Citrus Sinensis ID: 007038

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIYKSQMQN
ccccccccccccEEEEEEEEcccccEEEEEEEEEEEEEEEEcccEEEEccEEEEEEccccccccccccccccHHHHHHHHHHHHHccccEEccccccccccHHHHHHHHccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHHccccccccccccccccccccEEccccccHHHHHHHHHcccccccEEEEEcccccccccccHHHHHHHHHHcccccccEEEEEccccccEEcccccEEEEEcccccccccccccccccEEcccccccHHHHHHHHHHccEEEEEEccccEEEEEEEcccccccccEEcccccccccccccHHHHHHHcccccEEEEEEEEEEEEEcccEEEEEEEEccccEEEEEEEEEEccccEEEEEEEEEEEEcccEEEEEEEEEEcccccccccEEEEEEEEccccccEEEEccccccccccccccccEEEEcccccccccccccccccccccccEEEEEEcccccEEEEEEccccccEEEEEccccHHHHHHccccccccccccEEEEEcccccccccccccccccccccccccccEEEEEEEEEcccccccHHHHHHcccc
cccEEccccEccEEEEEEEEEccccEEEEEEEEEcEccEEEEccEEEEccEEccEEEEEccccEcccEccccHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHccEEEEEcccEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHcccccEEcccccccccccccEccEccccccHHHHHccccccccEEEEEEccccccccccHHHHHHHHHHcccEEEEEEcccEcccEEEEcccccEEEEcccccccccccHHHHccccEcccccEccHHHHHHHHcccEEEEEEccEEEEccccHHcccccccEEEcccccccccccHHHHHHHHHccccHHcHHHHEEEEEcccccEEEEEEEEEccccccEcccEccccccEEEEEEEEEEEccccEEEEEEEEEccccccccccEEEEEEEcccccccEEEEccccccccccHHHHHHcccccccHHHHccccEccccccccccEEEEEEEcccccEEEEEEEccccccEEEEccccHHHHHHccccccccccccEEEEEEccHccccccccccccccccHEcccccEEEEEEEEEccccccHHHHHHHHccc
mprlwsaeqpnLYTLVVILKhasgpvvdcesclvgirqvskapkqllvngnpvvirgvnrhehhprvgktniescMVKDLVLMKQNninavrnshypqhprwyELCDLFglymideaniethgfyfsehlkhptmepsWAAAMMDRVIGMVERDKNHASIICWslgneaghgpnhsaaagwirgkdpsrllhyegggsrtpstdivcpmyMRVWDIVMIakdptetrpliLCEYShamgnsngnIHEYWEAIDstfglqggfiwdWVDQGLLRELADgtkhwayggdfgdtpndlnfclngllwpdrtphpalheVKYVYQAIKVSLKKGTLKVEGVSVMkrgifpcfwraptdndkgggessyYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVydgtprvdmsSLTKLEKAKALFEIVIDYTIygsgnvivecnfkpntsdlpplprvgveFHLEQSMDKIkfygrgpfecypdrkaaahVDVYEQIVgdmhvpyivpgecaaradvrwvtfqnkegigiyasmysssppmqlnasyyttteldrathneqlvkedkievhldhkhmglggddswtpcvhdkylvpaVAYSFsirlspltaatsgygiyksqmqn
mprlwsaeqpNLYTLVVILKHASGPVVDCESCLVGIRQvskapkqllvngnpvvirgvnrhehhprvgktniesCMVKDLVLMKQNNINAvrnshypqhpRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEgggsrtpstdivCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRgifpcfwraptdndkgggESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYasmysssppMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIYKSQMQN
MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIYKSQMQN
********QPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGG***TPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDN***GGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYS******LNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIY******
MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLT***************
MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIYKSQMQN
*PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIYKSQMQ*
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MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYGIYKSQMQN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query620 2.2.26 [Sep-21-2011]
Q6LL68 1030 Beta-galactosidase OS=Pho yes no 0.561 0.337 0.534 1e-108
Q7MG04 1031 Beta-galactosidase OS=Vib yes no 0.561 0.337 0.536 1e-107
Q8D4H3 1032 Beta-galactosidase OS=Vib yes no 0.561 0.337 0.531 1e-107
B4S2K9 1041 Beta-galactosidase OS=Alt yes no 0.530 0.316 0.565 1e-106
B1LIM91024 Beta-galactosidase OS=Esc yes no 0.532 0.322 0.555 1e-106
P81650 1039 Beta-galactosidase OS=Pse yes no 0.524 0.312 0.554 1e-106
A3FEW8 1028 Beta-galactosidase OS=Ent N/A no 0.520 0.314 0.548 1e-105
A4W7D2 1028 Beta-galactosidase OS=Ent yes no 0.520 0.314 0.548 1e-105
A5F5U6 1024 Beta-galactosidase OS=Vib yes no 0.532 0.322 0.537 1e-104
Q2XQU3 1029 Beta-galactosidase 2 OS=E no no 0.520 0.313 0.545 1e-104
>sp|Q6LL68|BGAL_PHOPR Beta-galactosidase OS=Photobacterium profundum GN=lacZ PE=3 SV=1 Back     alignment and function desciption
 Score =  392 bits (1006), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 19/367 (5%)

Query: 2   PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRH 61
           P+ W+AE PNLY +VV L  A G  ++ E+  VG R+V     QL +NG P++IRGVNRH
Sbjct: 293 PQQWTAETPNLYRVVVSLLDAEGNHLESEAYQVGFRKVEVKDGQLQLNGKPLLIRGVNRH 352

Query: 62  EHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIET 121
           EHHP +G    E  MV+D+ LMKQ N NAVR +HYP HPRWYELCD +GLY+ DEANIET
Sbjct: 353 EHHPELGHVMTEEDMVRDICLMKQYNFNAVRTAHYPNHPRWYELCDQYGLYVCDEANIET 412

Query: 122 HGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGW 181
           HG      L   + +P WA A M R   MV RDKNH SII WSLGNE+GHG +H+A   W
Sbjct: 413 HGMIPMNRL---SADPQWAHAYMSRYTQMVMRDKNHPSIIIWSLGNESGHGSSHNAMYAW 469

Query: 182 IRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRV-----------WDIVMIAKDPTETRPLI 230
            +  DPSR + YEGGG+ T +TDI+CPMY RV           W I      P E RPLI
Sbjct: 470 SKQFDPSRPVQYEGGGANTTATDIICPMYARVNTTVEDEAVPKWPIKQWISLPNEQRPLI 529

Query: 231 LCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGD 290
           LCEY+HAMGNS GN +EYW+A      LQGGFIWDWVDQGL +   DG   WAYGGDFGD
Sbjct: 530 LCEYAHAMGNSLGNFNEYWDAFREFPRLQGGFIWDWVDQGLSQWDNDGKHFWAYGGDFGD 589

Query: 291 TPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCFWR 350
           T ND  FC+NGL++PDRTPHP L EVK+  + I V+L +   +   ++V    +F     
Sbjct: 590 TINDRQFCINGLIFPDRTPHPTLEEVKFCQRMITVALTQQDKQQCHLTVTNEYVF----- 644

Query: 351 APTDNDK 357
             TDN++
Sbjct: 645 RSTDNEQ 651

Photobacterium profundum (taxid: 74109)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3
>sp|Q7MG04|BGAL_VIBVY Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) GN=lacZ PE=3 SV=1 Back     alignment and function description
>sp|Q8D4H3|BGAL_VIBVU Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) GN=lacZ PE=3 SV=2 Back     alignment and function description
>sp|B4S2K9|BGAL_ALTMD Beta-galactosidase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=lacZ PE=3 SV=1 Back     alignment and function description
>sp|B1LIM9|BGAL_ECOSM Beta-galactosidase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lacZ PE=3 SV=1 Back     alignment and function description
>sp|P81650|BGAL_PSEHA Beta-galactosidase OS=Pseudoalteromonas haloplanktis GN=lacZ PE=1 SV=2 Back     alignment and function description
>sp|A3FEW8|BGAL_ENTAG Beta-galactosidase OS=Enterobacter agglomerans GN=lacZ PE=1 SV=2 Back     alignment and function description
>sp|A4W7D2|BGAL_ENT38 Beta-galactosidase OS=Enterobacter sp. (strain 638) GN=lacZ PE=3 SV=1 Back     alignment and function description
>sp|A5F5U6|BGAL_VIBC3 Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=lacZ PE=3 SV=2 Back     alignment and function description
>sp|Q2XQU3|BGAL2_ENTCL Beta-galactosidase 2 OS=Enterobacter cloacae GN=lacZ PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query620
224057302 1110 predicted protein [Populus trichocarpa] 0.679 0.379 0.703 1e-178
255543993 1110 beta-galactosidase, putative [Ricinus co 0.527 0.294 0.873 1e-176
224072889 1113 predicted protein [Populus trichocarpa] 0.535 0.298 0.858 1e-175
359495000 1127 PREDICTED: beta-galactosidase [Vitis vin 0.530 0.291 0.852 1e-174
225465868 1114 PREDICTED: beta-galactosidase isoform 1 0.530 0.295 0.852 1e-174
449449270 1114 PREDICTED: beta-galactosidase-like [Cucu 0.522 0.290 0.810 1e-168
356548875 1120 PREDICTED: beta-galactosidase-like [Glyc 0.546 0.302 0.797 1e-166
357515121 1118 Beta Galactosidase-like protein [Medicag 0.685 0.380 0.650 1e-166
79314957 1108 beta-galactosidase [Arabidopsis thaliana 0.519 0.290 0.819 1e-165
22331783 1107 beta-galactosidase [Arabidopsis thaliana 0.520 0.291 0.819 1e-165
>gi|224057302|ref|XP_002299206.1| predicted protein [Populus trichocarpa] gi|222846464|gb|EEE84011.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 313/445 (70%), Positives = 344/445 (77%), Gaps = 24/445 (5%)

