Citrus Sinensis ID: 007093

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------62

MALNLRQKQTECITRMLNLNQPVNATGTANEEVYKILIYDRFCQNILSPLIHVKDLRKHGVTLYFLIDKDRKPVHDVPAVYFVQASQQNIQRIIADASASLYDSFHLNFSSSIPRALLEDLASGMLNSDSIQRISKVHDQYLDFVTLEDNLFSLAQKSSYVQLNDPKAGDREIEEIIERIVNGLFCVLATLGVVPIIRCPRSGPAEMVASALDQKLRDHLLSKNNLFSEGGNFASSFQRPILCIFDRNFELSVGIQHDFRYRPLVHDVLGLKLNRLSVQGEKGGMKSFELDSADPFWVANGWLEFPEVAVEIETQLNKYKKDVEEVNKRTGGNDGAEFDGTDLIGNTKHLMNAVNSLPELTERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGKGSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKSLNVSLASANSASRNNIVDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQKMGLGNTVAPSTH

ccccHHHHHHHHHHHHHccccccccccccccccEEEEEEEccccccccccccHHHHHHcccEEEEEccccccccccccEEEEEcccHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHccccccccccccEEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccccccccccHHHHHHHHHcccccEEEEcccccccEEEEcccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcHHHHHHHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccHHHHHHHccccccHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHccccccccccccccc

*ALNLRQKQTECITRMLNLNQPVNATGTANEEVYKILIYDRFCQNILSPLIHVKDLRKHGVTLYFLIDKDRKPVHDVPAVYFVQASQQNIQRIIADASASLYDSFHLNFSSSIPRALLEDLASGMLNSDSIQRISKVHDQYLDFVTLEDNLFSLAQKSSYVQLNDPKAGDREIEEIIERIVNGLFCVLATLGVVPIIRCPRSGPAEMVASALDQKLRDHLLSKNN**********SFQRPILCIFDRNFELSVGIQHDFRYRPLVHDVLGLKLNRLSVQGEKGGMKSFELDSADPFWVANGWLEFPEVAVEIETQLNKYKK********************DLIGNTKHLMNAVNSLPELTERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGKGSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKSLNVSL*********NIVDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVE*****************************PFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLG**************

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MALNLRQKQTECITRMLNLNQPVNATGTANEEVYKILIYDRFCQNILSPLIHVKDLRKHGVTLYFLIDKDRKPVHDVPAVYFVQASQQNIQRIIADASASLYDSFHLNFSSSIPRALLEDLASGMLNSDSIQRISKVHDQYLDFVTLEDNLFSLAQKSSYVQLNDPKAGDREIEEIIERIVNGLFCVLATLGVVPIIRCPRSGPAEMVASALDQKLRDHLLSKNNLFSEGGNFASSFQRPILCIFDRNFELSVGIQHDFRYRPLVHDVLGLKLNRLSVQGEKGGMKSFELDSADPFWVANGWLEFPEVxxxxxxxxxxxxxxxxxxxxxTGGNDGAEFDGTDLIGNTKHLMNAVNSLPELTERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGKGSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKSLNVSLASANSASRNNIVDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQKMGLGNTVAPSTH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
SEC1 family transport protein SLY1	May be involved in the early secretory pathway.	confident	Q9SL48
SEC1 family transport protein SLY1	May be involved in the early secretory pathway.	probable	Q851W1
Protein SLY1	Able to suppress the functional loss of YPT1. SLY1 is essential for cell viability. May interact indirectly, or directly with YPT1.	probable	P22213

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1MQS, chain A
Confidence level:very confident
Coverage over the Query: 2-224,238-330,352-609
View the alignment between query and template
View the model in PyMOL