Citrus Sinensis ID: 007069
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 619 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMX4 | 613 | Probable inactive purple | yes | no | 0.988 | 0.998 | 0.773 | 0.0 | |
| Q5MAU8 | 611 | Probable inactive purple | no | no | 0.974 | 0.986 | 0.687 | 0.0 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.953 | 0.959 | 0.663 | 0.0 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.563 | 0.948 | 0.696 | 1e-151 | |
| Q9LMG7 | 656 | Probable inactive purple | no | no | 0.802 | 0.757 | 0.300 | 5e-55 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.809 | 0.769 | 0.307 | 4e-53 | |
| Q8BX37 | 438 | Iron/zinc purple acid pho | no | no | 0.584 | 0.826 | 0.280 | 3e-26 | |
| Q6ZNF0 | 438 | Iron/zinc purple acid pho | yes | no | 0.510 | 0.721 | 0.279 | 7e-26 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.552 | 0.782 | 0.253 | 1e-22 | |
| A5D6U8 | 443 | Iron/zinc purple acid pho | yes | no | 0.581 | 0.812 | 0.271 | 2e-22 |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/613 (77%), Positives = 525/613 (85%), Gaps = 1/613 (0%)
Query: 8 MRE-LRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQ 66
MRE L I ++ VLG SH PLS IA+ K T+ LN+ AYVKASP V+G GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 67 NSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSP 126
+SE V V+YSSP PS DDWI VFSP++F+ASTC +N V PP LCSAP+K+QYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 127 QYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKT 186
+Y TG GSLKL LINQRSDFS ALFSGGLL PKLVA+SNK+AF NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 187 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246
W+EMTVTWTSGYG+N AE V+WG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDE 306
IHT+FLKELWPN+ YTY+VGHRL N IWS EYQFK+SP+PGQNS+Q+VVIFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 307 ADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 366
DGS+EYNDFQ ASLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 367 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 426
VPYMIASGNHER WP +GSFY DSGGECGV AETMFYVPA+NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 427 VADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 486
VADTEHDWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 546
RESLQKLWQKYKVDIAIYGH HNYERTCP+YQ++CT+ EK+ YK LNGTIH+VAGGGGA
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGA 540
Query: 547 GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 606
GLAEF+ LQ WSL+RDYDYGF+KLTA DHSNLLFEYKKSSDG+V+DSF IS+DYRDILA
Sbjct: 541 GLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTISKDYRDILA 600
Query: 607 CTVGSCPSTTLAS 619
C V SCP+TTLAS
Sbjct: 601 CAVDSCPATTLAS 613
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/608 (68%), Positives = 485/608 (79%), Gaps = 5/608 (0%)
Query: 16 FGILLVLGTFQVASSH----GGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWV 71
F ++L+ QV+SSH G LS+I I A + +A++ SP V+G +GQ++EWV
Sbjct: 5 FLLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWV 64
Query: 72 TVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGT 131
V S+P PS DDW+ VFSP+ F +S+C+ + P +CSAP+KY YA SSP Y T
Sbjct: 65 NVVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKT 123
Query: 132 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMT 191
G LK MLINQR+DFS ALF+GGL P LV+VSN ++F NP APVYPRLA GK W+EMT
Sbjct: 124 GNAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMT 183
Query: 192 VTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251
VTWTSGY I EA FV+W RKG SPAGTLTF R SMCGAPARTVGWRDPG+IHT+
Sbjct: 184 VTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTAS 243
Query: 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSN 311
LK+LWPN YTY++GH L N + +WS + FK+SPYPGQ+SLQRV+IFGDMGK E DGSN
Sbjct: 244 LKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSN 303
Query: 312 EYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371
EYND+Q SLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+
Sbjct: 304 EYNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMV 363
Query: 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE 431
ASGNHERDWP +GSFYG KDSGGECGV AETMF PAEN+AKFWYS DYGMFRFCVADTE
Sbjct: 364 ASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTE 423
Query: 432 HDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQ 491
HDWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS+ +Y +GSF EPMGRESLQ
Sbjct: 424 HDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQ 483
Query: 492 KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEF 551
KLWQKYKVDIA YGHVHNYERTCPIYQN C + EK++Y G GTIHVV GG G+ L+ F
Sbjct: 484 KLWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSF 543
Query: 552 TPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGS 611
+ L+ WS++RDYDYGFVKLTAFDHS+LLFEYKKSS+G V+DSF I R+YRD+LAC S
Sbjct: 544 SSLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDS 603
Query: 612 CPSTTLAS 619
C TTLAS
Sbjct: 604 CEPTTLAS 611
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/592 (66%), Positives = 465/592 (78%), Gaps = 2/592 (0%)
Query: 28 ASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIA 87
A+ G L++I + + + AL+ + + ASP V+G +G+++EWV + S+P P+ DDWI
Sbjct: 24 ANGRGDQALAQINVYETSLALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIG 83
Query: 88 VFSPSNFSASTC-SAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSD 146
VFSP+ F + C P +CS+PIKY Y N S P Y +G +LK +INQR+D
Sbjct: 84 VFSPAKFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPDYMKSGNVTLKFQIINQRAD 142
Query: 147 FSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAF 206
S ALFS G+ +P L+ VSN +AF NP APVYPRLA GK W+EMTVTWTSGY I+EA F
Sbjct: 143 VSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNWDEMTVTWTSGYNIDEAVPF 202
Query: 207 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVG 266
++W KG SPAGTLTF+R SMCG PAR VGWRDPG+ HTSFLKELWPN Y Y++G
Sbjct: 203 IEWSAKGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLG 262
Query: 267 HRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQ 326
H L N + IWS Y F +SPYPGQ+S QRV+IFGDMGK E DGSNEYND+Q SLNTT Q
Sbjct: 263 HDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQ 322
Query: 327 LIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSF 386
+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSF
Sbjct: 323 VIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSF 382
Query: 387 YGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEH 446
Y DSGGECGV AETMFY PAENRAKFWY TDYGMFRFCVAD+EHDWREGTEQYKFIE+
Sbjct: 383 YAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIEN 442
Query: 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 506
CLA+VDR+ QPWLIF+AHRVLGYS+ +Y +G+F EPMGRESLQKLWQKYKVD+A YGH
Sbjct: 443 CLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGH 502
Query: 507 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDY 566
VHNYERTCPIY++ C N +K++Y GT GTIHVV GG G+ L+ F+ L WSL RDYD+
Sbjct: 503 VHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDF 562
Query: 567 GFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLA 618
GFVKLTA DHS+LLFEYKKSS G+VYDSF ISRDYRD+LACT SC TT A
Sbjct: 563 GFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 614
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 243/349 (69%), Positives = 287/349 (82%)
Query: 271 NSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD 330
+ + +W+ Y F+A P PGQNSLQR+++FGDMGK E DGSNE+ ++Q SLNTT +LI+D
Sbjct: 20 DGSVVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIED 79
Query: 331 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNK 390
L N DIVFHIGD+ YANGY+SQWDQFTAQ+ PI++ PYM+ASGNHERDWP TG F+ K
Sbjct: 80 LDNYDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVK 139
Query: 391 DSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450
DSGGECGV AETM+Y PAENRA FWY DYGMFRFCV D+EHDWREGT QYKFIE CL++
Sbjct: 140 DSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLST 199
Query: 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 510
VDR+ QPWLIF AHRVLGYSS +YA GSF EP GRESLQKLWQ+Y+VDIA +GHVHNY
Sbjct: 200 VDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 259
Query: 511 ERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVK 570
ERTCP+YQ+ C N +K +Y GT+NGTI VVAGGGG+ L+ +T WS++RD+DYGF K
Sbjct: 260 ERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTK 319
Query: 571 LTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLAS 619
LTAF+HS+LLFEY KSSDGKVYDSF I RDYRD+L+C SC TTLAS
Sbjct: 320 LTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 186/619 (30%), Positives = 290/619 (46%), Gaps = 122/619 (19%)
Query: 40 AIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTC 99
A KAT +++ NA ++ +VV +W V+ +PS DW+ ++SP
Sbjct: 20 ADSKATISISPNALNRSGDSVV------IQWSGVD----SPSDLDWLGLYSP-------- 61
Query: 100 SAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLL 157
E+P+ I Y++ N SS G G S+ L L N RS+++ +F S +
Sbjct: 62 -PESPN-------DHFIGYKFLNESSTWKDGFG--SISLPLTNLRSNYTFRIFRWSESEI 111
Query: 158 KPK--------------LVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE 202
PK L+A S ++ F + P L+ N M V + +G G
Sbjct: 112 DPKHKDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG--- 168
Query: 203 AEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAM 260
E FV++G +S A + ++R MC +PA T+GWRDPG+I + +K L
Sbjct: 169 EERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVR 228
Query: 261 YTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDF---Q 317
Y Y+VG + + WS + + A + ++ +FGDMG + Y F Q
Sbjct: 229 YYYQVG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMG-----CATPYTTFIRTQ 277
Query: 318 YASLNTTRQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373
S++T + +++D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY +
Sbjct: 278 DESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCI 337
Query: 374 GNHERDWPG-------TGSFYGNKDSGGECGVLAETMFYVPAENRA----------KFWY 416
GNHE D+ S YGN D GGECGV F +P + +Y
Sbjct: 338 GNHEYDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYY 396
Query: 417 STDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA 476
S D G F TE ++ +G QY+FI+ L SVDR+K P+++ HR + Y
Sbjct: 397 SYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPM-------YT 449
Query: 477 VDGSFAEPMGR----ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 532
+ M R E L+ L+ K V +A++GHVH YER CPI N C + ++G
Sbjct: 450 TSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTCGTQ----WQGN 505
Query: 533 LNGTIHVVAGGGGAGLAEFTPL--------------QTTWSLYRDYDYGFVKLTAFDHSN 578
+H+V G G ++ P+ Q S+YR ++G+ +L A +
Sbjct: 506 ---PVHLVIGMAG---QDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVA-NKEK 558
Query: 579 LLFEYKKSSDGKVYDSFRI 597
L + + DG+V+D+ +
Sbjct: 559 LTVSFVGNHDGEVHDTVEM 577
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 275/601 (45%), Gaps = 100/601 (16%)
Query: 52 AYVKASPAVVGLKGQNSEWVTVEYSS-PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPL 110
A + SP + G + V +++S +PS DW+ ++SP P
Sbjct: 22 ATISISPQTLNRSG---DIVVIKWSGVESPSDLDWLGIYSP----------------PDS 62
Query: 111 LCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLLKPK-------- 160
I Y++ + SP ++ +G GS+ L L N RS+++ +F + + PK
Sbjct: 63 PHDHFIGYKFLS-DSPTWQ-SGSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNP 120
Query: 161 ------LVAVSNKIAFT-NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKG 213
L+ SN++ F N P L+ NEM V + +G G E EA +
Sbjct: 121 LPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDG-EEREARYGEVKDK 179
Query: 214 GDRTHSPAGTLTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNS 272
D G + ++ MC APA TVGWRDPG+ + +K L Y Y+VG L
Sbjct: 180 LDNIAVARG-VRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG- 237
Query: 273 TYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDF---QYASLNTTRQLIQ 329
WS + F + + +L +FGDMG Y F + SL+T + +++
Sbjct: 238 ---WSEIHSFVSRNEGSEETL--AFMFGDMG-----CYTPYTTFIRGEEESLSTVKWILR 287
Query: 330 DLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT- 383
D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNHE DWP
Sbjct: 288 DIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQP 347
Query: 384 -----GSFYGNKDSGGECGVLAETMFYVPAENRA-----------KFWYSTDYGMFRFCV 427
++ KDSGGECGV F +P + +YS D G F
Sbjct: 348 WKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVY 407
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
TE D+ +G +QY F++ L SV+R K P+++ HR + +S D + E M
Sbjct: 408 ISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTSRKIR--DAAIREKM-I 464
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 547
E L+ L K V +A++GHVH YER C I N C + ++G +H+V G G
Sbjct: 465 EHLEPLLVKNNVTVALWGHVHRYERFCAISNNTCGER----WQGN---PVHLVIGMAGKD 517
Query: 548 LA---------EFTPL--QTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFR 596
E P+ Q S+YR ++G+++L A + L Y + DG+V+D
Sbjct: 518 SQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVA-NKERLTLSYVGNHDGEVHDVVE 576
Query: 597 I 597
I
Sbjct: 577 I 577
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8BX37|PAPL_MOUSE Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2 | Back alignment and function description |
|---|
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 183/432 (42%), Gaps = 70/432 (16%)
Query: 190 MTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249
MTVTWT+ A + VQ+G + +G L F A R YIH
Sbjct: 46 MTVTWTT---WAPARSEVQFGSQ-------LSGPLPFRAHGTARAFVDGGVLRRKLYIHR 95
Query: 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADG 309
L++L P A Y Y+ G S+ WS ++F A G + R+ +FGDMG D
Sbjct: 96 VTLRKLQPGAQYVYRCG-----SSQGWSRRFRFTALKN-GVHWSPRLAVFGDMGADNP-- 147
Query: 310 SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS 365
+L R+ Q D V H+GD Y N + D+F IEP+A+
Sbjct: 148 ---------KALPRLRRDTQQ-GMFDAVLHVGDFAYNMDQDNARVG--DRFMRLIEPVAA 195
Query: 366 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRF 425
++PYM GNHE+ + +F K F +P +N WYS D G
Sbjct: 196 SLPYMTCPGNHEQRY----NFSNYK-----------ARFSMPGDNEG-LWYSWDLGPAHI 239
Query: 426 CVADTE-----HDWREGTE-QYKFIEHCL--ASVDRQKQPWLIFLAHRVLGYSSGIFYAV 477
TE H R E Q++++E+ L A+ +R +PW+I + HR + S+
Sbjct: 240 ISFSTEVYFFLHYGRHLIEKQFRWLENDLQKANKNRVARPWIITMGHRPMYCSNADL--D 297
Query: 478 DGSFAEPMGRESL-------QKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 530
D + E R+ L + L+ KY VD+ + H H+YER PIY N
Sbjct: 298 DCTRHESRVRKGLHGKLFGLEDLFHKYGVDLEFWAHEHSYERLWPIYNYQVFNGSLESPY 357
Query: 531 GTLNGTIHVVAGGGGAG--LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL-LFEYKKSS 587
G +H++ G G L F WS R +YG+ ++ + +++ + +
Sbjct: 358 TNPRGPVHIITGSAGCEELLTPFVRKPRPWSAVRVKEYGYTRMHILNGTHMHIQQVSDDQ 417
Query: 588 DGKVYDSFRISR 599
DGK+ D + R
Sbjct: 418 DGKIVDDVWVVR 429
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6ZNF0|PAPL_HUMAN Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2 | Back alignment and function description |
|---|
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 161/376 (42%), Gaps = 60/376 (15%)
Query: 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKD 305
YIH L++L P Y Y+ G S WS ++F+A G + R+ +FGD+G D
Sbjct: 92 YIHRVTLRKLLPGVQYVYRCG-----SAQGWSRRFRFRALKN-GAHWSPRLAVFGDLGAD 145
Query: 306 EADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICY----ANGYISQWDQFTAQIE 361
A R Q + D V H+GD Y N + D+F IE
Sbjct: 146 NPK----------AVPRLRRDTQQGM--YDAVLHVGDFAYNLDQDNARVG--DRFMRLIE 191
Query: 362 PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG 421
P+A+++PYM GNHE + +F K F +P +N WYS D G
Sbjct: 192 PVAASLPYMTCPGNHEERY----NFSNYK-----------ARFSMPGDNEG-LWYSWDLG 235
Query: 422 MFRFCVADTE-----HDWREGTE-QYKFIEHCL--ASVDRQKQPWLIFLAHRVLGYSSGI 473
TE H R + Q++++E L A+ +R +PW+I + HR + S+
Sbjct: 236 PAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNAD 295
Query: 474 FYAVDGSFAEPMGRESLQ-------KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEK 526
D + E R+ LQ L+ KY VD+ ++ H H+YER PIY N +
Sbjct: 296 L--DDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVFNGSR 353
Query: 527 NYYKGTLNGTIHVVAGGGGA--GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL-LFEY 583
G +H++ G G L F WS R +YG+ +L + +++ + +
Sbjct: 354 EMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILNGTHIHIQQV 413
Query: 584 KKSSDGKVYDSFRISR 599
DGK+ D + R
Sbjct: 414 SDDQDGKIVDDVWVVR 429
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 64/406 (15%)
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
+ M VT+T+ +N A + V++G+ +D+ + + + T + + G I
Sbjct: 62 DHMRVTYTTD-DLNVA-SMVEYGKHPK----------KYDKKTAGESTSYTYFFYNSGKI 109
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP--YPGQNSLQRVVIFGDMGKD 305
H + L PN Y Y+ G E+ FK P +P + + GD+G+
Sbjct: 110 HHVKIGPLKPNTKYYYRCGGH--------GDEFSFKTPPSKFPIE-----FAVAGDLGQ- 155
Query: 306 EADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 365
D+ +L+ R+ ++ D+ GD+ YA+ + WD F +E +AS
Sbjct: 156 --------TDWTVRTLDQIRK-----RDFDVFLLPGDLSYADTHQPLWDSFGRLLETLAS 202
Query: 366 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRF 425
T P+M+ GNHE + SF N + M + + + + +YS D
Sbjct: 203 TRPWMVTEGNHEIE-----SFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHT 257
Query: 426 CVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPM 485
+ + + ++QY +++ L VDR+K PWL+ + H YS+ + +G E M
Sbjct: 258 VMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH-TPWYSTNKAHYGEG---EKM 313
Query: 486 GRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGG 545
R +L+ L + +VD+ GHVH YER PIY K G +++ G GG
Sbjct: 314 -RSALESLLYRAQVDVVFAGHVHTYERFKPIYNK----------KADPCGPMYITIGDGG 362
Query: 546 --AGLA-EFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSD 588
GLA F Q+ S +R+ +G +L DH + + +++D
Sbjct: 363 NREGLALRFKKPQSPLSEFRESSFGHGRLRIIDHKRAHWSWHRNND 408
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|A5D6U8|PAPL_DANRE Iron/zinc purple acid phosphatase-like protein OS=Danio rerio GN=papl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 182/446 (40%), Gaps = 86/446 (19%)
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGY 246
N M VTW+S N+ ++ V++G GG +HS G + GA R + Y
Sbjct: 43 NSMLVTWSSA---NKTDSVVEYGLWGGKLFSHSATGNSSIFINE--GAEYRVM------Y 91
Query: 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-----PGQNSLQRVVIFGD 301
IH L +L P A Y Y G S WS + F A PG +FGD
Sbjct: 92 IHRVLLTDLRPAASYVYHCG-----SGAGWSELFFFTALNESVFFSPG------FALFGD 140
Query: 302 MGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFT 357
+G + SL+ ++ Q + D++ HIGD Y NG I D+F
Sbjct: 141 LGNENPQ-----------SLSRLQKETQ-IGTYDVILHIGDFAYDLYEDNGRIG--DEFM 186
Query: 358 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYS 417
QI+ IA+ VPYM GNHE W S Y + F +P + WYS
Sbjct: 187 KQIQSIAAYVPYMTCPGNHE--WAFNFSQYRAR-------------FSMPGDTEG-LWYS 230
Query: 418 TDYGMFRFCVADTE---HDWREGTE----QYKFIEHCLASVDR----QKQPWLIFLAHRV 466
+ G TE + G + QY+++ L +R ++PW+I + HR
Sbjct: 231 WNVGPAHIISFSTEVYFYYLEYGLDLLFRQYEWLRADLQEANRPENRAERPWIITMGHRP 290
Query: 467 LGYSSG--------IFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 518
+ S+ Y G L++L+ +Y VD+ ++ H H YER P+Y
Sbjct: 291 MYCSNDDDDDCTHFQSYVRLGRNDTKPPAPGLEELFYQYGVDLELWAHEHTYERLWPVYD 350
Query: 519 NICTNKEKNYYKGTLNGTIHVVAGGGGAGLAE--FTPLQTTWSLYRDYDYGFVKLTAFDH 576
N +H++ G G F P WS +R DYG+ +L ++
Sbjct: 351 YKVFNGSSEEPYVNPKAPVHIITGSAGCREKHDGFIPKPRDWSAFRSTDYGYTRLQLINN 410
Query: 577 SNLLFEYKKSSD--GKVYDSFRISRD 600
++L E + S D GKV D + ++
Sbjct: 411 THLYLE-QVSDDQYGKVIDQMTLVKE 435
|
Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 619 | ||||||
| 224112110 | 614 | predicted protein [Populus trichocarpa] | 0.988 | 0.996 | 0.833 | 0.0 | |
| 297738089 | 672 | unnamed protein product [Vitis vinifera] | 0.988 | 0.910 | 0.825 | 0.0 | |
| 359472541 | 612 | PREDICTED: probable inactive purple acid | 0.988 | 1.0 | 0.825 | 0.0 | |
| 224098974 | 621 | predicted protein [Populus trichocarpa] | 0.987 | 0.983 | 0.800 | 0.0 | |
| 449452841 | 612 | PREDICTED: probable inactive purple acid | 0.988 | 1.0 | 0.799 | 0.0 | |
| 18075960 | 612 | putative metallophosphatase [Lupinus lut | 0.988 | 1.0 | 0.789 | 0.0 | |
| 255542026 | 615 | hydrolase, putative [Ricinus communis] g | 0.959 | 0.965 | 0.823 | 0.0 | |
| 356567597 | 611 | PREDICTED: probable inactive purple acid | 0.987 | 1.0 | 0.792 | 0.0 | |
| 363807632 | 613 | probable inactive purple acid phosphatas | 0.988 | 0.998 | 0.799 | 0.0 | |
| 356526862 | 616 | PREDICTED: probable inactive purple acid | 0.993 | 0.998 | 0.780 | 0.0 |
| >gi|224112110|ref|XP_002316086.1| predicted protein [Populus trichocarpa] gi|222865126|gb|EEF02257.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/613 (83%), Positives = 556/613 (90%), Gaps = 1/613 (0%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
MR L L+FF ILLVL T QVA+SHG PLSRIA+ L +NA +KASP+V+GLKGQN
Sbjct: 2 MRGLELVFFAILLVLATLQVANSHGEQPLSRIAVHNTRLQLFENADIKASPSVLGLKGQN 61
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVN-PPLLCSAPIKYQYANYSSP 126
SEWVT+EY+SPNPS DDWI VFSP+NFSASTC+ ++ S PP LC+APIKYQYANYSSP
Sbjct: 62 SEWVTLEYASPNPSNDDWIGVFSPANFSASTCNPDDGSKQAPPFLCTAPIKYQYANYSSP 121
Query: 127 QYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKT 186
Y+ GKGSL+L LINQRSDFS LFSGGL PK+VAVSNK+AFTNPNAPVYPRLAQGK
Sbjct: 122 GYRKEGKGSLRLQLINQRSDFSFVLFSGGLTNPKVVAVSNKVAFTNPNAPVYPRLAQGKI 181
Query: 187 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246
WNEMTVTWTSGYGINEAE FV+WGRK GD SPAGTLTF+R SMCGAPARTVGWRDPG+
Sbjct: 182 WNEMTVTWTSGYGINEAEPFVEWGRKDGDHMRSPAGTLTFNRNSMCGAPARTVGWRDPGF 241
Query: 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDE 306
IHTSFLKELWPN++YTYK+GH+LFN TY+WS YQF+ASPYPGQ+S+QRVVIFGDMGKDE
Sbjct: 242 IHTSFLKELWPNSVYTYKLGHKLFNGTYVWSQVYQFRASPYPGQSSVQRVVIFGDMGKDE 301
Query: 307 ADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 366
ADGSNEYN+FQ SLNTT+QLIQDLKNIDIVFHIGDICYANGY+SQWDQFTAQ+EPIAST
Sbjct: 302 ADGSNEYNNFQRGSLNTTKQLIQDLKNIDIVFHIGDICYANGYLSQWDQFTAQVEPIAST 361
Query: 367 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 426
VPYMIASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC
Sbjct: 362 VPYMIASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 421
Query: 427 VADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 486
+ADTEHDWREGTEQYKFIEHCLAS DRQKQPWLIFLAHRVLGYSS +YA GSF EPMG
Sbjct: 422 IADTEHDWREGTEQYKFIEHCLASADRQKQPWLIFLAHRVLGYSSATWYADQGSFEEPMG 481
Query: 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 546
RESLQKLWQKYKVDIA+YGHVHNYERTCPIYQNICT+KEK +YKGTLNGTIHVVAGGGGA
Sbjct: 482 RESLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTSKEKFFYKGTLNGTIHVVAGGGGA 541
Query: 547 GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 606
LA+FTP+ TTWS ++D+DYGFVKLTAFDHSNLLFEYKKS DG+VYDSF+ISRDYRDILA
Sbjct: 542 SLADFTPINTTWSYFKDHDYGFVKLTAFDHSNLLFEYKKSRDGEVYDSFKISRDYRDILA 601
Query: 607 CTVGSCPSTTLAS 619
CTV SCPS TLAS
Sbjct: 602 CTVDSCPSMTLAS 614
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738089|emb|CBI27290.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/612 (82%), Positives = 548/612 (89%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
MR IL L + A SHG PL++IAI A +AL+D AYVKASP V+GL GQN
Sbjct: 61 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 120
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 127
+E+VTVE+SSP+PSVDDWI VFSP+NFSASTC E+ V PPLLCSAPIKYQYANY+SP
Sbjct: 121 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 180
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
YK TGKGSLKL LINQRSDFS ALFSGGL+ PKLVAVSN +AF NPNAPVYPRLAQGK W
Sbjct: 181 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 240
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
NEMTVTWTSGYGIN+A F++WG KGGD+ SPAGTLTFDR SMCGAPA TVGWRDPGYI
Sbjct: 241 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 300
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 307
HTSFLKELWPN +Y+YK+GHRLFN TYIWS +YQF+ASPYPGQNSLQRVVIFGDMGKDEA
Sbjct: 301 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 360
Query: 308 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367
DGSNEYN +Q SLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 361 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 420
Query: 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427
PYMIASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRAKFWYSTD+GMFRFC+
Sbjct: 421 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 480
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
ADTEHDWREGTEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMGR
Sbjct: 481 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 540
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 547
+ LQKLWQKYKVDIA+YGHVHNYERTCPIYQNICTN+EK+YYKGTLNGTIHVVAGGGGA
Sbjct: 541 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGAS 600
Query: 548 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 607
LA+FT + T WS+++DYDYGFVKLTAFDHSNLLFEYKKS DGKVYDSFRISR YRDILAC
Sbjct: 601 LADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILAC 660
Query: 608 TVGSCPSTTLAS 619
TV SCPS+TLAS
Sbjct: 661 TVDSCPSSTLAS 672
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472541|ref|XP_002274118.2| PREDICTED: probable inactive purple acid phosphatase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/612 (82%), Positives = 548/612 (89%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
MR IL L + A SHG PL++IAI A +AL+D AYVKASP V+GL GQN
Sbjct: 1 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 60
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 127
+E+VTVE+SSP+PSVDDWI VFSP+NFSASTC E+ V PPLLCSAPIKYQYANY+SP
Sbjct: 61 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 120
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
YK TGKGSLKL LINQRSDFS ALFSGGL+ PKLVAVSN +AF NPNAPVYPRLAQGK W
Sbjct: 121 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 180
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
NEMTVTWTSGYGIN+A F++WG KGGD+ SPAGTLTFDR SMCGAPA TVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 240
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 307
HTSFLKELWPN +Y+YK+GHRLFN TYIWS +YQF+ASPYPGQNSLQRVVIFGDMGKDEA
Sbjct: 241 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 308 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367
DGSNEYN +Q SLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 301 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 360
Query: 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427
PYMIASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRAKFWYSTD+GMFRFC+
Sbjct: 361 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 420
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
ADTEHDWREGTEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 480
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 547
+ LQKLWQKYKVDIA+YGHVHNYERTCPIYQNICTN+EK+YYKGTLNGTIHVVAGGGGA
Sbjct: 481 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGAS 540
Query: 548 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 607
LA+FT + T WS+++DYDYGFVKLTAFDHSNLLFEYKKS DGKVYDSFRISR YRDILAC
Sbjct: 541 LADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILAC 600
Query: 608 TVGSCPSTTLAS 619
TV SCPS+TLAS
Sbjct: 601 TVDSCPSSTLAS 612
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098974|ref|XP_002311341.1| predicted protein [Populus trichocarpa] gi|222851161|gb|EEE88708.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/622 (80%), Positives = 547/622 (87%), Gaps = 11/622 (1%)
Query: 8 MRELRLIFFGILLVLGTF-QVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQ 66
MR L L+FF LVL T QV +SHG PLSRI ++ L++NAYVKASP+++GLKGQ
Sbjct: 1 MRGLGLVFFAFFLVLATLLQVTTSHGEQPLSRIVVQNTELHLSENAYVKASPSILGLKGQ 60
Query: 67 NSEWVTVEYSSPNPSVDDWIAVFSPSNFSA--------STCSAENPS-VNPPLLCSAPIK 117
N EWVT+EY+SPNPS+DDWI VFSP++FSA STC+ ++ S + PP LC+APIK
Sbjct: 61 NFEWVTLEYASPNPSIDDWIGVFSPADFSAYFLSISTASTCTPDDGSKLAPPFLCTAPIK 120
Query: 118 YQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPV 177
YQYANYSSP Y+ TGKGSL+L LINQRSDFS LFSGGL PKL+AVSNK+AFTNPNAPV
Sbjct: 121 YQYANYSSPGYRKTGKGSLRLQLINQRSDFSSVLFSGGLSNPKLMAVSNKVAFTNPNAPV 180
Query: 178 YPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPAR 237
YPRLAQGK WNEMTVTWT GYGINEAE FV+WG+K GDR HS AGTLTFDR S+CGAPAR
Sbjct: 181 YPRLAQGKIWNEMTVTWTCGYGINEAEPFVEWGQKDGDRMHSLAGTLTFDRNSLCGAPAR 240
Query: 238 TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVV 297
TVGWRDPG+IHTSFLKELWPNA+YTYK+GH+LFN TY+WS EYQF+ASPYPGQ+S+QRVV
Sbjct: 241 TVGWRDPGFIHTSFLKELWPNAVYTYKLGHKLFNGTYVWSQEYQFRASPYPGQSSVQRVV 300
Query: 298 IFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT 357
IFGDMGKDEADGSNEYN++Q SLNTT+QL QDLKNIDIVFHIGDICYANGY+SQWDQFT
Sbjct: 301 IFGDMGKDEADGSNEYNNYQRGSLNTTKQLSQDLKNIDIVFHIGDICYANGYLSQWDQFT 360
Query: 358 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYS 417
AQ+EPIASTVPYM+ASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRA FWYS
Sbjct: 361 AQVEPIASTVPYMVASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRANFWYS 420
Query: 418 TDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 477
TDYGM RFC ADTEHDWRE TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYS FYA
Sbjct: 421 TDYGMLRFCRADTEHDWREATEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSFSTFYAD 480
Query: 478 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTI 537
+GSF EPMGRESLQKLWQKYKVDIAIYGH HNYERTCPIYQNICT+KEK+YYKG LNGTI
Sbjct: 481 EGSFEEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPIYQNICTSKEKSYYKGALNGTI 540
Query: 538 HVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 597
H VAGGGGA LA+FTP+ TTWS ++D+DYGFVKLTAFDHSNLL EYKKS DGK YDSF+I
Sbjct: 541 H-VAGGGGASLADFTPINTTWSYFKDHDYGFVKLTAFDHSNLLLEYKKSRDGKFYDSFKI 599
Query: 598 SRDYRDILACTVGSCPSTTLAS 619
SR YRDI CTV SCPS TLAS
Sbjct: 600 SRGYRDITVCTVDSCPSMTLAS 621
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452841|ref|XP_004144167.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/612 (79%), Positives = 538/612 (87%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
MR L + GIL +L T SHG HP S+IAIRK T+ALN +A VKASP+V+GLKG+N
Sbjct: 1 MRFLGFVCLGILWILATLHQVKSHGNHPFSKIAIRKTTFALNKHANVKASPSVLGLKGEN 60
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 127
+EWVT+EYSSP+PS DDWI VFSP+NFS+STC ENP V PPLLCSAPIK+ +ANY++
Sbjct: 61 TEWVTLEYSSPDPSSDDWIGVFSPANFSSSTCPVENPRVYPPLLCSAPIKFLFANYTNAN 120
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
YK TG+G LKL LINQR+DFS ALFSGGL KPK+VA+SN++ F NP+AP+YPRLAQGK W
Sbjct: 121 YKTTGRGLLKLQLINQRADFSFALFSGGLSKPKVVAISNRVTFANPDAPLYPRLAQGKNW 180
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
NEMTVTWTSGYGI+EAE V W + G D SPAGTLTFDR SMCGAPART GWRDPG+I
Sbjct: 181 NEMTVTWTSGYGIDEAEPLVAWSQNGKDLMQSPAGTLTFDRNSMCGAPARTEGWRDPGFI 240
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 307
HTSFLKELWPN YTYK+GH+L N TYIWSS Y+FKASPYPGQNSLQRVVIFGDMGKDEA
Sbjct: 241 HTSFLKELWPNQEYTYKLGHKLNNGTYIWSSTYKFKASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 308 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367
DGSNEYN+FQ SLNTTRQLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQI PIASTV
Sbjct: 301 DGSNEYNNFQRGSLNTTRQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQIGPIASTV 360
Query: 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427
PYMIASGNHERDWPG+GSFY DSGGECGV+A+ MFYVPAENR KFWY+TDYGMFRFCV
Sbjct: 361 PYMIASGNHERDWPGSGSFYDTMDSGGECGVVAQNMFYVPAENREKFWYATDYGMFRFCV 420
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
A+TE DWREGTEQYKFIEHCL+SVDRQKQPWLIFLAHRVLGYSS FYA GS +EPMGR
Sbjct: 421 ANTELDWREGTEQYKFIEHCLSSVDRQKQPWLIFLAHRVLGYSSCTFYAEQGSSSEPMGR 480
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 547
ESLQ LWQKYKVD+AIYGHVH+YERTCPIYQNICTN++K+YYKG LNGTIHVVAGGGGA
Sbjct: 481 ESLQSLWQKYKVDLAIYGHVHSYERTCPIYQNICTNEKKHYYKGPLNGTIHVVAGGGGAS 540
Query: 548 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 607
L+ F LQT WS++RDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC
Sbjct: 541 LSPFISLQTKWSIFRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
Query: 608 TVGSCPSTTLAS 619
V SCP TTLAS
Sbjct: 601 AVDSCPRTTLAS 612
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18075960|emb|CAD12837.1| putative metallophosphatase [Lupinus luteus] | Back alignment and taxonomy information |
|---|
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/612 (78%), Positives = 538/612 (87%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
M + + +F G LLV Q+ SHG HPLS+++I +A+ +L D A++K SP ++GL+GQ
Sbjct: 1 MGDSKFVFLGYLLVCSVLQLVWSHGDHPLSKVSIHRASLSLLDLAHIKVSPPILGLQGQT 60
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 127
+EWVT+EYSSP PS+DDWI VFSPSNFSAS C AEN V PPLLCSAPIKYQYANYS+PQ
Sbjct: 61 AEWVTLEYSSPIPSIDDWIGVFSPSNFSASACPAENRRVYPPLLCSAPIKYQYANYSNPQ 120
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
Y TGKG LKL LINQRSDFS A+FSGGL PK+VA+SNKI+F NPNAPVYPRLA GK W
Sbjct: 121 YSATGKGILKLQLINQRSDFSFAMFSGGLSNPKVVAISNKISFANPNAPVYPRLAMGKLW 180
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
NEMTVTWTSGYGINEA+ VQWG KGGD HSPAGTLTF + S+CGAPARTVGWRDPG+I
Sbjct: 181 NEMTVTWTSGYGINEADPLVQWGPKGGDHIHSPAGTLTFTKDSLCGAPARTVGWRDPGFI 240
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 307
HTS+LKELWPN +Y YK+GHRL N TYIWS YQF+A+P+PGQ SLQRV IFGDMGKDE
Sbjct: 241 HTSYLKELWPNRIYEYKIGHRLNNGTYIWSQNYQFRAAPFPGQKSLQRVAIFGDMGKDEV 300
Query: 308 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367
DGSNEYN+FQ SLNTT+QLIQDL+NID+VFHIGDI YANGY+SQWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQRGSLNTTQQLIQDLENIDMVFHIGDISYANGYLSQWDQFTAQVEPIASAV 360
Query: 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427
PYMIASG+HERDWPGTGSFY N DSGGECGVLA+ MFYVPA NRAKFWY DYGMFRF +
Sbjct: 361 PYMIASGSHERDWPGTGSFYENMDSGGECGVLAQIMFYVPASNRAKFWYPIDYGMFRFRI 420
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSS I YA +GSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 547
ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICT++EK++YKGTLNGTIH+VAGG GA
Sbjct: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTSEEKHHYKGTLNGTIHIVAGGAGAS 540
Query: 548 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 607
L+ FT L+T WS+++DYD+GFVKLTAFDHSNLLFEYKKS DGKVYDSF+ISRDYRDILAC
Sbjct: 541 LSTFTSLKTKWSIFKDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILAC 600
Query: 608 TVGSCPSTTLAS 619
TV SCP TTLAS
Sbjct: 601 TVDSCPRTTLAS 612
|
Source: Lupinus luteus Species: Lupinus luteus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542026|ref|XP_002512077.1| hydrolase, putative [Ricinus communis] gi|223549257|gb|EEF50746.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/596 (82%), Positives = 536/596 (89%), Gaps = 2/596 (0%)
Query: 26 QVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDW 85
Q A S GG P SRIA K T++LN NAYVKASP+++G++GQNSEW+TVEY+S NPS+ DW
Sbjct: 20 QEARSQGGQPFSRIAFHKTTFSLNGNAYVKASPSILGIRGQNSEWITVEYTSTNPSIADW 79
Query: 86 IAVFSPSNFSASTCSAENP--SVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQ 143
I VFSP+NFSAS+C+ E+ V PP LCSAP+K+QYANYSSP YK TGKGSL+L LINQ
Sbjct: 80 IGVFSPANFSASSCNPESSSSKVAPPFLCSAPVKFQYANYSSPGYKDTGKGSLRLRLINQ 139
Query: 144 RSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA 203
RSDFS ALFSGGL PKLVAVSN +AF NPNAPVYPRLAQGK WNEMTVTWTSGYGINEA
Sbjct: 140 RSDFSFALFSGGLGNPKLVAVSNIVAFANPNAPVYPRLAQGKIWNEMTVTWTSGYGINEA 199
Query: 204 EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTY 263
E FV+WG KGGD SPAGTLTF SMCG+PARTVGWRDPG+IHTSFLKELWPN +Y Y
Sbjct: 200 EPFVEWGPKGGDLKRSPAGTLTFTPNSMCGSPARTVGWRDPGFIHTSFLKELWPNVLYKY 259
Query: 264 KVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 323
K+GH+L N TYIWS +YQF+ASPYPGQ+SLQRVVIFGDMGKDE DGSNEYN+FQ+ SLNT
Sbjct: 260 KLGHKLLNGTYIWSQDYQFRASPYPGQSSLQRVVIFGDMGKDEIDGSNEYNNFQHGSLNT 319
Query: 324 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT 383
T+QLIQDLKNIDIVFHIGDICYANGYISQWDQFT+Q+EPIASTVPYMIASGNHERDWPGT
Sbjct: 320 TKQLIQDLKNIDIVFHIGDICYANGYISQWDQFTSQVEPIASTVPYMIASGNHERDWPGT 379
Query: 384 GSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKF 443
GSFYGN DSGGECGV A+TMFYVP ENR FWYSTDYGMFRFC+ADTEHDWREGTEQYKF
Sbjct: 380 GSFYGNTDSGGECGVPAQTMFYVPTENRDNFWYSTDYGMFRFCIADTEHDWREGTEQYKF 439
Query: 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAI 503
IEHCLASVDRQKQPWL+FLAHRVLGYSS +YA +GSF EPMGRESLQKLWQKYKVDIAI
Sbjct: 440 IEHCLASVDRQKQPWLVFLAHRVLGYSSASWYADEGSFEEPMGRESLQKLWQKYKVDIAI 499
Query: 504 YGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRD 563
YGHVHNYERTCPIYQNICTN+EK+ YKG LNGTIHVVAGGGGA LA+FT + TTWS ++D
Sbjct: 500 YGHVHNYERTCPIYQNICTNQEKHSYKGALNGTIHVVAGGGGASLADFTTINTTWSYFKD 559
Query: 564 YDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLAS 619
+DYGFVKLTAFDHSNLLFEYKKS DGKVYDSF+ISRDYRDILACTV SCPSTTLAS
Sbjct: 560 HDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILACTVDSCPSTTLAS 615
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567597|ref|XP_003552004.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/612 (79%), Positives = 544/612 (88%), Gaps = 1/612 (0%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
M + R++FF +LVL TFQ A S PLS++AI K T AL++ A++KA+P V+GLKGQN
Sbjct: 1 MGKSRVLFFS-MLVLATFQKAVSEEHQPLSKVAIHKTTLALDERAFIKATPNVLGLKGQN 59
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 127
+EWVT++YS+P P+VDDWI VFSP+NF+ASTC AEN VNPP LCSAPIKYQYAN+SS
Sbjct: 60 TEWVTLQYSNPKPTVDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHG 119
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
YK TGKGSLKL LINQRSDFS ALF+GGL PKLVAVSNK++F NPNAPVYPRLAQGKTW
Sbjct: 120 YKNTGKGSLKLQLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTW 179
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
+EMTVTWTSGY I++AE FV+WG KGG+ SPAGTLTFDR +MCGAPARTVGWRDPGYI
Sbjct: 180 DEMTVTWTSGYEISDAEPFVEWGPKGGNLVKSPAGTLTFDRNTMCGAPARTVGWRDPGYI 239
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 307
HTSFLKELWPN Y YK+GH+LFN T IWS EYQFKASPYPGQNSLQRVVIFGDMGK EA
Sbjct: 240 HTSFLKELWPNREYKYKLGHKLFNGTIIWSQEYQFKASPYPGQNSLQRVVIFGDMGKAEA 299
Query: 308 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367
DGSNEYN+FQ SLNTT+Q+IQDLK+IDIVF+IGD+ YANGY+SQWDQFTAQIEPIASTV
Sbjct: 300 DGSNEYNNFQPGSLNTTKQIIQDLKDIDIVFNIGDLSYANGYLSQWDQFTAQIEPIASTV 359
Query: 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427
PYM ASGNHERDWP TGSFYGN DSGGECGVLA+TMFYVPAENR KFWYS DYGMFRFC+
Sbjct: 360 PYMTASGNHERDWPDTGSFYGNLDSGGECGVLAQTMFYVPAENREKFWYSVDYGMFRFCI 419
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
A+TE DWR+G+EQYKFIE+CLASVDRQKQPWLIFLAHRVLGYSS FY +GSF EPMGR
Sbjct: 420 ANTELDWRKGSEQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGR 479
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 547
E LQ LWQKYKVDIA+YGHVHNYERTCP+YQNICTNKE++ YKG+L+GTIHVV GGGGA
Sbjct: 480 EDLQYLWQKYKVDIAMYGHVHNYERTCPVYQNICTNKEEHNYKGSLDGTIHVVVGGGGAS 539
Query: 548 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 607
LAEF P+ TTWS+++D+D+GFVKLTAFDHSNLLFEYKKSSDG+VYDSF+ISR YRDILAC
Sbjct: 540 LAEFAPINTTWSIFKDHDFGFVKLTAFDHSNLLFEYKKSSDGQVYDSFKISRQYRDILAC 599
Query: 608 TVGSCPSTTLAS 619
TV SCP TTLAS
Sbjct: 600 TVDSCPPTTLAS 611
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363807632|ref|NP_001242158.1| probable inactive purple acid phosphatase 1-like precursor [Glycine max] gi|304421410|gb|ADM32504.1| purple acid phosphatases [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/613 (79%), Positives = 535/613 (87%), Gaps = 1/613 (0%)
Query: 8 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 67
M E + + LLV Q SHG HPLS++A+ KAT +L D AY+KASPAV+GL+ Q
Sbjct: 1 MGESKFVSLAFLLVCLVVQRVWSHGYHPLSKVAVHKATVSLLDLAYIKASPAVLGLQEQT 60
Query: 68 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 127
+EWVT+EYSSP PS+ DWI VFSP+NFSASTC EN V PPLLCSAPIKYQYANYSSP
Sbjct: 61 AEWVTLEYSSPIPSIGDWIGVFSPANFSASTCPKENRRVYPPLLCSAPIKYQYANYSSPL 120
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
YK TGKG LKL+LINQRSDFS ALFSGGL PKLVAVS+KIAF NPNAP+YPRLA GK+W
Sbjct: 121 YKETGKGFLKLLLINQRSDFSFALFSGGLSNPKLVAVSDKIAFANPNAPLYPRLALGKSW 180
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247
NEMTVTWTSGYGIN+AE FVQWG K GDR HSPA TLTF R SMCGAPARTVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAEPFVQWGPKEGDRMHSPAETLTFTRDSMCGAPARTVGWRDPGYI 240
Query: 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 307
HTS LKELWPN +Y Y++GH+L N TYIWS YQF A P PGQ SLQRVVIFGDMGK E
Sbjct: 241 HTSHLKELWPNKIYEYRIGHKLNNVTYIWSGNYQFTAPPCPGQKSLQRVVIFGDMGKGEV 300
Query: 308 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367
DGSNEYN+FQ+ S+NTT+QLIQDL++IDIVFHIGDICYANGY+ QWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQHGSINTTQQLIQDLEDIDIVFHIGDICYANGYLPQWDQFTAQVEPIASAV 360
Query: 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427
PYMIASGNHERDWPGTGSFY N DSGGECGVLA+TMFY PA NRAK WYS DYGMFRFC+
Sbjct: 361 PYMIASGNHERDWPGTGSFYENMDSGGECGVLAQTMFYTPASNRAKLWYSIDYGMFRFCI 420
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
ADTEHDWREGTEQYKFIEHCLASVDRQKQPW+IFLAHRVLGYSS I YA +GSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWIIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKG-TLNGTIHVVAGGGGA 546
ES QKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN+EK++YKG TLNGTIHVVAGGGGA
Sbjct: 481 ESFQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNEEKHHYKGRTLNGTIHVVAGGGGA 540
Query: 547 GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 606
L+ FT L+T WS+++DYDYGFVKLTAFDHSNLLFEYKKS DGKVYDSF+ISRDYRDILA
Sbjct: 541 SLSAFTSLKTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILA 600
Query: 607 CTVGSCPSTTLAS 619
CT+ SCPS T+AS
Sbjct: 601 CTMDSCPSITMAS 613
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526862|ref|XP_003532035.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/616 (78%), Positives = 544/616 (88%), Gaps = 1/616 (0%)
Query: 4 ILVRMRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGL 63
++ M R++ F LLVL TFQ S PLS++AI K T AL++ AY+KA+P+V+GL
Sbjct: 2 MMSGMGNSRVLIFS-LLVLATFQQVVSDEHQPLSKVAIHKTTLALDERAYIKATPSVLGL 60
Query: 64 KGQNSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANY 123
KGQN+EWVT++YS+P P++DDWI VFSP+NF+ASTC AEN VNPP LCSAPIKYQYAN+
Sbjct: 61 KGQNTEWVTLQYSNPKPTIDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANF 120
Query: 124 SSPQYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQ 183
SS YK TGKGSLKL LINQRSDFS ALF+GGL PKLVAVSNK++F NPNAPVYPRLAQ
Sbjct: 121 SSHGYKNTGKGSLKLQLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQ 180
Query: 184 GKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 243
GKTW+E+TVTWTSGYGI++AE FV+WG KGG+ SPAGTLTFD +MCGAPARTVGWRD
Sbjct: 181 GKTWDEITVTWTSGYGISDAEPFVEWGPKGGNLVKSPAGTLTFDHNTMCGAPARTVGWRD 240
Query: 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMG 303
PGYIHTSFLKELWPN Y YK+GHRLFN T IWS EYQFKASP+PGQNSLQRVVIFGD+G
Sbjct: 241 PGYIHTSFLKELWPNQEYKYKLGHRLFNGTIIWSQEYQFKASPFPGQNSLQRVVIFGDLG 300
Query: 304 KDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPI 363
K EADGSNEYN+FQ SLNTT+Q++QDLK+IDIVFHIGD+CYA+GY+SQWDQFTAQIEPI
Sbjct: 301 KAEADGSNEYNNFQPGSLNTTKQIVQDLKDIDIVFHIGDLCYASGYLSQWDQFTAQIEPI 360
Query: 364 ASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMF 423
ASTVPYM ASGNHERDWP TGSFYG DSGGECGV A+T FYVPAENR KFWYS DYGMF
Sbjct: 361 ASTVPYMTASGNHERDWPDTGSFYGTLDSGGECGVPAQTTFYVPAENREKFWYSVDYGMF 420
Query: 424 RFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 483
RFC+A+TE DWR+G+EQYKFIE+CLA+VDRQKQPWLIFLAHRVLGYSS FYA +GSF E
Sbjct: 421 RFCIANTELDWRKGSEQYKFIENCLATVDRQKQPWLIFLAHRVLGYSSAGFYAAEGSFEE 480
Query: 484 PMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGG 543
PMGRE LQ LWQKYKVDIA+YGHVHNYERTCP+YQNICTNKEKN YKG+L+GTIHVV GG
Sbjct: 481 PMGREDLQYLWQKYKVDIAMYGHVHNYERTCPVYQNICTNKEKNNYKGSLDGTIHVVVGG 540
Query: 544 GGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRD 603
GGA LAEF P+ TTWS+++D+D+GFVKLTAFDHSN LFEYKKSSDG+VYDSFRISR+YRD
Sbjct: 541 GGASLAEFAPINTTWSIFKDHDFGFVKLTAFDHSNFLFEYKKSSDGQVYDSFRISREYRD 600
Query: 604 ILACTVGSCPSTTLAS 619
ILACTV SCP+TTLAS
Sbjct: 601 ILACTVDSCPATTLAS 616
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 619 | ||||||
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 0.988 | 0.998 | 0.760 | 1.9e-264 | |
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.969 | 0.981 | 0.685 | 1.5e-234 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.953 | 0.959 | 0.655 | 5.2e-223 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.416 | 0.434 | 0.374 | 1.5e-57 | |
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.705 | 0.666 | 0.326 | 2.6e-55 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.523 | 0.497 | 0.315 | 3.3e-51 | |
| DICTYBASE|DDB_G0282559 | 431 | dduA "N-terminal purple acid p | 0.539 | 0.774 | 0.279 | 1e-27 | |
| DICTYBASE|DDB_G0268222 | 492 | DDB_G0268222 "acid phosphatase | 0.617 | 0.776 | 0.266 | 2.1e-24 | |
| DICTYBASE|DDB_G0285351 | 454 | DDB_G0285351 [Dictyostelium di | 0.554 | 0.755 | 0.263 | 5.2e-21 | |
| FB|FBgn0030245 | 458 | CG1637 [Drosophila melanogaste | 0.508 | 0.687 | 0.275 | 3.5e-20 |
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2544 (900.6 bits), Expect = 1.9e-264, P = 1.9e-264
Identities = 466/613 (76%), Positives = 516/613 (84%)
Query: 8 MRE-LRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQ 66
MRE L I ++ VLG SH PLS IA+ K T+ LN+ AYVKASP V+G GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 67 NSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSP 126
+SE V V+YSSP PS DDWI VFSP++F+ASTC +N V PP LCSAP+K+QYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 127 QYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKT 186
+Y TG GSLKL LINQRSDFS ALFSGGLL PKLVA+SNK+AF NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 187 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246
W+EMTVTWTSGYG+N AE V+WG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDE 306
IHT+FLKELWPN+ YTY+VGHRL N IWS EYQFK+SP+PGQNS+Q+VVIFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 307 ADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 366
DGS+EYNDFQ ASLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 367 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 426
VPYMIASGNHER WP +GSFY DSGGECGV AETMFYVPA+NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 427 VADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 486
VADTEHDWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXX 546
RESLQKLWQKYKVDIAIYGH HNYERTCP+YQ++CT+ EK+ YK LNGTIH
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGA 540
Query: 547 XLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 606
LAEF+ LQ WSL+RDYDYGF+KLTA DHSNLLFEYKKSSDG+V+DSF IS+DYRDILA
Sbjct: 541 GLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTISKDYRDILA 600
Query: 607 CTVGSCPSTTLAS 619
C V SCP+TTLAS
Sbjct: 601 CAVDSCPATTLAS 613
|
|
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2262 (801.3 bits), Expect = 1.5e-234, P = 1.5e-234
Identities = 416/607 (68%), Positives = 479/607 (78%)
Query: 19 LLVLGTF--QVASSH----GGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVT 72
LLVL F QV+SSH G LS+I I A + +A++ SP V+G +GQ++EWV
Sbjct: 6 LLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWVN 65
Query: 73 VEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGTG 132
V S+P PS DDW+ VFSP+ F +S+C+ + P +CSAP+KY YA SSP Y TG
Sbjct: 66 VVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKTG 124
Query: 133 KGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTV 192
LK MLINQR+DFS ALF+GGL P LV+VSN ++F NP APVYPRLA GK W+EMTV
Sbjct: 125 NAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMTV 184
Query: 193 TWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252
TWTSGY I EA FV+W RKG SPAGTLTF R SMCGAPARTVGWRDPG+IHT+ L
Sbjct: 185 TWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTASL 244
Query: 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNE 312
K+LWPN YTY++GH L N + +WS + FK+SPYPGQ+SLQRV+IFGDMGK E DGSNE
Sbjct: 245 KDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNE 304
Query: 313 YNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372
YND+Q SLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+A
Sbjct: 305 YNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMVA 364
Query: 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH 432
SGNHERDWP +GSFYG KDSGGECGV AETMF PAEN+AKFWYS DYGMFRFCVADTEH
Sbjct: 365 SGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEH 424
Query: 433 DWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQK 492
DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS+ +Y +GSF EPMGRESLQK
Sbjct: 425 DWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQK 484
Query: 493 LWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFT 552
LWQKYKVDIA YGHVHNYERTCPIYQN C + EK++Y G GTIH L+ F+
Sbjct: 485 LWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSFS 544
Query: 553 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSC 612
L+ WS++RDYDYGFVKLTAFDHS+LLFEYKKSS+G V+DSF I R+YRD+LAC SC
Sbjct: 545 SLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDSC 604
Query: 613 PSTTLAS 619
TTLAS
Sbjct: 605 EPTTLAS 611
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2153 (763.0 bits), Expect = 5.2e-223, P = 5.2e-223
Identities = 388/592 (65%), Positives = 459/592 (77%)
Query: 28 ASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIA 87
A+ G L++I + + + AL+ + + ASP V+G +G+++EWV + S+P P+ DDWI
Sbjct: 24 ANGRGDQALAQINVYETSLALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIG 83
Query: 88 VFSPSNFSASTC-SAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSD 146
VFSP+ F + C P +CS+PIKY Y N S P Y +G +LK +INQR+D
Sbjct: 84 VFSPAKFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPDYMKSGNVTLKFQIINQRAD 142
Query: 147 FSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAF 206
S ALFS G+ +P L+ VSN +AF NP APVYPRLA GK W+EMTVTWTSGY I+EA F
Sbjct: 143 VSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNWDEMTVTWTSGYNIDEAVPF 202
Query: 207 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVG 266
++W KG SPAGTLTF+R SMCG PAR VGWRDPG+ HTSFLKELWPN Y Y++G
Sbjct: 203 IEWSAKGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLG 262
Query: 267 HRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQ 326
H L N + IWS Y F +SPYPGQ+S QRV+IFGDMGK E DGSNEYND+Q SLNTT Q
Sbjct: 263 HDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQ 322
Query: 327 LIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSF 386
+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSF
Sbjct: 323 VIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSF 382
Query: 387 YGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEH 446
Y DSGGECGV AETMFY PAENRAKFWY TDYGMFRFCVAD+EHDWREGTEQYKFIE+
Sbjct: 383 YAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIEN 442
Query: 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 506
CLA+VDR+ QPWLIF+AHRVLGYS+ +Y +G+F EPMGRESLQKLWQKYKVD+A YGH
Sbjct: 443 CLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGH 502
Query: 507 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDY 566
VHNYERTCPIY++ C N +K++Y GT GTIH L+ F+ L WSL RDYD+
Sbjct: 503 VHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDF 562
Query: 567 GFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLA 618
GFVKLTA DHS+LLFEYKKSS G+VYDSF ISRDYRD+LACT SC TT A
Sbjct: 563 GFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 614
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 431 (156.8 bits), Expect = 1.5e-57, Sum P(2) = 1.5e-57
Identities = 103/275 (37%), Positives = 150/275 (54%)
Query: 337 VFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPG-----TGSFYGNKD 391
V HIGDI YA G WD F ++PI S VPYM++ GNHE D+ G + S YG+ D
Sbjct: 325 VHHIGDISYARGKAFIWDYFMDSMQPIVSKVPYMVSIGNHEYDFIGQPFAPSWSNYGS-D 383
Query: 392 SGGECGVLAETMFYVP-AENRAK-FWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLA 449
SGGECGV F++ AE+ + W+S + G F V EHD+ G+ Q++++ + LA
Sbjct: 384 SGGECGVPYSKRFHMTGAEDSTRNLWFSYENGPIHFTVMSAEHDFLPGSPQFEWLNNDLA 443
Query: 450 SVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHN 509
SVDR+K PW+IF HR L Y+S + GS RE+++ L+QKY VD+A++GHVH
Sbjct: 444 SVDREKTPWVIFSGHRPL-YTSALPEDSIGSITAL--REAIEPLFQKYDVDMALWGHVHI 500
Query: 510 YERTCPIYQNI-CTNKEKN----YYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDY 564
YERTC N C + + + G T + WS++R
Sbjct: 501 YERTCGFIGNFTCADNDNDGTVHVIIGMAGNTYSVPWEGSDISSGNGHEDEPEWSIFRSI 560
Query: 565 DYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 599
YG V+ A + ++L FE+ + V+DSF +++
Sbjct: 561 SYGHVRFYA-NTTSLYFEFVGNHRSIVHDSFWLNK 594
|
|
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 168/514 (32%), Positives = 252/514 (49%)
Query: 49 NDNAYVKASPAVVGLKGQNSEWVTVEYSS-PNPSVDDWIAVFSPSNFSASTCSAENPSVN 107
+ A + SP + G + V +++S +PS DW+ ++SP E+P N
Sbjct: 21 DSKATISISPNALNRSGDS---VVIQWSGVDSPSDLDWLGLYSPP---------ESP--N 66
Query: 108 PPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLLKPK----- 160
I Y++ N SS +K G GS+ L L N RS+++ +F S + PK
Sbjct: 67 DHF-----IGYKFLNESST-WKD-GFGSISLPLTNLRSNYTFRIFRWSESEIDPKHKDHD 119
Query: 161 ---------LVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWG 210
L+A S ++ F + P L+ N M V + +G G E FV++G
Sbjct: 120 QNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG---EERFVRYG 176
Query: 211 RKGGDRTHSPAGT-LTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAMYTYKVGHR 268
+S A + ++R MC +PA T+GWRDPG+I + +K L Y Y+VG
Sbjct: 177 ESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQVG-- 234
Query: 269 LFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI 328
+ + WS + + A + ++ +FGDMG A + Q S++T + ++
Sbjct: 235 --SDSKGWSEIHSYIARDVTAEETV--AFMFGDMGC--ATPYTTFIRTQDESISTVKWIL 288
Query: 329 QDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERD----- 379
+D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY + GNHE D
Sbjct: 289 RDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDFSTQP 348
Query: 380 W-PG-TGSFYGNKDSGGECGVLAETMFYVPAEN------RA----KFWYSTDYGMFRFCV 427
W P S YGN D GGECGV F +P + +A +YS D G F
Sbjct: 349 WKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVY 407
Query: 428 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 487
TE ++ +G QY+FI+ L SVDR+K P+++ HR + +S D + M
Sbjct: 408 ISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSN--EVRDTMIRQKMV- 464
Query: 488 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC 521
E L+ L+ K V +A++GHVH YER CPI N C
Sbjct: 465 EHLEPLFVKNNVTLALWGHVHRYERFCPISNNTC 498
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 356 (130.4 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 124/393 (31%), Positives = 186/393 (47%)
Query: 52 AYVKASPAVVGLKGQNSEWVTVEYSS-PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPL 110
A + SP + G + V +++S +PS DW+ ++SP ++P +
Sbjct: 22 ATISISPQTLNRSG---DIVVIKWSGVESPSDLDWLGIYSPP---------DSPHDHF-- 67
Query: 111 LCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLLKPK-------- 160
I Y++ + SP ++ +G GS+ L L N RS+++ +F + + PK
Sbjct: 68 -----IGYKFLS-DSPTWQ-SGSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNP 120
Query: 161 ------LVAVSNKIAFTNP-NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR-K 212
L+ SN++ F N P L+ NEM V + +G G E EA ++G K
Sbjct: 121 LPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDG-EEREA--RYGEVK 177
Query: 213 GGDRTHSPAGTLTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFN 271
+ A + ++ MC APA TVGWRDPG+ + +K L Y Y+VG L
Sbjct: 178 DKLDNIAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG 237
Query: 272 STYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDF---QYASLNTTRQLI 328
WS + F + + +L +FGDMG Y F + SL+T + ++
Sbjct: 238 ----WSEIHSFVSRNEGSEETL--AFMFGDMGC-----YTPYTTFIRGEEESLSTVKWIL 286
Query: 329 QDLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT 383
+D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNHE DWP
Sbjct: 287 RDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQ 346
Query: 384 ------GSFYGNKDSGGECGVLAETMFYVPAEN 410
++ KDSGGECGV F +P +
Sbjct: 347 PWKPDWAAYVYGKDSGGECGVPYSVKFNMPGNS 379
|
|
| DICTYBASE|DDB_G0282559 dduA "N-terminal purple acid phosphatase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 107/383 (27%), Positives = 178/383 (46%)
Query: 238 TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY--P-GQNSLQ 294
T+G+ G I+T+ + L P+ MY Y VG + N IWSS + F + + P G+
Sbjct: 80 TIGF--DGKINTAVMSSLSPSTMYFYCVGDKSLN---IWSSIFNFTTNQFDAPFGKVIPF 134
Query: 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN------- 347
FGDMG E D N + + T LI + I I+ H+GDI YA+
Sbjct: 135 TTSFFGDMGWIEGDSLN-------SDVYTVDNLISRINEIQILHHVGDIAYADKQKPYNL 187
Query: 348 -GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV 406
G + W++F I P++S +PY+ GNH+R F + V +T + +
Sbjct: 188 PGNQTIWNKFQNSISPLSSHLPYLTCPGNHDR-------FI-------DLSVYTKT-WQM 232
Query: 407 PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQP--WLIFLAH 464
P + + WYS DY F +EHD+ + Q+ +IE+ L R+ P W++ +H
Sbjct: 233 PVDFESDSWYSYDYNGIHFVGFSSEHDYFPLSSQHTWIENDLKQY-RKSNPNGWIVMYSH 291
Query: 465 RVLGYSSGIF---YAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQN-I 520
R Y S ++ +D ++ + SL+ L KY VD+ I GH H+YERT P+++N I
Sbjct: 292 RPF-YCSVVWDWCSNIDVVESKKIYLWSLEDLLYKYNVDLFISGHAHSYERTLPVFKNKI 350
Query: 521 CTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLL 580
+ E K T++ + + + P Q + R GF L + + L
Sbjct: 351 MGDVESP--KATVHIVVGTGGDVEGEDMI-WQPSQQWTTGLRTSINGFGLLNVINSTTLN 407
Query: 581 FEYKKSSDGKVYDSFRISRDYRD 603
+++ + + + D F +++ D
Sbjct: 408 WQFVANINNTIIDEFNLTKGQFD 430
|
|
| DICTYBASE|DDB_G0268222 DDB_G0268222 "acid phosphatase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 116/436 (26%), Positives = 187/436 (42%)
Query: 188 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRG--SMCGAPARTVGWRDPG 245
+EM ++W + I +A VQ+ D + A T + G ++ G W+ G
Sbjct: 91 SEMMISWFTNGKIGDA--IVQFSESKSDLINYSANT---NNGVITVNGKSTTFSNWK--G 143
Query: 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKD 305
Y ++ L L P Y Y+ G +S+ I S F S +P + G K
Sbjct: 144 YSNSVVLTGLSPKTTYYYQCGG---SSSNILSQTNYFTTSNFPTTTTANTS---GKNVKS 197
Query: 306 EADGSNEYNDFQ---YASL-------NTTRQLIQDLKNIDIVFHIGDICYAN-GYISQ-- 352
+ + F YA + NT + + ++L ++ HIGDI YA+ + Q
Sbjct: 198 TTTDNFQVTPFTAAVYADMGYGGGYNNTVKVIEENLSKYSLILHIGDIAYADYNKVEQGN 257
Query: 353 ---WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 409
W F +EPI S VPYM A GNH+ FY + F +P
Sbjct: 258 QTIWTNFLQALEPITSKVPYMTAPGNHD-------VFYSFNSY--------QNTFNMPGS 302
Query: 410 NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQP--WLIFLAHRVL 467
+ WYS DY F TE D T+QY++I++ L + R+K P W+I AHR
Sbjct: 303 SNQP-WYSYDYNGVHFLSYSTESDLAPFTQQYQWIKNDLETY-RKKNPSGWVIAYAHRPY 360
Query: 468 GYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKN 527
S+ + + + + ++ +L+Q Y VDI + GH H YERT P+YQ +
Sbjct: 361 YCSTQMDWCRKQTL-RALIESTIGELFQNYNVDIYLAGHTHAYERTVPVYQQSPIGTYE- 418
Query: 528 YYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSS 587
Y GT++ TI P + WS R + G+ +L +++++L+++
Sbjct: 419 YPGGTVHFTIGTPGNQEGLDHNWILPAPS-WSASRFGELGYGQLNVVNNTHILWQFLTDQ 477
Query: 588 DGKVYDSFRISRDYRD 603
++D I + Y D
Sbjct: 478 Q-VIFDEQWIVKGYFD 492
|
|
| DICTYBASE|DDB_G0285351 DDB_G0285351 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 273 (101.2 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 105/399 (26%), Positives = 174/399 (43%)
Query: 230 SMCGAPARTVGWRDPGY---IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286
S+ + A T+ + G+ +T ++ L + +Y Y VG ++ N WS Y F +
Sbjct: 80 SITSSTAETIYYDTEGFHSFTYTGLIENLSQSMIYFYCVGDKVTNQ---WSQLYNFTSRS 136
Query: 287 YPGQNS------LQRVVI------FGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNI 334
NS + VI FGDMG + D N +D+ Y ++N + + L
Sbjct: 137 DISDNSDSGSGGIDNEVIPFTSSWFGDMGYIDGDSLN--SDW-Y-TINNLKSISNQLS-- 190
Query: 335 DIVFHIGDICYAN--------GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSF 386
V H+GDI YA+ G + W+ F + I I ST+PYM GNH+ SF
Sbjct: 191 -FVTHVGDIAYADYSKDSKYYGNETIWNNFLSSINSITSTLPYMTTPGNHD-------SF 242
Query: 387 YGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEH 446
G E ++T + +P E+ + WYS DY F +E + ++Q+ +IE+
Sbjct: 243 ------GDEFSAYSKT-WQMPTEHHSNNWYSFDYNGVHFISISSEDTYIPLSDQHSWIEN 295
Query: 447 CLASVDRQKQP--WLIFLAHRVLGYSSGIFYAVDGSFAEPMGR----ESLQKLWQKYKVD 500
L R P WLI +HR ++ + D E + +SL+ L KY VD
Sbjct: 296 DLKQY-RNSNPNGWLIMYSHRPFYCNAKFGWCNDDYKDEKTSKRLYIDSLEYLLYKYNVD 354
Query: 501 IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSL 560
+ I GH H YE + P+YQN ++ K T++ I + P T L
Sbjct: 355 LFISGHCHAYETSKPVYQNEVMGTYQDP-KATVHCVIGTGGNKGGQIEEWYEPKPWTNGL 413
Query: 561 YRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 599
+ G+ L + + L +++ + + + D F +++
Sbjct: 414 KSSLN-GYALLNIINSTTLNWKFIANLNNSIIDEFYLNK 451
|
|
| FB|FBgn0030245 CG1637 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 266 (98.7 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 103/374 (27%), Positives = 158/374 (42%)
Query: 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKD 305
+IH L++L PNA Y+Y G S + WS+ +QF+ P + + I+GDMG +
Sbjct: 108 FIHRVTLRDLEPNATYSYHCG-----SDFGWSAIFQFRTVPSASVDWSPSLAIYGDMGNE 162
Query: 306 EADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICY-ANGYISQ-WDQFTAQIEPI 363
A SL +Q Q D + H+GD Y N ++ D+F QIE +
Sbjct: 163 NAQ-----------SLARLQQETQR-GMYDAIIHVGDFAYDMNTKNARVGDEFMRQIETV 210
Query: 364 ASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMF 423
A+ +PYM+ GNHE + + N F +P F YS D G
Sbjct: 211 AAYLPYMVVPGNHEEKFN-----FSNY----------RARFSMPGGTENMF-YSFDLGPV 254
Query: 424 RFCVADTE--HDWREGTE----QYKFIEHCLASVD----RQKQPWLIFLAHRVLGYSSGI 473
F TE + G + Q++++ LA + R K+PW+I HR + Y S
Sbjct: 255 HFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKANLPENRNKRPWIILYGHRPM-YCSNE 313
Query: 474 FYAVDGSFAEPMGRES--------LQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN-- 523
D + +E + R L+ L ++ VD+AI+ H H+YER PIY N
Sbjct: 314 -NDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAIWAHEHSYERLWPIYDYKVRNGT 372
Query: 524 -KEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFE 582
K+ Y + I F WS + DYG+ +L A + +++ FE
Sbjct: 373 LKDSPYNDPSAPVHIVTGSAGCKEGREPFKGKIPEWSAFHSQDYGYTRLKAHNRTHIHFE 432
Query: 583 Y-KKSSDGKVYDSF 595
+G + D F
Sbjct: 433 QVSDDKNGAIIDDF 446
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LMX4 | PPA1_ARATH | No assigned EC number | 0.7732 | 0.9886 | 0.9983 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.X.830.1 | hypothetical protein (614 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 619 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-94 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 6e-23 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 4e-22 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 4e-16 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 2e-05 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 0.004 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 1e-94
Identities = 111/313 (35%), Positives = 158/313 (50%), Gaps = 30/313 (9%)
Query: 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ- 352
+ +FGDMG++ S NT L ++L N D + H+GD+ YA+GY +
Sbjct: 5 FKFAVFGDMGQN-----------TNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGS 53
Query: 353 -WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 411
WD F QIEP+AS VPYM+ GNHE D+ + + P+ +
Sbjct: 54 RWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFP-------RFRFPHSPSGST 106
Query: 412 AKFWYSTDYGMFRFCVADTEHDWR---EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLG 468
+ WYS D G F TE D+ G+ QY ++E LA VDR K PW+I + HR +
Sbjct: 107 SNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPM- 165
Query: 469 YSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNY 528
Y S + + R +L+ L+ KY VD+ + GHVH YERTCP+Y Y
Sbjct: 166 YCSNTDHDDCIEGEK--MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPY 223
Query: 529 YKGTLNGTIHVVAGGGGA--GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKS 586
G +H+V G GG GL F+ WS +R+ DYGF +LT + ++L FE+ ++
Sbjct: 224 SNP--KGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRN 281
Query: 587 SDGKVYDSFRISR 599
DG V DSF I +
Sbjct: 282 DDGVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 6e-23
Identities = 92/352 (26%), Positives = 156/352 (44%), Gaps = 54/352 (15%)
Query: 245 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP--YPGQNSLQRVVIFGDM 302
G I+ + L PN +Y YK G +ST E+ F+ P +P + + GD+
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGP--SST----QEFSFRTPPSKFP-----IKFAVSGDL 148
Query: 303 GKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 362
G E S ++ S + D+ GD+ YAN Y WD F ++P
Sbjct: 149 GTSEWTKST----LEHVSKW----------DYDVFILPGDLSYANFYQPLWDTFGRLVQP 194
Query: 363 IASTVPYMIASGNHERD-----WPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYS 417
+AS P+M+ GNHE + P + Y + M + + + + +YS
Sbjct: 195 LASQRPWMVTHGNHELEKIPILHPEKFTAYNAR----------WRMPFEESGSTSNLYYS 244
Query: 418 TDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 477
+ + + D+ G+EQY+++E+ L +DR+ PW++ + H Y+S A
Sbjct: 245 FNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSN--EAH 301
Query: 478 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTI 537
G +ES++ L K +VD+ GHVH YER +YQ T+K Y I
Sbjct: 302 QGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGK-TDKCGPVY-------I 353
Query: 538 HVVAGGGGAGLA-EFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSD 588
+ GG GLA ++ + SL+R+ +G +L D + + + + ++ D
Sbjct: 354 TIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDD 405
|
Length = 427 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 89.5 bits (223), Expect = 4e-22
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 534 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYD 593
+H+V G G GL F Q WS +RD DYG+ +LT + ++L +E+ +S DG V D
Sbjct: 1 KAPVHIVVGAAGNGLDPFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGTVLD 60
Query: 594 SF 595
SF
Sbjct: 61 SF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 76.3 bits (187), Expect = 4e-16
Identities = 36/218 (16%), Positives = 61/218 (27%), Gaps = 35/218 (16%)
Query: 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQ 352
R+++ GD+ L+ L++ L D+V +GD+ S
Sbjct: 1 RILVIGDLH------------GGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP-SL 47
Query: 353 WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRA 412
+ + P + GNH D+ S G
Sbjct: 48 EVLALLFALKLKAPGPVYLVRGNH--DFDSGNSELGFYL-------------ECAGLPYV 92
Query: 413 KFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSG 472
G + + G +F+E + I L H S
Sbjct: 93 LGNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHG--PLSPS 150
Query: 473 IFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 510
+ D G E+L+ L + VD+ + GH H
Sbjct: 151 LDSGDDI---YLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 63/321 (19%), Positives = 102/321 (31%), Gaps = 82/321 (25%)
Query: 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD 354
R + GD G Q A ++ + D + +GD Y +G S D
Sbjct: 2 RFLALGDWGGG-------GTAGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDD 53
Query: 355 -QFTAQIEPI----ASTVPYMIASGNHERDWPGTGSF---YGNKDSGGECGVLAETMFYV 406
+F E + + VP+ + GNH D+ G S Y + + + +
Sbjct: 54 PRFETTFEDVYSAPSLQVPWYLVLGNH--DYSGNVSAQIDYTKRPNS--------PRWTM 103
Query: 407 PAENRAKFWYSTDY---------------------GMFRFCVADTEHDWREGTEQYKFIE 445
PA ++Y + + + EQ ++E
Sbjct: 104 PA-----YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLE 158
Query: 446 HCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYG 505
LA+ W I + H + YSSG G + + L L +KYKVD + G
Sbjct: 159 KTLAAS---TADWKIVVGHHPI-YSSG----EHGPTSCL--VDRLLPLLKKYKVDAYLSG 208
Query: 506 HVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP---LQTTWSLYR 562
H HN + + K +GT VV+G G + +S +
Sbjct: 209 HDHNLQ----------------HIKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFT 252
Query: 563 DYDYGFVKLTAFDHSNLLFEY 583
GF L L +
Sbjct: 253 SSGGGFAYLE-LTKEELTVRF 272
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 37.7 bits (87), Expect = 0.004
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 325 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 377
+ + D V +GD+ +G + A + +P + GNH+
Sbjct: 18 EAALAAAEKPDFVLVLGDLVG-DGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 619 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.9 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.89 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.87 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.85 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.83 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.81 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.8 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.7 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.66 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.65 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.65 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.62 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.59 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.53 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.51 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.44 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.42 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.42 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.42 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.4 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.35 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.31 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.3 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.29 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.18 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.12 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.07 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.03 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.95 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.87 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.86 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.81 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.77 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.76 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.75 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.69 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.69 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.64 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.64 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.59 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.56 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.55 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.53 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.52 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.49 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.41 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.38 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.36 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.29 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.25 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.24 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.23 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.21 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.06 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.04 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 97.96 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.93 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.91 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.89 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.84 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.83 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.75 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.75 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.74 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.73 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.71 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.66 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.6 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.58 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.52 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.48 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.42 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.15 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.11 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.1 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.04 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.02 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.0 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.99 | |
| PHA02239 | 235 | putative protein phosphatase | 96.98 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.96 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 96.88 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.84 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.81 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.81 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 96.76 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.66 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.64 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.64 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.49 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.42 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.42 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.29 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 96.28 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.25 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.24 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.13 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.13 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.12 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.09 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 95.65 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 95.62 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.47 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.29 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 95.25 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.1 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 95.09 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 94.73 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.69 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.25 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 94.16 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.45 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 93.08 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 92.88 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 92.76 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 92.46 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 92.38 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 92.25 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 91.61 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 91.56 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 91.46 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 91.22 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 90.85 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 90.68 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 88.35 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 87.53 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 85.9 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 82.66 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 82.23 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 81.35 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 80.82 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=630.99 Aligned_cols=399 Identities=41% Similarity=0.719 Sum_probs=332.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccc-cCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHS-PAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~-~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.++|+|+||++++..++|+|+|.|.+. ....|+||...+..... +.+.. ..+|+.... +|+..|++|+|+
T Consensus 42 ~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~~ 112 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDAV 112 (452)
T ss_pred CCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeeee
Confidence 368999999999998899999999864 34899999765442211 11111 122333222 567899999999
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL 331 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~ 331 (619)
|++|+|+|+||||||++ ..||++++|+|+| +++.+.+|+++||||...... ++.....+.