Query: 1   MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNR 60
           MP+LWSAEQPNLY LV+ LK A+G VVDCESCLVGIRQVSKAPKQLLVNG+PV++RGVNR
Sbjct: 354 MPKLWSAEQPNLYILVLSLKDATGQVVDCESCLVGIRQVSKAPKQLLVNGHPVILRGVNR 413

Query: 61  HEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIE 120
           HEHHPRVGKTNIESCM+KDLVLMKQNN+NAVRNSHYPQH RWYELCDLFG+YMIDEANIE
Sbjct: 414 HEHHPRVGKTNIESCMIKDLVLMKQNNMNAVRNSHYPQHHRWYELCDLFGMYMIDEANIE 473

Query: 121 THGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAG 180
           THGFY  EHLKHPT E SWAAAMMDRVI MVERDKNHA II WSLGNEA +GPNHSAAAG
Sbjct: 474 THGFYLCEHLKHPTQEQSWAAAMMDRVISMVERDKNHACIISWSLGNEASYGPNHSAAAG 533

Query: 181 WIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGN 240
           WIR KD SRL+HYEGGGSRT STDIVCPMYMRVWDIV IAKDP E+RPLILCEYSHAMGN
Sbjct: 534 WIREKDTSRLVHYEGGGSRTTSTDIVCPMYMRVWDIVKIAKDPAESRPLILCEYSHAMGN 593

Query: 241 SNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLN 300
           SNGNIHEYWEAI+STFGLQGGFIWDWVDQGLL++  DGTKHWAYGGDFGDTPNDLNFCLN
Sbjct: 594 SNGNIHEYWEAINSTFGLQGGFIWDWVDQGLLKDSGDGTKHWAYGGDFGDTPNDLNFCLN 653

Query: 301 GLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVEGVSVMKRGIFPCF-WRAPTDNDKGG 359
           GL WPDRTPHPALHEVKYVYQ IKVSL++  +K+      +      F W    D  + G
Sbjct: 654 GLTWPDRTPHPALHEVKYVYQPIKVSLEESRIKITSTHFFQTTQGLEFSWATQGDGYEIG 713

Query: 360 G----------ESSYYSRWR--------AAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDG 401
                      +SSY   W         A+     +FLT + ++ + T +     VV   
Sbjct: 714 SGILSLPPIEPQSSYELEWESGPWYPLLASSFAEEIFLTITTTLLHSTRWVEAGHVVSSS 773

Query: 402 -----TPRVDMSSLTKLEKAKALFE 421
                T R  +  + K   AK L E
Sbjct: 774 QVQLPTTRKILPHVIKTTDAKVLIE 798

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255543993|ref|XP_002513059.1| beta-galactosidase, putative [Ricinus communis] gi|223548070|gb|EEF49562.1| beta-galactosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224072889|ref|XP_002303929.1| predicted protein [Populus trichocarpa] gi|222841361|gb|EEE78908.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359495000|ref|XP_003634896.1| PREDICTED: beta-galactosidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|225465868|ref|XP_002266400.1| PREDICTED: beta-galactosidase isoform 1 [Vitis vinifera] gi|296090332|emb|CBI40151.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449449270|ref|XP_004142388.1| PREDICTED: beta-galactosidase-like [Cucumis sativus] gi|449487140|ref|XP_004157508.1| PREDICTED: beta-galactosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356548875|ref|XP_003542824.1| PREDICTED: beta-galactosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357515121|ref|XP_003627849.1| Beta Galactosidase-like protein [Medicago truncatula] gi|355521871|gb|AET02325.1| Beta Galactosidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|79314957|ref|NP_001030858.1| beta-galactosidase [Arabidopsis thaliana] gi|332645710|gb|AEE79231.1| beta-galactosidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22331783|ref|NP_680128.1| beta-galactosidase [Arabidopsis thaliana] gi|20147224|gb|AAM10327.1| At3g54435 [Arabidopsis thaliana] gi|332645709|gb|AEE79230.1| beta-galactosidase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query620
UNIPROTKB|P007221024 lacZ "beta-galactosidase monom 0.532 0.322 0.555 5e-125
ASPGD|ASPL0000040482 1030 lacD [Emericella nidulans (tax 0.332 0.2 0.419 3e-91
UNIPROTKB|P06864 1030 ebgA "evolved beta-D-galactosi 0.535 0.322 0.406 5.9e-86
ASPGD|ASPL0000047652 1023 lacF [Emericella nidulans (tax 0.508 0.307 0.440 3.6e-84
UNIPROTKB|Q4FAT7652 GUSB "Beta-glucuronidase" [Sus 0.311 0.296 0.323 2.2e-17
UNIPROTKB|A3KMY8652 GUSB "Uncharacterized protein" 0.319 0.303 0.333 4.7e-17
UNIPROTKB|E9PCV0505 GUSB "Beta-glucuronidase" [Hom 0.306 0.376 0.305 9.2e-16
UNIPROTKB|P08236651 GUSB "Beta-glucuronidase" [Hom 0.301 0.287 0.324 1.3e-15
UNIPROTKB|G1K299651 GUSB "Beta-glucuronidase" [Can 0.256 0.244 0.358 1.7e-15
UNIPROTKB|O18835651 GUSB "Beta-glucuronidase" [Can 0.256 0.244 0.358 1.7e-15
UNIPROTKB|P00722 lacZ "beta-galactosidase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
 Score = 996 (355.7 bits), Expect = 5.0e-125, Sum P(2) = 5.0e-125
 Identities = 191/344 (55%), Positives = 232/344 (67%)

Query:     2 PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRH 61
             P+LWSAE PNLY  VV L  A G +++ E+C VG R+V      LL+NG P++IRGVNRH
Sbjct:   299 PKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRH 358

Query:    62 EHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIET 121
             EHHP  G+   E  MV+D++LMKQNN NAVR SHYP HP WY LCD +GLY++DEANIET
Sbjct:   359 EHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIET 418

Query:   122 HGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGW 181
             HG      L   T +P W  AM +RV  MV+RD+NH S+I WSLGNE+GHG NH A   W
Sbjct:   419 HGMVPMNRL---TDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRW 475

Query:   182 IRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRV-----------WDIVMIAKDPTETRPLI 230
             I+  DPSR + YEGGG+ T +TDI+CPMY RV           W I      P ETRPLI
Sbjct:   476 IKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLI 535

Query:   231 LCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGD 290
             LCEY+HAMGNS G   +YW+A      LQGGF+WDWVDQ L++   +G    AYGGDFGD
Sbjct:   536 LCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGD 595

Query:   291 TPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKV 334
             TPND  FC+NGL++ DRTPHPAL E K+  Q  +  L   T++V
Sbjct:   596 TPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEV 639
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0031420 "alkali metal ion binding" evidence=IDA
GO:0000287 "magnesium ion binding" evidence=IDA
GO:0005990 "lactose catabolic process" evidence=IMP
GO:0009341 "beta-galactosidase complex" evidence=IEA;IDA
GO:0004565 "beta-galactosidase activity" evidence=IEA;IDA
ASPGD|ASPL0000040482 lacD [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|P06864 ebgA "evolved beta-D-galactosidase, alpha subunit; cryptic gene" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
ASPGD|ASPL0000047652 lacF [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q4FAT7 GUSB "Beta-glucuronidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A3KMY8 GUSB "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E9PCV0 GUSB "Beta-glucuronidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P08236 GUSB "Beta-glucuronidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G1K299 GUSB "Beta-glucuronidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O18835 GUSB "Beta-glucuronidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.230.737
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
OsI_05227
Putative uncharacterized protein (908 aa)
(Oryza sativa Indica)
Predicted Functional Partners:
OsI_27268
Os07g0669100 (478 aa)
     •• 0.820
OsI_17316
Os04g0608100 (462 aa)
•    •• 0.771
OsI_14033
Os03g0812000 (950 aa)
      • 0.704
P5CS
Delta-1-pyrroline-5-carboxylate synthetase (P5CS) [Includes- Glutamate 5-kinase (EC 2.7.2.11) ( [...] (755 aa)
      • 0.692
OsI_14192
Os03g0832600 (506 aa)
•    •• 0.653
OsI_08616
Chloroplast ornithine carbamoyltransferase (Fragment) (364 aa)
      • 0.611
BGIOSIBCE012907
annotation not avaliable (101 aa)
 •      0.590
Fe-SOD
Os06g0143000 ; Destroys radicals which are normally produced within the cells and which are tox [...] (255 aa)
      • 0.540
BGIOSIBCE027121
Putative uncharacterized protein (519 aa)
      • 0.507
BGIOSIBSE038426
annotation not avaliable (417 aa)
      • 0.504

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query620
PRK09525 1027 PRK09525, lacZ, beta-D-galactosidase; Reviewed 1e-172
pfam02836297 pfam02836, Glyco_hydro_2_C, Glycosyl hydrolases fa 1e-115
PRK10340 1021 PRK10340, ebgA, cryptic beta-D-galactosidase subun 1e-111
COG3250808 COG3250, LacZ, Beta-galactosidase/beta-glucuronida 1e-106
smart01038272 smart01038, Bgal_small_N, Beta galactosidase small 1e-95
pfam02929274 pfam02929, Bgal_small_N, Beta galactosidase small 8e-76
PRK095251027 PRK09525, lacZ, beta-D-galactosidase; Reviewed 3e-43
PRK103401021 PRK10340, ebgA, cryptic beta-D-galactosidase subun 8e-38
PRK10150604 PRK10150, PRK10150, beta-D-glucuronidase; Provisio 5e-23
pfam00703109 pfam00703, Glyco_hydro_2, Glycosyl hydrolases fami 3e-07
>gnl|CDD|236548 PRK09525, lacZ, beta-D-galactosidase; Reviewed Back     alignment and domain information 
 Score =  517 bits (1335), Expect = e-172
 Identities = 193/341 (56%), Positives = 232/341 (68%), Gaps = 14/341 (4%)

Query: 2   PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRH 61
           P+LWSAE PNLY  VV L  A G +++ E+  VG R+V      L +NG P++IRGVNRH
Sbjct: 299 PKLWSAETPNLYRAVVSLLDADGTLIEAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRH 358

Query: 62  EHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIET 121
           EHHP  G+   E  MV+D++LMKQ+N NAVR SHYP HP WYELCD +GLY++DEANIET
Sbjct: 359 EHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWYELCDRYGLYVVDEANIET 418

Query: 122 HGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGW 181
           HG      L   + +P W  AM +RV  MV+RD+NH SII WSLGNE+GHG NH A   W
Sbjct: 419 HGMVPMNRL---SDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRW 475

Query: 182 IRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRV-----------WDIVMIAKDPTETRPLI 230
           I+  DPSR + YEGGG+ T +TDI+CPMY RV           W I      P ETRPLI
Sbjct: 476 IKSNDPSRPVQYEGGGADTAATDIICPMYARVDEDQPFPAVPKWSIKKWISLPGETRPLI 535

Query: 231 LCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGD 290
           LCEY+HAMGNS G   +YW+A      LQGGFIWDWVDQGL +   +G   WAYGGDFGD
Sbjct: 536 LCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGD 595

Query: 291 TPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGT 331
           TPND  FC+NGL++PDRTPHPAL+E K+  Q  + SL   T
Sbjct: 596 TPNDRQFCMNGLVFPDRTPHPALYEAKHAQQFFQFSLLSTT 636

Length = 1027
>gnl|CDD|217247 pfam02836, Glyco_hydro_2_C, Glycosyl hydrolases family 2, TIM barrel domain Back     alignment and domain information
>gnl|CDD|236673 PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>gnl|CDD|225789 COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|214988 smart01038, Bgal_small_N, Beta galactosidase small chain Back     alignment and domain information
>gnl|CDD|111779 pfam02929, Bgal_small_N, Beta galactosidase small chain Back     alignment and domain information
>gnl|CDD|236548 PRK09525, lacZ, beta-D-galactosidase; Reviewed Back     alignment and domain information
>gnl|CDD|236673 PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>gnl|CDD|236657 PRK10150, PRK10150, beta-D-glucuronidase; Provisional Back     alignment and domain information
>gnl|CDD|216070 pfam00703, Glyco_hydro_2, Glycosyl hydrolases family 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 620
PRK095251027 lacZ beta-D-galactosidase; Reviewed 100.0
PRK103401021 ebgA cryptic beta-D-galactosidase subunit alpha; R 100.0
COG3250808 LacZ Beta-galactosidase/beta-glucuronidase [Carboh 100.0
PF02929276 Bgal_small_N: Beta galactosidase small chain; Inte 100.0
PRK10150604 beta-D-glucuronidase; Provisional 100.0
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 100.0
KOG2230867 consensus Predicted beta-mannosidase [Carbohydrate 99.78
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 99.72
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 99.51
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 99.3
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 99.28
PLN03059 840 beta-galactosidase; Provisional 99.25
COG3934587 Endo-beta-mannanase [Carbohydrate transport and me 99.09
COG1874673 LacA Beta-galactosidase [Carbohydrate transport an 98.8
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 98.45
PF14488166 DUF4434: Domain of unknown function (DUF4434) 98.19
KOG0496649 consensus Beta-galactosidase [Carbohydrate transpo 98.19
PF13204289 DUF4038: Protein of unknown function (DUF4038); PD 98.18
PF1287688 Cellulase-like: Sugar-binding cellulase-like; Inte 98.11
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.03
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 97.55
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 97.54
PF00331320 Glyco_hydro_10: Glycosyl hydrolase family 10; Inte 97.51
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 97.32
PF01229486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 96.77
TIGR03356427 BGL beta-galactosidase. 96.11
COG2730407 BglC Endoglucanase [Carbohydrate transport and met 95.79
PRK13511469 6-phospho-beta-galactosidase; Provisional 95.23
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 95.18
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 94.81
COG3693345 XynA Beta-1,4-xylanase [Carbohydrate transport and 94.56
COG2723460 BglB Beta-glucosidase/6-phospho-beta-glucosidase/b 93.7
COG3534501 AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra 93.54
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 93.36
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 92.77
PLN02998497 beta-glucosidase 92.74
PLN02814504 beta-glucosidase 92.63
PLN02849503 beta-glucosidase 92.6
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 91.91
KOG2024297 consensus Beta-Glucuronidase GUSB (glycosylhydrola 89.93
PF03659386 Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int 82.15
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=4.1e-152  Score=1340.23  Aligned_cols=577  Identities=47%  Similarity=0.817  Sum_probs=531.0

Q ss_pred             CCcCCCCCCCCcEEEEEEEEeCCCCeEEEEEEEEeEEEEEEECCEEEECCEEEEEEeeecCCCCCCCCCCCCHHHHHHHH
Q 007038            1 MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDL   80 (620)
Q Consensus         1 ~p~lWs~e~P~LY~l~~~l~~~~g~~~d~~~~~~GfR~iei~~~~f~lNGkpi~lrGvn~h~~~p~~G~~~~~e~~~~Dl   80 (620)
                      +|+|||+|+|+||+|+++|.+++|+++|+++++||||+|++++++|+|||+||+|||+|+|+++|..|++++++.|++||
T Consensus       298 ~p~lWs~e~P~LY~l~v~l~~~~g~v~d~~~~~~GfR~iei~~~~f~LNGkpi~lrGvn~h~~~p~~G~a~t~e~~~~di  377 (1027)
T PRK09525        298 NPKLWSAETPNLYRAVVSLLDADGTLIEAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDI  377 (1027)
T ss_pred             CCCcCCCCCCeeEEEEEEEEeCCCcEEEEEEeeEEEEEEEEECCEEEECCEEEEEEEeEccccCcccCccCCHHHHHHHH
Confidence            69999999999999999998778999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCcEEEccCCCChhHHHHHHhhcCCeEEeeccccccCcccccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCceE
Q 007038           81 VLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASI  160 (620)
Q Consensus        81 ~lmK~~g~NavR~~h~p~~~~~~dlcDe~Gi~V~~E~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~mV~r~rNHPSI  160 (620)
                      ++||++|+|+||+||||++++||++|||+|||||+|+++++||+.+...   +.++|.|.+++++++++||+|+||||||
T Consensus       378 ~lmK~~g~NaVR~sHyP~~p~fydlcDe~GilV~dE~~~e~hg~~~~~~---~~~dp~~~~~~~~~~~~mV~RdrNHPSI  454 (1027)
T PRK09525        378 LLMKQHNFNAVRCSHYPNHPLWYELCDRYGLYVVDEANIETHGMVPMNR---LSDDPRWLPAMSERVTRMVQRDRNHPSI  454 (1027)
T ss_pred             HHHHHCCCCEEEecCCCCCHHHHHHHHHcCCEEEEecCccccCCccccC---CCCCHHHHHHHHHHHHHHHHhCCCCCEE
Confidence            9999999999999999999999999999999999999999999753222   3678999999999999999999999999


Q ss_pred             EEEecCCCCCCCccHHHHHHHHHHhCCCCeEecCCCCCCCCCcceecCCCCcHH-----------HHHHHHhCCCCCCcE
Q 007038          161 ICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVW-----------DIVMIAKDPTETRPL  229 (620)
Q Consensus       161 i~WslgNE~~~g~~~~~~~~~ik~~DptRpv~~~~~~~~~~~~Di~~~~Y~~~~-----------~~~~~~~~~~~~kP~  229 (620)
                      |+||+|||++.+.++.+|++++|++||||||+|++++.....+|+++.||++++           .+++|++.+..+||+
T Consensus       455 i~WSlgNE~~~g~~~~~l~~~~k~~DptRpV~y~~~~~~~~~~Dv~~~my~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~  534 (1027)
T PRK09525        455 IIWSLGNESGHGANHDALYRWIKSNDPSRPVQYEGGGADTAATDIICPMYARVDEDQPFPAVPKWSIKKWISLPGETRPL  534 (1027)
T ss_pred             EEEeCccCCCcChhHHHHHHHHHhhCCCCcEEECCCCCCCCccccccCCCCCccccccccccchHHHHHHHhcCCCCCCE
Confidence            999999999999999999999999999999999976544567999999998874           577888765557999


Q ss_pred             EEeccCCccCCCCccHHHHHHHHHhcCCeeeeeeecccccceeeeeCCCcEEEeecCCCCCCCCCcccccCceecCCCCC
Q 007038          230 ILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTP  309 (620)
Q Consensus       230 i~~Eygh~~gns~g~~~~y~~~~~~~~~~~G~fiW~~~D~~~~~~~~~g~~~~~yggd~~~~~~d~~f~~~Glv~~dR~p  309 (620)
                      |+|||||+|||+.|++++||++++++|.++|||||+|+|||+.+.+++|+.||+||||||+.|||+|||+||||.+||+|
T Consensus       535 i~cEY~Hamgn~~g~l~~yw~~~~~~~~~~GgfIW~w~Dqg~~~~~~~G~~~~~YGGDfgd~p~d~nFc~dGlv~~dR~p  614 (1027)
T PRK09525        535 ILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFPDRTP  614 (1027)
T ss_pred             EEEechhcccCcCccHHHHHHHHhcCCCeeEEeeEeccCcceeeECCCCCEEEEECCcCCCCCCCCCceeceeECCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccHHHHHHhcccEEEEEcC---CeE------------------------------------------------------
Q 007038          310 HPALHEVKYVYQAIKVSLKK---GTL------------------------------------------------------  332 (620)
Q Consensus       310 k~~~~e~k~~~~~~~~~~~~---~~~------------------------------------------------------  332 (620)
                      +|+++|+|++||||+|+..+   ++|                                                      
T Consensus       615 ~p~~~E~K~v~qpv~~~~~~~~~~~~~i~N~~~F~~l~~~~~~w~~~~~G~~~~~g~~~~~~~p~~~~~i~l~~~~~~~~  694 (1027)
T PRK09525        615 HPALYEAKHAQQFFQFSLLSTTPLTIEVTSEYLFRHSDNELLHWSVALDGKPLASGEVPLDLAPQGSQRITLPELPQPES  694 (1027)
T ss_pred             CccHHHHHhhcCcEEEEEccCCCcEEEEEEcccCCcccccEEEEEEEECCEEEEeeeEccccCCCCceEEecCCCCCCCC
Confidence            99999999999999997643   223                                                      


