Citrus Sinensis ID: 007015

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-

MSSSPAAQLQSSGSDSEGSGQACEQSIVIPNRFITIADSFEKKEHSWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKSHPSLSEHDRRRLCKLMNCEKLSLDACTHAAQNDRLPLRTVVQVLFSEQVKMRTAMQETEPALQCDNSEQGDTQPSTSIEIKNLREELENVKTRMAELQKDYSELQREYEKLSNKHKIVSSWSLGWRKIKNSFHSKADADETGNRRQTFNSTSRRTSFRRRPSLP

cccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccEEEEEccEEEEEccHHcccccHHHHHHHcccccccccccEEEccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHccHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccc

************************QSIVIPNRFITIADSFEKKEHSWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMD*****************************VGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNY*************NTMHNIDVVQRIMDYFLM*****************SKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKSHPSLS*HDRRRLCKLMNCEKLSLDACTHAAQNDRLPLRTVVQVLFSEQ********************************************************************************************************************

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MSSSPAAQLQSSGSDSEGSGQACEQSIVIPNRFITIADSFEKKEHSWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGMMLEDANANDLLIPNYKNEDHAKLNSPEHNTMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKSHPSLSEHDRRRLCKLMNCEKLSLDACTHAAQNDRLPLRTVVQVLFSEQVKMRTAMQETEPALQCDNSEQGDTQPSTSIExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHKIVSSWSLGWRKIKNSFHSKADADETGNRRQTFNSTSRRTSFRRRPSLP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Putative BTB/POZ domain-containing protein DOT3	May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	probable	Q9LFU0

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1R29, chain A
Confidence level:confident
Coverage over the Query: 47-158
View the alignment between query and template
View the model in PyMOL

Template: 3I3N, chain A
Confidence level:confident
Coverage over the Query: 46-258,291-344
View the alignment between query and template
View the model in PyMOL

Template: 3VMX, chain A
Confidence level:probable
Coverage over the Query: 535-570
View the alignment between query and template
View the model in PyMOL