T Consensus 113 ~~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~ 172 (452)
T KOG1378|consen 113 MKNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEEN 172 (452)
T ss_pred ecCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhcc
Confidence 99999999999999985 3499999999998 455689999999999875421 233344443
Q ss_pred CCCCEEEEcCcccccCCch-hHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC-
Q 007069 332 KNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE- 409 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~- 409 (619)
.++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |+.+|..||.||.+
T Consensus 173 ~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~ 241 (452)
T KOG1378|consen 173 LKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNS 241 (452)
T ss_pred cCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCc
Confidence 5799999999999999998 6999999999999999999999999999876543 55788999999954
Q ss_pred --CCCceEEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCcc-ccCCCCCCch
Q 007069 410 --NRAKFWYSTDYGMFRFCVADTEHDW--REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIF-YAVDGSFAEP 484 (619)
Q Consensus 410 --~~~~~~Ysfd~G~v~fi~Ldt~~~~--~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~-~~~~~~~~~~ 484 (619)
+..++|||||+|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |++... +..+|.. +.
T Consensus 242 s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~ 319 (452)
T KOG1378|consen 242 SESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ES 319 (452)
T ss_pred CCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hh
Confidence 3356999999999999999999985 356899999999999999887999999999999 766542 3445543 24
Q ss_pred hhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCC--CCCCCCCCCCcceee
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG--LAEFTPLQTTWSLYR 562 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~--l~~~~~~~~~ws~~~ 562 (619)
+ |..||+||.+|+||++|+||+|.|||+||++|.+|.......+..++.|||||++|.||+. +..+..++|+||+||
T Consensus 320 ~-~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R 398 (452)
T KOG1378|consen 320 M-REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFR 398 (452)
T ss_pred h-HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCcccccc
Confidence 4 7899999999999999999999999999999999987666555568999999999999954 566666899999999
Q ss_pred eCcccEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEeCCCCccccccCCCCC
Q 007069 563 DYDYGFVKLTAFDHSNLLFEYKKS--SDGKVYDSFRISRDYRDILACTVGSCPS 614 (619)
Q Consensus 563 ~~~~Gy~~l~v~n~~~l~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~~ 614 (619)
+.+|||++|+++|+|++.++++++ ..|+++|+|+|.|++.+...|....|.+
T Consensus 399 ~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~~ 452 (452)
T KOG1378|consen 399 EGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCIP 452 (452)
T ss_pred cccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccCC
Confidence 999999999999999999999985 3478999999999999999999988863
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-70 Score=591.56 Aligned_cols=378 Identities=25% Similarity=0.444 Sum_probs=309.9
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcc-eEEecCCcCCCCCccccccCCCeEEE
Q 007069 171 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 171 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
+++..|+|+||++++ +++|+|+|.|... ..+.|+||++++....++.++ .+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 578899999999997 8999999999864 458999999877655544433 445421 123 4799999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 329 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~ 329 (619)
|+|+||+|+|+|+||||.. .+|+.++|+|+|.. .++||+++||+|.... ...+++++.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 35889999998852 4699999999986421 1245666654
Q ss_pred hcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC
Q 007069 330 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 409 (619)
Q Consensus 330 ~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 409 (619)
.+||||||+||++|++++..+|++|++.++++.+.+|+|+++||||.+... ....+...+|..+|.||.+
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 689999999999999998899999999999999999999999999986321 0112233567789999953
Q ss_pred ---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhh
Q 007069 410 ---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 486 (619)
Q Consensus 410 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~ 486 (619)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+||++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2457899999999999999999988888999999999999998888999999999999 87754322111 11233
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCC---CCCCCCCCCcceeee
Q 007069 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL---AEFTPLQTTWSLYRD 563 (619)
Q Consensus 487 r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l---~~~~~~~~~ws~~~~ 563 (619)
|+.|++||++|+||++|+||+|.|||++|+|++++ .++||+||++|+||+.. ..+..++|+|++||.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~----------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc----------CCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 88999999999999999999999999999999876 34799999999999874 345667899999999
Q ss_pred CcccEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCCCCcccc
Q 007069 564 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDYRDILAC 607 (619)
Q Consensus 564 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~~~~~~~ 607 (619)
.+|||.+|++.|.++|++||+++.||+ +.|+|||+|-... -+|
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~ 425 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGC 425 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-Ccc
Confidence 999999999999999999999977774 8999999997544 344
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=397.29 Aligned_cols=282 Identities=39% Similarity=0.683 Sum_probs=223.7
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCch--hHHHHHHHhhhhhhcCCCe
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~vP~ 369 (619)
.++||+++||+|.... .+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~~-----------~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNTN-----------NSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCCC-----------CcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 4699999999997521 23567888877556899999999999988765 8999999999999999999
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeecc---CCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHH
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP---AENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKF 443 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~W 443 (619)
++++||||........+... ...++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA----------FFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc----------ccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999875432211100 00012222 223467899999999999999999765 567899999
Q ss_pred HHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceecc
Q 007069 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN 523 (619)
Q Consensus 444 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~ 523 (619)
|+++|+++++.+.||+||++|+|+ |++....... ..... .++.|++||++|+|+++|+||+|.|+|++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~-~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEK-MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHH-HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999987667799999999999 7765432211 01122 3889999999999999999999999999999999886
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCC--CCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007069 524 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPL--QTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 599 (619)
Q Consensus 524 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k 599 (619)
.......+++|++||++|+||+.++..... .++|++++..++||++|++.++++|+++++.+.+|+|+|+|+|.|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222367899999999999988654332 358999999999999999988889999999999999999999987
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=294.65 Aligned_cols=270 Identities=18% Similarity=0.256 Sum_probs=190.4
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCc----hhHHHHHH-Hhhhhhh--
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFT-AQIEPIA-- 364 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~-~~i~~l~-- 364 (619)
..++|+++||+|.+.. -|......+.++.++ .++|||+.+||+. .+|. ..+|++-+ +.+.+..
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3589999999996421 133333445555544 6899999999998 5553 45666533 3343333
Q ss_pred cCCCeEEccCCCccCCCCCCC--CCCCC----CCCC--cc--ccccceeeeccCCCCCceEEEE----Ee----------
Q 007069 365 STVPYMIASGNHERDWPGTGS--FYGNK----DSGG--EC--GVLAETMFYVPAENRAKFWYST----DY---------- 420 (619)
Q Consensus 365 ~~vP~~~v~GNHD~~~~~~~~--~y~~~----dsgg--e~--g~~~~~~f~~P~~~~~~~~Ysf----d~---------- 420 (619)
.++||++++||||+..+.... .|... +.-. +- ......||.||. .||++ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 478999999999986432211 01100 0000 00 001136899983 57754 21
Q ss_pred ---CCEEEEEEeCCCC-----CC-CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHH
Q 007069 421 ---GMFRFCVADTEHD-----WR-EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQ 491 (619)
Q Consensus 421 ---G~v~fi~Ldt~~~-----~~-~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 491 (619)
..+.||+|||... +. ....|++||+++|+.+ ++.++|+||++|||+ ||++.+.+ . ..+ ++.|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~hg~-~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSSKG-D----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCCCC-C----HHH-HHHHH
Confidence 1289999999632 11 2468999999999754 356789999999999 99875421 1 234 78999
Q ss_pred HHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEE
Q 007069 492 KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKL 571 (619)
Q Consensus 492 ~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l 571 (619)
|||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~ 302 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIH 302 (394)
T ss_pred HHHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEE
Confidence 99999999999999999999974 2478999999988765332 2346788888899999999
Q ss_pred EEecCCeEEEEEEECCCCcEEEEEEEEeCCCCc
Q 007069 572 TAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDI 604 (619)
Q Consensus 572 ~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~~ 604 (619)
++ +++.|+++|+.+.+|++++++++.|+.|..
T Consensus 303 ~l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~ 334 (394)
T PTZ00422 303 EL-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKL 334 (394)
T ss_pred EE-ecCEEEEEEEeCCCCcEEEEeeecccchhh
Confidence 98 889999999966899999999998876643
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-31 Score=271.44 Aligned_cols=247 Identities=24% Similarity=0.384 Sum_probs=175.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCch----hHHH-HHHHhhhhhhcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~----~~wd-~f~~~i~~l~~~vP 368 (619)
++|+++||+|..... .+......+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~~-------~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGTA-------GQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCCH-------HHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 489999999975211 122333445555554 6899999999999988742 3443 45555555556899
Q ss_pred eEEccCCCccCCCCCCC-CCCCCCCCCccccccceeeeccCCCCCceEEEEEeC------CEEEEEEeCCCCC-------
Q 007069 369 YMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG------MFRFCVADTEHDW------- 434 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G------~v~fi~Ldt~~~~------- 434 (619)
+|+++||||........ .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986321100 0000 0012334444 468999998 7999999998532
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecC
Q 007069 435 --------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 506 (619)
Q Consensus 435 --------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH 506 (619)
..+.+|++||+++|+++ ..+|+||++|+|+ |+..... . .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~~---~--~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEHG---P--TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCCC---C--cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13589999999999985 3389999999999 7654321 1 1223 88999999999999999999
Q ss_pred cccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCC---CCCCcceeeeCcccEEEEEEecCCeEEEEE
Q 007069 507 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP---LQTTWSLYRDYDYGFVKLTAFDHSNLLFEY 583 (619)
Q Consensus 507 ~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~ 583 (619)
+|.+++..+ ...++.||++|+||........ ..++|..++...+||+++++ ++++|+++|
T Consensus 210 ~H~~~~~~~----------------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKD----------------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeec----------------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 999998753 1258899999998876533321 23468888899999999999 678999999
Q ss_pred EECCCC
Q 007069 584 KKSSDG 589 (619)
Q Consensus 584 ~~~~dG 589 (619)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=236.87 Aligned_cols=241 Identities=17% Similarity=0.156 Sum_probs=162.3
Q ss_pred CceEEEEEeecCCCCCCCCCcc--cccccchHHHHHHHHHh----cCCCCEEEEcCcccccCCch----hHHHHHHHhhh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEY--NDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIE 361 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~--~~~~~~s~~~~~~i~~~----~~~pDfVl~~GDi~y~~g~~----~~wd~f~~~i~ 361 (619)
.+++|++++|+|.+..+..... ..| ......++++++. .++||||+++||+++..... .+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 3599999999999854322111 112 1122334444433 24899999999999765432 45667777777
Q ss_pred hhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC------C
Q 007069 362 PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW------R 435 (619)
Q Consensus 362 ~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~------~ 435 (619)
.+...+|+++++||||........ ...+|. ...+..||+|++|+++||+|||.... .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~~--------------~~~~f~---~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTEE--------------SIKDYR---DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCChh--------------HHHHHH---HHhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 666689999999999985321100 001111 01124578999999999999997542 1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCC-chhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 436 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA-EPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 436 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~-~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
...+|++||+++|+++.+.+.+|+||++|+|+ +...... .+..+. ....++.|.++|++++|+++|+||+|.+++..
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~-~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPDE-EDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCCC-CcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE
Confidence 24789999999999875446678999999999 6443211 111111 11237899999999999999999999987642
Q ss_pred ccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEE
Q 007069 515 PIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 584 (619)
Q Consensus 515 p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 584 (619)
.+++.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 223 ------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 223 ------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred ------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 14677888887776431 13479999999 6778899987
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=219.61 Aligned_cols=259 Identities=21% Similarity=0.317 Sum_probs=165.8
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHH-HHHHhhhhhhc---
Q 007069 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIAS--- 365 (619)
Q Consensus 290 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~--- 365 (619)
++..++|+++||+|.... |+ |......+..|.+ ..++||||.+||++|++|...+.| +|.+.++.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige-~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGE-KLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHH-hccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999995532 22 1222233444444 368999999999999999766665 45555555433
Q ss_pred -CCCeEEccCCCccCCCCCCC---CCCCCCCCCccccccceeeeccCCCCCceEEE------EEeCCEEEEEEeCCC---
Q 007069 366 -TVPYMIASGNHERDWPGTGS---FYGNKDSGGECGVLAETMFYVPAENRAKFWYS------TDYGMFRFCVADTEH--- 432 (619)
Q Consensus 366 -~vP~~~v~GNHD~~~~~~~~---~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ys------fd~G~v~fi~Ldt~~--- 432 (619)
+.|||.+.||||+..+-... .|... ..||..|.. ||. +..-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~~~----------d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLRKI----------DKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHHhh----------ccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 67999999999997532211 11111 234433310 110 001122333333221
Q ss_pred ----CCCC-------CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007069 433 ----DWRE-------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 501 (619)
Q Consensus 433 ----~~~~-------~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 501 (619)
+|+. ...|+.||+..|++ +.++|+||++|||+ .+.+. |+ .. .. .+++|.|+|+.++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~-HG---~T-~e-L~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGH-HG---PT-KE-LEKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhc-cC---Ch-HH-HHHHHHHHHHhcCCcE
Confidence 1211 25788999999998 68899999999998 66543 23 22 23 3899999999999999
Q ss_pred EEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcc----eeeeCcccEEEEEEecCC
Q 007069 502 AIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWS----LYRDYDYGFVKLTAFDHS 577 (619)
Q Consensus 502 vl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws----~~~~~~~Gy~~l~v~n~~ 577 (619)
+++||+|+.|..-- ..+++-|+++| ||++...-...+|.|. .|.-..-||..+++ .+.
T Consensus 247 Y~nGHDHcLQhis~----------------~e~~iqf~tSG-agSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHISS----------------PESGIQFVTSG-AGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhccC----------------CCCCeeEEeeC-CcccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 99999999998631 12344555555 4554322222333443 44445559999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEeC
Q 007069 578 NLLFEYKKSSDGKVYDSFRISRD 600 (619)
Q Consensus 578 ~l~~~~~~~~dG~v~D~f~i~k~ 600 (619)
.+++.|+ +..|+++.+....|.
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 799999998776554
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=204.73 Aligned_cols=229 Identities=15% Similarity=0.206 Sum_probs=151.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998753210000 01112334444432 2489999999999964 4456677777777765 79999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFIEH 446 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 446 (619)
.++||||.... ...++. ... ......+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-~~~~~~-------------~~~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-MRAVFP-------------ELP----PAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-HHHhhc-------------ccc----ccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 001110 000 01234578999999999999997532 235789999999
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceeccCC
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKE 525 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~ 525 (619)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999863 345888999998 5543211111 1111 277999999999 99999999999976543
Q ss_pred CccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecC
Q 007069 526 KNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDH 576 (619)
Q Consensus 526 ~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~ 576 (619)
.+|+.++++|+.|.... ..++...+....+||..+.++++
T Consensus 199 -------~~g~~~~~~gs~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFA----PDLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred -------ECCEEEEEcCcceeeec----CCCCcccccccCCCCcEEEEecC
Confidence 25788889998877542 22333444466789998887543
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.1e-22 Score=202.62 Aligned_cols=207 Identities=21% Similarity=0.266 Sum_probs=135.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~vP~ 369 (619)
|||++++|+|....+.... .+...+...++++++++ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 6999999999654321100 11122334455555442 469999999999954432 14555555555544 5899
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC----------------
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD---------------- 433 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---------------- 433 (619)
++++||||....... .+ . + +.....+..||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~~-~~-----------~----~-~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 77 HHVLGNHDLYNPSRE-YL-----------L----L-YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EEecCccccccccHh-hh-----------h----c-ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 999999998632210 00 0 0 1111234568999999999999999631
Q ss_pred ------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHH
Q 007069 434 ------------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQ 495 (619)
Q Consensus 434 ------------------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~ 495 (619)
...+.+|++||+++|++... +..++||++|+|+ +.... ..... .. .++.+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~--~~-~~~~~~~ll~ 212 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGL--LW-NHEEVLSILR 212 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Ccccc--cc-CHHHHHHHHH
Confidence 12357999999999998643 2345899999998 65432 11111 11 2678999999
Q ss_pred hc-CCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCC
Q 007069 496 KY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 546 (619)
Q Consensus 496 k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~ 546 (619)
++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 213 ~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 213 AYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred hCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhc
Confidence 95 89999999999987442 25788888886543
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-20 Score=205.69 Aligned_cols=312 Identities=17% Similarity=0.253 Sum_probs=148.7
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHH
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 323 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~ 323 (619)
..+.+++.++||+|+|+|+||+.... ....|..++|+|+|... ...+||++++|.+... +..+.
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~---~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDG---GGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEec---CCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 46899999999999999999999841 23347889999997533 3459999999997532 11456
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCc-----------------------hhH----HHHHH--HhhhhhhcCCCeEEccC
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------ISQ----WDQFT--AQIEPIASTVPYMIASG 374 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~-----------------------~~~----wd~f~--~~i~~l~~~vP~~~v~G 374 (619)
++++++. .+|||+||+||.+|+++. ... |..+. ..++.+.+++|++.++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999999852 111 22221 23456677999999999
Q ss_pred CCccCCCCCCCCCCCCC-CCCcc----ccccceee-eccC------CCCCceEEEEEeCC-EEEEEEeCCCCCC------
Q 007069 375 NHERDWPGTGSFYGNKD-SGGEC----GVLAETMF-YVPA------ENRAKFWYSTDYGM-FRFCVADTEHDWR------ 435 (619)
Q Consensus 375 NHD~~~~~~~~~y~~~d-sgge~----g~~~~~~f-~~P~------~~~~~~~Ysfd~G~-v~fi~Ldt~~~~~------ 435 (619)
+||+..+..+.--...+ ..+.. ...+...+ .+|. ......|++|.+|+ +.|++||+.....
T Consensus 203 DHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~ 282 (453)
T PF09423_consen 203 DHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDG 282 (453)
T ss_dssp STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCS
T ss_pred CceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccc
Confidence 99995322100000000 00000 00011111 1232 12356789999999 9999999985321
Q ss_pred ---------------CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccc-------cCCCCCCchhhHHHHHHH
Q 007069 436 ---------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFY-------AVDGSFAEPMGRESLQKL 493 (619)
Q Consensus 436 ---------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~-------~~~~~~~~~~~r~~l~~l 493 (619)
.|.+|.+||++.|++ +.++|+|++.-.|+ ....... ..+.--.-+..|++|..+
T Consensus 283 ~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~ 358 (453)
T PF09423_consen 283 PGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPAERQRLLDF 358 (453)
T ss_dssp SEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHHHHHHHHHH
T ss_pred cccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHHHHHHHHHH
Confidence 268999999999998 56899999988876 3221110 011000011238899999
Q ss_pred HHhcCCe--EEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCC---CC------CCCCCcceee
Q 007069 494 WQKYKVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAE---FT------PLQTTWSLYR 562 (619)
Q Consensus 494 l~k~~Vd--lvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~---~~------~~~~~ws~~~ 562 (619)
|.+.++. ++|+|.+|...-...-.+..-... ......+-+++++=.+.... .. ....++-.|.
T Consensus 359 l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~------~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~ 432 (453)
T PF09423_consen 359 LRESGIRNVVFLSGDVHASAASRIPPDDADPPD------GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFA 432 (453)
T ss_dssp HHHTT---EEEEE-SSSSEEEEEEESSTT---T------TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEE
T ss_pred HHhhCCCCEEEEecCcchheeeecccccccccC------CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEe
Confidence 9988875 889999999766542221100000 00012233444431111000 00 0112344454
Q ss_pred e-CcccEEEEEEecCCeEEEEE
Q 007069 563 D-YDYGFVKLTAFDHSNLLFEY 583 (619)
Q Consensus 563 ~-~~~Gy~~l~v~n~~~l~~~~ 583 (619)
+ ..+||+.|++ +...++.+|
T Consensus 433 ~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 433 DLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp E-B-EEEEEEEE-ETTEEEEEE
T ss_pred ECCCCcEEEEEE-ccceEEEEC
Confidence 4 6899999999 788988875
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=187.52 Aligned_cols=239 Identities=15% Similarity=0.183 Sum_probs=142.8
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----hcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCC
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~----~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v 367 (619)
..+||+.++|+|....... .... ......++++++ ...+|||||++||++. ++...+|+.+.+.++.+ .+
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~-~~~~--~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~~~l~~l--~~ 86 (275)
T PRK11148 13 ARVRILQITDTHLFADEHE-TLLG--VNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFAEGIAPL--RK 86 (275)
T ss_pred CCEEEEEEcCcccCCCCCC-ceec--cCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHHHHHhhc--CC
Confidence 4599999999997432111 1100 111233444443 2347999999999995 45566777777777665 68
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHH
Q 007069 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKF 443 (619)
Q Consensus 368 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~W 443 (619)
|+++++||||..... ..++ +.......++.+..++++||+|||.... ..+.+|++|
T Consensus 87 Pv~~v~GNHD~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~w 146 (275)
T PRK11148 87 PCVWLPGNHDFQPAM-YSAL-------------------QDAGISPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEW 146 (275)
T ss_pred cEEEeCCCCCChHHH-HHHH-------------------hhcCCCccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHH
Confidence 999999999974210 0000 0000111123344556999999997532 235899999
Q ss_pred HHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceec
Q 007069 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICT 522 (619)
Q Consensus 444 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~ 522 (619)
|+++|++. .+.+-+|+++|+|+ .....+... ... . ..++|.+++++| +|+++|+||+|.....
T Consensus 147 L~~~L~~~--~~~~~vv~~hH~P~-~~~~~~~d~-~~l--~-n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--------- 210 (275)
T PRK11148 147 LERKLADA--PERHTLVLLHHHPL-PAGCAWLDQ-HSL--R-NAHELAEVLAKFPNVKAILCGHIHQELDL--------- 210 (275)
T ss_pred HHHHHhhC--CCCCeEEEEcCCCC-CCCcchhhc-cCC--C-CHHHHHHHHhcCCCceEEEecccChHHhc---------
Confidence 99999986 23332444445565 322222111 111 1 267899999998 8999999999985432
Q ss_pred cCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEE
Q 007069 523 NKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 585 (619)
Q Consensus 523 ~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 585 (619)
..+|+.++++++.+..... ..... .+....+||..+++.+++.+..+.++
T Consensus 211 ---------~~~gi~~~~~ps~~~q~~~---~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 211 ---------DWNGRRLLATPSTCVQFKP---HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred ---------eECCEEEEEcCCCcCCcCC---CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 1257777777766654211 11111 11234468888888555566666554
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=184.51 Aligned_cols=195 Identities=16% Similarity=0.187 Sum_probs=122.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCC--------chhHHHHHHHhhhhhhc--
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIAS-- 365 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g--------~~~~wd~f~~~i~~l~~-- 365 (619)
|+.++|+|.+..... . .....+.+...+++ .+||+|+++||++.... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~-~----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-N----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-h----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 0 00000122233333 57999999999995431 24678888887765433
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC----------CC
Q 007069 366 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD----------WR 435 (619)
Q Consensus 366 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~ 435 (619)
..|++.++||||....... +. .. ..+.............++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998421110 00 00 011111111111111222333459999999999742 12
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeec
Q 007069 436 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCP 515 (619)
Q Consensus 436 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p 515 (619)
...+|++||+++|++. .+.+++||++|+|+ +..... . ....+ .+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~----~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP----S---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC----C---cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3589999999999975 34568999999998 543211 1 11113 399999999999999999999999666
Q ss_pred c
Q 007069 516 I 516 (619)
Q Consensus 516 ~ 516 (619)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 5
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-19 Score=188.41 Aligned_cols=247 Identities=21% Similarity=0.334 Sum_probs=165.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHH
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 323 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~ 323 (619)
..+.+++.++||+|++.|+||+... ..-|...+|+|+|.++. .++|+.+||..+.. |+.+-..+
T Consensus 97 ~dhtv~v~~~gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~--~i~~~~fa~ascQ~---------~~~gy~~a 160 (522)
T COG3540 97 LDHTVHVDLRGLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGR--AIRFVWFADASCQG---------WEIGYMTA 160 (522)
T ss_pred cCceEEEeccCCCCCceEEEEEeeC-----CccccccccccCCCCCC--cchhhhhhhccccc---------cccchhHH
Confidence 4688999999999999999999875 23478999999998765 47888888876543 33444567
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCchh-----------------------------HHHHHH--HhhhhhhcCCCeEEc
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGYIS-----------------------------QWDQFT--AQIEPIASTVPYMIA 372 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~~~-----------------------------~wd~f~--~~i~~l~~~vP~~~v 372 (619)
.+.|.+ .+|||+||.||.+|+.|-.. +|..++ +.++...+..|+++.
T Consensus 161 Y~~ma~--~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~ 238 (522)
T COG3540 161 YKTMAK--EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQ 238 (522)
T ss_pred HHHHHh--cCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEE
Confidence 777776 67999999999999976321 121111 123445568999999
Q ss_pred cCCCccCCCCCCCCCCCCCC-CCccc------cccceee-eccCC-----CCCceEEEEEeCC-EEEEEEeCCCCCC---
Q 007069 373 SGNHERDWPGTGSFYGNKDS-GGECG------VLAETMF-YVPAE-----NRAKFWYSTDYGM-FRFCVADTEHDWR--- 435 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~ds-gge~g------~~~~~~f-~~P~~-----~~~~~~Ysfd~G~-v~fi~Ldt~~~~~--- 435 (619)
+..||...+-...- ...|+ -.|.. .+++.++ .||-. .....|-+|.||+ ..|.+||+..+..
T Consensus 239 WDDHEv~NN~~~~~-~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp 317 (522)
T COG3540 239 WDDHEVANNWSNSI-DENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQP 317 (522)
T ss_pred eccccccccccccc-cccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccc
Confidence 99999864211000 00011 11110 0111111 35521 1357899999999 6799999986431
Q ss_pred -------------------CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCC-Cc-------cccCCCCCCchhhHH
Q 007069 436 -------------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSS-GI-------FYAVDGSFAEPMGRE 488 (619)
Q Consensus 436 -------------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss-~~-------~~~~~~~~~~~~~r~ 488 (619)
.|.+|.+||++.|.+ +++.|+|+..-.||.--. +. -...++.-.-+.+|+
T Consensus 318 ~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~Re 394 (522)
T COG3540 318 CGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRE 394 (522)
T ss_pred cCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHH
Confidence 268999999999998 789999998888772100 00 000111112345699
Q ss_pred HHHHHHHhcCCe--EEEecCccccee
Q 007069 489 SLQKLWQKYKVD--IAIYGHVHNYER 512 (619)
Q Consensus 489 ~l~~ll~k~~Vd--lvl~GH~H~YeR 512 (619)
.|...+.+.++. ++|+|.+|...-
T Consensus 395 rLl~fi~~~~~~N~V~LtgDvH~~wA 420 (522)
T COG3540 395 RLLRFIADRKIRNTVVLTGDVHYSWA 420 (522)
T ss_pred HHHHHHHhcCCCCcEEEechhHHHHH
Confidence 999999998876 899999997543
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-19 Score=175.40 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=112.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhh-cCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~-~~vP~~ 370 (619)
|||++++|+|..... ........++++++.. .+||+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 689999999975421 0111123445555543 579999999999965544678999998888876 679999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 450 (619)
+++||||.- +.+|+. ...+|++||++.|++
T Consensus 74 ~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~~ 103 (214)
T cd07399 74 VLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLKK 103 (214)
T ss_pred EECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHHH
Confidence 999999931 112221 247999999999998
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCC-CCCchhhHHHHHHHHHhc-CCeEEEecCcccceeee
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTC 514 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~ 514 (619)
. +..++|+++|+|+ +....+..... ......+++.|+++++++ +|+++|+||+|.+.+..
T Consensus 104 ~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 104 H---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 4 2345999999998 65543211110 000112366799999998 79999999999998875
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-16 Score=164.80 Aligned_cols=181 Identities=14% Similarity=0.152 Sum_probs=116.5
Q ss_pred HHHHHHHHhcCCCCEEEEcCcccccCCchh--------HHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCC
Q 007069 322 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSG 393 (619)
Q Consensus 322 ~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~--------~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsg 393 (619)
++++.+.+...+|||||++||+++...... .+..+++.++.....+|+++++||||....+.... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 455555554468999999999996653221 24556666777778999999999999864321110 0000
Q ss_pred Cccccccceeee--ccCC----CCCceEEEEE-eCCEEEEEEeCCCCCC-----------CCHHHHHHHHHHHhhccCCC
Q 007069 394 GECGVLAETMFY--VPAE----NRAKFWYSTD-YGMFRFCVADTEHDWR-----------EGTEQYKFIEHCLASVDRQK 455 (619)
Q Consensus 394 ge~g~~~~~~f~--~P~~----~~~~~~Ysfd-~G~v~fi~Ldt~~~~~-----------~~~~Q~~WL~~~L~~~~r~~ 455 (619)
..........|. +|.+ -....||+++ .++++||+|||..... ...+|++||+++|+++.+.+
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 000000011111 2211 1245688888 8999999999975321 24789999999999875333
Q ss_pred CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccceeee
Q 007069 456 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNYERTC 514 (619)
Q Consensus 456 ~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--Vdlvl~GH~H~YeRt~ 514 (619)
..++|++|+|+ +..... . . ...++.|.+++++|+ |.++|+||+|..+...
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 34788999998 443211 0 0 122789999999997 7889999999977653
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.6e-15 Score=147.85 Aligned_cols=166 Identities=14% Similarity=0.197 Sum_probs=102.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchh-HHHHHHHhhhhhh-cCCCeE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 370 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 370 (619)
.+||++++|+|....................+.++++. .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876431100001111223445555554 68999999999997655432 2344444445443 379999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 450 (619)
+++||||.. .....+|++||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCeEEEEeeccccCCCCc-cc------cC--CCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 451 VD--RQKQPWLIFLAHRVLGYSSGI-FY------AV--DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 451 ~~--r~~~pw~Iv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
.. +....+.+++.|+|+ ..... +. +. +.........+.+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 223456899999997 43321 11 00 1000011113344445566799999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-16 Score=148.89 Aligned_cols=198 Identities=19% Similarity=0.192 Sum_probs=100.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHH-HhhhhhhcCCCeEEc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 372 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~-~~i~~l~~~vP~~~v 372 (619)
+||+++||+|..... ... ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~-------~~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD-------DSD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH-------HCH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc-------hhH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 699999999986421 000 1122223322 378999999999997766554444322 223344568999999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccC-CCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
+||||+......... .............. ....+...........+..............+..|+...+...
T Consensus 72 ~GNHD~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (200)
T PF00149_consen 72 LGNHDYYSGNSFYGF-------YDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLL 144 (200)
T ss_dssp E-TTSSHHHHHHHHH-------HHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHH
T ss_pred ccccccceecccccc-------ccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccccc
Confidence 999998531100000 00000000000000 0000000112222222222222211112223333333322222
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 510 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Y 510 (619)
.+...+++||++|+|+ ++........ ......++.+..++++++|+++|+||+|.|
T Consensus 145 ~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 145 EAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2245678999999999 6554321100 001223789999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=154.63 Aligned_cols=162 Identities=19% Similarity=0.183 Sum_probs=103.3
Q ss_pred CCCCEEEEcCcccccCC--chhHHH----HHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeee
Q 007069 332 KNIDIVFHIGDICYANG--YISQWD----QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFY 405 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g--~~~~wd----~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 405 (619)
.+||+|+++||+++.+. ...+|. +|.+.+.++...+|++.++||||+.+.+... . ..-..|...|.
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~-------~~~~rf~~~Fg 115 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-L-------PVRQRFEKYFG 115 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-H-------HHHHHHHHHhC
Confidence 57999999999996432 124454 3444444433358999999999985422100 0 00011222331
Q ss_pred ccCCCCCceEEEEEeCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCC
Q 007069 406 VPAENRAKFWYSTDYGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS 480 (619)
Q Consensus 406 ~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~ 480 (619)
...|+|++|+++||+|||.... ....+|.+||++.|+... ...| +|++.|+|+ |....- .+|.
T Consensus 116 -------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~~--~cg~ 183 (257)
T cd08163 116 -------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPNT--SCGP 183 (257)
T ss_pred -------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCCC--CCCC
Confidence 2347899999999999997421 234679999999998642 2344 899999999 654321 1111
Q ss_pred CC--------------c-hhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 481 FA--------------E-PMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 481 ~~--------------~-~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
.. + .+..+.-..||++.++.+||+||+|.|=..
T Consensus 184 ~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 184 LRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 00 0 112355568888889999999999998654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.9e-15 Score=149.53 Aligned_cols=202 Identities=19% Similarity=0.248 Sum_probs=119.2
Q ss_pred EEEEeecCCCCC--CCCCcccccccchHHHHHHHHH---h-cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 296 VVIFGDMGKDEA--DGSNEYNDFQYASLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 296 f~v~GD~g~~~~--~~~~~~~~~~~~s~~~~~~i~~---~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
+.+++|+|.... .+.+. +.....+.++++.+ . .++||+|+++||+++. +...+....++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~---~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDV---FGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCcc---cCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCe
Confidence 368899997742 11112 22222334444433 2 2489999999999943 3333333444444433 3578
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCC----CC----------C
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH----DW----------R 435 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~----~~----------~ 435 (619)
++++||||+.......+.. . .. ...+.+. .-.++.++++.|++++... .+ .
T Consensus 75 ~~V~GNHD~~~~~~~~~~~-------~-l~-~~~~~~~------~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~ 139 (232)
T cd07393 75 VLLKGNHDYWWGSASKLRK-------A-LE-ESRLALL------FNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEE 139 (232)
T ss_pred EEEeCCccccCCCHHHHHH-------H-HH-hcCeEEe------ccCcEEECCEEEEEEEeeCCCCCccccccccccchh
Confidence 9999999973211000000 0 00 0000000 0134567889999876311 11 0
Q ss_pred ---CCHHHHHHHHHHHhhccCCC-CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 436 ---EGTEQYKFIEHCLASVDRQK-QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 436 ---~~~~Q~~WL~~~L~~~~r~~-~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
...+|++||++.|+++.... ..++|++.|+|+ +.... ..+.+..++++++|+++|+||+|.++
T Consensus 140 ~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~~ 206 (232)
T cd07393 140 DEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGVG 206 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCCc
Confidence 02568999999999864222 246999999998 54421 13467889999999999999999999
Q ss_pred eeeccccceeccCCCccccCCCCceEEEEeCCC
Q 007069 512 RTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGG 544 (619)
Q Consensus 512 Rt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~g 544 (619)
+..|+... .+|+.|+++.++
T Consensus 207 ~~~~~~~~-------------~~gi~~~~~~~~ 226 (232)
T cd07393 207 RDRAINGE-------------RGGIRYQLVSAD 226 (232)
T ss_pred ccccccce-------------ECCEEEEEEcch
Confidence 98876432 256777776653
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-13 Score=148.37 Aligned_cols=99 Identities=20% Similarity=0.182 Sum_probs=72.4
Q ss_pred CceEEEEE-eCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCC-CCch
Q 007069 412 AKFWYSTD-YGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS-FAEP 484 (619)
Q Consensus 412 ~~~~Ysfd-~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~-~~~~ 484 (619)
+..||+|+ .+++|||+|||.... ....+|++||+++|++. +.+++||++|||+ ++........-. -...
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~~ 365 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEKR 365 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-ccccccccccccccccc
Confidence 56799999 899999999997531 23589999999999973 4467999999998 665321110000 0001
Q ss_pred hhHHHHHHHHHhc-CCeEEEecCcccceeee
Q 007069 485 MGRESLQKLWQKY-KVDIAIYGHVHNYERTC 514 (619)
Q Consensus 485 ~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~ 514 (619)
...++|.++|++| +|.++|+||.|....+.
T Consensus 366 ~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~ 396 (496)
T TIGR03767 366 HLGTELVSLLLEHPNVLAWVNGHTHSNKITA 396 (496)
T ss_pred cCHHHHHHHHhcCCCceEEEECCcCCCcccc
Confidence 1257899999998 89999999999876553
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-14 Score=115.00 Aligned_cols=62 Identities=37% Similarity=0.777 Sum_probs=42.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007069 534 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSF 595 (619)
Q Consensus 534 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f 595 (619)
++|||||+|+||+.++++..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888899999999999999999998999999999999999999998
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.6e-13 Score=129.62 Aligned_cols=168 Identities=15% Similarity=0.185 Sum_probs=101.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCC
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 375 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 375 (619)
++++||+|.+.. .... ..++ ..++|+|+++||+++.. .......+ +.++. ..+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~~-~~~~~~~~-~~l~~--~~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNFG-GKEAAVEI-NLLLA--IGVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCcC-CHHHHHHH-HHHHh--cCCCEEEEcCC
Confidence 578999996521 1111 2222 26899999999999543 33333333 33333 26899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHHh
Q 007069 376 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------WREGTEQYKFIEHCLA 449 (619)
Q Consensus 376 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------~~~~~~Q~~WL~~~L~ 449 (619)
||...... .. . . ..+.+ .+ ..+.+++++|+++++... .....+|++|+ +.|+
T Consensus 62 HD~~~~~~--~~---~---~------~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEILG--LL---T---S------AGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHHHH--hh---h---c------CcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 99642100 00 0 0 00111 11 235678899999987432 12346889998 4444
Q ss_pred hccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 450 SVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 450 ~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
. .+.+.+|++.|+|+ +.... ..... ....+.+.+..++++++++++|+||+|.-.
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~~~--d~~~~-~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGTAV--DRVSG-GFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred c---cCCCCeEEEECCCC-cCCcc--cccCC-CCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 23345899999998 65311 11000 011246789999999999999999999854
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-12 Score=129.82 Aligned_cols=185 Identities=20% Similarity=0.237 Sum_probs=103.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
||++++|+|.... .+ .+ ...++++++.. .++|+|+++||++... .+..++++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~---~~--~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF---DT--EEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC---CH--HHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 11 12233333321 5799999999999532 2223455544442 46899999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC-------------------
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------------------- 433 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------------------- 433 (619)
+||||+........+ ...+. + ....+.++.+..++++|++++.-.+
T Consensus 68 ~GNHD~~~~~~~~~~-------------~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLTYEEI-------------ESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCCHHHH-------------Hhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 999997421110000 00000 0 0001122223335677777762111
Q ss_pred -------CC-----CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCC-CC---CchhhHHHHHHHHHhc
Q 007069 434 -------WR-----EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SF---AEPMGRESLQKLWQKY 497 (619)
Q Consensus 434 -------~~-----~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~-~~---~~~~~r~~l~~ll~k~ 497 (619)
.. ...+|++||++.|++.. ..+ +|++.|+|+ .......+.+. .+ ....+.+.|+++++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 10 12678999999998752 334 888889987 33110000000 00 0112357899999999
Q ss_pred CCeEEEecCcccce
Q 007069 498 KVDIAIYGHVHNYE 511 (619)
Q Consensus 498 ~Vdlvl~GH~H~Ye 511 (619)
+|+++|+||.|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999864
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=130.12 Aligned_cols=198 Identities=17% Similarity=0.170 Sum_probs=110.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 01123333332 257999999999996544322 345556666666799999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
++||||+......... + ......+.+ ..+.+..++.++..+.++--... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~----L~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITV----LRNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEE----eecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 000001111 01223445556544443321111 12335666777664
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccce--eccC---CC
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI--CTNK---EK 526 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~--~~~~---~~ 526 (619)
.+..+.|++.|.|. + .+. +.+.++|++++||+|..|...|..... |... ..
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~ 187 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDY 187 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEeccccccccchhhcCcccc
Confidence 34456899999985 1 111 156799999999999999887765432 1111 11
Q ss_pred ccccCCCCceEEEEeCCCCC
Q 007069 527 NYYKGTLNGTIHVVAGGGGA 546 (619)
Q Consensus 527 ~~y~~~~~g~vyiv~G~gG~ 546 (619)
..|. ..+..+||..|.|..
T Consensus 188 G~~~-~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 188 GLYR-KGGSQLYVSRGLGTW 206 (223)
T ss_pred eEEE-ECCEEEEEcCCccCC
Confidence 1121 234567777776543
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-12 Score=120.19 Aligned_cols=125 Identities=18% Similarity=0.289 Sum_probs=84.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcC-CCeEEc
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 372 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~-vP~~~v 372 (619)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999875421110 0011112223322 2579999999999964 4456777777777766543 699999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 452 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 452 (619)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999992
Q ss_pred CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 453 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 453 r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
|+++|+|+ +..... .... . ..++.+.+++++++++++++||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~-~~~~-~---~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS-GRER-L---LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc-cccc-C---CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899998 544221 1111 1 13678999999999999999999997644
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.7e-12 Score=131.06 Aligned_cols=184 Identities=19% Similarity=0.265 Sum_probs=116.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+||+.++|.|..... ......+.+++++. .+||+|+++||+++. |...+++...+.++.+....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999987310 01223444444443 578999999999965 777777777777775555789999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEe-CCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHDW----REGTEQYKFIEH 446 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 446 (619)
+|||||....+...+ ...+.. ....+-.... ++++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~~--------------~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEAF--------------SDQFFN----RYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHHh--------------hhhhcc----cCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 999999864322110 000100 0011111122 67899999998653 346899999999
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccc
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNY 510 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--Vdlvl~GH~H~Y 510 (619)
.|++........+|+++|+|+ .......... .......+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~----~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRV----ALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCcccee----eeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221124677777776 4332221111 1111456777888887 999999999986
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-11 Score=132.35 Aligned_cols=97 Identities=21% Similarity=0.223 Sum_probs=66.8
Q ss_pred CceEEEEE-eCCE--EEEEEeCCCCC-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCc----
Q 007069 412 AKFWYSTD-YGMF--RFCVADTEHDW-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI---- 473 (619)
Q Consensus 412 ~~~~Ysfd-~G~v--~fi~Ldt~~~~-----------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~---- 473 (619)
+..||+|+ .|++ |||+||+.... ....+|++||+++|+.+. .+.|++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5845 99999987521 135899999999999874 36688898899887 54221
Q ss_pred -ccc-C-C--CCCCchhhHHHHHHHHHhc-CCeEEEecCcccc
Q 007069 474 -FYA-V-D--GSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNY 510 (619)
Q Consensus 474 -~~~-~-~--~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~Y 510 (619)
|.. . . ....+...-.+|..+|++| +|.++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 110 0 0 0011111124899999998 7999999999964
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.5e-11 Score=119.45 Aligned_cols=174 Identities=14% Similarity=0.189 Sum_probs=103.1
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++......++..+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 4689999999954 23344444432 57999999999996542344444555554433 57999
Q ss_pred EccCCCccCCCCC-CCCCCCCCCCCccccccceeeeccC-CCCCceEEEEEe-CCEEEEEEeCCCCC--CCCHHHH----
Q 007069 371 IASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDY-GMFRFCVADTEHDW--REGTEQY---- 441 (619)
Q Consensus 371 ~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~-G~v~fi~Ldt~~~~--~~~~~Q~---- 441 (619)
+++||||..-... ...|.. .-..|. -.....+ ..+ |+++|+.++..... ...++|.
T Consensus 67 ~V~GNhD~~v~~~l~~~~~~-------------~~~~p~~~~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~ 131 (224)
T cd07388 67 YVPGPQDAPLWEYLREAYNA-------------ELVHPEIRNVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYP 131 (224)
T ss_pred EEcCCCChHHHHHHHHHhcc-------------cccCccceecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhh
Confidence 9999999630000 000000 000010 0011112 344 66999999866432 2234442
Q ss_pred HHHHH-HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007069 442 KFIEH-CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 508 (619)
Q Consensus 442 ~WL~~-~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H 508 (619)
.||.+ .|+...+...+..|++.|+|+ |..+. ...+.+.+..++++++..++++||.|
T Consensus 132 ~~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 222221123345899999999 76631 12346799999999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-11 Score=117.96 Aligned_cols=150 Identities=17% Similarity=0.189 Sum_probs=85.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCC
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 375 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 375 (619)
|++++|+|.+.... ...+.+.+ ...++|+|+++||+++... ..++.. ..+......|++.++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~-~~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFP-IAPDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccC-CCCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 00111111 1268999999999996432 222222 22233457899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007069 376 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQK 455 (619)
Q Consensus 376 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~ 455 (619)
||+.. +|. ....||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~-----G~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII-----GTTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE-----eeecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 00123332211 1245555555544
Q ss_pred CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 456 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 456 ~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
+.+|+++|+|+ +.................++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23899999998 6543211111111111225668888889999999999999864
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.2e-11 Score=123.73 Aligned_cols=170 Identities=16% Similarity=0.185 Sum_probs=95.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
.++|+++++|+|.+... + ...++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 35999999999976321 1 1223333322 26899999999999622 223445666777777667899
Q ss_pred EEccCCCccCCCCCC-CCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHH
Q 007069 370 MIASGNHERDWPGTG-SFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGM--FRFCVADTEHDWREGTEQYKFIEH 446 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q~~WL~~ 446 (619)
++++||||+...... ..+. ..-.+.| +.+ ..+....+..++ +.++.++... . +... ..+
T Consensus 116 ~~V~GNHD~~~~~~~~~~~~--~~l~~~g------i~l----L~n~~~~i~~~~~~i~i~G~~d~~--~-~~~~---~~~ 177 (271)
T PRK11340 116 FACFGNHDRPVGTEKNHLIG--ETLKSAG------ITV----LFNQATVIATPNRQFELVGTGDLW--A-GQCK---PPP 177 (271)
T ss_pred EEecCCCCcccCccchHHHH--HHHHhcC------cEE----eeCCeEEEeeCCcEEEEEEecchh--c-cCCC---hhH
Confidence 999999997421100 0000 0000001 111 112334455443 5566665321 1 1111 111
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeecccc
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 518 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~ 518 (619)
.++ ++. ..|++.|.|- + . +.+.+.++||+|+||+|.-|-..|..+
T Consensus 178 ~~~----~~~-~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 178 ASE----ANL-PRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred hcC----CCC-CeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEccccC
Confidence 222 233 4889999994 1 0 122467899999999999998877643
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.3e-11 Score=121.07 Aligned_cols=198 Identities=12% Similarity=0.097 Sum_probs=108.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC-chhHHHHHHHhhhhhh-cCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 370 (619)
||++++|+|.+.......-.........+++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999875421110000011123455555543 258999999999996543 2334556666666654 479999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeec--cCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV--PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCL 448 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~--P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L 448 (619)
+++||||....... +... ......... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSPL-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCcccccc--ccch-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 99999998642211 1000 000000000 0000112223345556888888764321 1123444555555
Q ss_pred hhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 449 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 449 ~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
.+. .+....|++.|.|+ ...... .. .. .......+...++|++++||.|..+..
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCeee
Confidence 543 34556999999997 333211 00 00 122344556788999999999997653
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-09 Score=110.43 Aligned_cols=88 Identities=14% Similarity=0.284 Sum_probs=58.4
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccc--------cchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQ--------YASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 362 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~--------~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 362 (619)
+..||++.++|||.+...++.-.+.++ ....+-++++++. ++||||+++||+++.......-..+++.+.|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~s-E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLAS-EKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhc-cCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 456999999999997642221111111 1123456677764 8999999999999764322111235556666
Q ss_pred -hhcCCCeEEccCCCccC
Q 007069 363 -IASTVPYMIASGNHERD 379 (619)
Q Consensus 363 -l~~~vP~~~v~GNHD~~ 379 (619)
+..++||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 45699999999999965
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.12 E-value=9.7e-10 Score=102.97 Aligned_cols=153 Identities=18% Similarity=0.310 Sum_probs=90.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+||+++||+|... ..++++++...++|+|+++||++.. .++++.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 5899999999752 2244555554679999999999852 4555555554 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 007069 374 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDR 453 (619)
Q Consensus 374 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r 453 (619)
||||... + ..... ... +.+.+. .
T Consensus 55 GNHD~~~------~-------------~~~~~------~~~-----------------------------~~~~~~---~ 77 (156)
T PF12850_consen 55 GNHDNWA------F-------------PNEND------EEY-----------------------------LLDALR---L 77 (156)
T ss_dssp -CCHSTH------H-------------HSEEC------TCS-----------------------------SHSEEE---E
T ss_pred CCccccc------c-------------hhhhh------ccc-----------------------------ccccee---e
Confidence 9999531 0 00000 000 000000 0
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCC
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTL 533 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 533 (619)
.-..+.|++.|.+. +... . ..+.+..++...+++++++||.|..+... .
T Consensus 78 ~~~~~~i~~~H~~~-~~~~-----------~-~~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------~ 126 (156)
T PF12850_consen 78 TIDGFKILLSHGHP-YDVQ-----------W-DPAELREILSRENVDLVLHGHTHRPQVFK------------------I 126 (156)
T ss_dssp EETTEEEEEESSTS-SSST-----------T-THHHHHHHHHHTTSSEEEESSSSSEEEEE------------------E
T ss_pred eecCCeEEEECCCC-cccc-----------c-ChhhhhhhhcccCCCEEEcCCcccceEEE------------------E
Confidence 11245788888776 4321 1 14467788889999999999999977653 2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEE
Q 007069 534 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTA 573 (619)
Q Consensus 534 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 573 (619)
+++.++..|+-+... . ...-+|+.+++
T Consensus 127 ~~~~~~~~Gs~~~~~--~-----------~~~~~~~i~~~ 153 (156)
T PF12850_consen 127 GGIHVINPGSIGGPR--H-----------GDQSGYAILDI 153 (156)
T ss_dssp TTEEEEEE-GSSS-S--S-----------SSSEEEEEEEE
T ss_pred CCEEEEECCcCCCCC--C-----------CCCCEEEEEEE
Confidence 467778888765431 1 11457888887
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-09 Score=96.59 Aligned_cols=96 Identities=29% Similarity=0.423 Sum_probs=69.5
Q ss_pred cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCC
Q 007069 331 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAEN 410 (619)
Q Consensus 331 ~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~ 410 (619)
..++|+|+++||+++.... ..+..+...........|++.++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 3789999999999975543 333333323333456899999999999
Q ss_pred CCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHH
Q 007069 411 RAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESL 490 (619)
Q Consensus 411 ~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 490 (619)
|++.|.|+ +........ . ... .++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~~-~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELSP-D--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhcc-c--chh-hHHHH
Confidence 88999998 544322111 1 011 26788
Q ss_pred HHHHHhcCCeEEEecCcccceeee
Q 007069 491 QKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 491 ~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
..++.+++++++|+||.|.+.+..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999999875
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-09 Score=111.34 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=56.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
...++++.++|+|.... .......+.++.+ ..||+|+.+||+++. .....+....+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34689999999998742 1122334444444 567999999999964 22344567777788888899999
Q ss_pred EccCCCccCC
Q 007069 371 IASGNHERDW 380 (619)
Q Consensus 371 ~v~GNHD~~~ 380 (619)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.2e-08 Score=94.29 Aligned_cols=59 Identities=15% Similarity=0.418 Sum_probs=42.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccC
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 374 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 374 (619)
|++++||+|... ..++++++...++|.|+++||+++.... .. +....|++.+.|
T Consensus 1 ~i~~isD~H~~~---------------~~~~~~~~~~~~~d~ii~~GD~~~~~~~-~~----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGSL---------------ELLEKALELFGDVDLIIHAGDVLYPGPL-NE----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCCH---------------HHHHHHHHHhcCCCEEEECCcccccccc-ch----------hhcCCcEEEEeC
Confidence 589999999541 3455666655559999999999954322 11 234679999999
Q ss_pred CCccC
Q 007069 375 NHERD 379 (619)
Q Consensus 375 NHD~~ 379 (619)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99963
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.2e-08 Score=92.35 Aligned_cols=117 Identities=20% Similarity=0.346 Sum_probs=76.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccC
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 374 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 374 (619)
||+++||+|.... .+ ...++|+|+++||+++. +...+++.+.+.++.+. ..+++.++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999996521 11 22679999999999953 44444555555555442 223578999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCC
Q 007069 375 NHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQ 454 (619)
Q Consensus 375 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~ 454 (619)
|||... . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--- 66 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--- 66 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C---
Confidence 999620 0 1
Q ss_pred CCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 455 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 455 ~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
+ .+.|++.|.|+ +..... ... ....+.+.+..++++++++++++||+|...
T Consensus 67 ~-~~~ilv~H~~p-~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 E-DTDILVTHGPP-YGHLDL-VSS---GQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred C-CCEEEEECCCC-CcCccc-ccc---CcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 1 23688899998 765321 100 011224577888899999999999999964
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.5e-08 Score=97.24 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+|.... . ... +.++. .+||+|+++||++... .+..+.++.+ ..|++.++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23333 5799999999998421 1233333332 47999999
Q ss_pred CCCccCC
Q 007069 374 GNHERDW 380 (619)
Q Consensus 374 GNHD~~~ 380 (619)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.6e-08 Score=98.60 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=34.7
Q ss_pred CCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhh---cCCCeEEccCCCccC
Q 007069 332 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIASGNHERD 379 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~---~~vP~~~v~GNHD~~ 379 (619)
.+||+|+++||+++.+.. ..+|.+.++.+.++. ..+|++.++||||..
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 579999999999976543 234554444444443 368999999999985
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-06 Score=85.39 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=97.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccC
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 374 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 374 (619)
+++++||+|...... .....+.+++++ .++|.|+|+||+++ . +..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 478999999654211 112345555554 57999999999984 1 222333332 247899999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCC
Q 007069 375 NHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQ 454 (619)
Q Consensus 375 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~ 454 (619)
|||..+ .+|.. ..++.++
T Consensus 61 N~D~~~------------------------~lp~~------~~~~~~g-------------------------------- 78 (178)
T cd07394 61 DFDENL------------------------NYPET------KVITVGQ-------------------------------- 78 (178)
T ss_pred CCCccc------------------------cCCCc------EEEEECC--------------------------------
Confidence 999631 11210 1223222
Q ss_pred CCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCC
Q 007069 455 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLN 534 (619)
Q Consensus 455 ~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~ 534 (619)
++|.+.|--. +... . . .+.+..++++.++|++++||+|...... .+
T Consensus 79 ---~~i~l~HG~~-~~~~------~---~---~~~~~~~~~~~~~dvii~GHTH~p~~~~------------------~~ 124 (178)
T cd07394 79 ---FKIGLIHGHQ-VVPW------G---D---PDSLAALQRQLDVDILISGHTHKFEAFE------------------HE 124 (178)
T ss_pred ---EEEEEEECCc-CCCC------C---C---HHHHHHHHHhcCCCEEEECCCCcceEEE------------------EC
Confidence 3556666422 2110 0 0 3355566677899999999999754332 14
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc
Q 007069 535 GTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK 590 (619)
Q Consensus 535 g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~ 590 (619)
+..++..|+.|....+. . ......|+++++ +...+.++++.=.+++
T Consensus 125 g~~viNPGSv~~~~~~~-----~----~~~~~syail~~-~~~~~~~~~~~l~~~~ 170 (178)
T cd07394 125 GKFFINPGSATGAFSPL-----D----PNVIPSFVLMDI-QGSKVVTYVYQLIDGE 170 (178)
T ss_pred CEEEEECCCCCCCCCCC-----C----CCCCCeEEEEEe-cCCeEEEEEEEEECCc
Confidence 67778888876432110 0 011236788887 5667777777534443
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-07 Score=87.26 Aligned_cols=63 Identities=17% Similarity=0.318 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+|.... ..+.+.++++...++|.|+++||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 47999999995421 12334455554348999999999981 1233333332 45899999
Q ss_pred CCCcc
Q 007069 374 GNHER 378 (619)
Q Consensus 374 GNHD~ 378 (619)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.7e-08 Score=99.99 Aligned_cols=182 Identities=18% Similarity=0.235 Sum_probs=96.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-hcCCCCEEEEcCcccccC-Cc---hhHHHHHHHhhhhhhcC-C
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-DLKNIDIVFHIGDICYAN-GY---ISQWDQFTAQIEPIAST-V 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~-~~~~pDfVl~~GDi~y~~-g~---~~~wd~f~~~i~~l~~~-v 367 (619)
.|+++++|+|.+... +.....+.+.++ ...++|+|+++||+++.- |. ........+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 378999999986421 111222323222 235799999999999531 11 12223455556666544 8
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 007069 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHC 447 (619)
Q Consensus 368 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 447 (619)
|++.+.||||..... .+. .++|. .. +|. ...++.++.++++.-.... ......|+++++.
T Consensus 72 ~v~~v~GNHD~~~~~--~~~------~~~g~---~~--l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLGK--RFA------KAAGM---TL--LPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhhH--HHH------HhCCC---EE--eCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHH
Confidence 999999999974211 110 01111 01 111 1346677777766643322 1233556666555
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCcc------------cc-CCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIF------------YA-VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~------------~~-~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
+.. ||...+.|.++ +..... .. ....+... ..+.+.+++++++++++++||+|.-..
T Consensus 132 ~r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDV-NPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCC-CHHHHHHHHHHhCCCEEEECcccCcce
Confidence 543 23333344433 211000 00 00011111 145788899999999999999998654
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.5e-06 Score=85.37 Aligned_cols=176 Identities=19% Similarity=0.294 Sum_probs=100.4
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHh--hhhhh-cCCC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQ--IEPIA-STVP 368 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~--i~~l~-~~vP 368 (619)
.+|++++.|.|.... +...+..+.++ .++|+++.+||++|.. +... .-.+. ++.+. ..+|
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~---~~~~~~~~e~l~~~~~~ 66 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKE---VAEELNKLEALKELGIP 66 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchH---HHHhhhHHHHHHhcCCe
Confidence 479999999986531 12223333332 4799999999999432 1111 11111 34444 4899
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC--CCC----CCC-HHHH
Q 007069 369 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDW----REG-TEQY 441 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~----~~~-~~Q~ 441 (619)
+++++||-|-..- .+... .+ ++. + .+ -+.+.|++.|+.+--. ..| .-. .+-+
T Consensus 67 v~avpGNcD~~~v--~~~l~--~~----~~~------v-----~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 67 VLAVPGNCDPPEV--IDVLK--NA----GVN------V-----HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred EEEEcCCCChHHH--HHHHH--hc----ccc------c-----cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 9999999874210 00000 00 000 0 01 3466777777774221 111 112 3334
Q ss_pred HHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 442 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 442 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
.-++.-+.+.+ .+-.|++.|.|+ |..... ...+ ....|.+.+..++++.++-+.++||.|-+.-
T Consensus 126 s~l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 126 SKLKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred HHHHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 45555555542 222399999999 876432 1111 1355688999999999999999999998543
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.9e-07 Score=88.50 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=38.7
Q ss_pred HHHHHHHhcCCCCEEEEcCcccccCC--chhHHHHHHHhhhhhhc---CCCeEEccCCCccC
Q 007069 323 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIASGNHERD 379 (619)
Q Consensus 323 ~~~~i~~~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l~~---~vP~~~v~GNHD~~ 379 (619)
.++++++. .+||+|+++||++.... ...+|.++...+..+.+ .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34455554 58999999999996532 23456565555544432 58999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.4e-07 Score=92.28 Aligned_cols=181 Identities=19% Similarity=0.264 Sum_probs=89.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHH-------------------
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 354 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd------------------- 354 (619)
=++++++|.+... ..++.+..++.+ .+||+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 4789999986431 234445555555 48999999999997666666666
Q ss_pred -------HHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC-CCCceEEEEEeCCEEEE
Q 007069 355 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE-NRAKFWYSTDYGMFRFC 426 (619)
Q Consensus 355 -------~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~~Ysfd~G~v~fi 426 (619)
.|++.+..+ .+|.+++|||||-.- . -|+. .++....-.|.- .--.. +.+--|..-|+
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~--~-~~lr---------~a~~~e~v~p~~~~vH~s-f~~~~g~y~v~ 137 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE--R-FFLR---------EAYNAEIVTPHIHNVHES-FFFWKGEYLVA 137 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH--H-HHHH---------HHHHCCCC-TTEEE-CTC-EEEETTTEEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH--H-HHHH---------HHhccceeccceeeeeee-ecccCCcEEEE
Confidence 666666543 799999999999521 0 0000 001100001100 00001 22333456677
Q ss_pred EEeCCCC---CCC------CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc
Q 007069 427 VADTEHD---WRE------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY 497 (619)
Q Consensus 427 ~Ldt~~~---~~~------~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~ 497 (619)
.+-.+-. ... -....+|..+.|.++ +..-+|++.|.|+-+.. + ....|.+.+..++++|
T Consensus 138 G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~k-------g--~~h~GS~~V~dlIk~~ 205 (255)
T PF14582_consen 138 GMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHK-------G--LIHVGSAAVRDLIKTY 205 (255)
T ss_dssp EE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCT-------C--TBTTSBHHHHHHHHHH
T ss_pred ecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCC-------C--cccccHHHHHHHHHhc
Confidence 6654311 000 012345555666664 23348888999971111 1 0123467899999999
Q ss_pred CCeEEEecCcccceeee
Q 007069 498 KVDIAIYGHVHNYERTC 514 (619)
Q Consensus 498 ~Vdlvl~GH~H~YeRt~ 514 (619)
+.+++|+||.|.-.-.+
T Consensus 206 ~P~ivl~Ghihe~~~~e 222 (255)
T PF14582_consen 206 NPDIVLCGHIHESHGKE 222 (255)
T ss_dssp --SEEEE-SSS-EE--E
T ss_pred CCcEEEecccccchhhH
Confidence 99999999999754333
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=86.20 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=34.0
Q ss_pred EEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 459 LIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 459 ~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
.|++.|+|+ +.... ..+ . ...+.+.+..++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 577888887 54321 111 1 11236788889999999999999999865543
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.3e-07 Score=99.91 Aligned_cols=176 Identities=18% Similarity=0.197 Sum_probs=101.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCcccccCCc----h---hHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCC
Q 007069 322 NTTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGG 394 (619)
Q Consensus 322 ~~~~~i~~~~~~pDfVl~~GDi~y~~g~----~---~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgg 394 (619)
++++.|.+...++|+|+++||++-.+.- + .......+.+......+|+|+++||||....+.-.. ...+ .
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~--~~~~-~ 275 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAP--GSVP-K 275 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCC--CCCc-c
Confidence 3455555544569999999999944311 1 111233445556667999999999999864332110 0000 0
Q ss_pred cccc--cc------ceeeeccCCC----CCceEEE-EEeCCEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhc
Q 007069 395 ECGV--LA------ETMFYVPAEN----RAKFWYS-TDYGMFRFCVADTEHDWR----------EGTEQYKFIEHCLASV 451 (619)
Q Consensus 395 e~g~--~~------~~~f~~P~~~----~~~~~Ys-fd~G~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~ 451 (619)
..+. .| +..| +|.+. ..+.+|. .-+++.++|+||+..-+. ...+|++|+..+|.++
T Consensus 276 ~~~~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~a 354 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEA 354 (577)
T ss_pred hhhhhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHH
Confidence 0000 00 1111 33221 2344554 355889999999975321 2467899999999987
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc--CCeEEEecCccccee
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY--KVDIAIYGHVHNYER 512 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~--~Vdlvl~GH~H~YeR 512 (619)
+.+... +=+++|.|++ .. ...+. ....+-.++.++ -+-..|.||.|.=+-
T Consensus 355 e~~Gek-Vhil~HIPpG-~~--------~c~~~-ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 355 ESAGEK-VHILGHIPPG-DG--------VCLEG-WSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred HhcCCE-EEEEEeeCCC-Cc--------chhhh-hhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 544433 6688999982 11 11111 133555566665 255679999998653
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.7e-07 Score=90.13 Aligned_cols=57 Identities=19% Similarity=0.478 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhh-------cCCCeEEccCCCccC
Q 007069 322 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA-------STVPYMIASGNHERD 379 (619)
Q Consensus 322 ~~~~~i~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~-------~~vP~~~v~GNHD~~ 379 (619)
.++.++++. .+||+|+++||+++.... ..+|.+..+.++.+. ..+|++.++||||+.
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555553 689999999999965432 245665555554443 268999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.8e-06 Score=93.66 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=51.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCc-hhHHHHHHHhhhh-------
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 362 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~------- 362 (619)
.+||++++|+|.+...... ........+++++++. ..++|+||++||+...... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~---~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDP---VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccCCc---hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 4899999999987432110 0111234455665553 2689999999999965432 1112233333332
Q ss_pred -----h----------------------hcCCCeEEccCCCccC
Q 007069 363 -----I----------------------ASTVPYMIASGNHERD 379 (619)
Q Consensus 363 -----l----------------------~~~vP~~~v~GNHD~~ 379 (619)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1369999999999974
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.2e-06 Score=88.44 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=45.7
Q ss_pred EEEeecCCCCCCCCCcccccccchH-HHHHHHHHhcCCCCEEEEcCccccc----CCchhHHHHHHHhhhhhhc-CCCeE
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 370 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~-~~~~~i~~~~~~pDfVl~~GDi~y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 370 (619)
++++|+|.+... +... ..++.+.+...+||+|+++||+++. .......+++.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987421 1111 2233333332479999999999952 1112222344555566554 58999
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-06 Score=82.20 Aligned_cols=148 Identities=19% Similarity=0.213 Sum_probs=78.0
Q ss_pred CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCC-
Q 007069 332 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAEN- 410 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~- 410 (619)
..=|.|+..|||+.+..-.. -..=++.+..+ ... -+.+.|||||.|+.... .+ -.+|..-
T Consensus 42 ~~eDiVllpGDiSWaM~l~e-a~~Dl~~i~~L-PG~-K~m~rGNHDYWw~s~sk-l~---------------n~lp~~l~ 102 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEE-AEEDLRFIGDL-PGT-KYMIRGNHDYWWSSISK-LN---------------NALPPILF 102 (230)
T ss_pred ChhhEEEecccchhheechh-hhhhhhhhhcC-CCc-EEEEecCCccccchHHH-HH---------------hhcCchHh
Confidence 34589999999998754321 11222333322 122 35699999998752210 00 0011000
Q ss_pred CCceEEEEEeCCEEEEEE---eCC-CCCCCCHHHH--------HHHHH-HHhhccCCCCCeEEEEeeccccCCCCccccC
Q 007069 411 RAKFWYSTDYGMFRFCVA---DTE-HDWREGTEQY--------KFIEH-CLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 477 (619)
Q Consensus 411 ~~~~~Ysfd~G~v~fi~L---dt~-~~~~~~~~Q~--------~WL~~-~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~ 477 (619)
.-+ -.|.++++.++.. ++. .++.+-++|- .-|+. ..++. ++...-.||+.|.|+ ++...
T Consensus 103 ~~n--~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP-~s~~~---- 174 (230)
T COG1768 103 YLN--NGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAAL-PKGVSKFIVMTHYPP-FSDDG---- 174 (230)
T ss_pred hhc--cceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhc-ccCcCeEEEEEecCC-CCCCC----
Confidence 000 0145555444432 222 2232233332 22333 12222 233445899999998 66531
Q ss_pred CCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 478 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 478 ~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
+ ...+.+++++++|+.++.||.|.-.|-.
T Consensus 175 --t------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 175 --T------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred --C------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 1 1255677889999999999999987753
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.7e-06 Score=78.67 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=43.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCch-----hHHHHHHHhhhhhhcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~-----~~wd~f~~~i~~l~~~vP 368 (619)
.|++++||+|.+. ..++.+.+.+++ .++|.|+++||++...... ...++..+.++.+ ..|
T Consensus 1 mri~viSD~Hg~~------------~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL------------PATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH------------HHHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 4899999999431 112233333332 6899999999999532210 0123334444332 358
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999963
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.4e-06 Score=85.15 Aligned_cols=188 Identities=15% Similarity=0.076 Sum_probs=86.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCC-EEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
++|++++|+|..-.+ . -+.+....+..++++. .++| +++.+||++..... ..+......++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhcCCCE
Confidence 479999999943211 0 0111233344444432 3577 88999999954432 11111111222222222345
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCcccccc-ceee-ec---cCCCCCceEEEEEeCCEEE--EEEeCCCCCC-------C
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLA-ETMF-YV---PAENRAKFWYSTDYGMFRF--CVADTEHDWR-------E 436 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~-~~~f-~~---P~~~~~~~~Ysfd~G~v~f--i~Ldt~~~~~-------~ 436 (619)
.++||||+++... .+-.... +.+.++ .... .. ........|--++.+++++ +.+.+..... .
T Consensus 74 ~~~GNHe~d~g~~-~l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 74 VTIGNHEFDYGLD-ALAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred EeeccccccccHH-HHHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 6789999874221 0000000 000111 0000 00 0001123345567787554 4444332110 0
Q ss_pred ---CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 437 ---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 437 ---~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
-....+-+++..+.. +.+...+|++.|.+. .. ...+...+ .+||++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~-~~----------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEELL-AEGADVIILLSHLGL-DD----------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHHH-hCCCCEEEEEeccCc-cc----------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 011223343322221 246677999999886 10 11222222 6899999999998654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.8e-06 Score=84.17 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=32.4
Q ss_pred cCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhh--------------------cCCCeEEccCCCccCC
Q 007069 331 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 380 (619)
Q Consensus 331 ~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~--------------------~~vP~~~v~GNHD~~~ 380 (619)
..+||.|+++||+... +. .++|.+....+..+. ..+|++.++||||...
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3689999999999943 43 344443222222211 1489999999999864
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.7e-05 Score=82.31 Aligned_cols=198 Identities=15% Similarity=0.123 Sum_probs=90.5
Q ss_pred eEEEEEeecCCCCCCC-CCcccccccchHHHHHHHHHhc--CCCCEEEE-cCcccccCCchhHHH---------HHHHhh
Q 007069 294 QRVVIFGDMGKDEADG-SNEYNDFQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 360 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~-~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~-~GDi~y~~g~~~~wd---------~f~~~i 360 (619)
++|++++|+|..-... ...-..-..+....+..++++. .+++.++. +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999999542110 0000000012233444444432 45777766 999995432 12221 122333
Q ss_pred hhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecc-CCCCCceEEEEEeC-CEEE--EEEeCCCC-
Q 007069 361 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYG-MFRF--CVADTEHD- 433 (619)
Q Consensus 361 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G-~v~f--i~Ldt~~~- 433 (619)
..+ ... +.++||||+++... .+...- .+.+.++ .+..... .......|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKVI--KQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHHH--HhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 333 56789999875321 110000 0000111 0111000 00112345667888 7655 44433211
Q ss_pred -C-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCe
Q 007069 434 -W-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVD 500 (619)
Q Consensus 434 -~-----------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vd 500 (619)
+ ....+..++..+.|++ .+...+|+++|... ..... ... ..+.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~----~~~----~~~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE----ESL----TGENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc----ccc----CCccHHHHHHhcCCCCc
Confidence 1 0111234444444543 35678999999886 21100 000 002223344444 5899
Q ss_pred EEEecCcccce
Q 007069 501 IAIYGHVHNYE 511 (619)
Q Consensus 501 lvl~GH~H~Ye 511 (619)
++|.||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.5e-06 Score=85.61 Aligned_cols=138 Identities=20% Similarity=0.296 Sum_probs=80.7
Q ss_pred CCCCEEEEcCcccccCCc---------------------hhHHHH-HHH-----hhhhhhcCCCeEEccCCCccCCCCCC
Q 007069 332 KNIDIVFHIGDICYANGY---------------------ISQWDQ-FTA-----QIEPIASTVPYMIASGNHERDWPGTG 384 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~---------------------~~~wd~-f~~-----~i~~l~~~vP~~~v~GNHD~~~~~~~ 384 (619)
.+||++||+||.+|++.. ...+.. |.. .++.+.+++|++.++.+||+..+...
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 689999999999999852 111111 111 24556778999999999999643321
Q ss_pred CCCCCCCCC-C-----ccc-cccceeeeccCC-----CCCceEEEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 385 SFYGNKDSG-G-----ECG-VLAETMFYVPAE-----NRAKFWYSTDYGMF-RFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 385 ~~y~~~dsg-g-----e~g-~~~~~~f~~P~~-----~~~~~~Ysfd~G~v-~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
. ....... . +.+ ..|......+.. .....|+++.+|.. .|++||+....
T Consensus 108 ~-~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R----------------- 169 (228)
T cd07389 108 D-GAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR----------------- 169 (228)
T ss_pred c-cccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc-----------------
Confidence 1 0000000 0 000 011111222211 23568999999996 99999998653
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCe--EEEecCcccceee
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD--IAIYGHVHNYERT 513 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd--lvl~GH~H~YeRt 513 (619)
+.|.+ + +..|+.|..++.+.++. ++|+|++|..+-.
T Consensus 170 --------------------d~W~~----~--~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 --------------------DSWDG----Y--PAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred --------------------ccccc----c--HHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 12211 1 11277777776655433 8899999986544
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.2e-05 Score=82.44 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=87.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCC-EEEEcCcccccCCchhHH---HHHHHhhhhhhcCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~~~w---d~f~~~i~~l~~~v 367 (619)
++++.+.|+|.-... .... .+....+..++++. ++++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~---~~~~--~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPL---DGGP--VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeeccc---CCCC--cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC
Confidence 478899999832211 0011 11233444444432 4577 9999999995432 2111 1222222221 22
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccc-eeeeccCC-C---CCceEEEEEeCCEE--EEEEeCCCCC------
Q 007069 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE-TMFYVPAE-N---RAKFWYSTDYGMFR--FCVADTEHDW------ 434 (619)
Q Consensus 368 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~~-~---~~~~~Ysfd~G~v~--fi~Ldt~~~~------ 434 (619)
-+.++||||+++... .+... -.+.+.++- ........ . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~--~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKR--LGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHH--HhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 256899999864211 11000 000111110 00000100 0 12456778888855 5555544211
Q ss_pred CCC---HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 435 REG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 435 ~~~---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
..+ .+-.+.+++.+++..+.+..-+|++.|-+. . . . + .+...+ .+||++|.||.|..+
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-~------------d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-N------------D--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-h------------h--H-HHHHhC--CCCceEEecccceeE
Confidence 000 122233333332322246677899999875 1 0 0 1 222222 579999999999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.4e-05 Score=80.36 Aligned_cols=191 Identities=17% Similarity=0.224 Sum_probs=100.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCCch-----------hHHHHHHHhhhhh
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPI 363 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g~~-----------~~wd~f~~~i~~l 363 (619)
|++.||.|..- . .....+..+.+. ..++|++|+.||+.-..... ..+..|.+.++..
T Consensus 1 i~v~Gd~HG~~----------~-~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~ 69 (262)
T cd00844 1 IAVEGCCHGEL----------D-KIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE 69 (262)
T ss_pred CEEEecCCccH----------H-HHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC
Confidence 57899998531 1 111223333222 24699999999996322111 1233444444432
Q ss_pred h-cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCC---CCCC---
Q 007069 364 A-STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH---DWRE--- 436 (619)
Q Consensus 364 ~-~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~---~~~~--- 436 (619)
. ..+|++.+.||||-. .++.....|++.. .+.+.+-. ...+++++++|..|.... ++..
T Consensus 70 ~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v~---~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 70 KKAPILTIFIGGNHEAS-----NYLWELPYGGWVA---PNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ccCCeeEEEECCCCCCH-----HHHHhhcCCCeec---CcEEEecC------CCEEEECCeEEEEecccccccccccccc
Confidence 2 467789999999952 1111111122210 11122211 123567899999887632 1111
Q ss_pred -----CHHHHHHHH-------HHHhhccCCCCCeEEEEeeccccCCCCccccCC-------CCC-----CchhhHHHHHH
Q 007069 437 -----GTEQYKFIE-------HCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD-------GSF-----AEPMGRESLQK 492 (619)
Q Consensus 437 -----~~~Q~~WL~-------~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~ 492 (619)
...+...+. ..|... +.+--|++.|.|+ +..... +.. ..+ ....|...+..
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHH
Confidence 122332211 112221 1233689999998 654321 110 000 01335678899
Q ss_pred HHHhcCCeEEEecCccc-ceeeecc
Q 007069 493 LWQKYKVDIAIYGHVHN-YERTCPI 516 (619)
Q Consensus 493 ll~k~~Vdlvl~GH~H~-YeRt~p~ 516 (619)
++++.+.+.+|+||.|. |++..|-
T Consensus 211 ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred HHHHhCCCEEEEecCCcccceecCC
Confidence 99999999999999999 7777543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.3e-05 Score=76.87 Aligned_cols=196 Identities=15% Similarity=0.153 Sum_probs=99.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccc-hHHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYA-SLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~-s~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
|++++||.=... ... ....+.++.++ .++||++..||++-.. |... ...+.+.. ..+-++ +
T Consensus 1 ~ilfigdi~g~~----------G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~~---~~~~~L~~--~G~D~i-T 63 (255)
T cd07382 1 KILFIGDIVGKP----------GRKAVKEHLPKLKKE-YKIDFVIANGENAAGGKGITP---KIAKELLS--AGVDVI-T 63 (255)
T ss_pred CEEEEEeCCCHH----------HHHHHHHHHHHHHHH-CCCCEEEECCccccCCCCCCH---HHHHHHHh--cCCCEE-E
Confidence 588999973211 000 11233444333 5699999999998443 2221 22222222 134444 5
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHHHHhh
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADT--EHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~~~~Q~~WL~~~L~~ 450 (619)
.|||+++...-..+++..+ .+. ..-++|.......|.-++.+++++-+++- ......-..-++-+++.+++
T Consensus 64 lGNH~fD~gel~~~l~~~~------~~l-~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~ 136 (255)
T cd07382 64 MGNHTWDKKEILDFIDEEP------RLL-RPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEE 136 (255)
T ss_pred ecccccCcchHHHHHhcCc------Cce-EeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHH
Confidence 5999998642112221110 000 11123322234557778888866555442 22211111223445666665
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCcccc
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 530 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~ 530 (619)
.. .+...+||.+|--. .+ + ...+.. ....+||+++.||+|..---. +.
T Consensus 137 lk-~~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d~-----~i--------- 184 (255)
T cd07382 137 LK-EEADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTADE-----RI--------- 184 (255)
T ss_pred Hh-cCCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCcc-----EE---------
Confidence 53 25678999999642 11 1 223332 223469999999999853221 11
Q ss_pred CCCCceEEEE-eCCCCCC
Q 007069 531 GTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 531 ~~~~g~vyiv-~G~gG~~ 547 (619)
-++||.|+. .|+-|..
T Consensus 185 -l~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 185 -LPGGTAYITDVGMTGPY 201 (255)
T ss_pred -eeCCeEEEecCccccCC
Confidence 136787776 6776653
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.3e-06 Score=82.38 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=44.6
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccC-----CchhHHHHH-HHhhhhhhcCCC
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 368 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~-----g~~~~wd~f-~~~i~~l~~~vP 368 (619)
++++|+|.+.... ........+++.. .++|.++++||+++.- ......... ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999875421 1112233333322 4899999999999531 111112222 333444456899
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00022 Score=73.25 Aligned_cols=197 Identities=14% Similarity=0.073 Sum_probs=105.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccch-HHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYAS-LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s-~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
.|++++||.=... +... ...+.++.++ .++||++..||++-.+ |... .-.+.+. ...+-++.
T Consensus 1 m~ilfiGDi~G~~----------Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~--~~GvDviT 64 (266)
T TIGR00282 1 IKFLFIGDVYGKA----------GRKIVKNNLPQLKSK-YQADLVIANGENTTHGKGLTL---KIYEFLK--QSGVNYIT 64 (266)
T ss_pred CeEEEEEecCCHH----------HHHHHHHHHHHHHHh-CCCCEEEEcCcccCCCCCCCH---HHHHHHH--hcCCCEEE
Confidence 4799999983210 1111 1233333333 4799999999999432 2221 2222222 12555655
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC--CCCCC--CHHHHHHHHHH
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWRE--GTEQYKFIEHC 447 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~--~~~Q~~WL~~~ 447 (619)
. |||+++....-.+.+ . ++. .....++|....+..|..++.++.++-+++-. ....+ ...=++-+++.
T Consensus 65 ~-GNH~~Dkge~~~~i~---~--~~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~ 136 (266)
T TIGR00282 65 M-GNHTWFQKLILDVVI---N--QKD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKEL 136 (266)
T ss_pred c-cchhccCcHHHHHHh---c--ccc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHH
Confidence 5 999998543111111 1 010 01112334333344566678888776665532 11111 11122334444
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCc
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKN 527 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~ 527 (619)
+++.+ .+.+.+||.+|.-- .. .+.....+.+.+|++|+.-|+|..---..+
T Consensus 137 i~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------- 187 (266)
T TIGR00282 137 INMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI----------- 187 (266)
T ss_pred HHhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCCccee-----------
Confidence 44442 24678999999542 01 234566777889999999999984322111
Q ss_pred cccCCCCceEEEE-eCCCCCC
Q 007069 528 YYKGTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 528 ~y~~~~~g~vyiv-~G~gG~~ 547 (619)
-++||-|++ +|+.|..
T Consensus 188 ----l~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 188 ----LPKGTAYITDVGMTGPF 204 (266)
T ss_pred ----CCCCCEEEecCCcccCc
Confidence 146888988 7888864
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00022 Score=73.53 Aligned_cols=190 Identities=11% Similarity=0.063 Sum_probs=88.8
Q ss_pred eEEEEEeecCCCCCCCC---------CcccccccchHHHHHHHHHhc--C-CCCEE-EEcCcccccCCchhHHHHHHHhh
Q 007069 294 QRVVIFGDMGKDEADGS---------NEYNDFQYASLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 360 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~s~~~~~~i~~~~--~-~pDfV-l~~GDi~y~~g~~~~wd~f~~~i 360 (619)
++|+.++|+|..-.... ..+... +-...+..++++. . ++|.+ +.+||+...... ..+.+.. .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~--gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMA--GGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCcccccccccccccccccccc--CcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46788888886432110 011111 2234455555542 3 78877 579999955432 2222111 12
Q ss_pred hhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecc-CCCCCceEEEEEeCCEE--EEEEeCCCCCC
Q 007069 361 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHDWR 435 (619)
Q Consensus 361 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~~~ 435 (619)
-..+..+++.++.||||++.... .+.... .+.+.++ .....-. ....-+.|.-++.++++ ||.+.+.....
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~--~l~~~~--~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPE--RVRELF--GRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHH--HHHHHH--hhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 22333466666669999874221 000000 0001111 0000000 00011235556888854 56665432100
Q ss_pred --C--------CHHHHHHHHHHHhhcc-CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007069 436 --E--------GTEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 503 (619)
Q Consensus 436 --~--------~~~Q~~WL~~~L~~~~-r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 503 (619)
+ -....+.+++.+.+.. ..+...+|++.|-+. .. . + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-H---HHhcCCCCcEEE
Confidence 0 0123344544433321 245677999999875 10 0 1 1 2222 5799999
Q ss_pred ecCcccce
Q 007069 504 YGHVHNYE 511 (619)
Q Consensus 504 ~GH~H~Ye 511 (619)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999753
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00054 Score=71.53 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=41.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCC-CEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe-
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY- 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~- 369 (619)
++++.++|+|..-.... ....-+.+-...+..++++. .++ .+++..||++......+.+..- +.+-.++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g-~~~~~~~n~~g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQD-EPTIEALNAMGVD 78 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccC-CcHHHHHHhhCCe
Confidence 47899999995422100 00000112234455555432 234 4899999999544332211110 111112222333
Q ss_pred EEccCCCccCC
Q 007069 370 MIASGNHERDW 380 (619)
Q Consensus 370 ~~v~GNHD~~~ 380 (619)
+.++||||+++
T Consensus 79 a~t~GNHefd~ 89 (288)
T cd07412 79 ASAVGNHEFDE 89 (288)
T ss_pred eeeeccccccc
Confidence 56789999985
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.3e-05 Score=77.87 Aligned_cols=65 Identities=20% Similarity=0.262 Sum_probs=42.7
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----------CCCCEEEEcCcccccCCchhHHHHHHHhhhhh---
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--- 363 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--- 363 (619)
+++||+|.. ...++++++.. .+.|.++++||++..+.... +.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~---~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI---EILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH---HHHHHHHHHHHH
Confidence 478999854 34566777653 25899999999995433222 233333222
Q ss_pred --hcCCCeEEccCCCccC
Q 007069 364 --ASTVPYMIASGNHERD 379 (619)
Q Consensus 364 --~~~vP~~~v~GNHD~~ 379 (619)
....+++.+.||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2356899999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.7e-05 Score=79.78 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=49.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCch-hHHHHHHHhhhhhhc-C-CC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~-~-vP 368 (619)
+||++++|+|.+....... .. ......++++++. ..++|+|+++||++...... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 5899999999875321110 00 0112234444332 25799999999999654322 122234444444433 3 89
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00092 Score=64.27 Aligned_cols=64 Identities=14% Similarity=0.307 Sum_probs=40.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.++++++|+|...+. ......+. ...++|+|||+||.+..... . .+-.. -..+++.|.
T Consensus 2 m~ilviSDtH~~~~~------------~~~~~~~~-~~~~~d~vih~GD~~~~~~~-~---~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLRA------------IEKALKIF-NLEKVDAVIHAGDSTSPFTL-D---ALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChhh------------hhHHHHHh-hhcCCCEEEECCCcCCccch-H---Hhhcc-----cccceEEEE
Confidence 589999999976320 11122222 23689999999999954321 1 11110 146889999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00046 Score=71.80 Aligned_cols=198 Identities=14% Similarity=0.115 Sum_probs=90.5
Q ss_pred ceEEEEEeecCCCCCCCC--Ccc-cccccchHHHHHHHHHh--cCCCC-EEEEcCcccccCCchhHHH-HHHHhhhhhhc
Q 007069 293 LQRVVIFGDMGKDEADGS--NEY-NDFQYASLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 365 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~--~~~-~~~~~~s~~~~~~i~~~--~~~pD-fVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~ 365 (619)
.++|+..+|+|..-.... ... ..+. +....++++.+. ..+++ +++..||....... ..+. .--+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~g-g~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~-~~~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWG-DFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL-SDASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHH-HHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec-eeeecCCChHHHHHHH
Confidence 489999999996422100 000 0111 111222333221 13455 77889999954322 1111 00122333444
Q ss_pred CCCe-EEccCCCccCCCCCC-CCCCCCCCCCcccccc--ceeeeccC--C--CCCceEEEEEeC-CEE--EEEEeCCCC-
Q 007069 366 TVPY-MIASGNHERDWPGTG-SFYGNKDSGGECGVLA--ETMFYVPA--E--NRAKFWYSTDYG-MFR--FCVADTEHD- 433 (619)
Q Consensus 366 ~vP~-~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~--~~~f~~P~--~--~~~~~~Ysfd~G-~v~--fi~Ldt~~~- 433 (619)
.++| ..++||||++....+ ..+... ..+...|+ .+.+.-.. . .....|.-++.+ +++ +|.+-+...
T Consensus 83 ~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 83 MMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred hcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 5555 568999999742211 000000 00000111 11110000 0 011235556665 654 566644321
Q ss_pred ------CCCC--HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCe-EEE
Q 007069 434 ------WREG--TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVD-IAI 503 (619)
Q Consensus 434 ------~~~~--~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vd-lvl 503 (619)
+... ..+.+|+.+.|++ .+..-+|++.|-.+ .. +.. . .+....+.++. ++| ++|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~~----~-~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DAE----F-KVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Ccc----H-HHHHHHHHHhCCCCCEEEE
Confidence 1111 2233488877874 35667999999874 21 111 0 11222333443 567 799
Q ss_pred ecCcccc
Q 007069 504 YGHVHNY 510 (619)
Q Consensus 504 ~GH~H~Y 510 (619)
.||.|..
T Consensus 225 ~GHsH~~ 231 (282)
T cd07407 225 GGHSHVR 231 (282)
T ss_pred eCCcccc
Confidence 9999975
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.4e-05 Score=84.03 Aligned_cols=83 Identities=14% Similarity=0.237 Sum_probs=51.0
Q ss_pred eEEEEEeecCCCC-CCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCch-hHHHHHHHhhhhhh-cCCC
Q 007069 294 QRVVIFGDMGKDE-ADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIA-STVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~-~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~-~~vP 368 (619)
+||++++|+|.+. .... .... ......+.++++. ..++||||++||+.+..... ..-..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~~~~--~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQLNL--PSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhhccC--ccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 4899999999983 2111 0011 1122344444432 16799999999999654321 11134555565543 3799
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++++.||||..
T Consensus 78 v~~I~GNHD~~ 88 (390)
T COG0420 78 VVVIAGNHDSP 88 (390)
T ss_pred EEEecCCCCch
Confidence 99999999974
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=6.8e-05 Score=81.92 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=47.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhH-HHHHHHhhhhhhc-CCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ-WDQFTAQIEPIAS-TVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~-wd~f~~~i~~l~~-~vP~ 369 (619)
+||++++|+|.+..-... ... ......++++++. ..+||+|+++||+.+....... ...+.+.+..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~~~--~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSK--SRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCc--ccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 589999999987421000 000 0011223333332 2689999999999954322211 1223333333332 6899
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00046 Score=71.98 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=29.1
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|-.. .... ..... ... ...+...+...+||++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 35667999999875 3211 00000 011 2233333333689999999999855
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=7e-05 Score=80.06 Aligned_cols=83 Identities=17% Similarity=0.248 Sum_probs=48.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC-chhHHHHHHHh--hhhhh-cCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~--i~~l~-~~v 367 (619)
+||++++|+|.+....... ........++++++. ..++|+|+++||+..... ....-..|... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~---~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPW---FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChh---hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 4899999999875321100 011112344554432 268999999999996532 22111123322 33332 379
Q ss_pred CeEEccCCCccC
Q 007069 368 PYMIASGNHERD 379 (619)
Q Consensus 368 P~~~v~GNHD~~ 379 (619)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00044 Score=70.97 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-CCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~ 370 (619)
++++.++|+|..-..... +.+....+..++++. .+.++++.+||++.... ...+..-...++.+.. ...+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 478999999964321100 111233344444432 25789999999985422 1111111111222211 3444
Q ss_pred EccCCCccCC
Q 007069 371 IASGNHERDW 380 (619)
Q Consensus 371 ~v~GNHD~~~ 380 (619)
.++||||+++
T Consensus 74 ~~~GNHefd~ 83 (257)
T cd07408 74 VTPGNHEFDY 83 (257)
T ss_pred EccccccccC
Confidence 4689999974
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=77.80 Aligned_cols=126 Identities=13% Similarity=0.064 Sum_probs=73.7
Q ss_pred CCceEEEEEeecCCCCCCCCCccc----ccccchHHHHHHH---HHhcCCCCEEEEcCcccccCC--chhHHHHHHHhhh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQL---IQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIE 361 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~i---~~~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~ 361 (619)
+..+|+++++|.|.-+.-.+..+. .|..+ --+++. .....+||.++++||+.+.+. ..++|.+..+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D--~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGND--WYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhH--HHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHH
Confidence 456999999999986532211111 11110 011111 112368999999999995432 2567766665566
Q ss_pred hhhc---CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC
Q 007069 362 PIAS---TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD 433 (619)
Q Consensus 362 ~l~~---~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~ 433 (619)
.+.. .+|.+.++||||.+.... .-.....||.- ..++..-+|+.|+.-|+++|++..
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~---~fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFES---VFGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccc------------cchhHHHHHHH---hhcchhhhhccCCceeEEeeehhh
Confidence 5543 799999999999864221 00001122210 012233568999999999998753
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00017 Score=67.76 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=71.0
Q ss_pred HHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc
Q 007069 321 LNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA 400 (619)
Q Consensus 321 ~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~ 400 (619)
...++.+.++..+.|++|.+||+.-.+....+|..|+.- .....+|.|++-||||
T Consensus 14 ~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~----------------------- 68 (150)
T cd07380 14 FEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP----------------------- 68 (150)
T ss_pred HHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC-----------------------
Confidence 344555544456799999999999554433334443332 2234788899999986
Q ss_pred ceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCC-C
Q 007069 401 ETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD-G 479 (619)
Q Consensus 401 ~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~-~ 479 (619)
+.-|++.|.|+ +......... .
T Consensus 69 --------------------------------------------------------~~DILlTh~wP-~gi~~~~~~~~~ 91 (150)
T cd07380 69 --------------------------------------------------------GVDILLTSEWP-KGISKLSKVPFE 91 (150)
T ss_pred --------------------------------------------------------CCCEEECCCCc-hhhhhhCCCccc
Confidence 23477777777 5432110000 0
Q ss_pred CCCchhhHHHHHHHHHhcCCeEEEecCcc-cceeeecccc
Q 007069 480 SFAEPMGRESLQKLWQKYKVDIAIYGHVH-NYERTCPIYQ 518 (619)
Q Consensus 480 ~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H-~YeRt~p~~~ 518 (619)
......+...+..++++.+..++|+||.| -|||- |..+
T Consensus 92 ~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~~ 130 (150)
T cd07380 92 ETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYRN 130 (150)
T ss_pred ccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-CccC
Confidence 00012346688889999999999999999 57764 5443
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00077 Score=70.11 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=45.1
Q ss_pred eEEEEEeCCEE--EEEEeCCCC--C-C--CC---HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCc
Q 007069 414 FWYSTDYGMFR--FCVADTEHD--W-R--EG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 483 (619)
Q Consensus 414 ~~Ysfd~G~v~--fi~Ldt~~~--~-~--~~---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~ 483 (619)
.|.-++.++++ ||.+-+... . . .+ .+-.+.+++.+++....+..-+|++.|-.. . +
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--~------------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--E------------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--h------------h
Confidence 35567888855 555544321 0 0 11 223455666665554345677889999764 0 0
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 484 PMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 484 ~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
. + .|...+ .+||+++.||.|...
T Consensus 197 d--~-~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-HHHHcC--CCCcEEEeCCcCccc
Confidence 0 1 222222 579999999999964
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00013 Score=72.68 Aligned_cols=72 Identities=18% Similarity=0.197 Sum_probs=46.3
Q ss_pred EEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccC-CchhHHHHHHHh----hhhhhc-CCCeE
Q 007069 298 IFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYAN-GYISQWDQFTAQ----IEPIAS-TVPYM 370 (619)
Q Consensus 298 v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~----i~~l~~-~vP~~ 370 (619)
+++|.|.+.. .|.....+.+.++. ..+.|.++++||++..- |. ..|.+..++ +..++. .+|++
T Consensus 2 FISDlHL~~~---------~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~-~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPK---------RPALTAFFLDFLREEAAQADALYILGDIFDGWIGD-DEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCC---------CcHHHHHHHHHHHhccccCcEEEEechhhhhhhcC-CcccHHHHHHHHHHHHHHhcCCeEE
Confidence 6899998843 13333455556654 23569999999999531 22 245544443 333444 59999
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||+-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999963
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0013 Score=74.86 Aligned_cols=200 Identities=17% Similarity=0.159 Sum_probs=88.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc------CC-CCEEEEcCcccccCCchhHHHHHHHhhhhh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPI 363 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~------~~-pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 363 (619)
...++|+.+.|+|..-... .+... + +..+..++++. .+ .-+++..||+.... ....+..- +.+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~~~~--G-~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EYGEY--G-LAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--ccCCc--c-HHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 11111 1 22333333321 13 35888899998532 12211110 111112
Q ss_pred hcCCCe-EEccCCCccCCCCCCCCCCCCCCCCccccccc-eeeeccC--CCCCceEEEEEeCCEE--EEEEeCCCC--C-
Q 007069 364 ASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLAE-TMFYVPA--ENRAKFWYSTDYGMFR--FCVADTEHD--W- 434 (619)
Q Consensus 364 ~~~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~~--~- 434 (619)
+..+.+ ..++||||+++... .+.... .+...|+- ....... ...-..|.-++.++++ ||.+-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 222222 45679999986421 111000 01111110 0010110 0112345667888855 555544321 1
Q ss_pred CCC-------HHHHHHHHHHHhhccC-CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc---CCeEEE
Q 007069 435 REG-------TEQYKFIEHCLASVDR-QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY---KVDIAI 503 (619)
Q Consensus 435 ~~~-------~~Q~~WL~~~L~~~~r-~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~---~Vdlvl 503 (619)
.+. .+..+-+++..++... .+..-+|++.|..+ ..... .+ +.. . .-..+.++. +||++|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~-~-~d~~la~~~~~~~IDvIl 250 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA-P-GDVEMARSLPAGGLDMIV 250 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC-c-cHHHHHHhCCccCceEEE
Confidence 000 1112223333333321 45778999999876 22110 00 000 0 112334443 799999
Q ss_pred ecCcccce
Q 007069 504 YGHVHNYE 511 (619)
Q Consensus 504 ~GH~H~Ye 511 (619)
.||.|.+-
T Consensus 251 gGHsH~~~ 258 (551)
T PRK09558 251 GGHSQDPV 258 (551)
T ss_pred eCCCCccc
Confidence 99999853
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0012 Score=81.43 Aligned_cols=196 Identities=16% Similarity=0.163 Sum_probs=90.0
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEE-cCcccccCCchh--HHHHHHHhhhhhhcC
Q 007069 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFH-IGDICYANGYIS--QWDQFTAQIEPIAST 366 (619)
Q Consensus 290 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~-~GDi~y~~g~~~--~wd~f~~~i~~l~~~ 366 (619)
+...+++++++|+|..- .+ + ......++++.+ .+++.++. +||++....... ++....+.+. .
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~g------~-~r~~~~i~~~r~--~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln----~ 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-DG------A-AKRVTKIKEVKE--ENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMK----E 722 (1163)
T ss_pred CceEEEEEEEeecccCC-CC------H-HHHHHHHHHHHh--hCCCeEEEecCCCCCCcchhhhcCChHHHHHHh----C
Confidence 33459999999999431 10 1 111123333332 46777655 999985432111 1112222222 2
Q ss_pred CCe-EEccCCCccCCCCCC--CCCCCCC--CC----Ccccccc--ceeeeccCCC---CCceEEEEEeCCEE--EEEEeC
Q 007069 367 VPY-MIASGNHERDWPGTG--SFYGNKD--SG----GECGVLA--ETMFYVPAEN---RAKFWYSTDYGMFR--FCVADT 430 (619)
Q Consensus 367 vP~-~~v~GNHD~~~~~~~--~~y~~~d--sg----ge~g~~~--~~~f~~P~~~---~~~~~Ysfd~G~v~--fi~Ldt 430 (619)
+.+ +.++||||+++.... .+..... .. .....|+ .+.+...... ....|.-++.++++ ||.+-+
T Consensus 723 lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 723 MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 333 559999999753210 0000000 00 0000111 1111111111 11345666888854 566654
Q ss_pred CCC--C-CC----C---HHHHHHHHHHHhhcc-CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cC
Q 007069 431 EHD--W-RE----G---TEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YK 498 (619)
Q Consensus 431 ~~~--~-~~----~---~~Q~~WL~~~L~~~~-r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~ 498 (619)
..- + .+ + .+..+.+++..++.. ..+..-+|++.|... ... . ..+ ......|.++ -+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 0 01 0 122233444333332 145677999999875 211 0 001 1122334444 37
Q ss_pred CeEEEecCcccce
Q 007069 499 VDIAIYGHVHNYE 511 (619)
Q Consensus 499 Vdlvl~GH~H~Ye 511 (619)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999853
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00056 Score=77.31 Aligned_cols=205 Identities=13% Similarity=0.125 Sum_probs=96.3
Q ss_pred CCCCCceEEEEEeecCCCCCCCCCccccccc--chHHHHHHHHHh---cCCCCEEEEcCcccccCCchhHHHHHHHhhhh
Q 007069 288 PGQNSLQRVVIFGDMGKDEADGSNEYNDFQY--ASLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEP 362 (619)
Q Consensus 288 ~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~i~~~---~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 362 (619)
......++|+...|+|..-... .+..... +.+..+..++++ ..+..++|..||+...+..... ..-.+.+-.
T Consensus 21 ~~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 21 AAETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred ccCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 3345569999999999764310 1110001 112222222222 2345789999999965332211 000111122
Q ss_pred hhcCCCe-EEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeeccC--CCCCceEEEEEeCCEE--EEEEeCCC--C
Q 007069 363 IASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPA--ENRAKFWYSTDYGMFR--FCVADTEH--D 433 (619)
Q Consensus 363 l~~~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~--~ 433 (619)
++..++| ..++||||++.... ++... -.+...|+ .+.+.-+. ....+.|.-++.++++ +|.+.+.. .
T Consensus 98 ~mN~m~yDa~tiGNHEFd~g~~--~l~~~--~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 98 LLNALGYDAMTLGNHEFDYGLE--ALARL--LDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred HHhhcCCcEEeecccccccCHH--HHHHH--HhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 2333444 56999999985421 00000 00000111 01111111 1123567778888854 56665421 1
Q ss_pred CCC--------CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEec
Q 007069 434 WRE--------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYG 505 (619)
Q Consensus 434 ~~~--------~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~G 505 (619)
+.. -....+++++.+.+..+....-+|++.|-++ ...... ..... .. ..... ..+|+++.|
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~~--~~--~~~~~-----~~iD~i~~G 242 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEVP--GD--VDVAV-----PGIDLIIGG 242 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-ccccc--cc--ccccc-----cCcceEecc
Confidence 111 1234566666666554333567899999886 222111 10000 00 11111 449999999
Q ss_pred Ccccc
Q 007069 506 HVHNY 510 (619)
Q Consensus 506 H~H~Y 510 (619)
|.|.+
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99964
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00083 Score=64.55 Aligned_cols=54 Identities=20% Similarity=0.398 Sum_probs=34.2
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCch--hHHHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
+.+++++ .+||.|+++||+++..... .++.. ..........+|++.+.||||..
T Consensus 33 l~~~~~~-~~~d~lii~GDl~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 33 LDRLIEE-YGPERLIILGDLKHSFGGLSRQEFEE-VAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHh-cCCCEEEEeCcccccccccCHHHHHH-HHHHHhccCCCeEEEEcccCccc
Confidence 3334433 6899999999999654321 11222 11233334578999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0011 Score=68.63 Aligned_cols=65 Identities=17% Similarity=0.287 Sum_probs=44.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+++++||.|.. ...+++++++. ++.|.++++||+++. |..+ .+.++.+..+ ..++..
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlVdr-Gp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLVNR-GPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCccCC-CcCH--HHHHHHHHhc--CCCeEE
Confidence 58999999854 34566666654 468999999999954 4332 2334444333 346889
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0011 Score=66.94 Aligned_cols=66 Identities=20% Similarity=0.289 Sum_probs=44.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----C--------CCCEEEEcCcccccCCchhHHHHHHHhhhh
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 362 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----~--------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 362 (619)
|++++||.|.. ...+++++++. . +.|.++++||+++. |..+ .+.++.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 68999999865 34566666653 1 36899999999954 4322 234444444
Q ss_pred hhcCCCeEEccCCCcc
Q 007069 363 IASTVPYMIASGNHER 378 (619)
Q Consensus 363 l~~~vP~~~v~GNHD~ 378 (619)
+...-.+..+.||||.
T Consensus 64 l~~~~~~~~v~GNHE~ 79 (234)
T cd07423 64 MVAAGAALCVPGNHDN 79 (234)
T ss_pred HhhCCcEEEEECCcHH
Confidence 4333467899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0013 Score=66.87 Aligned_cols=76 Identities=14% Similarity=0.292 Sum_probs=47.3
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCCCEEEEcCcccccCC----c---------hhHHHHHHHh
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 359 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----~~pDfVl~~GDi~y~~g----~---------~~~wd~f~~~ 359 (619)
++++|+|.+... + .......+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 689999976421 0 111122333333322 25799999999996421 0 1224455566
Q ss_pred hhhhhcCCCeEEccCCCccC
Q 007069 360 IEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 360 i~~l~~~vP~~~v~GNHD~~ 379 (619)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 67777789999999999974
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0095 Score=67.89 Aligned_cols=79 Identities=16% Similarity=0.134 Sum_probs=41.8
Q ss_pred ceEEEEEeCC--EEEEEEeCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCC
Q 007069 413 KFWYSTDYGM--FRFCVADTEHD-W---REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSF 481 (619)
Q Consensus 413 ~~~Ysfd~G~--v~fi~Ldt~~~-~---~~~-----~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~ 481 (619)
..|.-++.++ +-||.|.+... . .++ ....+=+++..++....+..-+|++.|... ..
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~~---------- 196 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--EK---------- 196 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--HH----------
Confidence 3456678887 55777765321 1 111 011122222222222245677899999653 10
Q ss_pred CchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 482 AEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 482 ~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
. . .+.++ .+||++|.||.|.+-
T Consensus 197 --d--~----~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 197 --N--C----EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred --H--H----HHHhcCCCCCEEEeCCCCccc
Confidence 0 1 12333 379999999999964
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0012 Score=66.44 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=50.5
Q ss_pred eEEEEEeecCCCCCCCCCccccccc--chHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQY--ASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
-+.++++|+|.+............| ...++++++.+. ..+||.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3588999999874310000000011 112345555442 257999999999997654435555555555543 3599
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.++||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999953
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0013 Score=62.93 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=42.9
Q ss_pred EEEeecCCCCCCCC----CcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 297 VIFGDMGKDEADGS----NEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 297 ~v~GD~g~~~~~~~----~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.+++|+|.+..... ..+...+......++.+.+...++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 46889888754210 01111111111233444444567999999999996433 2222 2333332 3689999
Q ss_pred cCCCccC
Q 007069 373 SGNHERD 379 (619)
Q Consensus 373 ~GNHD~~ 379 (619)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999964
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0016 Score=65.95 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCCCEEEEcCcccccCCchhHHHHHHHhhhhh-hcCCCe
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFTAQIEPI-ASTVPY 369 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l-~~~vP~ 369 (619)
|++++||.|... ..++++++.. ...|.++++||+++ .|..+ .+..+.+..+ ....++
T Consensus 2 ~~~~IsDIHG~~---------------~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s--~~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGEY---------------QKLLTIMDKINNERKPEETIVFLGDYVD-RGKRS--KDVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCCH---------------HHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCCh--HHHHHHHHHHhhcCCCe
Confidence 689999999431 2234444432 23599999999995 44332 1223322222 234578
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.++||||..
T Consensus 64 ~~l~GNHE~~ 73 (235)
T PHA02239 64 VTLLGNHDDE 73 (235)
T ss_pred EEEECCcHHH
Confidence 9999999963
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0019 Score=65.84 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=43.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-----------CCCCEEEEcCcccccCCchhHHHHHHHhhhhh
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI 363 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~-----------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 363 (619)
|++++||.|.. ...+.+++++. +.-|.++++||+++ .|..+ .+.++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 68999999854 34566666652 13479999999995 44333 2333333333
Q ss_pred hcCCCeEEccCCCcc
Q 007069 364 ASTVPYMIASGNHER 378 (619)
Q Consensus 364 ~~~vP~~~v~GNHD~ 378 (619)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0025 Score=63.19 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=42.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...++++++.. .++|.++++||+++.+... .+.++.+. ..+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEE
Confidence 68999999843 23456666543 3689999999999644332 23333332 246889
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.017 Score=53.71 Aligned_cols=80 Identities=11% Similarity=0.159 Sum_probs=43.6
Q ss_pred EEEEEeecCCCCCCC--CCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 295 RVVIFGDMGKDEADG--SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 295 rf~v~GD~g~~~~~~--~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.+.++||+|.+...- ...+.+...-....+....+....=|.+.|+||++...... ......++.+-..+ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 467789998875421 11222211111122333333344568999999999544322 23344455554443 789
Q ss_pred cCCCccC
Q 007069 373 SGNHERD 379 (619)
Q Consensus 373 ~GNHD~~ 379 (619)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999964
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0029 Score=63.51 Aligned_cols=66 Identities=18% Similarity=0.238 Sum_probs=43.0
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CCCEEEEcCcccccCCchhHHHHHHHhhhhhhc
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 365 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~ 365 (619)
+.++||.|.. ...+++++++.. ..|.++++||+++. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 3689999865 345666666531 36899999999954 4332 234444444333
Q ss_pred CCCeEEccCCCccC
Q 007069 366 TVPYMIASGNHERD 379 (619)
Q Consensus 366 ~vP~~~v~GNHD~~ 379 (619)
.-.+..+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 34688899999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0036 Score=70.47 Aligned_cols=82 Identities=13% Similarity=0.290 Sum_probs=51.2
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h-------cCCCCEEEEcCcccccCCc-------------
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D-------LKNIDIVFHIGDICYANGY------------- 349 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~-~-------~~~pDfVl~~GDi~y~~g~------------- 349 (619)
....++++++|+|.+... + ....+..+.+.+. . ..+++.++++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987431 1 0111222222222 1 2579999999999964221
Q ss_pred hhHHHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 350 ISQWDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 350 ~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
..+++.+.+.++.+...+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112344555666666789999999999974
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.01 Score=62.81 Aligned_cols=39 Identities=28% Similarity=0.181 Sum_probs=25.2
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|--- +. +. ..|.++ .+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~d------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------IE------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------hH------HHHHhcCCCCCEEEeCCCCccC
Confidence 45667899999631 11 01 123444 379999999999864
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.004 Score=62.29 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=42.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...+++++++. .+.|-++++||+++. |..+ .+-++.+.. ..+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlvDr-Gp~s--~~vl~~l~~----~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLIDR-GPQS--LRCLQLLEE----HWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCcccCC-CcCH--HHHHHHHHc----CCceE
Confidence 89999999865 34566666654 257999999999954 4322 123333322 24578
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999953
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.023 Score=67.09 Aligned_cols=96 Identities=20% Similarity=0.253 Sum_probs=46.9
Q ss_pred cCCCCCCCCceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCC-CEEEEcCcccccCCchhHHHH---
Q 007069 284 ASPYPGQNSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQ--- 355 (619)
Q Consensus 284 T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~--- 355 (619)
+.|..+..-.++|+...|+|..-... ..|.. -...-+..+..++++. +++ -+++..||++...-. ..+..
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~~-dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl-~~~~a~~~ 183 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVNY-DYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPL-GTYKAIVD 183 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCcccc-cccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc-cchhhhcc
Confidence 44544445569999999999763210 00100 0011123333444432 223 488899999964321 11100
Q ss_pred --HH---HhhhhhhcCCCe-EEccCCCccCCC
Q 007069 356 --FT---AQIEPIASTVPY-MIASGNHERDWP 381 (619)
Q Consensus 356 --f~---~~i~~l~~~vP~-~~v~GNHD~~~~ 381 (619)
+. ..+-.++..+.| ..++||||+++.
T Consensus 184 ~~~~g~~~P~i~amN~LGyDA~tLGNHEFDyG 215 (814)
T PRK11907 184 PVEEGEQHPMYAALEALGFDAGTLGNHEFNYG 215 (814)
T ss_pred ccccCcchHHHHHHhccCCCEEEechhhcccC
Confidence 00 011222233333 468999999853
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.26 Score=49.47 Aligned_cols=198 Identities=20% Similarity=0.156 Sum_probs=109.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+=... |. ....+-+..+.++ -++||||..|-++ ++|.---|+.|.+.++. .+-+ ++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~dv-iT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GADV-ITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCCE-Eec
Confidence 4899999983221 00 0011223333332 4799999999999 67765556666666543 3333 589
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC--CCCCC-CHHHHHHHHHHHhh
Q 007069 374 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWRE-GTEQYKFIEHCLAS 450 (619)
Q Consensus 374 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~-~~~Q~~WL~~~L~~ 450 (619)
|||=++.+..-.+....+ . .-.-.+.|....+.-|.-|+..+..+.+++-. ..... -..=.+=+++.|.+
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999986433211111000 0 01112344444566677788877666655532 22111 12223445566665
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCcccc
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 530 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~ 530 (619)
.+ .+++-+||-+|.-- +| |. .-.-++-+-+|.+|+.=|+|.-.--+.+
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------EK----~a~g~yldGrvsavvGTHTHV~TaD~rI-------------- 186 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------EK----NAFGWYLDGRVSAVVGTHTHVPTADERI-------------- 186 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------hh----hhhheEEcCeEEEEEeccCcccccccee--------------
Confidence 43 45677888899642 11 11 1112233567999999999984433222
Q ss_pred CCCCceEEEE-eCCCCC
Q 007069 531 GTLNGTIHVV-AGGGGA 546 (619)
Q Consensus 531 ~~~~g~vyiv-~G~gG~ 546 (619)
-++|+-|+. .|+-|.
T Consensus 187 -L~~GTayiTDvGMtG~ 202 (266)
T COG1692 187 -LPKGTAYITDVGMTGP 202 (266)
T ss_pred -cCCCcEEEecCccccc
Confidence 246888887 777775
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0067 Score=60.72 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=41.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...+++++++. .+.|.++++||+++.+.... +.++.++ .-.++.
T Consensus 16 ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~~ 73 (218)
T PRK09968 16 HIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFIS 73 (218)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcEE
Confidence 89999999854 23456666554 36899999999995433222 2223222 224678
Q ss_pred ccCCCcc
Q 007069 372 ASGNHER 378 (619)
Q Consensus 372 v~GNHD~ 378 (619)
+.||||.
T Consensus 74 v~GNHE~ 80 (218)
T PRK09968 74 VKGNHEA 80 (218)
T ss_pred EECchHH
Confidence 9999996
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.022 Score=70.68 Aligned_cols=48 Identities=25% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|..+ ..... ..+ . ......|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~--~~~~~--~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI--ESEYQ--SSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc--CCCCC--CCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46777999999875 21110 011 0 2233445544 489999999999964
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.007 Score=62.06 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=42.1
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.++||.|.. ...+++++++. ++.|.++++||++. .|..+ .+.++.+..+. ..+..+.
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 589999854 34566666653 35799999999995 44433 23444444332 3678999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.12 Score=53.03 Aligned_cols=136 Identities=11% Similarity=0.138 Sum_probs=75.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h---------cCCCCEEEEcCcccccCCc----------------
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 349 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~-~---------~~~pDfVl~~GDi~y~~g~---------------- 349 (619)
+++++|++.+... + ....++.+...+. + ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 6889999987531 1 1112233333332 1 1345679999999964331
Q ss_pred ---hhHHHHHHHhhhhhhcCCCeEEccCCCccCCCC--CCCCCCCCCCCCccccccc---eeeeccCCCCCceEEEEEeC
Q 007069 350 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPG--TGSFYGNKDSGGECGVLAE---TMFYVPAENRAKFWYSTDYG 421 (619)
Q Consensus 350 ---~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~--~~~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~~Ysfd~G 421 (619)
..+.+++-+.+..+.+.+|+.+.|||||-.... +..+- .|-.+-. ..+.. -.|. |.|+.+
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh-------~~lfp~s~~~~~~~~----vtNP-~~~~i~ 142 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLH-------RCLFPKSSNYSTLNL----VTNP-YEFSID 142 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCC-------HHHhhcccccCCcEE----eCCC-eEEEEC
Confidence 223444555666777899999999999964211 00110 0000000 01111 1222 569999
Q ss_pred CEEEEEEeCCCC-----CCCCHHHHHHHHHHHhh
Q 007069 422 MFRFCVADTEHD-----WREGTEQYKFIEHCLAS 450 (619)
Q Consensus 422 ~v~fi~Ldt~~~-----~~~~~~Q~~WL~~~L~~ 450 (619)
+++|++.+...- +.+.+.-.+.|++.|+-
T Consensus 143 g~~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 143 GVRVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred CEEEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 999998876531 33344456777777763
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.017 Score=63.32 Aligned_cols=54 Identities=15% Similarity=0.165 Sum_probs=37.5
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG 348 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g 348 (619)
..+||++..|.|.+...... .-...+..++.+|+.- .++.|||+..||+...+.
T Consensus 12 ntirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 35999999999986432111 1123456777776653 368999999999997763
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.086 Score=62.16 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=28.8
Q ss_pred ceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCC-CEEEEcCccccc
Q 007069 293 LQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYA 346 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~ 346 (619)
.++|+...|+|..-... ..|.. -...-+..+..++++. +++ -++|..||++..
T Consensus 39 ~L~IL~TnDiHg~l~~~-dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLMNY-DYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCcCc-CccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 58999999999764211 00100 0011233344444432 223 488899999954
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.013 Score=60.70 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=39.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--------CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 365 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~- 365 (619)
+++++||.|... ..++++++.. ...+.++++||+++.+.... +.++.+..+..
T Consensus 3 ~iyaIGDIHG~~---------------d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~---eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGYI---------------SKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR---KVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCCH---------------HHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH---HHHHHHHHhhhc
Confidence 589999998652 2344443321 13568999999995443322 23333322222
Q ss_pred --CCCeEEccCCCccC
Q 007069 366 --TVPYMIASGNHERD 379 (619)
Q Consensus 366 --~vP~~~v~GNHD~~ 379 (619)
...++.+.||||..
T Consensus 65 ~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 65 HPKQRHVFLCGNHDFA 80 (304)
T ss_pred ccccceEEEecCChHH
Confidence 22478899999953
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.084 Score=53.45 Aligned_cols=171 Identities=15% Similarity=0.088 Sum_probs=83.9
Q ss_pred CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCC
Q 007069 332 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 411 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 411 (619)
-++||||..|.++ ++|.---...+.+.++ ..+-+ .+.|||=++..+-..+.+.. . ..-.-.++|....
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~~~p 93 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEIFDFIDKE---P----RILRPANYPPGTP 93 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTHHHHHHH----S----SEE--TTS-TT-S
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHHHHHHhcC---C----CcEECCCCCCCCC
Confidence 4799999999999 5554221122222221 23444 58899998743321111100 0 0011123455556
Q ss_pred CceEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHH
Q 007069 412 AKFWYSTDYGMFRFCVADTE--HDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRES 489 (619)
Q Consensus 412 ~~~~Ysfd~G~v~fi~Ldt~--~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~ 489 (619)
+.-|..++.++.++.++|-. ....+...=+.-+++.|++. +.+.+.+||=+|.=- + . -+.
T Consensus 94 G~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa---T----------S----EK~ 155 (253)
T PF13277_consen 94 GRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA---T----------S----EKQ 155 (253)
T ss_dssp SBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S----H----------H----HHH
T ss_pred cCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc---H----------H----HHH
Confidence 78899999999877777643 22322223345555666554 357788888899532 0 0 123
Q ss_pred HHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEE-eCCCCCC
Q 007069 490 LQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 490 l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv-~G~gG~~ 547 (619)
-.-.+-+-+|.+|+-=|+|.---- .++ -++||-||+ +|+-|..
T Consensus 156 A~g~~lDGrvsaV~GTHTHVqTaD-----erI----------Lp~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 156 AMGWYLDGRVSAVVGTHTHVQTAD-----ERI----------LPGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHBTTBSEEEEESSSS-BS-------EE-----------TTS-EEES---EBEES
T ss_pred HHHHHhCCcEEEEEeCCCCccCch-----hhc----------cCCCCEEEecCccccCc
Confidence 344556789999999999983221 121 246888887 7777764
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.018 Score=47.36 Aligned_cols=74 Identities=18% Similarity=0.203 Sum_probs=43.2
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
+|..+++... ..+++.|+|..... .....-.|+|....+... ....+. ++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD---WQEVTV-----------------PGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE---EEEEEE-----------------ETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee---eeeeee-----------------eeeeeeeee
Confidence 4555555443 47899999999741 111234556654433220 000111 112337788
Q ss_pred cCCCCCCEEEEEEeeec
Q 007069 253 KELWPNAMYTYKVGHRL 269 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~ 269 (619)
+||+|+++|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998754
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.008 Score=60.89 Aligned_cols=174 Identities=23% Similarity=0.304 Sum_probs=95.3
Q ss_pred CEEEEcCcccccCCch-------hHHHHHHHh----hhhhhcCCCeEEccCCCccCCCC---CCCCCCCC--CC---CCc
Q 007069 335 DIVFHIGDICYANGYI-------SQWDQFTAQ----IEPIASTVPYMIASGNHERDWPG---TGSFYGNK--DS---GGE 395 (619)
Q Consensus 335 DfVl~~GDi~y~~g~~-------~~wd~f~~~----i~~l~~~vP~~~v~GNHD~~~~~---~~~~y~~~--ds---gge 395 (619)
==++..||++.+.|-+ .++.+|-.. ..++...+|+|+-.||||.+-.. +-.+|+.. +. ...
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr 207 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHR 207 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcC
Confidence 3466778999765421 122222211 23344579999999999986321 11222110 00 000
Q ss_pred cccccceeeeccCC--CCCceEEEEEeCCEEEEEEeCCCCCC-CC-HHHHHHHHHHHhhccCCCCCeEEEEeeccc-cCC
Q 007069 396 CGVLAETMFYVPAE--NRAKFWYSTDYGMFRFCVADTEHDWR-EG-TEQYKFIEHCLASVDRQKQPWLIFLAHRVL-GYS 470 (619)
Q Consensus 396 ~g~~~~~~f~~P~~--~~~~~~Ysfd~G~v~fi~Ldt~~~~~-~~-~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~-~ys 470 (619)
.++-++. ++|.. +....-||+|+|++|.+-+-+...-. ++ .--+-||+.+|.......+| ++++.|.-. .++
T Consensus 208 ~~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfs 284 (392)
T COG5555 208 SDVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFS 284 (392)
T ss_pred cCcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCcccee
Confidence 0000100 11211 22344589999999988775542111 11 12357999999876545667 888888632 234
Q ss_pred CCccccC------CCC-----CCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 471 SGIFYAV------DGS-----FAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 471 s~~~~~~------~~~-----~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
+..|... .|. ...+. |..|...++-|+|-..+.||.|.+.-
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccce
Confidence 3333211 111 11223 77899999999999999999998743
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.014 Score=58.23 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=40.9
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-CCCeEEcc
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 373 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~~v~ 373 (619)
.++||+|.. ...+.+++++. ...|.++++||+++. |... .+.++.+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 23455666543 368999999999954 3322 222333322211 45789999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.14 Score=59.25 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=42.0
Q ss_pred ceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--C-CCCEEEEcCcccccCCchhHHHHHH-------Hhh
Q 007069 293 LQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--K-NIDIVFHIGDICYANGYISQWDQFT-------AQI 360 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~-~pDfVl~~GDi~y~~g~~~~wd~f~-------~~i 360 (619)
.++++...|+|..-... ..|.. -...-+..+..++++. + .--+++..||++..... ..|.... ..+
T Consensus 2 ~l~Il~TnDlH~~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~ 79 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDY-DYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPV 79 (626)
T ss_pred eEEEEEEcCCccCccCC-cccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChH
Confidence 37899999999763210 00000 0011123334444332 1 23588899999964322 2121110 011
Q ss_pred hhhhcCCCe-EEccCCCccCC
Q 007069 361 EPIASTVPY-MIASGNHERDW 380 (619)
Q Consensus 361 ~~l~~~vP~-~~v~GNHD~~~ 380 (619)
-.++..+.| ..++||||+++
T Consensus 80 ~~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 80 YKAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHHhhcCccEEecccccccc
Confidence 112233333 46899999975
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.17 Score=58.90 Aligned_cols=87 Identities=20% Similarity=0.254 Sum_probs=42.8
Q ss_pred CceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CC-CCEEEEcCcccccCCchhHHHHHHH-------h
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTA-------Q 359 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~~-pDfVl~~GDi~y~~g~~~~wd~f~~-------~ 359 (619)
..++|+...|+|..-... ..|.+ -...-+..+..++++. +. --+++..||++.... ...|..+.. .
T Consensus 24 ~~L~IL~TnDlHg~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp-~~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDF-DYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSP-LGDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCC-ccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCch-hhhhhhhccccCCCcch
Confidence 459999999999753211 00000 0011123334444432 22 348888999995432 222211110 1
Q ss_pred hhhhhcCCCe-EEccCCCccCC
Q 007069 360 IEPIASTVPY-MIASGNHERDW 380 (619)
Q Consensus 360 i~~l~~~vP~-~~v~GNHD~~~ 380 (619)
+-..+..+.| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 46899999975
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.032 Score=57.66 Aligned_cols=64 Identities=14% Similarity=0.253 Sum_probs=41.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+..++||.|.. ...++++++++ +..|-++++||++..+.... +.++.+..+. -.+..
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEE
Confidence 46899999865 34566666654 35799999999995443322 2333333321 13568
Q ss_pred ccCCCcc
Q 007069 372 ASGNHER 378 (619)
Q Consensus 372 v~GNHD~ 378 (619)
+.||||.
T Consensus 62 VlGNHD~ 68 (279)
T TIGR00668 62 VLGNHDL 68 (279)
T ss_pred EEChhHH
Confidence 9999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.16 Score=51.30 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=38.1
Q ss_pred HHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 442 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 442 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
+-+++.+++++ ++...+|++.|-...|.. ..... ...+...+.+.++|+++.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSY---------YPTPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCC---------CCCHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 34555555553 347889999996541211 00111 345555666679999999999987643
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.087 Score=55.26 Aligned_cols=184 Identities=21% Similarity=0.302 Sum_probs=96.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCC-c-------hhHH---HHHHHhhh
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANG-Y-------ISQW---DQFTAQIE 361 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g-~-------~~~w---d~f~~~i~ 361 (619)
+|++|-|++|..- .....++..+-+. ..++|++|..||+---+. . ...+ ..|++...
T Consensus 1 MrIaVqGCcHG~L-----------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-----------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhH-----------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 4789999997431 0112333333322 147999999999863221 1 1222 23444442
Q ss_pred -hhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC---CCCCCC
Q 007069 362 -PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE---HDWREG 437 (619)
Q Consensus 362 -~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~---~~~~~~ 437 (619)
.+.+.+|.+++=||||... +......||=. ..+.|.|- +--...+|+||+-.|+.- ++|..|
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL~eLpyGGwV---ApNIyYlG------~agVv~~~gvRIggiSGI~k~~dy~kg 135 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YLQELPYGGWV---APNIYYLG------YAGVVNFGGVRIGGISGIYKEHDYRKG 135 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HHHhcccCcee---ccceEEee------ecceEEECCEEEeeccchhhhhhcccC
Confidence 3456789999999999641 11111111110 01112121 001367899999888753 333321
Q ss_pred -----------------HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCC------CC-C-----CchhhHH
Q 007069 438 -----------------TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD------GS-F-----AEPMGRE 488 (619)
Q Consensus 438 -----------------~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~------~~-~-----~~~~~r~ 488 (619)
-.+++ ...|.+ -+.|--|++.|-=+ -+.. .|++. .. + ...+|..
T Consensus 136 h~E~ppyn~stiRsiYHvR~~d--V~~Lkq---lk~piDIfLSHDWP-~GI~-~yGd~~~LLr~KPFFrqeie~~~LGSp 208 (456)
T KOG2863|consen 136 HFEWPPYNNSTIRSIYHVRISD--VAKLKQ---LKHPIDIFLSHDWP-RGIY-YYGDKKQLLRLKPFFRQEIEEGKLGSP 208 (456)
T ss_pred CCCCCCccchhhhhhhhhhhhh--hHHHHh---hcCcceEEeecCCC-cchh-hcCCHHHHHhcCcHHHHHHhcCCcCCh
Confidence 11111 122333 24565688888633 1111 11110 00 0 0123456
Q ss_pred HHHHHHHhcCCeEEEecCccc
Q 007069 489 SLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 489 ~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+++||++-+...+|+.|.|.
T Consensus 209 ~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 209 ALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHHhCcchhhhhhHhh
Confidence 889999999999999999997
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.052 Score=57.39 Aligned_cols=67 Identities=19% Similarity=0.153 Sum_probs=41.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---CCEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCe
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 369 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~---pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~ 369 (619)
+++++||+|.. ...+.++++...- -+..+++||+++. |..+ -+-+..+-.+. ..--+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyVDR-G~~s--~Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFVDR-GKRS--IEILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEeccccCC-CCCc--HHHHHHHHHHhhcCCCcE
Confidence 58999999854 3456666665322 3679999999954 4332 12222222211 12247
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.53 Score=56.57 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=77.3
Q ss_pred cceEEEEEEeeccc--ceEEEEEeCCCCCcEEEEeeccccc----cCCCCCcc-eeeecCCCCCcEEEEEEeCCCCCCCc
Q 007069 132 GKGSLKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAF----TNPNAPVY-PRLAQGKTWNEMTVTWTSGYGINEAE 204 (619)
Q Consensus 132 g~~~~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~----~~~~~P~~-~~La~~~~~~~m~V~W~t~~~~~~~~ 204 (619)
-......+|-+++. +|+|++-.-+..-+-. .|..|++ .-|.+|-| +.|.... .++++|.|..........
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~--sS~~i~V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGSGV--SSADITVRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCCCC--CCCceEEEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccccc
Confidence 45566777778886 7888776632211100 1222221 24556666 8775554 799999999876543333
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 205 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 205 ~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
...-|...............++. .|....-.+.+|+|+|.|.+||.....+|.+..|++..|.|
T Consensus 647 ~itgYkIRy~~~~~~~~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT 710 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSREDEVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAET 710 (1381)
T ss_pred eEEEEEEEecccCcccccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccC
Confidence 44444332111100011111111 11112223578999999999998877778777889999988
Q ss_pred CC
Q 007069 285 SP 286 (619)
Q Consensus 285 ~p 286 (619)
+-
T Consensus 711 ~~ 712 (1381)
T KOG4221|consen 711 PE 712 (1381)
T ss_pred cc
Confidence 63
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.47 Score=48.03 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=36.7
Q ss_pred HHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 444 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
+++.+++++ .+...+|++.|--..|... .... ...+...+.+.+||+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~---------p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE---------PTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC---------CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 444555543 3578899999976422110 0111 334555555578999999999988754
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.095 Score=52.63 Aligned_cols=84 Identities=15% Similarity=0.241 Sum_probs=49.7
Q ss_pred eEEEEEeecCCCCCCCC----Ccccccccc-hHHHHHHHHHhcCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhhcC
Q 007069 294 QRVVIFGDMGKDEADGS----NEYNDFQYA-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAST 366 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~----~~~~~~~~~-s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~ 366 (619)
-+.++++|.|.+-...- ...-.+|.. ....++++++. .+|+-++++||+-.+-+. ..+|+.....++.+..+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 36899999998743100 000112221 12344445554 689999999999977554 34554333333332222
Q ss_pred CCeEEccCCCccC
Q 007069 367 VPYMIASGNHERD 379 (619)
Q Consensus 367 vP~~~v~GNHD~~ 379 (619)
-+..+.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999965
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.57 Score=54.19 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=34.7
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..+|+|+||+|||.|.+||......|-+.+|....|.|.+.
T Consensus 497 ~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 497 TTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred cceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 35788999999999999999876556667899999999875
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.13 Score=54.24 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCC--CeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v--P~~ 370 (619)
+++++||+|.. ...+.++++... ..+-++++||+++ .|..+ -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999854 234555555433 3488999999995 44322 12222222222222 478
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.18 Score=54.43 Aligned_cols=67 Identities=21% Similarity=0.223 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CC-CEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCe
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 369 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~--~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~ 369 (619)
++.++||+|.. ...+.++++... .. +.++++||+++ .|... -+.+..+..+. ..--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyVD-RGp~S--lEvl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYVD-RGAWG--LETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEeccccC-CCCCh--HHHHHHHHHHhhccCCeE
Confidence 58999999854 345666666432 22 45999999994 45332 12222222221 12347
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.79 Score=36.84 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=25.5
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEE
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFK 283 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~ 283 (619)
-...+.+.+|.|+++|.++|.....++...|+....|+
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~~ 92 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVT 92 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCccccccc
Confidence 34677789999999999999765333333444434443
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.34 Score=50.16 Aligned_cols=67 Identities=18% Similarity=0.193 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP~~ 370 (619)
+++++||+|.. ...+.++++.. ...+-++++||+++ .|... -+.+..+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s--~e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFS--IEVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCccC-CCCCh--HHHHHHHHHHHhcCCCCEE
Confidence 58999999854 23455555542 34678999999995 44332 1222222221 1223578
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999975
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.27 Score=51.27 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 370 (619)
.+.++||+|.. ...+.++++.. +..+-++++||+++ .|.... +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~---------------~~dL~~ll~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ---------------FYDLLELFRVGGDPPDTNYLFLGDYVD-RGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHHcCCCCCCeEEEEeEECC-CCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 38999999854 23455555542 34567899999995 454321 2222222221 233588
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.35 Score=51.13 Aligned_cols=23 Identities=13% Similarity=0.436 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHhcCCeEEEecCc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHV 507 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~ 507 (619)
.+.+.++..++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 35789999999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=92.38 E-value=1.2 Score=41.44 Aligned_cols=86 Identities=26% Similarity=0.304 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcc
Q 007069 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDY 566 (619)
Q Consensus 487 r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~ 566 (619)
.+.|.-|-++.+||+.++||+|.++... -+|-.||--|++-.... . +.......
T Consensus 96 ~~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn-~-------~~t~~~~P 149 (183)
T KOG3325|consen 96 PESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFN-V-------SDTDIIVP 149 (183)
T ss_pred HHHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCc-c-------cccCCCCC
Confidence 3477777788999999999999988763 24667777777632211 1 11111456
Q ss_pred cEEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007069 567 GFVKLTAFDHSNLLFEYKKSSDGKV-YDSFRISR 599 (619)
Q Consensus 567 Gy~~l~v~n~~~l~~~~~~~~dG~v-~D~f~i~k 599 (619)
.|+.+++ .++.+..-.++--||+| +|.....|
T Consensus 150 SFvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 150 SFVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ceEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 7999998 55555444444567775 45555444
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.34 Score=50.79 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
+.+.++..+++++.++++=||.-.
T Consensus 221 g~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 221 GKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred CHHHHHHHHHHcCCeEEEECCccc
Confidence 578999999999999999999854
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.49 Score=49.77 Aligned_cols=25 Identities=8% Similarity=0.142 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+.++..+++++.++++=||.-.
T Consensus 213 fg~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 213 FGAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhh
Confidence 3578999999999999999999844
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.56 E-value=0.48 Score=50.14 Aligned_cols=25 Identities=12% Similarity=0.321 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+.+...+++++.++++=||.-.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCccc
Confidence 3578999999999999999999843
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.46 E-value=10 Score=45.78 Aligned_cols=191 Identities=15% Similarity=0.087 Sum_probs=105.0
Q ss_pred ccceecccCccccEEEEEEeCC-----CCCCCCEEEEEeCCCCCCCCCCCCCCCCCCCCccCCCceeEEeccCCCCcccc
Q 007069 57 SPAVVGLKGQNSEWVTVEYSSP-----NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGT 131 (619)
Q Consensus 57 ~p~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 131 (619)
.|.=|.-.|.....++|+|... +-..-.++=.|.|..... .+..--+....==+|.|.+.+-..|
T Consensus 719 ~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~--- 788 (1051)
T KOG3513|consen 719 NPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF--- 788 (1051)
T ss_pred CCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc---
Confidence 4444444455668899999984 344556777788875541 1110001001113566776543233
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEE
Q 007069 132 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQW 209 (619)
Q Consensus 132 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~y 209 (619)
=.-.++++.+|.+-+= ...++.+.-|+.= .-+.+|..+.+ ..-+.++|.|.|....- .....-.|+|
T Consensus 789 tpyevKVqa~N~~GeG--------p~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y 857 (1051)
T KOG3513|consen 789 TPYEVKVQAINDQGEG--------PESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVKY 857 (1051)
T ss_pred ceeEEEEEEecCCCCC--------CCCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEEE
Confidence 3457888899887532 2233444555432 12455655554 44457999999954322 1234467888
Q ss_pred eecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 210 GRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 210 g~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
....+... ...... -.+-.-.++|+||+|+|.|++.|..-..-|.+.-|...+-+|.+.
T Consensus 858 ~~~~~~~~--~~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~ 916 (1051)
T KOG3513|consen 858 WKINEKEG--SLSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKA 916 (1051)
T ss_pred EEcCCCcc--ccccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCC
Confidence 86544321 011111 123456778999999999999998654334333344444445443
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=91.22 E-value=0.7 Score=50.80 Aligned_cols=78 Identities=18% Similarity=0.384 Sum_probs=51.2
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-------CCCCEEEEcCcccccCC-c------------hh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-------KNIDIVFHIGDICYANG-Y------------IS 351 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~-------~~pDfVl~~GDi~y~~g-~------------~~ 351 (619)
..+++++++|.|.+.. +|. ...+...++-+ .+...++.+||+++.-| + ..
T Consensus 224 e~v~v~~isDih~GSk----~F~------~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFL------EDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYE 293 (481)
T ss_pred cceEEEEEeeeecccH----HHH------HHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchH
Confidence 4588999999998642 321 11222222222 33579999999996432 1 23
Q ss_pred HHHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 352 QWDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 352 ~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
|++++-+.+..+-..+-+++.|||||..
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 5666666666666788899999999975
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.59 Score=49.49 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999854
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=90.68 E-value=0.54 Score=49.28 Aligned_cols=24 Identities=13% Similarity=0.300 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
+.+.++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 578999999999999999999843
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.35 E-value=3.6 Score=46.41 Aligned_cols=55 Identities=24% Similarity=0.255 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-c-CCeE-EEecCcccc
Q 007069 439 EQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-Y-KVDI-AIYGHVHNY 510 (619)
Q Consensus 439 ~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~-~Vdl-vl~GH~H~Y 510 (619)
.|.+|-.+.++. .+..-+|+++|.|. ..+ . + ++.+...+++ + ++++ ||-||.|..
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~--~~~----~-----e---~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPV--RDD----D-----E---WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred hccchHHHHhhc---cCccEEEEeccccc--ccc----h-----h---hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 467787777765 56677899999996 221 0 1 2233334444 3 6788 999999983
|
|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=87.53 E-value=4.2 Score=45.81 Aligned_cols=93 Identities=19% Similarity=0.338 Sum_probs=61.7
Q ss_pred EEEEEeC---CCCCCCCEEEEEeCCCCCCCCCCCCCCCCCCCCccCCCceeEEeccCCCCcccccc---eEEEEE---Ee
Q 007069 71 VTVEYSS---PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGK---GSLKLM---LI 141 (619)
Q Consensus 71 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l~ 141 (619)
|+..|+- ..|+..||||||=-.-++. .-...|.|+... .+| ..|+ ..+.|+ |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543322 345788888642 244 4443 478886 44
Q ss_pred ec-ccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCC
Q 007069 142 NQ-RSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGK 185 (619)
Q Consensus 142 n~-r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~ 185 (619)
+. =..|.|++... .-.++++|.|..|..|+ |.-.-+++.+
T Consensus 84 k~~~e~YqfcYv~~---~g~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQ---KGEVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECC---CccEEEecCCcccCCCC-ccccceeecc
Confidence 43 23588888763 23578899999998775 6555566654
|
This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region []. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=85.90 E-value=5.5 Score=30.62 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.2
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007069 247 IHTSFLKELWPNAMYTYKVGHR 268 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~ 268 (619)
.+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999764
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=82.66 E-value=28 Score=42.69 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=74.6
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeCCC------CCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC
Q 007069 131 TGKGSLKLMLINQRS--DFSVALFSGGL------LKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE 202 (619)
Q Consensus 131 ~g~~~~~~~l~n~r~--~~~f~~f~~~~------~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~ 202 (619)
++.| +.+.+.|.-- -|.|+.-.-+. +.|..| + +.|..|.+ .=+..-.+.++.|+|..+.- .
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV--~-----t~pEgp~~-~~a~ats~~ti~v~WepP~~--~ 547 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKV--T-----TQPEGPVQ-LQAYATSPTTILVTWEPPPF--G 547 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCcccCCccCCceEE--e-----cCCCCCcc-ccccccCcceEEEEecCCCC--C
Confidence 4556 7777777554 57777655321 223222 2 23346666 33344568999999998752 2
Q ss_pred CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007069 203 AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF 282 (619)
Q Consensus 203 ~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 282 (619)
..+...|..--... ...+...++ .--++.+|+||+|.|+|.|||......|.+.-|...+|
T Consensus 548 n~~I~~yk~~ys~~--~~~~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V 608 (1381)
T KOG4221|consen 548 NGPITGYKLFYSED--DTGKELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITV 608 (1381)
T ss_pred CCCceEEEEEEEcC--CCCceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEE
Confidence 33555554210000 001111111 12467788999999999999998876777666788888
Q ss_pred EcCC
Q 007069 283 KASP 286 (619)
Q Consensus 283 ~T~p 286 (619)
+|..
T Consensus 609 ~Tls 612 (1381)
T KOG4221|consen 609 RTLS 612 (1381)
T ss_pred Eecc
Confidence 8863
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=82.23 E-value=3.9 Score=41.65 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 440 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 440 Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
+.+.+++++++++ ++..++||+.|--..|.. ...+. .+.+...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888875 568899999996431211 11222 4456666667899999999999987654
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=81.35 E-value=2.8 Score=41.20 Aligned_cols=74 Identities=16% Similarity=0.269 Sum_probs=42.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCch---------hHH-HHHH----H
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYI---------SQW-DQFT----A 358 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~---------~~w-d~f~----~ 358 (619)
|++++|.+.+.. ....+.++++++.. .+|+.+|++|+++...... ... ..+. +
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888887632 12245566666532 4699999999999753211 111 1222 2
Q ss_pred hhhhhhcCCCeEEccCCCccC
Q 007069 359 QIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 359 ~i~~l~~~vP~~~v~GNHD~~ 379 (619)
.++.+...+++..+||+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 334555688999999999975
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.82 E-value=3.6 Score=42.14 Aligned_cols=65 Identities=25% Similarity=0.454 Sum_probs=43.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe--
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY-- 369 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~-- 369 (619)
.-.||+.++|.|.-..+ + ++.+.-|+.+|+||.. ..|...+-..|-+.+ .+.|+
T Consensus 60 ~~~r~VcisdtH~~~~~------------------i-~~~p~gDvlihagdfT-~~g~~~ev~~fn~~~----gslph~y 115 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD------------------I-NDIPDGDVLIHAGDFT-NLGLPEEVIKFNEWL----GSLPHEY 115 (305)
T ss_pred CceEEEEecCcccccCc------------------c-ccCCCCceEEeccCCc-cccCHHHHHhhhHHh----ccCccee
Confidence 34799999999864321 1 1347789999999999 445444334444433 34454
Q ss_pred -EEccCCCccCC
Q 007069 370 -MIASGNHERDW 380 (619)
Q Consensus 370 -~~v~GNHD~~~ 380 (619)
+++.||||...
T Consensus 116 KIVIaGNHELtF 127 (305)
T KOG3947|consen 116 KIVIAGNHELTF 127 (305)
T ss_pred eEEEeeccceee
Confidence 67999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 619 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-15 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-15 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-15 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 4e-13 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 619 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-107 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-106 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 9e-38 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 4e-25 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 4e-10 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 6e-07 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 1e-05 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 329 bits (844), Expect = e-107
Identities = 95/444 (21%), Positives = 162/444 (36%), Gaps = 55/444 (12%)
Query: 172 NPNAPVYPRLAQGKTW-NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGS 230
NAP + QG + ++WT+ Y A W + + +T+ +
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYN 80
Query: 231 MCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 290
+IH +K+L + Y Y++G ++ F P PG
Sbjct: 81 YTS-----------AFIHHCTIKDLEYDTKYYYRLGFGD------AKRQFWFVTPPKPGP 123
Query: 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI 350
+ + GD+G+ + S T Q+ V +GD+ Y+N +
Sbjct: 124 DVPYVFGLIGDIGQT------------HDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWP 171
Query: 351 ----SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV 406
++WD + E + P++ +GNHE D Y + V +
Sbjct: 172 NHDNNRWDTWGRFSERSVAYQPWIWTAGNHEID-------YAPDIGEYQPFVPFTNRYPT 224
Query: 407 PAENRA---KFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLA 463
P E WY+ V + + + + QYK+ L V+R + PWLI L
Sbjct: 225 PHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLV 284
Query: 464 HRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICT- 522
H L S Y E M R + + YKVDI GHVH+YER+ +
Sbjct: 285 HAPLYNSYEAHYMEG----EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339
Query: 523 NKEKNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL 579
K + +++ G GG +E T Q ++S +R+ +G + ++
Sbjct: 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHA 399
Query: 580 LFEYKKSSDGKVY--DSFRISRDY 601
F + ++ DG DS + Y
Sbjct: 400 HFSWHRNQDGASVEADSLWLLNRY 423
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 325 bits (834), Expect = e-106
Identities = 93/444 (20%), Positives = 162/444 (36%), Gaps = 56/444 (12%)
Query: 172 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGS 230
NAP + QG M ++W + + V++ + R G ++
Sbjct: 15 GYNAPQQVHITQGDLVGRAMIISWVTMD--EPGSSAVRYWSEKNGRKRIAKGKMS----- 67
Query: 231 MCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 290
G+IH + +++L N Y Y+VG R + + F P G
Sbjct: 68 -----TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN------TTRRFSFITPPQTGL 116
Query: 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI 350
+ + GD+G+ + S T K V +GD+ YA+ Y
Sbjct: 117 DVPYTFGLIGDLGQS------------FDSNTTLSHYELSPKKGQTVLFVGDLSYADRYP 164
Query: 351 S----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV 406
+ +WD + E + P++ +GNHE + + + + E ++V
Sbjct: 165 NHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIE-------FAPEINETEPFKPFSYRYHV 217
Query: 407 PAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLA 463
P E + + FWYS V + + GT QY +++ L V R + PWLI L
Sbjct: 218 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 277
Query: 464 HRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC-T 522
H L S + E M R + + KYKVD+ GHVH YER+ +
Sbjct: 278 HSPLYNSYNHHFMEG----EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKI 332
Query: 523 NKEKNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL 579
+ +++ G G + Q +S +R+ +G + ++
Sbjct: 333 TNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHA 392
Query: 580 LFEYKKSSDGKVY--DSFRISRDY 601
F + ++ DG DS +
Sbjct: 393 HFSWNRNQDGVAVEADSVWFFNRH 416
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 141 bits (356), Expect = 9e-38
Identities = 55/330 (16%), Positives = 96/330 (29%), Gaps = 54/330 (16%)
Query: 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD 354
R V GD G + + + A+ ++ L D + +GD Y G D
Sbjct: 8 RFVAVGDWGG--VPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKD 64
Query: 355 -QFTAQIE-----PIASTVPYMIASGNHE-RDWPGTGSFYGNKDSGGECGVLAETM-FYV 406
+F E P VP+ + +GNH+ Y + F +
Sbjct: 65 KRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKI 124
Query: 407 PAENRAKFWYSTDYGMFRFCVAD-------TEHDWREGTEQYKFIEHCLASVDRQKQPWL 459
P N + + D D + Q +I+ LA+ K+ ++
Sbjct: 125 PRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYV 181
Query: 460 IFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQN 519
+ H + +S + + L L +KV + GH HN +
Sbjct: 182 LVAGHYPV-WSIA-EHGPTHCL-----VKQLLPLLTTHKVTAYLCGHDHNLQYLQDE--- 231
Query: 520 ICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTT-------WSLYRDYDYGFVKLT 572
NG V++G G L+ + GF +
Sbjct: 232 --------------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE 277
Query: 573 AFDHSNLLFEYKKSSDGKVYDSFRISRDYR 602
+ Y + GK ++ R R
Sbjct: 278 -ITPKEMSVTY-IEASGKSLFKTKLPRRAR 305
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 106 bits (264), Expect = 4e-25
Identities = 44/343 (12%), Positives = 95/343 (27%), Gaps = 71/343 (20%)
Query: 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICY---ANGYIS 351
R GD GKD Q + +Q I++ + + + G
Sbjct: 5 RFASLGDWGKD--------TKGQILNAKYFKQFIKNER-VTFIVSPGSNFIDGVKGLNDP 55
Query: 352 QWDQFTAQI---EPIASTVPYMIASGNHE--RDWPGTGSFYGNKDSGGECGVLAETMFYV 406
W + E +P+ G + ++ E
Sbjct: 56 AWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADA 115
Query: 407 PAENR--------------------AKFWYSTDYGMFRFCVADT-----EHDWREGTE-Q 440
+ + F DT +++ E
Sbjct: 116 TNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKA 175
Query: 441 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD 500
+ ++ L+ + ++I + + + Y+ S L L + +VD
Sbjct: 176 WNDLKSQLSVAKKIA-DFIIVVGDQPI-------YSSGYSRGSSYLAYYLLPLLKDAEVD 227
Query: 501 IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSL 560
+ I GH +N E N H+ G G + ++ + SL
Sbjct: 228 LYISGHDNNMEVIED------------------NDMAHITCGSGSMS-QGKSGMKNSKSL 268
Query: 561 YRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRD 603
+ D GF ++ ++ ++ S G+V + +++ +
Sbjct: 269 FFSSDIGFCVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 4e-10
Identities = 32/248 (12%), Positives = 70/248 (28%), Gaps = 44/248 (17%)
Query: 320 SLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPI-ASTVPYMIASGNH 376
S T + D++ D++ GD+ NG + ++ ++ + + + GNH
Sbjct: 77 SDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNH 135
Query: 377 ERDWPGTGSFYGNKDSGGECGVLAETMFY--------VPAENRAKFWYSTD-YGMFRFCV 427
+ + P F +K + + + + Y +
Sbjct: 136 DINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195
Query: 428 ADT------------EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFY 475
DT + +I+ A + + L H + ++ I
Sbjct: 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVI-- 253
Query: 476 AVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNG 535
+ + + +D ++ GH+H QNI K T
Sbjct: 254 ---QKGYTINYNQQVIDALTEGAMDFSLSGHIH--------TQNI------RSAKSTDGK 296
Query: 536 TIHVVAGG 543
I +
Sbjct: 297 EITDIVTN 304
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 31/211 (14%), Positives = 61/211 (28%), Gaps = 47/211 (22%)
Query: 315 DFQYASLNTTRQL---IQDLK----NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST- 366
Y +++ +L ++ L D + GD+ G + + + +EP A+
Sbjct: 41 RRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQL 99
Query: 367 -VPYMIASGNH-ERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFR 424
+ GNH +R L + + R
Sbjct: 100 GAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAP-LDRVCMIDGLR 140
Query: 425 FCVADT----EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS 480
V DT H Q ++ LA ++ L H +
Sbjct: 141 IIVLDTSVPGHHHGEIRASQLGWLAEELA--TPAPDGTILALHHPPI--------PSVLD 190
Query: 481 FAEPMG---RESLQKLWQKYKVDIAIYGHVH 508
A + + +L ++ + V + GH+H
Sbjct: 191 MAVTVELRDQAALGRVLRGTDVRAILAGHLH 221
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 30/210 (14%), Positives = 58/210 (27%), Gaps = 42/210 (20%)
Query: 314 NDFQYASLNTTRQLIQDLKNI-------DIVFHIGDICYANGYISQWDQFTAQIEPIAST 366
+ Y ++ + + D V GDI G ++ + +
Sbjct: 15 GEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIV-NCGRPEEYQVARQILGSL--N 71
Query: 367 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 426
P + GNH D L + ++ + D R
Sbjct: 72 YPLYLIPGNH--DDKALFL-----------EYLQPLCPQLGSDAN-NMRCAVDDFATRLL 117
Query: 427 VADT----EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 482
D+ E ++E L + +P IF+ H L + +
Sbjct: 118 FIDSSRAGTSKGWLTDETISWLEAQLF--EGGDKPATIFMHHPPL--------PLGNAQM 167
Query: 483 EPMG---RESLQKLWQKYK-VDIAIYGHVH 508
+P+ L L +++ + GH H
Sbjct: 168 DPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 2e-06
Identities = 72/549 (13%), Positives = 155/549 (28%), Gaps = 148/549 (26%)
Query: 34 HPLSRI----AIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDD----- 84
+ +SR+ +R+A L V + G+ G WV ++ + V
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNV----LIDGVLGSGKTWVALDVCL-SYKVQCKMDFK 183
Query: 85 --WIAV---FSP-----------SNFSASTCSAENPSVNPPLLCSAPIKYQYANY-SSPQ 127
W+ + SP + S + S N L + I+ + S
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS-IQAELRRLLKSKP 242
Query: 128 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 187
Y + L L+L+N ++ + F+ KI T V L+ T
Sbjct: 243 Y----ENCL-LVLLNVQNAKAWNAFNLSC----------KILLTTRFKQVTDFLSAATTT 287
Query: 188 NEMTVTWTSGYGINEAEA-FVQW-GRKGGD-----RTHSPAGTLTFDRGSMCGA-----P 235
+ + +E ++ +++ + D T +P S+
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP---RRL---SIIAESIRDGL 341
Query: 236 ARTVGWRDPGY-----IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF-KASPYPG 289
A W+ I S L L P ++F+ + F ++ P
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYR------KMFDRLSV------FPPSAHIPT 389
Query: 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY 349
L +I+ D+ K + N SL + + K I I Y
Sbjct: 390 I-LLS--LIWFDVIKSDVM--VVVNKLHKYSL-----VEKQPKESTISIP--SI-----Y 432
Query: 350 ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 409
+ ++E + ++ N + + D Y
Sbjct: 433 LE----LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ------------Y---- 472
Query: 410 NRAKFWYSTDYGMFRFCVADTEHDWREGTEQY---KFIEHCLASVDRQKQPW-----LIF 461
+YS + + + +F+E + W ++
Sbjct: 473 -----FYS--HIGHHLKNIEHPERMTLFRMVFLDFRFLE---QKIRHDSTAWNASGSILN 522
Query: 462 LAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC 521
++ Y I D + + ++ K + ++ + T + +
Sbjct: 523 TLQQLKFYKPYIC-DNDPKYERLV--NAILDFLPKIEE------NLICSKYTD-LLRIAL 572
Query: 522 TNKEKNYYK 530
+++ ++
Sbjct: 573 MAEDEAIFE 581
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 46.5 bits (109), Expect = 1e-05
Identities = 38/277 (13%), Positives = 75/277 (27%), Gaps = 69/277 (24%)
Query: 295 RVVIFGDM----GKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANG 348
+ D+ +D + + S + R + + + V +GDI +G
Sbjct: 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI--IDG 64
Query: 349 YISQWDQFTAQIEPIAST-----VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETM 403
+ + D ++ + + V GNHE S ++ + + T
Sbjct: 65 HNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ---RTGTD 121
Query: 404 FYVPAENRAKFWYS-TDYGMFRFCVADT-------------------------------- 430
+ Y + FRF + D
Sbjct: 122 TGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDL 181
Query: 431 --------------EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA 476
+ + +Q ++++ L D +++ LIF V ++
Sbjct: 182 NLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAA----- 236
Query: 477 VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513
D L L V I GH H+ R
Sbjct: 237 -DPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRC 272
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 619 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.87 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.73 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.48 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.38 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.32 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.26 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.25 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.24 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.23 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.2 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.03 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.01 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.01 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.98 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.95 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.7 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.7 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.7 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.67 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.62 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.62 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.06 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.06 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 97.97 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.87 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.85 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.81 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.77 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.76 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.76 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.66 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.66 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.35 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.2 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 97.2 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.19 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.17 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 97.16 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 97.12 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.1 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.1 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 97.05 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 97.05 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.0 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.99 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 96.96 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.94 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.93 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.9 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 96.9 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.9 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.9 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.8 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.78 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.76 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 96.75 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.72 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.7 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.68 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.67 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.67 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.67 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.66 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.58 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.57 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.54 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.52 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.48 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.47 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.46 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 96.41 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.39 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.34 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.3 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.28 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 96.27 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.26 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.25 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.21 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.21 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 96.18 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.17 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.17 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.14 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.11 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.11 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.1 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.03 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.02 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.96 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.93 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 95.93 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.9 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.86 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.86 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.83 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 95.83 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 95.83 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.82 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 95.81 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.78 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 95.77 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.77 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.75 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.69 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 95.68 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.62 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 95.58 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 95.58 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 95.56 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 95.56 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 95.53 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.53 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.5 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.43 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 95.42 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.41 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 95.36 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.35 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.33 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.31 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.29 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.25 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.23 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.23 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.16 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.13 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.03 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 94.97 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 94.94 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.89 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 94.87 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 94.86 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.81 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.8 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 94.7 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 94.64 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 94.59 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 94.59 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.56 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 94.56 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 94.54 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.51 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.49 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 94.42 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.36 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 94.29 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 94.1 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.09 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 93.85 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 93.73 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 93.54 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 93.4 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 93.31 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 93.27 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 93.1 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 92.99 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 92.93 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 92.85 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 92.85 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 92.71 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 92.61 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.34 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 92.33 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 92.1 | |
| 2lfe_A | 138 | E3 ubiquitin-protein ligase HECW2; structural geno | 92.09 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 91.95 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 91.81 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 91.75 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 91.5 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 91.45 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 90.96 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 90.14 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 90.05 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 90.02 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 89.64 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 89.64 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 89.41 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 89.33 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 89.27 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 89.21 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 89.15 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 88.75 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 88.57 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 87.87 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 86.62 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 85.39 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 85.01 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 84.58 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 83.81 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 82.56 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 82.51 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 81.93 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 81.91 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 81.25 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-62 Score=530.46 Aligned_cols=386 Identities=24% Similarity=0.406 Sum_probs=308.9
Q ss_pred CCCCCcceeeecCCC-CCcEEEEEEeC-CCCCCCccEEEEeecCCCCccccCc-ceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKT-WNEMTVTWTSG-YGINEAEAFVQWGRKGGDRTHSPAG-TLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~-~~~m~V~W~t~-~~~~~~~~~V~yg~~~~~~~~~~~~-~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
++++|+|+||+++++ .++|+|+|+|. .. ++.+.|+||+.++.....+.+ +.+|...+ ..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEecC-----------CcCCEEE
Confidence 568999999999988 49999999998 43 467899999877654433322 22333210 2468999
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHH
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI 328 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~ 328 (619)
+|+|+||+|||+|+|||+++ .||+.++|+|+|.++....+||+++||+|... ....+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~g------~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~------------~~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH------------DSNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECCG------GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECCC------CccceeEEECCCCCCCCCCeEEEEEEeCCCCC------------chHHHHHHHH
Confidence 99999999999999999862 48999999999987777789999999998641 1245677776
Q ss_pred HhcCCCCEEEEcCcccccCCc----hhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceee
Q 007069 329 QDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMF 404 (619)
Q Consensus 329 ~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 404 (619)
+...+||||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ...+....+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEE
Confidence 643489999999999998765 5689999999999888999999999999864210 0 0011224567788
Q ss_pred eccCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCC
Q 007069 405 YVPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSF 481 (619)
Q Consensus 405 ~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~ 481 (619)
.||.+ ..++.||+|++|+++||+||++.++..+.+|++||+++|++++|++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 88853 2457899999999999999999887778999999999999988778999999999999 87654322222
Q ss_pred CchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCC--CccccCCCCceEEEEeCCCCCCC--C-CCCCCCC
Q 007069 482 AEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKE--KNYYKGTLNGTIHVVAGGGGAGL--A-EFTPLQT 556 (619)
Q Consensus 482 ~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~--~~~y~~~~~g~vyiv~G~gG~~l--~-~~~~~~~ 556 (619)
+.+ |+.|+++|.+++||++|+||+|.|||++|++++++.... ...| .+++|++||++|+||+.. . .+..++|
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~-~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV-SDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE-ECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc-cCCCccEEEEeCCCccccccccccCCCCC
Confidence 345 899999999999999999999999999999987642111 1122 246899999999999763 2 4556789
Q ss_pred CcceeeeCcccEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCC
Q 007069 557 TWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDY 601 (619)
Q Consensus 557 ~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~ 601 (619)
+|++|+..+|||++|++.|+++|.++|+++.||+ |+|+|||.|.+
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 9999999999999999999999999999999998 89999999975
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-61 Score=523.05 Aligned_cols=389 Identities=25% Similarity=0.392 Sum_probs=305.5
Q ss_pred CCCCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcc-eEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
++++|+|+||+++++ .++|+|+|+|... ++.+.|+||+.++....++.++ .+|.... ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 567899999999987 5999999999753 4578999999876554443333 3343211 24789999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 329 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~ 329 (619)
|+|+||+|||+|+|||+.+ .||+.++|+|+|.+++...+||+++||+|... ....+++.+.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~------------~~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF------------DSNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCC------------ChHHHHHHHHh
Confidence 9999999999999999963 37899999999988777789999999998652 12345666655
Q ss_pred hcCCCCEEEEcCcccccCCc----hhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeee
Q 007069 330 DLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFY 405 (619)
Q Consensus 330 ~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 405 (619)
...+||||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... .. .......+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~~----~~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---IN----ETEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---GT----BCSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---cc----ccccchhhhhhcc
Confidence 33489999999999998753 4579999999999888999999999999864210 00 0001134566788
Q ss_pred ccCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCC
Q 007069 406 VPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 482 (619)
Q Consensus 406 ~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~ 482 (619)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+ |++...+..++
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~--- 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFMEG--- 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT---
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCccccccc---
Confidence 8853 3467899999999999999999877667899999999999987777899999999999 77643211111
Q ss_pred chhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccC-C-CccccCCCCceEEEEeCCCCCCCC---CCCCCCCC
Q 007069 483 EPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK-E-KNYYKGTLNGTIHVVAGGGGAGLA---EFTPLQTT 557 (619)
Q Consensus 483 ~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~-~-~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~~ 557 (619)
..+ |+.|+++|++++||++|+||+|.|+|++|+++.+.... + ...+ .++++++||++|+||+... .+..++|+
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~-~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~ 370 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPV-KDQSAPVYITIGDAGNYGVIDSNMIQPQPE 370 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCE-ECTTSCEEEEECCSCTTSCCCCCBCSSCCT
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccc-cCCCCcEEEEecCCCCccccCccCCCCCCC
Confidence 344 88999999999999999999999999999987543211 1 1112 2467999999999998642 45567889
Q ss_pred cceeeeCcccEEEEEEecCCeEEEEEEECCCCcE--EEEEEEEeCCCCc
Q 007069 558 WSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKV--YDSFRISRDYRDI 604 (619)
Q Consensus 558 ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v--~D~f~i~k~~~~~ 604 (619)
|++|+...|||++|++.|+++|+++|+++.||++ .|+|+|.|++..-
T Consensus 371 ~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 371 YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp TEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred cceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 9999999999999999999999999999999997 5999999986543
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-34 Score=316.06 Aligned_cols=379 Identities=18% Similarity=0.223 Sum_probs=233.1
Q ss_pred CcceeeecCCC-CCcEEEEEEeCCCC-------CCCccEEEEeecCCCCcc--ccCcceEEecCCcCCCCCccccccCCC
Q 007069 176 PVYPRLAQGKT-WNEMTVTWTSGYGI-------NEAEAFVQWGRKGGDRTH--SPAGTLTFDRGSMCGAPARTVGWRDPG 245 (619)
Q Consensus 176 P~~~~La~~~~-~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~--~~~~~~t~~~~~mc~~pa~~~g~~~~g 245 (619)
|...-++.|+- ++++ |.|+.-... ......|+|....+.... ...++.+ .. -+.+
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~-a~-------------~~~~ 72 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEM-AK-------------PSLA 72 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEE-EC-------------GGGT
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEE-ec-------------CCCc
Confidence 44444566764 5666 669775321 012357777765544332 2222211 10 1247
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCC-CceEEEEEeecCCCCCCCCCcccccccchHHHH
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQN-SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTT 324 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~-~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~ 324 (619)
++|+|.|+||+|||+|+|||+.. ..+|++++|+|+|.++.. ..+||+++||.+... +..+++
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~~~ 135 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYTAY 135 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCHHH
T ss_pred eEEEeecCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccHHH
Confidence 89999999999999999999974 247899999999987653 579999999997531 112456
Q ss_pred HHHHHhcCCCCEEEEcCcccccCCch--------------------h----HHHHHH--HhhhhhhcCCCeEEccCCCcc
Q 007069 325 RQLIQDLKNIDIVFHIGDICYANGYI--------------------S----QWDQFT--AQIEPIASTVPYMIASGNHER 378 (619)
Q Consensus 325 ~~i~~~~~~pDfVl~~GDi~y~~g~~--------------------~----~wd~f~--~~i~~l~~~vP~~~v~GNHD~ 378 (619)
..|.+ .+||||||+||++|+++.. . .|..++ ..++.+.+.+|+|+++||||+
T Consensus 136 ~~ia~--~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~ 213 (527)
T 2yeq_A 136 KHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEV 213 (527)
T ss_dssp HHHTT--SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTT
T ss_pred HHHHh--cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccc
Confidence 66665 6899999999999987542 1 122222 135667788999999999999
Q ss_pred CCCCCCCCCCCCCCCCcc----ccccceee-eccC-------CCCCceEEEEEeCC-EEEEEEeCCCCCC----------
Q 007069 379 DWPGTGSFYGNKDSGGEC----GVLAETMF-YVPA-------ENRAKFWYSTDYGM-FRFCVADTEHDWR---------- 435 (619)
Q Consensus 379 ~~~~~~~~y~~~dsgge~----g~~~~~~f-~~P~-------~~~~~~~Ysfd~G~-v~fi~Ldt~~~~~---------- 435 (619)
..+............+.. ..++..+| .||. ......||+|++|+ ++||+|||+.+..
T Consensus 214 ~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~ 293 (527)
T 2yeq_A 214 ENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKP 293 (527)
T ss_dssp STTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEEC
T ss_pred cCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccc
Confidence 743111100000000000 00122223 3442 23457899999999 9999999975321
Q ss_pred ------------CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccC------CCCCCchhhHHHHHHHHHhc
Q 007069 436 ------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV------DGSFAEPMGRESLQKLWQKY 497 (619)
Q Consensus 436 ------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~------~~~~~~~~~r~~l~~ll~k~ 497 (619)
.+.+|++||+++|++ ++++|+||+.|+|+ +......+. +.--.-...|+.|+++|.++
T Consensus 294 ~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~ 369 (527)
T 2yeq_A 294 PSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSK 369 (527)
T ss_dssp CCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHT
T ss_pred ccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhccHHHHHHHHHHHHHh
Confidence 368999999999998 67899999999999 765321110 10000122389999999999
Q ss_pred CCe--EEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCC--CC--CCCCCC----CCCCCCcceeeeCccc
Q 007069 498 KVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGG--GG--AGLAEF----TPLQTTWSLYRDYDYG 567 (619)
Q Consensus 498 ~Vd--lvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~--gG--~~l~~~----~~~~~~ws~~~~~~~G 567 (619)
+|+ ++|+||+|.+++.....+.. ... ....++-+++++. +| ..+... ...+ ++..|.+...|
T Consensus 370 ~v~n~vvLsGDvH~~~~~~~~~~~~---~p~----~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~n-p~~~~~~~~~G 441 (527)
T 2yeq_A 370 NLNNVVVLTGDVHASWASNLHVDFE---KTS----SKIFGAEFVGTSITSGGNGADKRADTDQILKEN-PHIQFFNDYRG 441 (527)
T ss_dssp TCCCEEEEECSSSSEEEEEEESSTT---CTT----SCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHC-TTEEEEEBCEE
T ss_pred CCCCEEEEEcchHHHhHhhcccccc---CCC----CCceEEEEEcCCeeCCCCcccchhhhhhhhhcC-CcceeeeCCCC
Confidence 994 99999999999986321110 000 0001333333322 11 111000 0011 23345557899
Q ss_pred EEEEEEecCCeEEEEEEE-----CCCCc--EEEEEEEEeCC
Q 007069 568 FVKLTAFDHSNLLFEYKK-----SSDGK--VYDSFRISRDY 601 (619)
Q Consensus 568 y~~l~v~n~~~l~~~~~~-----~~dG~--v~D~f~i~k~~ 601 (619)
|.+|++ +.+.++++|+. +.++. ..-+|++....
T Consensus 442 y~~v~v-t~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~g~ 481 (527)
T 2yeq_A 442 YVRCTV-TPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQ 481 (527)
T ss_dssp EEEEEE-ETTEEEEEEEEESCSSSSCCCCEEEEEEEECSST
T ss_pred EEEEEE-eccEEEEEEEEeCCccCCCCcceeeeEEEEeCCC
Confidence 999999 78999999885 23333 44456665443
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=305.07 Aligned_cols=264 Identities=19% Similarity=0.291 Sum_probs=186.9
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCc----hhHHHHHHHhh-hhh--hc
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQI-EPI--AS 365 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i-~~l--~~ 365 (619)
.+||+++||+|.+.. .|......+.+++++ .+|||||++||++|. |. ..+|.+.++.+ +.+ ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997521 233233444455543 789999999999998 54 45565443332 322 34
Q ss_pred CCCeEEccCCCccCCCCCC------CCCCCCC----CCCccccccceeeeccCCCCCceEEEE----Ee---------C-
Q 007069 366 TVPYMIASGNHERDWPGTG------SFYGNKD----SGGECGVLAETMFYVPAENRAKFWYST----DY---------G- 421 (619)
Q Consensus 366 ~vP~~~v~GNHD~~~~~~~------~~y~~~d----sgge~g~~~~~~f~~P~~~~~~~~Ysf----d~---------G- 421 (619)
.+|+++++||||+...... ..|...+ ...........||.||. .||++ .. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998642110 0010000 00000122357899984 46654 32 3
Q ss_pred ---CEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHH
Q 007069 422 ---MFRFCVADTEHDWR----------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRE 488 (619)
Q Consensus 422 ---~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~ 488 (619)
.++||+|||..... ...+|++||+++|++ .+|+||++|||+ |+++.+ + . ...+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~---~-~~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-R---G-SSYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-C---C-CHHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-C---C-cHHH-HH
Confidence 39999999974321 125899999999943 479999999999 887532 1 1 1233 88
Q ss_pred HHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccE
Q 007069 489 SLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGF 568 (619)
Q Consensus 489 ~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy 568 (619)
.|+++|++|+||++|+||+|.|+|.++ ++++||++|+||...... ...++|+.|+...+||
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~------------------~g~~~iv~Ga~g~~~~~~-~~~~~~s~f~~~~~Gf 276 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED------------------NDMAHITCGSGSMSQGKS-GMKNSKSLFFSSDIGF 276 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE------------------TTEEEEEECCSSCCCCCC-SSCCTTEEEEECSSEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee------------------CCcEEEEeCccccccccC-CCCCCcceeecCCCcE
Confidence 999999999999999999999999873 468999999988765322 1346799999999999
Q ss_pred EEEEEecCCeEEEEEEECCCCcEEEEEEEEeCCCC
Q 007069 569 VKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRD 603 (619)
Q Consensus 569 ~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~ 603 (619)
.++++ +++.|+++|+.+.+|+++|+|+|.|+.+-
T Consensus 277 ~~l~v-~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 277 CVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp EEEEE-ETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred EEEEE-ECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 99999 78999999996699999999999997764
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-30 Score=263.87 Aligned_cols=264 Identities=20% Similarity=0.274 Sum_probs=177.2
Q ss_pred CceEEEEEeecCCCCCCCCCcccc-cccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHH-HHHHhhhhhh-----
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYND-FQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA----- 364 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~-~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd-~f~~~i~~l~----- 364 (619)
..+||+++||+|...... |.. .+......+.+++++ .+|||||++||++|..|....++ +|.+.++.+.
T Consensus 5 ~~~~~~~isD~h~~~~~~---~~~~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAP---FHTAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTT---SSCHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCcc---ccCchHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhh
Confidence 359999999999874321 110 011122334444433 58999999999998765432222 3444444432
Q ss_pred cCCCeEEccCCCccCCCCCCC-CCCCCCCCCccccccceeeeccCCCCCceEEEEEe------CCEEEEEEeCCCC----
Q 007069 365 STVPYMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY------GMFRFCVADTEHD---- 433 (619)
Q Consensus 365 ~~vP~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~---- 433 (619)
..+|+++++||||+....... -|. ....+|.+| ..||++++ ++++||+||+...
T Consensus 81 ~~~p~~~v~GNHD~~~~~~~~~~~~----------~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~ 145 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNVSAQIAYS----------KISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNS 145 (313)
T ss_dssp TTCCEEECCCHHHHHSCHHHHHHGG----------GTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCG
T ss_pred cCCCEEEECCCCccCCCcccccccc----------ccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcC
Confidence 279999999999985311000 010 012345555 34788888 5899999998641
Q ss_pred -------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCe
Q 007069 434 -------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD 500 (619)
Q Consensus 434 -------------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd 500 (619)
...+.+|++||++.|++. +.+|+|+++|+|+ ++.... +. ...+ ++.|.++|.+++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~----~~-~~~~-~~~l~~~l~~~~v~ 215 (313)
T 1ute_A 146 DDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH----GP-THCL-VKQLLPLLTTHKVT 215 (313)
T ss_dssp GGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS----CC-CHHH-HHHTHHHHHHTTCS
T ss_pred ccccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC----CC-cHHH-HHHHHHHHHHcCCc
Confidence 012479999999999985 3589999999999 765431 11 1223 78899999999999
Q ss_pred EEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC---CCCCCcceeeeC----cccEEEEEE
Q 007069 501 IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT---PLQTTWSLYRDY----DYGFVKLTA 573 (619)
Q Consensus 501 lvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~---~~~~~ws~~~~~----~~Gy~~l~v 573 (619)
++|+||+|.+++..+ .+|+.||++|++|....... ....++..|... .+||.+|++
T Consensus 216 ~~l~GH~H~~~~~~~-----------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v 278 (313)
T 1ute_A 216 AYLCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI 278 (313)
T ss_dssp EEEECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE
T ss_pred EEEECChhhhhhccC-----------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE
Confidence 999999999998852 25789999999886421110 011234445433 389999999
Q ss_pred ecCCeEEEEEEECCCCcEEEEEEEEeCCCC
Q 007069 574 FDHSNLLFEYKKSSDGKVYDSFRISRDYRD 603 (619)
Q Consensus 574 ~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~ 603 (619)
+++.++++|+ +.+|+++|+|+|.|..+.
T Consensus 279 -~~~~~~~~~~-~~~g~~~~~~~l~~~~~~ 306 (313)
T 1ute_A 279 -TPKEMSVTYI-EASGKSLFKTKLPRRARS 306 (313)
T ss_dssp -CSSCEEEEEE-ETTSCEEEEEEECCCC--
T ss_pred -EcCEEEEEEE-cCCCcEEEEEEeccccCc
Confidence 7789999998 469999999999997643
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-22 Score=207.35 Aligned_cols=250 Identities=16% Similarity=0.132 Sum_probs=161.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 365 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~- 365 (619)
...+||++++|+|...... ..+... .....++++++. ..++|+||++||+++ .+....|+.+.+.++++..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~-~~~~~~--~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR-RLYGAV--DADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC-CBTTTB--CHHHHHHHHHHHHHHHTCCCSEEEECSCCBT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCc-cccccc--CHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHHhh
Confidence 3469999999999865321 111111 122334444433 258999999999995 4555677777777777643
Q ss_pred -CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHH
Q 007069 366 -TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQ 440 (619)
Q Consensus 366 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q 440 (619)
.+|+++++||||+... + ...+.-........+|+++.++++|++||+.... ....+|
T Consensus 99 ~~~pv~~v~GNHD~~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRAE----L--------------RKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHHH----H--------------HHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHHH----H--------------HHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHH
Confidence 7899999999997310 0 0001000111235678999999999999998632 246899
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccce
Q 007069 441 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI 520 (619)
Q Consensus 441 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~ 520 (619)
++||++.|++.. +.+ +|+++|||+ +......... . ....++.|.+++++++|+++|+||+|..+...
T Consensus 161 ~~wl~~~l~~~~--~~~-~iv~~Hh~p-~~~~~~~~~~--~-~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------ 227 (330)
T 3ib7_A 161 LGWLAEELATPA--PDG-TILALHHPP-IPSVLDMAVT--V-ELRDQAALGRVLRGTDVRAILAGHLHYSTNAT------ 227 (330)
T ss_dssp HHHHHHHTTSCC--TTC-EEEECSSCS-SCCSSGGGGG--G-SBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE------
T ss_pred HHHHHHHHHhcc--cCC-eEEEEECCC-CCCCcccccc--c-cccCHHHHHHHHhccCceEEEECCCCCcccce------
Confidence 999999999853 233 788888887 5542211110 1 11126789999999999999999999987542
Q ss_pred eccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc
Q 007069 521 CTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK 590 (619)
Q Consensus 521 ~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~ 590 (619)
.+++.+++.|+.+...... .............||..+++ +++.+.++++.-..+.
T Consensus 228 ------------~~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i-~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------------FVGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ------------ETTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEE-CSSCEEEEEEECSCCC
T ss_pred ------------ECCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEE-ECCCeEEEEeccCCCC
Confidence 2467778888766432111 01111222345678999999 6788899988644433
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-21 Score=195.68 Aligned_cols=243 Identities=12% Similarity=0.074 Sum_probs=153.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
+||++++|+|...... ..+.. ......++++++. .+++|+||++||+++ .+...+|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~~-~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRGE-KLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTTC-CBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhc--CCCE
Confidence 5899999999874321 11110 1112334444433 236899999999996 44456677777777665 6899
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCC-CceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHH
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR-AKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFI 444 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL 444 (619)
++++||||...... . .+...| ++.... +..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~~~-~-------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKALFL-E-------------YLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHHHH-H-------------HHGGGS-GGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHHHH-H-------------Hhhhhh-cCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 99999999741100 0 000001 111111 23568899999999999997532 2468999999
Q ss_pred HHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceecc
Q 007069 445 EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTN 523 (619)
Q Consensus 445 ~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~ 523 (619)
++.|++. +..++|+++|+|+ +....... +. .. ...++.+.++++++ +|+++|+||+|.++...
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~-~~-~~-~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------- 203 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQM-DP-IA-CENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------- 203 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTT-GG-GS-BTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE---------
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCccc-Cc-cc-CcCHHHHHHHHHhCCCceEEEeCCCCCchhhe---------
Confidence 9999985 3457999999998 65432111 10 00 11256899999998 89999999999987653
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCc-ceeeeCcccEEEEEEecCCeEEEEEEEC
Q 007069 524 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTW-SLYRDYDYGFVKLTAFDHSNLLFEYKKS 586 (619)
Q Consensus 524 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w-s~~~~~~~Gy~~l~v~n~~~l~~~~~~~ 586 (619)
.++..++++++.+.... +. .+.+ +.+.....||..+++ +++.++++++.-
T Consensus 204 ---------~~g~~~~~~pg~~~~~~-~~--~~~~~~~~~~~~~gy~i~~i-~~~~~~~~~~~~ 254 (274)
T 3d03_A 204 ---------YRQALISTLPGTVHQVP-YC--HADTDPYYDLSPASCLMHRQ-VGEQWVSYQHSL 254 (274)
T ss_dssp ---------ETTEEEEECCCSSCBCC-CC--SSCCSCEEBCCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred ---------ECCEEEEEcCCcceeec-cC--CCccccccccCCCceEEEEE-eCCcEEEEEEec
Confidence 13444555554332211 11 1122 234456689999999 667898888753
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=199.52 Aligned_cols=250 Identities=15% Similarity=0.153 Sum_probs=151.0
Q ss_pred CceEEEEEeecCCCCCCCCCccc----ccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCc-----hhHHHHHHHhh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQI 360 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~-----~~~wd~f~~~i 360 (619)
..+||++++|+|.........+. .+.......++++++.. .+||+||++||+++.... ...|+.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 35999999999987643211000 11112234444444432 689999999999965321 22333444444
Q ss_pred hhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEe-CCEEEEEEeCCCC------
Q 007069 361 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHD------ 433 (619)
Q Consensus 361 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~------ 433 (619)
+.+ .+|+++++||||...-....+.......... ........+|. .+..||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR-TGTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCcccc-cccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 6899999999998310000010000000000 00000111332 2456899998 9999999999652
Q ss_pred -------------------C---------------------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCc
Q 007069 434 -------------------W---------------------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI 473 (619)
Q Consensus 434 -------------------~---------------------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~ 473 (619)
| ....+|++||+++|+++.+. ..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC-CCCCC
Confidence 0 12379999999999986422 346899999998 65532
Q ss_pred cccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC
Q 007069 474 FYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT 552 (619)
Q Consensus 474 ~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 552 (619)
.. .. ....++.+.+++.++ +|+++|+||+|.+++... .+|+.|++.|+.-. .
T Consensus 237 ~~---~~--~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-----------------~~g~~~i~~~~~~~----~- 289 (322)
T 2nxf_A 237 DP---IC--LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-----------------SSGAQHITLEGVIE----T- 289 (322)
T ss_dssp CG---GG--SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-----------------TTSCEEEECCCGGG----C-
T ss_pred Cc---cc--cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-----------------cCCceEEEecchhh----C-
Confidence 10 00 111267899999999 799999999999988641 24667777765411 0
Q ss_pred CCCCCcceeeeCcccEEEEEEecCCeEEEEEEE
Q 007069 553 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 585 (619)
Q Consensus 553 ~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 585 (619)
.....||..+++ +++.+.++.+.
T Consensus 290 ---------~~~~~~y~~v~~-~~~~~~~~~~~ 312 (322)
T 2nxf_A 290 ---------PPHSHAFATAYL-YEDRMVMKGRG 312 (322)
T ss_dssp ---------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred ---------CCCCCcEEEEEE-ECCeEEEEecc
Confidence 123468999998 67888888664
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-16 Score=172.35 Aligned_cols=216 Identities=12% Similarity=0.148 Sum_probs=126.8
Q ss_pred CCceEEEEEeecCCCCCCC---CCccccc---c-----cchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHH
Q 007069 291 NSLQRVVIFGDMGKDEADG---SNEYNDF---Q-----YASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFT 357 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~---~~~~~~~---~-----~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~ 357 (619)
+..+||++++|+|...... ...+..+ . ......++++++. ..+||+||++||+++. +....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 3469999999999863210 0000000 0 0123344444433 2579999999999954 4445566666
Q ss_pred Hhhhhhhc-CCCeEEccCCCccCCCCCCCCCCCCC-CC-Ccc-ccccceeeeccC-------CCCCceEEEEEeCCEEEE
Q 007069 358 AQIEPIAS-TVPYMIASGNHERDWPGTGSFYGNKD-SG-GEC-GVLAETMFYVPA-------ENRAKFWYSTDYGMFRFC 426 (619)
Q Consensus 358 ~~i~~l~~-~vP~~~v~GNHD~~~~~~~~~y~~~d-sg-ge~-g~~~~~~f~~P~-------~~~~~~~Ysfd~G~v~fi 426 (619)
+.++.+.. .+|+++++||||+....... +.... .. ... ...+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 66666543 78999999999986422110 00000 00 000 000111111000 001233444568899999
Q ss_pred EEeCCCC------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHH
Q 007069 427 VADTEHD------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLW 494 (619)
Q Consensus 427 ~Ldt~~~------------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll 494 (619)
+||+... .....+|++||++.|+++.. +...+|+++|+|+ +....... ...... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~-~~~~~~~~--~~~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNL-TDHNDVIQ--KGYTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBS-SCSSCC----CCSBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCC-cccccccc--cccccc-cHHHHHHHH
Confidence 9999753 12458999999999988642 2345899999998 55422111 111111 267899999
Q ss_pred HhcCCeEEEecCcccceee
Q 007069 495 QKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 495 ~k~~Vdlvl~GH~H~YeRt 513 (619)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997764
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.48 E-value=7.1e-13 Score=130.07 Aligned_cols=173 Identities=12% Similarity=0.117 Sum_probs=98.1
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.+||+++||+|.+. ..++++++.. .++|+|+++||+++......++.++++.++.+ .+|++
T Consensus 5 ~mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~ 67 (228)
T 1uf3_A 5 VRYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTA 67 (228)
T ss_dssp CCEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEE
T ss_pred eEEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEE
Confidence 37999999999652 1233333322 38999999999996542444455566665543 67999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeC-CEEEEEEeCCC--CCCCC--------HH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG-MFRFCVADTEH--DWREG--------TE 439 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G-~v~fi~Ldt~~--~~~~~--------~~ 439 (619)
+++||||.... .++... .+.+ ..+.....+. +. .+.++ +++|+.++... .+... ..
T Consensus 68 ~v~GNHD~~~~---~~~~~~-~~~~--~~~~~~~~l~-----~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T 1uf3_A 68 YVPGPQDAPIW---EYLREA-ANVE--LVHPEMRNVH-----ET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp EECCTTSCSHH---HHHHHH-HHHH--HHCTTEEECB-----TS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred EECCCCCchhH---HHHHhh-hhhh--ccCcceEEcc-----cc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhh
Confidence 99999997420 000000 0000 0000001110 11 24455 78888887421 11111 12
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007069 440 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 508 (619)
Q Consensus 440 Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H 508 (619)
+.+|+++.|++.. ..+.|++.|+|+ +..... ..+.+.+..++++++++++++||+|
T Consensus 135 ~~~~~~~~l~~~~---~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 135 VAEYRLKALWELK---DYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHGGGGGSC---SCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hHHHHHHHHHhCC---CCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 2344455555532 235899999998 543110 1113467788888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.38 E-value=9e-12 Score=125.20 Aligned_cols=183 Identities=11% Similarity=0.078 Sum_probs=95.0
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhH---------------H----
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ---------------W---- 353 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~---------------w---- 353 (619)
.+||+++||+|.+.. .....++.+.+ .++|+|+++||+++....... +
T Consensus 5 ~mri~~iSDlH~~~~-----------~~~~~l~~~~~--~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD-----------LLPKLKGVIAE--KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CCEEEEEECCTTCGG-----------GHHHHHHHHHH--HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred eEEEEEEeecCCChH-----------HHHHHHHHHHh--cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHH
Confidence 479999999997531 11122333322 589999999999954321100 0
Q ss_pred ----HHHHHhhhhhhc-CCCeEEccCCCccCCCCC-CCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEE
Q 007069 354 ----DQFTAQIEPIAS-TVPYMIASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 427 (619)
Q Consensus 354 ----d~f~~~i~~l~~-~vP~~~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 427 (619)
+.+.+.++.+.. .+|+++++||||...... ...+. .. +. +.....+ .+. ..+++++++|+.
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~--~~----~~-~~~~~~l-----~~~-~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYE--AE----TA-YPNIRVL-----HEG-FAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHH--TT----TT-CTTEEEC-----SSE-EEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhh--hc----cC-CcceEEe-----cCc-ceEEECCEEEEe
Confidence 122233333333 589999999999742100 00000 00 00 0000001 111 236778999999
Q ss_pred EeCCCCC-CCCHHHHH----HHH----HHHhhccCCCCCeEEEEeeccccCCCC-ccccCCCCCCchhhHHHHHHHHHhc
Q 007069 428 ADTEHDW-REGTEQYK----FIE----HCLASVDRQKQPWLIFLAHRVLGYSSG-IFYAVDGSFAEPMGRESLQKLWQKY 497 (619)
Q Consensus 428 Ldt~~~~-~~~~~Q~~----WL~----~~L~~~~r~~~pw~Iv~~H~P~~yss~-~~~~~~~~~~~~~~r~~l~~ll~k~ 497 (619)
++..... ....+|.. |+. +.|++. .+ ...|++.|+|+ +... ....... ...+.+.+..++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~-~~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL--KP-RRLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS--CC-CEEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc--CC-CCEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 8743210 00112221 433 334432 12 34688999998 5431 1100000 111245788888899
Q ss_pred CCeEEEecCcc
Q 007069 498 KVDIAIYGHVH 508 (619)
Q Consensus 498 ~Vdlvl~GH~H 508 (619)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.32 E-value=9.6e-12 Score=130.69 Aligned_cols=259 Identities=12% Similarity=0.078 Sum_probs=125.5
Q ss_pred CceEEEEEeecCCCCCCCCCccccc--ccchHHHHHHHHHhc--CCCCEEEEcCc-ccccCCchh--HHHHHHHhhhhhh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDF--QYASLNTTRQLIQDL--KNIDIVFHIGD-ICYANGYIS--QWDQFTAQIEPIA 364 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~--~~~s~~~~~~i~~~~--~~pDfVl~~GD-i~y~~g~~~--~wd~f~~~i~~l~ 364 (619)
..+||++++|+|.+.... ..+... .......++++++.. .++|+|+++|| ++ +.+... ....+.+.++.+.
T Consensus 17 ~~mrilh~SD~HlG~~~~-~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSW-TSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CEEEEEEEECCCBTCEEC-TTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCcc-ccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHH
Confidence 359999999999762100 000000 011123455554432 57999999999 66 444322 2334555555554
Q ss_pred cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC-------CCC
Q 007069 365 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW-------REG 437 (619)
Q Consensus 365 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-------~~~ 437 (619)
..+|+++++||||... . ..+. +.-......+.+-.+......+.++.+++.|+.++..... ...
T Consensus 95 ~~~pv~~i~GNHD~~~-~--~~~~------~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~ 165 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L--KLFG------NFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDF 165 (336)
T ss_dssp HHSCEEECCC-------C--HHHH------HHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHH
T ss_pred hcCCEEEECCCCCccc-c--ccHH------HHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHH
Confidence 3389999999999753 1 1000 0000000001111110000011222356888888643221 112
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccc
Q 007069 438 TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIY 517 (619)
Q Consensus 438 ~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~ 517 (619)
.+|.+|+.+.|...-+....+.|+++|.|+ +..... ..+..... ..+...+.+.++|++++||.|..+...
T Consensus 166 ~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~----~~v~~~l~~~~~d~v~~GH~H~~~~~~--- 236 (336)
T 2q8u_A 166 RFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGRE----IIINRALIPSVVDYAALGHIHSFREIQ--- 236 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CC----CEECGGGSCTTSSEEEEESCSSCEEEE---
T ss_pred HHHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhh----cccCHHHccccCCEEEEccccCceEeC---
Confidence 467889988886521013457999999998 543110 00000000 001112335689999999999987652
Q ss_pred cceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007069 518 QNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 597 (619)
Q Consensus 518 ~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i 597 (619)
. .+..+.+|+... .. ++.. ....||..+++.++..+.++++.-.. +.+-++.+
T Consensus 237 ~----------------~~~i~y~GS~~~--~s-------~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r~~~~~~~ 289 (336)
T 2q8u_A 237 K----------------QPLTIYPGSLIR--ID-------FGEE-ADEKGAVFVELKRGEPPRYERIDASP-LPLKTLYY 289 (336)
T ss_dssp E----------------TTEEEECCCSSC--CS-------GGGT-TCCCEEEEEEEETTSCCEEEEEECCC-CCEEEEEE
T ss_pred C----------------CccEEECCCCcC--CC-------cccc-CCCCEEEEEEEeCCCccEEEEEECCC-EEEEEeec
Confidence 0 111223443211 11 1110 12468999998544467888886444 66666555
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-10 Score=109.09 Aligned_cols=165 Identities=18% Similarity=0.218 Sum_probs=107.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC-CCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~-~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999942 123455555433 79999999998421 2333332 99999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 452 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 452 (619)
+||||... .+|. ...+..
T Consensus 58 ~GNhD~~~------------------------~~p~------~~~~~~-------------------------------- 75 (176)
T 3ck2_A 58 KGNMDFYA------------------------GYPE------RLVTEL-------------------------------- 75 (176)
T ss_dssp CCTTCCST------------------------TCCS------EEEEEE--------------------------------
T ss_pred cCcccchh------------------------cCCc------EEEEEE--------------------------------
Confidence 99999631 0110 000110
Q ss_pred CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCC
Q 007069 453 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 532 (619)
Q Consensus 453 r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~ 532 (619)
..+.|++.|.|+ +... . ..+.+..+++++++|++++||+|......
T Consensus 76 ---~~~~i~~~Hg~~-~~~~-----~-------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 121 (176)
T 3ck2_A 76 ---GSTKIIQTHGHL-FDIN-----F-------NFQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 121 (176)
T ss_dssp ---TTEEEEEECSGG-GTTT-----T-------CSHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred ---CCeEEEEECCCc-cCCC-----C-------CHHHHHHHHHhcCCCEEEECCcCCCCcEE------------------
Confidence 124788899887 5321 0 13467778888999999999999865421
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007069 533 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 597 (619)
Q Consensus 533 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i 597 (619)
.+++.++..|+.|..... ....+|..+++ ++..+.++++ ..+|+++.+++.
T Consensus 122 ~~~~~~inpGs~~~~~~~------------~~~~~y~il~~-~~~~~~v~~~-~~~~~~~~~~~~ 172 (176)
T 3ck2_A 122 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVYPGLSK 172 (176)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBCTTCCE
T ss_pred ECCEEEEECCCCCcCCCC------------CCCCeEEEEEE-cCCEEEEEEE-EECCEEcchhhc
Confidence 146777888877653210 11358999998 6678999987 567887775443
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.25 E-value=6.3e-10 Score=107.35 Aligned_cols=181 Identities=16% Similarity=0.234 Sum_probs=110.5
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
-+||+++||+|...... .....+.+++++ .++|+|+++||++. .+.++.++.+ ..|++.+
T Consensus 10 mm~i~~iSD~H~~~~~~---------~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v 69 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCN---------SLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIV 69 (192)
T ss_dssp -CEEEEECCCCBTTTCS---------SCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEEC
T ss_pred ceEEEEEecCCCCccch---------hHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEE
Confidence 37999999999753210 011233333332 57999999999983 2233344433 3589999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 452 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 452 (619)
+||||... .+|. ...++.
T Consensus 70 ~GNhD~~~------------------------~lp~------~~~~~~-------------------------------- 87 (192)
T 1z2w_A 70 RGDFDENL------------------------NYPE------QKVVTV-------------------------------- 87 (192)
T ss_dssp CCTTCCCT------------------------TSCS------EEEEEE--------------------------------
T ss_pred cCCcCccc------------------------cCCc------ceEEEE--------------------------------
Confidence 99999741 0110 111111
Q ss_pred CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCC
Q 007069 453 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 532 (619)
Q Consensus 453 r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~ 532 (619)
..+.|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 88 ---~~~~i~l~Hg~~-~~~--~----~------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 133 (192)
T 1z2w_A 88 ---GQFKIGLIHGHQ-VIP--W----G------DMASLALLQRQFDVDILISGHTHKFEAFE------------------ 133 (192)
T ss_dssp ---TTEEEEEECSCC-CCB--T----T------CHHHHHHHHHHHSSSEEECCSSCCCEEEE------------------
T ss_pred ---CCEEEEEECCCc-CCC--C----C------CHHHHHHHHHhcCCCEEEECCcCcCccEe------------------
Confidence 135788888554 322 1 0 14567778888899999999999864321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007069 533 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 599 (619)
Q Consensus 533 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 599 (619)
.+++.++..|+.+....+. . .....+|..+++ ++..+.++++.-..++ .+.++++.|
T Consensus 134 ~~~~~~inpGS~~~~~~~~-------~--~~~~~~y~il~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 134 HENKFYINPGSATGAYNAL-------E--TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp ETTEEEEECCCTTCCCCSS-------C--SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ECCEEEEECCcccccCCCC-------C--cCCCCcEEEEEE-ECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 1467778888776532111 0 123468999998 6678999888655555 466666665
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-11 Score=120.59 Aligned_cols=214 Identities=9% Similarity=0.003 Sum_probs=109.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHH---HhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI---QDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~---~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.|++++||+|... ......++.+. +...++|+|+++||++....... +..+.++.+....|++
T Consensus 2 m~i~~isD~H~~~-----------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~~~~ 67 (252)
T 1nnw_A 2 VYVAVLANIAGNL-----------PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKENVK 67 (252)
T ss_dssp CEEEEEECCTTCH-----------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHSCEE
T ss_pred cEEEEEeecCCCH-----------HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhcCee
Confidence 5899999999531 11112222222 21017999999999995432222 3344444443336899
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKFIEHC 447 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~WL~~~ 447 (619)
.++||||........ .++ .+... .. ++..... ... ..| ....+|++||++.
T Consensus 68 ~v~GNhD~~~~~~~~---------~~~-~~~~~--~~----------~~~~~~~---~~~-~~~~~~~l~~~~~~~L~~l 121 (252)
T 1nnw_A 68 IIRGKYDQIIAMSDP---------HAT-DPGYI--DK----------LELPGHV---KKA-LKFTWEKLGHEGREYLRDL 121 (252)
T ss_dssp EECCHHHHHHHHSCT---------TCS-SSGGG--GG----------SSCCHHH---HHH-HHHHHHHHHHHHHHHHHTS
T ss_pred EEecchHHHhhcccc---------ccC-Ccccc--cc----------hhhhHHH---HHH-HHHHHHHCCHHHHHHHHhC
Confidence 999999964211000 000 00000 00 0000000 000 000 1135788898763
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceeccCCC
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEK 526 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~ 526 (619)
.......-....|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|......
T Consensus 122 p~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~------------ 183 (252)
T 1nnw_A 122 PIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM------------ 183 (252)
T ss_dssp CSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE------------
T ss_pred CceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccceEe------------
Confidence 32221111224677888876 33211000 1 111146788888888 99999999999865432
Q ss_pred ccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEE
Q 007069 527 NYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 584 (619)
Q Consensus 527 ~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 584 (619)
.++++++..|+.|..... +...+|+.+++ ++..+.++.+
T Consensus 184 ------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~-~~~~v~~~~v 222 (252)
T 1nnw_A 184 ------TRYGRVVCPGSVGFPPGK------------EHKATFALVDV-DTLKPKFIEV 222 (252)
T ss_dssp ------ETTEEEEEECCSSSCSSS------------SCCEEEEEEET-TTCCEEEEEE
T ss_pred ------cCCeEEEECCCccCCCCC------------CCcceEEEEEC-CCCeEEEEEe
Confidence 146778888887754210 12346888876 4445554433
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.8e-10 Score=111.97 Aligned_cols=190 Identities=20% Similarity=0.273 Sum_probs=111.7
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.+|++++||+|.+.... . . ...+.++++ ..++|+|+++||++. .+.++.++.+ ..|++.+
T Consensus 25 ~m~i~~iSD~H~~~~~~--~---l----~~~l~~~~~-~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK--E---L----PSNFRELLA-TDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTCS--S---C----CGGGHHHHH-CTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCChH--H---H----HHHHHHHHh-cCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 47999999999753210 0 1 123444444 267999999999994 2334444443 3589999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 452 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 452 (619)
+||||..... +. ..+.. .+|. .. ..
T Consensus 85 ~GNHD~~~~~----~~---------~~~~~--~lp~------~~---------------------------------~~- 109 (215)
T 2a22_A 85 SGDLDSAIFN----PD---------PESNG--VFPE------YV---------------------------------VV- 109 (215)
T ss_dssp CCTTCCSCCB----CC---------GGGTB--CCCS------EE---------------------------------EE-
T ss_pred cCCCcCcccc----cC---------hhhHh--hCCc------eE---------------------------------EE-
Confidence 9999975211 00 00000 0000 00 00
Q ss_pred CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCC
Q 007069 453 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 532 (619)
Q Consensus 453 r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~ 532 (619)
....++|++.|.++ +... . ..+.+..++++.++|++++||+|......
T Consensus 110 -~~~~~~i~l~Hg~~-~~~~------~------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~------------------ 157 (215)
T 2a22_A 110 -QIGEFKIGLMHGNQ-VLPW------D------DPGSLEQWQRRLDCDILVTGHTHKLRVFE------------------ 157 (215)
T ss_dssp -EETTEEEEEECSTT-SSST------T------CHHHHHHHHHHHTCSEEEECSSCCCEEEE------------------
T ss_pred -ecCCeEEEEEcCCc-cCCC------C------CHHHHHHHHhhcCCCEEEECCcCCCccEe------------------
Confidence 01235788888654 3221 0 14567778888899999999999864321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007069 533 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 599 (619)
Q Consensus 533 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 599 (619)
.+++.++..|+.+....+.. .....+|..+++ ++..+.++++.-.+|+ .+.+..+.|
T Consensus 158 ~~~~~~inpGS~~~~~~~~~---------~~~~~~y~il~i-~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 KNGKLFLNPGTATGAFSALT---------PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp ETTEEEEECCCSSCCCCTTS---------TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred eCCEEEEECCcccccCCCCC---------CCCCCcEEEEEE-eCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 14677788887765321100 123468999998 6678889888655565 355555543
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-10 Score=120.26 Aligned_cols=208 Identities=14% Similarity=0.109 Sum_probs=111.6
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
...+||++++|+|.... . + +..++|+||++||+++ .|...+++.+.+.++.+. ..|++
T Consensus 57 ~~~mri~~iSD~H~~~~-----------~----l-----~i~~~D~vi~aGDl~~-~g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTD-----------G----I-----QMPYGDILLHTGDFTE-LGLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TTEEEEEEEBCCTTCCT-----------T----C-----CCCSCSEEEECSCCSS-SCCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCCeEEEEEeeCCCCcc-----------h----h-----ccCCCCEEEECCcccC-CCCHHHHHHHHHHHHhCC-CCeEE
Confidence 34589999999997531 0 1 2368999999999995 455555666666666542 34689
Q ss_pred EccCCCccCCCCCCCCCCCC--CCCCcc----ccc---cceeeeccCCC--CCceEEEEEeCCEEEEEEeCCCCCCCC--
Q 007069 371 IASGNHERDWPGTGSFYGNK--DSGGEC----GVL---AETMFYVPAEN--RAKFWYSTDYGMFRFCVADTEHDWREG-- 437 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~--dsgge~----g~~---~~~~f~~P~~~--~~~~~Ysfd~G~v~fi~Ldt~~~~~~~-- 437 (619)
+++||||+.... .++... ...... ... +...-.++.+. ..+ -+..+++++|++..-...+...
T Consensus 115 ~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f 190 (296)
T 3rl5_A 115 VIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWGF 190 (296)
T ss_dssp ECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCTT
T ss_pred EEcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcCC
Confidence 999999985321 111000 000000 000 00000001000 011 1356788999884432211111
Q ss_pred -HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHH-HhcCCeEEEecCcccceeeec
Q 007069 438 -TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLW-QKYKVDIAIYGHVHNYERTCP 515 (619)
Q Consensus 438 -~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll-~k~~Vdlvl~GH~H~YeRt~p 515 (619)
.++.+++.+..... .....|++.|.|+ |......... ....+.+.|...+ ++++++++++||+|......
T Consensus 191 ~~~~~~~~~~~~~~i---p~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~- 262 (296)
T 3rl5_A 191 NLPRGQSLLDKWNLI---PEGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM- 262 (296)
T ss_dssp BCCTTHHHHHHHTTS---CTTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-
T ss_pred CcchHHHHHHHHhhC---CCCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-
Confidence 12222333333333 2234689999998 7653221000 1122345677776 68999999999999743221
Q ss_pred cccceeccCCCccccCCCCceEEEEeCCCCCCC
Q 007069 516 IYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL 548 (619)
Q Consensus 516 ~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l 548 (619)
..+++++|-.|+-|...
T Consensus 263 ----------------~~g~t~vvNpGs~~~~~ 279 (296)
T 3rl5_A 263 ----------------TDGYTTYINASTCTVSF 279 (296)
T ss_dssp ----------------ECSSCEEEECBCSCTTS
T ss_pred ----------------EECCEEEEECCcCCcCc
Confidence 01467788888777654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.03 E-value=1.2e-09 Score=116.68 Aligned_cols=202 Identities=13% Similarity=0.218 Sum_probs=101.0
Q ss_pred eEEEEEeecCCCCCCCCCcccc-cccchHHHHHHHHHh--cCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhhcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYND-FQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~-~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~vP 368 (619)
+||++++|+|.+.......+.. ........++++++. ..+||+||++||++++.+. ...+..+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 5899999999875310000000 001122344555432 2589999999999944332 2334455555655543489
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEE--eC-CEEEEEEeCCCCCC----CCHHHH
Q 007069 369 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTD--YG-MFRFCVADTEHDWR----EGTEQY 441 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd--~G-~v~fi~Ldt~~~~~----~~~~Q~ 441 (619)
+++++||||.... ..+.... .. .+-...+ .. .... +.+. .| .+.|+.+.-..... .+.++.
T Consensus 81 v~~i~GNHD~~~~---~~~~~~~--~~--~~~~~~~-~~---~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~ 148 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLFGNFV--TS--ISSDITF-VM---SFEP-VDVEAKRGQKVRILPFPYPDESEALRKNEGDFR 148 (379)
T ss_dssp EEECCCTTSCTTH---HHHHHHH--HT--TCSSEEE-CC---SSCC-EEEECTTCCEEEEEEECCCCCC----CHHHHHH
T ss_pred EEEEcCCCccccC---ccccccc--cc--cCCccee-ec---ccce-EEEEcCCCCEEEEEECCCCCHHHHhhhhccchH
Confidence 9999999995310 0000000 00 0000000 00 0011 2222 23 46777665332111 135678
Q ss_pred HHHHHHHhhc---cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 442 KFIEHCLASV---DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 442 ~WL~~~L~~~---~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
+|+.+.|++. ......+.|+++|.++ .........+.... ..+...+...++|+++.||.|..+..
T Consensus 149 ~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 149 FFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 9999988721 1124456899999987 33211001111000 01111222468999999999998654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=2.6e-09 Score=114.39 Aligned_cols=186 Identities=15% Similarity=0.058 Sum_probs=96.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHh--cCCCCEEEEcCcccccCCc-hhHHHHHHHhhhhhhc
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS 365 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~l~~ 365 (619)
...+||++++|+|.+... +.. -.......++++++. ..+||+||++||+++.... ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 345999999999987421 100 001112345555543 2689999999999854322 2344556666666654
Q ss_pred -CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHH
Q 007069 366 -TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFI 444 (619)
Q Consensus 366 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL 444 (619)
.+|+++++||||.......... .+ .+...+..-.+ ..++..+-+++.++.++...... ..+..+||
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~~~------~~---~l~~~v~~l~~---~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l 160 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEESP------LA---LLKDYVKILDG---KDVINVNGEEIFICGTYYHKKSK-REEMLDKL 160 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSCCG------GG---GGTTTCEECSE---EEEEEETTEEEEEEEECCCCSTT-HHHHHHHH
T ss_pred cCCcEEEEcCCCCCCccccccCH------HH---HHHHHeEEcCC---CcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHH
Confidence 5899999999997532110000 00 00000111000 11221122458888888654321 12223333
Q ss_pred ---HHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 445 ---EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 445 ---~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
...+. ...+.|++.|.|+ ..... +...... .. +. ++|++++||+|..++
T Consensus 161 ~~l~~~~~-----~~~~~Ill~H~~~-~~~~~-----~~~~~~~--~~----l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 161 KNFESEAK-----NYKKKILMLHQGI-NPYIP-----LDYELEH--FD----LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHHHHHH-----TCSSEEEEECCCC-TTTSS-----SSCSSCG--GG----SC--CCSEEEECSCCSCEE
T ss_pred HHhhhhcc-----cCCCEEEEECcCc-cccCC-----CCcccCH--HH----hh--hCCeEEccCCCCCcc
Confidence 33222 2335899999987 32110 1110111 11 11 399999999998743
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=2.3e-09 Score=107.51 Aligned_cols=212 Identities=15% Similarity=0.184 Sum_probs=110.9
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.+|++++||+|.. ...+++++++..++|.|+++||++...... .+..+.+..+. +++.+
T Consensus 3 ~mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~g~~~---~~~~~~l~~~~---~~~~v 61 (246)
T 3rqz_A 3 AMRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGYGPRP---RECVELVRVLA---PNISV 61 (246)
T ss_dssp CCCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSSSSCH---HHHHHHHHHHC---SSEEC
T ss_pred CcEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCCCCCH---HHHHHHHHhcC---CCEEE
Confidence 3789999999943 234566666656899999999999543322 23344444332 25899
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 452 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 452 (619)
.||||...... +... .+. +.......|. ......++.+||++......
T Consensus 62 ~GNhD~~~~~~---~~~~------------~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~ 109 (246)
T 3rqz_A 62 IGNHDWACIGR---LSLD------------EFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMI 109 (246)
T ss_dssp CCHHHHHHTCC---CCCC--------------C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEE
T ss_pred eCchHHHHhcc---CCcc------------ccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEE
Confidence 99999752110 0000 000 0000000000 01134688999986433322
Q ss_pred CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceec--cC--CCcc
Q 007069 453 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICT--NK--EKNY 528 (619)
Q Consensus 453 r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~--~~--~~~~ 528 (619)
.. .|++.|.++ .+... ..... ...+..+|.++++|++|+||+|.......-.+..+. .. ....
T Consensus 110 --~~--~i~~~Hg~p-~~~~~-----~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~ 176 (246)
T 3rqz_A 110 --DG--DWTVVHGSP-RHPIW-----EYIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEV 176 (246)
T ss_dssp --ET--TEEEESSCS-SSTTT-----CCCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCE
T ss_pred --EC--CEEEEECCc-CCccc-----cccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccce
Confidence 11 466778776 43311 11111 457788999999999999999974322100000000 00 0000
Q ss_pred ccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEE
Q 007069 529 YKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 584 (619)
Q Consensus 529 y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 584 (619)
+. -..+...+..|+-|.+.+. +..-+|+.++. +...++++.+
T Consensus 177 ~~-l~~g~~ivNpGSVG~Prdg------------~p~A~Y~i~d~-~~~~v~~~rv 218 (246)
T 3rqz_A 177 LD-VSSGRYIINPGAVGQPRDG------------DPRASYAIFEP-DAQRVTFHRV 218 (246)
T ss_dssp EE-CSSSCEEEEECCSSCCCSS------------CCSEEEEEEEG-GGTEEEEEEE
T ss_pred ee-cCCCeEEEECCccCCCCCc------------CCcceEEEEEC-CCCEEEEEEe
Confidence 00 0134667788988875311 12236888886 4455555544
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3e-09 Score=108.43 Aligned_cols=216 Identities=15% Similarity=0.152 Sum_probs=113.6
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
..|++++||+|.+ ...+++++++. .++|.|+++||++..+... .+..+.++.+ .|++
T Consensus 11 ~~~i~~iSDiHg~---------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGN---------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCC---------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCEE
Confidence 4899999999953 12233333332 4799999999999543322 3445554443 3789
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 450 (619)
.+.||||...... .. +.++ |..|. ..+.+ .. + .........+|.+||++--..
T Consensus 70 ~v~GNhD~~~~~~---~~-----~~~~------~~~~~----~~~~~-~~-------~-~~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---VR-----KELD------STRPS----QRYLL-RQ-------C-QYVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---HT-----TCSC------TTSHH----HHHHH-HH-------H-HHHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---hc-----cccC------CCcHH----HHHHH-HH-------H-HHHHHHcCHHHHHHHHhCCCc
Confidence 9999999742100 00 0000 00000 00000 00 0 000012346888998864332
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCcccc
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 530 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~ 530 (619)
....-....|++.|..+ .+.....- .... ..+.+..++.+.++|++|+||+|......
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~~~~~~----~~~~-~~~~l~~~~~~~~~d~~i~GHtH~~~~~~---------------- 180 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKNWGREL----IHTG-KQEEFDRLVTHPPCDIAVYGHIHQQLLRY---------------- 180 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBSSSSTT----STTC-CHHHHHHTTTTTTCSEEECCSSCSEEEEE----------------
T ss_pred eEEEECCcEEEEEECCC-CCCCCcee----cCCC-cHHHHHHHhcccCCCEEEECCcCchHhee----------------
Confidence 21111234677778654 32210000 0011 15578888888899999999999643221
Q ss_pred CCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEE
Q 007069 531 GTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 585 (619)
Q Consensus 531 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 585 (619)
..++..+|..|+.|.+...-+ ... .+..-.|+.+++.++..+.++|++
T Consensus 181 -~~~~~~~iNpGSvg~pr~~~~--~~~----~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 181 -GTGGQLIVNPGSIGQPFFLDA--QLR----KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp -CTTSCEEEEECCSSSCCCSST--TGG----GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred -ccCCEEEEECCCccCCCCCCc--ccc----CCCCCEEEEEEecCCCceEEEEEE
Confidence 024678899999887532211 000 012347899998433335677664
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-08 Score=97.22 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=42.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+|++++||+|.. ...++++++.. .++|+|+++||++.. +.++.++.+ ..|++.
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 899999999932 12233333322 689999999999842 234444433 579999
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.70 E-value=2.9e-07 Score=96.30 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=52.3
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccchHHHHHHHHHh--cCCCCEEEEcCcccccCC-chhHHHHHHHhhhhhhc-CC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDF--QYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TV 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~--~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~~-~v 367 (619)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 589999999987421 1000 00112334444432 268999999999996432 22345566666666654 68
Q ss_pred CeEEccCCCccC
Q 007069 368 PYMIASGNHERD 379 (619)
Q Consensus 368 P~~~v~GNHD~~ 379 (619)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-08 Score=97.40 Aligned_cols=149 Identities=18% Similarity=0.215 Sum_probs=83.0
Q ss_pred eEEEEEeecCCCCCCCC--CcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGS--NEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~--~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
+|+++++|+|.+..... ..+..+. .....+.+.+++ ..++|+|+++||+++.. .++....+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFK-GFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCT-THHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHH-HHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCEE
Confidence 57999999997542100 0011111 112223233332 25799999999999643 2223344444443 24899
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 450 (619)
.++||||.... . + ... |-+ +. +..||+ +
T Consensus 76 ~v~GNhD~~~~---~-~-------------~~~-----------~~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 76 LVMGNHDKDKE---S-L-------------KEY-----------FDE----------IY----------DFYKII----E 103 (195)
T ss_dssp EECCTTCCCHH---H-H-------------TTT-----------CSE----------EE----------SSEEEE----E
T ss_pred EEeCCCCCchh---h-h-------------hhh-----------hhc----------hh----------HHHHHH----h
Confidence 99999997411 0 0 000 100 00 111221 1
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
. ..+.|++.|.|+ +..... .+ ..+.+.+..++.+++++++++||+|....
T Consensus 104 ~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 135789999987 543211 11 12367888999999999999999998654
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.8e-07 Score=87.83 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=41.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+|.... ...+ ...++++. .++|+|+++||++.. +..+.++.+ ..|++.++
T Consensus 23 mri~~iSD~Hg~~~-----~~~l----~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----MASL----PDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----TCCC----CHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----HHHH----HHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0011 12233322 579999999999841 333444443 36999999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999963
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.67 E-value=6.5e-07 Score=96.61 Aligned_cols=87 Identities=11% Similarity=0.179 Sum_probs=54.6
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCc-hhHHHHHHHhhhhh---
Q 007069 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPI--- 363 (619)
Q Consensus 290 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~l--- 363 (619)
....+||++++|+|.+........ .......++++++. ..+||+||++||+++.... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~---~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVR---GNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTT---TTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccch---hhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 345699999999998754211100 11223344554432 2689999999999965432 23334455555432
Q ss_pred -------------------------------hcCCCeEEccCCCccC
Q 007069 364 -------------------------------ASTVPYMIASGNHERD 379 (619)
Q Consensus 364 -------------------------------~~~vP~~~v~GNHD~~ 379 (619)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999974
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=4e-06 Score=91.00 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=53.0
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCch-hHHHHHHHhhhh----
Q 007069 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYI-SQWDQFTAQIEP---- 362 (619)
Q Consensus 290 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~---- 362 (619)
+...+||++++|+|.+....... ........++++++.+ .+||+||++||+++..... .....+++.++.
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g 149 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLG 149 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBS
T ss_pred CCCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhccc
Confidence 34569999999999875421111 0112233445544432 6899999999999554321 222233443332
Q ss_pred --------h----------------------hcCCCeEEccCCCccC
Q 007069 363 --------I----------------------ASTVPYMIASGNHERD 379 (619)
Q Consensus 363 --------l----------------------~~~vP~~~v~GNHD~~ 379 (619)
+ ...+|++++.||||..
T Consensus 150 ~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 150 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp SCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999974
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.62 E-value=3e-06 Score=91.08 Aligned_cols=259 Identities=14% Similarity=0.111 Sum_probs=123.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCch-hHHHHHHHhhhh-----
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEP----- 362 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~----- 362 (619)
...+||++++|+|.+........ .......++++++. ..+||+|+++||+++..... .....+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~---~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVR---GNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTT---TTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCccccccc---chhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 45699999999998754211111 11223344554443 26899999999998554321 222233443332
Q ss_pred -------h----------------------hcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCc
Q 007069 363 -------I----------------------ASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAK 413 (619)
Q Consensus 363 -------l----------------------~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~ 413 (619)
+ ...+|++++.||||..... .+....+.-.+.+. -..|.-. ...++
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~--~~~s~~~lL~~~g~--v~l~g~~-~~~~~ 162 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD--GRYSALDILQVTGL--VNYFGRV-PENDN 162 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-------CCCHHHHHHHTTS--CEECCCC-C---C
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc--ccccHHHHhccCCe--EEEeCCc-ccCCc
Confidence 2 1379999999999974211 10000000000000 0011000 00000
Q ss_pred e---EEEEEeCC--EEEEEEeCCCCCCCCHHHH-HHHHHHHhh-ccC---CCCCeEEEEeeccccCCCCccccCCCCCCc
Q 007069 414 F---WYSTDYGM--FRFCVADTEHDWREGTEQY-KFIEHCLAS-VDR---QKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 483 (619)
Q Consensus 414 ~---~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q~-~WL~~~L~~-~~r---~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~ 483 (619)
. -..+.-|. +.+..+.-.. .+.+ +++.+...+ ... ....+.|++.|... .... . ..+.
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~-----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~-~~~~----~-~~yi- 230 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVR-----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNH-SAHT----P-TSYL- 230 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCC-----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCS-SCSS----S-SSSC-
T ss_pred eeEEeEEEEecCceEEEEeccCCc-----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCc-cCCC----C-cccC-
Confidence 0 01234444 4455554321 1221 333322221 111 23457899999876 2211 1 1111
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeee
Q 007069 484 PMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRD 563 (619)
Q Consensus 484 ~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~ 563 (619)
+ + -+...++|+++.||.|..+...-. + ..+++..+-.|+.... .+ +.-..
T Consensus 231 p---~----~l~~~~~DyvalGH~H~~~~~~~~-~-------------~~~g~~i~~PGS~~~~--s~-------~e~E~ 280 (417)
T 4fbw_A 231 P---E----SFIQDFYDFVLWGHEHECLIDGSY-N-------------PTQKFTVVQPGSTIAT--SL-------SPGET 280 (417)
T ss_dssp C---G----GGSCTTCSEEEEESCCSCEEEEEE-E-------------TTTTEEEEECCCSSCS--SC-------CHHHH
T ss_pred c---h----hHhhcCCCEEEecCccccceeccc-c-------------CCCCEEEEECCCCCcC--CC-------ccccC
Confidence 1 1 133568999999999997654200 0 1134444555554321 11 10001
Q ss_pred CcccEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeC
Q 007069 564 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRD 600 (619)
Q Consensus 564 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~ 600 (619)
...||..|++ ++..+.++++.-..-. +..++.+...
T Consensus 281 ~~kg~~lvei-~~~~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 281 APKHCGILNI-TGKDFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp SCCEEEEEEE-ETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred CCCEEEEEEE-ECCEEEEEEEECCCcccEEEEEEEeecc
Confidence 3568999998 5678899988643323 4555555443
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.6e-05 Score=87.15 Aligned_cols=187 Identities=14% Similarity=0.067 Sum_probs=89.9
Q ss_pred CceEEEEEeecCCCCCCCCCcccc--cc--cchHHHHHHHHHhc--CCCC-EEEEcCcccccCCchh--HHHHHHHhhhh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYND--FQ--YASLNTTRQLIQDL--KNID-IVFHIGDICYANGYIS--QWDQFTAQIEP 362 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~--~~--~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~~--~wd~f~~~i~~ 362 (619)
..++|++++|+|..-... .|.. .. .+....+..++++. .++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~~--~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV--ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCE--EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc--cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 359999999999642110 0000 00 01122333333321 3577 8999999995432111 11222233332
Q ss_pred hhcCCCeEEccCCCccCCCCCC--CCCCCCCCCCccccccce-eeeccCC----CCCceEEEEEeCC--EEEEEEeCCCC
Q 007069 363 IASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAET-MFYVPAE----NRAKFWYSTDYGM--FRFCVADTEHD 433 (619)
Q Consensus 363 l~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~~-~f~~P~~----~~~~~~Ysfd~G~--v~fi~Ldt~~~ 433 (619)
+ . +-+.++||||+++.... .++. +.+.++.. ....... ...+.|..++.++ +.|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~~l~~~l~------~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~ 176 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPGPLADFLK------GARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDT 176 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHHHHHHHHT------TCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTH
T ss_pred c--C-CCccccccccccCCHHHHHHHHh------hCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccch
Confidence 2 2 23678999999742100 0000 01111110 0000000 0123456678887 55666665421
Q ss_pred -----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeE
Q 007069 434 -----------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDI 501 (619)
Q Consensus 434 -----------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdl 501 (619)
+....++.+...+.|++ .+...+|++.|.|. . .+ ..+.++ .+||+
T Consensus 177 ~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~-----------------~d--~~la~~~~gvDl 233 (552)
T 2z1a_A 177 REISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-G-----------------ED--LKLARRLVGVQV 233 (552)
T ss_dssp HHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-H-----------------HH--HHHHTTCSSCCE
T ss_pred hhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-c-----------------hH--HHHHHhCCCccE
Confidence 00112333333344543 34556999999985 1 00 122333 58999
Q ss_pred EEecCccccee
Q 007069 502 AIYGHVHNYER 512 (619)
Q Consensus 502 vl~GH~H~YeR 512 (619)
+|+||.|....
T Consensus 234 IlgGHtH~~~~ 244 (552)
T 2z1a_A 234 IVGGHSHTLLG 244 (552)
T ss_dssp EEECSSCCCBS
T ss_pred EEeCCcCcccc
Confidence 99999998654
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.06 E-value=1e-05 Score=89.69 Aligned_cols=200 Identities=15% Similarity=0.110 Sum_probs=91.0
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchH-HHHHHHHHhc--CCC-CEEEEcCcccccCCch--hHHHHHHHhhhhhhcC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDL--KNI-DIVFHIGDICYANGYI--SQWDQFTAQIEPIAST 366 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~-~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~ 366 (619)
.++|++++|+|....... ...+....+ ..++++.++. .++ ++++.+||++...... .......+.+..+ .
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--g 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--G 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--T
T ss_pred EEEEEEecccccCccCCC--CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--C
Confidence 489999999997532100 001111111 2233333221 145 7999999998432110 1112233334333 2
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCccccccc--eeeeccCC-CCCceEEEEEeCC--EEEEEEeCCCC--CC-C--
Q 007069 367 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE--TMFYVPAE-NRAKFWYSTDYGM--FRFCVADTEHD--WR-E-- 436 (619)
Q Consensus 367 vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~--~~f~~P~~-~~~~~~Ysfd~G~--v~fi~Ldt~~~--~~-~-- 436 (619)
.. +.++||||+++... .+... -.+.+.++. ..+.-... ...+.|..++.++ +-|+.+.+... +. +
T Consensus 84 ~d-~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 84 YD-AMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp CC-EEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred CC-EEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 33 67899999964210 00000 000001110 00000000 0113355677887 55666765431 11 1
Q ss_pred --------CHH-HHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCc
Q 007069 437 --------GTE-QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHV 507 (619)
Q Consensus 437 --------~~~-Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~ 507 (619)
..+ -.+|+++ |++. .+...+|++.|.|. +.... .+.. ... ...+...+...+||++|+||.
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~----~~~~-~~~-~~~la~~~~~~~iDlilgGHt 228 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE----HGSN-APG-DVEMARALPAGSLAMIVGGHS 228 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC----CTTS-CCC-HHHHHHHSCTTSSSEEECCSS
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc----cccc-Cch-HHHHHHhCCCCceeEEECCCC
Confidence 012 2234333 4321 24567999999997 32211 1100 011 223444444456999999999
Q ss_pred ccce
Q 007069 508 HNYE 511 (619)
Q Consensus 508 H~Ye 511 (619)
|...
T Consensus 229 H~~~ 232 (516)
T 1hp1_A 229 QDPV 232 (516)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9854
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00025 Score=78.67 Aligned_cols=205 Identities=11% Similarity=0.094 Sum_probs=90.6
Q ss_pred CceEEEEEeecCCCCCCCCCcccc---cccchHHHHHHHHHhc--CCCC-EEEEcCcccccCCchhHH--------HHHH
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYND---FQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW--------DQFT 357 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~---~~~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~~~w--------d~f~ 357 (619)
..++|++++|+|..-... .|.. -..+-...+..++++. .+++ +++.+||++.... ...+ ....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~--~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPT--DFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSSC--CSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccCc--ccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 459999999999643210 0100 0011123344444331 3455 7788999995321 1111 1222
Q ss_pred HhhhhhhcCCCeEEccCCCccCCCCCC--CCCCCCCCCCccccccc--eeeeccCCCCCceEEEEEeCC--EEEEEEeCC
Q 007069 358 AQIEPIASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAENRAKFWYSTDYGM--FRFCVADTE 431 (619)
Q Consensus 358 ~~i~~l~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~~~~~~~Ysfd~G~--v~fi~Ldt~ 431 (619)
+.+..+ ... +.++||||+++.... .++. ++..|+. .....-.....+.|.-++.++ +-||.+.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 222222 333 567999998742100 0000 0000100 000000000012355678887 456666654
Q ss_pred CC--CCC-----C---HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007069 432 HD--WRE-----G---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 501 (619)
Q Consensus 432 ~~--~~~-----~---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 501 (619)
.. +.. + ....+.+++.+++.. .+...+|++.|.+...........+....+.. ...|..-+ ..+||+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDl 242 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDI 242 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSE
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcE
Confidence 21 111 0 122344444444432 34567999999875221100000000001111 12333222 257999
Q ss_pred EEecCcccce
Q 007069 502 AIYGHVHNYE 511 (619)
Q Consensus 502 vl~GH~H~Ye 511 (619)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999855
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00021 Score=71.44 Aligned_cols=170 Identities=15% Similarity=0.201 Sum_probs=84.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCccccc-CCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYA-NGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~-~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.|++++||.=.. ++ ...+..++++. +. |+++..|..+.. .+.. ....+.+.. ..+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~--~G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLRE--AGVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHH--HTCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHh--CCCCEE
Confidence 489999997211 11 22333333321 34 898888776633 2332 222222222 244554
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEe--CCCCCCCCHHHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVAD--TEHDWREGTEQYKFIEHCL 448 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ld--t~~~~~~~~~Q~~WL~~~L 448 (619)
+.||||++..+...|.+... + -.--++|.+..++.|.-++.++.++-+++ +......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~-------~-vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP-------V-VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS-------E-ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC-------c-eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 77999998531111110000 0 00011222223456777888886655544 4322211122233456666
Q ss_pred hhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 449 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 449 ~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
++.. .+.+|+.+|.-. .+ + .+.+. .+..-+||+++.||+|...
T Consensus 133 ~~lk---~d~IIv~~H~g~--ts-----------e---k~~la-~~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 133 EEEK---ADYVLVEVHAEA--TS-----------E---KMALA-HYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp HHCC---CSEEEEEEECSC--HH-----------H---HHHHH-HHHBTTBSEEEEESSCSCB
T ss_pred HHhC---CCEEEEEeCCCc--HH-----------H---HHHHH-HhCCCCeEEEEcCCCCcCC
Confidence 6652 678999999532 11 1 11222 2234579999999999843
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00011 Score=82.73 Aligned_cols=193 Identities=13% Similarity=0.080 Sum_probs=88.6
Q ss_pred CCceEEEEEeecCCCCCCCCCccc--c----cccchHHHHHHHHHhc--CCCC-EEEEcCcccccCCch--hHHHHHHHh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYN--D----FQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYI--SQWDQFTAQ 359 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~--~----~~~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~--~~wd~f~~~ 359 (619)
.-.++|++++|+|..-......|. . -..+-+..+..++++. .+++ +++..||++...... .......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345999999999954221000000 0 0011123333333321 2455 899999999543111 011222233
Q ss_pred hhhhhcCCCeEEccCCCccCCCCC--CCCCCCCCCCCccccccc--eeeeccCC---CCCceEEEEEeCCE--EEEEEeC
Q 007069 360 IEPIASTVPYMIASGNHERDWPGT--GSFYGNKDSGGECGVLAE--TMFYVPAE---NRAKFWYSTDYGMF--RFCVADT 430 (619)
Q Consensus 360 i~~l~~~vP~~~v~GNHD~~~~~~--~~~y~~~dsgge~g~~~~--~~f~~P~~---~~~~~~Ysfd~G~v--~fi~Ldt 430 (619)
+..+ ... +.++||||+++... ..++. +++.|+. ....-... ..-+.|.-++.+++ -||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3322 233 46799999874210 00010 0111110 00100000 01134556788874 5666644
Q ss_pred -CC-----CCCCC---HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007069 431 -EH-----DWREG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 501 (619)
Q Consensus 431 -~~-----~~~~~---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 501 (619)
.. ....+ ....+-+++.+++........+|++.|.+. . . ...+...+ .+||+
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~--~-------------~--d~~la~~~--~giDl 221 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS--E-------------K--NIEIAQKV--NDIDV 221 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH--H-------------H--HHHHHHHC--SSCCE
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc--h-------------h--hHHHHHhC--CCCCE
Confidence 10 00010 122344555544443244667999999875 0 0 11222111 47999
Q ss_pred EEecCcccce
Q 007069 502 AIYGHVHNYE 511 (619)
Q Consensus 502 vl~GH~H~Ye 511 (619)
+|.||.|...
T Consensus 222 IlgGHtH~~~ 231 (579)
T 3ztv_A 222 IVTGDSHYLY 231 (579)
T ss_dssp EEECSSCCEE
T ss_pred EEeCCCCccc
Confidence 9999999865
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=4.1e-05 Score=85.51 Aligned_cols=190 Identities=11% Similarity=0.059 Sum_probs=90.1
Q ss_pred CceEEEEEeecCCCCCCCCCccccc-------ccchHHHHHHHHHhc--CCC-CEEEEcCcccccCCchh--HHHHHHHh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDF-------QYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYIS--QWDQFTAQ 359 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~-------~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~~--~wd~f~~~ 359 (619)
..++|++++|+|..-... .+... ..+-...+..++++. .++ ++++.+||++....... ......+.
T Consensus 24 ~~l~Il~~nD~Hg~~~~~--~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ 101 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQT--SEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHF 101 (546)
T ss_dssp EEEEEEEECCCTTCCSCB--CTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred eEEEEEEecccccCCccc--ccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHH
Confidence 459999999999643210 00000 001123333333321 234 69999999995432111 11222333
Q ss_pred hhhhhcCCCeEEccCCCccCCCCC--C-CCCCCCCCCCccccccc--eeee----ccC-CCCCceEEEEEeCCEE--EEE
Q 007069 360 IEPIASTVPYMIASGNHERDWPGT--G-SFYGNKDSGGECGVLAE--TMFY----VPA-ENRAKFWYSTDYGMFR--FCV 427 (619)
Q Consensus 360 i~~l~~~vP~~~v~GNHD~~~~~~--~-~~y~~~dsgge~g~~~~--~~f~----~P~-~~~~~~~Ysfd~G~v~--fi~ 427 (619)
+..+ ... +.++||||+++... . .++. +++.++. .... -|. ....+.|.-++.++++ ||.
T Consensus 102 ln~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG 172 (546)
T 4h2g_A 102 MNAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 172 (546)
T ss_dssp HHHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEE
T ss_pred HHhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEE
Confidence 3332 334 56799999874210 0 1111 1111111 0000 000 0012345667888855 556
Q ss_pred EeCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCC
Q 007069 428 ADTEHD--W-REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKV 499 (619)
Q Consensus 428 Ldt~~~--~-~~~-----~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~V 499 (619)
+.+... + .++ .+..+.+++.+++....+...+|++.|.+. . . ...+...+ .+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~-~--------------~--d~~la~~~--~gi 233 (546)
T 4h2g_A 173 YTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGF-E--------------M--DKLIAQKV--RGV 233 (546)
T ss_dssp EECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCH-H--------------H--HHHHHHHS--TTC
T ss_pred ecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCc-c--------------c--hHHHHHhC--CCC
Confidence 655321 0 011 122344444444432234667999999885 0 0 11222211 479
Q ss_pred eEEEecCcccce
Q 007069 500 DIAIYGHVHNYE 511 (619)
Q Consensus 500 dlvl~GH~H~Ye 511 (619)
|++|+||.|...
T Consensus 234 DlIlgGHtH~~~ 245 (546)
T 4h2g_A 234 DVVVGGHSNTFL 245 (546)
T ss_dssp CEEECCSSCCCC
T ss_pred cEEEeCCcCccc
Confidence 999999999854
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0002 Score=72.84 Aligned_cols=172 Identities=14% Similarity=0.068 Sum_probs=87.8
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccch---HHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHhhhhhhcCCC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYAS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVP 368 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s---~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP 368 (619)
.+|++++||.+.. ++. ...++++.++ .++|+++..||.+..+ +.. ....+.+..+ .+-
T Consensus 4 ~m~ilf~GDv~G~------------~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D 65 (281)
T 1t71_A 4 SIKFIFLGDVYGK------------AGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN 65 (281)
T ss_dssp CCEEEEECEEBHH------------HHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC
T ss_pred eEEEEEECCcCCh------------HHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC
Confidence 3799999999722 111 1233444333 2589999999998543 332 1222222221 334
Q ss_pred eEEccCCCccCCC-CCCCCCCCCCCCCccccccceeeeccCCC----CCceEEEEEeCCEE--EEEEeCCCCCCC--CHH
Q 007069 369 YMIASGNHERDWP-GTGSFYGNKDSGGECGVLAETMFYVPAEN----RAKFWYSTDYGMFR--FCVADTEHDWRE--GTE 439 (619)
Q Consensus 369 ~~~v~GNHD~~~~-~~~~~y~~~dsgge~g~~~~~~f~~P~~~----~~~~~Ysfd~G~v~--fi~Ldt~~~~~~--~~~ 439 (619)
. .++||||++.. +.-.|.+. . . +. ..-++|... .++.|.-++.++++ +|.+-+...+.+ -..
T Consensus 66 a-~TlGNHefD~g~~~~~~l~~---~-~---~v-~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~ 136 (281)
T 1t71_A 66 Y-ITMGNHTWFQKLDLAVVINK---K-D---LV-RPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTN 136 (281)
T ss_dssp E-EECCTTTTCCGGGHHHHTTC---T-T---EE-CBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCC
T ss_pred E-EEEccCcccCCccHHHHhhh---c-C---EE-eeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccC
Confidence 3 47799999864 11011110 0 0 00 001112111 34456678887754 555555431221 122
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 440 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 440 Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
-.+-+++.++ +.+...+|+.+|.-. .+ + .+.+.. .-..+||+++.||+|...
T Consensus 137 pf~~a~~~v~---~~~~diIIv~~H~g~--t~-----------E---k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 137 PFKVLKELIL---KRDCDLHIVDFHAET--TS-----------E---KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHHHT---TCCCSEEEEEEECSC--HH-----------H---HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHHHh---hcCCCEEEEEeCCCc--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 2444555555 356788999999421 00 1 112222 223469999999999854
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00049 Score=68.99 Aligned_cols=173 Identities=12% Similarity=0.060 Sum_probs=85.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccC-CchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.|++++||.= +. ++ ...++.++++. +. |+++..|+.+..+ +... ...+.+.. ..+-.+
T Consensus 1 m~ilf~GDv~-g~-----------~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~--~G~Da~ 61 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------PG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALE--AGAGCL 61 (255)
T ss_dssp CEEEEECCBB-HH-----------HH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHH--HTCSEE
T ss_pred CEEEEEeccC-Ch-----------HH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHh--CCCCEE
Confidence 4899999972 11 11 23333344332 23 9999998888433 3321 22222222 134444
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeecc-CCCCCceEEEEEeCCEE--EEEEeCCCCCCCCHHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHDWREGTEQYKFIEHC 447 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~~~~~~~Q~~WL~~~ 447 (619)
++||||++...-..+.+.... .+. .--++| .+..++.|.-++.++.+ +|.|-+......-..-.+-+++.
T Consensus 62 -TlGNHefD~~~l~~~l~~~~~-----~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 62 -TLGNHAWHHKDIYPMLSEDTY-----PIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp -ECCTTTTSSTTHHHHHHTTCS-----CEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred -EeccccccCchHHHHHhhCCC-----cEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 669999985311111110000 000 001122 22234556668887754 45554543221222223446666
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
+++. +...+|+.+|.-. ++ + .+.+.. ...-+||+++.||+|...-
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 6654 4677999999421 10 1 112222 2244699999999998543
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0001 Score=81.56 Aligned_cols=203 Identities=14% Similarity=0.104 Sum_probs=89.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccc---cccchHHHHHHHHHhc--CCCCEEEE-cCcccccCCchh---HHHHHHHhhhhh
Q 007069 293 LQRVVIFGDMGKDEADGSNEYND---FQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYIS---QWDQFTAQIEPI 363 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~---~~~~s~~~~~~i~~~~--~~pDfVl~-~GDi~y~~g~~~---~wd~f~~~i~~l 363 (619)
.++|++++|+|..-......|.. -..+....+..++++. .+++.+++ +||++... ... ......+.+..+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ln~l 84 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIMNTM 84 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHHTTS
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHHHhc
Confidence 48999999999543211000100 0011133344443321 35776655 99999532 111 112222233221
Q ss_pred hcCCCeEEccCCCccCCCCCC--CCCCCCCCCCccccccc--eeeeccCCC--CCceEEEEEeCCE--EEEEEeCCC---
Q 007069 364 ASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAEN--RAKFWYSTDYGMF--RFCVADTEH--- 432 (619)
Q Consensus 364 ~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~~--~~~~~Ysfd~G~v--~fi~Ldt~~--- 432 (619)
. +-+.++||||+++.... .++. +++.|+- +.+.-..+. ..+.|.-++.+++ -||.+.+..
T Consensus 85 --g-~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~ 155 (509)
T 3ive_A 85 --P-FDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFN 155 (509)
T ss_dssp --C-CSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHH
T ss_pred --C-CcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccc
Confidence 2 33567899998752100 0010 0011110 000000000 0233556788874 456664321
Q ss_pred --CCC---C---CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007069 433 --DWR---E---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 503 (619)
Q Consensus 433 --~~~---~---~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 503 (619)
.+. . -....+.+++.+++.. .+...+|++.|.++.+..... ......... . .-..+.++ .+||++|
T Consensus 156 ~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~--~~~~~~~~~-~-~d~~la~~~~giDlIl 230 (509)
T 3ive_A 156 DTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM--GGTDVRRAL-D-KDIQTASQVKGLDILI 230 (509)
T ss_dssp HHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC-----CCCCCC-H-HHHHHHHHCSSCCEEE
T ss_pred cccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccc--ccccccccc-c-hHHHHHhcCCCCcEEE
Confidence 010 0 0223445555555543 236778999998752222111 000000001 1 11233333 4799999
Q ss_pred ecCcccc
Q 007069 504 YGHVHNY 510 (619)
Q Consensus 504 ~GH~H~Y 510 (619)
.||.|..
T Consensus 231 gGHtH~~ 237 (509)
T 3ive_A 231 TGHAHVG 237 (509)
T ss_dssp EESSCCC
T ss_pred eCCcCcc
Confidence 9999963
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.66 E-value=6.6e-05 Score=73.03 Aligned_cols=82 Identities=10% Similarity=0.216 Sum_probs=45.0
Q ss_pred cccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCc---
Q 007069 275 IWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--- 349 (619)
Q Consensus 275 ~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~--- 349 (619)
.|+....|.+.. -+|++++||+|... ..++++++.. .++|+|+++||+++....
T Consensus 13 ~~~~~~~~~~~~------mmki~~iSD~H~~~---------------~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~ 71 (208)
T 1su1_A 13 LGTENLYFQSNA------MMKLMFASDIHGSL---------------PATERVLELFAQSGAQWLVILGDVLNHGPRNAL 71 (208)
T ss_dssp ------------------CCEEEEECCCTTBH---------------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCC
T ss_pred cCcccceecccc------cEEEEEEEcCCCCH---------------HHHHHHHHHHHhcCCCEEEECCCccccCccccc
Confidence 456666664322 27999999999541 2233333322 479999999999954321
Q ss_pred hhH--HHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 350 ISQ--WDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 350 ~~~--wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
..+ -.+..+.++.+. .|++.++||||..
T Consensus 72 ~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 101 (208)
T 1su1_A 72 PEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 101 (208)
T ss_dssp CTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred ccccCHHHHHHHHHhcC--CceEEEECCCchH
Confidence 111 134455554432 5899999999974
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00051 Score=76.80 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=25.6
Q ss_pred CC-EEEEcCcccccCCchhHH---HHHHHhhhhhhcCCCeEEccCCCccCC
Q 007069 334 ID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTVPYMIASGNHERDW 380 (619)
Q Consensus 334 pD-fVl~~GDi~y~~g~~~~w---d~f~~~i~~l~~~vP~~~v~GNHD~~~ 380 (619)
|| +++.+||++.... ...+ ....+.+..+ ..+++ + ||||+++
T Consensus 123 pd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~ 168 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTL 168 (562)
T ss_dssp CCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGG
T ss_pred CCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhccc
Confidence 88 9999999995432 2212 2223333333 46665 6 9999864
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0017 Score=55.65 Aligned_cols=99 Identities=15% Similarity=0.128 Sum_probs=61.5
Q ss_pred CCCcceeeecCC-CCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 174 NAPVYPRLAQGK-TWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 174 ~~P~~~~La~~~-~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
.+|..+++.... +.++++|+|......+. ..-.|+|.......... -..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDD-WIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTT-SEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccc-eEEEEE-----------------CCCceEE
Confidence 567767766543 47899999987643110 12355565432211000 000111 1223467
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 290 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 290 (619)
+|++|+|++.|.+||......|...||+...|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999998876566677899999999876544
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0081 Score=66.95 Aligned_cols=85 Identities=18% Similarity=0.116 Sum_probs=42.8
Q ss_pred CCceEEEEEeecCCCCCCCCC--ccc-ccccchHHHHHHHHHh---cCCCC-EEEEcCcccccCCchh----HHHHHHHh
Q 007069 291 NSLQRVVIFGDMGKDEADGSN--EYN-DFQYASLNTTRQLIQD---LKNID-IVFHIGDICYANGYIS----QWDQFTAQ 359 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~--~~~-~~~~~s~~~~~~i~~~---~~~pD-fVl~~GDi~y~~g~~~----~wd~f~~~ 359 (619)
...++|++++|+|..-..... .|. .+ +....+...+++ ..+++ +++.+||++....... ......+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~--Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ 90 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANW--GDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPI 90 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCH--HHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHH
T ss_pred ceEEEEEEEcccccCccCccccccccccc--chHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHH
Confidence 346999999999975321110 110 11 112223333332 25677 5799999994322110 11111222
Q ss_pred hhhhhcCCCeEEccCCCccCC
Q 007069 360 IEPIASTVPYMIASGNHERDW 380 (619)
Q Consensus 360 i~~l~~~vP~~~v~GNHD~~~ 380 (619)
+..+ ... +.++||||++.
T Consensus 91 ln~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 91 FIKQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp HTTS--CCS-EECCCGGGSSS
T ss_pred HHhc--CCC-EEeecchhccc
Confidence 2221 233 56889999975
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.013 Score=54.33 Aligned_cols=120 Identities=20% Similarity=0.164 Sum_probs=64.7
Q ss_pred EEEEeeccc--ceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007069 137 KLMLINQRS--DFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 211 (619)
Q Consensus 137 ~~~l~n~r~--~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 211 (619)
++.|-+.+. .|.|.+... +.+.|..+... ..|.+|..+++.. .+.++++|+|....+ ....-.|+|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~-----t~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~ 131 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGS-----TVVGSPKGISFSD-ITENSATVSWTPPRS-RVDSYRVSYVP 131 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCSCEEEES-CCSSCEEEEECCCSS-CCSEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEE-----CCCCCCCccEEEE-eCCCEEEEEEECCCC-cccEEEEEEEe
Confidence 344455554 577776662 23334333222 2366787666542 346899999987532 12234566765
Q ss_pred cCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCC
Q 007069 212 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPY 287 (619)
Q Consensus 212 ~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~ 287 (619)
.++... ...... +-....+|+||+||+.|.++|...... +.|+ ...|+|.|.
T Consensus 132 ~~~~~~----~~~~~~-----------------~~~~~~~i~~L~p~t~Y~~~V~A~~~~---g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 132 ITGGTP----NVVTVD-----------------GSKTRTKLVKLVPGVDYNVNIISVKGF---EESEPISGILKTALD 185 (186)
T ss_dssp TTCCCC----EEEEEE-----------------TTCCEEEECSCCSSCEEEEEEEEEETT---EECCCEEEEEEC---
T ss_pred CCCCCc----eEEEcC-----------------CCcCEEEEcCCCCCCEEEEEEEEEcCC---CcCcCEEEEEEecCC
Confidence 433111 011111 122457789999999999999874322 2233 456777663
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0028 Score=53.23 Aligned_cols=93 Identities=16% Similarity=0.109 Sum_probs=57.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCC-CccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
-|.+|..+++... ..++++|+|....+.....-.|+|...... .+.... .......
T Consensus 7 ~P~~P~~~~~~~~-~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~ 63 (106)
T 2dju_A 7 GPKPPIDLVVTET-TATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRY 63 (106)
T ss_dssp SCCCCEEEEEEEE-ETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEE
T ss_pred CCcCCCCcEEEec-cCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEE
Confidence 3456666665432 368999999976321112345666654322 111100 0112245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
+|++|+|++.|.|||......|...||+...++|.+.
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 64 SIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCC
Confidence 7899999999999999775556667888888998764
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.001 Score=56.71 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=59.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.. .+.+++.|.|......+. ..-.|+|...+..... ..... +-...
T Consensus 10 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~ 67 (111)
T 1x5l_A 10 APSQVVVIRQER-AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTR 67 (111)
T ss_dssp CCCCCCCEECSC-BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSE
T ss_pred CCCCCceEEEEE-cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCcee----EEEec-----------------CCCCE
Confidence 345565555432 347899999987643111 1235666554321110 01111 11245
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 290 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 290 (619)
.+|++|+|++.|.+||......|...||+...|+|++.++.
T Consensus 68 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 68 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 77899999999999998765556667899999999886543
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0087 Score=57.03 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCCCCcceeeecCC---CCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCCcccccc
Q 007069 172 NPNAPVYPRLAQGK---TWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWR 242 (619)
Q Consensus 172 ~~~~P~~~~La~~~---~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~ 242 (619)
-|.+|..+.+.... ..+++.|+|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 46788777776543 46899999988643210 12345555443322211 000
Q ss_pred CCCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcCC
Q 007069 243 DPGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKASP 286 (619)
Q Consensus 243 ~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~p 286 (619)
+-.....|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987654454 5788899999954
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.018 Score=54.53 Aligned_cols=135 Identities=9% Similarity=0.071 Sum_probs=74.2
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeC---CCC---CcEE-EEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCC
Q 007069 131 TGKGSLKLMLINQRS--DFSVALFSG---GLL---KPKL-VAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN 201 (619)
Q Consensus 131 ~g~~~~~~~l~n~r~--~~~f~~f~~---~~~---~~~~-~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~ 201 (619)
.+.....+.+-+.+. .|.|++... |.. .+.. +.......-..|.+|..+++. ..+.+++.|+|.......
T Consensus 65 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~-~~~~~sv~l~W~~p~~~~ 143 (214)
T 2ibg_A 65 ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE-EYSETAVVLHWSLASDAD 143 (214)
T ss_dssp SSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCB-CCSSSCEEEEEECCTTCC
T ss_pred ccCcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEE-EccCCeEEEEEeCCCccC
Confidence 445666777777775 688887764 221 1111 111111111123345544432 224689999999863100
Q ss_pred ---CCccEEEEeecCC-CCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007069 202 ---EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWS 277 (619)
Q Consensus 202 ---~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S 277 (619)
...-.|+|...+. ..+. ..+.. +......+|+||+|++.|.|||......|...+|
T Consensus 144 ~~~i~~Y~v~~~~~~~~~~~~----~~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 203 (214)
T 2ibg_A 144 EHLITGYYAYYRPSSSAGEYF----KATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASEFS 203 (214)
T ss_dssp GGGCCEEEEEEEETTCCSCCE----EEEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCC
T ss_pred CCCcceEEEEEEECCCCcceE----Eeecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCc
Confidence 1123566665433 1111 01111 1112345789999999999999987666767788
Q ss_pred ceEEEEcCC
Q 007069 278 SEYQFKASP 286 (619)
Q Consensus 278 ~~~~F~T~p 286 (619)
+...++|..
T Consensus 204 ~~~~~~T~~ 212 (214)
T 2ibg_A 204 ALKQGRTQR 212 (214)
T ss_dssp CCEEEECCC
T ss_pred ceEeeEecC
Confidence 889999864
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0056 Score=52.59 Aligned_cols=42 Identities=14% Similarity=0.070 Sum_probs=35.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 289 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 289 (619)
...+|++|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 457899999999999999877656777789999999987544
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0031 Score=55.54 Aligned_cols=94 Identities=17% Similarity=0.140 Sum_probs=58.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCC
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPG 245 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 245 (619)
-|.+|..+++.- .+.+++.|+|......+. ..-.|+|...+..... . .... .
T Consensus 18 pp~~P~~l~~~~-~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~--~--~~~~-----------------~ 75 (123)
T 2edd_A 18 PMLPPVGVQAVA-LTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK--Y--KSED-----------------T 75 (123)
T ss_dssp SSCCCEEEEEEE-EETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC--C--CCEE-----------------E
T ss_pred CCCCCcceEEEE-cCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc--E--EEEe-----------------C
Confidence 345666666532 246899999986532110 0345777764321100 0 0000 0
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
....++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 76 ~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 76 TSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 124678999999999999998765456678999999999875
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0017 Score=55.46 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=58.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++......++++|+|........ ..-.|+|...+...+.. .+. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPRE-----VYQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEE-----EEE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEE-----EEe-----------------CCcE
Confidence 4567777776433346899999965422111 12345555432222211 010 1123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
..++++|+|+++|.+||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4678999999999999988765666778998999987653
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0024 Score=54.67 Aligned_cols=94 Identities=14% Similarity=0.144 Sum_probs=57.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
-|.+|..+++. ..+.+++.|+|.......-..-.|+|...+..... ... .+-....+
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~----~~~------------------~~~~~~~~ 73 (115)
T 1x5z_A 17 VPGQPLNFKAE-PESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RIT------------------IEPGTSYR 73 (115)
T ss_dssp CCCCCEEEEEE-CSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCE------------------ECSSSEEE
T ss_pred CCCCCccCEee-eCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCce----EEe------------------cCCCcEEE
Confidence 34456556553 23478999999876431111234444433221110 000 00114567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
|+||+|+|.|.+||......|...||+...|+|.+.+
T Consensus 74 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 74 LQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp EECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred ECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 8999999999999987755666678999999998653
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00062 Score=66.41 Aligned_cols=64 Identities=17% Similarity=0.283 Sum_probs=42.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.|++++||+|.. ...+.++++.. .++|.++++||+++. |... .+.++.+. ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~-g~~~--~~~~~~l~----~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVDR-GAEN--VECLELIT----FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSSS-SSCH--HHHHGGGG----STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccCC-CCCh--HHHHHHHh----cCCEE
Confidence 689999999943 23345555543 368999999999954 4322 12333332 35899
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999964
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.012 Score=55.81 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=56.7
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 175 APVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 175 ~P~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
+|..+++.... +.++++|+|......+ -..-.|+|...+...... -...+. ++-....+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 67777766554 3689999998754211 112345555433221100 000111 12234677
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+||+|++.|.++|......|.+.||+...|++..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999876555666788888888754
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.017 Score=63.86 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=42.3
Q ss_pred ceEEEEEeCCEE--EEEEeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCC
Q 007069 413 KFWYSTDYGMFR--FCVADTEHD-----------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG 479 (619)
Q Consensus 413 ~~~Ysfd~G~v~--fi~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~ 479 (619)
..|.-++.++++ ||.+-+..- +...-+..+...+.|++ .+..-+|++.|..+ .
T Consensus 134 ~py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~--------- 199 (530)
T 4h1s_A 134 LPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E--------- 199 (530)
T ss_dssp BSEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H---------
T ss_pred cceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h---------
Confidence 346667888854 566655421 11112222333334443 35567999999653 0
Q ss_pred CCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 480 SFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 480 ~~~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
.+ ..+.++ -+||++|.||.|.+-
T Consensus 200 -------~d--~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 -------MD--KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp -------HH--HHHHHHSTTCCEEECCSSCCCB
T ss_pred -------HH--HHHHhcCCCCCeeccCCcccee
Confidence 00 113333 479999999999753
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0056 Score=52.76 Aligned_cols=95 Identities=15% Similarity=0.139 Sum_probs=58.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCC-CCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGY-GIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~-~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++... +.++++|.|.... ..+ -..-.|+|...+..... .... ..+-..
T Consensus 17 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~ 75 (120)
T 1x5f_A 17 LPSAPRDVVASLV-STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER------VENT--------------SHPGEM 75 (120)
T ss_dssp CCCCCEEEEEEEE-CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE------EEEC--------------SSTTCS
T ss_pred CCCCCCCcEEEec-CCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce------EEEe--------------ccCCcc
Confidence 4556666665432 4689999998764 211 11245666654322111 0000 011234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.++|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 76 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 578999999999999998765556667888999999764
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0014 Score=55.68 Aligned_cols=95 Identities=16% Similarity=0.187 Sum_probs=56.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCc----cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAE----AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|.+|..+.+.... .+ ++|+|...... .+. -.|+|...+...+... ..... ..+-.
T Consensus 6 ~P~~P~~~~~~~~~-~~-v~l~W~~P~~~-~G~pi~~Y~v~~~~~~~~~~~~~----~~~~~-------------~~~~~ 65 (105)
T 2haz_A 6 TPSSPSIDQVEPYS-ST-AQVQFDEPEAT-GGVPILKYKAEWRAVGEEVWHSK----WYDAK-------------EASME 65 (105)
T ss_dssp CCCCCEEEEEEECS-SC-EEEEEECCSCC-TTSCCCEEEEEEEETTCCCCEEE----EEEHH-------------HHHHH
T ss_pred CCcCCCCCEEEEcC-Cc-EEEEEcCCccc-CCccccEEEEEEEECCCCCCccc----eEEcc-------------ccCCc
Confidence 35557666554433 34 99999976431 122 3466665443211100 00000 00122
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..++|+||+|+|.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 456799999999999999876555666788999999987
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0027 Score=53.85 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=57.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++.. .+.+++.|+|...... .+ .-.|+|...+..... .... .+-..
T Consensus 7 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~ 63 (108)
T 2djs_A 7 GPSTVPIMHQVS-ATMRSITLSWPQPEQP-NGIILDYEIRYYEKEHNEFN----SSMA-----------------RSQTN 63 (108)
T ss_dssp CCCCCSCCEEEE-ECSSEEEEECCCCSCC-SSCEEEEEEEEEETTSCSTT----CEEE-----------------EESSS
T ss_pred CCCCCcceEEEe-cCCCEEEEEECCCCCC-CCeEEEEEEEEEECCCCCcc----eeEE-----------------ecCcc
Confidence 355666665532 2468999999876431 11 123445443321110 0010 01124
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
.++|+||+|++.|.+||......|...||+...|+|.+..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 5678999999999999987766666778999999998753
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0056 Score=63.98 Aligned_cols=49 Identities=27% Similarity=0.156 Sum_probs=27.7
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|-.+ ..+.. ....+.. ...|..-+ .+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~----~~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ----SSGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC----CTTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 45677999999875 22111 0001111 12232222 579999999999853
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0025 Score=54.27 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=56.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCC-CccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
|.+|..+++.- .+.++++|+|........ ..-.|+|...+.. .+. ..+. +...
T Consensus 8 P~~P~~p~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~~-----------------~~~~ 64 (109)
T 1x5x_A 8 PSMPASPVLTK-AGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK-----PKYD-----------------GEDL 64 (109)
T ss_dssp CCCCCCCEEEE-ECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE-----EEEE-----------------ESCS
T ss_pred CcCCCCCEEEE-ccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceE-----EeEe-----------------CCcc
Confidence 45666666433 346899999987643211 1235566543321 111 0111 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..++++|+|++.|.|||......|...+|+...++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 467899999999999999875556667888888998764
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0065 Score=51.51 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=58.3
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++... .+.++++|+|......+. ..-.|+|...+...+.. ... . ..
T Consensus 7 ~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~------~~~---------------~--~~ 63 (108)
T 2dm4_A 7 GPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWAS------QRA---------------A--SN 63 (108)
T ss_dssp CTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEE------EEE---------------S--SS
T ss_pred CCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEE------ecC---------------C--cc
Confidence 3557777766554 257899999998642110 01345555443321110 000 0 12
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..+|++|+|++.|.+||......|...||+...|+|.+
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 67899999999999999876656667789999999854
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0016 Score=56.06 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=33.6
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 289 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 289 (619)
..+|+||+|++.|.|||......|...||+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35689999999999999877656666789989999987653
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0014 Score=54.98 Aligned_cols=89 Identities=18% Similarity=0.118 Sum_probs=54.2
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCC--CCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGY--GIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~--~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.+|..+++. ..+.+++.|+|.... ..+ -..-.|+|...+.... .... +-...
T Consensus 10 ~~P~~l~~~-~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~------~~~~-----------------~~~~~ 65 (103)
T 2edy_A 10 GFPQNLHVT-GLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQE------LQNI-----------------TTDTR 65 (103)
T ss_dssp CCCEEEECS-SBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCE------EEEE-----------------ESSSC
T ss_pred CCCeeeEEE-ecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCcc------EEEc-----------------CCcce
Confidence 455555542 224689999998872 111 1123455654433211 0100 01123
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
.+|+||+|++.|.+||......|...||+...|+|.|
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 66 FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 5789999999999999877556666788888888876
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0037 Score=54.20 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=57.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 246 (619)
|.+|..+++.. .+.+++.|+|........ ..-.|+|....... ....+. .+-
T Consensus 9 p~~P~~l~~~~-~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEEEE-EETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEEEE-ecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 45676666543 247899999986532110 02356666521100 001110 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 34678999999999999998775556678999999999765
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.017 Score=54.92 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=57.9
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++... .+.+++.|+|....... ...-.|+|...+...+..... .+ ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~------~~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP------ED------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG------GG------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEecc------cc------------ccCccc
Confidence 4667877777643 35789999998764211 012355665543222211000 00 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p 286 (619)
..+|++|+|+|+|.+||......|.+ .||+...|+|.+
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 67799999999999999976544543 366778888865
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.007 Score=51.53 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=58.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.. .+.+++.|+|......+ -..-.|+|...++..... ...... .. ..
T Consensus 7 ~P~~p~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~~~---------------~~--~~ 65 (109)
T 2e7h_A 7 GPPAVSDIRVTR-SSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS---VRFLKT---------------SE--NR 65 (109)
T ss_dssp SSCCCCCCEEEE-EETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTT---SEEEEE---------------SS--SE
T ss_pred CCCCCCccEEEe-cCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCce---eEEEcc---------------CC--CE
Confidence 345566666532 23689999998764211 012356665543111100 001100 11 26
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
++|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 66 AELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 789999999999999998765666778999999998754
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0072 Score=51.67 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=35.3
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 290 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 290 (619)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 88999999999999999876666678999999999887554
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.002 Score=55.91 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCC-CCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|.+|..+.+.-....+++.|+|....... -..-.|+|..... ..+.. .+ .+..
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEM-----IY-----------------SGAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEE-----EE-----------------CSSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEE-----EE-----------------eccc
Confidence 345666666652234689999998754310 0123455554332 11111 00 0112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...++++|+|++.|.|||......|...||+...++|.+.
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 3457899999999999999765556566788778888654
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0067 Score=51.93 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=57.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++... +.++++|+|......+ -..-.|+|...+..... ... .....
T Consensus 17 ~P~~P~~l~~~~~-~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~----~~~-------------------~~~~~ 72 (116)
T 1x5g_A 17 LPGPAPNLRAYAA-SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ----DVD-------------------VSSHS 72 (116)
T ss_dssp CCCCCSSCEEEEE-ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC----CEE-------------------ECSSE
T ss_pred CCcCCCccEEEec-CCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE----EEe-------------------cCCce
Confidence 3456666665332 3689999998763211 11235666554332210 000 01235
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.+|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 73 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 73 YTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 77899999999999998765556667888889999764
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0021 Score=65.45 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=43.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+++++||+|.. ...+.++++.. .++|.++++||+++. |..+ .+.++.+..+ ..+++.
T Consensus 2 ~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdr-G~~s--~~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 2 ATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLVAR-GPGS--LDVLRYVKSL--GDSVRL 61 (280)
T ss_dssp CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCSSS-SSCH--HHHHHHHHHT--GGGEEE
T ss_pred eEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCC-CCcc--HHHHHHHHhC--CCceEE
Confidence 68999999853 23456666654 357999999999954 4322 1233333333 127999
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999964
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0059 Score=51.83 Aligned_cols=90 Identities=17% Similarity=0.215 Sum_probs=56.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCc----cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAE----AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
|.+|..+++... +.+++.|+|..... .+. -.|+|....... ...+. +...
T Consensus 8 P~~P~~~~~~~~-s~~sv~l~W~~p~~--~g~~i~~Y~v~~~~~~~~~------~~~~~-----------------~~~~ 61 (106)
T 1x4x_A 8 PDQCKPPQVTCR-SATCAQVNWEVPLS--NGTDVTEYRLEWGGVEGSM------QICYC-----------------GPGL 61 (106)
T ss_dssp CCCCCCCCCEEE-ETTEEEEECCCCSC--SSSCCCEEEEEEESSTTSC------CEEEE-----------------ESCS
T ss_pred cCCCCCCEEEEc-CCCEEEEEEcCCCC--CCCcceEEEEEEEcCCCce------EEEEe-----------------CCcc
Confidence 455665555422 36899999987643 122 345554332110 01111 1113
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
..+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 5678999999999999997765566678999999998653
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0089 Score=51.60 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=57.1
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.. .+.++++|+|.......-..-.|+|...+..... ...... .+....++|+|
T Consensus 21 ~P~~l~~~~-~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGVKV-LSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEA--ANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEEEE-EETTEEEEECCCCSCTTCCEEEEEEEESSSCGGG--CEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEEEE-ccCCEEEEEecCCCCCccceEEEEEEECCCcccC--cEEEEc-----------------CCCEeEEEECC
Confidence 455555432 2368999999876420111235666543321100 000111 11224678999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007069 255 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 289 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 289 (619)
|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999876555666789889999986543
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0082 Score=51.53 Aligned_cols=93 Identities=18% Similarity=0.152 Sum_probs=58.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|.+|..+++... +.+++.|+|..... ...+ .|+|...+..... .... .....
T Consensus 17 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~ 73 (119)
T 2ed7_A 17 LPSAPRDVVPVLV-SSRFVRLSWRPPAE--AKGNIQTFTVFFSREGDNRER------ALNT--------------TQPGS 73 (119)
T ss_dssp SCCCCSCCEEEEE-CSSCEEEECCCCSC--CSSCEEEEEEEEEESSCCCCE------EEEC--------------CCTTC
T ss_pred CCcCCcceEEEec-CCCEEEEEEeCCCC--CCCcEEEEEEEEEeCCCCcce------eeEe--------------ecCCc
Confidence 4567777766542 46899999987643 1222 3445443222111 0000 01123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...+|++|+|++.|.+||......|...||+...++|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 4578899999999999998766566677899999999764
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0099 Score=52.01 Aligned_cols=96 Identities=8% Similarity=0.020 Sum_probs=58.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++... +.++++|+|......+. ..-.|+|...+..... ..... ..+....
T Consensus 27 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~-----------------~~~~~~~ 86 (130)
T 1wfo_A 27 VPGPPMGILFPEV-RTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEV-----------------LAPSARQ 86 (130)
T ss_dssp CCCCCCCCEEEEE-CSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEE-----------------ECTTCCE
T ss_pred CCCCCCceEEEec-CCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEE-----------------eCCCceE
Confidence 3556666665433 46899999987642110 1235566544321100 00000 0123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.+|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 87 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 87 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 78899999999999998876566667888888998764
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0051 Score=53.75 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=48.1
Q ss_pred CCCCcEEEEEEeCCCCC-C-CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 007069 185 KTWNEMTVTWTSGYGIN-E-AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYT 262 (619)
Q Consensus 185 ~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~ 262 (619)
.+.++++|+|..+.+.. + ..-.|+|...+...+... ... ++....++|+||+|++.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 45799999998654311 1 123677776543222110 000 1112356799999999999
Q ss_pred EEEeeecCCCCccccceEEEEcCCC
Q 007069 263 YKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 263 Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
+||.....-|...-| ...|+|.+.
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~ 102 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPK 102 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCC
Confidence 999876433433322 367888654
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.094 Score=54.61 Aligned_cols=47 Identities=23% Similarity=0.310 Sum_probs=27.0
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|-.+ ..+.. ....+.. .. ++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~--~~d~~----~~~~en~-~~----~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGL--SADPY----QAMAENS-VY----YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCC--CCSCC----CTTCSCC-HH----HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HH----HHhhCCCCCEEEeCCCcccc
Confidence 45677999999874 22110 0001111 11 1223 589999999999854
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.017 Score=48.51 Aligned_cols=92 Identities=8% Similarity=-0.038 Sum_probs=56.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++... +.++++|+|......+ -..-.|+|...+..... .... . ...
T Consensus 7 ~P~~P~~l~~~~~-~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~ 62 (106)
T 2ed8_A 7 GPGPVENLQAVST-SPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLS 62 (106)
T ss_dssp CCCCCEEEEEECS-STTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSC
T ss_pred CCcCCceeEEEec-CCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccE
Confidence 3556766665432 4689999998764211 11235566544322111 0000 0 134
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
++|++|+|++.|.+||......|...+|+...|+|...
T Consensus 63 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 63 YKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 67899999999999998775556667888889998754
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0028 Score=63.68 Aligned_cols=64 Identities=23% Similarity=0.329 Sum_probs=41.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CC-CCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~-pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.|++++||+|.. ...++++++.. .. .|.++++||+++. |... .+.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~-g~~~--~~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNK-GPDS--FGVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSSS-SSCH--HHHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCCC-CCCH--HHHHHHHHH----CCCE
Confidence 389999999932 23355555543 23 4999999999954 3322 123333332 4799
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999964
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.02 Score=49.12 Aligned_cols=96 Identities=19% Similarity=0.057 Sum_probs=58.3
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCC--C--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGI--N--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
+|..+++.. .+.+++.|+|...... + -..-.|+|...+....... .. .....++-....
T Consensus 18 ~P~~~~~~~-~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTLQP-VTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SI---------------VEMKATGDSEVY 80 (122)
T ss_dssp CCEEEEEEE-CSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BC---------------CBCCCCSSEEEE
T ss_pred CCcceEEEe-ccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce-EE---------------EEEecCCceeEE
Confidence 465566532 3468999999987431 1 1123566655432211000 00 000113446778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765556566888888988754
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.059 Score=55.65 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=31.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
...+|++|+|++.|.+||......|...+|.. .|+|++.|
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 45678999999999999997655566666655 89998765
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0071 Score=53.36 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=56.1
Q ss_pred CCCCCc-ceeeecCCCCCcEEEEEEeCCCCCCCcc-EEEEeecCCCCc--cccCcceEEecCCcCCCCCccccccC--CC
Q 007069 172 NPNAPV-YPRLAQGKTWNEMTVTWTSGYGINEAEA-FVQWGRKGGDRT--HSPAGTLTFDRGSMCGAPARTVGWRD--PG 245 (619)
Q Consensus 172 ~~~~P~-~~~La~~~~~~~m~V~W~t~~~~~~~~~-~V~yg~~~~~~~--~~~~~~~t~~~~~mc~~pa~~~g~~~--~g 245 (619)
-|.+|. .+++.- .+.++++|.|..+... .... .++|....+... ..... ...|.. ..
T Consensus 15 ~P~~P~~~~~~~~-~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~~~~~~---------------~~~w~~~~~~ 77 (127)
T 2dmk_A 15 APNPPSIREELCT-ASHDTITVHWISDDEF-SISSYELQYTIFTGQANFISLYNS---------------VDSWMIVPNI 77 (127)
T ss_dssp SCCCCEEEEEEEE-EETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHHHHHHT---------------GGGSEEEEEE
T ss_pred CCcCCCCCCEEEe-eeCCEEEEEECCCCCC-CccceEEEEEEecccccccccccC---------------CCCcEEeecc
Confidence 466776 555533 2468999999987542 1223 677764211000 00000 001100 00
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.-...+++||+|+++|.|||......|. .+|+...++|.+.
T Consensus 78 ~~~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 78 KQNHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQ 118 (127)
T ss_dssp CSSEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSS
T ss_pred cCCeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCC
Confidence 0124578999999999999987755555 5677888988764
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.013 Score=50.71 Aligned_cols=96 Identities=15% Similarity=0.092 Sum_probs=54.4
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecC-CCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 171 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 171 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
.-|.+|..+++.. .+.++++|.|.-..+... ..-.|+|.... ...+..... .. ++..
T Consensus 16 ~~P~~P~~~~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIST-ASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEEE-CCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEEE-ccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 4567777776643 246899999985432110 12356666543 222211100 00 1223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p 286 (619)
...+|++|+|+++|.|||......|...+|..- .+++.+
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~ 115 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 115 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCC
Confidence 456789999999999999876544444555543 355544
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.022 Score=48.76 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=28.7
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 289 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 289 (619)
..++|+||+|||.|.++|.... ++...-+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 4678999999999999999763 2222223456678877543
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.017 Score=49.62 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee----cCC-CCccccCcceEEecCCcCCCCCccccccCCCe
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR----KGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~----~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 246 (619)
-|.+|..+++.- .+.++++|.|....+ ...+...|-. ... ..+. ..+. ...
T Consensus 17 ~P~~P~~~~~~~-~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~-----~~~~---------------~~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIAN-RTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFC-----QCYM---------------GSQ- 72 (118)
T ss_dssp CCCCCCCCEEEE-EETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCE-----EEEE---------------ESC-
T ss_pred CCcCCCCcEEec-cCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeE-----Eeec---------------cCC-
Confidence 455666666543 236899999988653 2334444443 221 1110 0010 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...++++|+|++.|.|||......|...||+...|+|.+.
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 3457899999999999998765566667888888998764
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.043 Score=52.13 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=73.6
Q ss_pred cceEEEEEEeecc--cceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCC-----CCCcEEEEEEeCCC
Q 007069 132 GKGSLKLMLINQR--SDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGK-----TWNEMTVTWTSGYG 199 (619)
Q Consensus 132 g~~~~~~~l~n~r--~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~P~~~~La~~~-----~~~~m~V~W~t~~~ 199 (619)
|..+..|.+.+.+ ..|.|.+...... -...|.++.| ..|.+|..+.+.... ..+++.|+|.....
T Consensus 64 ~~~~~~~~~~~L~~~~~Y~~~V~A~N~~---G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~ 140 (215)
T 1cd9_B 64 RQNNCSIPRKNLLLYQYMAIWVQAENML---GSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP 140 (215)
T ss_dssp TCCEEEEEGGGCCTTSCEEEEEEEEETT---EEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECCcccccceEEEEEEEEECCC---CCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC
Confidence 4455566654443 4677777652111 0112222222 357778777665431 57899999987642
Q ss_pred CCC--CccEEEEe-ecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007069 200 INE--AEAFVQWG-RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-- 274 (619)
Q Consensus 200 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-- 274 (619)
... -.-.|+|. ..+...+... ... .+......|.+|+|+|+|..||......|.+
T Consensus 141 ~~~~~l~Y~v~y~~~~~~~~w~~~----~~~----------------~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~w 200 (215)
T 1cd9_B 141 SEYMEQECELRYQPQLKGANWTLV----FHL----------------PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFW 200 (215)
T ss_dssp GTTSCEEEEEEEEESSTTCCCEEE----EEE----------------ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCC
T ss_pred CCeEEEEEEEEEccCCCCCCcEEE----ecc----------------cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCC
Confidence 100 13456666 3333222110 000 1123567899999999999999876543333
Q ss_pred -cccceEEEEcCC
Q 007069 275 -IWSSEYQFKASP 286 (619)
Q Consensus 275 -~~S~~~~F~T~p 286 (619)
.||+...|+|+.
T Consensus 201 S~wS~~~~~~T~e 213 (215)
T 1cd9_B 201 SPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCCCEEECCCC
T ss_pred cCCCCccceecCC
Confidence 477888898864
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.027 Score=49.07 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=32.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..++|++|+|+|+|.+||......|...||+...|+|.|.
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 3567899999999999998765555567888888987764
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0065 Score=53.55 Aligned_cols=40 Identities=13% Similarity=0.252 Sum_probs=33.7
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
.++++||+|+|+|.+||......|...||+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 4678999999999999998766677778888999998653
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0053 Score=64.20 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=43.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CCCEEEEcCcccccCCchhHHHHHHHhhhhh
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 363 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 363 (619)
.+++++||+|.. ...+.++++... ++|.++++||+++.+.... +.+..+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~---evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN---EVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH---HHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH---HHHHHHHHH
Confidence 689999999843 234556655422 4799999999995433222 222232222
Q ss_pred -----hcCCCeEEccCCCccC
Q 007069 364 -----ASTVPYMIASGNHERD 379 (619)
Q Consensus 364 -----~~~vP~~~v~GNHD~~ 379 (619)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2245689999999963
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.013 Score=50.79 Aligned_cols=89 Identities=15% Similarity=0.063 Sum_probs=55.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCC--C--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGI--N--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
+|..+++... +.++++|+|...... + -..-.|+|...+..... ... ++.....
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM-----ETL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE-----EEE-----------------CSSCSEE
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce-----EEe-----------------cCCcCEE
Confidence 4555555332 368999999876431 0 11235566554322110 000 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
+|++|+|++.|.+||......|...||+...|+|..
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 799999999999999876556666789999999864
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.12 Score=48.88 Aligned_cols=107 Identities=17% Similarity=0.283 Sum_probs=58.2
Q ss_pred EEEEeeccc--ceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007069 137 KLMLINQRS--DFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 211 (619)
Q Consensus 137 ~~~l~n~r~--~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 211 (619)
.+.|-+.+. .|.|.+... +.+.|..+... ..+.+|..+++.. .+.++++|+|....+.....-.|+|..
T Consensus 78 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~-----~~~p~P~~l~~~~-~~~~sv~l~W~~p~~~~i~~Y~v~~~~ 151 (203)
T 2gee_A 78 YYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQ-----TAVPPPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSP 151 (203)
T ss_dssp EEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCEEEEEEE-EETTEEEEEEECCSSCCCSEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccEeeeec-----CCCcCCCceEEEE-cCCCEEEEEEcCCCCCCccEEEEEEEE
Confidence 344445444 566666552 33344433221 2223566666432 236899999998743112234567765
Q ss_pred cCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeec
Q 007069 212 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 212 ~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
..+... ...... ++-....+|+||+|++.|.++|....
T Consensus 152 ~~~~~~---~~~~~~-----------------~~~~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 152 VKNEED---VAELSI-----------------SPSDNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp TTCGGG---CEEEEE-----------------CTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCc---cEEEEc-----------------CCCcCEEEECCCCCCCEEEEEEEEec
Confidence 332110 001111 12235678899999999999998753
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0097 Score=56.41 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=57.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+.+..... +++|+|....... ...-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS--TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECSS--CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeeccC--eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 456777776654433 6999999864211 122346666543322211 111000 001224
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..+|++|+|++.|.|||......|...+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 577899999999999998765555556788888998764
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.023 Score=47.73 Aligned_cols=90 Identities=11% Similarity=0.144 Sum_probs=51.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
|.+|. +.+... +.+++.|+|......+ -..-.|+|...+...+.. ... ..-....
T Consensus 8 P~~p~-~~v~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~-----------------~~~~~~~ 64 (107)
T 2dn7_A 8 PGRPT-MMISTT-AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDF-----------------GKDDQHF 64 (107)
T ss_dssp CCCCE-EEEEEC-STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEE-----------------ETTCCEE
T ss_pred CCCCc-EeEEec-CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEe-----------------CCCccEE
Confidence 34444 444433 5789999999864211 112356666543322111 111 1122456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
+|++|+|++.|.+||......|...+|. ..|+|..
T Consensus 65 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 65 TVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 7899999999999998765444445565 4577754
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.031 Score=45.49 Aligned_cols=84 Identities=20% Similarity=0.276 Sum_probs=46.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++... ..+++.|+|....+ ......|....+. ..... . .+ -..++
T Consensus 4 P~~P~~l~~~~~-~~~sv~L~W~~~~~---~~~i~~Y~v~~~~-------~~~~~----------~-----~~--~~~~~ 55 (88)
T 1k85_A 4 PTAPTNLASTAQ-TTSSITLSWTASTD---NVGVTGYDVYNGT-------ALATT----------V-----TG--TTATI 55 (88)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSC---CSSEEEEEEEESS-------SEEEE----------E-----SS--SEEEE
T ss_pred cCCCCccEEEec-cCCEEEEEECCCCC---CCCccEEEEEECC-------EEEee----------c-----CC--CEEEe
Confidence 556666655432 36899999987642 1235555542111 00000 0 11 13468
Q ss_pred cCCCCCCEEEEEEeeecCCCC-ccccceEEEEc
Q 007069 253 KELWPNAMYTYKVGHRLFNST-YIWSSEYQFKA 284 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T 284 (619)
++|+||++|+|+|......|. ...|....|+|
T Consensus 56 ~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 999999999999987644443 22344555543
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.11 E-value=0.036 Score=52.48 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=55.1
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCC------CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYG------INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
.+|..+++.. .+.++++|+|..... .....-.|+|...+..... .... .+-.
T Consensus 6 ~~P~~l~~~~-~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~ 63 (211)
T 3p4l_A 6 MPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNA-----------------NATT 63 (211)
T ss_dssp CCCEEEEEEE-CSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEE-----------------EESS
T ss_pred CCCCCEEEEe-cCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEe-----------------CCCc
Confidence 4566666533 236899999997421 0111245666654332110 0010 0123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...+|++|+|+|.|.++|......|...||....|+|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 4677899999999999998765455556788889998653
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.017 Score=49.00 Aligned_cols=86 Identities=13% Similarity=0.004 Sum_probs=47.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|.+|..+++. ..+.++++|+|...... ...+ .|+|...+...+..... .+...
T Consensus 7 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~-g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~ 64 (110)
T 2yuw_A 7 GTSPPTLLTVD-SVTDTTVTMRWRPPDHI-GAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDK 64 (110)
T ss_dssp CSCCCEEEEEE-EECSSCEEEEEECCSSC-CSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCS
T ss_pred CCCCCCccEEE-eccCCeEEEEECCCCCC-CCCCccEEEEEEEECCCccceEecc--------------------ccCcc
Confidence 34566655554 22468999999876421 1223 34554433222211100 01122
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccce
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE 279 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~ 279 (619)
...++++|+|+++|.|||......|...+|+.
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~ 96 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVNAAGASEPKYY 96 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCcCCCCcCC
Confidence 35678999999999999987644444444443
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.035 Score=46.95 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=52.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++.- .+.+++.|+|.-... .-..-.|+|........ ...... ++-...++|
T Consensus 3 p~~P~~l~v~~-~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~~~~~l 60 (104)
T 2rb8_A 3 LDAPSQIEVKD-VTDTTALITWMPPSQ-PVDGFELTYGIKDVPGD---RTTIDL-----------------TEDENQYSI 60 (104)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEETTCTTC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEEE-ecCCeEEEEEcCCCC-ccceEEEEEEECcCCCc---eEEEEc-----------------CCCcCEEEe
Confidence 55677776643 346899999987532 11224567765421110 000111 112345689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
+||+|||+|.++|......|... .....|+|.+..
T Consensus 61 ~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 61 GNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred CCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 99999999999998754333221 234568887653
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.024 Score=48.96 Aligned_cols=92 Identities=13% Similarity=-0.013 Sum_probs=53.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--C-CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--N-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|..+.+.- .+.++++|.|...... . -..-.|+|...+...+...... ....-.
T Consensus 11 p~~P~~P~v~~-v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~~ 69 (112)
T 1bpv_A 11 IDPPGKPVPLN-ITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILENE 69 (112)
T ss_dssp CCCCCCCEEEE-EETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSSE
T ss_pred CCCCCCCEEEE-eeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccCE
Confidence 45666666642 2468999999843211 1 1234677776543333211100 011124
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 285 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 285 (619)
.+++||+||+.|.|||......|. ..+|+.-...|.
T Consensus 70 ~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 568999999999999998755554 455655555543
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.017 Score=49.49 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=51.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccE----EEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAF----VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~----V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|.+|..+++.. .+.++++|+|..... . ... |+|...+...+. .... ..+-.
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~--~-g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~ 72 (118)
T 2yrz_A 17 VPDTPTRLVFSA-LGPTSLRVSWQEPRC--E-RPLQGYSVEYQLLNGGELH------RLNI--------------PNPAQ 72 (118)
T ss_dssp CCCCCCCCEECC-CBTTEEEEECCCCCC--S-SCEEEEEEEEEBSSSCCEE------EEEE--------------SCTTC
T ss_pred CCCCCCceEEEe-CCCCEEEEEeCCCCC--C-CCccEEEEEEEECCCCceE------EEEc--------------CCCCc
Confidence 455666665432 246899999987643 1 234 444332221110 0000 01123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p 286 (619)
...+|++|+|++.|.+||......|...||+ ...++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 4577899999999999998765556556676 44444443
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.15 Score=50.69 Aligned_cols=102 Identities=17% Similarity=0.092 Sum_probs=56.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.+.+|..+++.. .+.++++|.|....+ ....-.|+|...++.... .... .+.....+
T Consensus 112 ~~~~P~~l~~~~-~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~ 168 (290)
T 3r8q_A 112 NVSPPRRARVTD-ATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYT 168 (290)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEE
T ss_pred CCCCCceeEEEE-cCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEE
Confidence 355677666652 346899999998642 123346666654332110 0111 11223467
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCCCCCCceEEEEEee
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPYPGQNSLQRVVIFGD 301 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~~g~~~~~rf~v~GD 301 (619)
|+||+|++.|.++|......| .|. ...+.|.|.+ ...+++...++
T Consensus 169 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 169 ITGLQPGTDYKIYLYTLNDNA---RSSPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEEET
T ss_pred ECCCCCCCEEEEEEEEEeCCc---ccCCEEEEecCCCCC--CCccEEEeeCC
Confidence 899999999999998653222 233 3445565532 22355544433
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.12 Score=49.87 Aligned_cols=100 Identities=14% Similarity=0.058 Sum_probs=56.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.. .+.++++|+|......+ -..-.|+|....+..... ....... ........
T Consensus 98 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~ 161 (234)
T 3f7q_A 98 VPSEPGRLAFNV-VSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI-GPMKKVL--------------VDNPKNRM 161 (234)
T ss_dssp CCCCCCCCEEEE-CSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS-SCCEECC--------------CSCTTCCE
T ss_pred CCCCCCccEEEE-ecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc-CcceEEE--------------ecCCcceE
Confidence 355676666543 24689999998653211 012356666543322110 0000000 00112346
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASPY 287 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p~ 287 (619)
.+|+||+|++.|.++|......|...+|+ ...|+|.+.
T Consensus 162 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 162 LLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 78999999999999998765455555665 467888764
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.017 Score=50.53 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=34.1
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.....+|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 345678999999999999998765556667898899999763
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.035 Score=47.51 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=33.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..++|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998766566667898899999764
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0096 Score=61.31 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=41.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc--CCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~--~vP~ 369 (619)
.+++++||.|.. ...+.++++.. ...+.++++||+++ .|..+ .+.+..+..+.. .-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYVD-RGYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCccC-CCCCh--HHHHHHHHHHHhhCCCcE
Confidence 469999999843 23345555542 34677899999995 44432 122333332221 2358
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.056 Score=49.88 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=45.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
.|.+|..+++.. .+.+++.|+|....... ...-.|+|...+...+.. ... .-..
T Consensus 102 ~p~~p~~~~~~~-~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLMD-VTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT-----CAT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEEE-ECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEE-----EEE-----------------ESSS
T ss_pred CCCCCcccEEEe-ccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEE-----eec-----------------cccc
Confidence 456777776542 23689999998754311 112355565543322111 000 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNS 272 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg 272 (619)
..++++|+|++.|.|+|......|
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n~~G 182 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQNEKG 182 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTE
T ss_pred EEEeCCcCCCCEEEEEEEEEeCCc
Confidence 467899999999999998764333
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.11 Score=51.40 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=30.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
...+|+||+||+.|.++|......| ..+|+...|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998765445 4678899999964
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.058 Score=52.85 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=56.4
Q ss_pred CCCCCcceeeecCCC-C----CcEEEEEEeCCCCC------CCccEEEEeecCCCCccccCcceEEecCCcCCCCCcccc
Q 007069 172 NPNAPVYPRLAQGKT-W----NEMTVTWTSGYGIN------EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVG 240 (619)
Q Consensus 172 ~~~~P~~~~La~~~~-~----~~m~V~W~t~~~~~------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g 240 (619)
.|.+|.-+.+.+... . .++.|.|....... .-.-.|+|..++...+....
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------- 190 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------- 190 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC-------------------
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe-------------------
Confidence 577888776554332 2 45999999874210 11245566554332221100
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEEeeecCCC--CccccceEEEEcC
Q 007069 241 WRDPGYIHTSFLKELWPNAMYTYKVGHRLFNS--TYIWSSEYQFKAS 285 (619)
Q Consensus 241 ~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg--~~~~S~~~~F~T~ 285 (619)
......+.|.+|+||++|..||.....+| -..||+...|+|+
T Consensus 191 ---~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ---PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ---CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ---ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 11124567899999999999999876555 3467778888775
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.05 Score=55.08 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=74.0
Q ss_pred cceEEEEEE--eecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCC-----CCCcEEEEEEeCCC
Q 007069 132 GKGSLKLML--INQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGK-----TWNEMTVTWTSGYG 199 (619)
Q Consensus 132 g~~~~~~~l--~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~P~~~~La~~~-----~~~~m~V~W~t~~~ 199 (619)
|..+.+|.. +..-..|.|++..-... -...|.++.| .-|.+|..+++.... ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~---G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENAL---GTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETT---EEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCC---CCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 445666654 22334788887653111 0112323222 246778766655432 46899999987642
Q ss_pred CCC--CccEEEEe-ecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007069 200 INE--AEAFVQWG-RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-- 274 (619)
Q Consensus 200 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-- 274 (619)
... -.-.|+|. ..+...+... .. ..+..+...|++|+|+|+|..||......|.+
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~----~~----------------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALV----GP----------------LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEE----EE----------------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEc----cc----------------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 111 13456666 3333322211 00 01234678899999999999999976443444
Q ss_pred -cccceEEEEcCC
Q 007069 275 -IWSSEYQFKASP 286 (619)
Q Consensus 275 -~~S~~~~F~T~p 286 (619)
.||+...|+|+.
T Consensus 295 S~wS~~~~~~T~~ 307 (313)
T 2d9q_B 295 SDWSPSLELRTTE 307 (313)
T ss_dssp CCCCCCEEECCCC
T ss_pred CCCCCccceeCCc
Confidence 467778888865
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.051 Score=47.38 Aligned_cols=41 Identities=15% Similarity=-0.196 Sum_probs=33.1
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
....+|+||+|+|.|.+||......|...||....|+|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35678999999999999998765556667888888998754
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.047 Score=46.08 Aligned_cols=92 Identities=14% Similarity=0.065 Sum_probs=51.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++.-- +.++++|+|.-... ...-.|+|.......+.. ..... -++. .++
T Consensus 8 ~~~~P~~l~~~~~-~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~---~~~~~---------------~~~~--~~~ 64 (104)
T 2dkm_A 8 PLPPPRALTLAAV-TPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEE---EREVQ---------------VGRP--EVL 64 (104)
T ss_dssp SCCCCCCCEEEEE-CSSEEEEECCCCSS--CSEEEEEEEESSSCCSSC---CEEEE---------------ESSS--EEE
T ss_pred CCCCCceeEEEec-CCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcc---eEEEe---------------cCCC--EEE
Confidence 3456777776432 35899999976543 233456676543211100 00000 0122 788
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
|+||+|+|+|.++|......+... .....++|.|.
T Consensus 65 l~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~ 99 (104)
T 2dkm_A 65 LDGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTS 99 (104)
T ss_dssp EESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCC
T ss_pred ECCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCC
Confidence 999999999999998763222211 12345666654
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.026 Score=49.15 Aligned_cols=40 Identities=10% Similarity=-0.043 Sum_probs=33.5
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...+|++|+|++.|.+||......|...||+...|+|++.
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 3567899999999999998766566677899999999875
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.015 Score=49.71 Aligned_cols=94 Identities=15% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++.. .+.++++|.|....+.. -..-.|+|...+. ..+... .. .....
T Consensus 15 ~P~~P~~~~~~~-~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~----------------~~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVTD-VTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTV-----AN----------------HVKTT 72 (117)
T ss_dssp SCBCCCCCEEEE-ECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEE-----EE----------------EECSS
T ss_pred CccCCCCCEEEE-ecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEc-----cc----------------ccCcC
Confidence 455677666652 34689999998764211 0113455544321 111100 00 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEE-EEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQ-FKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~-F~T~p~ 287 (619)
..++++|+|++.|.|||......|...||..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 467899999999999998765444445565544 777654
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.35 Score=47.51 Aligned_cols=105 Identities=15% Similarity=0.199 Sum_probs=58.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++.. .+.++++|+|....+ ....-.|+|...++.... ...... +.+-....+
T Consensus 104 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRVGS-RTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEEEe-cCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 456777666533 246899999998642 123346677654332210 111110 011256788
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccce--EEEEcCCCCCCCCceEEEEEee
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKASPYPGQNSLQRVVIFGD 301 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T~p~~g~~~~~rf~v~GD 301 (619)
|++|+|++.|.++|......| .|.. ..+.|.|.+ ...+++...++
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCCC--CCccEEeEecC
Confidence 999999999999998764322 3443 345554432 22355544443
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.23 Score=50.85 Aligned_cols=85 Identities=20% Similarity=0.218 Sum_probs=50.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
-|.+|..+.+... +.+++.|+|..... ....-.|+|...++... ....+. ++-....+
T Consensus 275 ~p~~P~~l~~~~~-~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~ 332 (368)
T 1fnf_A 275 VSDVPRDLEVVAA-TPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTAT 332 (368)
T ss_dssp CCCSCEEEEEEEE-ETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEE
T ss_pred CCCCCCeeEEEec-CCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEc-----------------CCCeeEEE
Confidence 4566766665432 36899999987643 12234566665433211 001111 11234677
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSS 278 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 278 (619)
++||+||+.|.|+|......|...+|.
T Consensus 333 ~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 333 ISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp ECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred ecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 899999999999998765455444553
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.045 Score=46.64 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=53.7
Q ss_pred ccccCCCCCcceeeecCC-CCCcEEEEEEeCCC-----CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccc
Q 007069 168 IAFTNPNAPVYPRLAQGK-TWNEMTVTWTSGYG-----INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGW 241 (619)
Q Consensus 168 ~~~~~~~~P~~~~La~~~-~~~~m~V~W~t~~~-----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~ 241 (619)
+.-.-|.+|..+++..-. ..+++.|+|..... ...-.-.|+|...+...+.. .. .
T Consensus 3 ~~ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~-~-------------- 63 (109)
T 1uc6_A 3 LGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VE-L-------------- 63 (109)
T ss_dssp TTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EE-E--------------
T ss_pred cCEEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Ee-c--------------
Confidence 333457788888877643 46899999988652 01124567777654332211 00 0
Q ss_pred cCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007069 242 RDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 278 (619)
Q Consensus 242 ~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 278 (619)
.-...+.|.+|+||++|..||..... |.+.||+
T Consensus 64 ---~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~ 96 (109)
T 1uc6_A 64 ---SNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSD 96 (109)
T ss_dssp ---SSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCC
T ss_pred ---ccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCc
Confidence 00135578999999999999997642 4444444
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.019 Score=59.72 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=42.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---CCEEEEcCcccccCCchhHHHHHHHhhhhh--hcCC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTV 367 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~---pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~v 367 (619)
..|++++||+|.. ...+.++++.... -+.++++||+++ .|..+ -+.+..+..+ ...-
T Consensus 63 ~~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~ 124 (335)
T 3icf_A 63 DVKISVCGDTHGQ---------------FYDVLNLFRKFGKVGPKHTYLFNGDFVD-RGSWS--CEVALLFYCLKILHPN 124 (335)
T ss_dssp TCEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTEEEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTT
T ss_pred CceEEEEecCCCC---------------HHHHHHHHHHcCCCCCCcEEEEeCCccC-CCcCh--HHHHHHHHHHhhhCCC
Confidence 3689999999854 2345566665332 246999999995 44332 1222222222 1234
Q ss_pred CeEEccCCCccC
Q 007069 368 PYMIASGNHERD 379 (619)
Q Consensus 368 P~~~v~GNHD~~ 379 (619)
.++.+.||||..
T Consensus 125 ~v~llrGNHE~~ 136 (335)
T 3icf_A 125 NFFLNRGNHESD 136 (335)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEecCchhhh
Confidence 588999999953
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.013 Score=60.77 Aligned_cols=67 Identities=18% Similarity=0.175 Sum_probs=42.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP~~ 370 (619)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+ .+.+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGKQS--LETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SSSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC---------------HHHHHHHHHHhCCCCcceEEeCCCcCC-CCCCh--HHHHHHHHHhhhhcCCceE
Confidence 58999999854 23455666543 34577999999995 44432 1223333222 2233589
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=95.58 E-value=0.05 Score=54.73 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=59.3
Q ss_pred cCCCCCcceeeecC-CCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 171 TNPNAPVYPRLAQG-KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 171 ~~~~~P~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
.-|.+|..+++... .+.+++.|+|....... ...-.|+|...+...+...... + .++-.
T Consensus 198 ~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~ 259 (303)
T 1i1r_A 198 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTR 259 (303)
T ss_dssp EECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCC
T ss_pred EecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCce
Confidence 35677887777543 35789999998764311 0123566665543222111000 0 01223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p 286 (619)
...+|++|+|+|.|.+||......|.+ .||+...|+|+.
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 467799999999999999876444443 456778898864
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.066 Score=45.91 Aligned_cols=91 Identities=16% Similarity=0.085 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++.. .+.+++.|+|..... .-..-.|+|...++... .... ++-...++
T Consensus 7 ~p~~P~~l~~~~-~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRALN-LTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEECCC-CSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEEEe-ccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 456777665532 237899999987532 11223566654322110 0111 11234678
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
|+||+|+|+|.++|......+... .....|+|.+.
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~ 97 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLE 97 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCC
Confidence 999999999999998753222211 23457888754
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=95.56 E-value=0.069 Score=44.97 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=52.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--CC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYG--IN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
+|..+++.. -+.+++.|+|..... .+ -..-.|.|...+...... ....+.. +-...+
T Consensus 7 ~P~~~~~~~-~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~-~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYTEA-VSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD-YKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEEEE-CSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG-CEEEEEE-----------------TTCSEE
T ss_pred CCceeEEEE-cCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc-eEEEEEc-----------------CCceEE
Confidence 455555422 246899999987632 00 112357777654321000 0011111 111246
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
+|++|+|+|.|..+|..-...|....|+...++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998765455556677777776
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.031 Score=50.44 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=32.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..++|+||+|+|.|..||......|.+.+|+...|+|.+.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 5678999999999999998654444456788889999864
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.017 Score=59.47 Aligned_cols=68 Identities=16% Similarity=0.227 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC---CCCEEEEcCcccccCCchhHHHHHHHhhhhh--hcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP 368 (619)
.|++++||.|.. ...+.++++... .-+.++++||+++. |..+ -+.+..+..+ ...-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVDR-GSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSSS-STTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCccCC-CcCh--HHHHHHHHHhhhhcCCc
Confidence 589999999854 234555555432 23569999999954 4332 1222222222 11235
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88999999953
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.043 Score=60.81 Aligned_cols=128 Identities=13% Similarity=0.132 Sum_probs=71.1
Q ss_pred EEEEEEeeccc--ceEEEEEeCCCC---CcEEEEeeccccc-cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccE
Q 007069 135 SLKLMLINQRS--DFSVALFSGGLL---KPKLVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAF 206 (619)
Q Consensus 135 ~~~~~l~n~r~--~~~f~~f~~~~~---~~~~~a~s~~~~~-~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~ 206 (619)
..++.|-+.+. .|.|++....-. .| -..|..+.+ ..+.+|..+.+ ...+.++++|+|......+. ..-.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~ 475 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYE 475 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEE
Confidence 34455556554 688887763211 11 001112222 24456777776 34457899999997632110 1235
Q ss_pred EEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 207 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 207 V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+|...+... ...+.. +....++|+||+|+|.|.+||......|...||+...|+|.+
T Consensus 476 V~y~~~~~~~-----~~~~v~-----------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 476 VTYRKKGDSN-----SYNVRR-----------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp EEEEEC--CC-----CCEEEE-----------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred EEEEECCCCc-----eEEEEc-----------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 6666543320 001111 112356799999999999999877656667789999999987
Q ss_pred C
Q 007069 287 Y 287 (619)
Q Consensus 287 ~ 287 (619)
.
T Consensus 534 ~ 534 (536)
T 3fl7_A 534 P 534 (536)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.041 Score=47.90 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=55.7
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeec---CCCCccccCcceEEecCCcCCCCCccccccCCC
Q 007069 171 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRK---GGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPG 245 (619)
Q Consensus 171 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 245 (619)
.-|.+|..+++.- ...++++|.|.-..+.. -..-.|+|... ....+... ... . ..+
T Consensus 16 ~~P~~P~~l~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~-----~~~-~------------~~~ 76 (124)
T 1wis_A 16 ELPGPPTNLGISN-IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-----HQL-S------------NEP 76 (124)
T ss_dssp CCCCCCEEEEEES-CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-----EEE-E------------SCT
T ss_pred CCCccCCCCEEEE-ecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEe-----eeE-c------------cCC
Confidence 3456666666532 34789999996654311 01235666542 11111110 000 0 011
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPYP 288 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~~ 288 (619)
....+++++|+|++.|.+||......|...+|.. ..++|.+.+
T Consensus 77 ~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 77 DARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 2346788999999999999987654455556654 467777643
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.11 Score=43.48 Aligned_cols=75 Identities=23% Similarity=0.290 Sum_probs=45.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++.. .+.+++.|+|.-... .-..-.|+|...+..... .... .++-.-..+|
T Consensus 2 p~~P~~l~~~~-~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~---~~~~-----------------~~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVTN-ITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE---TTVD-----------------LTSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC---EEEE-----------------ECTTEEEEEE
T ss_pred CccCCccEEEE-ecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc---eEEE-----------------ECCcceEEEE
Confidence 45677766543 347899999987642 112345677654321100 0000 1233457789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007069 253 KELWPNAMYTYKVGHRL 269 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~ 269 (619)
+||+|+|+|.++|....
T Consensus 60 ~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 60 TNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998753
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.071 Score=45.65 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=53.5
Q ss_pred CCCCCcce--eeecCCCCCcEEEEEEeCCCCCCCccEEEEe----ecCCCCccccCcceEEecCCcCCCCCccccccCCC
Q 007069 172 NPNAPVYP--RLAQGKTWNEMTVTWTSGYGINEAEAFVQWG----RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPG 245 (619)
Q Consensus 172 ~~~~P~~~--~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 245 (619)
.|.+|..+ .+. ..+.++++|+|....+ ...+...|. ..+ ..+. ... .. .++
T Consensus 17 ~P~~P~~~~~~~~-~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~------~~~-~~------------~~~ 73 (121)
T 1wf5_A 17 LPHAPEHPVATLS-TVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWT------VLL-AS------------VDP 73 (121)
T ss_dssp CCCCCSSCEEEEC-SSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCE------EEE-SS------------CCT
T ss_pred CCccCCCcceeeE-eccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCce------EeE-cc------------cCC
Confidence 46677776 432 2246899999987632 223444443 322 1111 000 00 012
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASPY 287 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p~ 287 (619)
.....+|+||+|+++|.|||......|...+|..- .++|++.
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred CccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 23457889999999999999876555555566654 4677654
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.097 Score=44.88 Aligned_cols=91 Identities=14% Similarity=0.130 Sum_probs=52.7
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.- -+.++++|+|..... .-..-.|+|....+.... .... ++-...++|+
T Consensus 9 ~pP~~l~~~~-vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~~----~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGFSD-VSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHSG----QTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEEES-CCSSCEEEEESCCSS-CCSEEEEEEEETTTCCBC----CEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEEEE-ccCCeEEEEeeCCCC-CccEEEEEEEeCCCCcee----EEEc-----------------CCCcCEEEcC
Confidence 4676666532 247899999976532 123346777654332110 0111 1122457899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
||+|+|+|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999865333332212 3368887433
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.072 Score=50.87 Aligned_cols=124 Identities=12% Similarity=0.036 Sum_probs=64.5
Q ss_pred ceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccE
Q 007069 133 KGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAF 206 (619)
Q Consensus 133 ~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~ 206 (619)
..+-+|+.+..=..|.|.+-.-.... ...|.++.| .-|.+|.-+++......+++.|+|..+.... .-.-.
T Consensus 68 ~~~C~~~~~~~~~~Y~~~V~a~N~~G---~~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~ye 144 (206)
T 3v6o_A 68 FYECIFQPIFLLSGYTMWIRINHSLG---SLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQ 144 (206)
T ss_dssp CEEEEECSCCTTSCEEEEEEEC---C---CEECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEE
T ss_pred CceEEeCcHHhcccEEEEEEEEcCCc---cccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEE
Confidence 33555654433456777765531110 011333222 3678888888776545789999998764311 01345
Q ss_pred EEEeecCC-CCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccce
Q 007069 207 VQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE 279 (619)
Q Consensus 207 V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~ 279 (619)
|+|...+. ..+.. .. . .......+.|.+|+|||+|..||......|.+.||+.
T Consensus 145 v~y~~~~~~~~w~~----~~-~---------------~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeW 198 (206)
T 3v6o_A 145 IRYGLSGKEVQWKM----YE-V---------------YDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNW 198 (206)
T ss_dssp EEEEESSSSCCCEE----EE-E---------------CC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCC
T ss_pred EEEEECCCCCceEE----Ee-c---------------ccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCC
Confidence 56655431 11111 00 0 0111235789999999999999998754455567654
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.16 Score=47.84 Aligned_cols=91 Identities=18% Similarity=0.059 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.|.+|..+.+. ..+.++++|+|....... -..-.|+|.. ....+.. ..+. ++....
T Consensus 109 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~---~~~~-----------------~~~~~~ 166 (209)
T 2vkw_A 109 EPSAPKLEGQM-GEDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKP---EIRL-----------------PSGSDH 166 (209)
T ss_dssp SCCCCEEEEEE-CTTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCC---CEEE-----------------CTTCCE
T ss_pred CCCCCcccccc-cccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCce---eeec-----------------CCCccE
Confidence 35566654432 334789999999863211 1123566665 2211110 0111 122245
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
.+|++|+|++.|.+||......|...+|+...+++
T Consensus 167 ~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 167 VMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 67999999999999998765555555666655554
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.052 Score=46.02 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=47.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++.. .+.++++|+|....... -..-.|+|...+...+..... .+....
T Consensus 8 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 66 (111)
T 1x5y_A 8 PTSAPQHLTVED-VTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERC 66 (111)
T ss_dssp CCCCCEEEEEEE-ECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSS
T ss_pred CCcCCCCCEEEe-ccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCccc
Confidence 455666555543 24689999998764311 112345565443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 278 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 278 (619)
..++++|+|+++|.|||......|...+|.
T Consensus 67 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 67 GFTVKDLPTGARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcc
Confidence 567899999999999998764333333443
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.31 E-value=0.091 Score=50.68 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=61.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
+.+|..+++.. .+.++++|+|....+ ....-.|+|...+..... ..... +.....+|
T Consensus 6 ~~~P~~l~~~~-~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i 62 (234)
T 3f7q_A 6 LGAPQNPNAKA-AGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVEL 62 (234)
T ss_dssp CCCCEEEEEEE-CSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEE
T ss_pred CCCCcceEEEE-cCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEE
Confidence 34666666543 246899999987632 223345677654332211 01110 11235678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC-CCCCCceEEEEEe
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-PGQNSLQRVVIFG 300 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~-~g~~~~~rf~v~G 300 (619)
++|+|+|.|.++|......|...+|....|+|... |.....+++...+
T Consensus 63 ~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~ 111 (234)
T 3f7q_A 63 TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVS 111 (234)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECS
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEec
Confidence 99999999999998765455556787888988743 2222335554433
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.14 Score=44.79 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=33.9
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...++|+||+|+|.|..+|..-...|.+.+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35688999999999999998765556667899999999764
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.25 E-value=0.035 Score=48.30 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=28.6
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPY 287 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~ 287 (619)
.+.+|+|++.|.|||......|...||.. ..|+|.+.
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 36799999999999987655566667776 47888764
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.12 Score=43.51 Aligned_cols=90 Identities=21% Similarity=0.229 Sum_probs=52.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++.-- +.+++.|+|.-... .-..-.|+|...++. .. ... .++-...++
T Consensus 7 ~p~~P~~l~v~~~-~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~----~~~-----------------~~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEAKEV-TPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ----EIL-----------------LPGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEEESC-CSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE----EEE-----------------ECSSCSEEE
T ss_pred CCCCCCceEEEec-cCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE----EEE-----------------ECCCccEEE
Confidence 4566766665432 36899999987542 112235666543221 10 000 012234678
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+||+|+++|.++|......|... .....|+|..
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~ 96 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGG 96 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCC
Confidence 999999999999998753333221 2346788864
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.051 Score=51.11 Aligned_cols=94 Identities=14% Similarity=0.064 Sum_probs=55.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCC-CCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++.. +.++++|+|....+... ..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 466788888766 68999999998642111 123566654322 1111100 0000 1111
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc-ceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWS-SEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S-~~~~F~T~p~ 287 (619)
...+ +|+|++.|.|||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 3345 999999999999876444555566 4577888753
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.024 Score=57.96 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=41.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP~~ 370 (619)
+++++||.|.. ...+.++++.. ...+-++++||+++. |..+ .+.+..+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~VDr-G~~s--~evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVDR-GKQS--LETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSSS-SSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCcccCC-CCCc--HHHHHHHHHHHhhCCCcEE
Confidence 58999999854 23455666543 345778999999954 4332 1222222222 2233589
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999963
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.069 Score=45.97 Aligned_cols=41 Identities=20% Similarity=0.038 Sum_probs=33.1
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...++|+||+|+|.|.++|......|...+|+...|+|.+.
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 34678999999999999998765556667888889999764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.17 Score=47.60 Aligned_cols=103 Identities=13% Similarity=-0.038 Sum_probs=55.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+.+.. .+.++++|+|....+.....-.|+|...+..... ...... +-....+|++
T Consensus 25 ~P~~l~~~~-~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSFVD-ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI---FEDFVD-----------------SSVGYYTVTG 83 (203)
T ss_dssp CCEEEEEEC-CTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCC---EEEEEE-----------------TTCCEEEECS
T ss_pred CCCccEEEe-cCCCEEEEEecCCCCCCccEEEEEEEECCCCCCc---eeEEcC-----------------CCccEEEeCC
Confidence 454444322 2468999999986531112345666654332110 000110 1123567899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEee
Q 007069 255 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 301 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 301 (619)
|+|++.|.++|...... +.|....+++...+.....+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~---g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNG---GESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSS---CBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCC---CccccEeeeecCCCcCCCceEEEEcCC
Confidence 99999999999876322 235555565544332333455554444
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.11 Score=49.03 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=57.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|..|..+.+. ....+++|.|...... ...+ .|+|...+...+.. ..+... ....-
T Consensus 113 ~P~~p~~~~~~--~~~~~~~l~w~~p~~~-~~~pi~~y~v~~~~~~~~~w~~----~~~~~~-------------~~~~~ 172 (215)
T 3mtr_A 113 TPSSPSIDQVE--PYSSTAQVQFDEPEAT-GGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASME 172 (215)
T ss_dssp CCCCCEEEEEE--EETTEEEEEEECCSCC-CSSCEEEEEEEEEETTCCCCEE----EEEEHH-------------HHHHH
T ss_pred CCCCCcceEEE--EecceEEEEEecCCcc-CCCceEEEEEEEEECCCCcccc----cccccc-------------ccccc
Confidence 35566555553 2357899999854321 1223 36666544332211 111100 00011
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 289 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 289 (619)
...+|.+|+|++.|.|||.....-|...+|....|+|+|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456789999999999999877555666788889999988654
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.14 Score=49.33 Aligned_cols=96 Identities=17% Similarity=0.227 Sum_probs=58.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-+.+|.-+++.... .+++.|+|....... .-.-.|+|...+. .+... ...+. ....
T Consensus 105 k~~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~-~~~~~-----------------~~~~ 164 (214)
T 2b5i_B 105 RLMAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEA-PLLTL-----------------KQKQ 164 (214)
T ss_dssp CCCCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTS-CCEEE-----------------CSCC
T ss_pred CCCCCceEEEEEec-CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhee-eeeee-----------------cccc
Confidence 34677777776543 468999998864210 0124566655432 12111 11111 1123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCC-C---ccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNS-T---YIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg-~---~~~S~~~~F~T~p~ 287 (619)
+.+.|.+|+||++|..||......| . ..||+...|+|.|.
T Consensus 165 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 165 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred eEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 5677899999999999999875322 2 36788899999874
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.89 E-value=0.031 Score=58.42 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 370 (619)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+ -+-+..+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~VD-RG~~s--~Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCccC-CCcCh--HHHHHHHHHhhhhcCCcEE
Confidence 58999999854 23345555542 34678999999995 44432 12222222221 123488
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.088 Score=44.80 Aligned_cols=89 Identities=16% Similarity=0.116 Sum_probs=48.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecC-CCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
-|.+|..+........+++.|+|....+ +....-|+... +..+...+. .. .+. .-
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~~---~~~Y~VyR~~~~~~~~~~i~~--~~-----------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAPG---ANSYNVKRSTKSGGPYTTIAT--NI-----------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCTT---CSEEEEEEESSTTCCCEEEEE--EE-----------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCCC---CCEEEEEEecCCCCCcEEEee--cC-----------------CCC--EE
Confidence 4667776665543345789999988532 44555565432 111111000 00 011 12
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
+.++|+||++|+|+|..-...|....|..-+.++
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~ 93 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEEC
Confidence 3489999999999998654333334455544443
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.048 Score=46.98 Aligned_cols=93 Identities=9% Similarity=-0.026 Sum_probs=55.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
+.+|..+++.. ..+++.|+|.-+.... -..-.|+|... +..+..... .+ ++-....
T Consensus 8 ~~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~--~~-----------------~~~~t~~ 65 (108)
T 1v5j_A 8 LSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDP--AV-----------------AGTETEL 65 (108)
T ss_dssp CCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEE--EE-----------------CSSCCEE
T ss_pred CCCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeee--ec-----------------CCCcCEE
Confidence 35666666654 3578999999875421 11236778762 222321110 01 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
++.+|.|+++|.+||..-...|....|+...++|...
T Consensus 66 ~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 66 LVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp ECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 6999999999999998764445445566667777654
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.13 Score=47.43 Aligned_cols=109 Identities=10% Similarity=0.018 Sum_probs=58.4
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 171 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 171 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
.-|.+|..+++.- .+.++++|+|........ ..-.|+|...+...+... ... ...
T Consensus 4 ~~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~----~~~-----------------~~~ 61 (197)
T 3lpw_A 4 DTPGPPQDLKVKE-VTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTV----ATN-----------------CHK 61 (197)
T ss_dssp CSCCCCEEEEEEE-ECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEE----EEE-----------------ECS
T ss_pred CCCCCCCCcEEEE-ecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEe----ecC-----------------CCc
Confidence 3466777666542 236899999988632111 123556655433222110 000 012
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC-CCCCCCceEEEEEee
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP-YPGQNSLQRVVIFGD 301 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p-~~g~~~~~rf~v~GD 301 (619)
...++++|+|++.|.|+|......|...++....+.|.. .|.....+++...++
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred cEEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 356789999999999999876544444455444444432 222223355544443
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.80 E-value=0.29 Score=47.79 Aligned_cols=96 Identities=20% Similarity=0.231 Sum_probs=59.7
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecC-CCCccccCcceEEecCCcCCCCCccccccCCC
Q 007069 171 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPG 245 (619)
Q Consensus 171 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 245 (619)
.-|.+|.-+.+......+++.|+|..+...+ .-.-.|+|.... ...+.. ... ..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~----v~~-----------------~~ 169 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTH----VNL-----------------SS 169 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEE----EEE-----------------SS
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEE----EEe-----------------cC
Confidence 3678888888777665677999999864211 113456666543 122211 000 11
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecC-CCC---ccccceEEEEcCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLF-NST---YIWSSEYQFKASPY 287 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~-dg~---~~~S~~~~F~T~p~ 287 (619)
......+.+|+|+++|..||..... .+. ..||+...|+|++.
T Consensus 170 t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 170 TKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp SEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred ceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 2234567899999999999987652 222 35677789999764
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.70 E-value=1.2 Score=50.52 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=31.8
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccce---EEEEcCCC
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE---YQFKASPY 287 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~---~~F~T~p~ 287 (619)
-...++|+||+|++.|.+||......|...+|.. ..|+|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987654455556655 77888654
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.64 E-value=0.16 Score=43.36 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=49.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.. .+.+++.|+|......+. ..-.|+|...+.... ...... .+....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSFSE-ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEEES-CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCCCCCceEEEE-CCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---eEEEEe-----------------CCCceE
Confidence 455666555532 246899999987642110 123455544322110 000110 123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEY 280 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~ 280 (619)
++|++|+|++.|.+||......|...||...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 7889999999999999876545555566654
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=94.59 E-value=0.063 Score=58.33 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC---CCCEEEEcCcccccCCchhHHHHHHHhhhh--hhcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~--l~~~vP 368 (619)
.|++++||+|.. ...+.++++... ..|.++++||+++ .|..+ .+.+..+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~vd-rG~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RGSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SSTTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEeccccC-CCcch--HHHHHHHHHHHhhCCCc
Confidence 689999999854 234555655432 2356999999995 44322 122222221 122457
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++.+.||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.59 E-value=0.035 Score=60.59 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 370 (619)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+ -+-+..+..+. ..-.++
T Consensus 84 pI~VIGDIHGq---------------~~dL~~LL~~~g~p~~d~yVFLGDyVD-RGp~S--~Evl~lL~aLk~~~P~~v~ 145 (521)
T 1aui_A 84 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 145 (521)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SSSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceeeccCCCCC---------------HHHHHHHHHhcCCCCcceEEEcCCcCC-CCCCH--HHHHHHHHHHhhhCCCeEE
Confidence 58999999854 23344555432 34688999999995 44432 12222222221 123488
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 146 lLRGNHE~~ 154 (521)
T 1aui_A 146 LLRGNHECR 154 (521)
T ss_dssp ECCCTTSSH
T ss_pred EecCCccHH
Confidence 999999964
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.56 E-value=0.1 Score=50.48 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=57.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|.-+++......+++.|+|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4678888887765457899999988753110 12356665443222211 0000 01123
Q ss_pred EEEecCCCCCCEEEEEEeeecCC----CC-ccccceEEEEcC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFN----ST-YIWSSEYQFKAS 285 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~d----g~-~~~S~~~~F~T~ 285 (619)
.+.|.+|+||++|..||...... |. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 56789999999999999987421 11 467788889983
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.15 Score=42.02 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=49.8
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.- .+.++++|+|..... .-..-.|+|....+.... ..... ++-...++|+
T Consensus 3 ~~P~~l~v~~-~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (98)
T 3teu_A 3 DAPTDLQVTN-VTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTIT 60 (98)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEEC
T ss_pred CCCCceEEEE-ecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEec
Confidence 3566665532 235899999987632 112346777643321110 00111 1123457899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
||+|++.|.++|..... .+.|+...+.+.+
T Consensus 61 ~L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~ 90 (98)
T 3teu_A 61 GLTPGVEYVVSVYALKD---NQESPPLVGTQTT 90 (98)
T ss_dssp SCCTTCEEEEEEEEEET---TEECCCEEEEEEC
T ss_pred CCCCCCEEEEEEEEEeC---CCCCCCeEEEecc
Confidence 99999999999987632 2346555555444
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.54 E-value=0.25 Score=42.58 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=50.2
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCc----cc-cCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 175 APVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRT----HS-PAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 175 ~P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~----~~-~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
+|..++ +.+ +.++++|+|....+ .-..-.|+|....+... .. ....... ++-..
T Consensus 11 ~p~~L~--v~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v-----------------~~~~t 70 (112)
T 2cui_A 11 RLSQLS--VTDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELMV-----------------PGTRH 70 (112)
T ss_dssp CCCCCE--EESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEEE-----------------ETTCC
T ss_pred CCCceE--EEeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEEc-----------------CCCcC
Confidence 344444 433 47899999987542 12345678875433100 00 0001111 12234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
.++|+||+|||+|..+|......+.. -.-....+|.+.+
T Consensus 71 ~~~l~gL~PgT~Y~~~V~A~~~~~~s-~p~~~~~~T~~~~ 109 (112)
T 2cui_A 71 SAVLRDLRSGTLYSLTLYGLRGPHKA-DSIQGTARTLSGP 109 (112)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSEE-EEEEEEEECCCCS
T ss_pred EEEeCCCCCCCEEEEEEEEEECCccc-CCEEEEEEECCCC
Confidence 78899999999999999865322211 1223456676543
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.51 E-value=0.19 Score=49.86 Aligned_cols=106 Identities=13% Similarity=-0.018 Sum_probs=59.0
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++.. .+.++++|+|....+ ....-.|+|...+..... ..... ++-.....|
T Consensus 21 p~~P~~l~~~~-~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i 78 (290)
T 3r8q_A 21 IPAPTDLKFTQ-VTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVV 78 (290)
T ss_dssp CCCCEEEEEEE-ECSSCEEEEEECCSS-CCCEEEEEEEESSSSSCC---EEEEE-----------------CTTCCEEEE
T ss_pred CCCCCceEEEE-CCCCEEEEEEeCCCC-CeeEEEEEEEeCCCCCce---EEEEc-----------------CCCccEEEe
Confidence 45566665533 246899999998642 122346677654322110 00111 112346778
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEee
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 301 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 301 (619)
++|+|++.|.++|......|...++ ...|+|.+.+.....+++...++
T Consensus 79 ~~L~p~t~Y~~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 79 SGLMVATKYEVSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp CSCCSSCEEEEEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 9999999999999876444433333 35677765443333344443333
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.04 Score=47.60 Aligned_cols=79 Identities=14% Similarity=0.089 Sum_probs=45.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++.- .+.++++|.|..+.... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIED-VWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEEE-EETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEEE-ecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 456777766542 23579999998764311 112356666543322211100 01122
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNS 272 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg 272 (619)
..++++|+|++.|.|||......|
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n~~G 98 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSENMCG 98 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCSSSC
T ss_pred EEEECCCCCCCEEEEEEEEeeCCc
Confidence 356899999999999998753333
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.42 E-value=0.22 Score=42.96 Aligned_cols=24 Identities=17% Similarity=0.281 Sum_probs=20.2
Q ss_pred eEEEEEecCCCCCCEEEEEEeeec
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
-...++++||+|++.|.+||....
T Consensus 69 ~~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 69 KSFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEEECSCCSSEEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEEEe
Confidence 345788999999999999998753
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.36 E-value=0.13 Score=52.84 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=52.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++......++++|.|....+.....-.|+|....+..... ..... .+.....+|
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45677777765433457999999864211223466666543321100 00001 112346789
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
++|+|++.|.|+|...... ++|...+..+.+.
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIPA 94 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecCC
Confidence 9999999999999875322 3454444554443
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=94.29 E-value=0.21 Score=50.81 Aligned_cols=92 Identities=12% Similarity=0.131 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCC-CCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCe
Q 007069 172 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246 (619)
Q Consensus 172 ~~~~P~~~~La~~~-~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 246 (619)
-|.+|..+++.... +.+++.|+|..+...... .-.|+|...+...+... .. .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~------~~---------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW------MV---------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE------EC---------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE------cc---------------cCC
Confidence 46778777776543 468999999987532111 23566665433222110 00 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccc---cceEEEEc
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIW---SSEYQFKA 284 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~---S~~~~F~T 284 (619)
....+|.+|+|++.|..||......|.+.| |+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 235678999999999999997654344444 44444444
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.22 Score=46.51 Aligned_cols=91 Identities=15% Similarity=0.245 Sum_probs=51.6
Q ss_pred CCcceeeec-CCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 175 APVYPRLAQ-GKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 175 ~P~~~~La~-~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
+|..+++.- +...++++|.|....+..-..-.|+|......... ..... ++-...++|+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 61 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW---KEATI-----------------PGHLNSYTIK 61 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCC---EEEEE-----------------CTTCCEEEEC
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCce---EEEec-----------------CCCccEEEec
Confidence 466666543 22378999999986321122346677654321110 01111 1122367899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
||+|++.|.++|......|...++ ...|+|.+
T Consensus 62 ~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~~ 93 (201)
T 2ha1_A 62 GLKPGVVYEGQLISIQQYGHQEVT-RFDFTTTS 93 (201)
T ss_dssp SCCTTEEEEEEEEEECTTSCEEEE-EEEEEECC
T ss_pred CCCCCCEEEEEEEEEecccccCce-eEEEecCC
Confidence 999999999999876434443333 45666643
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.09 E-value=0.25 Score=45.39 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=51.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++.. .+.++++|+|....+ ....-.|+|...++... .... ++-....+
T Consensus 6 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEVSD-PTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEEEe-cCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 456777776643 246899999987643 12334566663221110 0111 11123467
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPYP 288 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~~ 288 (619)
|+||+|++.|.++|.... + .+.|. ...++|.|.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~--~-~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEK--G-RHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EESCCSSCEEEEEEEEES--S-SCBCCCEEEEEECCCCC
T ss_pred ECCCCCCCEEEEEEEEEc--C-CccCCCEEEEEECCCCC
Confidence 899999999999998753 2 22343 4567776543
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.85 E-value=0.27 Score=40.12 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=41.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.- .+.++++|+|.-... .-..-.|+|...++... .. +.. ..+-...++|+|
T Consensus 4 ~P~~l~~~~-~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~-------~~-----~~~--------~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFTD-VDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIH-------EL-----FPA--------PDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEEE-EETTEEEEECCCCSS-CCSCEEEEEEETTTEEE-------EE-----CCC--------CCSSCCEEEECS
T ss_pred CCCccEEEe-ecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCc-------eE-----Eec--------CCCCccEEEeCC
Confidence 455555542 235899999966531 11234566765322100 00 000 012245678999
Q ss_pred CCCCCEEEEEEeeec
Q 007069 255 LWPNAMYTYKVGHRL 269 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~ 269 (619)
|+||++|.++|....
T Consensus 62 L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 62 LRPGSEYTVSVVALH 76 (94)
T ss_dssp CCCCSEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEc
Confidence 999999999998753
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.87 Score=49.59 Aligned_cols=133 Identities=14% Similarity=0.199 Sum_probs=74.4
Q ss_pred ceEEEEEEeecccceEEEEEeCCCCCcE--EEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEE
Q 007069 133 KGSLKLMLINQRSDFSVALFSGGLLKPK--LVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQ 208 (619)
Q Consensus 133 ~~~~~~~l~n~r~~~~f~~f~~~~~~~~--~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~ 208 (619)
..+..|..+.....|.|.+-........ .+.. ....-..|.+|..+++.. .+.+++.|+|....... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~-~~~~~VkP~PP~nl~v~~-~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILV-NITEKVYPHTPTSFKVKD-INSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEE-CGGGGBCCCCCEEEEECC-SSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEE-EeccccCCCCCeeeEEEE-ecCCeEEEEECCCCCCCCceEEEEEE
Confidence 4456666554455677776653211110 0111 111123577887777653 24689999999864211 0135678
Q ss_pred EeecCCCC-ccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEc
Q 007069 209 WGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQFKA 284 (619)
Q Consensus 209 yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~F~T 284 (619)
|...+... +.. .++. + ...-.+.+.|.+|+|+|+|..||... .+|. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~-----~---------~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ-----G---------VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB-----C---------CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe-----c---------cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 87654321 110 0000 0 00123456789999999999999987 4454 46788888988
Q ss_pred CC
Q 007069 285 SP 286 (619)
Q Consensus 285 ~p 286 (619)
+.
T Consensus 480 ~E 481 (483)
T 3e0g_A 480 TE 481 (483)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=93.54 E-value=0.4 Score=45.11 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=51.0
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.- .+.+++.|+|..... .-..-.|+|........ ....+. ++-...++|+
T Consensus 105 ~~P~~l~v~~-~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEVVA-ATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEEEE-EETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEEEe-CCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 3455454422 236899999976542 11234566765432210 000111 1123567899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
||+|+|+|.++|..-...|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999765555555566555554
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.40 E-value=0.21 Score=43.57 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=44.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++.- .+.+++.|+|.-... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~~-~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVVA-ATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEEE-ECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEEe-cCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45677666643 346899999987642 11234566765433210 000111 112346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007069 253 KELWPNAMYTYKVGHR 268 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~ 268 (619)
+||+|||+|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.31 E-value=0.37 Score=46.47 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC-------CCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCC
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI-------NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 244 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~ 244 (619)
-|.+|..+.+.. .+.+.|+|..+... ..-.-.|+|...+. .+.......... ..
T Consensus 100 kp~PP~nltv~~---~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVTF---SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------VD 160 (219)
T ss_dssp CCCCCEEEEEEE---SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC---------------SS
T ss_pred EeCCCCceEEEe---CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe---------------cC
Confidence 567888666652 46999999986421 01234566665542 221110000000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC---c---cccceEEEEcCCC
Q 007069 245 GYIHTSFLKELWPNAMYTYKVGHRLFNST---Y---IWSSEYQFKASPY 287 (619)
Q Consensus 245 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~---~~S~~~~F~T~p~ 287 (619)
+....+.+.+|+||++|..||......|. + .||+...|+|++.
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 23556778999999999999987654332 3 4678899999875
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.27 E-value=0.24 Score=43.19 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=50.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.-. + ++++|+|.-....+ -..-.|+|.. +.. ...... -++-...
T Consensus 27 ~P~~P~~l~~~~~-~-~sv~l~W~~P~~~~g~i~~Y~v~y~~-~~~------~~~~~~---------------~~~~~~~ 82 (126)
T 1x5i_A 27 VPEVPSSLHVRPL-V-TSIVVSWTPPENQNIVVRGYAIGYGI-GSP------HAQTIK---------------VDYKQRY 82 (126)
T ss_dssp CCCSCSEEEEEEE-T-TEEEEEEECCSCTTBCCCEEEEEECS-SCG------GGEEEE---------------CCTTCCE
T ss_pred CCCCCCeeEEEec-C-CEEEEEEcCCCCCCCCEeEEEEEEEc-CCC------CceEEE---------------eCCCeeE
Confidence 3556767776554 3 89999998864211 0122455542 110 000000 0123356
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
.+|++|+|+++|.++|......|...++.. .++|.+
T Consensus 83 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~ 118 (126)
T 1x5i_A 83 YTIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRP 118 (126)
T ss_dssp EEECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCC
T ss_pred EEEeCCCCCCEEEEEEEEEeCCccCcceee-EEeccc
Confidence 789999999999999987644444444432 455544
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.10 E-value=0.51 Score=39.16 Aligned_cols=84 Identities=18% Similarity=0.344 Sum_probs=52.9
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCcccccc---CCCeEEEE
Q 007069 175 APVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWR---DPGYIHTS 250 (619)
Q Consensus 175 ~P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~---~~g~~h~a 250 (619)
.|.|+-++-.. .+++-.|.|.......-..-.+.|+.+.... -|+ -|+.+..-
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g-----------------------~Wke~~Ip~h~nSY 63 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVG-----------------------RWKEATIPGHLNSY 63 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSS-----------------------CCEEEEECSSCCEE
T ss_pred cceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCC-----------------------ceeEEEecCccceE
Confidence 46666665544 3899999999974310012334444432210 122 25677788
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce--EEEEc
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKA 284 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T 284 (619)
+|+||+||..|.=+|-+.. ..+|+++ +.|.|
T Consensus 64 tI~GL~P~~~YE~qv~S~~---ryG~~Evs~f~FtT 96 (98)
T 1oww_A 64 TIKGLKPGVVYEGQLISIQ---QYGHQEVTRFDFTT 96 (98)
T ss_dssp EECSCCSSEEEEEEEEEEE---SSSCEEEEEEEEEE
T ss_pred EEecCCCCcEEEEEEEEee---ccCcccceEEEEEe
Confidence 8999999999999998874 3567764 55555
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=92.99 E-value=0.36 Score=45.33 Aligned_cols=95 Identities=16% Similarity=0.270 Sum_probs=49.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCCccccc-cCCCeEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGW-RDPGYIH 248 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~-~~~g~~h 248 (619)
+.+|..+++.- .+.++++|+|....... ...-.|+|...+. ..+........+.. +. + ...+-..
T Consensus 2 ~~pP~~~~~~~-~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~----~~~~~~~~~ 70 (214)
T 2ibg_A 2 TYPPTPPNVTR-LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PK----WNSELGKSF 70 (214)
T ss_dssp CCCCCCCEEEE-EETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SS----CSSSSEEEE
T ss_pred CCCCCCCEeeE-ecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------cc----cccccCcce
Confidence 34666666533 24689999998764311 0123455554332 22211111111000 00 0 0113456
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 278 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 278 (619)
..++++|+|++.|.|||......|...+|.
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~ 100 (214)
T 2ibg_A 71 TASVTDLKPQHTYRFRILAVYSNNDNKESN 100 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCEEECC
T ss_pred eEEecCCcCCCEEEEEEEEEecCCCCCCCC
Confidence 778999999999999998654334433444
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=92.93 E-value=0.27 Score=53.70 Aligned_cols=133 Identities=14% Similarity=0.154 Sum_probs=74.5
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--Cc
Q 007069 132 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AE 204 (619)
Q Consensus 132 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~ 204 (619)
+..+.+|.+...-..|.|.+..-..... ..| .+.| .-|.+|.-+++.. .+.+++.|+|........ -.
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~---~~S-~~~~~~~~~v~P~PP~nl~v~~-~s~~sl~LsW~pP~~~~g~~l~ 419 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ---AQS-AVVINVTERVAPHDPTSLKVKD-INSTVVTFSWYLPGNFTKINLL 419 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE---EEE-EEECCGGGTBCCCCCEEEEEEE-CSTTCEEEEEEEEEECSSSEEE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC---ccc-eEEEEecCCCCCCCCeEEEEEe-cCCCEEEEEEeCCCCCCCcceE
Confidence 3456666665433577877765211100 111 1222 2467777777643 347899999987642110 12
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEE
Q 007069 205 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQ 281 (619)
Q Consensus 205 ~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~ 281 (619)
-.|+|...+...+.. ..+... .....+.+.|.+|+|+|+|..||.... .|. ..||+...
T Consensus 420 YeV~Yr~~~~~~w~~---~~~~~~--------------~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~ 481 (488)
T 2q7n_A 420 CQIEICKANSKKEVR---NATIRG--------------AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKR 481 (488)
T ss_dssp EEEEEBCTTSCCEEE---EEEEEC--------------CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCC
T ss_pred EEEEEEECCCCCceE---EEEEec--------------CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEe
Confidence 345555443221100 011100 012356779999999999999998776 555 36777888
Q ss_pred EEcCCC
Q 007069 282 FKASPY 287 (619)
Q Consensus 282 F~T~p~ 287 (619)
|+|++.
T Consensus 482 ~~T~e~ 487 (488)
T 2q7n_A 482 HLTTEA 487 (488)
T ss_dssp BCCCCC
T ss_pred EECCCC
Confidence 988763
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=92.85 E-value=0.41 Score=49.14 Aligned_cols=102 Identities=15% Similarity=-0.001 Sum_probs=54.7
Q ss_pred CCCcceeeecCCCCC-cEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 174 NAPVYPRLAQGKTWN-EMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 174 ~~P~~~~La~~~~~~-~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
.+|..+.+.... .+ +++|+|..........-.|+|....+..... ..... ++-.....|
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCC--EEEEE-----------------ETTCCEEEE
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcc--eeEEc-----------------CCCccEEEE
Confidence 456666654433 45 9999998764211223466776543321100 00011 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEE
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVI 298 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v 298 (619)
++|+|++.|.++|..... .++|....+.+.+.......+++..
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~~~~p~p~~l~~~~ 106 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTIIPEVPQLTDLSFVD 106 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEECCCCCCCSCCEEEC
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEcCCCCCCceEEEEe
Confidence 999999999999987532 2346555555543222223344443
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=92.85 E-value=0.38 Score=40.08 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=43.5
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCC-CCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGI-NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~-~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
.+|..+++.- .+.++++|.|...... .-..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v~~-~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEVVA-ATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEEEE-EETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEEee-cCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 4566666532 2368999999876420 11123577765432210 001111 112346789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007069 253 KELWPNAMYTYKVGHRL 269 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~ 269 (619)
+||+||++|.++|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998653
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.71 E-value=0.15 Score=56.22 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=59.2
Q ss_pred CCCCCcceeeec-CCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 172 NPNAPVYPRLAQ-GKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 172 ~~~~P~~~~La~-~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
-|.+|..+++.. ....++++|+|........ ..-.|+|...++..+...... ...+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~------------------~~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------------------DTASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT------------------SSCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc------------------cCcCcee
Confidence 467888787753 3357899999986542110 123556665443322211000 0012235
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p~ 287 (619)
..++++|+|+|.|.+||......|... ||+...|+|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 667899999999999998765445443 467777888764
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=92.61 E-value=0.32 Score=40.44 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=41.3
Q ss_pred CcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCC
Q 007069 176 PVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKEL 255 (619)
Q Consensus 176 P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL 255 (619)
|..+++. ..+.++++|+|....+ .-..-.|+|...+.... ...... ++-.-.++|+||
T Consensus 5 P~~l~v~-~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~~-----------------~~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVVS-EVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGE---AINLTV-----------------PGSERSYDLTGL 62 (98)
T ss_dssp CEEEEEE-SCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSC---CEEEEE-----------------ETTCSEEEECSC
T ss_pred CCceEEE-ecCCCeEEEEecCCcC-ccceEEEEEEECCCCCc---eEEEEc-----------------CCCcCEEEECCC
Confidence 4444443 2247899999987643 11234577775432110 000111 112235789999
Q ss_pred CCCCEEEEEEeee
Q 007069 256 WPNAMYTYKVGHR 268 (619)
Q Consensus 256 ~P~t~Y~Yrvg~~ 268 (619)
+|+|.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999875
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.34 E-value=0.74 Score=45.11 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=58.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++... +.++++|+|..... ....-.|+|......... ..... ++......
T Consensus 14 ~p~~P~~l~~~~~-~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILVRDV-SDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEEEEE-CSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEEEec-CCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 4567777765432 35899999988641 122346777543221110 01111 12234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEee
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 301 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 301 (619)
|++|+|++.|.++|......|... .....|+|+|.+. ..+++...++
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 118 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAP--KNLRVGSRTA 118 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCC--CceEEEecCC
Confidence 899999999999998764332221 2345677766432 2355544443
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=92.33 E-value=0.42 Score=41.11 Aligned_cols=74 Identities=26% Similarity=0.432 Sum_probs=44.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++.- .+.++++|+|....+ .-..-.|+|...++... ....+. ++-...++|
T Consensus 4 P~~P~~L~v~~-~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVVA-ATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEEE-EETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45666666543 236899999987642 12234677776433210 001111 122346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007069 253 KELWPNAMYTYKVGHR 268 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~ 268 (619)
+||+|+|+|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.10 E-value=0.39 Score=40.25 Aligned_cols=75 Identities=25% Similarity=0.430 Sum_probs=44.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
+.+|..+++.- .+.++++|+|...... .-..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~~-~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVVD-ATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEEE-EETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEEe-cCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 45677766642 2468999999876421 01123577765432110 000111 1223567
Q ss_pred EecCCCCCCEEEEEEeee
Q 007069 251 FLKELWPNAMYTYKVGHR 268 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~ 268 (619)
+|+||+|+|+|..+|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999875
|
| >2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.09 E-value=1.7 Score=37.89 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=56.6
Q ss_pred EeeCCCcEEEEccceecccCccccEEEEEEeCC-CCCCCCEEEEEeCCCCCCCCCCCCCCCCCCCCccCCCceeEEeccC
Q 007069 46 YALNDNAYVKASPAVVGLKGQNSEWVTVEYSSP-NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYS 124 (619)
Q Consensus 46 ~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 124 (619)
+..++..+|++|-.-... | .+|.+.|.|.-- .-.+.||||+|--.. +||. ..+.|+-
T Consensus 29 vt~~sRSsLt~S~~~yti-G-~~q~lvI~WDIKEev~a~DWIGLy~ide----~~~~------------n~ld~kn---- 86 (138)
T 2lfe_A 29 VTSESRSSLTASMYEYTL-G-QAQNLIIFWDIKEEVDPSDWIGLYHIDE----NSPA------------NFWDSKN---- 86 (138)
T ss_dssp ----CCCEEEESCSEEET-T-CSCCEEEEEECCSCCCTTCEEEEEECCS----SCTT------------CCCEECC----
T ss_pred ecccccceeEEEeeEEEe-c-CCCcEEEEEeccCccCccceEEEEEecC----CCcc------------chhhhhc----
Confidence 344666777777654322 2 235699999984 788999999997643 3332 1122211
Q ss_pred CCCcccccceEEEEEEee----cc--cceEEEEEeCCCCCcEEEEeeccccccCC
Q 007069 125 SPQYKGTGKGSLKLMLIN----QR--SDFSVALFSGGLLKPKLVAVSNKIAFTNP 173 (619)
Q Consensus 125 ~~~~~~~g~~~~~~~l~n----~r--~~~~f~~f~~~~~~~~~~a~s~~~~~~~~ 173 (619)
-+-..+=+|.+.-.+-. ++ .-.-|.++.+... .|-|.++.++..||
T Consensus 87 -Rgvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 87 -RGVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp -TTCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred -cccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 11111223433333211 22 2467888887544 67788888877765
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.95 E-value=4.5 Score=37.23 Aligned_cols=23 Identities=17% Similarity=0.197 Sum_probs=19.5
Q ss_pred EEEEEecCCCCCCEEEEEEeeec
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
....+|+||+||+.|.++|....
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 35678999999999999998754
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=91.81 E-value=0.71 Score=44.61 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=25.7
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
-+++||+|+|+|.|+|.....+|...-++.-.+||
T Consensus 202 yt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrT 236 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRT 236 (238)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEEC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEe
Confidence 35799999999999999776666543334556665
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.75 E-value=0.42 Score=40.91 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=43.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.-. + ++++|+|......+ -..-.|+|....... ..... ++-...
T Consensus 17 ~P~~P~~l~~~~~-~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~-----------------~~~~~~ 72 (116)
T 2edb_A 17 VPDQPSSLHVRPQ-T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRV-----------------DSKQRY 72 (116)
T ss_dssp CCCCCSCEEEEEC-S-SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEE-----------------ETTCCE
T ss_pred CCCCCCCeEEEEC-C-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEe-----------------CCCeeE
Confidence 3567777776554 3 89999998764311 012355665321100 00111 112345
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007069 250 SFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
.+|++|+|+++|.++|....
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp EEECSCCSSSBEEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEe
Confidence 67899999999999998754
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=91.50 E-value=4.8 Score=39.23 Aligned_cols=107 Identities=12% Similarity=0.126 Sum_probs=55.2
Q ss_pred cceEEEEEe---CCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccC
Q 007069 145 SDFSVALFS---GGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPA 221 (619)
Q Consensus 145 ~~~~f~~f~---~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~ 221 (619)
..|.|.+.. .|.+.|..+..... ....|..|..++.... .++++|+|..... ....-.|+|...+.....
T Consensus 72 t~Y~~~V~A~n~~G~s~~s~~~~~~~-~~~~~~p~~~~~~~~~--~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~--- 144 (290)
T 3l5i_A 72 DRYLATLTVRNLVGKSDAAVLTIPAC-DFQATHPVMDLKAFPK--DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC--- 144 (290)
T ss_dssp SCEEEEEEEEESSCBCCCEEEEECCT-TCCCCCCCEEEEEEEE--TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC---
T ss_pred ceEEEEEEEEcCCCCCCCceEEeecc-cccCCCccceeEEEeC--CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC---
Confidence 567777665 23344443322211 0112333344444333 3699999988643 223456777654332110
Q ss_pred cceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCC
Q 007069 222 GTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNS 272 (619)
Q Consensus 222 ~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg 272 (619)
...+... .........+++|+|++.|.++|......|
T Consensus 145 -~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g 181 (290)
T 3l5i_A 145 -ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVTPVYADG 181 (290)
T ss_dssp -CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEEEEETTE
T ss_pred -CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEEEEeCCc
Confidence 0001000 012235566899999999999998764333
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=91.45 E-value=0.34 Score=39.99 Aligned_cols=74 Identities=20% Similarity=0.344 Sum_probs=44.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
+.+|..+++.- .+.+++.|+|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~~-~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVVA-ATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEEE-EETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45677766643 246899999987532 11224567765433210 001111 122346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007069 253 KELWPNAMYTYKVGHR 268 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~ 268 (619)
+||+|+|+|..+|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=90.96 E-value=2.2 Score=43.53 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=64.2
Q ss_pred EEEEeecc--cceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007069 137 KLMLINQR--SDFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 211 (619)
Q Consensus 137 ~~~l~n~r--~~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 211 (619)
.+.|-+.+ ..|.|.+... |.+.+..+... ..+.+|..+++.. ...++++|+|..........-.|+|..
T Consensus 151 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~-----t~~~~p~~l~~~~-~~~~si~l~W~~p~~~~i~~Y~v~~~~ 224 (375)
T 3t1w_A 151 YYTVTGLEPGIDYDISVITLINGGESAPTTLTQQ-----TAVPPPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSP 224 (375)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEECCCEEEEEE-----CCCCCCEEEEEES-CCSSCEEEEEECCSSCCCCEEEEEEEE
T ss_pred eEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeee-----cCCCCCceeEEEe-cccCEEEEEEcCCCCCCccEEEEEEEe
Confidence 33444444 3577776653 22233222111 1344666666542 247899999988532222345666765
Q ss_pred cCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 212 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 212 ~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.+.... ...... .+-....++++|+|++.|.++|......|.... ....++|.|.
T Consensus 225 ~~~~~~---~~~~~~-----------------~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 225 VKNEED---VAELSI-----------------SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp GGGTTC---CEEEEE-----------------CTTCCEEEECSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred CCCCCC---cEEEEc-----------------CCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 432110 000111 112346778999999999999987543332221 2344566553
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.14 E-value=0.76 Score=39.43 Aligned_cols=37 Identities=14% Similarity=-0.049 Sum_probs=30.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
.+.+. |+|++.|.+||......|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45667 99999999999876666767788888899865
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.05 E-value=0.16 Score=42.77 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=43.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.|.+|..+++.- .+.+++.|+|..... .-..-.|+|....+... .... .-++-...++
T Consensus 7 ~p~~P~~l~v~~-~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~-----------------~v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALAS-ETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGP---EKSV-----------------SVPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEEE-EETTEEEEEEECCSS-CCSBBCBBCCCTTSCSC---CCCB-----------------CCBTTSSEEE
T ss_pred CCCCCCceEEEe-CCCCEEEEEEeCCCC-cceEEEEEEEECCCCCc---cEEE-----------------EeCCCcCEEE
Confidence 456777777642 236899999988632 11123444543222100 0000 0112235678
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007069 252 LKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~ 269 (619)
|+||+|+|+|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998653
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.02 E-value=1 Score=41.90 Aligned_cols=90 Identities=13% Similarity=-0.021 Sum_probs=50.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--CC--CCccEEEEeecCCCC-ccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYG--IN--EAEAFVQWGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~--~~--~~~~~V~yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
+|..+++.. .+.+++.|+|..... .+ -..-.|+|...+... +.. ... .......
T Consensus 107 ~P~~~~~~~-~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~----~~~----------------~~~~~~~ 165 (205)
T 1cfb_A 107 NPDNVVGQG-TEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNI----------------FDWRQNN 165 (205)
T ss_dssp CCSCCEEEC-SSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEE----------------CCTTCCE
T ss_pred CCeeeEeec-CCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEE----EEe----------------cCCCccE
Confidence 455555432 346899999987531 00 112356666543321 110 000 0112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEcC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYI-WSSEYQFKAS 285 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~-~S~~~~F~T~ 285 (619)
.+|++|+|++.|.+||......|... +|+...++|.
T Consensus 166 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 166 IVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp EEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred EEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 67899999999999998765445444 3556666664
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=89.64 E-value=0.52 Score=50.52 Aligned_cols=87 Identities=23% Similarity=0.410 Sum_probs=49.2
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
..|..+|+.- .+.++++|+|..+.+..-..-.|+|..+.... .....+. ++--.+++|+
T Consensus 371 ~~~~~l~~~~-~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~---~~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEVVA-ATPTSLLISWDASYSSSVSYYRITYGETGGNS---PVQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEEEE-ECSSCEEEECCCTTGGGCSEEEEEEEETTCCS---CCEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEEec-cCCCeEEEEecCCCCCcceEEEEEEEECCCCc---cceEEEe-----------------cCCCceEEec
Confidence 4566677532 34689999998762111123456676653211 0011111 1223678999
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEE
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSEYQF 282 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 282 (619)
||+|||+|..+|...... -+..|....|
T Consensus 430 ~L~p~t~Y~~~v~a~~~~-~g~~s~~~~~ 457 (461)
T 3csg_A 430 GLSPGVDYTITVYAYSYY-YYYYSSPISI 457 (461)
T ss_dssp SCCTTCEEEEEEEEECTT-SCBCSCCEEE
T ss_pred CCCCCCEEEEEEEEEecc-CCCCCCCEEE
Confidence 999999999999876322 2224554444
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.64 E-value=3.9 Score=46.31 Aligned_cols=130 Identities=10% Similarity=0.056 Sum_probs=68.7
Q ss_pred EEEEeeccc--ceEEEEEeC-----CCCCc--EEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCC----CCC
Q 007069 137 KLMLINQRS--DFSVALFSG-----GLLKP--KLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGI----NEA 203 (619)
Q Consensus 137 ~~~l~n~r~--~~~f~~f~~-----~~~~~--~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~----~~~ 203 (619)
++.|.+.+. .|.|++... |...| .+....... ..|.+|..+.+.. .+.++++|+|...... ...
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~--~p~~~P~~~~~~~-~~~~sv~l~W~~p~~~~~~~~~~ 393 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA--DPMRGPRKLEVVE-VKSRQITIRWEPFGYNVTRCHSY 393 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC--CCSCCCEEEEEEE-ECSSCEEEEEECCCHHHHCSSSC
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC--CCCCCCceeEEEe-ccCCeEEEEEECCCcccccceee
Confidence 344445443 688877653 22221 122222211 2235676665542 2468999999875210 001
Q ss_pred ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEE
Q 007069 204 EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFK 283 (619)
Q Consensus 204 ~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~ 283 (619)
.-.|+|............ .... ..++.....+|++|+|++.|.++|......|.. .|....++
T Consensus 394 ~y~v~y~~~~~~~~~~~~---~~~~-------------~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~ 456 (731)
T 2v5y_A 394 NLTVHYCYQVGGQEQVRE---EVSW-------------DTENSHPQHTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQ 456 (731)
T ss_dssp EEEEEEEEESSSSEEEEE---EEEC-------------CSSCSSCEEEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEE
T ss_pred eEEEEEEEccCCCCccce---eEEE-------------EecCCcceEEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEE
Confidence 235777654322110000 0000 011223456899999999999999876544543 47778888
Q ss_pred cCC
Q 007069 284 ASP 286 (619)
Q Consensus 284 T~p 286 (619)
|..
T Consensus 457 T~~ 459 (731)
T 2v5y_A 457 TDE 459 (731)
T ss_dssp CCC
T ss_pred ccC
Confidence 865
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=89.41 E-value=0.99 Score=45.43 Aligned_cols=105 Identities=13% Similarity=0.219 Sum_probs=57.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|.-+++.. ..+++.|+|........ -.-.|+|...++..+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~~--~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLSF--HNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEEE--ETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEEE--cCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 477888777763 35799999998752111 12356666543332210 0110111221000 001134567
Q ss_pred EEecCCCCCCEEEEEEeeecC------CCC-ccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLF------NST-YIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~------dg~-~~~S~~~~F~T~p 286 (619)
..|.+|+|+++|..||..... .|. ..||+...|.+.+
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 889999999999999997653 232 3566667775543
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=89.33 E-value=2.8 Score=42.70 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=55.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
-|.+|..+.+.-. ..+++.|+|...... .+.+ .|+|...+...+. ... ..+..
T Consensus 195 ~P~~P~~~~~~~~-~~~~~~l~w~~p~~~-~g~pi~~y~v~~~~~~~~~~~------~~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKIIEL-SQTTAKVSFNKPDSH-GGVPIHHYQVDVKEVASEIWK------IVR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEEEEE-CSSCEEEEEECCSCC-TTSCEEEEEEEEEETTCSCCE------EEE---------------CSTTC
T ss_pred CCCCCcceEEeec-cCCEEEEEEeCCCCC-CCcceEEEEEEEEECCCcccE------Eee---------------ccCCc
Confidence 3456655554322 357899999854321 1223 4555544332221 000 11223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...+|++|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998765455556777888988654
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.27 E-value=1.1 Score=43.99 Aligned_cols=92 Identities=18% Similarity=0.248 Sum_probs=55.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
-|.+|.-+++.... .+.+.|+|........-.-.|+|....+..+... .. .......
T Consensus 136 kP~PP~nl~v~~~~-~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~----~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEESS-SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE----EE------------------CSSCEEE
T ss_pred EeCCCCeEEEEECC-CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE----ec------------------CCceEEE
Confidence 47788877776543 4799999998742111123577765443333210 00 0113556
Q ss_pred ecCCCCCCEEEEEEeeecCCC---Cc---cccceEEEEcCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNS---TY---IWSSEYQFKASP 286 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg---~~---~~S~~~~F~T~p 286 (619)
|.+|+|+++|..||......+ .+ .||+...|.|.+
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~ 233 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNT 233 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC--
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCC
Confidence 799999999999999875321 22 466677787754
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=89.21 E-value=0.95 Score=42.61 Aligned_cols=91 Identities=20% Similarity=0.267 Sum_probs=53.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
-|.+|.-+++.... .+.+.|+|........-.-.|+|....+..+... .. .......
T Consensus 98 kP~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~----~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEEE----ec------------------cCceEEE
Confidence 47788877766543 3799999998742111234678876544333210 00 0124556
Q ss_pred ecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcC
Q 007069 252 LKELWPNAMYTYKVGHRLFN---STY---IWSSEYQFKAS 285 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~d---g~~---~~S~~~~F~T~ 285 (619)
|.+|+|+++|..||...... ..+ .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 79999999999999987532 122 45555666653
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=89.15 E-value=8.1 Score=40.44 Aligned_cols=106 Identities=21% Similarity=0.280 Sum_probs=59.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--------CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccC
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 243 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 243 (619)
-|.+|..+.+.... +.+.|+|..+..... -.-.|+|...+ ..+... . +.. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~-~--~~~---------------~ 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDA-A--ILL---------------S 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTC-E--EEE---------------E
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhe-e--eec---------------c
Confidence 57788888776644 599999998754210 01355565543 222111 1 100 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcCCCCCCCCceEEEEE
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFN---STY---IWSSEYQFKASPYPGQNSLQRVVIF 299 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~d---g~~---~~S~~~~F~T~p~~g~~~~~rf~v~ 299 (619)
....+...+.+|.|+++|..||...... +.+ .||+...|+|++.. ...+..+-.+
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~ 227 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECF 227 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEE
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEE
Confidence 1123333344999999999999876421 222 45678899998754 2233344444
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=88.75 E-value=0.39 Score=40.23 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=37.8
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEE
Q 007069 186 TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKV 265 (619)
Q Consensus 186 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrv 265 (619)
+.++++|+|..... .-..-.|+|....+... ..... -+|-.-.++|+||+|||+|.-+|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~-----------------v~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLD-----------------LPSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEE-----------------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEE-----------------CCCCccEEEECCCCCCCEEEEEE
Confidence 37899999987642 11234566665433110 00011 12344668899999999999888
Q ss_pred eee
Q 007069 266 GHR 268 (619)
Q Consensus 266 g~~ 268 (619)
..-
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.57 E-value=1.1 Score=48.54 Aligned_cols=143 Identities=10% Similarity=0.159 Sum_probs=77.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----------hcCCCCEEEEcCcccccCCc------------
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----------DLKNIDIVFHIGDICYANGY------------ 349 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~----------~~~~pDfVl~~GDi~y~~g~------------ 349 (619)
...++++++|++.+... .. ....++.+...+. ...++.-+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~----~~--~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGG----GE--SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSC----HH--HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCc----cc--chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 34689999999998531 00 0112223322221 13568999999999965321
Q ss_pred -------hhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccce---eeeccCCCCCceEEEEE
Q 007069 350 -------ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAET---MFYVPAENRAKFWYSTD 419 (619)
Q Consensus 350 -------~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~---~f~~P~~~~~~~~Ysfd 419 (619)
..+.+++-+.+..+...+|+.+.|||||-.... . ....-.+|-.+-.. .+.. -.|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~----l-PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYT----L-PQQPLHPCMFPLATAYSTLQL----VTNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSS----S-SCCCCCTTSCHHHHTSTTEEE----CCSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccccc----C-CCCCcCHHHhhhhhhcCccEE----eCCC-eEEE
Confidence 123344445566677899999999999964210 0 00000111111000 1111 1222 5699
Q ss_pred eCCEEEEEEeCCC--C---CCCCHHHHHHHHHHHhh
Q 007069 420 YGMFRFCVADTEH--D---WREGTEQYKFIEHCLAS 450 (619)
Q Consensus 420 ~G~v~fi~Ldt~~--~---~~~~~~Q~~WL~~~L~~ 450 (619)
+++++|++..... + +.+...-++.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999999875431 0 12233456788888874
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=87.87 E-value=0.93 Score=43.09 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=49.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC-C----CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCe
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI-N----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 246 (619)
-|.+|.-+.+.... .+...|+|...... . .-.-.|+|...+.... . ...... ..+.
T Consensus 97 kp~PP~nl~~~~~~-~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~----~~~~~~-------------~~~~ 157 (207)
T 1iar_B 97 KPRAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-F----RIYNVT-------------YLEP 157 (207)
T ss_dssp CCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-E----EEEEEC-------------SSCC
T ss_pred ccCCCCCeEEEEcc-CCCEEEEECCCCCccccccccEEEEEEEccCCCchh-h----eeeeee-------------cCCc
Confidence 57788877776433 46899999987431 0 1124566765433211 0 011000 1234
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p~ 287 (619)
.....+.+|.||++|.-||.....+..+ .||+...|+|.+.
T Consensus 158 ~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 158 SLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp EEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred EEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 5556678999999999999987432222 5677789998754
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=86.62 E-value=5.7 Score=41.56 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.0
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~T~p 286 (619)
...+|++|.|++.|..+|.... ..|.+.+|+...++|..
T Consensus 163 ~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 163 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp SEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred cEEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 3577999999999999998754 13455678888888864
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.39 E-value=3.4 Score=39.74 Aligned_cols=35 Identities=3% Similarity=-0.068 Sum_probs=25.2
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
+++|.|++.|.|||.....-|.+.+|++..+.+++
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 56899999999999876545555677766666544
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.01 E-value=5.2 Score=40.20 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.1
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~T~p 286 (619)
...+|++|+|+|.|..+|.... ..|.+.+|+...++|..
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 3578999999999999997643 23455678888888854
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.58 E-value=6.3 Score=44.42 Aligned_cols=42 Identities=12% Similarity=0.039 Sum_probs=31.7
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 245 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 245 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
+-....+|+||+|+|+|.++|......|.+.+ ....|+|++.
T Consensus 591 ~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~ 632 (680)
T 1zlg_A 591 SDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPEL 632 (680)
T ss_pred CcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCC
Confidence 44678899999999999999986544454444 6678988754
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=83.81 E-value=4.4 Score=44.60 Aligned_cols=41 Identities=17% Similarity=0.035 Sum_probs=29.9
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~F~T~p~ 287 (619)
...++|++|+|+|.|.++|......|. ..++....++|.+.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 456789999999999999987633332 22466778888764
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=82.56 E-value=0.66 Score=37.34 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=27.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcC
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKAS 285 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~ 285 (619)
||-.+.-+|.||+||.+|.=++-+-...| -++ .+.|+|.
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g---~~EvtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYG---HQEVTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTS---CCCEEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecc---cCCceEEEEEec
Confidence 56666777999999999999988754322 244 4556554
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.51 E-value=2.8 Score=39.46 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=31.1
Q ss_pred EEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLF--NSTYIWSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~--dg~~~~S~~~~F~T~p~ 287 (619)
.++|++|+|+|.|..+|..... .+.+.||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986543 35567898899998763
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=81.93 E-value=4.4 Score=42.55 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCC--Cc---cccceEEEEc
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNS--TY---IWSSEYQFKA 284 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg--~~---~~S~~~~F~T 284 (619)
..+.|.+|+|||+|..||......| .+ .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 4678999999999999999765432 23 4666677765
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=81.91 E-value=0.76 Score=53.96 Aligned_cols=136 Identities=11% Similarity=0.083 Sum_probs=70.7
Q ss_pred EEEEEeeccc--ceEEEEEeCCC---C----CcE-EEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc
Q 007069 136 LKLMLINQRS--DFSVALFSGGL---L----KPK-LVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA 205 (619)
Q Consensus 136 ~~~~l~n~r~--~~~f~~f~~~~---~----~~~-~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~ 205 (619)
.++.|-+.+. .|.|.+..... . .+. +.++..+ ....|.+|..+++. ..+.+++.|+|..+.. +...
T Consensus 747 t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~-~~~~p~~P~~l~~~-~~~~~sv~LsW~~P~~--~nG~ 822 (897)
T 2dtg_E 747 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP-EAKADDIVGPVTHE-IFENNVVHLMWQEPKE--PNGL 822 (897)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC-CCCCCCCCCCCCCC-SSSSSCCCCCCCCCCS--CSSC
T ss_pred eEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccC-ccCCCCCCcceEEE-eCCCCEEEEEECCCCC--CCCC
Confidence 3556666665 57777766321 1 111 2222221 11234556555432 2246899999987642 2234
Q ss_pred EEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 206 FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 206 ~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
...|...-....... ...|.... +.+....++|++|+|| +|.+||......|.+.||+...|+|+
T Consensus 823 I~~Y~V~y~~~~~~~--------~~~~~~~~------~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~ 887 (897)
T 2dtg_E 823 IVLYEVSYRRYGDEE--------LHLCDTRK------HFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVT 887 (897)
T ss_dssp EEEECCCCBSSSBCC--------CCCCCCSS------SCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEEEEEECCCcc--------eEEEEeee------eecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeC
Confidence 556653211000000 00011000 0111223578999999 69999987655666778999999998
Q ss_pred CCCCC
Q 007069 286 PYPGQ 290 (619)
Q Consensus 286 p~~g~ 290 (619)
+.+..
T Consensus 888 ~~p~~ 892 (897)
T 2dtg_E 888 DYLDV 892 (897)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 86543
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.25 E-value=1.5 Score=42.29 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=28.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..++++|+|++.|.|||......|...+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999876545555677777887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 619 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 5e-60 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 8e-25 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 4e-17 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 5e-17 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 4e-06 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 6e-05 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.003 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 200 bits (510), Expect = 5e-60
Identities = 69/325 (21%), Positives = 119/325 (36%), Gaps = 33/325 (10%)
Query: 288 PGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN 347
G + + GD+G+ + S T K V +GD+ YA+
Sbjct: 2 TGLDVPYTFGLIGDLGQS------------FDSNTTLSHYELSPKKGQTVLFVGDLSYAD 49
Query: 348 GYIS----QWDQFTAQIEPIASTVPYMIASGNHERDW-PGTGSFYGNKDSGGECGVLAET 402
Y + +WD + E + P++ +GNHE ++ P K
Sbjct: 50 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRY-----H 104
Query: 403 MFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFL 462
+ Y +++ + FWYS V + + GT QY +++ L V R + PWLI L
Sbjct: 105 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVL 164
Query: 463 AHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICT 522
H L Y+S R + + KYKVD+ GHVH YER+ +
Sbjct: 165 MHSPL-YNSY----NHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYK 219
Query: 523 NKE-KNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSN 578
+ +++ G G + Q +S +R+ +G + ++
Sbjct: 220 ITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTH 279
Query: 579 LLFEYKKSSDGKVY--DSFRISRDY 601
F + ++ DG DS +
Sbjct: 280 AHFSWNRNQDGVAVEADSVWFFNRH 304
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 102 bits (255), Expect = 8e-25
Identities = 53/320 (16%), Positives = 88/320 (27%), Gaps = 40/320 (12%)
Query: 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD 354
R V GD G + + + A+ ++ L D + +GD Y G D
Sbjct: 6 RFVAVGDWG--GVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKD 62
Query: 355 -QFTAQIE-----PIASTVPYMIASGNHERDW-PGTGSFYGNKDSGGECGVLAETM-FYV 406
+F E P VP+ + +GNH+ Y + F +
Sbjct: 63 KRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKI 122
Query: 407 PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRV 466
P N + + D D E LA + +Q V
Sbjct: 123 PRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYV 179
Query: 467 LGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEK 526
L +++ + L L +KV + GH HN +
Sbjct: 180 LVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDE---------- 229
Query: 527 NYYKGTLNGTIHVVAGGGGAGLAEFTPLQTT-------WSLYRDYDYGFVKLTAFDHSNL 579
NG V++G G L+ + GF + +
Sbjct: 230 -------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE-ITPKEM 281
Query: 580 LFEYKKSSDGKVYDSFRISR 599
Y + GK ++ R
Sbjct: 282 SVTY-IEASGKSLFKTKLPR 300
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 75.3 bits (185), Expect = 4e-17
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 22/122 (18%)
Query: 169 AFTNP---NAPVYPRLAQG-KTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTL 224
F P NAP + QG M ++W + + V++ + R G +
Sbjct: 9 VFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP--GSSAVRYWSEKNGRKRIAKGKM 66
Query: 225 TFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284
+ G+IH + +++L N Y Y+VG + + F
Sbjct: 67 S----------TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVG------LRNTTRRFSFIT 110
Query: 285 SP 286
P
Sbjct: 111 PP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 75.0 bits (184), Expect = 5e-17
Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 18/116 (15%)
Query: 172 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGS 230
NAP + QG + ++WT+ Y V + + GT+
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYD-KAGANKVFYWSENSKSQKRAMGTVV----- 74
Query: 231 MCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286
+IH +K+L + Y Y++G ++ F P
Sbjct: 75 -----TYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGD------AKRQFWFVTPP 119
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 46.7 bits (109), Expect = 4e-06
Identities = 31/227 (13%), Positives = 56/227 (24%), Gaps = 20/227 (8%)
Query: 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ 355
VV GD+ DG N D +L+T + Y S
Sbjct: 53 VVQLGDI----IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSS 108
Query: 356 FTAQIEPIASTVPYMIASGNHER----DWPGTGSFYGNKDSGGECG------VLAETMFY 405
+ + + + P + G +
Sbjct: 109 RLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRI 168
Query: 406 VPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHR 465
+ N + + + +Q ++++ L D +++ LIF
Sbjct: 169 LTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLP 228
Query: 466 VLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512
V ++ D L L V I GH H+ R
Sbjct: 229 VHPCAA------DPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGR 269
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 43.9 bits (102), Expect = 2e-05
Identities = 20/193 (10%), Positives = 42/193 (21%), Gaps = 21/193 (10%)
Query: 319 ASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNH 376
L + ++ D + IG++ + F + Y+ G
Sbjct: 16 GDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVP--GPQ 73
Query: 377 ER-DWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWR 435
+ W + E + ET + +
Sbjct: 74 DAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEP------EEHE 127
Query: 436 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQ 495
E+ L ++ K IFL H G + L +
Sbjct: 128 ALRYPAWVAEYRLKALWELKDYPKIFLFH----------TMPYHKGLNEQGSHEVAHLIK 177
Query: 496 KYKVDIAIYGHVH 508
+ + +
Sbjct: 178 THNPLLVLVAGKG 190
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 42.8 bits (99), Expect = 6e-05
Identities = 26/209 (12%), Positives = 49/209 (23%), Gaps = 19/209 (9%)
Query: 305 DEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIA 364
+ + D A+ + QL + D V GDI G ++ + +
Sbjct: 13 SRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSLN 71
Query: 365 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFR 424
P + GNH+ + + + + D R
Sbjct: 72 --YPLYLIPGNHDDKALFLEYL--------------QPLCPQLGSDANNMRCAVDDFATR 115
Query: 425 FCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEP 484
D+ L + + + G A
Sbjct: 116 LLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQ--MDPIACE 173
Query: 485 MGRESLQKLWQKYKVDIAIYGHVHNYERT 513
G L + + + GH H+ T
Sbjct: 174 NGHRLLALVERFPSLTRIFCGHNHSLTMT 202
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/213 (11%), Positives = 57/213 (26%), Gaps = 26/213 (12%)
Query: 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ 355
+V+ G++ EY A R++I + ++ I D+
Sbjct: 33 LVVVGNIL-KNEALEKEYERAHLARREPNRKVIHENEHYIIETL--------------DK 77
Query: 356 FTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFW 415
F +I + V + G ++ F + A R +F
Sbjct: 78 FFREIGEL--GVKTFVVPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFE 132
Query: 416 YSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFY 475
G+ + + + ++I + + ++ + + +
Sbjct: 133 VIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRL---VTIFYTPP--IGEFVD 187
Query: 476 AVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 508
+ ++AI GHV
Sbjct: 188 RTPEDPKHHGSAVVNTIIK-SLNPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 619 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.98 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.84 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.81 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.78 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.57 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.55 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.11 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.07 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.01 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.93 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.77 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.73 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.43 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.09 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.99 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.6 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.56 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.48 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.47 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.35 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.35 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.33 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.31 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.31 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.3 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.29 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.28 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.27 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 97.23 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.21 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 97.2 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.2 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.2 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.15 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.1 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.05 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 97.04 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.99 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.98 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.91 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.9 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.79 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.78 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.78 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.75 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.69 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.68 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.67 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.62 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.62 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.58 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.57 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.57 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.55 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.55 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.52 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.47 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.45 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.44 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.41 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.4 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.4 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.37 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.35 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.33 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.24 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.19 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.12 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.11 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.06 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.05 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.04 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.04 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.02 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.0 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.97 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.94 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.94 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.94 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.93 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.92 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.92 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 95.86 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.85 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.81 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.74 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.73 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.69 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.67 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.61 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.41 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.36 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 95.33 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.1 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 95.07 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.03 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.03 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.69 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 92.8 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 92.79 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.7 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.55 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 91.52 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 89.56 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 89.38 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 89.07 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 88.5 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 85.46 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 83.38 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 81.39 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=7.8e-55 Score=453.92 Aligned_cols=289 Identities=25% Similarity=0.395 Sum_probs=238.6
Q ss_pred CCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCc----hhHHHHHHHhhhhhh
Q 007069 289 GQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIA 364 (619)
Q Consensus 289 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i~~l~ 364 (619)
|++.++||+++||+|... .+..++..+.....+||||||+||++|+++. ..+||+|++.++++.
T Consensus 3 g~~~p~~F~v~GD~g~~~------------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~ 70 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSF------------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 70 (312)
T ss_dssp CSSCCEEEEEECSCCSBH------------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCC------------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHh
Confidence 456789999999998642 2344555655555789999999999997653 568999999999999
Q ss_pred cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHH
Q 007069 365 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQY 441 (619)
Q Consensus 365 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~ 441 (619)
+.+|+|+++||||+++... ....++..++..+|.||.+ ...+.||+|++|++|||+||++..+..+++|+
T Consensus 71 ~~~P~~~~~GNHD~~~~~~-------~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~ 143 (312)
T d2qfra2 71 AYQPWIWTAGNHEIEFAPE-------INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQY 143 (312)
T ss_dssp TTSCEEECCCGGGTCCBGG-------GTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHH
T ss_pred hcceEEEeccccccccccc-------ccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHH
Confidence 9999999999999864221 1123455677888999964 34577999999999999999998888899999
Q ss_pred HHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeecccccee
Q 007069 442 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC 521 (619)
Q Consensus 442 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~ 521 (619)
+||+++|++++|+++||+||++|+|+ |++......+ .+.+ |+.|++||++|+||++|+||+|.|||++|++++++
T Consensus 144 ~WL~~~L~~~~~~~~~w~iv~~H~P~-y~~~~~~~~~---~~~~-r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~ 218 (312)
T d2qfra2 144 TWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFME---GEAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 218 (312)
T ss_dssp HHHHHHHHTCCTTTCCEEEEECSSCS-SCCBSTTTTT---THHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCC
T ss_pred HHHHHHHHHHhhcCCCEEEEEccccc-cccCCCCccc---chhH-HHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcc
Confidence 99999999998899999999999999 8875432211 2344 89999999999999999999999999999999887
Q ss_pred ccC-CCccccCCCCceEEEEeCCCCCC---CCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEE--EEE
Q 007069 522 TNK-EKNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVY--DSF 595 (619)
Q Consensus 522 ~~~-~~~~y~~~~~g~vyiv~G~gG~~---l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~--D~f 595 (619)
... .......+++||||||+|+||+. ...+..++|.|+++|+.+|||.+|+++|+|+|.+||+++.||+++ |+|
T Consensus 219 ~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~ 298 (312)
T d2qfra2 219 KITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 298 (312)
T ss_dssp CSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEE
T ss_pred cccCCccccccCCCcCEEEEECcCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEE
Confidence 543 23333346789999999999953 345666788999999999999999999999999999999999987 999
Q ss_pred EEEeCC
Q 007069 596 RISRDY 601 (619)
Q Consensus 596 ~i~k~~ 601 (619)
||.|++
T Consensus 299 ~i~~~~ 304 (312)
T d2qfra2 299 WFFNRH 304 (312)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999986
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.98 E-value=9.2e-33 Score=281.44 Aligned_cols=258 Identities=19% Similarity=0.250 Sum_probs=174.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHH---HHHHHHHhcCCCCEEEEcCcccccCCch----hHHHHHHHhh--hhh
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLN---TTRQLIQDLKNIDIVFHIGDICYANGYI----SQWDQFTAQI--EPI 363 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~---~~~~i~~~~~~pDfVl~~GDi~y~~g~~----~~wd~f~~~i--~~l 363 (619)
.+||+++||+|........ ...... .+.+.+++ .+|||||++||++|..|.. .+|.++++.+ ...
T Consensus 4 ~~~F~vigD~g~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~ 77 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFH-----TAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 77 (302)
T ss_dssp CEEEEEECSCCCCSSTTSS-----CHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CeEEEEEecCCCCCCcccc-----cHHHHHHHHHHHHHHhh-CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhh
Confidence 4999999999866432211 111122 22333332 5899999999999987643 3454444333 224
Q ss_pred hcCCCeEEccCCCccCCCCCC-CCCCCCCCCCccccccceeeeccCCCCCceEEEEEe------CCEEEEEEeCCCC---
Q 007069 364 ASTVPYMIASGNHERDWPGTG-SFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY------GMFRFCVADTEHD--- 433 (619)
Q Consensus 364 ~~~vP~~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~--- 433 (619)
...+|+|+++||||+...... ..+ .....++.+|. .||++.+ ++++|+++|+...
T Consensus 78 ~~~~P~~~~~GNHD~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ldt~~~~~~ 142 (302)
T d1utea_ 78 LRNVPWHVLAGNHDHLGNVSAQIAY----------SKISKRWNFPS-----PYYRLRFKIPRSNVSVAIFMLDTVTLCGN 142 (302)
T ss_dssp GTTCCEEECCCHHHHHSCHHHHHHG----------GGTSTTEECCS-----SSEEEEEECTTSSCEEEEEECCHHHHHCC
T ss_pred hcCCceEEeecccccccccccccch----------hhccccccCCC-----cccceeecccCCCCcEEEEEccceeEeec
Confidence 568999999999997532110 000 11122344442 2466654 4699999997421
Q ss_pred --------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCC
Q 007069 434 --------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKV 499 (619)
Q Consensus 434 --------------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~V 499 (619)
...+.+|++||+++|++ ++.+|+|++.|+|+ |+...+ +. .... ++.|++||++++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~-~~~~~~----~~-~~~~-~~~~~~ll~~~~v 212 (302)
T d1utea_ 143 SDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPV-WSIAEH----GP-THCL-VKQLLPLLTTHKV 212 (302)
T ss_dssp GGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCS-SCCSSS----CC-CHHH-HHHTHHHHHHTTC
T ss_pred ccccccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccc-cccCCC----CC-chhh-hhhhhHHHHhcCc
Confidence 01247899999999998 46789999999999 776432 11 1233 8899999999999
Q ss_pred eEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCC------CCCCcc-eeeeCcccEEEEE
Q 007069 500 DIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP------LQTTWS-LYRDYDYGFVKLT 572 (619)
Q Consensus 500 dlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~------~~~~ws-~~~~~~~Gy~~l~ 572 (619)
+++|+||+|.|+|+.+ .+++.|+++|+||........ ..+.|. ......+||.+++
T Consensus 213 ~~~~~GH~H~~~r~~~-----------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~ 275 (302)
T d1utea_ 213 TAYLCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE 275 (302)
T ss_dssp SEEEECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEE
T ss_pred eEEEeCCCcceEEEec-----------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEE
Confidence 9999999999999863 367899999988865322111 111121 1224578999999
Q ss_pred EecCCeEEEEEEECCCCcEEEEEEEEeC
Q 007069 573 AFDHSNLLFEYKKSSDGKVYDSFRISRD 600 (619)
Q Consensus 573 v~n~~~l~~~~~~~~dG~v~D~f~i~k~ 600 (619)
| +.++|+++|+ +.+|+++|+++|.|.
T Consensus 276 v-~~~~l~~~~~-~~~G~~~~~~~~~~~ 301 (302)
T d1utea_ 276 I-TPKEMSVTYI-EASGKSLFKTKLPRR 301 (302)
T ss_dssp E-CSSCEEEEEE-ETTSCEEEEEEECCC
T ss_pred E-ECCEEEEEEE-eCCCCEEEEEEecCC
Confidence 9 7899999998 689999999999874
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=4.4e-22 Score=198.79 Aligned_cols=244 Identities=17% Similarity=0.122 Sum_probs=143.9
Q ss_pred ceEEEEEeecCCCCCCCCCccccccc-c-hHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc--CCC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQY-A-SLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVP 368 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~-~-s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~--~vP 368 (619)
.+||++++|+|...... ..+..... . ....++.+.+...+|||||++||++. .|...+|+.+.+.++++.. .+|
T Consensus 4 ~~~i~~iSD~Hl~~~~~-~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~-~g~~~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDR-RLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp SEEEEEECCCCBC-----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS-SCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEEeeCccCCCCc-ccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCChhHHHHHHHHhhhhhhhcCCC
Confidence 59999999999854321 11211111 1 11233444333468999999999994 5667778888887776543 689
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCC----CCHHHHHHH
Q 007069 369 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWR----EGTEQYKFI 444 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~----~~~~Q~~WL 444 (619)
++.++||||.... + ...+..........+|+++.++++|++|||..... ...+|++||
T Consensus 82 ~~~v~GNHD~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl 143 (256)
T d2hy1a1 82 LVWVMGNHDDRAE-----L-------------RKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWL 143 (256)
T ss_dssp EEECCCTTSCHHH-----H-------------HHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHH
T ss_pred EEEEcccccchhh-----h-------------hhhhccccccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHH
Confidence 9999999994310 0 00010011112334578999999999999875432 357899999
Q ss_pred HHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccC
Q 007069 445 EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK 524 (619)
Q Consensus 445 ~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~ 524 (619)
++.|++. +..++||++|+|+ +............ . .++.+..++++++|+++|+||.|...+..
T Consensus 144 ~~~L~~~---~~~~~iv~~Hhpp-~~~~~~~~~~~~~--~-~~~~~~~i~~~~~v~~~~~GH~H~~~~~~---------- 206 (256)
T d2hy1a1 144 AEELATP---APDGTILALHHPP-IPSVLDMAVTVEL--R-DQAALGRVLRGTDVRAILAGHLHYSTNAT---------- 206 (256)
T ss_dssp HHHHTSC---CTTCEEEECSSCS-SCCSSHHHHTTSB--C-CHHHHHHHHTTSSEEEEEECSSSSCEEEE----------
T ss_pred HHHHHhh---hccCceeeeecCC-ccccccccccccc--c-cHHHHHHHHhccCceEEEccccchhhceE----------
Confidence 9999874 3344788899998 6553221111111 1 26788999999999999999999765432
Q ss_pred CCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEE
Q 007069 525 EKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 584 (619)
Q Consensus 525 ~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 584 (619)
.+|+.++++|+.... .++. ..+.-........||..+++ .++.+.++++
T Consensus 207 --------~~gi~~~~~~s~~~~-~~~~-~~~~~~~~~~~~~g~~lv~v-~~d~~~~~~i 255 (256)
T d2hy1a1 207 --------FVGIPVSVASATCYT-QDLT-VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVI 255 (256)
T ss_dssp --------ETTEEEEECCCCC---------------------CEEEEEE-CSSCEEEEEE
T ss_pred --------ECCEEEEEcCCcccc-cccc-CCCCCcccccCCCCEEEEEE-ECCCEEEEeC
Confidence 246677776653221 1111 01111122345678999988 4555555543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.84 E-value=6e-20 Score=185.09 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=123.3
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDF--QYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~--~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
.+|+.++|+|...... ..+... .....++++.+.+..++||+|+++||+++ .+...+|+.+.+.++++ .+|+++
T Consensus 1 M~i~hiSD~Hl~~~~~-~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~-~~~~~~y~~~~~~l~~l--~~p~~~ 76 (271)
T d3d03a1 1 MLLAHISDTHFRSRGE-KLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPLYL 76 (271)
T ss_dssp CEEEEECCCCBCSTTC-CBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCEEE
T ss_pred CEEEEEecCcCCCCcc-ccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc-CCcchhHHHHHHHHhcc--CCCEEE
Confidence 4899999999865421 111111 11111233333322358999999999995 55667777777777765 689999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHHH
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFIEHC 447 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL~~~ 447 (619)
++||||...... .++ ...+...........|.++.++++||+|||.... ....+|++||+++
T Consensus 77 i~GNHD~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 77 IPGNHDDKALFL-EYL-------------QPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp ECCTTSCHHHHH-HHH-------------GGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EecCccchHHHH-HHh-------------hhhhhccccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 999999641100 000 0000000111223457788899999999997543 2368999999999
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceee
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERT 513 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt 513 (619)
|++. ++.+ +|+++|||+ +........... .. ..++|.++++++ +|+++|+||.|.....
T Consensus 143 L~~~--~~~~-~iv~~Hh~p-~~~~~~~~d~~~--~~-~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 143 LFEG--GDKP-ATIFMHHPP-LPLGNAQMDPIA--CE-NGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHH--TTSC-EEEEESSCS-SCCSCTTTGGGS--BT-TTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred Hhhh--ccce-eEEEeccCc-cccCcccccccc--cc-chHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 9985 3445 677778877 554321111111 11 156899999998 6999999999986554
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=4.7e-20 Score=185.45 Aligned_cols=248 Identities=15% Similarity=0.153 Sum_probs=148.0
Q ss_pred ceEEEEEeecCCCCCCCCCc----ccccccchHHHHHHHHHh--cCCCCEEEEcCcccccC-----CchhHHHHHHHhhh
Q 007069 293 LQRVVIFGDMGKDEADGSNE----YNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYAN-----GYISQWDQFTAQIE 361 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~----~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~-----g~~~~wd~f~~~i~ 361 (619)
.|||++++|+|.+..+.... ..+....+...++++++. ..+|||||++||+++.. .....|+.+.+.++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 49999999999864321111 111112334555555543 37899999999999542 12233444444444
Q ss_pred hhhcCCCeEEccCCCccCCCCCCC-CCCCCCCCCcccccc-ceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC------
Q 007069 362 PIASTVPYMIASGNHERDWPGTGS-FYGNKDSGGECGVLA-ETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------ 433 (619)
Q Consensus 362 ~l~~~vP~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~-~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------ 433 (619)
.+ .+|++.++||||........ ............... ...+ .......+.+..++++|+.+++...
T Consensus 83 ~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
T d2nxfa1 83 AC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLI----GDDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 156 (320)
T ss_dssp TT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECG----GGTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hc--CCCEEEecccCccccccchhcccccccchhhhccccccccc----CCCCccceeecCCCeEEEEecCccccccccc
Confidence 32 78999999999974221100 000000000000000 0001 1123345677899999999987521
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCc
Q 007069 434 ----------------------------------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI 473 (619)
Q Consensus 434 ----------------------------------------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~ 473 (619)
...+.+|++||+++|+++.+ +..++|+++|+|+ +....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~-~~~~~ 234 (320)
T d2nxfa1 157 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPV-HPCAA 234 (320)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCC-CTTSS
T ss_pred ccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCC-ccCCC
Confidence 01257899999999988653 3356899999998 55432
Q ss_pred cccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC
Q 007069 474 FYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT 552 (619)
Q Consensus 474 ~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 552 (619)
... . .....++|..+|.+| +|+++|+||.|.+++.. ..+|..||+.|+....
T Consensus 235 ~~~--~---~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-----------------~~~g~~~i~~~~~~~~----- 287 (320)
T d2nxfa1 235 DPI--C---LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-----------------DSSGAQHITLEGVIET----- 287 (320)
T ss_dssp CGG--G---SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-----------------CTTSCEEEECCCGGGC-----
T ss_pred CCc--c---chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-----------------ccCCCEEEECCeeecC-----
Confidence 111 1 111267899999998 59999999999887643 2357788887653211
Q ss_pred CCCCCcceeeeCcccEEEEEEecCCeEEEEEEE
Q 007069 553 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 585 (619)
Q Consensus 553 ~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 585 (619)
.....+|..+++ .+++|.++-+.
T Consensus 288 ---------~~~~~~~~~~~v-~~d~~~~~~~~ 310 (320)
T d2nxfa1 288 ---------PPHSHAFATAYL-YEDRMVMKGRG 310 (320)
T ss_dssp ---------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred ---------CCCCCCEEEEEE-ECCEEEEEEec
Confidence 123458888998 56788887654
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.81 E-value=4.5e-20 Score=161.36 Aligned_cols=99 Identities=25% Similarity=0.444 Sum_probs=78.0
Q ss_pred cccCC---CCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcce-EEecCCcCCCCCccccccC
Q 007069 169 AFTNP---NAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTL-TFDRGSMCGAPARTVGWRD 243 (619)
Q Consensus 169 ~~~~~---~~P~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~-t~~~~~mc~~pa~~~g~~~ 243 (619)
.|.+| ++|+||||+++++ .++|+|+|+|... ...+.|+||.+++.....+.+.. +| +.++.+
T Consensus 9 ~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~--~~~~~V~yg~~~~~~~~~a~~~~~~~-----------~~~~~~ 75 (112)
T d2qfra1 9 VFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTY-----------RFFNYS 75 (112)
T ss_dssp GGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCEEEEEESSSCCCEEEECEEECC-----------BCSSCB
T ss_pred cccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCC--CCCcEEEEEECCCCCCcEEEEEEEEE-----------EecccC
Confidence 36666 7899999999986 6999999999754 46799999998776544333222 22 123456
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
.+++|+|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 76 ~~~~h~v~Lt~L~P~T~Y~YrVG~~------~~S~~~~F~T~P 112 (112)
T d2qfra1 76 SGFIHHTTIRKLKYNTKYYYEVGLR------NTTRRFSFITPP 112 (112)
T ss_dssp CCEEEEEEECSCCTTCEEEEEECCS------SSCEEEEEECCC
T ss_pred CcEEEEEEECCCCCCCEEEEEECCC------CceeeEEEEcCC
Confidence 7899999999999999999999862 489999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.78 E-value=3.2e-19 Score=157.56 Aligned_cols=97 Identities=20% Similarity=0.338 Sum_probs=76.2
Q ss_pred CCCCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccC-cceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPA-GTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~-~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
+.++|+|+||+++++ .++|+|+|+|..+. .+.+.|+||..++.....+. .+.+|.... ...+|+|+
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~-~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~-----------~~~~~~H~ 88 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK-AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIHH 88 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC-TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCCC-CCCCEEEEcCCCCCCccEEEEEEEEeeccc-----------ccCCeEEE
Confidence 347999999999986 79999999996542 35689999998776554433 333343222 24689999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 89 v~LtgL~P~T~Y~YrVG~~------~~S~~~~F~T~P 119 (119)
T d1xzwa1 89 CTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPP 119 (119)
T ss_dssp EEECCCCTTCEEEEEECCG------GGCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEeCCC
Confidence 9999999999999999863 489999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.57 E-value=5.7e-15 Score=142.10 Aligned_cols=175 Identities=13% Similarity=0.110 Sum_probs=108.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
-+|+++||.|.+ ++.++++++.. .++|+|+++||++.......++..+++.+..+ .+|+++
T Consensus 6 ~~i~~~sd~hg~---------------~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~ 68 (228)
T d1uf3a_ 6 RYILATSNPMGD---------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred cEEEEEeCCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEE
Confidence 468899999854 34455554432 57999999999996555555666666666554 789999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC----------CCCCHHHH
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD----------WREGTEQY 441 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~~~~~Q~ 441 (619)
++||||...... +. .........+........+.+..+++.++.++.... .....+|.
T Consensus 69 i~GNHD~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (228)
T d1uf3a_ 69 VPGPQDAPIWEY---LR---------EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVA 136 (228)
T ss_dssp ECCTTSCSHHHH---HH---------HHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHH
T ss_pred EecCCCchhhhh---hh---------hhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHH
Confidence 999999631100 00 000000000000000111446667788877764321 11246789
Q ss_pred HHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007069 442 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 510 (619)
Q Consensus 442 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Y 510 (619)
+|+++.++.. ...+.|+++|+|+ +..... ..+.+.+..++++++++++++||+|..
T Consensus 137 ~~l~~~l~~~---~~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 137 EYRLKALWEL---KDYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp HHHHGGGGGS---CSCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSSCE
T ss_pred HHHHHHHhhc---cCCceEEEEeeec-cCcccc---------ccccHHHHHHHHhcCCcEEEEcccccc
Confidence 9999988874 3334788999998 544221 111346788899999999999999974
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.55 E-value=1.5e-14 Score=141.32 Aligned_cols=187 Identities=13% Similarity=0.099 Sum_probs=101.5
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHH-----------------
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ----------------- 355 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~----------------- 355 (619)
+.||++++|.|... ..++.+..++++ .+||+||++||+++......+|..
T Consensus 2 ~~ri~~isD~h~~~------------~~l~~l~~~~~~-~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (257)
T d2yvta1 2 PRKVLAIKNFKERF------------DLLPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 68 (257)
T ss_dssp CCEEEEEECCTTCG------------GGHHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred CcEEEEEeCCCCCH------------HHHHHHHHHHhh-cCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeecccc
Confidence 37999999999542 224444444444 689999999999964322222221
Q ss_pred ------HHHhhhhhh-cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEE
Q 007069 356 ------FTAQIEPIA-STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVA 428 (619)
Q Consensus 356 ------f~~~i~~l~-~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~L 428 (619)
+...++.+. ..+|++.++||||...... .. ..+......+........+.+..+++.|+.+
T Consensus 69 n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (257)
T d2yvta1 69 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIF--LR----------AAYEAETAYPNIRVLHEGFAGWRGEFEVIGF 136 (257)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHH--HH----------HHHHTTTTCTTEEECSSEEEEETTTEEEEEE
T ss_pred ccchhhHHHHHHHHHhcCCcEEEEeCCCcchhhHH--HH----------HhccccccccccccccceeEEecCCeEEEEe
Confidence 111122222 2689999999999531100 00 0000000000000011123344566777776
Q ss_pred eCCCCC-------C--CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCC
Q 007069 429 DTEHDW-------R--EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKV 499 (619)
Q Consensus 429 dt~~~~-------~--~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~V 499 (619)
++.... . ....+..|++..++. .+....|+++|+|+ +.+........ ....+.+.+..+++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp-~~~~~~~~~~~--~~~~g~~~l~~~l~~~~~ 210 (257)
T d2yvta1 137 GGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPP-IGEFVDRTPED--PKHHGSAVVNTIIKSLNP 210 (257)
T ss_dssp CSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCC-SCSSTTCBTTB--SCCCSCHHHHHHHHHHCC
T ss_pred ccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEcccc-ccccccccccc--hhhhhhHHHHHhhhhcCC
Confidence 543211 1 123344555555554 34455899999998 65432111111 112235689999999999
Q ss_pred eEEEecCcccc
Q 007069 500 DIAIYGHVHNY 510 (619)
Q Consensus 500 dlvl~GH~H~Y 510 (619)
+++++||.|..
T Consensus 211 ~~~~~GHiH~~ 221 (257)
T d2yvta1 211 EVAIVGHVGKG 221 (257)
T ss_dssp SEEEECSSCCE
T ss_pred cEEEEEeecCC
Confidence 99999999974
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.11 E-value=5.7e-09 Score=98.62 Aligned_cols=186 Identities=19% Similarity=0.295 Sum_probs=108.4
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCC
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 375 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 375 (619)
++++||+|....... . ...+.++++. .++|.|+|+||++.. +..+.++.+ .-+++.+.||
T Consensus 6 IlviSD~H~~~~~~~-----l----~~~~~~~~~~-~~vD~ii~~GDi~~~--------~~l~~l~~l--~~~v~~V~GN 65 (193)
T d2a22a1 6 VLLIGDLKIPYGAKE-----L----PSNFRELLAT-DKINYVLCTGNVCSQ--------EYVEMLKNI--TKNVYIVSGD 65 (193)
T ss_dssp EEEECCCCTTTTCSS-----C----CGGGHHHHHC-TTCCEEEECSCCCCH--------HHHHHHHHH--CSCEEECCCT
T ss_pred EEEEeCCCCCcccch-----h----hHHHHHHhcc-CCCCEEEECCCCCCH--------HHHHHHHhh--CCCEEEEcCC
Confidence 899999996532110 0 1234555553 689999999999831 233444443 2368899999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007069 376 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQK 455 (619)
Q Consensus 376 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~ 455 (619)
||........ .+... +| ..-.+..++
T Consensus 66 ~D~~~~~~~~-------------~~~~~--lp------~~~~~~~~~--------------------------------- 91 (193)
T d2a22a1 66 LDSAIFNPDP-------------ESNGV--FP------EYVVVQIGE--------------------------------- 91 (193)
T ss_dssp TCCSCCBCCG-------------GGTBC--CC------SEEEEEETT---------------------------------
T ss_pred CCcchhhhhH-------------HHHhh--CC------ccEEEEECC---------------------------------
Confidence 9975321100 00000 11 112233343
Q ss_pred CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCc
Q 007069 456 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNG 535 (619)
Q Consensus 456 ~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g 535 (619)
+.|.+.|... +... . + .+.+..++.+.++|++++||+|...... .++
T Consensus 92 --~~i~l~H~~~-~~~~------~---~---~~~l~~~~~~~~~dvvi~GHTH~~~~~~------------------~~g 138 (193)
T d2a22a1 92 --FKIGLMHGNQ-VLPW------D---D---PGSLEQWQRRLDCDILVTGHTHKLRVFE------------------KNG 138 (193)
T ss_dssp --EEEEEECSTT-SSST------T---C---HHHHHHHHHHHTCSEEEECSSCCCEEEE------------------ETT
T ss_pred --EEEEEEeccC-CCCC------C---C---HHHHHHHHhhcCCCEEEEcCccCceEEE------------------ECC
Confidence 3455556433 2210 0 1 4577788889999999999999854332 256
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc-EEEEEEEE
Q 007069 536 TIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRIS 598 (619)
Q Consensus 536 ~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~ 598 (619)
+++|-.|+.|.+..... .+....|+.+++ ++..++++++.-.+|+ -++..++.
T Consensus 139 ~~~iNPGSvg~pr~~~~---------~~~~~syaild~-~~~~v~v~~y~l~~~~~~~~~~~~~ 192 (193)
T d2a22a1 139 KLFLNPGTATGAFSALT---------PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFS 192 (193)
T ss_dssp EEEEECCCSSCCCCTTS---------TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEECCCCCcCcCCCC---------CCCCCEEEEEEE-ECCEEEEEEEEecCCeEEEEEEEEe
Confidence 77788898775532111 022347999998 7889999888655554 33333433
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.07 E-value=7.3e-09 Score=97.00 Aligned_cols=180 Identities=17% Similarity=0.253 Sum_probs=108.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.|++++||+|....... . ...+.++++. .++|.|+|+||++. .+-.+.++.+ ..|++.+.
T Consensus 1 MkI~viSD~H~~~~~~~-----l----~~~~~~~~~~-~~~D~Ii~~GDi~~--------~e~l~~l~~~--~~~v~~V~ 60 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNS-----L----PAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 60 (182)
T ss_dssp CEEEEECCCCBTTTCSS-----C----CHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred CEEEEEeecCCCCcchh-----h----HHHHHHHhcc-cCCCEEEEccCccc--------hhhHHHHHhh--CCceEEEe
Confidence 48999999997542110 0 1223333332 47999999999983 1233344433 34789999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 007069 374 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDR 453 (619)
Q Consensus 374 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r 453 (619)
||||.... +|. --.++.++
T Consensus 61 GN~D~~~~------------------------~p~------~~~~~~~g------------------------------- 79 (182)
T d1z2wa1 61 GDFDENLN------------------------YPE------QKVVTVGQ------------------------------- 79 (182)
T ss_dssp CTTCCCTT------------------------SCS------EEEEEETT-------------------------------
T ss_pred CCcCcccc------------------------cce------EEEEEEcC-------------------------------
Confidence 99996421 110 01122221
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCC
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTL 533 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 533 (619)
++|.+.|.+. +... . . .+.+..++.+.++|++++||+|...-.. .
T Consensus 80 ----~~i~~~Hg~~-~~~~------~---~---~~~l~~~~~~~~~divi~GHTH~p~~~~------------------~ 124 (182)
T d1z2wa1 80 ----FKIGLIHGHQ-VIPW------G---D---MASLALLQRQFDVDILISGHTHKFEAFE------------------H 124 (182)
T ss_dssp ----EEEEEECSCC-CCBT------T---C---HHHHHHHHHHHSSSEEECCSSCCCEEEE------------------E
T ss_pred ----cEEEEEeCCC-CCCC------C---C---HHHHHHHHhccCCCEEEECCcCcceEEE------------------E
Confidence 3466667654 3221 1 1 4567778888899999999999854321 2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007069 534 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 599 (619)
Q Consensus 534 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 599 (619)
+++++|-.|+.|.+..... .+....|+.+++ ++..+++..+.-.+++ .+++++.+|
T Consensus 125 ~~~~~iNPGSv~~pr~~~~---------~~~~~syaild~-~~~~v~~~~~~l~~~~v~~~~~~~~~ 181 (182)
T d1z2wa1 125 ENKFYINPGSATGAYNALE---------TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 181 (182)
T ss_dssp TTEEEEECCCTTCCCCSSC---------SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEeCCCCCCCCCCCC---------CCCCCEEEEEEE-eCCEEEEEEEEecCCcEEEEEEEEEc
Confidence 5678888888776432111 012346889998 7888888777544555 366677666
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.01 E-value=1.8e-08 Score=93.36 Aligned_cols=161 Identities=19% Similarity=0.223 Sum_probs=103.1
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
..|+++++|+|.+ ...++++++. ..++|.|+|+||+.+..... + ..++..
T Consensus 3 ~~kI~viSD~Hgn---------------~~al~~vl~~~~~~~D~iih~GD~~~~~~~~------------~--~~~~~~ 53 (173)
T d3ck2a1 3 KQTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELRPDSP------------L--WEGIRV 53 (173)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSCTTCG------------G--GTTEEE
T ss_pred CCEEEEEeccCCC---------------HHHHHHHHHHhhcCCCEEEECCcccCcccch------------h--hcCCeE
Confidence 3799999999953 2334555543 35799999999998643221 1 237889
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
+.||||.... .| ....++.++
T Consensus 54 V~GN~D~~~~------------------------~~------~~~~~~~~~----------------------------- 74 (173)
T d3ck2a1 54 VKGNMDFYAG------------------------YP------ERLVTELGS----------------------------- 74 (173)
T ss_dssp CCCTTCCSTT------------------------CC------SEEEEEETT-----------------------------
T ss_pred EecCcccccc------------------------cc------eEEEEEECC-----------------------------
Confidence 9999996410 01 011233332
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccC
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKG 531 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~ 531 (619)
..|++.|..+ |.... . .+.+..++.+.++|++++||+|......
T Consensus 75 ------~~~~~~Hg~~-~~~~~---------~---~~~l~~~~~~~~~dvvi~GHTH~p~~~~----------------- 118 (173)
T d3ck2a1 75 ------TKIIQTHGHL-FDINF---------N---FQKLDYWAQEEEAAICLYGHLHVPSAWL----------------- 118 (173)
T ss_dssp ------EEEEEECSGG-GTTTT---------C---SHHHHHHHHHTTCSEEECCSSCCEEEEE-----------------
T ss_pred ------EEEEEEeCcC-CCCCC---------C---HHHHHHHHHhcCCCEEEeCCcCcceEEE-----------------
Confidence 2455666544 33210 0 2366777888999999999999854332
Q ss_pred CCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEE
Q 007069 532 TLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVY 592 (619)
Q Consensus 532 ~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~ 592 (619)
.++++++-.|+-|.+... .....|+.+++ ++..+.++|+ +.+++++
T Consensus 119 -~~~~~~iNPGSvg~pr~~------------~~~~syail~~-~~~~~~v~~~-~~d~~~~ 164 (173)
T d3ck2a1 119 -EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVY 164 (173)
T ss_dssp -ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBC
T ss_pred -ECCEEEEECCCCCCCCCC------------CCCCEEEEEEE-eCCEEEEEEE-EeCCeEe
Confidence 257888999998865311 11235889998 6789999998 6777643
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.93 E-value=3.9e-09 Score=102.13 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=45.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-------cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-------LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 366 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-------~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~ 366 (619)
++++++||.|.+ ...++++++. ..++|.|+++||+++. |... .+..+.+..+..+
T Consensus 1 v~I~visDiHg~---------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~-G~~~--~evi~~l~~l~~~ 62 (251)
T d1nnwa_ 1 VYVAVLANIAGN---------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGL-FPYP--KEVIEVIKDLTKK 62 (251)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS-SSCH--HHHHHHHHHHHHH
T ss_pred CEEEEEEccccC---------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC-CCCc--HHHHHHHHHHhhc
Confidence 479999999943 1223333322 2457999999999953 4322 3555666665556
Q ss_pred CCeEEccCCCccC
Q 007069 367 VPYMIASGNHERD 379 (619)
Q Consensus 367 vP~~~v~GNHD~~ 379 (619)
.++++++||||..
T Consensus 63 ~~v~~v~GNHD~~ 75 (251)
T d1nnwa_ 63 ENVKIIRGKYDQI 75 (251)
T ss_dssp SCEEEECCHHHHH
T ss_pred CCEEEEeccHHHH
Confidence 6899999999953
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.77 E-value=3.5e-08 Score=99.00 Aligned_cols=84 Identities=13% Similarity=0.198 Sum_probs=52.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC-chhHHHHHHHhhhhhhc-CCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~~-~vP~ 369 (619)
+||++++|+|.+...... ..........++++++. ..++|+||++||+++... .......+.+.++.+.. .+|+
T Consensus 1 Mkilh~SDlHlG~~~~~~--~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v 78 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK--PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPV 78 (333)
T ss_dssp CEEEEECCCCBTCCGGGC--HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCE
T ss_pred CEEEEEecCcCCCCCcCc--hhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcE
Confidence 489999999986431000 00111223455565543 268999999999995322 22333445555555543 6999
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
++++||||..
T Consensus 79 ~~i~GNHD~~ 88 (333)
T d1ii7a_ 79 FAIEGNHDRT 88 (333)
T ss_dssp EEECCTTTCC
T ss_pred EEeCCCCccc
Confidence 9999999974
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.73 E-value=7.1e-08 Score=88.31 Aligned_cols=63 Identities=17% Similarity=0.349 Sum_probs=40.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.|+++++|+|.+- ..+..+-+.++. .++|.|+++||++.. .-.+.+.. ...|++.+.
T Consensus 1 MkI~iiSDiHgn~------------~al~~vl~~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~--~~~~~~~v~ 57 (165)
T d1s3la_ 1 MKIGIMSDTHDHL------------PNIRKAIEIFND-ENVETVIHCGDFVSL--------FVIKEFEN--LNANIIATY 57 (165)
T ss_dssp CEEEEECCCTTCH------------HHHHHHHHHHHH-SCCSEEEECSCCCST--------HHHHHGGG--CSSEEEEEC
T ss_pred CEEEEEEeCCCCH------------HHHHHHHHHHHh-cCCCEEEECCCccCH--------HHHHHHhh--cCccEEEEc
Confidence 4899999999541 112222222332 689999999999831 11222222 256899999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 58 GN~D~~ 63 (165)
T d1s3la_ 58 GNNDGE 63 (165)
T ss_dssp CTTCCC
T ss_pred cccccc
Confidence 999964
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.43 E-value=5.8e-07 Score=84.12 Aligned_cols=79 Identities=18% Similarity=0.263 Sum_probs=44.9
Q ss_pred EEEEeecCCCCCCC--CCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 296 VVIFGDMGKDEADG--SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 296 f~v~GD~g~~~~~~--~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+.++||+|.+-..- ...+..+..-....+++..+...+.|.|+++||+++..+...++.+++ +.+- -..+.+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~~~~~l---~~L~--g~~~lI~ 78 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIW---KALP--GRKILVM 78 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHH---HHSS--SEEEEEC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHHHHHHH---HHCC--CceEEEe
Confidence 56799999764320 011222221111233333333567899999999997655444333443 3332 3568899
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 79 GNHD~~ 84 (188)
T d1xm7a_ 79 GNHDKD 84 (188)
T ss_dssp CTTCCC
T ss_pred cCCCch
Confidence 999974
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.09 E-value=5.2e-05 Score=69.27 Aligned_cols=69 Identities=10% Similarity=0.200 Sum_probs=42.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCc-----hhHHHHHHHhhhhhhcC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQIEPIAST 366 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~-----~~~wd~f~~~i~~l~~~ 366 (619)
.|++++||.|.. ...++++++.. .++|.|+++||++..... ........+.++.+ .
T Consensus 2 Mki~iiSDiHg~---------------~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~ 64 (184)
T d1su1a_ 2 MKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 64 (184)
T ss_dssp CEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--C
Confidence 589999999943 12333443321 589999999999943211 11112233333322 4
Q ss_pred CCeEEccCCCccC
Q 007069 367 VPYMIASGNHERD 379 (619)
Q Consensus 367 vP~~~v~GNHD~~ 379 (619)
.|++.+.||||..
T Consensus 65 ~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 65 HKVIAVRGNCDSE 77 (184)
T ss_dssp GGEEECCCTTCCH
T ss_pred CcEEEecCCCCch
Confidence 5899999999963
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.99 E-value=6.1e-05 Score=76.39 Aligned_cols=90 Identities=19% Similarity=0.243 Sum_probs=48.7
Q ss_pred ceEEEEEeCCEE--EEEEeCCCCC-------------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccC
Q 007069 413 KFWYSTDYGMFR--FCVADTEHDW-------------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 477 (619)
Q Consensus 413 ~~~Ysfd~G~v~--fi~Ldt~~~~-------------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~ 477 (619)
..|.-++.++++ ||.+-+.... ....+..+...+.|++. .+...+|++.|.+. ......
T Consensus 128 ~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~-~~d~~~--- 201 (337)
T d1usha2 128 KPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGH-YDNGEH--- 201 (337)
T ss_dssp BSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCC-CGGGCC---
T ss_pred cceeeeecCCeEEEeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCc-cccccc---
Confidence 345667888865 4666543210 01123333333445432 35667999999886 322110
Q ss_pred CCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 478 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 478 ~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
... .. +...+...+...+||+++.||.|...
T Consensus 202 -~~~-~~-~~~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 202 -GSN-AP-GDVEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp -TTS-CC-CHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred -ccc-cc-hhHHHHHhCcccCceEEecCccCccc
Confidence 100 11 12344444455689999999999753
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.60 E-value=8.7e-05 Score=60.56 Aligned_cols=92 Identities=13% Similarity=0.140 Sum_probs=57.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
-|..|.-+++.-. ..++|+|+|...... .....++|-..-... ....+... . -..++
T Consensus 2 ~p~~p~~L~~~~~-~~~si~vsW~~p~~~-~~~~~i~Y~i~~~~~----~~~~~~~~---------------~--~t~~~ 58 (94)
T d1x5aa1 2 ESLSGLSLKLVKK-EPRQLELTWAGSRPR-NPGGNLSYELHVLNQ----DEEWHQMV---------------L--EPRVL 58 (94)
T ss_dssp CCCCSCCCCEEEE-ETTEEEEECCCCCSS-CCSSCCEEEEEEECS----SCEEEEEE---------------S--SSEEE
T ss_pred cCCCCCceEEEEc-CCCEEEEEEecccCC-CCCcEEEEEEEEecC----CceEEEee---------------c--cCEEE
Confidence 3556766665433 479999999765321 222334454321100 00000000 0 12467
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+||+|+|.|.+||......|.+.||+...|+|.|
T Consensus 59 i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 59 LTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 99999999999999987777888899999999986
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.56 E-value=0.00022 Score=71.68 Aligned_cols=87 Identities=21% Similarity=0.229 Sum_probs=44.0
Q ss_pred CceEEEEEeecCCCCCCCCCc--c-cccccchHHH---HHHHHHhcCCCC-EEEEcCcccccCCchhHHHHHHHhhhhhh
Q 007069 292 SLQRVVIFGDMGKDEADGSNE--Y-NDFQYASLNT---TRQLIQDLKNID-IVFHIGDICYANGYISQWDQFTAQIEPIA 364 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~--~-~~~~~~s~~~---~~~i~~~~~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~ 364 (619)
..++|+...|+|..-.....+ + ..+. +.... +++..++ .+++ +++.+||+............--+.+-+++
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~~~~~~~~g-g~a~~~~~~~~~~~~-~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~m 87 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQPLYHANWG-DFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 87 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHH-HHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred CEEEEEEEeccccCCCCccccccccCccc-cHHHHHHHHHHHHHh-cCCCEEEEECCccCCCCchhhhcccCChHHHHHH
Confidence 349999999999643211101 0 1111 11112 2222222 4566 66679999964321100000012233445
Q ss_pred cCCCe-EEccCCCccCC
Q 007069 365 STVPY-MIASGNHERDW 380 (619)
Q Consensus 365 ~~vP~-~~v~GNHD~~~ 380 (619)
..++| ..++||||+++
T Consensus 88 n~lgyDa~t~GNHEfd~ 104 (322)
T d3c9fa2 88 IKQDYDLLTIGNHELYL 104 (322)
T ss_dssp TTSCCSEECCCGGGSSS
T ss_pred hccCCcEEeecceeccc
Confidence 56777 77899999975
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=0.00016 Score=58.21 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=32.8
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..+|++|+|++.|.+||......|...||+...|+|+|.
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 356899999999999999876567778899999999763
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.00014 Score=58.60 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=32.6
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..+|+||+|+++|.+||......|...||+...|+|.|
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 45689999999999999987666767789999999987
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00075 Score=55.56 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=56.9
Q ss_pred CCcceeeecC-CCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 175 APVYPRLAQG-KTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 175 ~P~~~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
+|..+.+... .+.+++.|+|........ ..-.|+|.......... ...... .+-.+..+
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 75 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 75 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTT-SEEEEE-----------------STTCSEEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcce-eEEEEe-----------------CCCeeEEE
Confidence 4655665443 357899999987543111 11244554433221110 000111 12234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+||+|++.|.+||......|.+.||+...|+|+.
T Consensus 76 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 76 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp ECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 89999999999999987666777889999999865
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00036 Score=55.86 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=57.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|.-+.+... +.++++|+|.-..+ ....-.|+|......... .... ++......|++
T Consensus 4 aP~n~~~~~~-s~~si~l~W~~p~~-~~~~Y~i~y~~~~~~~~~----~~~~-----------------~~~~~~~~i~~ 60 (92)
T d1qg3a1 4 APQNPNAKAA-GSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLL-----------------DSKVPSVELTN 60 (92)
T ss_dssp CCEEEEEEEC-STTCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEE-----------------EESSSEEEECS
T ss_pred cCCCCEEEEc-cCCEEEEEEEecCC-CccceEEeeeeccccccE----EEEe-----------------cCCccEEEECC
Confidence 5655555433 47899999987643 223456777655433211 1111 11234577899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 255 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
|+|++.|.+||......|.+.||+...|+|+
T Consensus 61 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 61 LYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp CCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999998766677778998889884
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.0006 Score=55.51 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=55.2
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.+|..+++..- +.++++|+|......... .-.|+|......... ..... ..+....
T Consensus 4 ~pP~~l~v~~~-~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~-----------------~~~~~~~ 63 (104)
T d2b5ib2 4 MAPISLQVVHV-ETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEE--APLLT-----------------LKQKQEW 63 (104)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTT--SCCEE-----------------ECSCCCE
T ss_pred CCCCCcEEEEE-eCCEEEEEEccccccccccceeEEEEEEeccccccee--eeEEe-----------------cCCCcEE
Confidence 46777776543 358999999876432111 124555443322111 00000 0123345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC----ccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNST----YIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~----~~~S~~~~F~T~p 286 (619)
+.|+||+|+|.|.+||......|. ..||+...|+|.|
T Consensus 64 ~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 64 ICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 688999999999999997543342 3567789999986
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.31 E-value=0.0028 Score=62.59 Aligned_cols=189 Identities=15% Similarity=0.057 Sum_probs=88.2
Q ss_pred eEEEEEeecCCCCCCC----CCcccccccchHHHHHHHHHhc--CCC-CEEEEcCcccccCCchhHHHHHHHhhhhhhcC
Q 007069 294 QRVVIFGDMGKDEADG----SNEYNDFQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIAST 366 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~----~~~~~~~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~ 366 (619)
++|+.++|+|..-... ..+.... +.+..+..++++. +++ -+++.+||++.... ...+.+-. .+-.++..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~~--gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~-~~~~~~g~-~~~~~~n~ 78 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTPV--GGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGL-ADRYFMHR 78 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEE--CCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTH-HHHHHHHH
T ss_pred EEEEEEcccccCcccccccccCCcccc--CcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCH-hHhhhcch-hHHHHHHh
Confidence 6899999998543210 0011111 1133333344331 233 57888999995432 22221111 11122223
Q ss_pred CCe-EEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeeccC---CCCCceEEEEEeCCEEE--EEEeCCCC-----
Q 007069 367 VPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPA---ENRAKFWYSTDYGMFRF--CVADTEHD----- 433 (619)
Q Consensus 367 vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~---~~~~~~~Ysfd~G~v~f--i~Ldt~~~----- 433 (619)
+.+ ..++||||+++... ++...-.... .|+ .+...... ...-..|..++.+++++ |.+-+..-
T Consensus 79 ~gyDa~~~GNHEfd~G~~--~l~~~~~~~~--~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~ 154 (302)
T d2z1aa2 79 LRYRAMALGNHEFDLGPG--PLADFLKGAR--FKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 154 (302)
T ss_dssp TTCCEEECCGGGGTTCHH--HHHHHHTTCC--SEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred cccccccccchhhhcChh--HHHHHhhhcc--cceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccc
Confidence 333 56999999986310 0000000000 000 00000000 01123456678888664 55544320
Q ss_pred ------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecC
Q 007069 434 ------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGH 506 (619)
Q Consensus 434 ------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl~GH 506 (619)
+....+..++..+.|++ .+..-+|++.|... ..-..+.++ -+||+++.||
T Consensus 155 ~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~--------------------~~d~~la~~~~giD~ii~gh 211 (302)
T d2z1aa2 155 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY--------------------GEDLKLARRLVGVQVIVGGH 211 (302)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--------------------HHHHHHHTTCSSCCEEEECS
T ss_pred ccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCc--------------------chhhHHHhcCCCeeeeecCc
Confidence 11123344455555554 45567899999764 011223333 3799999999
Q ss_pred cccceee
Q 007069 507 VHNYERT 513 (619)
Q Consensus 507 ~H~YeRt 513 (619)
.|..-..
T Consensus 212 ~h~~~~~ 218 (302)
T d2z1aa2 212 SHTLLGS 218 (302)
T ss_dssp SCCCBSC
T ss_pred cceeecc
Confidence 9985443
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.00063 Score=56.34 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=58.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|..+++... +.++|+|.|.-+.....+ .-.|.|...+...... ... .......
T Consensus 11 P~~P~~l~~~~~-~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~------~~~--------------~~~~~~~ 69 (107)
T d1x5fa1 11 PSAPRDVVASLV-STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERV------ENT--------------SHPGEMQ 69 (107)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEE------EEC--------------SSTTCSE
T ss_pred CcCCCccEEEEe-cCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEE------EEE--------------eCCCccE
Confidence 456766665332 478999999864321111 2355665443322111 000 0122456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
.+|++|.|+++|.+||......|.+.+|....++|.|
T Consensus 70 ~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 70 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 8899999999999999987666766778888998876
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.00028 Score=57.71 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=32.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..++++|+|++.|.|||......|...||+...++|.|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 45789999999999999987666777889999999875
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00035 Score=57.01 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=58.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.|.+|..+++... +.+++.|.|........ ..-.|+|...+..... ...+. +..+.
T Consensus 3 ~P~~p~~~~~~~~-s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~----~~~~~-----------------~~~~~ 60 (98)
T d1x5la1 3 APSQVVVIRQERA-GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTR 60 (98)
T ss_dssp CCCCCCCEECSCB-CSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSE
T ss_pred CCCCCCceEEEec-cCCEEEEEEECCCCCCCCEEEEEEEeeccccccee----eEEec-----------------CCceE
Confidence 4556666665433 37899999986543210 1234666654332211 01111 12246
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
.+|+||+|+++|.+||......|...||+...|+|.
T Consensus 61 ~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 61 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 679999999999999987765666678999999985
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00032 Score=56.41 Aligned_cols=39 Identities=21% Similarity=0.281 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..++|++|+|+++|.+||......|.+.||+...|+|.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 457799999999999999887666777789999999986
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00041 Score=56.76 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=54.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++.- .+.+++.|+|....+..-..-.|+|...+..... .... .+. ...+|
T Consensus 11 P~~P~~~~~~~-~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~----~~~~----------------~~~--~~~~i 67 (102)
T d1x5za1 11 PGQPLNFKAEP-ESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITI----------------EPG--TSYRL 67 (102)
T ss_dssp CCCCEEEEEEC-SSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEE----------------CSS--SEEEE
T ss_pred CcCCCCeEEEE-ccCCEEEEEEECCCCCCccceEEEEEeCCCCceE----EEEc----------------CCc--CEEEE
Confidence 55666666543 3478999999875431111234445443221110 0000 011 23568
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
+||+|++.|.+||......|.+.+|+...|+|..
T Consensus 68 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 68 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 9999999999999876555666788888898864
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00069 Score=55.16 Aligned_cols=91 Identities=13% Similarity=0.175 Sum_probs=52.9
Q ss_pred CCCCcceeeecC---CCCCcEEEEEEeCCCCC--CCccEEEEe----ecCCCCccccCcceEEecCCcCCCCCccccccC
Q 007069 173 PNAPVYPRLAQG---KTWNEMTVTWTSGYGIN--EAEAFVQWG----RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 243 (619)
Q Consensus 173 ~~~P~~~~La~~---~~~~~m~V~W~t~~~~~--~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 243 (619)
|.+|..+.+.+. ...+++.|+|....... .....++|. ..+..... ...
T Consensus 3 P~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~-----~~~----------------- 60 (104)
T d3d48r2 3 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWE-----IHF----------------- 60 (104)
T ss_dssp CCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCE-----EEE-----------------
T ss_pred CcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeecccccccccee-----eec-----------------
Confidence 667877776543 24688999999764311 112334443 33222111 000
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 285 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 285 (619)
.+....++|.||+|++.|.+||......|. ..||+...|+|+
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 61 AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp EETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 112345678999999999999997755565 578888888875
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.21 E-value=0.0013 Score=53.43 Aligned_cols=94 Identities=11% Similarity=0.050 Sum_probs=57.1
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.+|.-+++... +.++|+|.|......... .-.|+|...++..... ...... .+....
T Consensus 3 ~~P~~~~~~~~-s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~-~~~~~~-----------------~~~~~~ 63 (101)
T d1x4ya1 3 AGPYITFTDAV-NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSD-YKKDMV-----------------EGDRYW 63 (101)
T ss_dssp SCCEEEEEECS-SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGG-CCCEEE-----------------ETTCCE
T ss_pred CCCcccEEEEE-cCCEEEEEEecCcccccccceEEEEEEeeeccceeeee-eeEEEE-----------------cCCeeE
Confidence 35555555433 478999999864321111 1236666543322111 111111 122334
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
.+|++|+|++.|.+||......|...||+...++|..
T Consensus 64 ~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 64 HSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp EEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 5689999999999999987666777899999999853
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.20 E-value=0.0009 Score=54.64 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=54.1
Q ss_pred CCCCcceeeec---CCCCCcEEEEEEeCCCCC--CCcc----EEEEeecCCCCccccCcceEEecCCcCCCCCccccccC
Q 007069 173 PNAPVYPRLAQ---GKTWNEMTVTWTSGYGIN--EAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 243 (619)
Q Consensus 173 ~~~P~~~~La~---~~~~~~m~V~W~t~~~~~--~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 243 (619)
|++|..+.+.+ ....++++|+|......+ .... .|+|...+...+.. ..
T Consensus 3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~------~~---------------- 60 (103)
T d1f6fb2 3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEI------HF---------------- 60 (103)
T ss_dssp CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEE------EE----------------
T ss_pred CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceee------ec----------------
Confidence 67787666654 234688999998864311 1113 44444443332211 00
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 285 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 285 (619)
.+.....+|.||+||++|.+||......|. ..||+.-.++++
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 61 TGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred ccceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 011235778999999999999998754454 457777777663
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.20 E-value=0.00086 Score=53.45 Aligned_cols=84 Identities=20% Similarity=0.271 Sum_probs=50.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+.+.- .+.+++.|.|.-..+ ......|....+.. ..... .. -..++
T Consensus 4 P~~P~~l~~~~-~~~~sv~lsW~~p~~---~~~i~~Y~i~~~~~-------~~~~~---------------~~--t~~~~ 55 (88)
T d1k85a_ 4 PTAPTNLASTA-QTTSSITLSWTASTD---NVGVTGYDVYNGTA-------LATTV---------------TG--TTATI 55 (88)
T ss_dssp CCCCEEEEEEE-ECSSCEEEEEECCSC---CSSEEEEEEEESSS-------EEEEE---------------SS--SEEEE
T ss_pred cCCCCCcEEEE-ecCCEEEEEEeCCCC---CCCEEEEEEEccce-------EEEec---------------CC--CEEEE
Confidence 56666665532 246899999976532 23566665432111 00000 01 13468
Q ss_pred cCCCCCCEEEEEEeeecCCC-CccccceEEEEc
Q 007069 253 KELWPNAMYTYKVGHRLFNS-TYIWSSEYQFKA 284 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg-~~~~S~~~~F~T 284 (619)
+||+|+++|.|+|......| ...+|+...++|
T Consensus 56 ~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 99999999999999765555 346677777765
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00026 Score=58.04 Aligned_cols=38 Identities=18% Similarity=0.175 Sum_probs=32.4
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
..+|+||+|+++|.+||......|.+.||+...|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 46789999999999999877555666788999999987
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00074 Score=54.81 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=55.2
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 175 APVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 175 ~P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
+|.++.++... .++++.|+|..+....-..-.|+|...++.... .... -++-....+|+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~---~~~~-----------------v~~~~~~~~l~ 61 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW---KEAT-----------------IPGHLNSYTIK 61 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCC---EEEE-----------------ECSSCCEEEEC
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeecccccee---eeec-----------------cCCCccEEEEC
Confidence 57788877655 379999999986431112346677764432210 0011 13445677899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
||+||+.|..+|..-...|... .....|+|.
T Consensus 62 gL~P~t~Y~v~v~av~~~G~s~-~~~~~~tT~ 92 (93)
T d1owwa_ 62 GLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 92 (93)
T ss_dssp SCCSSEEEEEEEEEEESSSCEE-EEEEEEEEC
T ss_pred CcccCcEEEEEEEEEeCCCccC-cEEEEEEec
Confidence 9999999999998754333322 124677764
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00054 Score=56.84 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=52.8
Q ss_pred CCCCCcceeeecCC-CCCcEEEEEEeCCCCCCCccE----EEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCe
Q 007069 172 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINEAEAF----VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246 (619)
Q Consensus 172 ~~~~P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~----V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 246 (619)
-|.+|..+.+.+.. +.+++.|+|..+.+ ...+. |+|...++... ..... .++.
T Consensus 10 ~P~~P~~p~~~~~~~~~~sv~l~W~~P~~--~~~~I~~Y~v~~~~~~~~~~-------~~~~~-------------~~~~ 67 (108)
T d1wf5a1 10 LPHAPEHPVATLSTVERRAINLTWTKPFD--GNSPLIRYILEMSENNAPWT-------VLLAS-------------VDPK 67 (108)
T ss_dssp CCCCCSSCEEEECSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTTCCCE-------EEESS-------------CCTT
T ss_pred CCCCCCCCEEEEEeccCCEEEEEEECCCC--CCCccEEEEEEEEeccCCce-------EEeee-------------ecCC
Confidence 35567776655543 46899999987643 22333 44443322211 11000 0122
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
....+++||+|+++|.|||......|...||+.-...|.|
T Consensus 68 ~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~t~P 107 (108)
T d1wf5a1 68 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP 107 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCcCCEECC
Confidence 2356789999999999999876544544555554444443
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0017 Score=53.21 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=55.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCc---cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAE---AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~---~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|.-+.+....+.+++.|.|.......... -.|+|...++..... .... .+--..
T Consensus 5 ~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~---~~~~-----------------~~~~t~ 64 (105)
T d1erna2 5 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ---RVEI-----------------LEGRTE 64 (105)
T ss_dssp CCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE---EEEE-----------------CTTCCE
T ss_pred cCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceE---EEee-----------------cCCccE
Confidence 56788888877777788999998764321121 256665543322110 0000 111235
Q ss_pred EEecCCCCCCEEEEEEeeecC--CCCc---cccceEEEEcC
Q 007069 250 SFLKELWPNAMYTYKVGHRLF--NSTY---IWSSEYQFKAS 285 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~--dg~~---~~S~~~~F~T~ 285 (619)
..|.+|+|+++|.+||..... .+.+ .||+..+++|+
T Consensus 65 ~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 65 CVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 678999999999999987532 2222 46666777774
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.0011 Score=55.05 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=57.0
Q ss_pred CCCCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|..+.+...+ ..++++|.|.-..... ...-.|+|....+..+.... .. ...+....
T Consensus 5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~------~~------------~~~~~~~~ 66 (115)
T d1bqua2 5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIP------PE------------DTASTRSS 66 (115)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECC------GG------------GGCSCCSE
T ss_pred CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccc------cc------------cccccccE
Confidence 5678777776544 4789999998643211 01234555544332211100 00 01233456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p 286 (619)
++|++|.|+++|.+||......|.+. ||+...|+|..
T Consensus 67 ~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 67 FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 77999999999999998765555543 45677888854
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.0021 Score=53.34 Aligned_cols=94 Identities=21% Similarity=0.323 Sum_probs=56.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC----C----ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccC
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE----A----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 243 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~----~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 243 (619)
-|.+|.-+++... .+++.|+|..+..... . .-.|+|...+...... .... .
T Consensus 5 kP~pP~nl~v~~~--~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~-----------------~ 63 (114)
T d2gysa2 5 QPPEPRDLQISTD--QDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDA--AILL-----------------S 63 (114)
T ss_dssp CCCCCEEEEEEEE--TTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTC--EEEE-----------------E
T ss_pred cCCcCCCeEEEEe--CCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEE--EEee-----------------c
Confidence 3677877777543 4689999988653211 1 1245565543322110 0000 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCC------ccccceEEEEcCC
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNST------YIWSSEYQFKASP 286 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~------~~~S~~~~F~T~p 286 (619)
......+.+.+|.|+++|..||......|. ..||+...|+|+|
T Consensus 64 ~~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p 112 (114)
T d2gysa2 64 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQP 112 (114)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred cCceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence 123346788999999999999998644343 3578889999976
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.00075 Score=54.80 Aligned_cols=87 Identities=14% Similarity=0.121 Sum_probs=44.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCC-----ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEA-----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~-----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
|.+|..+.+... ..+++.|+|..+...... .-.|+|....+..... ..... ..+..
T Consensus 2 P~~P~~l~v~~~-~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~-----~~~~~-------------~~~~~ 62 (101)
T d1iarb2 2 PRAPGNLTVHTN-VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-----IYNVT-------------YLEPS 62 (101)
T ss_dssp CCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-----EEEEC-------------SSCCE
T ss_pred cccCCcCEEEEE-eCCeEEEEEccccCCCCccceeeEEEEeeecccceeeee-----eeeec-------------cCccc
Confidence 667776665433 368999999876432111 1356666544332211 01100 12334
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 278 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 278 (619)
..+.+.+|+|+++|.+||......|.+.||+
T Consensus 63 ~~~~i~~L~p~t~Y~~rVrA~~~~g~g~wSe 93 (101)
T d1iarb2 63 LRIAASTLKSGISYRARVRAWAQAYNTTWSE 93 (101)
T ss_dssp EEECC-----CCCEEEEEEEECGGGTCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCCCCcC
Confidence 5678999999999999998764445444544
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.0012 Score=53.45 Aligned_cols=74 Identities=20% Similarity=0.278 Sum_probs=48.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+.|.-. +.+++.|+|..+.....-.-.|+|...+....... .. +.....+|
T Consensus 3 P~~P~nl~v~~~-~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~------------------~~~~~~~~ 59 (95)
T d2b5ic1 3 PWAPENLTLHKL-SESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFSL 59 (95)
T ss_dssp CCCCEEEEEEEE-ETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEEE
T ss_pred CcCCCCCEEEEE-eCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe----ee------------------cccceeEc
Confidence 678888777533 35899999998754333346777776544332210 00 11236778
Q ss_pred cCCCCCCEEEEEEeeec
Q 007069 253 KELWPNAMYTYKVGHRL 269 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~ 269 (619)
.+|.|+++|.+||....
T Consensus 60 ~~L~p~t~Y~frVRa~~ 76 (95)
T d2b5ic1 60 PSVDGQKRYTFRVRSRF 76 (95)
T ss_dssp CSCCTTSCEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEee
Confidence 99999999999998753
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0026 Score=50.87 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=52.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
|.+|..+.+. ..+.++++|.|..+.+... ..=.|+|...++.... .... ++-....
T Consensus 1 P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~----~~~~-----------------~~~~~~~ 58 (93)
T d2vkwa2 1 PSAPKLEGQM-GEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKP----EIRL-----------------PSGSDHV 58 (93)
T ss_dssp CCCCEEEEEE-CTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCC----CEEE-----------------CTTCCEE
T ss_pred CCCCccCEeE-EcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceee----eeec-----------------cCCceEE
Confidence 4567665542 3346899999998754211 1235666655433211 0111 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
+++||+|++.|.+||......|....+ ...|+|.
T Consensus 59 ~i~~L~p~t~Y~~~V~A~N~~G~s~ps-~~~~~T~ 92 (93)
T d2vkwa2 59 MLKSLDWNAEYEVYVVAENQQGKSKAA-HFVFRTA 92 (93)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC
T ss_pred EEeccccceEEEEEEEEEcCCCCcCCE-eEEEEec
Confidence 789999999999999876433332222 4567774
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0014 Score=53.54 Aligned_cols=85 Identities=12% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCCcceeeecC-CCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 173 PNAPVYPRLAQG-KTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 173 ~~~P~~~~La~~-~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
|.+|..+.+... ...+++.|+|......+.. .-.|+|...+...+.. .. ..+..
T Consensus 2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 60 (104)
T d1n26a3 2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTT------WM---------------VKDLQ 60 (104)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEE------EE---------------CGGGC
T ss_pred CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceee------ec---------------cccce
Confidence 678888877653 4578999999976432222 2355565544332211 11 01122
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 278 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 278 (619)
....|.+|+|++.|.+||......|.+.||+
T Consensus 61 ~~~~i~~L~p~t~Y~~rVra~n~~g~g~wSe 91 (104)
T d1n26a3 61 HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 91 (104)
T ss_dssp SEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred EEEEECCCCCCCEEEEEEEEEeCCCccCCcC
Confidence 4567899999999999998765455555665
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0029 Score=51.68 Aligned_cols=95 Identities=18% Similarity=0.057 Sum_probs=57.9
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCc----cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAE----AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.+|..+++.-. +.+++.|.|.......... -.|+|............ ...+..++....
T Consensus 10 ~pP~~v~v~~~-~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 72 (109)
T d1va9a1 10 GPPMDVTLQPV-TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS----------------IVEMKATGDSEV 72 (109)
T ss_dssp SCCEEEEEEEC-SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB----------------CCBCCCCSSEEE
T ss_pred CCCcCcEEEEe-cCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceee----------------eeEEecCCCeeE
Confidence 35666665433 4789999998753211111 25666544332211000 001112345677
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
.+|++|+|++.|.+||......|.+.||..-.|+|.
T Consensus 73 ~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 73 YTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 889999999999999998766666678887777774
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0012 Score=53.29 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=31.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
..+|+||+|+|.|.+||......|...||....++|.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 62 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 4678999999999999998766677788888888774
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0034 Score=50.91 Aligned_cols=91 Identities=16% Similarity=0.088 Sum_probs=53.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
|.+|..+++. .-+.+++.|.|....+ .-..-.|+|...++.... ... ++-....+|
T Consensus 1 P~~P~~l~~~-~~t~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~l 56 (102)
T d2cuha1 1 PDGPTQLRAL-NLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPLQ-----AET-----------------PGSAVDYPL 56 (102)
T ss_dssp CSSCEEEECC-CCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCEE-----EEE-----------------ETTCSEEEE
T ss_pred CcCCCccEEE-EeCCCEEEEEEEeeec-cceeeEEEEEecccccee-----eee-----------------eeeeeeEEE
Confidence 4567666653 2247999999987543 122346666544332110 111 112335779
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
+||+||++|.++|.....+|... .....|+|.+.+
T Consensus 57 ~~L~p~t~Y~~~V~a~~~~~~s~-~~~~~~~T~~~~ 91 (102)
T d2cuha1 57 HDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 91 (102)
T ss_dssp CSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred ccEEeeEEEEEEEEEEeCCCCcC-CEEEEEECCCCC
Confidence 99999999999998764333222 124578887643
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0023 Score=52.34 Aligned_cols=94 Identities=18% Similarity=0.219 Sum_probs=56.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
-|.+|..+++.-. +.++++|+|.-+.. ...+...|-..-.............. +--...+
T Consensus 10 ~P~~P~~~~~~~~-~~~sv~l~W~pp~~--~~~~i~~Y~i~~~~~~~~~~~~~~~~-----------------~~~~~~~ 69 (105)
T d1x3da1 10 EPDIPNPPRIANR-TKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFCQCYM-----------------GSQKQFK 69 (105)
T ss_dssp CCCCCCCCEEEEE-ETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCEEEEE-----------------ESCSEEE
T ss_pred CCcCCCCCEEEEc-cCCEEEEEEECCCC--CcCccEEEEEEEecCCCcceeEEEec-----------------CCccEEE
Confidence 4566777776532 46899999987643 23455555421100000000001111 1123456
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
+.+|+|+++|.+||......|...||+...|+|.
T Consensus 70 ~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 70 ITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred ecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 7899999999999997765677778998899884
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.00081 Score=55.35 Aligned_cols=37 Identities=14% Similarity=0.093 Sum_probs=29.4
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
...++||+||++|.+||......|...||+...|+|+
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 3578999999999999998655566677887777774
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.0012 Score=54.54 Aligned_cols=94 Identities=10% Similarity=0.020 Sum_probs=57.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.+.+|.-+.+.. ..++++|+|.-..+... ..-.|+|....+... ++... .++..+.
T Consensus 7 ~~sPP~~~~~~~--t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~-------~~~~~-------------~~~~~~~ 64 (108)
T d1v5ja_ 7 GLSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-------VLDPA-------------VAGTETE 64 (108)
T ss_dssp CCCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-------EEEEE-------------ECSSCCE
T ss_pred CCCcCCCeEEEE--cCCEEEEEEEecccCCCceeEEEEEeeeeeeeee-------ecccc-------------ccceeee
Confidence 345666665544 45789999986543211 123666765433211 11000 0223456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
.+++||+|+++|.|||..-...|...||+...++|+..
T Consensus 65 ~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 65 LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 77999999999999998765566666777777877654
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.62 E-value=0.0064 Score=47.85 Aligned_cols=75 Identities=19% Similarity=0.318 Sum_probs=46.1
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.-. +.++++|.|....+ .-..-.|+|....+.... ..... ...+-.+..+|+|
T Consensus 3 aP~~l~v~~~-~~~sv~v~W~~p~~-~~~~y~v~y~~~~~~~~~----~~~~~--------------~~~~~~~~~~i~~ 62 (92)
T d1tdqa2 3 APKNLRVGSR-TATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVP--------------KGIGPTTKTTLTD 62 (92)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEE--------------CCSSSEEEEEECS
T ss_pred cCcCCEEEEe-cCCEEEEEEEecCC-cccceEEEEEEcCCCcce----eeEEE--------------ecCCCeeEEEECC
Confidence 5655554322 46899999987643 223456777764432211 01110 0134467789999
Q ss_pred CCCCCEEEEEEeeec
Q 007069 255 LWPNAMYTYKVGHRL 269 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~ 269 (619)
|+|++.|.++|..-.
T Consensus 63 L~p~t~Y~~~V~a~~ 77 (92)
T d1tdqa2 63 LVPGTEYGVGISAVM 77 (92)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEEe
Confidence 999999999998754
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0028 Score=51.62 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=53.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
|.+|..+++... +.+++.|+|......+. ..-.|+|...+...... ... . ....
T Consensus 11 P~~P~~l~v~~~-s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~------~~~---------------~--~~~~ 66 (103)
T d1x5ga1 11 PGPAPNLRAYAA-SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQD------VDV---------------S--SHSY 66 (103)
T ss_dssp CCCCSSCEEEEE-ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCC------EEE---------------C--SSEE
T ss_pred cccCCCcEEEEc-cCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEE------Eec---------------c--ccEE
Confidence 556766665332 36899999986543110 11235665543322110 000 0 1245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
+|+||+|++.|.++|......|.+.+|+...++|.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 67 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred ecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 68999999999999987655566667887888875
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.0063 Score=47.99 Aligned_cols=74 Identities=16% Similarity=0.164 Sum_probs=46.1
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.- .+.++++|+|.-... ....-.|+|...++.... ...+. ++-...++|.
T Consensus 3 d~P~~l~v~~-~s~~s~~l~W~~p~~-~~~~y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (90)
T d1tena_ 3 DAPSQIEVKD-VTDTTALITWFKPLA-EIDGIELTYGIKDVPGDR---TTIDL-----------------TEDENQYSIG 60 (90)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEETTCTTCC---EEEEE-----------------ETTCCEEEEC
T ss_pred CCCCCcEEEE-ecCCEEEEEEEeCce-EeccEEEEEEEcCCCcee---EEEEe-----------------cCCcceeeEe
Confidence 4677777653 347999999986542 223457777655432211 01111 1223457899
Q ss_pred CCCCCCEEEEEEeeec
Q 007069 254 ELWPNAMYTYKVGHRL 269 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~ 269 (619)
||+||++|.++|....
T Consensus 61 ~L~p~t~Y~~~V~a~~ 76 (90)
T d1tena_ 61 NLKPDTEYEVSLISRR 76 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred eecCCCEEEEEEEEEe
Confidence 9999999999998764
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0052 Score=49.26 Aligned_cols=76 Identities=13% Similarity=0.114 Sum_probs=46.1
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.-..+.+.|+|.|.......-..-.|+|....+.... ....+. ++....++|+
T Consensus 3 ~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~ 63 (94)
T d1fnfa1 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN--SLEEVV-----------------HADQSSCTFD 63 (94)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSC--CEEEEE-----------------CTTCCEEECC
T ss_pred CcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCce--EEEEEe-----------------CCCccEEEEC
Confidence 367777776444456799999875431112345677754432211 011111 2234578899
Q ss_pred CCCCCCEEEEEEeee
Q 007069 254 ELWPNAMYTYKVGHR 268 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~ 268 (619)
||+|||+|..+|..-
T Consensus 64 ~L~p~t~Y~v~V~a~ 78 (94)
T d1fnfa1 64 NLSPGLEYNVSVYTV 78 (94)
T ss_dssp CCCTTSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999865
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0045 Score=50.50 Aligned_cols=80 Identities=13% Similarity=0.119 Sum_probs=48.9
Q ss_pred CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEE
Q 007069 186 TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTY 263 (619)
Q Consensus 186 ~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Y 263 (619)
+.++++|.|.-..... ...-.|+|....+...... ... .++-.+..+|++|+||+.|.+
T Consensus 19 ~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~---~~~----------------~~~~~~~~~i~~L~p~t~Y~f 79 (105)
T d2d9qb2 19 QAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWAL---VGP----------------LPLEALQYELCGLLPATAYTL 79 (105)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEE---EEE----------------ECSCEEEEEECSCCSCCCEEE
T ss_pred CCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceee---eec----------------ccCCcceeEEecccCCeEEEE
Confidence 4789999998754211 1124566665433221100 000 134466778999999999999
Q ss_pred EEeeecCCCCc---cccceEEEEc
Q 007069 264 KVGHRLFNSTY---IWSSEYQFKA 284 (619)
Q Consensus 264 rvg~~~~dg~~---~~S~~~~F~T 284 (619)
||......|.+ .||+..+++|
T Consensus 80 rVra~n~~g~G~~S~wS~~~~~~t 103 (105)
T d2d9qb2 80 QIRCIRWPLPGHWSDWSPSLELRT 103 (105)
T ss_dssp EEEEEECSSCCCCCCCCCCEEECC
T ss_pred EEEEEeCCCCCCCcCCCCCEEEeC
Confidence 99876555553 4666777766
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.55 E-value=0.0056 Score=48.88 Aligned_cols=82 Identities=11% Similarity=0.143 Sum_probs=45.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
+|..+++.. -+.+++.|+|......... .-.|+|...+...... ..+. ..+..+..+
T Consensus 9 ~P~~~~v~~-~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~---~~~~----------------~~~~~~~~~ 68 (95)
T d2ibga1 9 VPELLEIEE-YSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYF---KATI----------------EGAHARSFK 68 (95)
T ss_dssp CCEECCCBC-CSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCE---EEEE----------------ECTTCCEEE
T ss_pred CCcCeEEEE-eCCCEEEEEEEeeeeccCCcccccceeEeeeeecceee---eeec----------------cCCceeEEE
Confidence 455554422 2478999999864322111 1257777544322100 0111 012345677
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccc
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIW 276 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~ 276 (619)
|+||+|+|.|.+||......|...|
T Consensus 69 i~~L~p~t~Y~~~V~A~n~~G~s~~ 93 (95)
T d2ibga1 69 IAPLETATMYEFKLQSFSAASASEF 93 (95)
T ss_dssp ECSCCTTCEEEEEEEEECSSCBCCC
T ss_pred EeeccCCeEEEEEEEEEeCCccCCC
Confidence 9999999999999987644443333
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.55 E-value=0.023 Score=53.77 Aligned_cols=190 Identities=15% Similarity=0.179 Sum_probs=106.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCCc---hhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~ 369 (619)
+|++++||.=. ..-.+.+++.+.+ .++.||||..|.++ +.|. ....+++++. .+-+
T Consensus 1 MkiLfiGDIvG-------------~~Gr~~v~~~Lp~Lk~~~DfVIaNgENa-a~G~Git~k~~~~L~~~------GVDv 60 (252)
T d2z06a1 1 MRVLFIGDVMA-------------EPGLRAVGLHLPDIRDRYDLVIANGENA-ARGKGLDRRSYRLLREA------GVDL 60 (252)
T ss_dssp CEEEEECCBCH-------------HHHHHHHHHHHHHHGGGCSEEEEECTTT-TTTSSCCHHHHHHHHHH------TCCE
T ss_pred CeEEEEeccCC-------------HHHHHHHHHHhHHHHhhCCEEEEeeecc-CCCcCCCHHHHHHHHHh------CCCE
Confidence 48999999821 1112333333332 23589999999998 5554 2333344332 3443
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHHH
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADT--EHDWREGTEQYKFIEHC 447 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~~~~Q~~WL~~~ 447 (619)
.+.|||=++..+--.|.+ + .+.-.-.++|....+.-|+.|+.++-++.+++- .....+...=.+-+++.
T Consensus 61 -IT~GNH~wdkkei~~~i~------~--~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~ 131 (252)
T d2z06a1 61 -VSLGNHAWDHKEVYALLE------S--EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRL 131 (252)
T ss_dssp -EECCTTTTSCTTHHHHHH------H--SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHH
T ss_pred -EEcCcccccchhhhhhhc------c--ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHH
Confidence 589999987433211110 0 011112235555567778889988877777663 22222222223334444
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCc
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKN 527 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~ 527 (619)
|++ .+.+.+||=+|.=. + .| +.-.-.+-+-+|.+|+-=|+|.--- +.+.
T Consensus 132 ~~~---~~~~~i~VDfHaEa--T-----------SE----K~A~g~~ldGrvsavvGTHTHV~Ta-----D~rI------ 180 (252)
T d2z06a1 132 LEE---EKADYVLVEVHAEA--T-----------SE----KMALAHYLDGRASAVLGTHTHVPTL-----DATR------ 180 (252)
T ss_dssp HHH---CCCSEEEEEEECSC--H-----------HH----HHHHHHHHBTTBSEEEEESSCSCBS-----CCEE------
T ss_pred Hhh---cCccEEEEEcccch--h-----------hh----heeeeEecCCCEEEEEecCcccccc-----ccEE------
Confidence 444 35666888888532 0 01 1223445577899999999998322 1121
Q ss_pred cccCCCCceEEEE-eCCCCCC
Q 007069 528 YYKGTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 528 ~y~~~~~g~vyiv-~G~gG~~ 547 (619)
-++||-|++ .|+.|..
T Consensus 181 ----Lp~GTayiTDvGM~G~~ 197 (252)
T d2z06a1 181 ----LPKGTLYQTDVGMTGTY 197 (252)
T ss_dssp ----CTTSCEEESCCCCBEES
T ss_pred ----ecCCeEEEccCccccch
Confidence 246888887 7887763
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.0026 Score=52.35 Aligned_cols=38 Identities=16% Similarity=0.039 Sum_probs=27.5
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCC--ccccceEEEEcC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNST--YIWSSEYQFKAS 285 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~--~~~S~~~~F~T~ 285 (619)
...+|++|+||++|.+||.....++. ..||+...++++
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 46778999999999999987543332 456766666653
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.0038 Score=52.27 Aligned_cols=41 Identities=20% Similarity=0.038 Sum_probs=34.5
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
...++|++|+|+|+|.+||......|...||+...|+|.+.
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 35688999999999999999876666667899999999763
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.0043 Score=50.89 Aligned_cols=97 Identities=11% Similarity=0.065 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.- .+.++++|.|.-..+... ..-.|+|.................. ..+....
T Consensus 10 ~P~~P~~~~~~~-~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 73 (111)
T d1wisa1 10 LPGPPTNLGISN-IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS---------------NEPDARS 73 (111)
T ss_dssp CCCCCEEEEEES-CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE---------------SCTTCSE
T ss_pred CCcCCCCCEEEE-cCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee---------------cccceeE
Confidence 355676666542 247899999986543111 1235556543322111100000000 1122335
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccce-EEEEc
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKA 284 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T 284 (619)
..|+||+|++.|.+||......|...||+. ..|+|
T Consensus 74 ~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~T 109 (111)
T d1wisa1 74 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109 (111)
T ss_dssp EEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEc
Confidence 678999999999999987644454455543 34555
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0077 Score=49.22 Aligned_cols=94 Identities=13% Similarity=0.138 Sum_probs=54.0
Q ss_pred cccccCCCCCcceeeec-CCCCCcEEEEEEeCCCCCC-C----ccEEEEeecCCCCccccCcceEEecCCcCCCCCcccc
Q 007069 167 KIAFTNPNAPVYPRLAQ-GKTWNEMTVTWTSGYGINE-A----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVG 240 (619)
Q Consensus 167 ~~~~~~~~~P~~~~La~-~~~~~~m~V~W~t~~~~~~-~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g 240 (619)
|+...-|.+|.-+.+.. ....++++|+|..+..... . .-.++|...+...+.. ..
T Consensus 2 p~~iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~-----~~-------------- 62 (109)
T d1uc6a_ 2 PLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH-----VE-------------- 62 (109)
T ss_dssp CTTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC-----EE--------------
T ss_pred CCCCEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEE-----ec--------------
Confidence 44445677888888764 3457899999998642111 1 1334454433322110 00
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEE
Q 007069 241 WRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFK 283 (619)
Q Consensus 241 ~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~ 283 (619)
.+-....+|.+|+|+|.|.+||.... ++.. .||+...++
T Consensus 63 ---~~~~~~~~i~~L~~~t~Y~~rVrA~~-~~~g~wS~WS~~~~~t 104 (109)
T d1uc6a_ 63 ---LSNGTAHTITDAYAGKEYIIQVAAKD-NEIGTWSDWSVAAHAT 104 (109)
T ss_dssp ---ESSCSEEEETTCCSSSCEEEEEECCB-SSSCCCCCCCEEEEEC
T ss_pred ---cCCceeEEeCCCCCCCEEEEEEEEEE-CCCCCcCCCCCCEEeE
Confidence 01123466899999999999998643 2333 455555543
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0091 Score=50.22 Aligned_cols=87 Identities=16% Similarity=0.089 Sum_probs=53.5
Q ss_pred CCCcEEEEEEeCCCCCC-CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEE
Q 007069 186 TWNEMTVTWTSGYGINE-AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYK 264 (619)
Q Consensus 186 ~~~~m~V~W~t~~~~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yr 264 (619)
+.++++|+|.-...... ..-.|+|......... ..-.+... ..+..+..+|+||+|+|.|.+|
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~--~~~~~~~v--------------~~~~~~s~~i~~L~p~t~Y~f~ 91 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT--SSWQNLDA--------------KVPTERSAVLVNLKKGVTYEIK 91 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT--TCCEEEEC--------------CCTTCCEEEEESCCSSEEEEEE
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCC--cceEEEEe--------------ccCceeEEEECCCCCCCEEEEE
Confidence 46899999987542111 1246777654322110 00011110 1123455678999999999999
Q ss_pred EeeecCCCCccccceEEEEcCCCC
Q 007069 265 VGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 265 vg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
|......|...+|+...|+|.+..
T Consensus 92 V~A~n~~G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 92 VRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp EEEESSSCCCCCCCCEEEEECSSC
T ss_pred EEEEeCCcCcCCCCCEEEEeCCCC
Confidence 987765666677888899998753
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.01 Score=49.37 Aligned_cols=96 Identities=10% Similarity=0.084 Sum_probs=55.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+.+... +.+++.|.|..............|... ............. ..++.....+|+|
T Consensus 14 ~P~~v~~~~~-~~~si~v~W~~p~~~~~ng~i~~Y~v~----y~~~~~~~~~~~~------------~~~~~~~~~~i~~ 76 (119)
T d1x5ha1 14 APQNLSLEVR-NSKSIMIHWQPPAPATQNGQITGYKIR----YRKASRKSDVTET------------LVSGTQLSQLIEG 76 (119)
T ss_dssp CCEEEEEECC-SSSEEEEEEECCCTTTCCSCEEEEBCE----EEETTEEEEEECC------------BCCTTCCEEEEEC
T ss_pred CCcCeEEEEe-cCcEEEEEEEcccccCCCCCEEEEEEE----Eeecccccceeee------------ecCCCccEEEeCC
Confidence 5666665433 468999999865321111234445421 0000000000000 0123345678999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 255 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
|+|++.|.++|......|.+.||+...|+|.+.
T Consensus 77 L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 77 LDRGTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 999999999998765556667899899999753
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.40 E-value=0.0022 Score=53.86 Aligned_cols=39 Identities=13% Similarity=0.255 Sum_probs=32.4
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..+|++|+|+++|.+||......|...||+...|+|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 456899999999999999876566677899999998754
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.37 E-value=0.0018 Score=60.44 Aligned_cols=62 Identities=16% Similarity=0.288 Sum_probs=42.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...+++++++. ...|.++++||+++ .|..+ .+-++. ..+.-+..
T Consensus 14 rI~vIgDIHG~---------------~~~L~~lL~~i~~~~~~d~lv~lGD~vD-rGp~s--~~vl~~----l~~~~~~~ 71 (219)
T d1g5ba_ 14 NIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVD-RGAEN--VECLEL----ITFPWFRA 71 (219)
T ss_dssp CEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSS-SSSCH--HHHHGG----GGSTTEEE
T ss_pred eEEEEEecccC---------------HHHHHHHHHHcCCCCCCCEEEEeCCccc-cCccH--HHHHHH----hhcccccc
Confidence 68999999854 34566666653 35689999999995 44432 122222 23455789
Q ss_pred ccCCCcc
Q 007069 372 ASGNHER 378 (619)
Q Consensus 372 v~GNHD~ 378 (619)
+.||||.
T Consensus 72 i~GNHE~ 78 (219)
T d1g5ba_ 72 VRGNHEQ 78 (219)
T ss_dssp CCCHHHH
T ss_pred ccCcHHH
Confidence 9999995
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.35 E-value=0.005 Score=50.73 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=45.7
Q ss_pred ccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 170 FTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 170 ~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
++-|.+|..+.+.- .+.++++|+|.-..+... ..-.|+|............. ... ++..
T Consensus 8 ~~pP~~P~~~~v~~-~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~-~~~-----------------~~~~ 68 (108)
T d1x4za1 8 LSPPEAPDRPTIST-ASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT-SAI-----------------PPSR 68 (108)
T ss_dssp CCCCCCCCCCEEEE-CCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE-EEE-----------------CTTC
T ss_pred cCCCccCCCCEEEE-ccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEE-Eee-----------------cCCc
Confidence 45677888777643 346899999964432110 12345665433221110000 000 1223
Q ss_pred EEEEecCCCCCCEEEEEEeeec
Q 007069 248 HTSFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
...+++||+|+++|.|||....
T Consensus 69 ~~~~v~~L~p~t~Y~frV~A~N 90 (108)
T d1x4za1 69 LSVEITGLEKGISYKFRVRALN 90 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEC
Confidence 4567899999999999998753
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.33 E-value=0.053 Score=51.35 Aligned_cols=192 Identities=14% Similarity=0.080 Sum_probs=105.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCCc---hhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~ 369 (619)
+|++++||.=. ..-.+.+++.+.+ .++.||||..|.++ ++|. ....+++++. .+-+
T Consensus 1 MkILfiGDIvG-------------~~Gr~~v~~~Lp~lk~~~DfVIaNgENa-a~G~Git~~~~~~l~~~------GvDv 60 (255)
T d1t70a_ 1 MRVLFIGDVFG-------------QPGRRVLQNHLPTIRPQFDFVIVNMENS-AGGFGMHRDAARGALEA------GAGC 60 (255)
T ss_dssp CEEEEECCBBH-------------HHHHHHHHHHHHHHGGGCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCSE
T ss_pred CeEEEEecCCC-------------HHHHHHHHHHhHHHHhhCCEEEECCccC-CCCcCCCHHHHHHHHHc------CCcE
Confidence 48999999821 1123344443332 13589999999999 5554 2333333332 3444
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccC-CCCCceEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHH
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDYGMFRFCVADT--EHDWREGTEQYKFIEH 446 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~~~~Q~~WL~~ 446 (619)
.+.|||=++..+--.+... +. .....-.++|. ...+.-|+.++..+.++.+++- .....+-..=.+-+++
T Consensus 61 -iT~GNH~wdkkei~~~i~~-----~~-~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~ 133 (255)
T d1t70a_ 61 -LTLGNHAWHHKDIYPMLSE-----DT-YPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDA 133 (255)
T ss_dssp -EECCTTTTSSTTHHHHHHT-----TC-SCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHH
T ss_pred -EEcCchhhcchhHHHHHhh-----cc-hhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHH
Confidence 5899999874332111110 00 00011112342 2346667888887766666653 3332332233444566
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCC
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEK 526 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~ 526 (619)
.|++ .+.+.+||=+|.=- + .| +.-.-.+-+-+|.+|+-=|+|.--- +.+.
T Consensus 134 ~l~~---~~~~~i~VDfHaEa--T-----------SE----K~A~g~~ldGrvsav~GTHTHV~Ta-----D~rI----- 183 (255)
T d1t70a_ 134 LLER---DDLGTVFVDFHAEA--T-----------SE----KEAMGWHLAGRVAAVIGTHTHVPTA-----DTRI----- 183 (255)
T ss_dssp HTTC---SSCCEEEEEEECSC--H-----------HH----HHHHHHHHTTSSSEEEEESSCSCBS-----CCEE-----
T ss_pred HHhh---cCCCeEEEEccchh--H-----------HH----HHHHHhhhcCcEEEEEecCcccccc-----cceE-----
Confidence 6654 35566788888532 0 11 1223345577899999999998322 1121
Q ss_pred ccccCCCCceEEEE-eCCCCCC
Q 007069 527 NYYKGTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 527 ~~y~~~~~g~vyiv-~G~gG~~ 547 (619)
-++||-|++ .|+.|..
T Consensus 184 -----lp~GTay~TDvGMtG~~ 200 (255)
T d1t70a_ 184 -----LKGGTAYQTDAGFTGPH 200 (255)
T ss_dssp -----ETTTEEEESCCCCBEES
T ss_pred -----ecCCcEEEecCccccch
Confidence 146888887 7887763
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.24 E-value=0.0078 Score=49.98 Aligned_cols=94 Identities=7% Similarity=0.055 Sum_probs=54.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+.+.. .+.+++.|.|........ ..-.|+|........... .... .+....
T Consensus 20 ~P~~P~~~~~~~-~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~--~~~~-----------------~~~~~~ 79 (117)
T d1wfoa1 20 VPGPPMGILFPE-VRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT--VEVL-----------------APSARQ 79 (117)
T ss_dssp CCCCCCCCEEEE-ECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC--EEEE-----------------CTTCCE
T ss_pred CCcCCCCcEEEE-ecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEe--EEec-----------------CCceEE
Confidence 356666666543 247899999976543211 112466654433221100 0010 111234
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
..|+||+|++.|.+||......|...+|+...++|.
T Consensus 80 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 80 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115 (117)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred EEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence 568999999999999997755565567777777663
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.19 E-value=0.017 Score=47.07 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=25.4
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007069 245 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWS 277 (619)
Q Consensus 245 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S 277 (619)
+--...+|+||+|+++|.+||......|...+|
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S 97 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILAVYSNNDNKES 97 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEEEETTSCEEEC
T ss_pred cceeEEEECCCcCCcEEEEEEEEEcCCCCCCCC
Confidence 455678899999999999999976544554444
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.12 E-value=0.0076 Score=48.64 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=44.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|..+.+.- .+.++++|+|.-...... ..-.|+|...++..+..... .+.....
T Consensus 2 P~~P~~~~v~~-~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~--------------------~~~~~~~ 60 (98)
T d1x5ya1 2 TSAPQHLTVED-VTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERCG 60 (98)
T ss_dssp CCCCEEEEEEE-ECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSSE
T ss_pred CCCCcCcEEEE-ccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee--------------------ecCceeE
Confidence 45676666542 246899999986432111 12456666654433221110 0111234
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007069 250 SFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
.+++||+||+.|.|||....
T Consensus 61 ~~v~~L~~~~~Y~frV~A~n 80 (98)
T d1x5ya1 61 FTVKDLPTGARILFRVVGVN 80 (98)
T ss_dssp EEEECCCTTCCEEEEEEEEE
T ss_pred EEECCCcCCeEEEEEEEEEC
Confidence 57899999999999998763
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.11 E-value=0.0086 Score=48.98 Aligned_cols=79 Identities=13% Similarity=0.054 Sum_probs=47.2
Q ss_pred CCCcEEEEEEeCCCCCC--CccEEEEeecCCC-CccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 007069 186 TWNEMTVTWTSGYGINE--AEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYT 262 (619)
Q Consensus 186 ~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~ 262 (619)
..+++.|.|........ ..-.|+|....+. .+... .. ...-.+..+|++|.|+|.|.
T Consensus 20 ~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v----~~----------------~~~~~~~~~l~~L~p~t~Y~ 79 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLV----FH----------------LPSSKDQFELCGLHQAPVYT 79 (106)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEE----EE----------------EESCEEEEEECCCCSCSCEE
T ss_pred CCCEEEEEEcCcccCCccceEEEEEEeeccccccceee----ec----------------ccCCceEEEEeccCCCeEEE
Confidence 57899999986543110 1126777654322 22111 00 01234667799999999999
Q ss_pred EEEeeecCCCCccc---cceEEEEc
Q 007069 263 YKVGHRLFNSTYIW---SSEYQFKA 284 (619)
Q Consensus 263 Yrvg~~~~dg~~~~---S~~~~F~T 284 (619)
+||......|.+.| |...+|++
T Consensus 80 frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 80 LQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp EEEEEEESSSCCCCCCCCCCEEECC
T ss_pred EEEEEEeCCCCCCCcCCCCCeEecC
Confidence 99987655666444 45566654
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.011 Score=46.71 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=44.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
-.+|..+++.- -+.++++|.|....+ ....-.++|....+.... ... ...+.....+|
T Consensus 2 ~d~P~~l~v~~-vt~~sv~l~W~~p~~-~~~~y~i~~~~~~~~~~~-------~~~-------------~~~~~~~~~~i 59 (94)
T d1j8ka_ 2 IDRPKGLAFTD-VDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIHE-------LFP-------------APDGEEDTAEL 59 (94)
T ss_dssp CCCCCCCEEEE-EETTEEEEECCCCSS-CCSCEEEEEEETTTEEEE-------ECC-------------CCCSSCCEEEE
T ss_pred CCCCCCCEEEE-ecCCEEEEEEeCCCc-cccceEEEEEeecCCCce-------EEE-------------ecCCCccEEEE
Confidence 34676666532 136899999976532 123456777654332110 000 01123356778
Q ss_pred cCCCCCCEEEEEEeeec
Q 007069 253 KELWPNAMYTYKVGHRL 269 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~ 269 (619)
+||+|||.|.++|....
T Consensus 60 ~~L~p~t~Y~~~V~a~~ 76 (94)
T d1j8ka_ 60 QGLRPGSEYTVSVVALH 76 (94)
T ss_dssp CSCCCCSEEEEEEEECS
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998753
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.016 Score=45.53 Aligned_cols=73 Identities=19% Similarity=0.283 Sum_probs=43.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.- -+.++++|.|....+.....-.|+|....+.... ...+. ++-...++|+|
T Consensus 3 pP~~l~~~~-~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 61 (91)
T d1fnfa2 3 PPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV---AELSI-----------------SPSDNAVVLTN 61 (91)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCC---EEEEE-----------------CTTCCEEEECS
T ss_pred cCCceEEEE-eCCCEEEEEEEecCCCCcceeEEEEEECCCCccE---EEEEe-----------------CCCceEEEEec
Confidence 455555532 2478999999876432112346777765433211 01111 12234578999
Q ss_pred CCCCCEEEEEEeee
Q 007069 255 LWPNAMYTYKVGHR 268 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~ 268 (619)
|+|+++|.++|..-
T Consensus 62 L~p~t~Y~~~V~a~ 75 (91)
T d1fnfa2 62 LLPGTEYVVSVSSV 75 (91)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred eeCCCEEEEEEEEE
Confidence 99999999999865
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.02 Score=45.26 Aligned_cols=87 Identities=21% Similarity=0.234 Sum_probs=49.5
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+.+.- .+.++++|+|....+ ....-.|+|...++... .... ++.....+|+|
T Consensus 4 ~P~~l~~~~-~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~i~~ 59 (93)
T d2cuma1 4 APRDLEAKE-VTPRTALLTWTEPPV-RPAGYLLSFHTPGGQTQ-----EILL-----------------PGGITSHQLLG 59 (93)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEECTTSCEE-----EEEE-----------------CSSCSEEEECS
T ss_pred cCCCCEEEE-eCCCEEEEEEEcccc-ccccEEEEEEccccccE-----EEEE-----------------CCCccEEEEeC
Confidence 454444432 247899999987643 12345667765433211 0111 12234567999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 255 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
|+||++|.++|..-...|.... ....|+|..
T Consensus 60 L~p~t~Y~~~V~a~~~~g~s~~-~~~~~tT~g 90 (93)
T d2cuma1 60 LFPSTSYNARLQAMWGQSLLPP-VSTSFTTGG 90 (93)
T ss_dssp CCTTCEEEEEEEEEBTTBCCCC-EEEEEECCC
T ss_pred ccCCCEEEEEEEEEeCCCCCCC-EEEEEEeCC
Confidence 9999999999987643332221 134677744
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.0063 Score=52.13 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..++|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 4578999999999999999876566667888899999754
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.013 Score=46.02 Aligned_cols=86 Identities=13% Similarity=0.007 Sum_probs=48.3
Q ss_pred CcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCC
Q 007069 176 PVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKEL 255 (619)
Q Consensus 176 P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL 255 (619)
|..++++- -+.++++|.|..... ......++|.......... .... +.-.-..+|+||
T Consensus 3 P~~l~~~~-v~~~si~l~W~~p~~-~~~~~~i~~~~~~~~~~~~---~~~~-----------------~~~~~~~~i~~L 60 (90)
T d1fnha1 3 PTDLKFTQ-VTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPMK---EINL-----------------APDSSSVVVSGL 60 (90)
T ss_dssp CEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEESSSCSCCC---EEEE-----------------CTTCCEEEECSC
T ss_pred CCCEEEEE-ecCCEEEEEEEccce-eccceEEEEEeeeCCCceE---EEEe-----------------CCCCeEEEEecc
Confidence 44444432 247899999988643 2334567776543322110 0110 111235689999
Q ss_pred CCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 256 WPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 256 ~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
+||++|.++|......|....+ ...|+|
T Consensus 61 ~p~t~Y~~~V~a~n~~g~s~~~-~~~~~T 88 (90)
T d1fnha1 61 MVATKYEVSVYALKDTLTSRPA-QGVVTT 88 (90)
T ss_dssp CTTCEEEEEEEEEETTEECCCE-EEEEEC
T ss_pred cCceEEEEEEEEEeCCCCcCCE-eEEEEc
Confidence 9999999999876433332222 234554
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.00 E-value=0.0082 Score=47.02 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=43.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++... +.++++|.|....+ .-..-.|+|...++.... .... +-.-.++|+|
T Consensus 3 ~P~nl~v~~~-~~~s~~l~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~~-----------------~~~~~~~~~~ 58 (86)
T d1tdqa3 3 SPRDLMVTAS-SETSISLIWTKASG-PIDHYRITFTPSSGISSE-----VTVP-----------------RDRTSYTLTD 58 (86)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCCS-CCSEEEEEEECSSSCCEE-----EEEE-----------------SSCSEEEECC
T ss_pred cCCCCEEEEe-cCCEEEEEEeCCCC-CccceEEEEecccccceE-----EEeC-----------------CCccEEEECC
Confidence 4555555432 47899999988643 223357777754432211 1111 1123578999
Q ss_pred CCCCCEEEEEEeeec
Q 007069 255 LWPNAMYTYKVGHRL 269 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~ 269 (619)
|+||+.|.++|....
T Consensus 59 L~p~t~Y~v~V~a~~ 73 (86)
T d1tdqa3 59 LEPGAEYIISITAER 73 (86)
T ss_dssp CCTTCCEEEEEEEEE
T ss_pred CccccEEEEEEEEEc
Confidence 999999999998753
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.017 Score=45.42 Aligned_cols=73 Identities=15% Similarity=0.122 Sum_probs=44.2
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.- .+.++|+|.|....+ ....-.|+|....+.... ... .++-.....|+
T Consensus 3 spP~~l~v~~-~~~~si~v~W~~p~~-~~~~Y~i~~~~~~~~~~~----~~~-----------------~~~~~~~~~i~ 59 (90)
T d1fnha2 3 SPPRRARVTD-ATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRT-----------------IKPDVRSYTIT 59 (90)
T ss_dssp CCCEEEEEEE-ECSSEEEEEEECCSS-CCCCEEEEEEESSSSCCE----EEE-----------------CCTTCSEEEEE
T ss_pred CcCCCCEEEE-ecCCEEEEEEECCCC-CCceeEEEEEEccCCceE----EEe-----------------cCCCccEEEeC
Confidence 3566666642 347899999986542 123346667654332111 000 01223456789
Q ss_pred CCCCCCEEEEEEeeec
Q 007069 254 ELWPNAMYTYKVGHRL 269 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~ 269 (619)
||+||++|.++|....
T Consensus 60 ~L~p~t~Y~~~V~a~~ 75 (90)
T d1fnha2 60 GLQPGTDYKIYLYTLN 75 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CCCCCcEEEEEEEEEe
Confidence 9999999999998753
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.94 E-value=0.018 Score=45.06 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=43.3
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.- .+.++++|+|.-... .-..-.|+|...++....... ..++-....+|+|
T Consensus 3 aP~nl~v~~-~~~~s~~l~W~~p~~-~i~~Y~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 60 (89)
T d1fnha3 3 APSNLRFLA-TTPNSLLVSWQPPRA-RITGYIIKYEKPGSPPREVVP--------------------RPRPGVTEATITG 60 (89)
T ss_dssp CCEEEEEEE-EETTEEEEEEECCSS-CCSEEEEEEECTTSCCEECTT--------------------CCCTTCCEEEEES
T ss_pred cCcCCEEEE-ecCCEEEEEEeCCCc-CCceEEEEEeeccCCccEEEE--------------------EcCCCccEEEEEe
Confidence 465555532 236899999987542 122346777654432211000 0012234578999
Q ss_pred CCCCCEEEEEEeeec
Q 007069 255 LWPNAMYTYKVGHRL 269 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~ 269 (619)
|+||+.|.++|..-.
T Consensus 61 L~p~t~Y~~~V~a~n 75 (89)
T d1fnha3 61 LEPGTEYTIYVIALK 75 (89)
T ss_dssp CCTTCEEEEEEEEES
T ss_pred eeCCCEEEEEEEEEc
Confidence 999999999998753
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.94 E-value=0.014 Score=46.22 Aligned_cols=74 Identities=16% Similarity=0.217 Sum_probs=45.1
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
.+|..+++.-. ..++++|+|..... ....-.|+|...++.... ..+. .++.....+++
T Consensus 5 ~~P~~l~v~~v-~~~si~v~W~~p~~-~~~~y~i~~~~~~~~~~~-----~~~~---------------~~~~~~~~~i~ 62 (93)
T d1tdqa1 5 DGPTQILVRDV-SDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK-----TTFR---------------LQPPLSQYSVQ 62 (93)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC-----EEEE---------------ECTTCSEEEEC
T ss_pred CcCCCCEEEEe-CCCEEEEEEEcccc-CCCceEEEEEeccCccee-----eEEE---------------eCCCceEEEEe
Confidence 45666665443 35799999986543 223446777665432211 1111 11223456899
Q ss_pred CCCCCCEEEEEEeeec
Q 007069 254 ELWPNAMYTYKVGHRL 269 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~ 269 (619)
||+||++|.++|..-.
T Consensus 63 ~L~p~t~Y~v~V~a~~ 78 (93)
T d1tdqa1 63 ALRPGSRYEVSISAVR 78 (93)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CcccceEEEEEEEEEe
Confidence 9999999999998753
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.94 E-value=0.0045 Score=49.98 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=43.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
|.+|.-+++..+ .++++|+|.-+.+... ..-.|+|............. .... -.+..
T Consensus 6 P~~P~~~~v~~~--~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~------------------~~~~~ 64 (100)
T d1cfba1 6 PNAPKLTGITCQ--ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY-EKVP------------------NTDSS 64 (100)
T ss_dssp CCCCEEEEEEEC--SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE-EEEE------------------TTCSE
T ss_pred CCcCcCcEEEEc--CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEe-eecC------------------CceEE
Confidence 667777776543 4689999986643111 12356665543322111100 0000 01234
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007069 251 FLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~ 269 (619)
.+++|+|++.|.+||....
T Consensus 65 ~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 65 FVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp EEEECCSSEEEEEEEEEEE
T ss_pred EEecCCCCCEEEEEEEEEe
Confidence 6789999999999998764
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.93 E-value=0.019 Score=44.83 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=45.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.- .+.++++|+|....+ ....-.|+|...+..... ... ++-....+|+|
T Consensus 2 aP~~l~v~~-~t~~sv~v~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~~~~ 57 (87)
T d1qr4a1 2 NPKDLEVSD-PTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKNE-----MEI-----------------PVDSTSFILRG 57 (87)
T ss_dssp CCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECTTCCEEE-----EEE-----------------CTTCSEEEEES
T ss_pred cCcCcEEEE-ecCCEEEEEEECCCC-CcceeEEEeecCCcceeE-----EeC-----------------CCCcCEEEECC
Confidence 566666532 246899999987643 122346777654332110 111 11234578999
Q ss_pred CCCCCEEEEEEeeecCCC
Q 007069 255 LWPNAMYTYKVGHRLFNS 272 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~~dg 272 (619)
|+||++|.++|..-..+|
T Consensus 58 L~p~t~Y~v~V~a~~~~~ 75 (87)
T d1qr4a1 58 LDAGTEYTISLVAEKGRH 75 (87)
T ss_dssp CCSSCEEEEEEEEESSSC
T ss_pred CCcCCEEEEEEEEEcCCC
Confidence 999999999998764333
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.0063 Score=50.74 Aligned_cols=92 Identities=15% Similarity=0.139 Sum_probs=50.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-C-CccEEEEeecCCCC-ccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-E-AEAFVQWGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|..+.+.-- +.++++|+|.-..+.. + ..-.|+|....... +... ... .-...
T Consensus 16 P~pP~~~~v~~~-~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~-----------------~~~~~ 73 (117)
T d1uema_ 16 PGPPSKPQVTDV-TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTV----ANH-----------------VKTTL 73 (117)
T ss_dssp CBCCCCCEEEEE-CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEE----EEE-----------------ECSSE
T ss_pred CcCCCCCEEEEc-cCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEe----ccc-----------------ccccc
Confidence 567777776432 3689999997543211 0 11345555432211 1100 000 00124
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASP 286 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p 286 (619)
.+|+||+|++.|.+||......|...||+.- .++|.+
T Consensus 74 ~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t~~ 111 (117)
T d1uema_ 74 YTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQD 111 (117)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCC
T ss_pred ceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEeCC
Confidence 5689999999999999876444444556543 356654
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.013 Score=49.29 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=54.9
Q ss_pred ccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeE
Q 007069 170 FTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 247 (619)
Q Consensus 170 ~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 247 (619)
+.-|.+|..+++... +.+++.|.|.-...... ..-.++|........... .... ....
T Consensus 14 ~d~P~~P~~~~v~~~-~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~ 73 (127)
T d1ueya_ 14 YDVPNPPFDLELTDQ-LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH--HQTE-----------------VSGT 73 (127)
T ss_dssp CCSCCCCEEEEEECC-SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEE--EEEE-----------------EESS
T ss_pred cccCcCCCCcEEEEe-cCCeEEEEEeCCcccccceEeeeeeeccccccceeEE--EEee-----------------cCCc
Confidence 345777877776533 36899999987643211 122334433322211100 0000 0122
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPY 287 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~ 287 (619)
+...|++|+|+++|.+||......|...||+. ..|+|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 34567899999999999987655555566654 45666654
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.86 E-value=0.034 Score=46.34 Aligned_cols=110 Identities=9% Similarity=0.087 Sum_probs=60.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.|.+|..+.+.. ..+++.|+|.-+.... -..-.|+|...+......... ..+.+ .|..+.... ..++..-.
T Consensus 7 ~P~aP~~v~v~~--~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~-~~~~~--~~~~~~~~~--~~~~~~~~ 79 (123)
T d1wfta_ 7 GPGAPSTVRISK--NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQ-LVFMR--IYCGLKTSC--TVTAGQLA 79 (123)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCC-CEEEE--EEEESCSEE--EEEHHHHT
T ss_pred CCcCCcccEEEe--CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccce-eeeEE--EecCCceeE--eecCCccE
Confidence 466777777654 4689999998654311 113466776554432211110 00110 000000000 00111122
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 288 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 288 (619)
..+++|+|++.|.+||......|...||+...|+|....
T Consensus 80 ~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 80 NAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp TCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred EEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 357899999999999998755566678888889986643
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.85 E-value=0.015 Score=45.54 Aligned_cols=71 Identities=23% Similarity=0.225 Sum_probs=43.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+.+.-. +.++++|+|....+ ....-.|+|......... ..++. +-...++|+|
T Consensus 3 ~P~~l~v~~v-~~~s~~l~W~~~~~-~~~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~ 59 (88)
T d1qr4a2 3 SPKGISFSDI-TENSATVSWTPPRS-RVDSYRVSYVPITGGTPN----VVTVD-----------------GSKTRTKLVK 59 (88)
T ss_dssp CCSCEEEESC-CSSCEEEEECCCSS-CCSEEEEEEEETTCCCCE----EEEEE-----------------TTCCEEEECS
T ss_pred CCcceEEEEe-cCCEEEEEEEcccE-eeceEEEEEEeccCCceE----EEEec-----------------CCccEEEECC
Confidence 4556554333 37899999986542 223456777765432211 11111 1224678999
Q ss_pred CCCCCEEEEEEeee
Q 007069 255 LWPNAMYTYKVGHR 268 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~ 268 (619)
|+||++|.++|..-
T Consensus 60 L~p~t~Y~~~V~a~ 73 (88)
T d1qr4a2 60 LVPGVDYNVNIISV 73 (88)
T ss_dssp CCSSCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 99999999999875
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.0095 Score=48.00 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=43.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
|.+|.-+++... +.++++|.|.-+..... ..-.|+|.......... ........ ...-...+
T Consensus 3 P~~P~~~~~~~~-~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~ 66 (103)
T d1qg3a2 3 PSEPGRLAFNVV-SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI-GPMKKVLV--------------DNPKNRML 66 (103)
T ss_dssp CCCCCCCEEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC-SCCEEEEE--------------CCTTCCEE
T ss_pred CccCCCcEEEEe-cCCEEEEEEEECccCCCCceEEEEEeeccccccccc-cceEEEEe--------------cCCCceEE
Confidence 456666655432 36899999986543211 11245554433221111 00011100 11223467
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007069 251 FLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~ 269 (619)
+++||+|++.|.+||....
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n 85 (103)
T d1qg3a2 67 LIENLRESQPYRYTVKARN 85 (103)
T ss_dssp EECCCCTTCCEEEEEEEEE
T ss_pred EEeecCCCCEEEEEEEEEc
Confidence 8999999999999998753
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.74 E-value=0.017 Score=46.24 Aligned_cols=83 Identities=13% Similarity=0.178 Sum_probs=46.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccc-c--CcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHS-P--AGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~-~--~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|..|..+++.-- +.++++|.|....+ ....-.|+|.......... . ...... ..++-...
T Consensus 4 Pp~~~~l~v~~~-t~~sv~v~W~pp~~-~~~~y~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 66 (101)
T d2cuia1 4 RPRLSQLSVTDV-TTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQREL---------------MVPGTRHS 66 (101)
T ss_dssp CCCCCCCEEESC-CSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEE---------------EEETTCCE
T ss_pred ccCCCCcEEEEE-CCCEEEEEEEeccc-cccceEEEEEecCCCceeeccCCcceeEe---------------ecccceeE
Confidence 444555555332 47899999976532 2234577777543322111 0 100110 01233455
Q ss_pred EEecCCCCCCEEEEEEeeecCCC
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNS 272 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg 272 (619)
.+|+||+|+++|.++|.....+|
T Consensus 67 ~~v~~L~p~t~Y~~~V~a~~~~g 89 (101)
T d2cuia1 67 AVLRDLRSGTLYSLTLYGLRGPH 89 (101)
T ss_dssp EEECSCCTTCEEEEEEEEECSSS
T ss_pred EEeCCCCcCCEEEEEEEEEeCCc
Confidence 67899999999999998764333
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.73 E-value=0.022 Score=45.05 Aligned_cols=74 Identities=11% Similarity=-0.053 Sum_probs=42.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.- .+.++++|.|....+.....-.|+|...++.... .... .++-....+|+|
T Consensus 8 ~P~~l~v~~-~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~-----~~~~---------------~~~~~t~~~i~~ 66 (95)
T d2fnba_ 8 QLTDLSFVD-ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI-----FEDF---------------VDSSVGYYTVTG 66 (95)
T ss_dssp CCTTCEEEC-CCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEE-----EEEE---------------CCSSCSEEEECC
T ss_pred cCCCeEEEE-EcCCEEEEEEEecCCceEEeEEEEEEEeeccceE-----EEEE---------------eCCCCeEEEEec
Confidence 455555432 2478999999765431112235666654332211 0000 012234567999
Q ss_pred CCCCCEEEEEEeeec
Q 007069 255 LWPNAMYTYKVGHRL 269 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~~ 269 (619)
|+||++|.++|..-.
T Consensus 67 L~p~t~Y~~~V~a~~ 81 (95)
T d2fnba_ 67 LEPGIDYDISVITLI 81 (95)
T ss_dssp CCTTSEEEEEEEEEE
T ss_pred ccCCEEEEEEEEEEe
Confidence 999999999998753
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.028 Score=43.90 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=43.9
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecC
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 254 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltg 254 (619)
+|..+++.- -+.++++|+|....+ ....-.|+|......... ..... ++-....+|+|
T Consensus 3 ~P~~l~v~~-vt~~sv~l~W~~p~~-~~~~Y~i~~~~~~~~~~~---~~~~v-----------------~~~~~~~~i~~ 60 (89)
T d1fnfa3 3 SPTGIDFSD-ITANSFTVHWIAPRA-TITGYRIRHHPEHFSGRP---REDRV-----------------PHSRNSITLTN 60 (89)
T ss_dssp CCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECSCCSSCC---EEEEE-----------------ETTCCEEEEES
T ss_pred cCcCCEEEE-ecCCEEEEEEEeCCC-EEeeEEEEEEECCCCCce---EEEEE-----------------CCCccEEEECC
Confidence 566555542 247999999987643 122345777765432211 01111 12234578999
Q ss_pred CCCCCEEEEEEeee
Q 007069 255 LWPNAMYTYKVGHR 268 (619)
Q Consensus 255 L~P~t~Y~Yrvg~~ 268 (619)
|+|++.|.++|..-
T Consensus 61 L~p~t~Y~~~V~a~ 74 (89)
T d1fnfa3 61 LTPGTEYVVSIVAL 74 (89)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CcccCEEEEEEEEE
Confidence 99999999999875
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.022 Score=45.79 Aligned_cols=88 Identities=14% Similarity=0.001 Sum_probs=47.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
|.+|..+.+.-. +.++++|+|....... -..-.++|.......+..... .......
T Consensus 3 p~pP~~p~~~~~-t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 61 (104)
T d1bpva_ 3 IDPPGKPVPLNI-TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF--------------------SNILENE 61 (104)
T ss_dssp CCCCCCCEEEEE-ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC--------------------SCCCSSE
T ss_pred CCCCCCCEEEEe-cCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe--------------------eccceeE
Confidence 456666654321 3579999998643211 112455665543322111100 0112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceEE
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQ 281 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~ 281 (619)
.+++||+|+|+|.|||......|. ..+|+...
T Consensus 62 ~~i~~L~p~t~Y~frV~A~n~~G~~s~~S~~s~ 94 (104)
T d1bpva_ 62 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSD 94 (104)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEECCCCCCCCcCCCC
Confidence 678999999999999997643342 23444433
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.013 Score=48.31 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=50.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 250 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 250 (619)
|.+|.-+++..+ .+++.|+|.-....+. ..-.|+|+..+.... ... ..+.....
T Consensus 21 P~~P~~~~~~~~--~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~-------~~~---------------~~~~~~~~ 76 (113)
T d1x5ia1 21 PEVPSSLHVRPL--VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ-------TIK---------------VDYKQRYY 76 (113)
T ss_dssp CCSCSEEEEEEE--TTEEEEEEECCSCTTBCCCEEEEEECSSCGGGE-------EEE---------------CCTTCCEE
T ss_pred CCCCEeeeeeeC--CCEEEEEEEccccCCccEEEEEEEeeeccccce-------eee---------------eeCCccEE
Confidence 567777776544 4789999986543110 112455543322111 100 01223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 286 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 286 (619)
+|.+|+|++.|.+||......|.... -.-+++|.|
T Consensus 77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~-~~~~~~T~P 111 (113)
T d1x5ia1 77 TIENLDPSSHYVITLKAFNNVGEGIP-LYESAVTRP 111 (113)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCC-CCCCEECCC
T ss_pred EEeccccCcEEEEEEEEECCCcCCCC-eeeEEEeCC
Confidence 79999999999999987643333221 134577766
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.41 E-value=0.026 Score=44.32 Aligned_cols=66 Identities=21% Similarity=0.270 Sum_probs=40.6
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEE
Q 007069 186 TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKV 265 (619)
Q Consensus 186 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrv 265 (619)
+.++++|.|..+.+ ....-.|+|...++.... ..... ++-...+.|+||+||++|.++|
T Consensus 9 t~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 9 TPTSLLISWDAPAV-TVRYYRITYGETGGNSPV---QEFTV-----------------PGSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp CSSCEEEECCCCSS-CCSEEEEEEEETTCCSCC---EEEEE-----------------ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCEEEEEEEccce-EecEEEEEEEcCCCCcee---EEEEe-----------------CCCccEEEeCCCCCCCEEEEEE
Confidence 47899999986543 223457777765433211 01111 1122467899999999999999
Q ss_pred eeecCCC
Q 007069 266 GHRLFNS 272 (619)
Q Consensus 266 g~~~~dg 272 (619)
..-...|
T Consensus 68 ~a~~~~g 74 (91)
T d1fnaa_ 68 YAVTGRG 74 (91)
T ss_dssp EEECTTC
T ss_pred EEEeCCc
Confidence 8764334
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.36 E-value=0.14 Score=49.01 Aligned_cols=193 Identities=15% Similarity=0.091 Sum_probs=103.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccch-HHHHHHHHHhcCCCCEEEEcCcccccCCc---hhHHHHHHHhhhhhhcCCC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYAS-LNTTRQLIQDLKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVP 368 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s-~~~~~~i~~~~~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP 368 (619)
..|++++||.=.. -.... ...+.++.++ .++||||..|-++ ++|. ....+++++. .+-
T Consensus 4 ~MkILfiGDIvG~----------~GR~~v~~~Lp~Lr~~-~~iDfVIaNgENa-a~G~Git~k~~~eL~~~------GvD 65 (281)
T d1t71a_ 4 SIKFIFLGDVYGK----------AGRNIIKNNLAQLKSK-YQADLVIVNAENT-THGKGLSLKHYEFLKEA------GVN 65 (281)
T ss_dssp CCEEEEECEEBHH----------HHHHHHHTTHHHHHHH-HTCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCC
T ss_pred cceEEEEEccCCH----------HHHHHHHHHhHHHHHH-hCCCEEEECCccC-CCCcCCCHHHHHHHHHh------CCc
Confidence 4899999997211 01111 1223344443 5799999999999 5554 2333333322 344
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccceeeec----cCCCCCceEEEEEeCCEEEEEEeCC--CCCCC--CHHH
Q 007069 369 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV----PAENRAKFWYSTDYGMFRFCVADTE--HDWRE--GTEQ 440 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~----P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~--~~~Q 440 (619)
+ .+.|||=++..+.-.+....+ . .-.-.++ |....++-|..++.++.++.+++-. ....+ -...
T Consensus 66 v-IT~GNH~wd~kei~~~i~~~~---~----llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~p 137 (281)
T d1t71a_ 66 Y-ITMGNHTWFQKLDLAVVINKK---D----LVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP 137 (281)
T ss_dssp E-EECCTTTTCCGGGHHHHTTCT---T----EECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH
T ss_pred E-EEcCchhhhchhhHHHHhhcc---c----ccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHH
Confidence 4 589999876432211111000 0 0011122 3334566788888877666666543 22111 1222
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccce
Q 007069 441 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI 520 (619)
Q Consensus 441 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~ 520 (619)
..-+++.+.+ .+.+.+||=+|.=- + .|. .=.-.+-+-+|.+|+-=|+|.--- +.+
T Consensus 138 f~~~~~~~~~---~~~d~i~VDfHaEA--T-----------SEK----~A~g~~lDGrvsaVvGTHTHV~Ta-----D~r 192 (281)
T d1t71a_ 138 FKVLKELILK---RDCDLHIVDFHAET--T-----------SEK----NAFCMAFDGYVTTIFGTHTHVPSA-----DLR 192 (281)
T ss_dssp HHHHHHHHTT---CCCSEEEEEEECSC--H-----------HHH----HHHHHHHTTTSSEEEEESSSSCCT-----TCE
T ss_pred HHHHHHhhcc---cCCCeEEEEeccch--h-----------hhh----hhheeeeCCcEEEEEecCcccccC-----ccc
Confidence 3334444443 46677888888532 0 121 223345577899999999998321 222
Q ss_pred eccCCCccccCCCCceEEEE-eCCCCC
Q 007069 521 CTNKEKNYYKGTLNGTIHVV-AGGGGA 546 (619)
Q Consensus 521 ~~~~~~~~y~~~~~g~vyiv-~G~gG~ 546 (619)
+ -++||-|++ .|+.|.
T Consensus 193 I----------Lp~GTAyiTDvGMtG~ 209 (281)
T d1t71a_ 193 I----------TPKGSAYITDVGMCGP 209 (281)
T ss_dssp E----------CTTSCEEESCCCEEBC
T ss_pred c----------ccCCeEEEecCccccC
Confidence 2 146888877 777775
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.33 E-value=0.013 Score=47.04 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=46.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCC------ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEA------EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 246 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 246 (619)
|.+|.-+.+....+.+.+.|.|..+...... .-.|+|...+...+... ..
T Consensus 2 PdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~----~~-------------------- 57 (94)
T d3d85d3 2 PDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR----VF-------------------- 57 (94)
T ss_dssp CCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE----EE--------------------
T ss_pred CCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEe----cc--------------------
Confidence 6788888887766667899999987532111 23566654433322110 00
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY 280 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~ 280 (619)
...++..|.|++.|.+||......+.+.||+.-
T Consensus 58 -~~~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeWS 90 (94)
T d3d85d3 58 -TDKTSATVICRKNASISVRAQDRYYSSSWSEWA 90 (94)
T ss_dssp -ESSSEEEECCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred -ccceEEEecCCCCEEEEEEEecCCCCCCCccCc
Confidence 001123588999999999987655556677753
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.10 E-value=0.027 Score=44.46 Aligned_cols=77 Identities=12% Similarity=0.129 Sum_probs=43.5
Q ss_pred CCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEE
Q 007069 186 TWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTY 263 (619)
Q Consensus 186 ~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Y 263 (619)
..++++|+|.-+..... ..-.|+|...+...+. ...+. .-....+|+||+|++.|.+
T Consensus 12 ~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~L~p~t~Y~~ 70 (94)
T d2dn7a1 12 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPN----TIDFG-----------------KDDQHFTVTGLHKGTTYIF 70 (94)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCE----EEEEE-----------------TTCCEEEEECCCTTCEEEE
T ss_pred eCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcE----EEEcC-----------------CCccEEEEEccCCeeEEEE
Confidence 46899999997643211 1234666654433221 11111 1123456899999999999
Q ss_pred EEeeecCCCCccccceEEEEc
Q 007069 264 KVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 264 rvg~~~~dg~~~~S~~~~F~T 284 (619)
||......|...+|+ ..+.|
T Consensus 71 ~V~A~n~~G~g~~s~-~~~~T 90 (94)
T d2dn7a1 71 RLAAKNRAGLGEEFE-KEIRT 90 (94)
T ss_dssp EEEEEETTEEEEEEE-EEEEC
T ss_pred EEEEEcCCcCCCCcc-EEEee
Confidence 998764444333343 34455
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.07 E-value=0.0049 Score=51.60 Aligned_cols=94 Identities=12% Similarity=0.031 Sum_probs=57.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCC----CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYG----INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 248 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 248 (619)
|.+|..+.+......++|.|+|.-... .......+.|....+.... .... . -.+-..
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~-----~~~~--~------------~~~~~~ 71 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRV-----AEVI--F------------PTADST 71 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEE-----EEEC--C------------TTCSEE
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccc-----eeee--e------------ecccee
Confidence 456776766554557899999985321 1123456778653221110 0000 0 012345
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 249 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 249 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
.++|+||+|++.|.+||......|...+|+.-.++|.
T Consensus 72 ~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t~ 108 (117)
T d2cspa1 72 AVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPE 108 (117)
T ss_dssp EEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCHH
T ss_pred eeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeCC
Confidence 6789999999999999987766666667777666653
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.03 E-value=0.019 Score=45.94 Aligned_cols=78 Identities=22% Similarity=0.217 Sum_probs=39.9
Q ss_pred eecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCC
Q 007069 181 LAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWP 257 (619)
Q Consensus 181 La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P 257 (619)
|....+.+++.|+|..+...... .-.|+|....+.... . ...+ .+-....+|.+|+|
T Consensus 11 l~v~~~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~-~-~~~~------------------~~~~~~~~l~~L~p 70 (100)
T d2gysa4 11 LQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKD-S-KTET------------------LQNAHSMALPALEP 70 (100)
T ss_dssp EEEC---CCCEEEEEC--------CEEEEEEEECSSSCSTT-S-CEEE------------------EESCSEEECCCCCS
T ss_pred cEEEECCCEEEEEEecCcccCCccceEEEEEEeecccceec-e-eecc------------------cCCceEEEeCCCCC
Confidence 44555567899999877542111 245566543322111 0 0011 01124678999999
Q ss_pred CCEEEEEEeeecCCC--Cccccc
Q 007069 258 NAMYTYKVGHRLFNS--TYIWSS 278 (619)
Q Consensus 258 ~t~Y~Yrvg~~~~dg--~~~~S~ 278 (619)
|++|.+||.....+| .+.||+
T Consensus 71 ~t~Y~~rVRa~~~~g~~~g~WSe 93 (100)
T d2gysa4 71 STRYWARVRVRTSRTGYNGIWSE 93 (100)
T ss_dssp SCCCEEEEEEEECCTTCCBCCCC
T ss_pred CCeEEEEEEEEECCCCCCCCccC
Confidence 999999998764333 234554
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.03 E-value=0.066 Score=43.17 Aligned_cols=84 Identities=15% Similarity=0.038 Sum_probs=45.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
|.+|..+..-.....++|+++|.-+.+.. +..-.+.|............ ..... .. ..........
T Consensus 5 P~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~-~~~~~-----~~-------~~~~~~~~~~ 71 (107)
T d1cd9b1 5 PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGD-TIPDC-----VA-------KKRQNNCSIP 71 (107)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCC-EEEEE-----EC-------CTTCCEEEEE
T ss_pred cCCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeee-eeeee-----cc-------ccCccccEEE
Confidence 44555554212234689999998765422 12335566544322111100 00000 00 1123566788
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007069 252 LKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~ 269 (619)
+++|+|++.|.+||....
T Consensus 72 ~~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 72 RKNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp GGGCCTTSCEEEEEEEEE
T ss_pred cCCCCcCceEEEEEEEEe
Confidence 999999999999998763
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.69 E-value=0.038 Score=44.64 Aligned_cols=85 Identities=15% Similarity=0.055 Sum_probs=46.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 172 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 172 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
-|.+|..+++.- .+.+++.|.|......+. ..-.|+|...+.... ..... .++-...
T Consensus 10 vP~~p~~l~~~~-~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~---~~~~~-----------------~~~~~~~ 68 (106)
T d1wfna1 10 VPGPVGHLSFSE-ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHY-----------------LPNVTLE 68 (106)
T ss_dssp SCCCCSCCEEES-CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEE-----------------ECSSCCE
T ss_pred CCcCCCCcEEEE-ecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcc---eEEEe-----------------cCCCeeE
Confidence 356676666532 246899999986543210 123355544322110 00011 0122345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCcccc
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWS 277 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S 277 (619)
.+|+||+|+++|.++|......|.+.+|
T Consensus 69 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 96 (106)
T d1wfna1 69 YRVTGLTALTTYTIEVAAMTSKGQGQVS 96 (106)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEE
T ss_pred EEEccCCCCCEEEEEEEEECCCCCcCCc
Confidence 6789999999999999865434433333
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.80 E-value=0.13 Score=42.09 Aligned_cols=35 Identities=11% Similarity=-0.148 Sum_probs=26.6
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 251 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
.+.+|+|+++|.+||......|...+|+...+.+.
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~ 109 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRI 109 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEecc
Confidence 45689999999999997655666678877666443
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=92.79 E-value=0.11 Score=41.65 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=42.7
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEE
Q 007069 174 NAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 174 ~~P~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
.+|..+++.. .+.++++|+|....... -..-.|+|...+...... .... ..+....
T Consensus 6 ~~P~~v~~~~-~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~---~~~~----------------~~~~~~~ 65 (105)
T d1cfba2 6 KNPDNVVGQG-TEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWE---NNNI----------------FDWRQNN 65 (105)
T ss_dssp CCCSCCEEEC-SSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCE---EEEE----------------CCTTCCE
T ss_pred CCCcCeEEEE-ccCCeEEEEEeCCChhhcCceEEEEEEEeeeecccccee---EEEe----------------cCCCccE
Confidence 3566666543 34789999997422110 112346665443221100 0010 1223456
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007069 250 SFLKELWPNAMYTYKVGHRL 269 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~ 269 (619)
.+|++|+|++.|.++|....
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 66 IVIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp EEECSCCSSCEEEEEEEEEE
T ss_pred EEECCCCCCCEEEEEEEEEe
Confidence 78999999999999998764
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.70 E-value=0.01 Score=48.12 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=54.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
+..|..+..... +.+++.|+|..+.. .....+.|...=..... .....+.. ....+..+...|
T Consensus 5 ~d~P~~v~~~~~-~~~sv~l~W~pP~~--~ng~i~~Y~v~y~~~~~--~~~~~~~~------------~~~~~~~~~~~~ 67 (102)
T d2dtge1 5 DDIVGPVTHEIF-ENNVVHLMWQEPKE--PNGLIVLYEVSYRRYGD--EELHLCDT------------RKHFALERGCRL 67 (102)
T ss_dssp CCCCCCCCCCSS-SSSCCCCCCCCCCS--CSSCEEEECCCCBSSSB--CCCCCCCC------------SSSCCCTTCCCC
T ss_pred CCCCCCCEEEEE-CCCEEEEEEEeCCC--CcceEEEeeeEEEecCC--CCceeeee------------eecccceEEEEE
Confidence 345555544332 36899999986543 23356777542110000 00000000 011233456778
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007069 253 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 285 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 285 (619)
.+|+|++ |.+||......|.+.||+...|.|+
T Consensus 68 ~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 68 RGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CSCCSSE-ECCCCCEEETTBCCCCCCCCEECCC
T ss_pred eccceee-EEEEEEEEcCCccCCCCCCEEEEcc
Confidence 9999985 9999987655666778998899884
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.55 E-value=0.062 Score=44.64 Aligned_cols=41 Identities=15% Similarity=-0.033 Sum_probs=28.6
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC-----ccccceEEEEcC
Q 007069 245 GYIHTSFLKELWPNAMYTYKVGHRLFNST-----YIWSSEYQFKAS 285 (619)
Q Consensus 245 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-----~~~S~~~~F~T~ 285 (619)
+.....+|+||+|+|+|.++|..-...|. +..|+...|+|.
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred CccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 44567789999999999999986433332 235666666663
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.52 E-value=0.13 Score=40.52 Aligned_cols=37 Identities=11% Similarity=-0.051 Sum_probs=27.0
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF 282 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 282 (619)
......+++|.|++.|++||......|...|++.-.|
T Consensus 55 ~~~~~~~~~l~~~~~Y~fRV~A~n~~g~S~ws~s~~f 91 (98)
T d1fyhb1 55 HYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEF 91 (98)
T ss_dssp SEEECGGGCCSTTSCEEEEEEEEETTEECCCEECCCB
T ss_pred ceeeeEecccCCCCEEEEEEEEEcCCcccCCccCCCc
Confidence 4456678999999999999998754555566655444
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.56 E-value=0.34 Score=37.80 Aligned_cols=75 Identities=9% Similarity=-0.034 Sum_probs=41.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
|.+|.-+++..- +.++|+++|.-+.+.. ...-.|+|...++.... .... + .+--...+
T Consensus 4 P~~P~n~~~~~~-~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~-----~~~~--------~-------~~~~~~~~ 62 (95)
T d1bqua1 4 PEKPKNLSCIVN-EGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----CKAK--------R-------DTPTSCTV 62 (95)
T ss_dssp CCCCEEEEEEEE-TTSCCEEEEECCSCCSSCCEEEEEEEETTEECCC-----EECC--------S-------SCTTEEEC
T ss_pred cCCCeeeEEEEc-cCCEEEEEEeCcccCCCceEEEEEEEEcccceeE-----eecc--------c-------ccceeeee
Confidence 455666665433 4688999998875431 12345555543221110 0000 0 01112235
Q ss_pred ecCCCCCCEEEEEEeee
Q 007069 252 LKELWPNAMYTYKVGHR 268 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~ 268 (619)
+.+|+|++.|++||...
T Consensus 63 ~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 63 DYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp SSCCCTTSCEEEEEEEE
T ss_pred eeecCCCcEEEEEEEEE
Confidence 68999999999999876
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.38 E-value=0.37 Score=47.17 Aligned_cols=68 Identities=16% Similarity=0.204 Sum_probs=40.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC-C--CEEEEcCcccccCCchhHHHHHHHhh-hhhhcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN-I--DIVFHIGDICYANGYISQWDQFTAQI-EPIASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~-p--DfVl~~GDi~y~~g~~~~wd~f~~~i-~~l~~~vP~~ 370 (619)
.+.++||+|.. ...+.++.+...- + .-.+++||+++ +|..+ .+-..-.+ -.+.-.--++
T Consensus 61 pv~VvGDiHGq---------------~~DL~~if~~~g~p~~~~~ylFLGDYVD-RG~~s-lEvi~lL~~lKi~yP~~v~ 123 (324)
T d1s95a_ 61 KITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RGSFS-VEVILTLFGFKLLYPDHFH 123 (324)
T ss_dssp EEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SSTTH-HHHHHHHHHHHHHSTTTEE
T ss_pred CEEEEEECCCC---------------HHHHHHHHHHCCCCCCCCeEEEeccccc-CcCcc-eeehHHHHHHHHhCCCcEE
Confidence 58999999854 3345566654322 2 24789999994 45432 22221111 1122344689
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
...||||..
T Consensus 124 LLRGNHE~~ 132 (324)
T d1s95a_ 124 LLRGNHETD 132 (324)
T ss_dssp EECCTTSSH
T ss_pred eccCCcccc
Confidence 999999964
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.07 E-value=0.41 Score=46.11 Aligned_cols=24 Identities=8% Similarity=0.105 Sum_probs=20.9
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
+.+.++..++++++++++=||.=.
T Consensus 216 g~~~~~~Fl~~n~l~~IIR~He~~ 239 (288)
T d3c5wc1 216 GQDISETFNHANGLTLVSRAHQLV 239 (288)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCC
T ss_pred CHHHHHHHHHHCCCcEEEcCCCcC
Confidence 477899999999999999998743
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=88.50 E-value=0.5 Score=45.56 Aligned_cols=67 Identities=19% Similarity=0.228 Sum_probs=39.9
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhh-hhhhcCCCeEEc
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQI-EPIASTVPYMIA 372 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i-~~l~~~vP~~~v 372 (619)
+.++||+|.. ...+.++.+.. +.-.-.+++||.++ +|..+ .+-..-.+ -.+.-.--++..
T Consensus 54 v~VvGDiHG~---------------~~DL~~if~~~g~p~~~~ylFLGDYVD-RG~~s-lE~i~lL~aLKi~~P~~v~lL 116 (294)
T d1jk7a_ 54 LKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGKQS-LETICLLLAYKIKYPENFFLL 116 (294)
T ss_dssp EEEECBCTTC---------------HHHHHHHHHHHCCTTSSCEEECSCCSS-SSSCH-HHHHHHHHHHHHHSTTTEEEC
T ss_pred eEEEEECCCC---------------hHhHHHHHhhcCCCccceEEeeccccC-CCccc-hHHHHHHHHHHhhCCCeEEEe
Confidence 7999999854 23455566542 22345788999994 55432 22211111 112334568999
Q ss_pred cCCCccC
Q 007069 373 SGNHERD 379 (619)
Q Consensus 373 ~GNHD~~ 379 (619)
.||||..
T Consensus 117 RGNHE~~ 123 (294)
T d1jk7a_ 117 RGNHECA 123 (294)
T ss_dssp CCTTSSH
T ss_pred cCCcccc
Confidence 9999964
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.46 E-value=0.77 Score=46.96 Aligned_cols=26 Identities=8% Similarity=0.024 Sum_probs=22.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCcccce
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
+.+++...+++++.++++=||.=.-+
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~ 273 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDA 273 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchhh
Confidence 46899999999999999999986543
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.38 E-value=0.48 Score=40.55 Aligned_cols=39 Identities=8% Similarity=-0.004 Sum_probs=28.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCC
Q 007069 248 HTSFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASP 286 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p 286 (619)
...+|+||+|+|.|.++|.....+|... .+....|+|.|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 4677999999999999998654333332 24567788876
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.39 E-value=0.65 Score=36.70 Aligned_cols=86 Identities=16% Similarity=0.106 Sum_probs=48.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEec
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 253 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~lt 253 (619)
+|..++|...+ ..++|.|.-+.+.. ...-.|||...+...+..... |.. ...--....+.
T Consensus 6 ~P~nv~~~s~n--~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~---------c~~--------~t~~~~~~~~~ 66 (99)
T d1y6kr1 6 SPPSVWFEAEF--FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQ---------CSQ--------TLSYDLTAVTL 66 (99)
T ss_dssp CCSCEEEEEET--TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEE---------EES--------SSEEECGGGGT
T ss_pred CCCcceEEEEC--CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEe---------ecc--------ccccceeeeee
Confidence 46677765443 57999997543311 123578887654444332111 100 00001112367
Q ss_pred CCCCCCEEEEEEeeecCCCCccccce
Q 007069 254 ELWPNAMYTYKVGHRLFNSTYIWSSE 279 (619)
Q Consensus 254 gL~P~t~Y~Yrvg~~~~dg~~~~S~~ 279 (619)
+|.++..|++||......|...|++.
T Consensus 67 ~l~~~~~Y~fRVrA~n~~g~S~Ws~t 92 (99)
T d1y6kr1 67 DLYHSNGYRARVRAVDGSRHSQWTVT 92 (99)
T ss_dssp TGGGSSCEEEEEEEEETTEECCCEEC
T ss_pred ecCCCCEEEEEEEEEcCCCcCCCccc
Confidence 89999999999998765566667653
|