Q ss_pred             ------------------------------------------------------------------------------EE
Q 007038          333 ------------------------------------------------------------------------------KV  334 (620)
Q Consensus       333 ------------------------------------------------------------------------------~~  334 (620)
                                                                                                    .+
T Consensus       695 ~~e~~l~~~~~~~~~~~~a~~g~~va~~Q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~f~~~~G~l~s~~~  774 (1027)
T PRK09525        695 AGQLWLNVEVVQPNATAWSEAGHRSAWQQWRLPEPLSLPLPTASHAAPQLTQDEQDFCIELGNQRWQFNRQSGLLSQWWV  774 (1027)
T ss_pred             CceEEEEEEEEECCCCcccCCCCEEEEEEEEeccCcccccccccCCCceEEEcCCeEEEEECCEEEEEECCCceEEEEEE
Confidence                                                                                          45


Q ss_pred             CCEeeeecCCCCCeeeecCCCCCCCCCccc------chhhHhcCccceeEEEEEEEEEEeCCceEEEEEEEEeccccccc
Q 007038          335 EGVSVMKRGIFPCFWRAPTDNDKGGGESSY------YSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMS  408 (620)
Q Consensus       335 ~g~~ll~~~~~~~~wRaptdND~~~~~~~~------~~~W~~ag~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  408 (620)
                      +|+++|.++|+|||||||||||+|.++...      ...|++||+++++.++.++++...++. ++|++++.+...    
T Consensus       775 ~g~~~l~~~~~~~~wRaptdND~g~~~~~~~~~~~~~~~w~~ag~~~~~~~~~~~~~~~~~~~-v~v~~~~~~~~~----  849 (1027)
T PRK09525        775 GGKEQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGLYQLEARLLQCDADTLADA-VLITTEHAYQHQ----  849 (1027)
T ss_pred             CCEEeeccCCcCceECCCcccCcCccccccccccchHHHHHHcCCccceeEEEEEEEEecCCe-EEEEEEEEeecC----
Confidence            789999999999999999999998755322      368999999999999998887665554 467776555221    


Q ss_pred             hhhhhhhccceeEEEEEEEEecCceEEEEEEEeeCCCCCCCcceeeEEEEecCCCCceEEEeCCCCCCccchhcCcccee
Q 007038          409 SLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDV  488 (620)
Q Consensus       409 ~~~~~~~~~~~~~~~~~Y~i~~~G~i~v~~~~~~~~~~~p~lpRiG~~~~lp~~~~~v~wyGrGP~EnY~DRk~~a~~G~  488 (620)
                             ....++++++|+|+++|.|.|++++.+. +.+|.||||||+|.||++|++|+||||||+|||+|||+||++|+
T Consensus       850 -------~~~~~~~~~~y~i~~~G~i~v~~~~~~~-~~~p~lPRiG~~~~lp~~~~~v~wyGrGP~EnY~Drk~~a~~G~  921 (1027)
T PRK09525        850 -------GKTLFISRKTYRIDGQGEMTIDVDVEVA-SDLPPPARIGLTCQLAQVAERVSWLGLGPHENYPDRLLAACFGR  921 (1027)
T ss_pred             -------CCccEEEEEEEEEeCCCEEEEEEEEEeC-CCCCCCceEEEEEECCccccccEEECCCCCCChhhhhhcCcEeE
Confidence                   1223678899999999999999999998 77899999999999999999999999999999999999999999


Q ss_pred             eccccccccccccCccCCCCccceeEEEEeeCCCceEEEEecCCCCCeeEEEecCCHHHHhccCCCCCCCCCCeEEEEEc
Q 007038          489 YEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLD  568 (620)
Q Consensus       489 y~~tv~~~~~~Yv~PQE~Gnr~dvrw~~l~~~~g~gl~i~~~~~~~~~~fsa~~yt~~~l~~a~H~~eL~~~~~~~l~iD  568 (620)
                      |+++|++||+||++|||||||+||||++|+     ||.|+   +  .|+|||+|||+++|++|+|++||++++.|+||||
T Consensus       922 y~~~V~~~~~pYv~PQEnGnr~dvrw~~l~-----~l~v~---~--~~~fsa~~yt~~~L~~a~H~~eL~~~~~~~l~iD  991 (1027)
T PRK09525        922 WDLPLSDMHTPYIFPSENGLRCGTRELNYG-----RHQIR---G--DFHFNISRYSQQQLMETSHRHLLQAEEGTWLNID  991 (1027)
T ss_pred             ECCcHHHhCCCCCCccCCCCccceEEEEEc-----CeEEE---e--eeeEEecCCCHHHHHhCcCHhhCCCCCCEEEEEC
Confidence            999999999999999999999999999994     58887   4  3999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCccccCccEEEEEEEEe
Q 007038          569 HKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSP  603 (620)
Q Consensus       569 ~~q~GvGg~~ScGp~~~~~Y~l~~~~~~~~f~i~p  603 (620)
                      ++||||||+|||||.||++|+|+.++|+|+|+|+-
T Consensus       992 ~~q~GvGg~~S~g~~~~~~y~~~~~~~~~~f~~~~ 1026 (1027)
T PRK09525        992 GFHMGVGGDDSWSPSVHPEFLLSAGRYHYQLTWCQ 1026 (1027)
T ss_pred             cccCCCCCCCCCCCCCCHHHCCCCCcEEEEEEEEe
Confidence            99999999999999999999999999999999863

>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02929 Bgal_small_N: Beta galactosidase small chain; InterPro: IPR004199 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D Back     alignment and domain information
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>KOG2024 consensus Beta-Glucuronidase GUSB (glycosylhydrolase superfamily 2) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query620
3muz_11052 E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex 1e-103
3muz_11052 E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex 4e-24
1f49_A1023 E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained 1e-103
1f49_A1023 E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained 3e-24
3t0a_A1052 E. Coli (Lacz) Beta-Galactosidase (S796t) Length = 1e-103
3t0a_A1052 E. Coli (Lacz) Beta-Galactosidase (S796t) Length = 5e-24
3sep_A1052 E. Coli (Lacz) Beta-Galactosidase (S796a) Length = 1e-103
3sep_A1052 E. Coli (Lacz) Beta-Galactosidase (S796a) Length = 3e-24
1bgm_I1023 Beta-Galactosidase (Chains I-P) Length = 1023 1e-103
1bgm_I1023 Beta-Galactosidase (Chains I-P) Length = 1023 4e-24
3t2o_A1052 E. Coli (Lacz) Beta-Galactosidase (S796d) Length = 1e-103
3t2o_A1052 E. Coli (Lacz) Beta-Galactosidase (S796d) Length = 5e-24
1jz7_A1023 E. Coli (Lacz) Beta-Galactosidase In Complex With G 1e-103
1jz7_A1023 E. Coli (Lacz) Beta-Galactosidase In Complex With G 4e-24
3muy_11023 E. Coli (Lacz) Beta-Galactosidase (R599a) Length = 1e-103
3muy_11023 E. Coli (Lacz) Beta-Galactosidase (R599a) Length = 4e-24
1f4a_A1021 E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained 1e-103
1f4a_A1021 E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained 4e-24
1px3_A1023 E. Coli (Lacz) Beta-Galactosidase (G794a) Length = 1e-103
1px3_A1023 E. Coli (Lacz) Beta-Galactosidase (G794a) Length = 2e-23
1dp0_A1023 E. Coli Beta-Galactosidase At 1.7 Angstrom Length = 1e-103
1dp0_A1023 E. Coli Beta-Galactosidase At 1.7 Angstrom Length = 4e-24
1jz8_A1023 E. Coli (lacz) Beta-galactosidase (e537q) In Comple 1e-103
1jz8_A1023 E. Coli (lacz) Beta-galactosidase (e537q) In Comple 4e-24
3iap_A1023 E. Coli (Lacz) Beta-Galactosidase (E416q) Length = 1e-103
3iap_A1023 E. Coli (Lacz) Beta-Galactosidase (E416q) Length = 4e-24
3vd3_A1052 E. Coli (Lacz) Beta-Galactosidase (N460d) Length = 1e-103
3vd3_A1052 E. Coli (Lacz) Beta-Galactosidase (N460d) Length = 4e-24
3vd5_A1052 E. Coli (Lacz) Beta-Galactosidase (N460s) Length = 1e-103
3vd5_A1052 E. Coli (Lacz) Beta-Galactosidase (N460s) Length = 4e-24
3vda_A1052 E. Coli (Lacz) Beta-Galactosidase (N460t) Length = 1e-103
3vda_A1052 E. Coli (Lacz) Beta-Galactosidase (N460t) Length = 4e-24
3czj_A1023 "e. Coli (Lacz) Beta-Galactosidase (N460t) In Compl 1e-103
3czj_A1023 "e. Coli (Lacz) Beta-Galactosidase (N460t) In Compl 4e-24
3dyo_A1023 E. Coli (Lacz) Beta-Galactosidase (H418n) In Comple 1e-103
3dyo_A1023 E. Coli (Lacz) Beta-Galactosidase (H418n) In Comple 4e-24
3i3b_A1023 E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex 1e-103
3i3b_A1023 E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex 4e-24
3dym_A1023 E. Coli (Lacz) Beta-Galactosidase (H418e) Length = 1e-102
3dym_A1023 E. Coli (Lacz) Beta-Galactosidase (H418e) Length = 4e-24
3iaq_A1023 E. Coli (Lacz) Beta-Galactosidase (E416v) Length = 1e-102
3iaq_A1023 E. Coli (Lacz) Beta-Galactosidase (E416v) Length = 4e-24
3dec_A1000 Crystal Structure Of A Glycosyl Hydrolases Family 2 2e-76
3dec_A1000 Crystal Structure Of A Glycosyl Hydrolases Family 2 7e-22
3bga_A1010 Crystal Structure Of Beta-Galactosidase From Bacter 3e-76
3bga_A1010 Crystal Structure Of Beta-Galactosidase From Bacter 7e-21
3ob8_A1032 Structure Of The Beta-Galactosidase From Kluyveromy 3e-69
3ob8_A1032 Structure Of The Beta-Galactosidase From Kluyveromy 6e-14
1yq2_A 1024 Beta-Galactosidase From Arthrobacter Sp. C2-2 (Isoe 6e-67
1yq2_A1024 Beta-Galactosidase From Arthrobacter Sp. C2-2 (Isoe 2e-15
1bhg_A613 Human Beta-Glucuronidase At 2.6 A Resolution Length 6e-20
3gm8_A801 Crystal Structure Of A Beta-glycosidase From Bacter 1e-18
3k46_A605 Crystal Structure Of Full-Length E. Coli Beta-Glucu 3e-14
3cmg_A667 Crystal Structure Of Putative Beta-Galactosidase Fr 9e-13
3k4a_A605 Crystal Structure Of Selenomethionine Substituted E 9e-13
3lpf_A605 Structure Of E. Coli Beta-Glucuronidase Bound With 1e-12
3fn9_A692 Crystal Structure Of Putative Beta-galactosidase Fr 3e-06
>pdb|3MUZ|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With Iptg Length = 1052 Back     alignment and structure 
Iteration: 1

 Score =  374 bits (959), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/344 (55%), Positives = 232/344 (67%), Gaps = 14/344 (4%)
Query: 2   PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRH 61
           P+LWSAE PNLY  VV L  A G +++ E+C VG R+V      LL+NG P++IRGVNRH
Sbjct: 327 PKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRH 386
Query: 62  EHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIET 121
           EHHP  G+   E  MV+D++LMKQNN NAVR SHYP HP WY LCD +GLY++DEANIET
Sbjct: 387 EHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIET 446
Query: 122 HGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGW 181
           HG      L   T +P W  AM +RV  MV+RD+NH S+I WSLGNE+GHG NH A   W
Sbjct: 447 HGMVPMNRL---TDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRW 503
Query: 182 IRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRV-----------WDIVMIAKDPTETRPLI 230
           I+  DPSR + YEGGG+ T +TDI+CPMY RV           W I      P ETRPLI
Sbjct: 504 IKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLI 563
Query: 231 LCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGD 290
           LCEY+HAMGNS G   +YW+A      LQGGF+WDWVDQ L++   +G    AYGGDFGD
Sbjct: 564 LCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGD 623
Query: 291 TPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKV 334
           TPND  FC+NGL++ DRTPHPAL E K+  Q  +  L   T++V
Sbjct: 624 TPNDAQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEV 667
>pdb|3MUZ|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With Iptg Length = 1052 Back     alignment and structure
>pdb|1F49|A Chain A, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained Monomer- Monoclinic) Length = 1023 Back     alignment and structure
>pdb|1F49|A Chain A, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained Monomer- Monoclinic) Length = 1023 Back     alignment and structure
>pdb|3T0A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796t) Length = 1052 Back     alignment and structure
>pdb|3T0A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796t) Length = 1052 Back     alignment and structure
>pdb|3SEP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a) Length = 1052 Back     alignment and structure
>pdb|3SEP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a) Length = 1052 Back     alignment and structure
>pdb|1BGM|I Chain I, Beta-Galactosidase (Chains I-P) Length = 1023 Back     alignment and structure
>pdb|1BGM|I Chain I, Beta-Galactosidase (Chains I-P) Length = 1023 Back     alignment and structure
>pdb|3T2O|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d) Length = 1052 Back     alignment and structure
>pdb|3T2O|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d) Length = 1052 Back     alignment and structure
>pdb|1JZ7|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose Length = 1023 Back     alignment and structure
>pdb|1JZ7|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose Length = 1023 Back     alignment and structure
>pdb|3MUY|1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) Length = 1023 Back     alignment and structure
>pdb|3MUY|1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) Length = 1023 Back     alignment and structure
>pdb|1F4A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained Monomer- Orthorhombic) Length = 1021 Back     alignment and structure
>pdb|1F4A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained Monomer- Orthorhombic) Length = 1021 Back     alignment and structure
>pdb|1PX3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (G794a) Length = 1023 Back     alignment and structure
>pdb|1PX3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (G794a) Length = 1023 Back     alignment and structure
>pdb|1DP0|A Chain A, E. Coli Beta-Galactosidase At 1.7 Angstrom Length = 1023 Back     alignment and structure
>pdb|1DP0|A Chain A, E. Coli Beta-Galactosidase At 1.7 Angstrom Length = 1023 Back     alignment and structure
>pdb|1JZ8|A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose Length = 1023 Back     alignment and structure
>pdb|1JZ8|A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose Length = 1023 Back     alignment and structure
>pdb|3IAP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416q) Length = 1023 Back     alignment and structure
>pdb|3IAP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416q) Length = 1023 Back     alignment and structure
>pdb|3VD3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460d) Length = 1052 Back     alignment and structure
>pdb|3VD3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460d) Length = 1052 Back     alignment and structure
>pdb|3VD5|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s) Length = 1052 Back     alignment and structure
>pdb|3VD5|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s) Length = 1052 Back     alignment and structure
>pdb|3VDA|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t) Length = 1052 Back     alignment and structure
>pdb|3VDA|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t) Length = 1052 Back     alignment and structure
>pdb|3CZJ|A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" Length = 1023 Back     alignment and structure
>pdb|3CZJ|A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" Length = 1023 Back     alignment and structure
>pdb|3DYO|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With Iptg Length = 1023 Back     alignment and structure
>pdb|3DYO|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With Iptg Length = 1023 Back     alignment and structure
>pdb|3I3B|A Chain A, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With D- Galactopyranosyl-1-On Length = 1023 Back     alignment and structure
>pdb|3I3B|A Chain A, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With D- Galactopyranosyl-1-On Length = 1023 Back     alignment and structure
>pdb|3DYM|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418e) Length = 1023 Back     alignment and structure
>pdb|3DYM|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418e) Length = 1023 Back     alignment and structure
>pdb|3IAQ|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416v) Length = 1023 Back     alignment and structure
>pdb|3IAQ|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416v) Length = 1023 Back     alignment and structure
>pdb|3DEC|A Chain A, Crystal Structure Of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron Length = 1000 Back     alignment and structure
>pdb|3DEC|A Chain A, Crystal Structure Of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron Length = 1000 Back     alignment and structure
>pdb|3BGA|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacteroides Thetaiotaomicron Vpi-5482 Length = 1010 Back     alignment and structure
>pdb|3BGA|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacteroides Thetaiotaomicron Vpi-5482 Length = 1010 Back     alignment and structure
>pdb|3OB8|A Chain A, Structure Of The Beta-Galactosidase From Kluyveromyces Lactis In Complex With Galactose Length = 1032 Back     alignment and structure
>pdb|3OB8|A Chain A, Structure Of The Beta-Galactosidase From Kluyveromyces Lactis In Complex With Galactose Length = 1032 Back     alignment and structure
>pdb|1YQ2|A Chain A, Beta-Galactosidase From Arthrobacter Sp. C2-2 (Isoenzyme C2- 2-1) Length = 1024 Back     alignment and structure
>pdb|1YQ2|A Chain A, Beta-Galactosidase From Arthrobacter Sp. C2-2 (Isoenzyme C2- 2-1) Length = 1024 Back     alignment and structure
>pdb|1BHG|A Chain A, Human Beta-Glucuronidase At 2.6 A Resolution Length = 613 Back     alignment and structure
>pdb|3GM8|A Chain A, Crystal Structure Of A Beta-glycosidase From Bacteroides Vulgatus Length = 801 Back     alignment and structure
>pdb|3K46|A Chain A, Crystal Structure Of Full-Length E. Coli Beta-Glucuronidase Length = 605 Back     alignment and structure
>pdb|3CMG|A Chain A, Crystal Structure Of Putative Beta-Galactosidase From Bacteroides Fragilis Length = 667 Back     alignment and structure
>pdb|3K4A|A Chain A, Crystal Structure Of Selenomethionine Substituted E. Coli Beta- Glucuronidase Length = 605 Back     alignment and structure
>pdb|3LPF|A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1, 2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea Length = 605 Back     alignment and structure
>pdb|3FN9|A Chain A, Crystal Structure Of Putative Beta-galactosidase From Bacteroides Fragilis Length = 692 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query620
1jz7_A1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 1e-163
1jz7_A1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 2e-80
3bga_A1010 Beta-galactosidase; NYSGXRC, protein structure ini 1e-157
3bga_A1010 Beta-galactosidase; NYSGXRC, protein structure ini 3e-82
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 1e-155
1yq2_A1024 Beta-galactosidase; glycosyl hydrolase family 2, T 3e-70
3oba_A1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 1e-150
3oba_A1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 3e-70
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 1e-134
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 1e-119
3gm8_A801 Glycoside hydrolase family 2, candidate beta-GLYC; 1e-94
3cmg_A667 Putative beta-galactosidase; structural genomics, 6e-57
3fn9_A692 Putative beta-galactosidase; structural genomics, 3e-46
2vzs_A1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 6e-39
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 3e-25
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 5e-16
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 4e-06
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Length = 1023 Back     alignment and structure
 Score =  492 bits (1269), Expect = e-163
 Identities = 190/345 (55%), Positives = 232/345 (67%), Gaps = 14/345 (4%)

