQKFS 123

Query: 127 VSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVN 186
           VSNPEVYWKTVL+E+S SFSVPPQC+L +NP+ EN LS PGGQWLPGAF+NPA+NCLSVN
Sbjct: 124 VSNPEVYWKTVLDELSISFSVPPQCVLYDNPSRENGLSYPGGQWLPGAFINPARNCLSVN 183

Query: 187 SKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV 246
            KR+LDD V+ W DEGD G+P+  MTL+ELR EVW VAYAL+ LGL+KGSAIAIDMPMN 
Sbjct: 184 DKRTLDDTVVIWHDEGDDGMPINRMTLEELRREVWSVAYALDTLGLEKGSAIAIDMPMNA 243

Query: 247 NSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVI 306
           +SVVIYLAIVLAGYIVVSIADSFAS EIS RL+IS AKAIFTQD IIRGDKS+PLYSRV+
Sbjct: 244 SSVVIYLAIVLAGYIVVSIADSFASREISTRLKISNAKAIFTQDFIIRGDKSLPLYSRVV 303

Query: 307 DAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSS 366
           DAQ+P AIVIPA GSSFSMKLRDGD+SW DFL+R    +++EFAA+EQP+EAF NILFSS
Sbjct: 304 DAQSPTAIVIPAGGSSFSMKLRDGDMSWHDFLQRAINSRDDEFAAIEQPIEAFMNILFSS 363

Query: 367 GTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASI 426
           GTTGEPKAIPWTNATP KAAADAWCHMDIRK DIVAWPTNLGWMMGPWLVYASLLNGA+I
Sbjct: 364 GTTGEPKAIPWTNATPLKAAADAWCHMDIRKGDIVAWPTNLGWMMGPWLVYASLLNGATI 423

Query: 427 ALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNV 486
           ALYNG+PLGSGFAKFVQDAKVTMLGV+PSIVRTWKSTNC  G DWSSIRCF STGEAS+V
Sbjct: 424 ALYNGAPLGSGFAKFVQDAKVTMLGVIPSIVRTWKSTNCTAGLDWSSIRCFASTGEASSV 483

Query: 487 DEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCP 546
           DEYLWLMGRA YKP+IEYCGGTEIGGGF+TGSLLQAQSLA+FSTPAMGC LFI+G+DG  
Sbjct: 484 DEYLWLMGRAQYKPIIEYCGGTEIGGGFVTGSLLQAQSLASFSTPAMGCSLFIIGDDGNL 543

Query: 547 IPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYY 606
           +PQ+  GMGELAL PL+FGAS+TLLNA+HYDVYF GMP  NG++LRRHGDVFERTS GYY
Sbjct: 544 LPQDASGMGELALGPLMFGASTTLLNADHYDVYFKGMPIWNGKVLRRHGDVFERTSRGYY 603

Query: 607 RAHGRADDTMNLGGIKV 623
           RAHGRADDTMN+GGIKV
Sbjct: 604 RAHGRADDTMNIGGIKV 620

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|380042384|gb|AFD33356.1| acyl-activating enzyme 12 [Cannabis sativa] Back     alignment and taxonomy information
>gi|255541886|ref|XP_002512007.1| acetyl-CoA synthetase, putative [Ricinus communis] gi|223549187|gb|EEF50676.1| acetyl-CoA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356567690|ref|XP_003552050.1| PREDICTED: acetyl-coenzyme A synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|356556613|ref|XP_003546618.1| PREDICTED: acetyl-coenzyme A synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|449440895|ref|XP_004138219.1| PREDICTED: probable acyl-activating enzyme 17, peroxisomal-like [Cucumis sativus] gi|449477120|ref|XP_004154935.1| PREDICTED: probable acyl-activating enzyme 17, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224130076|ref|XP_002328648.1| predicted protein [Populus trichocarpa] gi|222838824|gb|EEE77175.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297734139|emb|CBI15386.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|380042362|gb|AFD33345.1| acyl-activating enzyme 1 [Cannabis sativa] Back     alignment and taxonomy information
>gi|297812451|ref|XP_002874109.1| acyl-activating enzyme 17 [Arabidopsis lyrata subsp. lyrata] gi|297319946|gb|EFH50368.1| acyl-activating enzyme 17 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query623
TAIR|locus:2178277 721 AAE17 "acyl-activating enzyme 0.982 0.848 0.699 1.3e-240
TAIR|locus:2035721 727 AAE18 "acyl-activating enzyme 0.975 0.836 0.481 1.1e-156
TIGR_CMR|BA_2553 646 BA_2553 "acetoacetyl-CoA synth 0.775 0.747 0.280 7.3e-43
UNIPROTKB|P27550 652 acs [Escherichia coli K-12 (ta 0.701 0.670 0.286 2.9e-31
TIGR_CMR|SO_2743 650 SO_2743 "acetyl-coenzyme A syn 0.765 0.733 0.260 9.8e-28
UNIPROTKB|Q9KV59 649 acsA "Acetyl-coenzyme A synthe 0.714 0.685 0.271 7.8e-27
TIGR_CMR|VC_0298 649 VC_0298 "acetyl-CoA synthase" 0.714 0.685 0.271 7.8e-27
UNIPROTKB|Q3AEC0 647 acoE "Acetyl-coenzyme A synthe 0.704 0.678 0.266 1e-25
TIGR_CMR|CHY_0659 647 CHY_0659 "acetyl-CoA synthetas 0.704 0.678 0.266 1e-25
ZFIN|ZDB-GENE-050320-139 693 acss1 "acyl-CoA synthetase sho 0.775 0.696 0.249 1.2e-25
TAIR|locus:2178277 AAE17 "acyl-activating enzyme 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2319 (821.4 bits), Expect = 1.3e-240, P = 1.3e-240
 Identities = 433/619 (69%), Positives = 513/619 (82%)

Query:     6 YKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPA-TWQNITTHILSPDLPFS 64
             YK+L+ IT  DIEALGI   ++E+L   L +I+  HG++TP  TW  I+  IL P+LPFS
Sbjct:     3 YKSLNSITKSDIEALGISGDVSEKLLRDLEDII--HGSSTPPETWIQISRRILHPNLPFS 60

Query:    65 FHQLLYYGCYKDFGPDPPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQE 124
             FHQ++YYGCYKDFGPD PAWIPDP+ A +TNVGKLL+ RG+EFLG  YK+P+SSFS+FQE
Sbjct:    61 FHQMMYYGCYKDFGPDLPAWIPDPKVASLTNVGKLLEKRGKEFLGGNYKNPVSSFSSFQE 120

Query:   125 FSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLS 184
             FSVSNPEVYWKTVL+E++  FSVPP+CIL ++ +G+N    PGG+WLPGA++NPA+NCL+
Sbjct:   121 FSVSNPEVYWKTVLDELNILFSVPPKCILEKDTSGDN----PGGKWLPGAYLNPARNCLT 176

Query:   185 VNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM 244
                KR LDDIVIRW DEG   LPV +MTL ELR++VWL A+AL+ALGL++ SAIA+DMPM
Sbjct:   177 NGFKRRLDDIVIRWRDEGSDDLPVNTMTLLELRSQVWLAAHALSALGLEEESAIAVDMPM 236

Query:   245 NVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSR 304
             NV SV+IYLAIVLAG++VVSIADSF+  EIS RL+ISKAKAIFTQD+IIRGDKSIPLY R
Sbjct:   237 NVESVIIYLAIVLAGHVVVSIADSFSPREISTRLKISKAKAIFTQDVIIRGDKSIPLYRR 296

Query:   305 VIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILF 364
             V+DA+APLAIV+PA+GSS  MKLR+ D+SW +FL   R L+  E+ A E+P  A+TNILF
Sbjct:   297 VVDAEAPLAIVVPARGSSCRMKLREKDLSWNNFLGNARNLRGVEYVAAEKPAGAYTNILF 356

Query:   365 SSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGA 424
             SSGTTGEPKAIPWTN +P K+AADAWCH+D+++ D+VAWPTNLGWMMGPWLVYASL+NGA
Sbjct:   357 SSGTTGEPKAIPWTNISPLKSAADAWCHLDVQRGDVVAWPTNLGWMMGPWLVYASLINGA 416

Query:   425 SIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEAS 484
              + LYNGSPLG  FAKFVQDA+V++LGV+PSIVRTW+++N   GYDWS IRCFGSTGEAS
Sbjct:   417 CMGLYNGSPLGPTFAKFVQDAEVSVLGVIPSIVRTWQNSNSTSGYDWSRIRCFGSTGEAS 476

Query:   485 NVDEYLWLMGRALYKPVIEYCXXXXXXXXXXXXSLLQAQSLAAFSTPAMGCKLFILGNDG 544
             N+DEYLWLMGRA YKPVIEYC            SLLQ QSLAAFST AMGCKLFIL  D 
Sbjct:   477 NIDEYLWLMGRAHYKPVIEYCGGTEIGGSFISGSLLQPQSLAAFSTAAMGCKLFILDEDS 536

Query:   545 CPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGG 604
              PIP    G+GELAL P +FGASSTLLN NH+ VYF GMP+  GQILRRHGD+FERTS G
Sbjct:   537 NPIPPYAAGVGELALCPHMFGASSTLLNGNHFKVYFQGMPTFQGQILRRHGDLFERTSKG 596

Query:   605 YYRAHGRADDTMNLGGIKV 623
             YYRAHGRADDTMNLGGIKV
Sbjct:   597 YYRAHGRADDTMNLGGIKV 615
GO:0003824 "catalytic activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016874 "ligase activity" evidence=ISS
GO:0005829 "cytosol" evidence=RCA
TAIR|locus:2035721 AAE18 "acyl-activating enzyme 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2553 BA_2553 "acetoacetyl-CoA synthase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P27550 acs [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2743 SO_2743 "acetyl-coenzyme A synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KV59 acsA "Acetyl-coenzyme A synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0298 VC_0298 "acetyl-CoA synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q3AEC0 acoE "Acetyl-coenzyme A synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0659 CHY_0659 "acetyl-CoA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050320-139 acss1 "acyl-CoA synthetase short-chain family member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F4KBF3AAE17_ARATH6, ., 2, ., 1, ., -0.71560.98230.8488yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
PLN03052 728 PLN03052, PLN03052, acetate--CoA ligase; Provision 0.0
PLN03051 499 PLN03051, PLN03051, acyl-activating enzyme; Provis 0.0
cd05968 474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 2e-80
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 2e-66
cd05943 616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 4e-46
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 1e-44
PRK03584 655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 1e-43
TIGR01217 652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 1e-36
TIGR02188 625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 2e-35
cd05966 602 cd05966, ACS, Acetyl-CoA synthetase (also known as 2e-31
cd05967 607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 6e-29
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 2e-28
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 3e-27
TIGR02316 628 TIGR02316, propion_prpE, propionate--CoA ligase 1e-26
PRK00174 637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 3e-26
PLN02654 666 PLN02654, PLN02654, acetate-CoA ligase 7e-26
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 4e-19
PRK10524 629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 5e-19
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 3e-18
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 3e-17
PRK04319 570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 7e-13
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 2e-12
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 2e-12
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 3e-12
PTZ00237 647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 4e-11
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 5e-11
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 7e-11
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 7e-11
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 2e-10
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 5e-10
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 1e-09
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-09
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 2e-09
COG1022 613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 4e-09
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 1e-08
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 2e-08
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 6e-08
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 6e-08
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 6e-08
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 2e-07
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 4e-07
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 7e-07
PRK07786 542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-06
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 1e-06
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 2e-06
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 3e-06
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 3e-06
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 3e-06
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 4e-06
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 5e-06
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 5e-06
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 6e-06
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 6e-06
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 7e-06
cd05921 559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 8e-06
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 1e-05
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 2e-05
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 2e-05
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 3e-05
PRK08180 614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 3e-05
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 4e-05
cd05932 504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 6e-05
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 8e-05
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 9e-05
PRK05857 540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 9e-05
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 1e-04
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 1e-04
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 1e-04
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 1e-04
PRK07529 632 PRK07529, PRK07529, AMP-binding domain protein; Va 2e-04
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 2e-04
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 2e-04
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 3e-04
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 3e-04
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 3e-04
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 4e-04
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 4e-04
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 4e-04
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 4e-04
PRK12582 624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 4e-04
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 9e-04
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 0.001
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 0.001
PLN02430 660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 0.001
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 0.001
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 0.001
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 0.001
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 0.003
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 0.004
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information 
 Score = 1162 bits (3008), Expect = 0.0
 Identities = 428/623 (68%), Positives = 503/623 (80%), Gaps = 10/623 (1%)

Query: 6   YKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSF 65
            K++D IT  D+EA G+  + AE+  ++L  I+   GA+ P+ W+ I+  +L+P  PF+ 
Sbjct: 5   GKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGASPPSIWRRISQSLLTPSHPFAL 64

Query: 66  HQLLYYGCYKDFGPD----PPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSN 121
           HQL+YY CYK++  D    PPAW P PE AK+TN+G+LL+ RG+E LGS YKDPISSFS 
Sbjct: 65  HQLMYYSCYKNWDSDTLGPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSE 124

Query: 122 FQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKN 181
           FQ FSV NPEVYW  VL+E+S  FSVPP+CIL  +       SNPGGQWLPGA +N A+ 
Sbjct: 125 FQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSD-----ESNPGGQWLPGAVLNVAEC 179

Query: 182 CLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAID 241
           CL+    ++ D I I W DEG   LPV  MTL ELR++V  VA AL+ALG +KG AIAID
Sbjct: 180 CLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239

Query: 242 MPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPL 301
           MPMNV++V+IYLAI+LAG +VVSIADSFA  EI+ RL+ISKAKAIFTQD+I+RG KSIPL
Sbjct: 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPL 299

Query: 302 YSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKL-KENEFAAVEQPVEAFT 360
           YSRV++A+AP AIV+PA G S  +KLR+GD+SW DFL R   L + +E+ AVEQPVEAFT
Sbjct: 300 YSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFT 359

Query: 361 NILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASL 420
           NILFSSGTTGEPKAIPWT  TP +AAADAW H+DIRK DIV WPTNLGWMMGPWLVYASL
Sbjct: 360 NILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASL 419

Query: 421 LNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGST 480
           LNGA++ALYNGSPLG GFAKFVQDAKVTMLG VPSIV+TWK+TNC+ G DWSSIRCFGST
Sbjct: 420 LNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479

Query: 481 GEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFIL 540
           GEAS+VD+YLWLM RA YKP+IEYCGGTE+GGGF+TGSLLQ Q+ AAFSTPAMGCKLFIL
Sbjct: 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFIL 539

Query: 541 GNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFER 600
            + G P P + P  GELAL PL+FGASSTLLNA+HY VYF GMP  NG+ILRRHGD+FER
Sbjct: 540 DDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFER 599

Query: 601 TSGGYYRAHGRADDTMNLGGIKV 623
           TSGGYYRAHGRADDTMNLGGIKV
Sbjct: 600 TSGGYYRAHGRADDTMNLGGIKV 622

Length = 728
>gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 623
PLN03052 728 acetate--CoA ligase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PTZ00237 647 acetyl-CoA synthetase; Provisional 100.0
TIGR02316 628 propion_prpE propionate--CoA ligase. This family c 100.0
PLN02654 666 acetate-CoA ligase 100.0
TIGR02188 625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK03584 655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK10524 629 prpE propionyl-CoA synthetase; Provisional 100.0
TIGR01217 652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK00174 637 acetyl-CoA synthetase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
KOG1175 626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN02614 666 long-chain acyl-CoA synthetase 100.0
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
KOG1177 596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
PLN02736 651 long-chain acyl-CoA synthetase 100.0
PRK04319 570 acetyl-CoA synthetase; Provisional 100.0
PLN02861 660 long-chain-fatty-acid-CoA ligase 100.0
PTZ00342 746 acyl-CoA synthetase; Provisional 100.0
PRK07529 632 AMP-binding domain protein; Validated 100.0
PTZ00216 700 acyl-CoA synthetase; Provisional 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PLN02860 563 o-succinylbenzoate-CoA ligase 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PLN02387 696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK09274552 peptide synthase; Provisional 100.0
PLN03051 499 acyl-activating enzyme; Provisional 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07769 631 long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1022 613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02430 660 long-chain-fatty-acid-CoA ligase 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK12476 612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK08180 614 feruloyl-CoA synthase; Reviewed 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK05857 540 acyl-CoA synthetase; Validated 100.0
KOG1256 691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK12582 624 acyl-CoA synthetase; Provisional 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK07470 528 acyl-CoA synthetase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK07786 542 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK08279 600 long-chain-acyl-CoA synthetase; Validated 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06087 547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK06155 542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK05620 576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK06164 540 acyl-CoA synthetase; Validated 100.0
PLN03102 579 acyl-activating enzyme; Provisional 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK13388 540 acyl-CoA synthetase; Provisional 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK07868 994 acyl-CoA synthetase; Validated 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02479 567 acetate-CoA ligase 100.0
PRK07867 529 acyl-CoA synthetase; Validated 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK05850 578 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK09192 579 acyl-CoA synthetase; Validated 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
KOG1180 678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
KOG1179 649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 99.97
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 99.96
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.95
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.94
TIGR03335 445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.94
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.89
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.8
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.48
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.36
PF1374591 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A. 99.25
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.92
PF03321 528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 97.58
PRK09188 365 serine/threonine protein kinase; Provisional 97.28
PLN02249 597 indole-3-acetic acid-amido synthetase 97.13
PLN02247 606 indole-3-acetic acid-amido synthetase 97.08
PLN02620 612 indole-3-acetic acid-amido synthetase 96.89
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 94.23
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 85.19
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 81.4
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.1e-85  Score=740.36  Aligned_cols=615  Identities=70%  Similarity=1.193  Sum_probs=523.8

Q ss_pred             cccccccccChHHHHHcCCChHHHHHHHHHHHHHHHhhCCCChhhHHHHHHhhcCCCCCCCccchhheeecccCCCC---
Q 006965            4 YNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD---   80 (623)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~hq~~Pfe~lv~~l~~~r~~~~~pl~~fqv~~~~~~~---   80 (623)
                      .-+|.+|-|+..||+..|+..++++.|.++|+++..+...+...++-..-.+.|+|.-..+.|.|||+-++-+|++.   
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (728)
T PLN03052          3 MAGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGASPPSIWRRISQSLLTPSHPFALHQLMYYSCYKNWDSDTLG   82 (728)
T ss_pred             cccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHhcCCCCCccHHHHhhhhcccCCCccccC
Confidence            35789999999999999999999999999999999988777788888888899999999999999988888888222   


Q ss_pred             -CCCCCCChhhhhhccHHHHHHHhcccccCCCCCCCCCChHHHHHHHhhCHHHHHHHHHHhcCCccccCCcccccCCCCC
Q 006965           81 -PPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNG  159 (623)
Q Consensus        81 -~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~f~~~tv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  159 (623)
                       .++|.|++....+++|..+++..+.......|...+.+|+.|+++++++++.||..+++.+.+.|.+++.++++...  
T Consensus        83 ~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~--  160 (728)
T PLN03052         83 PPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSD--  160 (728)
T ss_pred             CCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCC--
Confidence             68999999888889999888876443333336666679999999999999999999999999999999999986521  


Q ss_pred             CCCCCCCCCccCCCCcccHHhhhhccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006965          160 ENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIA  239 (623)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va  239 (623)
                         ...+..+||+++.+|+++++|++++.++|+++|+++.+++.++.+.+++||+||.++++++|+.|+++|+++||+|+
T Consensus       161 ---~~~~~~~wf~g~~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVa  237 (728)
T PLN03052        161 ---ESNPGGQWLPGAVLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIA  237 (728)
T ss_pred             ---CCCCCCEECCCCEeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence               13466799999999999999999877899999999977532334567999999999999999999999999999999


Q ss_pred             EEcCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHHhcCceEEEEecccccCCccccchhhhhhhcCCeEEEEcCC
Q 006965          240 IDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIVIPAK  319 (623)
Q Consensus       240 i~~~~s~~~vva~LA~~~aGa~~vpldp~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (623)
                      ++++|++++++++|||+++|++++|++|+++.+++.+++++++++++|+++...++++.++....+.+.....++++...
T Consensus       238 i~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~  317 (728)
T PLN03052        238 IDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPAD  317 (728)
T ss_pred             EEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999988777887887777766555555555533


Q ss_pred             CCCcccccCCCCccHHHHHHhhhccc-ccccccccCCCCCeEEEEecCCCCCCceEEEeCCchHHHHHHHHHHhcCCCCC
Q 006965          320 GSSFSMKLRDGDISWLDFLERVRKLK-ENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKA  398 (623)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~  398 (623)
                      ..............|++++....... ...+++....+++++||+|||||||+||||+++|+++++.+......++++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~  397 (728)
T PLN03052        318 GKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKG  397 (728)
T ss_pred             CCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCC
Confidence            21111111123567887765432100 11122233457999999999999999999999999988887777777899999


Q ss_pred             CEEEEcCCCcccchHHHHHHHHHhCCeEEEeCCCCChhhHHHHHHHcCCcEEEechHHHHHHHhcCcCCCCCCccceEEE
Q 006965          399 DIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFG  478 (623)
Q Consensus       399 d~~l~~~~l~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~v~  478 (623)
                      |++++.++++|+++.+.++++|++|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.++
T Consensus       398 d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~  477 (728)
T PLN03052        398 DIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFG  477 (728)
T ss_pred             cEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEE
Confidence            99999999999999998999999999999998877888899999999999999999999999887655667899999999


Q ss_pred             eecCCCCHHHHHHHHhccCCCCeeecccccccccccccCCccccCccCccCCCCCCcEEEEEcCCCCcCCCCCCceeEEE
Q 006965          479 STGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELA  558 (623)
Q Consensus       479 ~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~Vld~~~~~vp~G~~giGel~  558 (623)
                      +|||+++++...|+.+.++.++++|.||+||++++++...+..+...+++|+|++|++++|+|++|+++|.|++++|||+
T Consensus       478 s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~  557 (728)
T PLN03052        478 STGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELA  557 (728)
T ss_pred             ecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEE
Confidence            99999999999988887665689999999999876555444444566789999999999999999999999875569999


Q ss_pred             EeCccCCCCccccccccccccccccccCCCceeEEecceEEEecCCcEEEEcccCCeeecCceeC
Q 006965          559 LSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV  623 (623)
Q Consensus       559 i~~~~~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDlg~~~~dG~l~~~GR~dd~iki~G~rI  623 (623)
                      |++.++++..+|++++.++.||..+|+.+|++||+|||+|++|+||+++|+||+||+||++|+||
T Consensus       558 v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI  622 (728)
T PLN03052        558 LFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKV  622 (728)
T ss_pred             EeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEe
Confidence            98888877777888888889999888888888999999999999999999999999999999997

>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
2p20_A 652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 2e-32
2p2j_A 652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 2e-32
2p2q_A 652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 2e-32
2p2f_A 652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 2e-32
2p2b_A 652 Acetyl-coa Synthetase, V386a Mutation Length = 652 2e-32
2p2m_A 652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 5e-32
1pg3_A 652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 2e-31
1ry2_A 663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 1e-20
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 2e-07
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 4e-07
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 5e-06
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 5e-06
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 1e-05
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 1e-05
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 4e-05
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 2e-04
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure 
Iteration: 1

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 229/531 (43%), Gaps = 41/531 (7%)
Query: 120 SNFQEFSVSNPEVY---WKTVLNEMSTSFSVPPQCILRENP--NGENHLSNPGG---QWL 171
           +N  +  + NPE Y   +K  +N+  T +    + +    P    +N    PG    +W 
Sbjct: 11  ANIADRCLINPEQYETKYKQSINDPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWY 70
Query: 172 PGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALG 231
               +N A NCL  + + + D   I W  EGD     K ++ +EL  +V   A  L  LG
Sbjct: 71  EDGTLNLAANCLDRHLQENGDRTAIIW--EGDDTSQSKHISYRELHRDVCRFANTLLDLG 128
Query: 232 LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDL 291
           + KG  +AI MPM   + V  LA    G +   I   F+   ++ R+  S ++ + T D 
Sbjct: 129 IKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADE 188
Query: 292 IIRGDKSIPLYSRVIDA-----QAPLAIVIPAKGSSFSMKLRDG-DISWLDFLERVRKLK 345
            +R  +SIPL   V DA        +  VI  K +   +  ++G D+ W D +E+     
Sbjct: 189 GVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEH 248
Query: 346 ENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHM-DIRKADIVAWP 404
           + E    E P+     IL++SG+TG+PK +  T       AA  + ++ D    DI    
Sbjct: 249 QPEAMNAEDPL----FILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCT 304
Query: 405 TNLGWMMG-PWLVYASLLNGASIALYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTW 460
            ++GW+ G  +L+Y  L  GA+  ++ G    P  +   + V   +V +L   P+ +R  
Sbjct: 305 ADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRAL 364
Query: 461 --KSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYK--PVIEYCXXXXXXXXXXX 516
             +    I+G D SS+R  GS GE  N + + W   +   +  PV++             
Sbjct: 365 MAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVD-TWWQTETGGFMI 423
Query: 517 XSLLQAQSLAAFST--PAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNAN 574
             L  A  L A S   P  G +  ++ N+G   PQ     G L ++    G + TL   +
Sbjct: 424 TPLPGAIELKAGSATRPFFGVQPALVDNEGH--PQEGATEGNLVITDSWPGQARTLFGDH 481
Query: 575 HY--DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV 623
                 YFS   +     +   GD   R   GYY   GR DD +N+ G ++
Sbjct: 482 ERFEQTYFSTFKN-----MYFSGDGARRDEDGYYWITGRVDDVLNVSGHRL 527
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-33
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 1e-33
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 1e-32
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 3e-30
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 4e-29
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 5e-24
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 3e-23
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 3e-23
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 8e-22
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 1e-19
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 2e-19
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 4e-19
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 4e-18
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 4e-17
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 3e-16
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 7e-15
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 2e-12
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 3e-09
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 4e-09
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 8e-09
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-08
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-07
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 2e-05
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 1e-04
3l8c_A 521 D-alanine--poly(phosphoribitol) ligase subunit 1; 2e-04
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 8e-04
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
 Score =  134 bits (339), Expect = 1e-33
 Identities = 88/467 (18%), Positives = 155/467 (33%), Gaps = 57/467 (12%)

Query: 170 WLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA 229
             P A  N A     +N  R+                   S T  EL       A AL  
Sbjct: 17  EAPPALFNFAAYLFRLNETRA-GKTAYIDDT--------GSTTYGELEERARRFASALRT 67

Query: 230 LGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQ 289
           LG+     I + M   V   V +L  + AG + V         +    L  S A+A+   
Sbjct: 68  LGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIAS 127

Query: 290 DLIIRGDKSIPLYSRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEF 349
             +      +   ++ +++       +           R+ +       E +        
Sbjct: 128 GAL------VQNVTQALESAEHDGCQLIVSQP------RESEPRLAPLFEELIDAAAPAA 175

Query: 350 AAVEQPVE--AFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH--MDIRKADIVAWPT 405
            A     +  AF   L+SSG+TG+PK    T+A  +   A+ +    + I + D+V    
Sbjct: 176 KAAATGCDDIAF--WLYSSGSTGKPKGTVHTHANLY-WTAELYAKPILGIAENDVVFSAA 232

Query: 406 NLGWMMGPW-LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN 464
            L +  G    +   L  GA+  L    P        + + + T+   VP++      + 
Sbjct: 233 KLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSP 292

Query: 465 CIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALY-KPVIEYCGGTEIGGGFITGSLLQAQ 523
            +      +IR   S GEA   +        A +   +++  G TE+   F++      +
Sbjct: 293 NLPARADVAIRICTSAGEALPREIGER--FTAHFGCEILDGIGSTEMLHIFLSNRAGAVE 350

Query: 524 SLAAFSTPAMGCKLFILGNDGCPIPQNVPG-MGELALS-PLIF-GASSTLLNANHYDVYF 580
                  P  G ++ +    G  +P    G +G+L +  P                  Y+
Sbjct: 351 YGTT-GRPVPGYEIELRDEAGHAVP---DGEVGDLYIKGPSAAVM-------------YW 393

Query: 581 SGMPSRNGQILR----RHGDVFERTSGGYYRAHGRADDTMNLGGIKV 623
                ++         R GD + R   G Y   GR+DD + + G  V
Sbjct: 394 -NNREKSRATFLGEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYV 439
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query623
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
1amu_A 563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3fce_A 512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3e7w_A 511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3l8c_A 521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3ite_A 562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 100.0
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 98.62
4eql_A 581 4-substituted benzoates-glutamate ligase GH3.12; f 98.4
4b2g_A 609 GH3-1 auxin conjugating enzyme; signaling protein, 98.32
4epl_A 581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.25
4hvm_A493 Tlmii; PSI-biology, midwest center for structural 98.11
1l5a_A436 Amide synthase, VIBH; nonribosomal peptide synthet 97.92
2xhg_A466 Tyrocidine synthetase A; isomerase, nonribosomal p 96.67
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 90.67
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 90.05
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 89.35
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 84.32
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 83.63
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 81.81
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
Probab=100.00  E-value=7e-81  Score=751.62  Aligned_cols=544  Identities=16%  Similarity=0.138  Sum_probs=437.0

Q ss_pred             HHHcCCChHHHHHHHHHHHHHHHhhCC--CChhhHHHHHHhhcCCCCCCCccchhheeecccCCCC-----C--CCCCCC
Q 006965           17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD-----P--PAWIPD   87 (623)
Q Consensus        17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~Pfe~lv~~l~~~r~~~~~pl~~fqv~~~~~~~-----~--~~~~~~   87 (623)
                      .++++++.++..+|.++|++++++.++  +||++||++|++.++      ++|+  ||+||++...     .  ....++
T Consensus       301 tlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~i~~~l~------~~~l--f~~~~~~~~~~~~~~~~~~~~~~g  372 (1304)
T 2vsq_A          301 VVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYDIQSQAD------QPKL--IDHIIVFENYPLQDAKNEESSENG  372 (1304)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHHHHHSSS------CSSS--CCCEEEECSSCHHHHSCCCHHHHS
T ss_pred             EEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHHHHHHhC------CCcc--cceeEEEeecccccccccccccCC
Confidence            467888889999999999999998877  999999999999875      6799  9999988110     0  000000


Q ss_pred             h-------hhhhhccHHHHHHHhcccccCCC-CCCCCCChHHHHHHHhhCHHHHHHHHHHhcCCccccCCcccccCCCCC
Q 006965           88 P-------EAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNG  159 (623)
Q Consensus        88 ~-------~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~f~~~tv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  159 (623)
                      .       ...++|||++.+.. ++++...+ |     +.++|++++++++.++|..+|+++.    ..|+..+...++.
T Consensus       373 ~~~~~~~~~~~~~~dL~l~~~~-~~~l~~~~~y-----~~~lf~~~~i~~l~~~~~~lL~~l~----~~p~~~~~~~~~l  442 (1304)
T 2vsq_A          373 FDMVDVHVFEKSNYDLNLMASP-GDEMLIKLAY-----NENVFDEAFILRLKSQLLTAIQQLI----QNPDQPVSTINLV  442 (1304)
T ss_dssp             EEEEEEEECCCCCSSEEEEEEC-SSSCEEEEEE-----ETTTSCHHHHHHHHHHHHHHHHHHH----HSTTSBGGGCCCC
T ss_pred             ceeEeeecccccccCeEEEEec-CCcEEEEEEE-----CCccCCHHHHHHHHHHHHHHHHHhc----cCccccccccCCC
Confidence            0       12357777765432 45677777 8     7799999999999999999999984    3444444433332


Q ss_pred             CC-CCCCCCCccCCCCcc---cHHhhhhccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHCCCCCC
Q 006965          160 EN-HLSNPGGQWLPGAFV---NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKG  235 (623)
Q Consensus       160 ~~-~~~~~~~~~~~~~~~---~~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g  235 (623)
                      .. ++...+..|+.....   ....++|+++++++||++|+++.++        ++||+||+++++++|++|+++|+++|
T Consensus       443 ~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g  514 (1304)
T 2vsq_A          443 DDREREFLLTGLNPPAQAHETKPLTYWFKEAVNANPDAPALTYSGQ--------TLSYRELDEEANRIARRLQKHGAGKG  514 (1304)
T ss_dssp             CHHHHHHHHTTTSCCCCCCCCCCHHHHHHHHHHHCTTSEEEESSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred             CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHhcCcCCc
Confidence            22 112223455544321   2356788899999999999998775        99999999999999999999999999


Q ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHHhcCceEEEEecccccCCccccchhhhhhhcCCeEEE
Q 006965          236 SAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQAPLAIV  315 (623)
Q Consensus       236 d~Vai~~~~s~~~vva~LA~~~aGa~~vpldp~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (623)
                      ++|+|+++||+++++++|||+|+|++||||||.+|.+|+.+++++++++++|++.........++.        ....+.
T Consensus       515 ~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~--------~~~~~~  586 (1304)
T 2vsq_A          515 SVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELPY--------TGTTLF  586 (1304)
T ss_dssp             CEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCCC--------CSEEEE
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccCC--------CCcEEE
Confidence            999999999999999999999999999999999999999999999999999998754321111110        011111


Q ss_pred             EcCCCCCcccccCCCCccHHHHHHhhhcccccccccccCCCCCeEEEEecCCCCCCceEEEeCCchHHHHHHHHHHhcCC
Q 006965          316 IPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDI  395 (623)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~l  395 (623)
                      +..            ...+       .  .....+.....++++|||+|||||||+||||+++|+++.+. .+....+++
T Consensus       587 ~~~------------~~~~-------~--~~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~  644 (1304)
T 2vsq_A          587 IDD------------QTRF-------E--EQASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAF  644 (1304)
T ss_dssp             SSC------------GGGG-------G--SCSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCC
T ss_pred             ecc------------cccc-------c--cccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCC
Confidence            110            0000       0  00111223456899999999999999999999999999876 455567889


Q ss_pred             CCCCEEEEcCCCcccchHHHHHHHHHhCCeEEEeCC--CCChhhHHHHHHHcCCcEEEechHHHHHHHhcCcCCCCCCcc
Q 006965          396 RKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG--SPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSS  473 (623)
Q Consensus       396 ~~~d~~l~~~~l~~~~~~~~~~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~  473 (623)
                      +++|+++++++++|+.+++++|.+|+.|+++++.+.  ..++..+.+.|++++||++.++|++++.|.+..   ...+++
T Consensus       645 ~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~  721 (1304)
T 2vsq_A          645 SDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMKG  721 (1304)
T ss_dssp             CTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHHT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCCC
Confidence            999999999999999999999999999999999875  358899999999999999999999999998753   223678


Q ss_pred             ceEEEeecCCCCHHHHHHHHhccCCCCeeecccccccccccccCCcc---ccCccCccCCCCCCcEEEEEcCCCCcCCCC
Q 006965          474 IRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL---QAQSLAAFSTPAMGCKLFILGNDGCPIPQN  550 (623)
Q Consensus       474 Lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~Vld~~~~~vp~G  550 (623)
                      ||.+++|||++++++.+++.+.++.++++|.||+||++++++.....   ......++|+|++|++++|+|++++++|.|
T Consensus       722 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G  801 (1304)
T 2vsq_A          722 LRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPFG  801 (1304)
T ss_dssp             CSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCTT
T ss_pred             ccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCCC
Confidence            99999999999999999998888878999999999999865543322   123456899999999999999999999999


Q ss_pred             CCceeEEEE-eCccCCCCccccccccccccccccccCCCceeEEecceEEEecCCcEEEEcccCCeeecCceeC
Q 006965          551 VPGMGELAL-SPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV  623 (623)
Q Consensus       551 ~~giGel~i-~~~~~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDlg~~~~dG~l~~~GR~dd~iki~G~rI  623 (623)
                      ++  |||+| |++...|  |+++|++|+++|+.+|+.+|+|||||||+|||++||+|+|+||+|||||+||+||
T Consensus       802 ~~--GEl~i~G~~v~~G--Y~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~ri  871 (1304)
T 2vsq_A          802 AV--GELCISGMGVSKG--YVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRI  871 (1304)
T ss_dssp             CC--EEEEEEETTCCCC--BTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEE
T ss_pred             Cc--eEEEEeccccCcc--ccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEee
Confidence            97  99999 6666665  6678999999999999988999999999999999999999999999999999997
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 623
d1pg4a_ 643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 2e-67
d1ry2a_ 640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 4e-56
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 9e-34
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 2e-28
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 7e-27
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 2e-23
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 4e-20
d1gkub2248 c.37.1.16 (B:251-498) Helicase-like "domain" of re 8e-04
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  229 bits (586), Expect = 2e-67
 Identities = 138/517 (26%), Positives = 221/517 (42%), Gaps = 35/517 (6%)

Query: 124 EFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCL 183
           + S+++P+ +W          +  P Q +     N      N   +W     +N A NCL
Sbjct: 25  KQSINDPDTFWGEQGKI--LDWITPYQKVK----NTSFAPGNVSIKWYEDGTLNLAANCL 78

Query: 184 SVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMP 243
             + + + D   I W  EGD     K ++ +EL  +V   A  L  LG+ KG  +AI MP
Sbjct: 79  DRHLQENGDRTAIIW--EGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMP 136

Query: 244 MNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYS 303
           M   + V  LA    G +   I   F+   ++  +  S ++ + T D  +R  +SIPL  
Sbjct: 137 MVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKK 196

Query: 304 RVIDAQA-----PLAIVIPAKGSSFSMKLRDG-DISWLDFLERVRKLKENEFAAVEQPVE 357
            V DA        +  VI  K +   +  ++G D+ W D +E+     + E    E P+ 
Sbjct: 197 NVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPL- 255

Query: 358 AFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH-MDIRKADIVAWPTNLGWMMG-PWL 415
               IL++SG+TG+PK +  T       AA  + +  D    DI     ++GW+ G  +L
Sbjct: 256 ---FILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYL 312

Query: 416 VYASLLNGASIALYNGSPL---GSGFAKFVQDAKVTMLGVVPSIVRTWKSTN--CIDGYD 470
           +Y  L  GA+  ++ G P     +   + V   +V +L   P+ +R   +     I+G D
Sbjct: 313 LYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTD 372

Query: 471 WSSIRCFGSTGEASNVDEYLWLMGR--ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAF 528
            SS+R  GS GE  N + + W   +      PV++    TE  GGF+   L  A  L A 
Sbjct: 373 RSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTET-GGFMITPLPGAIELKAG 431

Query: 529 S--TPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSR 586
           S   P  G +  ++ N+G P        G L ++    G + TL         F      
Sbjct: 432 SATRPFFGVQPALVDNEGHPQEGATE--GNLVITDSWPGQARTLFG---DHERFEQTYFS 486

Query: 587 NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV 623
             + +   GD   R   GYY   GR DD +N+ G ++
Sbjct: 487 TFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRL 523
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 248 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query623
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_ 640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1l5aa2250 VibH {Vibrio cholerae [TaxId: 666]} 97.92
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 88.48
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 86.32
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 81.67
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 80.56
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=7.5e-74  Score=640.38  Aligned_cols=489  Identities=26%  Similarity=0.409  Sum_probs=395.1

Q ss_pred             CCChHHHHHHHhhCHHHHHHHHHHhcCCccccCCcccccCCCCCCCCCCCCCCccCCCCcccHHhhhhccccCCCCCCeE
Q 006965          116 ISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIV  195 (623)
Q Consensus       116 ~~~~~~f~~~tv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~pd~~A  195 (623)
                      +++|+.+++++|++++.||..+++.+  .|.++++++++....    ......+||+++.+|+++++|+++++.+||++|
T Consensus        17 ~~~y~~l~~~s~~~~~~fW~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~wf~~~~~N~~~n~ldrh~~~~~d~~A   90 (643)
T d1pg4a_          17 PEQYETKYKQSINDPDTFWGEQGKIL--DWITPYQKVKNTSFA----PGNVSIKWYEDGTLNLAANCLDRHLQENGDRTA   90 (643)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHGGGS--CCSBCCSCCEEEECC----TTCCEEEESTTCEECHHHHHTGGGHHHHTTSEE
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHhhe--eEECCCcccccCccC----CCCCCCeeCCCChhhHHHHHHHHHHHhCCCCEE
Confidence            34779999999999999999999874  788888988876431    123356899999999999999999999999999


Q ss_pred             EEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHH
Q 006965          196 IRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEIS  275 (623)
Q Consensus       196 l~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~LA~~~aGa~~vpldp~~~~~~l~  275 (623)
                      +++.+.  +.+..+++||+||.++++++|++|+++||++||+|+++++|++++++++|||+++|++++|++|.++.+++.
T Consensus        91 li~~~~--~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~  168 (643)
T d1pg4a_          91 IIWEGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVA  168 (643)
T ss_dssp             EEEECS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHH
T ss_pred             EEEEec--CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHH
Confidence            998754  345667999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCceEEEEecccccCCccccchhhhhhhcC-------CeEEEEcCCCCCcccccCCCCccHHHHHHhhhcccccc
Q 006965          276 ARLRISKAKAIFTQDLIIRGDKSIPLYSRVIDAQA-------PLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENE  348 (623)
Q Consensus       276 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (623)
                      +++++++++++|+++......+..+....+...+.       ..++++...+...... ......+.+......    ..
T Consensus       169 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~  243 (643)
T d1pg4a_         169 GCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQ-EGRDLWWRDLIEKAS----PE  243 (643)
T ss_dssp             HHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCC-BTTEEEHHHHHTTSC----SC
T ss_pred             HHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCcccccc-cccchhhhhhhcccC----cc
Confidence            99999999999999887776666665555444321       2344444332221111 112233333333222    23


Q ss_pred             cccccCCCCCeEEEEecCCCCCCceEEEeCCchHHH-HHHHHHHhcCCCCCCEEEEcCCCcccchHH-HHHHHHHhCCeE
Q 006965          349 FAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFK-AAADAWCHMDIRKADIVAWPTNLGWMMGPW-LVYASLLNGASI  426 (623)
Q Consensus       349 ~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~l~~~d~~l~~~~l~~~~~~~-~~~~~L~~G~~l  426 (623)
                      .++...+++|+++|+|||||||+||||+++|++++. ........++++++|++++.+|++|++++. .++++|++|+++
T Consensus       244 ~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~  323 (643)
T d1pg4a_         244 HQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATT  323 (643)
T ss_dssp             CCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEE
T ss_pred             cCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEE
Confidence            344556789999999999999999999999999654 455556678999999999999999999975 478999999999


Q ss_pred             EEeCCC---CChhhHHHHHHHcCCcEEEechHHHHHHHhcCc--CCCCCCccceEEEeecCCCCHHHHHHHHhccC--CC
Q 006965          427 ALYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMGRAL--YK  499 (623)
Q Consensus       427 vl~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~v~~gGe~l~~~~~~~~~~~~~--~~  499 (623)
                      +++++.   +++..++++|++++||++.++|+++++|++...  ....++++||.+++||+++++++++++.+.++  ++
T Consensus       324 vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~  403 (643)
T d1pg4a_         324 LMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKC  403 (643)
T ss_dssp             EEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCS
T ss_pred             EEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCc
Confidence            998753   478899999999999999999999999987643  34667999999999999999999999998875  57


Q ss_pred             CeeecccccccccccccCCc-cccCccCccCCCCCCcEEEEEcCCCCcCCCCCCceeEEEEeCccCCCCcccc-cccccc
Q 006965          500 PVIEYCGGTEIGGGFITGSL-LQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLL-NANHYD  577 (623)
Q Consensus       500 ~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~Vld~~~~~vp~G~~giGel~i~~~~~~~~~~~~-~~~~t~  577 (623)
                      +++|.||+||+++.++...+ ..+.+.+++|+|++|++++|+|++|++++.|+.  |||+|...+.+...+|+ +++.+.
T Consensus       404 ~i~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~~--Gel~v~~~~p~~~~~~~~~~~~~~  481 (643)
T d1pg4a_         404 PVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATE--GNLVITDSWPGQARTLFGDHERFE  481 (643)
T ss_dssp             CEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSEE--EEEEECSCCTTCCCEETTCHHHHH
T ss_pred             eEEEeechhhccceEEecCCCccCCCCCccccccCCCEEEEECCCCCCCCCCce--EEEEEecCCCcccccccCChhhch
Confidence            89999999999876554433 234567899999999999999999999999986  99999543333222333 444443


Q ss_pred             ccccccccCCCceeEEecceEEEecCCcEEEEcccCCeeecCceeC
Q 006965          578 VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV  623 (623)
Q Consensus       578 ~~f~~~p~~~g~~~yrTGDlg~~~~dG~l~~~GR~dd~iki~G~rI  623 (623)
                      +.|.    ....+||+|||+|++|+||+|+|+||+||+||++|+||
T Consensus       482 ~~~~----~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri  523 (643)
T d1pg4a_         482 QTYF----STFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRL  523 (643)
T ss_dssp             HHHH----SSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEE
T ss_pred             hhhc----ccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEE
Confidence            3222    12344999999999999999999999999999999997
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure