Citrus Sinensis ID: 007041

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
MSMFGRDPWGGPLEINAADSATDDDRSRNLQDFDRAALSRPLDETQQSWLLGPTEKKKKKYVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTRGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEKSRTTIDKNTIFSAVPPMFPTPPPPPAPWKP
cccccccccccccccccccccccccccccHHHHHHHHccccccHHHHcccccccccccccEEECccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHcccccccccccccccEEccccccccHHHHHHHHHHHHHHHcHHccccccccccccccccHHHHHHHHHHHHHHHcccccccccCEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
********WGGPLE******************F***A******ETQQSWLLGPTEKKKKKYVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTRGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGE*****I****I********************
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MSMFGRDPWGGPLEINAADSATDDDRSRNLQDFDRAALSRPLDETQQSWLLGPTEKKKKKYVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTRGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEKSRTTIDKNTIFSAVPPMFPTPPPPPAPWKP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Endoglucanase 9 Involved in cell wall assembly during cell elongation.confidentP0C1U4
Endoglucanase 25 Required for cellulose microfibrils formation. Involved in cell wall assembly during cell elongation and cell plate maturation in cytokinesis. Required for secondary cell wall formation in the developing xylem. May cycle through different intracellular compartments, including plasma membrane.confidentQ38890
Endoglucanase 21 probableQ9STW8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.4Cellulase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YIK, chain A
Confidence level:very confident
Coverage over the Query: 109-460,474-522,535-590
View the alignment between query and template
View the model in PyMOL
Template: 1UT9, chain A
Confidence level:very confident
Coverage over the Query: 40-82,97-458,474-589
View the alignment between query and template
View the model in PyMOL