Query: 2   PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRH 61
           P+LWSAE PNLY  VV L  A G +++ E+C VG R+V      LL+NG P++IRGVNRH
Sbjct: 298 PKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRH 357

Query: 62  EHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIET 121
           EHHP  G+   E  MV+D++LMKQNN NAVR SHYP HP WY LCD +GLY++DEANIET
Sbjct: 358 EHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIET 417

Query: 122 HGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGW 181
           HG      +   T +P W  AM +RV  MV+RD+NH S+I WSLGNE+GHG NH A   W
Sbjct: 418 HGMVP---MNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRW 474

Query: 182 IRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRV-----------WDIVMIAKDPTETRPLI 230
           I+  DPSR + YEGGG+ T +TDI+CPMY RV           W I      P ETRPLI
Sbjct: 475 IKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLI 534

Query: 231 LCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGD 290
           LCEY+HAMGNS G   +YW+A      LQGGF+WDWVDQ L++   +G    AYGGDFGD
Sbjct: 535 LCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGD 594

Query: 291 TPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKVE 335
           TPND  FC+NGL++ DRTPHPAL E K+  Q  +  L   T++V 
Sbjct: 595 TPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVT 639
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Length = 1023 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Length = 1010 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Length = 1010 Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Length = 1024 Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Length = 1024 Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Length = 1032 Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Length = 1032 Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Length = 605 Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Length = 613 Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Length = 801 Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Length = 667 Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Length = 692 Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Length = 1032 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Length = 848 Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query620
3oba_A1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 100.0
1jz7_A1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 100.0
3bga_A1010 Beta-galactosidase; NYSGXRC, protein structure ini 100.0
1yq2_A1024 Beta-galactosidase; glycosyl hydrolase family 2, T 100.0
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 100.0
3cmg_A667 Putative beta-galactosidase; structural genomics, 100.0
3fn9_A692 Putative beta-galactosidase; structural genomics, 100.0
3gm8_A801 Glycoside hydrolase family 2, candidate beta-GLYC; 100.0
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 100.0
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 100.0
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 100.0
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 100.0
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 100.0
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 100.0
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 99.98
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 99.96
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 99.96
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 99.95
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 99.94
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 99.93
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 99.93
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 99.92
3d3a_A612 Beta-galactosidase; protein structure initiative I 99.91
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 99.9
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 99.87
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 99.87
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 99.85
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 99.84
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 99.84
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 99.84
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 99.83
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 99.74
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 99.72
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 99.72
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 99.72
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 99.7
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 99.69
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 99.68
1kwg_A645 Beta-galactosidase; TIM barrel, glycoside hydrolas 99.68
3thd_A654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 99.6
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 99.57
4e8d_A595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 99.54
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 99.52
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 99.52
3tty_A675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 99.51
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 99.5
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 99.49
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 99.37
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.35
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.34
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 99.3
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 99.27
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 99.26
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 99.23
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 99.22
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 99.21
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.19
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 99.18
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 99.17
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 99.14
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 99.13
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 99.12
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 99.1
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 99.09
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 98.94
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 98.93
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 98.92
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 98.89
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 98.86
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 98.85
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 98.84
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 98.84
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 98.78
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.76
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.71
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 98.71
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 98.64
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 98.41
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 98.39
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 98.35
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 98.34
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 98.31
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 98.29
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 98.28
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 98.27
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 98.27
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 98.25
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 98.24
3kzs_A463 Glycosyl hydrolase family 5; structural genomics, 98.23
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 98.23
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 98.21
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 98.19
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 98.17
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 98.1
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 98.06
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 98.0
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 97.85
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 97.84
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 97.6
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 97.55
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 97.51
4ha4_A489 Beta-galactosidase; TIM barrel, beta-glycosidase, 97.51
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 97.47
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 97.41
1uwi_A489 Beta-galactosidase; hydrolase, beta-glycosidase, g 97.3
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 96.86
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 96.78
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 96.76
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 96.68
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 96.6
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 96.59
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 96.49
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 96.46
1cbg_A490 Cyanogenic beta-glucosidase; hydrolase (O-glycosyl 96.45
2e3z_A465 Beta-glucosidase; TIM barrel, glycoside hydrolase 96.43
2dga_A565 Beta-glucosidase; alpha/beta barrel, hydrolase; 1. 96.36
1v02_A565 Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri 96.35
2jf7_A532 Strictosidine-O-beta-D-glucosidase; alkaloid, hydr 96.01
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 95.99
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 95.75
3f5l_A481 Beta-glucosidase; beta-alpha-barrels, glycosidase, 95.49
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 95.04
3gnp_A488 OS03G0212800 protein; beta-alpha barrel, glycosida 95.01
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 94.85
3ptm_A505 Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly 94.55
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 94.49
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 94.39
4atd_A513 Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr 94.38
4dde_A480 6-phospho-beta-glucosidase; structural genomics, P 94.27
3gyc_A393 Putative glycoside hydrolase; YP_001304622.1, stru 94.07
2y24_A383 Xylanase; hydrolase, GH5 family, aldotetraouronic 93.47
4a3y_A540 Raucaffricine-O-beta-D-glucosidase; hydrolase, alk 92.45
3ug3_A504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 91.92
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 91.47
4acy_A382 Endo-alpha-mannosidase; hydrolase, endomannosidase 89.34
4ad1_A380 Glycosyl hydrolase family 71; glycoside hydrolase 88.16
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 87.84
2yih_A524 CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca 81.24
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 80.66
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
Probab=100.00  E-value=1.6e-149  Score=1320.63  Aligned_cols=578  Identities=36%  Similarity=0.615  Sum_probs=532.9

Q ss_pred             CCcCCCCCCCCcEEEEEEEEeCCCCeEEEEEEEEeEEEEEEECCEEEECCEEEEEEeeecCCCCCCCCCCCCHHHHHHHH
Q 007038            1 MPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDL   80 (620)
Q Consensus         1 ~p~lWs~e~P~LY~l~~~l~~~~g~~~d~~~~~~GfR~iei~~~~f~lNGkpi~lrGvn~h~~~p~~G~~~~~e~~~~Dl   80 (620)
                      +|+|||+|+|+||+|+++|.+.+|+++|+++++||||+|++++++|+||||||+|||+|+|+++|..|++++++.|++||
T Consensus       302 ~p~LWs~e~P~LY~l~v~l~~~~g~~~D~~~~~~GfR~iei~~~~f~lNGkpi~lkGvn~H~~~p~~G~a~~~e~~~~Di  381 (1032)
T 3oba_A          302 APEHWTAENPTLYKYQLDLIGSDGSVIQSIKHHVGFRQVELKDGNITVNGKDILFRGVNRHDHHPRFGRAVPLDFVVRDL  381 (1032)
T ss_dssp             SCCBBCSSSBCBEEEEEEEECTTSCEEEEEEEEECBCCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHH
T ss_pred             CCcccCCCCceeEEEEEEEEeCCCcEEEEEEEEeccEEEEEeCCEEEECCeEEEEeccCcCccCcccCcCCCHHHHHHHH
Confidence            69999999999999999998778999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCcEEEccCCCChhHHHHHHhhcCCeEEeeccccccCcccc--------------------cCCCCCCCCHHHH
Q 007038           81 VLMKQNNINAVRNSHYPQHPRWYELCDLFGLYMIDEANIETHGFYFS--------------------EHLKHPTMEPSWA  140 (620)
Q Consensus        81 ~lmK~~g~NavR~~h~p~~~~~~dlcDe~Gi~V~~E~~~~~hg~~~~--------------------~~~~~~~~~~~~~  140 (620)
                      ++||++|+|+||+||||++++||++|||+|||||+|+++++||+..+                    .....+.++|+|.
T Consensus       382 ~lmK~~g~NaVRtsHyp~~~~fydlCDe~Gi~V~dE~~~e~hG~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~w~  461 (1032)
T 3oba_A          382 ILMKKFNINAVRNSHYPNHPKVYDLFDKLGFWVIDEADLETHGVQEPFNRHTNLEAEYPDTKNKLYDVNAHYLSDNPEYE  461 (1032)
T ss_dssp             HHHHHTTCCEEECTTSCCCTTHHHHHHHHTCEEEEECSCBCGGGGHHHHHHTTCCCCCTTTTHHHHTTTGGGTTTCGGGH
T ss_pred             HHHHHcCCcEEEecCCCChHHHHHHHHHCCCEEEEccccccCCccccccccccccccccccccccccccccccCCCHHHH
Confidence            99999999999999999999999999999999999999999996410                    0112346889999


Q ss_pred             HHHHHHHHHHHHHhCCCceEEEEecCCCCCCCccHHHHHHHHHHhCCCCeEecCCCCCCCCCcceecCCCCcHHHHHHHH
Q 007038          141 AAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIA  220 (620)
Q Consensus       141 ~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g~~~~~~~~~ik~~DptRpv~~~~~~~~~~~~Di~~~~Y~~~~~~~~~~  220 (620)
                      +++++++++||+|+||||||||||+|||++.++++++|++++|++||||||+|++.. ....+||+|.||++.+.+++++
T Consensus       462 ~~~~~~~~~mV~RdrNHPSIi~WslgNE~~~g~~~~~~~~~~k~~DptRpv~~e~~~-~~~~~Di~s~mY~~~~~i~~~~  540 (1032)
T 3oba_A          462 VAYLDRASQLVLRDVNHPSIIIWSLGNEACYGRNHKAMYKLIKQLDPTRLVHYEGDL-NALSADIFSFMYPTFEIMERWR  540 (1032)
T ss_dssp             HHHHHHHHHHHHHHTTCTTEEEEECCBSCCCCHHHHHHHHHHHHHCTTSEEECTTCT-TCTTCSSEEEESCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEECccCCccchhHHHHHHHHHHhCCCCcEEeccCc-CcccceeeeccCCCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999875 3678999999999999999887


Q ss_pred             hCCC-----CCCcEEEeccCCccCCCCccHHHHHHHHHhcCCeeeeeeecccccceeeee-----CCCcEEEeecCCCCC
Q 007038          221 KDPT-----ETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLREL-----ADGTKHWAYGGDFGD  290 (620)
Q Consensus       221 ~~~~-----~~kP~i~~Eygh~~gns~g~~~~y~~~~~~~~~~~G~fiW~~~D~~~~~~~-----~~g~~~~~yggd~~~  290 (620)
                      +...     .+||+|+|||+|+||||+|++++||++++++|.++|||||+|+|||+..++     ++|+.+|+||||||+
T Consensus       541 ~~~~~~~~~~~kP~i~~Ey~Hamgn~~g~l~~yw~~~~~~p~~~GgfiWdw~Dq~~~~~~~~~~~~~G~~~~~YGGDfgd  620 (1032)
T 3oba_A          541 KNHTDENGKFEKPLILCEYGHAMGNGPGSLKEYQELFYKEKFYQGGFIWEWANHGIEFEDVSTADGKLHKAYAYGGDFKE  620 (1032)
T ss_dssp             HHHBCTTSCBSSCEEEEEESCCCSSCCCCHHHHHHHHHHCTTEEEEEESCSBCCCEEEEEECTTTSSEEEEEECTTTTCC
T ss_pred             hhCcccccccCCCEEEEeccccccCCCCCHHHHHHHHHhCCCeeEEEEEecccccccccccccccCCCcEeEEECCCCCC
Confidence            5432     279999999999999999999999999999999999999999999999988     899999999999999


Q ss_pred             CCCCcccccCceecCCCCCcccHHHHHHhcccEEEEEcCCeE--------------------------------------
Q 007038          291 TPNDLNFCLNGLLWPDRTPHPALHEVKYVYQAIKVSLKKGTL--------------------------------------  332 (620)
Q Consensus       291 ~~~d~~f~~~Glv~~dR~pk~~~~e~k~~~~~~~~~~~~~~~--------------------------------------  332 (620)
                      .|+|+|||+||||++||+|+|+++|+|++||||+|+..+++|                                      
T Consensus       621 ~p~d~nF~~dGlv~~DR~p~p~~~e~k~v~qpv~~~~~~~~~~i~N~~~F~~l~~~~~~~g~~~g~~~~~~~~p~~~~~~  700 (1032)
T 3oba_A          621 EVHDGVFIMDGLCNSEHNPTPGLVEYKKVIEPVHIKIAHGSVTITNKHDFITTDHLLFIDKDTGKTIDVPSLKPEESVTI  700 (1032)
T ss_dssp             SSCCGGGGCCCSBCTTSCBCHHHHHHHHHTCSEEEEEETTEEEEEECCSSCCSTTEEEEETTTCCEECCCCCCTTCEEEE
T ss_pred             CCCCCCcccCeeECCCCCcChhHHHHHHhcCcEEEEeeCCEEEEEECccCCCccccEEeCCeeeeEEeccccCCCceEEE
Confidence            999999999999999999999999999999999986544322                                      


Q ss_pred             -----------------------------------------------------------------------------EEC
Q 007038          333 -----------------------------------------------------------------------------KVE  335 (620)
Q Consensus       333 -----------------------------------------------------------------------------~~~  335 (620)
                                                                                                   .++
T Consensus       701 ~l~~e~~l~~l~~~t~w~~~G~~va~~Q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~f~k~~G~l~s~~~~  780 (1032)
T 3oba_A          701 PSDTTYVVAVLKDDAGVLKAGHEIAWGQAELPLKVPDFVTETAEKAAKINDGKRYVSVESSGLHFILDKLLGKIESLKVK  780 (1032)
T ss_dssp             ECCCSEEEEEESSCBBTBCTTCEEEEEECCCCCCCCCCCCCCSCCCCEEEECSSEEEEEETTEEEEEETTTTEEEEEEET
T ss_pred             EECCEEEEEEECcCCccccCCCEEEEEEEEecCccccccccccCCCcEEEecCCEEEEEECCEEEEEECCcceEEEEEEC
Confidence                                                                                         458


Q ss_pred             CEeeee--cCCCCCeeeecCCCCCCCCCcccchhhHhcCccceeEEEEEEEEEEeCCce-EEEEEEEEeccccccchhhh
Q 007038          336 GVSVMK--RGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYF-VKIRVVYDGTPRVDMSSLTK  412 (620)
Q Consensus       336 g~~ll~--~~~~~~~wRaptdND~~~~~~~~~~~W~~ag~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~  412 (620)
                      |+++|.  +||+|||||||||||+|.+    ...|+.||+++++.++.++++.+..++. +.|++++.+.+.        
T Consensus       781 g~~~l~~~~~~~~~fwRAptDND~~~~----~~~W~~ag~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~--------  848 (1032)
T 3oba_A          781 GKEISSKFEGSSITFWRPPTNNDEPRD----FKNWKKYNIDLMKQNIHGVSVEKGSNGSLAVVTVNSRISPV--------  848 (1032)
T ss_dssp             TEEEEECCSSCSEECCCCCCTTTTTTH----HHHHHHTTGGGEEEEEEEEEEEECCSSCSEEEEEEEEEEET--------
T ss_pred             CEEEeccCCCCeeEeecCCcccccCcc----hhhHhhcCcccceeEEEEEEEEEecCCCeEEEEEEEEecCc--------
Confidence            999999  8999999999999999864    4679999999999999998887652333 578888776432        


Q ss_pred             hhhccceeEEEEEEEEecCceEEEEEEEeeCCCC-CCC-cceeeEEEEecCCCCceEEEeCCCCCCccchhcCccceeec
Q 007038          413 LEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSD-LPP-LPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYE  490 (620)
Q Consensus       413 ~~~~~~~~~~~~~Y~i~~~G~i~v~~~~~~~~~~-~p~-lpRiG~~~~lp~~~~~v~wyGrGP~EnY~DRk~~a~~G~y~  490 (620)
                        ...+.+.++++|+|+ +|.|.|++++.+. +. +|. ||||||+|.||++|++|+||||||+|||+|||+||++|+|+
T Consensus       849 --~~~~~~~~~~~y~i~-~G~i~v~~~~~~~-~~~~p~~lpr~G~~~~lp~~~~~v~wyGrGP~EnY~DR~~~~~~G~y~  924 (1032)
T 3oba_A          849 --VFYYGFETVQKYTIF-ANKINLNTSMKLT-GEYQPPDFPRVGYEFWLGDSYESFEWLGRGPGESYPDKKESQRFGLYD  924 (1032)
T ss_dssp             --TCSCEEEEEEEEEEC-SSEEEEEEEEEEE-SSSCCSBCSEEEEEEEECTTEEEEEEEEECSSCCBTTBCTTSCEEEEE
T ss_pred             --ccccceEEEEEEEEe-CCEEEEEEEEEEC-CCcCCcccceeEEEEEcCCccceeEEECcCCCcCCcchhcccceeeEe
Confidence              123567889999999 9999999999998 55 898 99999999999999999999999999999999999999999


Q ss_pred             cccccccccccCccCCCCccceeEEEEeeCCCceEEEEecCC--CCCeeEEEecCCHHHHhccCCCCCCCCCCeEEEEEc
Q 007038          491 QIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSS--SPPMQLNASYYTTTELDRATHNEQLVKEDKIEVHLD  568 (620)
Q Consensus       491 ~tv~~~~~~Yv~PQE~Gnr~dvrw~~l~~~~g~gl~i~~~~~--~~~~~fsa~~yt~~~l~~a~H~~eL~~~~~~~l~iD  568 (620)
                      ++ ++|++||++|||||||+||||++|++. |.||+|+   +  +++|+|||+  |+++|++|+|++||++++.|+||||
T Consensus       925 ~~-~~~~~~Y~~PQE~Gnr~dvrw~~l~~~-g~gl~~~---~~~~~~~~fsa~--t~~~l~~a~H~~eL~~~~~~~l~lD  997 (1032)
T 3oba_A          925 SK-DVEEFVYDYPQENGNHTDTHFLNIKFE-GAGKLSI---FQKEKPFNFKIS--DEYGVDEAAHACDVKRYGRHYLRLD  997 (1032)
T ss_dssp             GG-GCCCCCCSSCCSCCCEEEESEEEEEET-TTEEEEE---EESSSCEEEEEE--EEECTTTCSSGGGCEEEEEEEEEEE
T ss_pred             CC-cccCCCcCCccCCCCccccEEEEEecC-CceEEEE---EcCCCCEEEEeC--CHHHHHhCcCHhHCCCCCCEEEEEc
Confidence            99 999999999999999999999999998 8999998   5  679999999  9999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCccccCccEEEEEEEEe
Q 007038          569 HKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSP  603 (620)
Q Consensus       569 ~~q~GvGg~~ScGp~~~~~Y~l~~~~~~~~f~i~p  603 (620)
                      ++||||| +|||||.||++|+|++++|+|+|+|++
T Consensus       998 ~~q~GvG-~~S~g~~~~~~y~l~~~~~~~~f~l~~ 1031 (1032)
T 3oba_A          998 HAIHGVG-SEACGPAVLDQYRLKAQDFNFEFDLAF 1031 (1032)
T ss_dssp             EEECCCC-CGGGSCCCCGGGSCBSCCEEEEEEEEE
T ss_pred             ccccCCC-CCccCCCCCHhHCccCCcEEEEEEEEe
Confidence            9999995 679999999999999999999999975
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 Back     alignment and structure
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* Back     alignment and structure
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* Back     alignment and structure
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* Back     alignment and structure
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* Back     alignment and structure
>4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B Back     alignment and structure
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 620
d1yq2a5297 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 { 1e-79
d1jz8a5292 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 { 1e-77
d1jz8a4293 b.30.5.1 (A:731-1023) beta-Galactosidase, domain 5 3e-73
d1yq2a4302 b.30.5.1 (A:722-1023) beta-Galactosidase, domain 5 3e-70
d1bhga3304 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 { 4e-45
d1qnra_344 c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T 4e-43
d1uuqa_410 c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta 8e-34
d2vzsa5339 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato 1e-31
d1bqca_302 c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca 5e-29
d2je8a5348 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, 7e-29
d2c0ha1350 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue 9e-28
d1tvna1293 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter 1e-25
d1wkya2297 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA 2e-25
d1rh9a1370 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper 1e-24
d1tg7a5354 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter 6e-17
d1egza_291 c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant 1e-11
d1ecea_358 c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul 1e-10
d7a3ha_300 c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh 2e-08
d1jz8a1114 b.1.4.1 (A:220-333) beta-Galactosidase, domains 2 3e-08
d1kwga2393 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t 1e-06
d1bhga1103 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Hom 0.001
d1yq2a293 b.1.4.1 (A:220-312) beta-Galactosidase, domains 2 0.002
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 297 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: beta-Galactosidase, domain 3
species: Arthrobacter sp. c2-2 [TaxId: 192168]

 Score =  252 bits (643), Expect = 1e-79
 Identities = 125/292 (42%), Positives = 172/292 (58%), Gaps = 16/292 (5%)

Query: 44  KQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWY 103
            Q LVNG  VV  GVNRHE HP  G+   E+   +DL LMK+ N+NA+R SHYP HPR  
Sbjct: 6   DQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLL 65

Query: 104 ELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICW 163
           +L D  G ++I E ++ETHGF     +++P+  P+W  A++DR+   VERDKNH SI+ W
Sbjct: 66  DLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMW 125

Query: 164 SLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTPSTDIVCPMYMRVWDIVMIAKDP 223
           SLGNE+G G N +A A W   +D SR +HYEG       TD+   MY  + +   I ++ 
Sbjct: 126 SLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDY-TGAYTDVYSRMYSSIPETDSIGRND 184

Query: 224 ---------------TETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVD 268
                            T+P ILCEY HAMGN  G + +Y   +D    L GGF+W+W D
Sbjct: 185 SHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVWEWRD 244

Query: 269 QGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKYVY 320
            G+    A+G + +AYGGDFG+  +D NF ++G++  D TP P L+E K + 
Sbjct: 245 HGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIV 296
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 292 Back     information, alignment and structure
>d1jz8a4 b.30.5.1 (A:731-1023) beta-Galactosidase, domain 5 {Escherichia coli [TaxId: 562]} Length = 293 Back     information, alignment and structure
>d1yq2a4 b.30.5.1 (A:722-1023) beta-Galactosidase, domain 5 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 302 Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 348 Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 Back     information, alignment and structure
>d1jz8a1 b.1.4.1 (A:220-333) beta-Galactosidase, domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 114 Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 Back     information, alignment and structure
>d1bhga1 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1yq2a2 b.1.4.1 (A:220-312) beta-Galactosidase, domains 2 and 4 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 93 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query620
d1jz8a4293 beta-Galactosidase, domain 5 {Escherichia coli [Ta 100.0
d1yq2a4302 beta-Galactosidase, domain 5 {Arthrobacter sp. c2- 100.0
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 100.0
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 100.0
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 100.0
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 100.0
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 100.0
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 99.96
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 99.94
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 99.94
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 99.94
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 99.93
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 99.93
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 99.92
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 99.91
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 99.88
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 99.83
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 99.71
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 99.53
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 99.49
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 99.29
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 99.17
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 99.16
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.1
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.98
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.94
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 98.92
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 98.85
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 98.8
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 98.69
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 98.69
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.67
d1yq2a293 beta-Galactosidase, domains 2 and 4 {Arthrobacter 98.64
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 98.59
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.57
d1bhga1103 beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 98.52
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 98.51
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 98.3
d1i1wa_303 Xylanase A, catalytic core {Thermoascus aurantiacu 98.26
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 98.15
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 98.15
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 98.12
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 98.06
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 97.97
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 97.95
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 97.91
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 97.9
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 97.88
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 97.83
d1w32a_346 Xylanase A, catalytic core {Pseudomonas fluorescen 97.77
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 97.74
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 97.67
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 97.66
d1ur1a_350 Xylanase {Cellvibrio mixtus [TaxId: 39650]} 97.63
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 97.62
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 97.55
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 96.84
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 95.13
d1cbga_490 Plant beta-glucosidase (myrosinase) {Creeping whit 94.24
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 93.93
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 93.71
d2vzsa1110 Exochitosanase CsxA, domains 2, 4 and 5 {Amycolato 92.99
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 92.39
d1vema2417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 92.24
>d1jz8a4 b.30.5.1 (A:731-1023) beta-Galactosidase, domain 5 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: beta-Galactosidase, domain 5
domain: beta-Galactosidase, domain 5
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3e-72  Score=576.77  Aligned_cols=248  Identities=30%  Similarity=0.502  Sum_probs=225.7

Q ss_pred             EECCEeeeecCCCCCeeeecCCCCCCCCCcc------cchhhHhcCccceeEEEEEEEEEEeCCceEEEEEEEEeccccc
Q 007038          333 KVEGVSVMKRGIFPCFWRAPTDNDKGGGESS------YYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVD  406 (620)
Q Consensus       333 ~~~g~~ll~~~~~~~~wRaptdND~~~~~~~------~~~~W~~ag~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  406 (620)
                      .++|+++|.+||.|||||||||||+|.+...      +...|++||++++..++.++.+....+.+ .|++.+.+.+   
T Consensus        39 ~~~g~~ll~~~~~~~fWRApTDND~g~~~~~~~~~~~~~~~W~~ag~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~---  114 (293)
T d1jz8a4          39 WIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAV-LITTAHAWQH---  114 (293)
T ss_dssp             EETTEECEEEEEEEECCCCCCHHHHTTCBTTBCCTTSHHHHHHHHTTTTCEEEEEEEEEEECSSEE-EEEEEEEEEE---
T ss_pred             EECCEEhhhcCCccceecCCCccccCcccccccccchhhHHHHHcCccccEEEEEEEEEEEcCCcE-EEEEEEEeec---
Confidence            7899999999999999999999999876532      34679999999999999999887665554 6676666522   


Q ss_pred             cchhhhhhhccceeEEEEEEEEecCceEEEEEEEeeCCCCCCCcceeeEEEEecCCCCceEEEeCCCCCCccchhcCccc
Q 007038          407 MSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHV  486 (620)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~Y~i~~~G~i~v~~~~~~~~~~~p~lpRiG~~~~lp~~~~~v~wyGrGP~EnY~DRk~~a~~  486 (620)
                              .....+.++++|+|+++|.|.|++++.+. +.+|.||||||+|.||++|++|+||||||+|||+|||+|+++
T Consensus       115 --------~~~~~~~~~~~y~i~~~G~i~v~~~~~~~-~~~p~lpRiG~~~~Lp~~~~~v~wyGrGP~EnY~DRk~sa~i  185 (293)
T d1jz8a4         115 --------QGKTLFISRKTYRIDGSGQMAITVDVEVA-SDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACF  185 (293)
T ss_dssp             --------TTEEEEEEEEEEEEETTSCEEEEEEEEEC-TTSCCCSEEEEEEEESCCCSEEEEEEEESSCCBTTBCTTCEE
T ss_pred             --------CCceeEEEEEEEEECCCCceeEEEecccc-cCCCCCccEEEEEEcCcchhhCEEEecCCCCCCCCcccccee
Confidence                    23456777889999999999999999998 889999999999999999999999999999999999999999


Q ss_pred             eeeccccccccccccCccCCCCccceeEEEEeeCCCceEEEEecCCCCCeeEEEecCCHHHHhccCCCCCCCCCCeEEEE
Q 007038          487 DVYEQIVGDMHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNEQLVKEDKIEVH  566 (620)
Q Consensus       487 G~y~~tv~~~~~~Yv~PQE~Gnr~dvrw~~l~~~~g~gl~i~~~~~~~~~~fsa~~yt~~~l~~a~H~~eL~~~~~~~l~  566 (620)
                      |+|+++|++||+||+||||||||+||||++|++..|.|          +|+|||+|||+++|++|+|++||++++.|+||
T Consensus       186 G~y~~~V~~~~~pYv~PQE~Gnr~dvrw~~l~~~~g~g----------~~~fs~~~ys~~~L~~a~H~~eL~~~~~~~l~  255 (293)
T d1jz8a4         186 DRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRG----------DFQFNISRYSQQQLMETSHRHLLHAEEGTWLN  255 (293)
T ss_dssp             EEEEEEGGGGSCCCSSCCSCCCEEEEEEEEETTEEEEE----------EEEEEEESSCHHHHHHCSSGGGCCCCSSEEEE
T ss_pred             eEEcCcHHHhCCcccccccCCCcccceEEEecCccccc----------cceeecccCChHHhhcCCCcccCCCCCCEEEE
Confidence            99999999999999999999999999999999876643          69999999999999999999999999999999


Q ss_pred             EccccccCCCCCCCCCCCCCCccccCccEEEEEEEEe
Q 007038          567 LDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSP  603 (620)
Q Consensus       567 iD~~q~GvGg~~ScGp~~~~~Y~l~~~~~~~~f~i~p  603 (620)
                      ||++||||||+|||||.||++|+|++++|+|+|+|+-
T Consensus       256 iD~~q~GvGG~~ScGp~~~~~Y~l~~~~~~f~f~~~~  292 (293)
T d1jz8a4         256 IDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQ  292 (293)
T ss_dssp             EEEEECCCCCSCSSSCCCCGGGSCCSSEEEEEEEEEE
T ss_pred             EehHhcCCCcCCCCCCCCCcccCcCCCcEEEEEEEEe
Confidence            9999999999999999999999999999999999874
>d1yq2a4 b.30.5.1 (A:722-1023) beta-Galactosidase, domain 5 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1yq2a2 b.1.4.1 (A:220-312) beta-Galactosidase, domains 2 and 4 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1bhga1 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d2vzsa1 b.1.4.1 (A:226-335) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure