Citrus Sinensis ID: 006966

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620---

MAKAASKYFFLFLFNILTISSSATLVGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPVPPDNKPTPTIVTVPATNPVTVSPANPSGTPLPIPSTTPVNIPPATPVNPAAPVTNPATIPAPVTVPGGAQPVTNPAAAYPPPAGGNVPVPVTPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPSTGSCVFPSSSSSSSSSAPPSPPTSALTPPAQPSSTTPPATTTAPPGTTTSPPGTTTSPPVTTSPAPGTSGSVAPPGVLNSSNPASGFGSDSPPVVNTSTSAGSQLILSSLTLVTPFVIRLIIQQI

cHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHccccccccccccEEEEcccHHHHHHHHHcccccEEEEEcccccHHHHHHHccHHHHHHHHHHHcccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccHHHHHHHHHHHccccEEEEcccccccccccccccccEEcccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc

ccHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHHcccEEcccEccEEEEEcccHHHHcHHHHHccccEEEEEEEcccHHHHHHHccHHHHHHHHHHHcHcccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHccccccccccHHHHHHHHHHccccEEEEccccccccEEEEccccccccccccEEEccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccEEEEEEEEcccccccccccccccccEcccccEEEEEccccccccccccccccccccccccccccEccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccEEEEccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHcHHHHHHHHHcc

MAKAASKYFFLFLFNILTISSSATLVGFafngrentsaasstsevtsfdslglkldnvpsqrIRVYVANHRVLNFSSLlnsnasssvDLYLNLSLVVDLMQSELSAISWLETNvltthphvnIKSIILScsseefegknvLPLILSALKSFHSALNRIHLDMKVKvsvafplpllenlntshegeIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKAtsilpdsdilidlvmksplvpdakQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLktsihdttifpttpvppdnkptptivtvpatnpvtvspanpsgtplpipsttpvnippatpvnpaapvtnpatipapvtvpggaqpvtnpaaaypppaggnvpvpvtpptttnapaipgqswcvakngvSETAIQQALDYAcgiggadcsliqqgascynpntlqnhasfafnsyyqknpsptscdfggtamivntnpstgscvfpsssssssssappspptsaltppaqpssttppatttappgtttsppgtttsppvttspapgtsgsvappgvlnssnpasgfgsdsppvvntstsagsqLILSSLTLVTPFVIRLIIQQI

MAKAASKYFFLFLFNILTISSSATLVGFAFNGREntsaasstsevtsfdslglkldnvpSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLktsihdttifpttpvppdnkPTPTIVTVPATNPVTVSPANPSGTPLPIPSTTPVNIPPATPVNPAAPVTNPATIPAPVTVPGGAQPVTNPAAAYPPPAGGNVPVPVTPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPSTGSCVFPSSSSSSSSSAPPSPPTSALTPPAQpssttppatttappgtttsppgtttspPVTTSPAPGTSGSVAPPGVLNSSNPASGFGSDSPPVVNTSTSAGSQLIlssltlvtpfVIRLIIQQI

MAKAASKYFFLFLFNILTISSSATLVGFAFNGRENtsaasstsEVTSFDSLGLKLDNVPSQRIRVYVANHRVlnfssllnsnasssVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPVPPDNKPTPTIVTVPATNPVTVSPANPSGTPLPIPSttpvnippatpvnpaapvtnpatipapvtvpGGAQpvtnpaaaypppaggnvpvpvtpptttnapaipgQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPSTGSCVFpsssssssssappspptsaltppaqpssttppatttappgtttsppgtttsppvttspapgtsgsVAPPGVLNSSNPASGFGSDSPPVVNTSTSAGSQLILSSLTLVTPFVIRLIIQQI

******KYFFLFLFNILTISSSATLVGFAFNG*****************SLGLKLDNVPSQRIRVYVANHRVLNFSS************YLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIF**********************************************************************************************************IPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKN***TSCDFGGTAMIVN***********************************************************************************************************QLILSSLTLVTPFVIRLII***

*****SK*FFLFLFNILTISSSATLVGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVR**QNSLKTSIHDTTIFPTTPVPPDNKPTPTIVTVPATN*****************STTPVNIPPATPVNPAAPVTN**********************AYPPPAGGNVPVPVTPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPSTGSCV********************************************************************************************STSAGSQLILSSLTLVTPFVIRLIIQQI

MAKAASKYFFLFLFNILTISSSATLVGFAFNGRE**************DSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPVPPDNKPTPTIVTVPATNPVTVSPANPSGTPLPIPSTTPVNIPPATPVNPAAPVTNPATIPAPVTVPGGAQPVTNPAAAYPPPAGGNVPVPVTPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPST********************************************************************GSVAPPGVLNSSNPASGFGSDSPPVVNTSTSAGSQLILSSLTLVTPFVIRLIIQQI

*AKAASKYFFLFLFNILTISSSATLVGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSHEGEIGLIFGYIKKTGSVVIIEAGIDGKLSMAEVLVQPLLKKAIKATSILPDSDILIDLVMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPVPPDNKPTPTIVTVPATNPVTVSPANPSGTPLPIPSTTPVNIPPATPV************PAPVTVPGGAQPVTNPAAAYPPPAGGNVPVPVTPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPSTGSCVFPSSSS**********************************GT*T*********************************************VNTSTSAGSQLILSSLTLVTPFVIRLIIQQI

iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiii

SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooo

SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiii

SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		623	2.2.26 [Sep-21-2011]
O65399		511	Glucan endo-1,3-beta-gluc	no	no	0.142	0.174	0.577	1e-25
Q9ZU91		501	Glucan endo-1,3-beta-gluc	no	no	0.264	0.329	0.375	1e-23
Q9C7U5		505	Glucan endo-1,3-beta-gluc	no	no	0.142	0.176	0.466	1e-19
Q9M2K6		180	Glucan endo-1,3-beta-gluc	no	no	0.147	0.511	0.462	3e-19
P52409		461	Glucan endo-1,3-beta-gluc	N/A	no	0.139	0.188	0.455	4e-19
Q9M069		504	Glucan endo-1,3-beta-gluc	no	no	0.134	0.166	0.476	5e-19
Q9FNQ2		201	Glucan endo-1,3-beta-gluc	no	no	0.194	0.601	0.456	9e-19
Q9FJU9		506	Glucan endo-1,3-beta-gluc	no	no	0.171	0.211	0.388	2e-18
Q8VYE5		534	Glucan endo-1,3-beta-gluc	no	no	0.138	0.161	0.436	2e-17
Q94G86		460	Glucan endo-1,3-beta-D-gl	N/A	no	0.142	0.193	0.483	3e-17

>sp\|O65399\|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3	Back alignment and function desciption

 Score =  119 bits (297), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 1/90 (1%)

Query: 419 QSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKN 478
           Q++C+A +GV    +Q ALD+ACG G ++CS IQ G SCY PN ++ HASFAFNSYYQK 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 479 PSPT-SCDFGGTAMIVNTNPSTGSCVFPSS 507
              + SCDF G AMI  T+PS GSC+FP S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGS 468

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9

>sp\|Q9ZU91\|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2	Back alignment and function description

>sp\|Q9C7U5\|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2	Back alignment and function description

>sp\|Q9M2K6\|E13L1_ARATH Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2	Back alignment and function description

>sp\|P52409\|E13B_WHEAT Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	Back alignment and function description

>sp\|Q9M069\|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2	Back alignment and function description

>sp\|Q9FNQ2\|E13L2_ARATH Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1	Back alignment and function description

>sp\|Q9FJU9\|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1	Back alignment and function description

>sp\|Q8VYE5\|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1	Back alignment and function description

>sp\|Q94G86\|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		623
224124934		615	predicted protein [Populus trichocarpa]	0.914	0.926	0.510	1e-147
356533523		611	PREDICTED: uncharacterized protein LOC10	0.876	0.893	0.483	1e-119
356574072		608	PREDICTED: uncharacterized protein LOC10	0.873	0.894	0.474	1e-113
147780244		519	hypothetical protein VITISV_037753 [Viti	0.585	0.703	0.544	1e-105
255543020		406	hydrolase, hydrolyzing O-glycosyl compou	0.603	0.926	0.557	2e-99
356503992		538	PREDICTED: uncharacterized protein LOC10	0.659	0.763	0.464	3e-98
356571046		529	PREDICTED: uncharacterized protein LOC10	0.662	0.780	0.460	9e-93
449435582		363	PREDICTED: uncharacterized protein LOC10	0.454	0.779	0.529	3e-64
357441929		428	hypothetical protein MTR_1g084820, parti	0.611	0.890	0.424	1e-60
407948010		367	beta-1,3-glucanase 27 [Solanum tuberosum	0.478	0.811	0.447	1e-50

>gi\|224124934\|ref\|XP_002319461.1\| predicted protein [Populus trichocarpa] gi\|222857837\|gb\|EEE95384.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 341/668 (51%), Positives = 428/668 (64%), Gaps = 98/668 (14%)

Query: 1   MAKAASKYFFLFLFNILTISSSATLVGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPS 60
           MA  ASK  FLF  ++LTISSS TLVGF++N R   +AASS S   SF    L+L+ V +
Sbjct: 1   MAGVASKCLFLFFLSLLTISSSGTLVGFSYNAR-GITAASSLSRTVSF----LELNKVFA 55

Query: 61  QRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPH 120
             +RV+ ++H+VL  S+L N N S  VDLYL+ SLV +L+ S+ SAISW +T ++T  PH
Sbjct: 56  SHLRVFASDHKVL--SALSNFNVS--VDLYLDDSLVENLINSKPSAISWFKTLLVTFLPH 111

Query: 121 VNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNT 180
           VNIKSII+S       G N LP +L  LKS HS LNR H+D +VKVSVAF L  LENL+ 
Sbjct: 112 VNIKSIIVS-------GNNDLPKLLYTLKSIHSVLNRFHVDSEVKVSVAFSLSFLENLDR 164

Query: 181 SHEGEIGLIFGYIKKTGSVVIIEAG--IDGKLSMAEVLVQPLLKKAIKATSILPDSDILI 238
           + E ++  I G IK+T S V +E    +D +L M ++ +Q +++K   ATS+L   D+LI
Sbjct: 165 TQENDLHGILGSIKRTKSFVTVETSLDVDVELGMKDLFIQSMIQKVTAATSLLSPYDVLI 224

Query: 239 DLVMKSPLVPDAKQVAEFTEIVSKFFENNS---QIDELYADVASSMGEFVQKGLKV---- 291
            + ++S +VP AK+VAEF E VSK  EN+    Q+  LYA+V SS+ +F++K LK     
Sbjct: 225 AMTIRSLVVPGAKEVAEFAEKVSKSLENSKITGQVAGLYAEV-SSVEDFMEKELKREHEQ 283

Query: 292 -----VRRLQNSLKTSIHDT-----TIFPTTP--VPPD----NKPTPTIVTVPATNP--- 332
                 R L  + +T++HD      T+FPT P   PP     + P PTIVTVPATNP   
Sbjct: 284 IFPSSRRELLTNFRTTLHDDIINTPTVFPTNPGSTPPGTLLPDTPAPTIVTVPATNPANP 343

Query: 333 VTVSPANPSGTPLPIPSTTPVNIPPATP-VNPAAPVTNPATIPAPVTVPGGAQPVTNPAA 391
           VTV+P NP  TPLP P TTPV+ PPA P VNP  P++NP T PAP+TVPG AQPVTNP  
Sbjct: 344 VTVTPTNPVSTPLPFPYTTPVDFPPANPSVNPPVPISNPVTTPAPITVPG-AQPVTNPVT 402

Query: 392 AYPPPAGGNVPV------PVTPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGG 445
            YP P G NVPV      PV PP TTNAPAIPGQSWCVA++GV+ETA+Q ALDYACG+GG
Sbjct: 403 TYPAPTG-NVPVTAPVTNPVAPPATTNAPAIPGQSWCVARSGVTETALQSALDYACGMGG 461

Query: 446 ADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNPSPTSCDFGGTAMIVNTNPS------- 498
           ADCS IQQG +CYNPN+LQNHASFAFNSY+QKNP+ TSCDFGGTA IVN NP+       
Sbjct: 462 ADCSQIQQGGNCYNPNSLQNHASFAFNSYFQKNPAATSCDFGGTATIVNVNPNSHNIETG 521

Query: 499 TGSCVFPSSSSSSSSSAPPSPPTSALTPPAQPSSTTPPATTTAPPGTTTSPPGTTTSPPV 558
           TGSC++P+SSSSS + + P+P TS+                                 P 
Sbjct: 522 TGSCIYPTSSSSSGTPSLPAPTTSSAN-------------------------------PA 550

Query: 559 TTSPAPGTSGSVAPPGVLNSS-NPASGFGSDSPPVVN--TSTSAGSQLILSSLTLVTPFV 615
           TTSP  G SG+   P VLNSS NPAS FG D+PP++N   S SA  Q  +    LVT FV
Sbjct: 551 TTSPVVGVSGT---PSVLNSSTNPASSFGFDTPPILNPPASMSANLQPFIGCAILVTSFV 607

Query: 616 IRLIIQQI 623
            R II  +
Sbjct: 608 ARTIILDM 615

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356533523\|ref\|XP_003535313.1\| PREDICTED: uncharacterized protein LOC100794910 [Glycine max]	Back alignment and taxonomy information

>gi\|356574072\|ref\|XP_003555176.1\| PREDICTED: uncharacterized protein LOC100781884 [Glycine max]	Back alignment and taxonomy information

>gi\|147780244\|emb\|CAN65737.1\| hypothetical protein VITISV_037753 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255543020\|ref\|XP_002512573.1\| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi\|223548534\|gb\|EEF50025.1\| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356503992\|ref\|XP_003520783.1\| PREDICTED: uncharacterized protein LOC100809473 [Glycine max]	Back alignment and taxonomy information

>gi\|356571046\|ref\|XP_003553692.1\| PREDICTED: uncharacterized protein LOC100789503 [Glycine max]	Back alignment and taxonomy information

>gi\|449435582\|ref\|XP_004135574.1\| PREDICTED: uncharacterized protein LOC101217178 [Cucumis sativus] gi\|449510824\|ref\|XP_004163771.1\| PREDICTED: uncharacterized LOC101217178 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|357441929\|ref\|XP_003591242.1\| hypothetical protein MTR_1g084820, partial [Medicago truncatula] gi\|355480290\|gb\|AES61493.1\| hypothetical protein MTR_1g084820, partial [Medicago truncatula]	Back alignment and taxonomy information

>gi\|407948010\|gb\|AFU52660.1\| beta-1,3-glucanase 27 [Solanum tuberosum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		623
TAIR\|locus:2012355		330	AT1G09460 "AT1G09460" [Arabido	0.134	0.254	0.744	6e-49
TAIR\|locus:1009023225		227	AT2G30933 "AT2G30933" [Arabido	0.138	0.378	0.686	2.2e-36
TAIR\|locus:2013728		315	AT1G29380 "AT1G29380" [Arabido	0.134	0.266	0.654	6.9e-32
TAIR\|locus:2158571		380	AT5G67460 [Arabidopsis thalian	0.134	0.221	0.517	9.3e-30
TAIR\|locus:2056519		472	AT2G05790 [Arabidopsis thalian	0.136	0.180	0.569	8.4e-27
TAIR\|locus:2116327		455	AT4G26830 [Arabidopsis thalian	0.136	0.186	0.546	5.6e-26
TAIR\|locus:2065403		501	AT2G01630 [Arabidopsis thalian	0.138	0.171	0.494	1.1e-24
TAIR\|locus:2118339		534	AT4G29360 [Arabidopsis thalian	0.138	0.161	0.436	1e-23
TAIR\|locus:2161710		465	AT5G55180 [Arabidopsis thalian	0.128	0.172	0.567	2.9e-23
TAIR\|locus:2205298		505	AT1G66250 [Arabidopsis thalian	0.138	0.170	0.471	3e-23

TAIR\|locus:2012355 AT1G09460 "AT1G09460" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 363 (132.8 bits), Expect = 6.0e-49, Sum P(4) = 6.0e-49
 Identities = 64/86 (74%), Positives = 75/86 (87%)

Query:   419 QSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKN 478
             QSWCVAK G S+ ++QQALDYACGI  ADCS +QQG +CY+P +LQ+HASFAFNSYYQKN
Sbjct:   135 QSWCVAKPGASQVSLQQALDYACGI--ADCSQLQQGGNCYSPISLQSHASFAFNSYYQKN 192

Query:   479 PSPTSCDFGGTAMIVNTNPSTGSCVF 504
             PSP SCDFGG A +VNTNPSTGSC++
Sbjct:   193 PSPQSCDFGGAASLVNTNPSTGSCIY 218

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR\|locus:1009023225 AT2G30933 "AT2G30933" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2013728 AT1G29380 "AT1G29380" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2158571 AT5G67460 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2065403 AT2G01630 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2205298 AT1G66250 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.39	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		623
smart00768		85	smart00768, X8, Possibly involved in carbohydrate	2e-43
pfam07983		77	pfam07983, X8, X8 domain	2e-25
PHA03247		3151	PHA03247, PHA03247, large tegument protein UL36; P	6e-12
PHA03307		1352	PHA03307, PHA03307, transcriptional regulator ICP4	4e-11
PHA03247		3151	PHA03247, PHA03247, large tegument protein UL36; P	7e-10
PRK14950		585	PRK14950, PRK14950, DNA polymerase III subunits ga	4e-09
PHA03247		3151	PHA03247, PHA03247, large tegument protein UL36; P	6e-09
PHA03247		3151	PHA03247, PHA03247, large tegument protein UL36; P	6e-08
PHA03307		1352	PHA03307, PHA03307, transcriptional regulator ICP4	2e-06
PRK12323		700	PRK12323, PRK12323, DNA polymerase III subunits ga	4e-06
PRK12323		700	PRK12323, PRK12323, DNA polymerase III subunits ga	7e-06
PRK14951		618	PRK14951, PRK14951, DNA polymerase III subunits ga	7e-06
pfam05109		830	pfam05109, Herpes_BLLF1, Herpes virus major outer	8e-06
PHA03291		401	PHA03291, PHA03291, envelope glycoprotein I; Provi	1e-05
PRK12495		226	PRK12495, PRK12495, hypothetical protein; Provisio	2e-05
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	3e-05
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	4e-05
PRK14950		585	PRK14950, PRK14950, DNA polymerase III subunits ga	5e-05
PRK14951		618	PRK14951, PRK14951, DNA polymerase III subunits ga	5e-05
PRK07003		830	PRK07003, PRK07003, DNA polymerase III subunits ga	6e-05
PRK12323		700	PRK12323, PRK12323, DNA polymerase III subunits ga	8e-05
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	9e-05
PRK12323		700	PRK12323, PRK12323, DNA polymerase III subunits ga	1e-04
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	1e-04
PRK14954		620	PRK14954, PRK14954, DNA polymerase III subunits ga	1e-04
pfam04652		315	pfam04652, DUF605, Vta1 like	1e-04
PRK14951		618	PRK14951, PRK14951, DNA polymerase III subunits ga	2e-04
pfam04652		315	pfam04652, DUF605, Vta1 like	2e-04
TIGR00601		378	TIGR00601, rad23, UV excision repair protein Rad23	2e-04
PRK14951		618	PRK14951, PRK14951, DNA polymerase III subunits ga	3e-04
pfam04652		315	pfam04652, DUF605, Vta1 like	3e-04
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	3e-04
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	4e-04
PRK14971		614	PRK14971, PRK14971, DNA polymerase III subunits ga	4e-04
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	4e-04
PRK10811		1068	PRK10811, rne, ribonuclease E; Reviewed	4e-04
PRK14951		618	PRK14951, PRK14951, DNA polymerase III subunits ga	5e-04
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	6e-04
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	6e-04
PRK07764		824	PRK07764, PRK07764, DNA polymerase III subunits ga	6e-04
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	7e-04
TIGR00601		378	TIGR00601, rad23, UV excision repair protein Rad23	8e-04
PRK14971		614	PRK14971, PRK14971, DNA polymerase III subunits ga	8e-04
pfam03153		332	pfam03153, TFIIA, Transcription factor IIA, alpha/	8e-04
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	0.001
PRK14971		614	PRK14971, PRK14971, DNA polymerase III subunits ga	0.001
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	0.001
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	0.001
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	0.001
pfam06112		148	pfam06112, Herpes_capsid, Gammaherpesvirus capsid	0.001
PLN02217		670	PLN02217, PLN02217, probable pectinesterase/pectin	0.001
PHA03378		991	PHA03378, PHA03378, EBNA-3B; Provisional	0.001
PHA03378		991	PHA03378, PHA03378, EBNA-3B; Provisional	0.001
pfam03276		582	pfam03276, Gag_spuma, Spumavirus gag protein	0.001
PHA03307		1352	PHA03307, PHA03307, transcriptional regulator ICP4	0.002
PRK14951		618	PRK14951, PRK14951, DNA polymerase III subunits ga	0.002
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	0.002
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	0.002
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	0.002
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	0.002
PTZ00436		357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	0.002
PRK07764		824	PRK07764, PRK07764, DNA polymerase III subunits ga	0.002
PRK07764		824	PRK07764, PRK07764, DNA polymerase III subunits ga	0.002
PRK14959		624	PRK14959, PRK14959, DNA polymerase III subunits ga	0.002
PRK07994		647	PRK07994, PRK07994, DNA polymerase III subunits ga	0.002
pfam06070		777	pfam06070, Herpes_UL32, Herpesvirus large structur	0.002
pfam07174		297	pfam07174, FAP, Fibronectin-attachment protein (FA	0.002
PHA03201		318	PHA03201, PHA03201, uracil DNA glycosylase; Provis	0.002
pfam04652		315	pfam04652, DUF605, Vta1 like	0.003
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	0.003
PRK14971		614	PRK14971, PRK14971, DNA polymerase III subunits ga	0.003
PLN02217		670	PLN02217, PLN02217, probable pectinesterase/pectin	0.003
PHA03378		991	PHA03378, PHA03378, EBNA-3B; Provisional	0.003
pfam01034		207	pfam01034, Syndecan, Syndecan domain	0.003
PRK10856		331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	0.004
PRK07764		824	PRK07764, PRK07764, DNA polymerase III subunits ga	0.004
PLN02217		670	PLN02217, PLN02217, probable pectinesterase/pectin	0.004
PRK13335		356	PRK13335, PRK13335, superantigen-like protein; Rev	0.004

>gnl\|CDD\|197867 smart00768, X8, Possibly involved in carbohydrate binding	Back alignment and domain information

 Score =  150 bits (380), Expect = 2e-43
 Identities = 55/86 (63%), Positives = 63/86 (73%), Gaps = 2/86 (2%)

Query: 420 SWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQKNP 479
            WCVAK    E A+Q ALDYACG G ADC+ IQ G SCY+PNT++ HAS+AFNSYYQK  
Sbjct: 1   LWCVAKPDADEAALQAALDYACGQG-ADCTAIQPGGSCYSPNTVKAHASYAFNSYYQKQG 59

Query: 480 -SPTSCDFGGTAMIVNTNPSTGSCVF 504
            S  +CDF GTA I  T+PSTGSC F
Sbjct: 60  QSSGACDFSGTATITTTDPSTGSCKF 85

The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. Length = 85

>gnl\|CDD\|219681 pfam07983, X8, X8 domain	Back alignment and domain information

>gnl\|CDD\|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional	Back alignment and domain information

>gnl\|CDD\|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	Back alignment and domain information

>gnl\|CDD\|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional	Back alignment and domain information

>gnl\|CDD\|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional	Back alignment and domain information

>gnl\|CDD\|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional	Back alignment and domain information

>gnl\|CDD\|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	Back alignment and domain information

>gnl\|CDD\|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)	Back alignment and domain information

>gnl\|CDD\|223033 PHA03291, PHA03291, envelope glycoprotein I; Provisional	Back alignment and domain information

>gnl\|CDD\|183558 PRK12495, PRK12495, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|184918 PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|218191 pfam04652, DUF605, Vta1 like	Back alignment and domain information

>gnl\|CDD\|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|218191 pfam04652, DUF605, Vta1 like	Back alignment and domain information

>gnl\|CDD\|233045 TIGR00601, rad23, UV excision repair protein Rad23	Back alignment and domain information

>gnl\|CDD\|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|218191 pfam04652, DUF605, Vta1 like	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|236766 PRK10811, rne, ribonuclease E; Reviewed	Back alignment and domain information

>gnl\|CDD\|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|233045 TIGR00601, rad23, UV excision repair protein Rad23	Back alignment and domain information

>gnl\|CDD\|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|147982 pfam06112, Herpes_capsid, Gammaherpesvirus capsid protein	Back alignment and domain information

>gnl\|CDD\|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor	Back alignment and domain information

>gnl\|CDD\|223065 PHA03378, PHA03378, EBNA-3B; Provisional	Back alignment and domain information

>gnl\|CDD\|223065 PHA03378, PHA03378, EBNA-3B; Provisional	Back alignment and domain information

>gnl\|CDD\|217469 pfam03276, Gag_spuma, Spumavirus gag protein	Back alignment and domain information

>gnl\|CDD\|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	Back alignment and domain information

>gnl\|CDD\|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|184923 PRK14959, PRK14959, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|218881 pfam06070, Herpes_UL32, Herpesvirus large structural phosphoprotein UL32	Back alignment and domain information

>gnl\|CDD\|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP)	Back alignment and domain information

>gnl\|CDD\|165468 PHA03201, PHA03201, uracil DNA glycosylase; Provisional	Back alignment and domain information

>gnl\|CDD\|218191 pfam04652, DUF605, Vta1 like	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

>gnl\|CDD\|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor	Back alignment and domain information

>gnl\|CDD\|223065 PHA03378, PHA03378, EBNA-3B; Provisional	Back alignment and domain information

>gnl\|CDD\|216257 pfam01034, Syndecan, Syndecan domain	Back alignment and domain information

>gnl\|CDD\|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional	Back alignment and domain information

>gnl\|CDD\|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor	Back alignment and domain information

>gnl\|CDD\|139494 PRK13335, PRK13335, superantigen-like protein; Reviewed	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		623
PF00332		310	Glyco_hydro_17: Glycosyl hydrolases family 17; Int	100.0
smart00768		85	X8 Possibly involved in carbohydrate binding. The	99.95
PF07983		78	X8: X8 domain; InterPro: IPR012946 The X8 domain [	99.86
PF00332		310	Glyco_hydro_17: Glycosyl hydrolases family 17; Int	99.14
COG5309		305	Exo-beta-1,3-glucanase [Carbohydrate transport and	98.58
PF03198		314	Glyco_hydro_72: Glucanosyltransferase; InterPro: I	94.48
KOG0260		1605	consensus RNA polymerase II, large subunit [Transc	83.0

>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3	Back alignment and domain information

Probab=100.00  E-value=8.2e-65  Score=531.99  Aligned_cols=284  Identities=23%  Similarity=0.270  Sum_probs=217.3

Q ss_pred             eeEeccCCCCCCCCCChhhhhccCccccccCCCCCCcEEEecCCccccchhhhcCCCceEEEecccCchhHHHhhcChHH
Q 006966           26 VGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELS  105 (623)
Q Consensus        26 iGVnYG~~gdnL~lPsP~~vv~l~~~~lk~~~i~~~~VRiyDadp~vL~~~AlanTgI~v~V~v~vpN~~i~~la~s~~~  105 (623)
                      |||||||+||||  |+|.+||+|    ||+++|  +||||||+|+++||  ||+||||+|+|+  |||++|++|++++..
T Consensus         1 iGvnyG~~~~nl--p~p~~vv~l----~ks~~i--~~vri~d~~~~iL~--a~a~S~i~v~v~--vpN~~l~~la~~~~~   68 (310)
T PF00332_consen    1 IGVNYGRVGNNL--PSPCKVVSL----LKSNGI--TKVRIYDADPSILR--AFAGSGIEVMVG--VPNEDLASLASSQSA   68 (310)
T ss_dssp             EEEEE---SSS-----HHHHHHH----HHHTT----EEEESS--HHHHH--HHTTS--EEEEE--E-GGGHHHHHHHHHH
T ss_pred             CeEeccCccCCC--CCHHHHHHH----HHhccc--ccEEeecCcHHHHH--HHhcCCceeeec--cChHHHHHhccCHHH
Confidence            899999999998  999999999    999998  99999999999999  999999999995  699999999999999


Q ss_pred             HHHHHHhhccCCCCCccEEEEEccCccccccCCCchhhHHHHHHHHHHHHHhCCCCCceEEcccCCcCcccccCCCc---
Q 006966          106 AISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSH---  182 (623)
Q Consensus       106 A~~WV~~NV~py~p~t~I~~I~VGnenE~~~~~~~~~~LvPAM~Nih~AL~~~gL~~~IKVSTp~s~~vL~~s~~~~---  182 (623)
                      |..||++||++|+|+|||++|+||  ||++...... .|||||+|||+||.++||+++|||||+|+|++|.+++|++   
T Consensus        69 A~~Wv~~nv~~~~~~~~i~~i~VG--nEv~~~~~~~-~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~  145 (310)
T PF00332_consen   69 AGSWVRTNVLPYLPAVNIRYIAVG--NEVLTGTDNA-YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGV  145 (310)
T ss_dssp             HHHHHHHHTCTCTTTSEEEEEEEE--ES-TCCSGGG-GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-E
T ss_pred             HhhhhhhcccccCcccceeeeecc--cccccCccce-eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCc
Confidence            999999999999999999999999  8888642222 8999999999999999999999999999999999998874   


Q ss_pred             -c----hhHHHHHHHHhhcCCeeEEeeC-------CCCCcccccccccccccccccCCCCC-CCchHHHHH---HHhcCC
Q 006966          183 -E----GEIGLIFGYIKKTGSVVIIEAG-------IDGKLSMAEVLVQPLLKKAIKATSIL-PDSDILIDL---VMKSPL  246 (623)
Q Consensus       183 -~----~~i~plL~FL~~T~SPfmVNvY-------~~~~i~LdyALF~~~~d~v~~a~~~L-~~~Da~LDa---Al~~~G  246 (623)
                       +    ..|+|||+||++|+||||||+|       ++.+++|+|||||++. .+.|..-.+ ++||+++|+   ||++.|
T Consensus       146 F~~~~~~~~~~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~-~~~D~~~~y~nlfDa~~da~~~a~~~~g  224 (310)
T PF00332_consen  146 FRSDIASVMDPLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNS-GVVDGGLAYTNLFDAMVDAVYAAMEKLG  224 (310)
T ss_dssp             ESHHHHHHHHHHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS--SEETTEEESSHHHHHHHHHHHHHHTTT
T ss_pred             ccccchhhhhHHHHHhhccCCCceeccchhhhccCCcccCCcccccccccc-cccccchhhhHHHHHHHHHHHHHHHHhC
Confidence             2    3589999999999999999999       6789999999999873 444542111 579999997   699999


Q ss_pred             CCCcccccchhhhhccccCccchhhHHHHhHHhhhhhcccCCchhhhhhhcCcccccCCCCccccCCC---CCCCCCCCc
Q 006966          247 VPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPV---PPDNKPTPT  323 (623)
Q Consensus       247 ~p~~~vV~eeTGwps~~~~daa~~da~~Aav~~nA~~yn~~li~~~~~l~~~~gTp~v~etgwPt~~~---~ed~kpgpt  323 (623)
                      +++++++..|||||+++.        ..++. +||++|+++++++.     ..||+.+++.+++.+.|   +|+.|++..
T Consensus       225 ~~~~~vvv~ETGWPs~G~--------~~a~~-~nA~~~~~nl~~~~-----~~gt~~~~~~~~~~y~F~~FdE~~K~~~~  290 (310)
T PF00332_consen  225 FPNVPVVVGETGWPSAGD--------PGATP-ENAQAYNQNLIKHV-----LKGTPLRPGNGIDVYIFEAFDENWKPGPE  290 (310)
T ss_dssp             -TT--EEEEEE---SSSS--------TTCSH-HHHHHHHHHHHHHC-----CGBBSSSBSS---EEES-SB--TTSSSSG
T ss_pred             CCCceeEEeccccccCCC--------CCCCc-chhHHHHHHHHHHH-----hCCCcccCCCCCeEEEEEEecCcCCCCCc
Confidence            999999777899999965        24566 88999999988874     27898998888777776   899998876


Q ss_pred             ccccCCCCCceecCCCCCCCCCC
Q 006966          324 IVTVPATNPVTVSPANPSGTPLP  346 (623)
Q Consensus       324 ~~~ay~~n~~~~gLf~pdGTPvY  346 (623)
                      .       |||||||++|++|+|
T Consensus       291 ~-------E~~wGlf~~d~~~ky  306 (310)
T PF00332_consen  291 V-------ERHWGLFYPDGTPKY  306 (310)
T ss_dssp             G-------GGG--SB-TTSSBSS
T ss_pred             c-------cceeeeECCCCCeec
Confidence            5       889999999999999

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.

>smart00768 X8 Possibly involved in carbohydrate binding	Back alignment and domain information

>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges	Back alignment and domain information

>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane	Back alignment and domain information

>KOG0260 consensus RNA polymerase II, large subunit [Transcription]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		623
2jon_A		101	Solution Structure Of The C-Terminal Domain Ole E 9		9e-15

>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101

Back alignment and structure

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 420 SWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQNHASFAFNSYYQK-N 478
           SWCV K GVS+  +   ++YAC  G  DC  IQ G +C+ PNT++ HA++  N YYQ   
Sbjct: 12  SWCVPKPGVSDDQLTGNINYACSQG-IDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAG 70
Query: 479 PSPTSCDFGGTAMIVNTNPSTGSCVF 504
            +  +CDF  TA + NTNPS G+C F
Sbjct: 71  RNSWNCDFSQTATLTNTNPSYGACNF 96

PyMOL of 2jon

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		623
2jon_A		101	Beta-1,3-glucanase; olive pollen, allergen; NMR {O	1e-41
2w61_A		555	GAS2P, glycolipid-anchored surface protein 2; glyc	1e-23
1twf_A		1733	B220, DNA-directed RNA polymerase II largest subun	1e-10
1twf_A		1733	B220, DNA-directed RNA polymerase II largest subun	3e-08
1twf_A		1733	B220, DNA-directed RNA polymerase II largest subun	5e-08
1twf_A		1733	B220, DNA-directed RNA polymerase II largest subun	4e-04
3h0g_A		1752	DNA-directed RNA polymerase II subunit RPB1; trans	2e-08
3h0g_A		1752	DNA-directed RNA polymerase II subunit RPB1; trans	3e-08
2cyg_A		312	Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be	5e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
3em5_A		316	Beta-1,3-glucanase; glycoprotein, rossmann fold, (	9e-07
3dzy_A		467	Retinoic acid receptor RXR-alpha; DNA-binding, HOS	7e-06
3dzy_A		467	Retinoic acid receptor RXR-alpha; DNA-binding, HOS	5e-04
3v1v_A		433	2-MIB synthase, 2-methylisoborneol synthase; class	8e-06
3v1v_A		433	2-MIB synthase, 2-methylisoborneol synthase; class	5e-05
3v1v_A		433	2-MIB synthase, 2-methylisoborneol synthase; class	2e-04
3v1v_A		433	2-MIB synthase, 2-methylisoborneol synthase; class	2e-04
3v1v_A		433	2-MIB synthase, 2-methylisoborneol synthase; class	6e-04
3nwa_A		703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	1e-05
3nwa_A		703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	6e-05
3nwa_A		703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	1e-04
3nwa_A		703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	3e-04
3nwa_A		703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	6e-04
3nwa_A		703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	8e-04
1ghs_A		306	1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg	3e-05
1m2v_B		926	SEC24, protein transport protein SEC24, SEC24P, SE	5e-05
3u3p_A		313	Tumor necrosis factor receptor superfamily member;	7e-05
3ur8_A		323	Glucan endo-1,3-beta-D-glucosidase; glucoside hydr	1e-04
1aq0_A		306	1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl	6e-04

>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101	Back alignment and structure

 Score =  145 bits (366), Expect = 1e-41
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 6/105 (5%)

Query: 406 TPPTTTNAPAIPGQSWCVAKNGVSETAIQQALDYACGIGGADCSLIQQGASCYNPNTLQN 465
           TP  T  A      SWCV K GVS+  +   ++YAC   G DC  IQ G +C+ PNT++ 
Sbjct: 2   TPTPTPKAAG----SWCVPKPGVSDDQLTGNINYACS-QGIDCGPIQPGGACFEPNTVKA 56

Query: 466 HASFAFNSYYQKNP-SPTSCDFGGTAMIVNTNPSTGSCVFPSSSS 509
           HA++  N YYQ    +  +CDF  TA + NTNPS G+C FPS S+
Sbjct: 57  HAAYVMNLYYQHAGRNSWNCDFSQTATLTNTNPSYGACNFPSGSN 101

PyMOL of 2jon

>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555	Back alignment and structure

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733	Back alignment and structure

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733	Back alignment and structure

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733	Back alignment and structure

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733	Back alignment and structure

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752	Back alignment and structure

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752	Back alignment and structure

>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316	Back alignment and structure

>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467	Back alignment and structure

>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467	Back alignment and structure

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433	Back alignment and structure

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433	Back alignment and structure

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433	Back alignment and structure

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433	Back alignment and structure

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433	Back alignment and structure

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703	Back alignment and structure

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703	Back alignment and structure

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703	Back alignment and structure

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703	Back alignment and structure

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703	Back alignment and structure

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703	Back alignment and structure

>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306	Back alignment and structure

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926	Back alignment and structure

>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A Length = 313	Back alignment and structure

>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323	Back alignment and structure

>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		623
3em5_A		316	Beta-1,3-glucanase; glycoprotein, rossmann fold, (	100.0
3ur8_A		323	Glucan endo-1,3-beta-D-glucosidase; glucoside hydr	100.0
2cyg_A		312	Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be	100.0
1aq0_A		306	1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl	100.0
1ghs_A		306	1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg	100.0
2w61_A		555	GAS2P, glycolipid-anchored surface protein 2; glyc	100.0
2jon_A		101	Beta-1,3-glucanase; olive pollen, allergen; NMR {O	99.97
3em5_A		316	Beta-1,3-glucanase; glycoprotein, rossmann fold, (	99.34
3ur8_A		323	Glucan endo-1,3-beta-D-glucosidase; glucoside hydr	99.3
1ghs_A		306	1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg	99.29
2cyg_A		312	Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be	99.27
1aq0_A		306	1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl	99.25
3nco_A		320	Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1	88.63
1ur4_A		399	Galactanase; hydrolase, beta-1, glycoside hydrolas	85.67
3pzt_A		327	Endoglucanase; alpha/beta barrel, glycosyl hydrola	81.33

>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*	Back alignment and structure

Probab=100.00  E-value=1.5e-68  Score=558.78  Aligned_cols=283  Identities=19%  Similarity=0.188  Sum_probs=253.2

Q ss_pred             eeeEeccCCCCCCCCCChhhhhccCccccccCCCCCCcEEEecCCccccchhhhcCCCceEEEecccCchhHHHhhcChH
Q 006966           25 LVGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSEL  104 (623)
Q Consensus        25 ~iGVnYG~~gdnL~lPsP~~vv~l~~~~lk~~~i~~~~VRiyDadp~vL~~~AlanTgI~v~V~v~vpN~~i~~la~s~~  104 (623)
                      .||||||++||||  |+|++||+|    ||+++|  ++|||||+|+++|+  ||+||||+|+|+  |+|++|++|+ +++
T Consensus         1 ~iGvnyG~~~~nl--p~p~~vv~l----lks~gi--~~VRlYdaD~~vL~--Al~~sgi~v~vG--V~n~~l~~la-~~~   67 (316)
T 3em5_A            1 EVGVCYGMQGNNL--PPVSEVIAL----YKKSNI--TRMRIYDPNQAVLE--ALRGSNIELILG--VPNSDLQSLT-NPS   67 (316)
T ss_dssp             CCEEECCCCCTTC--CCHHHHHHH----HHHTTC--CEEECSSCCHHHHH--HHTTCCCEEEEE--ECGGGHHHHT-SHH
T ss_pred             CeeEEcCcCCCCC--CCHHHHHHH----HHHcCC--CEEEEecCCHHHHH--HhhcCCceEEEe--cccchhhhcc-CHH
Confidence            3899999999998  999999999    999998  99999999999999  999999999996  6999999999 999


Q ss_pred             HHHHHHHhhccCCCCCccEEEEEccCccccccCCCc----hhhHHHHHHHHHHHHHhCCCCCceEEcccCCcCcccccCC
Q 006966          105 SAISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNV----LPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNT  180 (623)
Q Consensus       105 ~A~~WV~~NV~py~p~t~I~~I~VGnenE~~~~~~~----~~~LvPAM~Nih~AL~~~gL~~~IKVSTp~s~~vL~~s~~  180 (623)
                      +|++||++||.+|+|.++|++|+||  ||++...+.    +..|||||||||+||+++||+++|||||+|++++|.+++|
T Consensus        68 ~A~~WV~~nV~~y~p~~~I~~IaVG--NEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~p  145 (316)
T 3em5_A           68 NAKSWVQKNVRGFWSSVRFRYIAVG--NEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYP  145 (316)
T ss_dssp             HHHHHHHHHTGGGTTTSCEEEEEEE--ESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSS
T ss_pred             HHHHHHHHhhhhcCCCceEEEEEEe--cccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCC
Confidence            9999999999999999999999999  888864443    7899999999999999999998999999999999999997


Q ss_pred             Cc----c----hhHHHHHHHHhhcCCeeEEeeC-------CCCCcccccccccccccccccCCCCC---CCchHHHHH--
Q 006966          181 SH----E----GEIGLIFGYIKKTGSVVIIEAG-------IDGKLSMAEVLVQPLLKKAIKATSIL---PDSDILIDL--  240 (623)
Q Consensus       181 ~~----~----~~i~plL~FL~~T~SPfmVNvY-------~~~~i~LdyALF~~~~d~v~~a~~~L---~~~Da~LDa--  240 (623)
                      |+    +    .+|+|||+||++|+||||||+|       ++.+|+|+||||++.  .+++..+++   ++||++||+  
T Consensus       146 PS~g~F~~~~~~~~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~--~~~~~~~~~~Y~nlfDa~~Da~~  223 (316)
T 3em5_A          146 PSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSP--SVVVWDGQRGYKNLFDATLDALY  223 (316)
T ss_dssp             GGGCEECGGGHHHHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCS--SCSEEETTEEECSHHHHHHHHHH
T ss_pred             CCCceechhHHHHHHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCC--CcccCCCCccHHHHHHHHHHHHH
Confidence            64    3    3589999999999999999999       668999999999983  555655554   579999997  


Q ss_pred             -HHhcCCCCCcccccchhhhhccccCccchhhHHHHhHHhhhhhcccCCchhhhhhhcCcccccCCCCccccCCC---CC
Q 006966          241 -VMKSPLVPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPV---PP  316 (623)
Q Consensus       241 -Al~~~G~p~~~vV~eeTGwps~~~~daa~~da~~Aav~~nA~~yn~~li~~~~~l~~~~gTp~v~etgwPt~~~---~e  316 (623)
                       ||++.|+++++++..|||||+++.        ..+++ +||++|++++++|.     +.|||+|++..++++.|   +|
T Consensus       224 ~Al~~~g~~~~~v~V~EtGWPs~G~--------~~as~-~na~~y~~~li~~~-----~~GTP~rp~~~~~~y~F~lfDe  289 (316)
T 3em5_A          224 SALERASGGSLEVVVSESGWPSAGA--------FAATF-DNGRTYLSNLIQHV-----KRGTPKRPKRAIETYLFAMFDE  289 (316)
T ss_dssp             HHHHHTTCTTCCEEEEEECCCSSSS--------TTCCH-HHHHHHHHHHHHHT-----TSCCSSSCSSCCCEEESCSBCC
T ss_pred             HHHHHcCCCCCceEeccccCCCCCC--------CCCCH-HHHHHHHHHHHHhc-----cCCCCCCCCCCceEEEEEeecC
Confidence             699999999999877899999963        25788 99999999988873     56999999877777665   78


Q ss_pred             CCCCCCcccccCCCCCceecCCCCCCCCCC
Q 006966          317 DNKPTPTIVTVPATNPVTVSPANPSGTPLP  346 (623)
Q Consensus       317 d~kpgpt~~~ay~~n~~~~gLf~pdGTPvY  346 (623)
                      +.|+ ++.       |+|||||++|++|+|
T Consensus       290 ~~K~-~~~-------E~~~Glf~~d~~~ky  311 (316)
T 3em5_A          290 NKKQ-PEV-------EKHFGLFFPNKWQKY  311 (316)
T ss_dssp             TTCS-SGG-------GGCCCSBCTTSCBSS
T ss_pred             CCCC-CCC-------CceeeEECCCCCEee
Confidence            8887 444       889999999999999

PyMOL of 3em5

>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A	Back alignment and structure

>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3	Back alignment and structure

>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A	Back alignment and structure

>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3	Back alignment and structure

>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*	Back alignment and structure

>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}	Back alignment and structure

>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*	Back alignment and structure

>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A	Back alignment and structure

>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3	Back alignment and structure

>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3	Back alignment and structure

>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A	Back alignment and structure

>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*	Back alignment and structure

>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*	Back alignment and structure

>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		623
d2cyga1		312	c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (	1e-07
d1ghsa_		306	c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu	0.002
d1aq0a_		306	c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu	0.003

>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 6/112 (5%)

Query: 61  QRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELSAISWLETNVLTTHPH 120
            R+R+Y  N   L   +L NSN    V L +  S V  L  +  +A  W+  NV+   P 
Sbjct: 28  ARMRLYDPNQAALQ--ALRNSN--IQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPS 83

Query: 121 VNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPL 172
           V+ + I +   +E   G ++   IL A+++ ++AL+   L  ++KVS A   
Sbjct: 84  VSFRYIAV--GNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDT 133

PyMOL of d2cyga1

>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306	Back information, alignment and structure

>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		623
d2cyga1		312	Plant beta-glucanases {Banana (Musa acuminata), 1,	100.0
d1ghsa_		306	Plant beta-glucanases {Barley (Hordeum vulgare), 1	100.0
d1aq0a_		306	Plant beta-glucanases {Barley (Hordeum vulgare), 1	100.0
d1ghsa_		306	Plant beta-glucanases {Barley (Hordeum vulgare), 1	98.97
d2cyga1		312	Plant beta-glucanases {Banana (Musa acuminata), 1,	98.9
d1aq0a_		306	Plant beta-glucanases {Barley (Hordeum vulgare), 1	98.87
d1wkya2		297	Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449	95.2
d1bqca_		302	Beta-mannanase {Thermomonospora fusca [TaxId: 2021	90.81

>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

Probab=100.00  E-value=1e-56  Score=467.30  Aligned_cols=286  Identities=21%  Similarity=0.227  Sum_probs=253.3

Q ss_pred             eeEeccCCCCCCCCCChhhhhccCccccccCCCCCCcEEEecCCccccchhhhcCCCceEEEecccCchhHHHhhcChHH
Q 006966           26 VGFAFNGRENTSAASSTSEVTSFDSLGLKLDNVPSQRIRVYVANHRVLNFSSLLNSNASSSVDLYLNLSLVVDLMQSELS  105 (623)
Q Consensus        26 iGVnYG~~gdnL~lPsP~~vv~l~~~~lk~~~i~~~~VRiyDadp~vL~~~AlanTgI~v~V~v~vpN~~i~~la~s~~~  105 (623)
                      |||||||.||||  |||++|++|    ||+++|  ++|||||+|++||+  |+++|||+|+|+  |+|++|.++++++..
T Consensus         1 ~gi~yg~~~~nl--ps~~~vv~l----Lk~~~i--~~IRlY~~d~~vL~--A~~~tgi~v~lG--v~n~~l~~~~~~~~~   68 (312)
T d2cyga1           1 IGVCYGMLGNNL--PPPSEVVSL----YKSNNI--ARMRLYDPNQAALQ--ALRNSNIQVLLD--VPRSDVQSLASNPSA   68 (312)
T ss_dssp             CEEECCCCCSSC--CCHHHHHHH----HHHTTC--CEEEESSCCHHHHH--HHTTSCCEEEEE--ECHHHHHHHHHCTTH
T ss_pred             CeeeCCCccCCC--CCHHHHHHH----HHhCCC--CEEEEeCCCHHHHH--HHHhcCCEEEEe--eccchhhhccCCHHH
Confidence            799999999998  999999999    999988  99999999999999  999999999995  699999999999999


Q ss_pred             HHHHHHhhccCCCCCccEEEEEccCccccccCCCchhhHHHHHHHHHHHHHhCCCCCceEEcccCCcCcccccCCCc---
Q 006966          106 AISWLETNVLTTHPHVNIKSIILSCSSEEFEGKNVLPLILSALKSFHSALNRIHLDMKVKVSVAFPLPLLENLNTSH---  182 (623)
Q Consensus       106 A~~WV~~NV~py~p~t~I~~I~VGnenE~~~~~~~~~~LvPAM~Nih~AL~~~gL~~~IKVSTp~s~~vL~~s~~~~---  182 (623)
                      |++||++||++|++.++|++|+||  ||++...+....+||||+|+|+||+++|+...||++++++++++..++|++   
T Consensus        69 a~~wv~~~v~~~~~~~~I~~IaVG--NE~l~~~~~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~  146 (312)
T d2cyga1          69 AGDWIRRNVVAYWPSVSFRYIAVG--NELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGA  146 (312)
T ss_dssp             HHHHHHHHTGGGTTTSEEEEEEEE--ESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCC
T ss_pred             HHHHHHHHHhccCCCceEEEEEec--CEEeeCCcCchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCcccc
Confidence            999999999999999999999999  888876677889999999999999999999999999999999999998865   


Q ss_pred             -----chhHHHHHHHHhhcCCeeEEeeC-------CCCCcccccccccccccccccCCCCC-CCchHHHHH---HHhcCC
Q 006966          183 -----EGEIGLIFGYIKKTGSVVIIEAG-------IDGKLSMAEVLVQPLLKKAIKATSIL-PDSDILIDL---VMKSPL  246 (623)
Q Consensus       183 -----~~~i~plL~FL~~T~SPfmVNvY-------~~~~i~LdyALF~~~~d~v~~a~~~L-~~~Da~LDa---Al~~~G  246 (623)
                           .+.|+|+++||..+++|||+|+|       ++.+++|+|++|+++.....+.+..+ +++|+++|.   ||++.|
T Consensus       147 ~~~~~~~~l~~~~~fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g  226 (312)
T d2cyga1         147 FSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVG  226 (312)
T ss_dssp             BCHHHHHHHHHHHHHHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTT
T ss_pred             ccchhHHHHHHHHHHHHhcCCeeeEeccchhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHHHHHHHHhC
Confidence                 25689999999999999999999       67889999999998743333332222 468898886   699999


Q ss_pred             CCCcccccchhhhhccccCccchhhHHHHhHHhhhhhcccCCchhhhhhhcCcccccCCCCccccCCC---CCCCCCCCc
Q 006966          247 VPDAKQVAEFTEIVSKFFENNSQIDELYADVASSMGEFVQKGLKVVRRLQNSLKTSIHDTTIFPTTPV---PPDNKPTPT  323 (623)
Q Consensus       247 ~p~~~vV~eeTGwps~~~~daa~~da~~Aav~~nA~~yn~~li~~~~~l~~~~gTp~v~etgwPt~~~---~ed~kpgpt  323 (623)
                      +++++++..|||||+++..       ..|+. +||++|+++++++.     +.|||++++.+++.+.|   +|+.|++. 
T Consensus       227 ~~~~~ivI~EtGWPs~G~~-------~~as~-~na~~y~~~l~~~~-----~~gtp~~~~~~i~~f~FeaFDE~wK~G~-  292 (312)
T d2cyga1         227 GANVAVVVSESGWPSAGGG-------AEAST-SNAQTYNQNLIRHV-----GGGTPRRPGKEIEAYIFEMFNENQKAGG-  292 (312)
T ss_dssp             CTTCCEEEEEECCCSSSSS-------TTSSH-HHHHHHHHHHHHHG-----GGCCSSSCSSCCCEEESCSBCCTTSCSS-
T ss_pred             CCCCceEEecCCcccCCCC-------CCCCH-HHHHHHHHHHHHHH-----hcCCCCCCCCCccEEEEeEeCCCCCCCC-
Confidence            9999997778999999742       24777 89999998888763     46999999988887766   88889874 


Q ss_pred             ccccCCCCCceecCCCCCCCCCC
Q 006966          324 IVTVPATNPVTVSPANPSGTPLP  346 (623)
Q Consensus       324 ~~~ay~~n~~~~gLf~pdGTPvY  346 (623)
                      .       |+|||||++|+||+|
T Consensus       293 ~-------E~~wGlf~~d~~~ky  308 (312)
T d2cyga1         293 I-------EQNFGLFYPNKQPVY  308 (312)
T ss_dssp             G-------GGCCCSBCTTSCBSS
T ss_pred             c-------cCccccCCCCCCEec
Confidence            3       889999999999999

PyMOL of d2cyga1

>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}	Back information, alignment and structure

>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]}	Back information, alignment and structure

>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}	Back information, alignment and structure

>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]}	Back information, alignment and structure

>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]}	Back information, alignment and structure

>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]}	Back information, alignment and structure

>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]}	Back information, alignment and structure