Citrus Sinensis ID: 007275
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 609 | 2.2.26 [Sep-21-2011] | |||||||
| Q9CMJ6 | 440 | Amino-acid acetyltransfer | yes | no | 0.697 | 0.965 | 0.305 | 6e-59 | |
| P59099 | 442 | Amino-acid acetyltransfer | yes | no | 0.715 | 0.986 | 0.322 | 5e-58 | |
| A6VDY0 | 432 | Amino-acid acetyltransfer | yes | no | 0.696 | 0.981 | 0.322 | 1e-55 | |
| P22567 | 432 | Amino-acid acetyltransfer | yes | no | 0.696 | 0.981 | 0.322 | 1e-55 | |
| Q02EG0 | 432 | Amino-acid acetyltransfer | yes | no | 0.696 | 0.981 | 0.322 | 1e-55 | |
| B7V594 | 432 | Amino-acid acetyltransfer | yes | no | 0.696 | 0.981 | 0.322 | 1e-55 | |
| Q4ZZU5 | 432 | Amino-acid acetyltransfer | yes | no | 0.694 | 0.979 | 0.309 | 3e-54 | |
| P61919 | 432 | Amino-acid acetyltransfer | N/A | no | 0.694 | 0.979 | 0.309 | 3e-54 | |
| B0KP70 | 432 | Amino-acid acetyltransfer | yes | no | 0.691 | 0.974 | 0.314 | 4e-54 | |
| P0A100 | 432 | Amino-acid acetyltransfer | yes | no | 0.691 | 0.974 | 0.314 | 4e-54 |
| >sp|Q9CMJ6|ARGA_PASMU Amino-acid acetyltransferase OS=Pasteurella multocida (strain Pm70) GN=argA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 249/520 (47%), Gaps = 95/520 (18%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V WFR++ PY+ HRG TFV+++ G+ ++ P I+ DI+ LH LGI+ VLV G
Sbjct: 5 ELVHWFRQSTPYVNMHRGKTFVIMLDGDTIACPNFVNIINDISLLHSLGIKLVLVFGARY 64
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QI++LL + E+ Y RITD SL +A G + I ++LS P
Sbjct: 65 QINELLQQHQIESVYHKNIRITDLTSLELVKQAVGKLNYDIASRLSLRLP---------- 114
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
H + V SGNF+ A+ G VD G + Y
Sbjct: 115 ---HSPLIDVVSGNFVLAQPIG----VDDG---------------------------IDY 140
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ--R 319
SG++ NT + + D+ ++ GPI A S+ +
Sbjct: 141 QLSGKIRRINTESIQQ------QLDRDAIVLIGPI---------------APSVTGESFN 179
Query: 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGL 379
+ EIA+ + E + F + I +N +T S+ L
Sbjct: 180 LPFEEIASQLAIKLKAEKLIGFSATQGI----LDENNQTISD-----------------L 218
Query: 380 WSSEQGFAIGGQERLSRLNGYLSE----LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
+ + +L + N Y S L AA CR G++R HL+ G LL ELF
Sbjct: 219 LPQDAELYLA---KLIQQNQYHSSQARFLQAAIEACRFGIKRSHLISYEEDGSLLQELFT 275
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER 495
RDG+GT ++ + E R A V+D+ + ++I+PL + G LV+R+ E+L ++ + +++R
Sbjct: 276 RDGVGTQLSMEHSETIRLATVSDIPALLELIRPLEQQGILVKRSREQLEMEINQYTIIDR 335
Query: 496 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT 555
+G IIACAAL + EK E+A + V P+ R +GD LL+ I+K+A LG++ LF+LTT
Sbjct: 336 DGVIIACAALNCYADEKMAEMACVAVHPDYRNSSRGDILLEAIQKRAKQLGIEKLFVLTT 395
Query: 556 RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
RT WF+ RGF+ I +P+++R+ N R SK ++ L
Sbjct: 396 RTVHWFQERGFQLAEIADLPDKKRQHYNYQRRSKILIQAL 435
|
Pasteurella multocida (strain Pm70) (taxid: 272843) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|P59099|ARGA_BUCAP Amino-acid acetyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 239/515 (46%), Gaps = 79/515 (15%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V+ FR + PY+ AHRG FV+++SGE + I+ DI LH LGIR ++V G+
Sbjct: 7 ELVQGFRHSVPYINAHRGKKFVIMLSGEAIKYGNFSGIINDIGLLHSLGIRLIVVYGSCP 66
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QI+ L E+ + Y R+TD SL +AAG +++ I A+LS + N G
Sbjct: 67 QINANLKEKNIKITYHKYIRVTDLLSLEQVKQAAGRLQLDITARLSMS--LSNTPLQG-- 122
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
++V SGNF+ A+ G VD G + Y
Sbjct: 123 -----ANINVVSGNFIIAQPLG----VDDG---------------------------IDY 146
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVK 321
SG + + + A C L A LI + + ES +L
Sbjct: 147 CHSGRIRRID--KKAINCQLENGAIVLIGPVAVSVTGESFNL-----------------T 187
Query: 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWS 381
EIA + E + F S V SQ GKT SE N + G G +
Sbjct: 188 SEEIATQVSIKLKAEKMIGFC---SKQGVIDSQ-GKTISELLPNNIQNEIKKLEGKGDYI 243
Query: 382 SEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGT 441
S + L + C+ GV R HL+ G LL ELF RDG+GT
Sbjct: 244 SST----------------IRFLRGSIKACKSGVNRSHLISYHKNGALLQELFSRDGIGT 287
Query: 442 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 501
+ + E R A + D+ GI ++I+PL + G LVRR+ E+L +D F ++ER+ IA
Sbjct: 288 QMVMESAEKIRQANINDIGGILELIRPLEKKGILVRRSREQLEMEVDKFTIIERDNLTIA 347
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 561
CAAL+PFFKEK GE+A + V P+ R +GD LL ++ A L L +F+LTT++ WF
Sbjct: 348 CAALYPFFKEKIGEMACVAVHPDYRNSSRGDLLLQTMKLNAKKLNLKKIFVLTTQSIHWF 407
Query: 562 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596
+ RGF +E++PE ++K N R SK M L
Sbjct: 408 QERGFILVDVEILPESKKKMYNYQRCSKILMIDLF 442
|
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|A6VDY0|ARGA_PSEA7 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 252/518 (48%), Gaps = 94/518 (18%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557
P + GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRT
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRT 394
Query: 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
A WF+ RGF+ S+E +P R N RNS+ + K L
Sbjct: 395 AHWFRERGFQPSSVERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain PA7) (taxid: 381754) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P22567|ARGA_PSEAE Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=argA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 252/518 (48%), Gaps = 94/518 (18%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557
P + GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRT
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRT 394
Query: 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
A WF+ RGF+ S+E +P R N RNS+ + K L
Sbjct: 395 AHWFRERGFQPSSVERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q02EG0|ARGA_PSEAB Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 252/518 (48%), Gaps = 94/518 (18%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557
P + GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRT
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRT 394
Query: 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
A WF+ RGF+ S+E +P R N RNS+ + K L
Sbjct: 395 AHWFRERGFQPSSVERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain UCBPP-PA14) (taxid: 208963) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B7V594|ARGA_PSEA8 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 252/518 (48%), Gaps = 94/518 (18%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557
P + GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRT
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRT 394
Query: 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
A WF+ RGF+ S+E +P R N RNS+ + K L
Sbjct: 395 AHWFRERGFQPSSVERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain LESB58) (taxid: 557722) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q4ZZU5|ARGA_PSEU2 Amino-acid acetyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 253/521 (48%), Gaps = 98/521 (18%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDLRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++GVDY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGVDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIR 317
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ + ++
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPAHLQ 230
Query: 318 QRVKQSEIAANY-VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNG 376
+ + ANY + + C G V ++NG +E
Sbjct: 231 R------LGANYQAELLDAAAEACRGGVARSHIVSYAENGALLTE--------------- 269
Query: 377 NGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVL-LLELFK 435
L++ + G + QE+ EL A + +GG++ L+ +
Sbjct: 270 --LFTRDGGGTLVAQEQF--------ELVREAAI------------EDVGGLMDLITPLE 307
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
G+ + ++ E ++T S +++ E L+ A + Y + +
Sbjct: 308 EQGILVRRSREVLE----REITQFSVVER----------------EGLIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
E +AC A V+PE R G+GD+LL+ IE +A +LG+ LF+LT
Sbjct: 348 SESGELACLA----------------VNPEYRHGGRGDELLERIENRARALGIKTLFVLT 391
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
TRTA WF+ RGF S++ +P R N RNSK + K +
Sbjct: 392 TRTAHWFRERGFEPSSVDRLPSARASLYNYQRNSKIFEKAI 432
|
Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P61919|ARGA_PSESY Amino-acid acetyltransferase OS=Pseudomonas syringae pv. syringae GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 253/521 (48%), Gaps = 98/521 (18%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDLRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++GVDY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGVDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIR 317
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ + ++
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPAHLQ 230
Query: 318 QRVKQSEIAANY-VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNG 376
+ + ANY + + C G V ++NG +E
Sbjct: 231 R------LGANYQAELLDAAAEACRGGVARSHIVSYAENGALLTE--------------- 269
Query: 377 NGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVL-LLELFK 435
L++ + G + QE+ EL A + +GG++ L+ +
Sbjct: 270 --LFTRDGGGTLVAQEQF--------ELVREAAI------------EDVGGLMDLITPLE 307
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
G+ + ++ E ++T S +++ E L+ A + Y + +
Sbjct: 308 EQGILVRRSREVLE----REITQFSVVER----------------EGLIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
E +AC A V+PE R G+GD+LL+ IE +A +LG+ LF+LT
Sbjct: 348 SESGELACLA----------------VNPEYRHGGRGDELLERIENRARALGIKTLFVLT 391
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
TRTA WF+ RGF S++ +P R N RNSK + K +
Sbjct: 392 TRTAHWFRERGFEPSSVDRLPSARASLYNYQRNSKIFEKAI 432
|
Pseudomonas syringae pv. syringae (taxid: 321) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B0KP70|ARGA_PSEPG Amino-acid acetyltransferase OS=Pseudomonas putida (strain GB-1) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 244/521 (46%), Gaps = 100/521 (19%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGKLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREASIEDVGGLLELISPLEEQGILVRRS--------------------- 316
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
+++++ +E ++V R E ++ A + Y + +
Sbjct: 317 ---------------------------REVLEREIEQFSVVER--EGMIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
E +AC A V+PE R G+GD+LL+ IE +A +GL+ LF+LT
Sbjct: 348 SEAGELACLA----------------VNPEYRHGGRGDELLERIESRARQMGLNTLFVLT 391
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
TRTA WF+ RGF +E +P R N RNSK + K L
Sbjct: 392 TRTAHWFRERGFAPSGVERLPAARASLYNYQRNSKIFEKAL 432
|
Pseudomonas putida (strain GB-1) (taxid: 76869) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A100|ARGA_PSEPU Amino-acid acetyltransferase OS=Pseudomonas putida GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 243/521 (46%), Gaps = 100/521 (19%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGRLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREATIEDVGGLLELISPLEEQGILVRRS--------------------- 316
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
+++++ +E ++V R E ++ A + Y + +
Sbjct: 317 ---------------------------REVLEREIEQFSVVER--EGMIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
E +AC A V+PE R G+GD+LL+ IE +A +GL LF+LT
Sbjct: 348 SEAGELACLA----------------VNPEYRHGGRGDELLERIESRARQMGLSTLFVLT 391
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
TRTA WF+ RGF +E +P R N RNSK + K L
Sbjct: 392 TRTAHWFRERGFAPSGVERLPAARASLYNYQRNSKIFEKPL 432
|
Pseudomonas putida (taxid: 303) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 609 | ||||||
| 224095037 | 560 | predicted protein [Populus trichocarpa] | 0.903 | 0.982 | 0.818 | 0.0 | |
| 356565491 | 565 | PREDICTED: amino-acid acetyltransferase- | 0.899 | 0.969 | 0.785 | 0.0 | |
| 356540624 | 607 | PREDICTED: amino-acid acetyltransferase- | 0.965 | 0.968 | 0.736 | 0.0 | |
| 356514348 | 617 | PREDICTED: LOW QUALITY PROTEIN: amino-ac | 0.899 | 0.888 | 0.760 | 0.0 | |
| 255568615 | 705 | N-acetyltransferase, putative [Ricinus c | 0.871 | 0.753 | 0.763 | 0.0 | |
| 356496999 | 605 | PREDICTED: amino-acid acetyltransferase- | 0.862 | 0.867 | 0.792 | 0.0 | |
| 297821519 | 609 | hypothetical protein ARALYDRAFT_481154 [ | 0.898 | 0.898 | 0.747 | 0.0 | |
| 297798106 | 611 | hypothetical protein ARALYDRAFT_490852 [ | 0.981 | 0.978 | 0.705 | 0.0 | |
| 30681866 | 609 | amino-acid N-acetyltransferase [Arabidop | 0.898 | 0.898 | 0.744 | 0.0 | |
| 42573209 | 613 | N-acetyl-l-glutamate synthase 2 [Arabido | 0.975 | 0.969 | 0.701 | 0.0 |
| >gi|224095037|ref|XP_002310336.1| predicted protein [Populus trichocarpa] gi|222853239|gb|EEE90786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/556 (81%), Positives = 500/556 (89%), Gaps = 6/556 (1%)
Query: 53 KERNLSKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ + S+ KVF EA G++EE YN VED+QFVKWFREAWPYLWAHRG TFVVIISGE VS
Sbjct: 10 RTNSTSRRKVFGEAESGSIEEGYNSVEDKQFVKWFREAWPYLWAHRGSTFVVIISGETVS 69
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP+LD ILK FLHHLGI+FVLVPGTHVQI+ LL+ERGHE K++G+YRITDSE+LAA+M
Sbjct: 70 SPFLDSILK-ATFLHHLGIKFVLVPGTHVQINNLLAERGHEPKHVGQYRITDSEALAASM 128
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232
EAAG IRMMIEAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVVDGVD+GA
Sbjct: 129 EAAGKIRMMIEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVDGVDFGA 188
Query: 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 292
TGEVKKVDVTRMRERLDGGC+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLIC+I
Sbjct: 189 TGEVKKVDVTRMRERLDGGCIVVLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVI 248
Query: 293 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 352
DGPILDESGHLIRFLTL+EAD LIR+R KQSEIAA+YVKAV +ED+T H+DSIG + S
Sbjct: 249 DGPILDESGHLIRFLTLEEADMLIRKRAKQSEIAAHYVKAVGDEDLTFLEHNDSIGILAS 308
Query: 353 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412
S NGK S R ATF NGVGFDNGNG QGFAIGG+E SRLNGYLSELAAAAFVC+
Sbjct: 309 SLNGKALSGRHSATFQNGVGFDNGNG-----QGFAIGGEELQSRLNGYLSELAAAAFVCK 363
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTDL+GI+QIIQPL ES
Sbjct: 364 GGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARVTDLAGIRQIIQPLEES 423
Query: 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
G LVRRTDEELLKAL ++ VVEREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGD
Sbjct: 424 GTLVRRTDEELLKALYAYVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGD 483
Query: 533 KLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 592
KLLD+IE++A+SLGL+ LFLLTTRTADWF RGF ECSI++IPEERRK+INLSRNSKYY
Sbjct: 484 KLLDFIERRASSLGLETLFLLTTRTADWFNRRGFSECSIQLIPEERRKKINLSRNSKYYT 543
Query: 593 KKLLPDTSGIIVDRAF 608
KKLLPDTSGI V+RAF
Sbjct: 544 KKLLPDTSGISVNRAF 559
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565491|ref|XP_003550973.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/556 (78%), Positives = 485/556 (87%), Gaps = 8/556 (1%)
Query: 58 SKCK---VFSEAMGGNV--EETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ CK VFSE G+V EE+++ ++D+QFV+WFRE WPYLWAHRG TFVVIISGEIV+
Sbjct: 10 TTCKRRNVFSEEFNGSVAEEESFSSMDDKQFVRWFRETWPYLWAHRGATFVVIISGEIVT 69
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP LDPILKDIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAM
Sbjct: 70 SPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGRQPKYVGPYRITDDESLAAAM 129
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232
EAAG IR+MIEAKLSPGP I NIRRHGD+SR HEVGVSVASGNFLAAKR+GVV G+D+G+
Sbjct: 130 EAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFGS 189
Query: 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 292
TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVLNCN YEVATACALA+ ADKLICI
Sbjct: 190 TGEVKKVDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICIT 249
Query: 293 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 352
DGPILDESGHLIRFL LQEAD LIR++V++SE AANYVKAVAEE + + G+V+S
Sbjct: 250 DGPILDESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFN--GAVHS 307
Query: 353 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412
+NGK FSE +TF+NGVGFDNGNGL S + GFAIGGQE LSR NGYLSELAAAAFVCR
Sbjct: 308 PRNGKPFSEYHNSTFHNGVGFDNGNGL-SGKHGFAIGGQESLSRTNGYLSELAAAAFVCR 366
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD SGIKQ+IQPL ES
Sbjct: 367 GGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEES 426
Query: 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
G LV+RTDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI VSP+CRGQGQGD
Sbjct: 427 GILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGD 486
Query: 533 KLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 592
KLLDYIEKKA+S+G +MLFLLTTRTADWF RGF ECSI+ IPE++RK INLSR SKYYM
Sbjct: 487 KLLDYIEKKASSIGFEMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKTINLSRKSKYYM 546
Query: 593 KKLLPDTSGIIVDRAF 608
KKLLP+ SGI V F
Sbjct: 547 KKLLPNKSGITVSSRF 562
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540624|ref|XP_003538787.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/600 (73%), Positives = 501/600 (83%), Gaps = 12/600 (2%)
Query: 7 SVSASATKTQLLFSSRVSNSLKPAQNLGFQLQ-GQILKGLCHHSIKNKERNLSKCKVFSE 65
+ S + + L+SS S+ L P NL F G ++ + + N+++
Sbjct: 11 NTSGTLSDFNKLYSSSHSHHL-PKPNLQFNSSWGPEVRPVTAAHLGNRKK--------LN 61
Query: 66 AMGGNVEETYN-PVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIA 124
A+ + E +Y+ +ED+QFV+ FREAWPYLWA+RG TFVVIISGEIVS P+LD ILKDIA
Sbjct: 62 ALSEDGESSYHGSMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDVILKDIA 121
Query: 125 FLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEA 184
FL+HLGIRFVLVPGTHVQIDKLL+ERG + Y+GRYRITD ESL AAMEAAGGIR+MIEA
Sbjct: 122 FLNHLGIRFVLVPGTHVQIDKLLNERGCQPMYVGRYRITDDESLEAAMEAAGGIRLMIEA 181
Query: 185 KLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRM 244
KLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+TGEVKKVDVTRM
Sbjct: 182 KLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVTRM 241
Query: 245 RERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLI 304
RERLDGGC+V+L+NLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILDESGHLI
Sbjct: 242 RERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLI 301
Query: 305 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364
RFL LQEAD LIR+R KQS+ AANYVKAV EE ++ G+V S G F+E
Sbjct: 302 RFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVKSPPIG-CFTEWHN 360
Query: 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 424
ATF+NGVGF+NGNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVCR GVQRVHLLDGT
Sbjct: 361 ATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGT 420
Query: 425 IGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL 484
I GVLLLELFKRDGMGTMVASDLYEGTRTA+V D+SGIKQ+I PL SG LV+RTDEELL
Sbjct: 421 ISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEASGILVKRTDEELL 480
Query: 485 KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS 544
K LDSF VVEREG IIACAA+FP F+EKCGEVA I VSP+CRGQGQGDKLLDY+EKKA+S
Sbjct: 481 KTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASS 540
Query: 545 LGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIV 604
LG +MLFLLTTRTADWF RGF ECSI+ IPE++R+ INLSRNSKYYMKKLLP+ SGI V
Sbjct: 541 LGFNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMKKLLPNISGITV 600
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514348|ref|XP_003525868.1| PREDICTED: LOW QUALITY PROTEIN: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/569 (76%), Positives = 479/569 (84%), Gaps = 21/569 (3%)
Query: 58 SKCK---VFSEAMGGNV--EETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ CK VFSE G+V EE+YN ++++QFV+WFRE WPYLWAHRG TFVVIISGEIV+
Sbjct: 49 TTCKGRNVFSEEFNGSVAEEESYNSMDNKQFVRWFRETWPYLWAHRGATFVVIISGEIVT 108
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP LDPILKDIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAM
Sbjct: 109 SPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLLERGRQPKYVGPYRITDDESLAAAM 168
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK------------ 220
EAAG IR+MIEAKLSPGP I N RRHG +SR HEVGVSVASGNF +
Sbjct: 169 EAAGRIRLMIEAKLSPGPSIYNSRRHGGNSRLHEVGVSVASGNFSFFQDGNDQVSGARVP 228
Query: 221 -RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATAC 279
R+GVV GVD+G+TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVL+CNTYEVATAC
Sbjct: 229 WRRGVVKGVDFGSTGEVKKVDISRMRERLDGDCIVILSNLGYSSSGEVLDCNTYEVATAC 288
Query: 280 ALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDIT 339
ALA+ ADKLICI DGPILDESGHLIRFLTLQEAD LIR+R++QSE ANYVKAVAEE
Sbjct: 289 ALAVRADKLICITDGPILDESGHLIRFLTLQEADMLIRKRLEQSETTANYVKAVAEESFK 348
Query: 340 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399
+ + G+V+SSQNGK FSE +TF+NGVGFDNGNGL S EQGFAIGGQE L R NG
Sbjct: 349 SLKNFN--GAVHSSQNGKPFSECHNSTFHNGVGFDNGNGL-SEEQGFAIGGQESLCRTNG 405
Query: 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDL 459
YLSELAAAAFVCR GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD
Sbjct: 406 YLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDF 465
Query: 460 SGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519
SGIK++IQP ESG LV+ TDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI
Sbjct: 466 SGIKKLIQPFEESGILVKXTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAI 525
Query: 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERR 579
VSP+CRGQGQGDKLLDY+EKKA+SLG +MLFLLTTRTADWF RGF ECS + IPE++R
Sbjct: 526 AVSPDCRGQGQGDKLLDYLEKKASSLGFEMLFLLTTRTADWFVRRGFSECSFDYIPEKKR 585
Query: 580 KRINLSRNSKYYMKKLLPDTSGIIVDRAF 608
K INLSR SKYYMKKLLP+ SGI V F
Sbjct: 586 KTINLSRKSKYYMKKLLPNKSGITVSSRF 614
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568615|ref|XP_002525281.1| N-acetyltransferase, putative [Ricinus communis] gi|223535439|gb|EEF37109.1| N-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/550 (76%), Positives = 476/550 (86%), Gaps = 19/550 (3%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
+D ++V+ RE PY+ HR TFVV++SGE+V SP+LD +L+DIAFLHHLGIRFVLVPG
Sbjct: 68 DDRKYVEVLREVQPYILLHRRSTFVVVLSGEVVDSPFLDNLLQDIAFLHHLGIRFVLVPG 127
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
THVQID LL+ERGHEA+Y+G YRITD+E+L+A+MEAAG IRM++EAKLSPGP ICNIRRH
Sbjct: 128 THVQIDNLLAERGHEAQYVGPYRITDTEALSASMEAAGKIRMLMEAKLSPGPSICNIRRH 187
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
GDSSRWH+VGVSVASGNFLAAKR+GVV+GVD+GATGEVKKVDVTRMRERLD C+V+LSN
Sbjct: 188 GDSSRWHDVGVSVASGNFLAAKRRGVVEGVDFGATGEVKKVDVTRMRERLDANCIVLLSN 247
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
LGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILDESGHLIR+L ++EAD+LIR+
Sbjct: 248 LGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLIRYLAIEEADALIRK 307
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTF---SERRIATFNNGVGFDN 375
R KQSEIAANYVKAV +ED T HSDS+ + SSQNGK S +++ NG +
Sbjct: 308 RAKQSEIAANYVKAVGKEDFTSIEHSDSVRVISSSQNGKPINGDSVNVMSSSQNGKPVNG 367
Query: 376 GNG----------------LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVH 419
+G LWS EQGFAIGG ER SRLNGYLSELAAA FVC+ GVQRVH
Sbjct: 368 RHGATFHFQNGVGFGNGNGLWSGEQGFAIGGHERQSRLNGYLSELAAATFVCKGGVQRVH 427
Query: 420 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT 479
LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A++TDLSGI+QIIQPL +SG LVRRT
Sbjct: 428 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARMTDLSGIRQIIQPLEDSGVLVRRT 487
Query: 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIE 539
DEELLKALDSF V+EREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGDKLLD+IE
Sbjct: 488 DEELLKALDSFVVMEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDFIE 547
Query: 540 KKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDT 599
KKA+SLGL+MLFLLTTRTADWFK RGF ECSIEMIP++RRK+INLSRNSKYYMKKLLP+T
Sbjct: 548 KKASSLGLEMLFLLTTRTADWFKRRGFSECSIEMIPQKRRKKINLSRNSKYYMKKLLPNT 607
Query: 600 SGIIVDRAFR 609
SGI ++R +
Sbjct: 608 SGITINRQLQ 617
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496999|ref|XP_003517352.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/526 (79%), Positives = 466/526 (88%), Gaps = 1/526 (0%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
ED +FVK RE+ PY+ HRG FV++IS E+V+SPY +PILKDIAFL+HLGIRFVLVPG
Sbjct: 74 EDHEFVKALRESQPYVSVHRGRLFVLLISAELVASPYFNPILKDIAFLNHLGIRFVLVPG 133
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
THVQIDKLL+ERG + KY+GRYRITD ESL AAMEAAGGIR+MIEAKLSPGP ICNIRRH
Sbjct: 134 THVQIDKLLNERGCQPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRH 193
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
GD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+TGEVKKVDV+RMRERLDGGC+VIL+N
Sbjct: 194 GDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTN 253
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
LGYSSSGEVLNCNTYEVATACALAI ADKLIC+IDGPILDESG LIRFL LQEAD LIR+
Sbjct: 254 LGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDESGRLIRFLPLQEADMLIRK 313
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R +QSE AANYVKAV EE +++ G+V S G+ F+E ATF+NGVGF++GNG
Sbjct: 314 RAEQSEAAANYVKAVDEEGFNSLEYNNFNGAVKSPPIGR-FTEWHNATFHNGVGFESGNG 372
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDG 438
L S EQGFAIGGQERLSR+NGYLSELAAAAFVCR GVQRVHLLDGTI GVLLLELFKRDG
Sbjct: 373 LGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDG 432
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQ 498
MGTMVASDLYEGTRTA V D+SGIKQ+IQPL SG LV+RTDEELLK LDSF VVEREG
Sbjct: 433 MGTMVASDLYEGTRTAGVKDISGIKQLIQPLEASGILVKRTDEELLKTLDSFIVVEREGH 492
Query: 499 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 558
IIACAALFP F+EKCGEVA I VSP+CRGQGQGDKLLDY+EKKA+SLGL+MLFLLTTRTA
Sbjct: 493 IIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSLGLNMLFLLTTRTA 552
Query: 559 DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIV 604
DWF RGF ECSI+ +PE++R+ INLSRNSKYYMKKLLP+ SGI V
Sbjct: 553 DWFVRRGFSECSIDYLPEKKRRMINLSRNSKYYMKKLLPNISGITV 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297821519|ref|XP_002878642.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] gi|297324481|gb|EFH54901.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/555 (74%), Positives = 467/555 (84%), Gaps = 8/555 (1%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNMFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPIL
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPIL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKHTLTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR AKV DL+GI+QII PL ESGA
Sbjct: 412 VNRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTREAKVEDLAGIRQIITPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 LDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 594
LDYIEKKA++ GL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SKYYMKK
Sbjct: 532 LDYIEKKASAFGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSKYYMKK 591
Query: 595 LLPDTSGIIVDRAFR 609
LLPD SGI V R F+
Sbjct: 592 LLPDRSGISVVRTFQ 606
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798106|ref|XP_002866937.1| hypothetical protein ARALYDRAFT_490852 [Arabidopsis lyrata subsp. lyrata] gi|297312773|gb|EFH43196.1| hypothetical protein ARALYDRAFT_490852 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/605 (70%), Positives = 488/605 (80%), Gaps = 7/605 (1%)
Query: 8 VSASATKTQLLFSSRVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKCKVFSEAM 67
V S++ + F R S + P+ +L + C +KC +F A+
Sbjct: 7 VGTSSSSCYVPFQFRQSKTFFPSFRPKTKLNPIQFRFNCPWFKPVSSVTAAKCNMFDYAV 66
Query: 68 --GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAF 125
GG+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ DPILKDIAF
Sbjct: 67 SAGGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDPILKDIAF 125
Query: 126 LHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAK 185
LHHLGIRFVLVPGT QID+LLSERG EA Y+GRYR+TD+ SL AA EAAG I +M+EAK
Sbjct: 126 LHHLGIRFVLVPGTQEQIDELLSERGREATYVGRYRVTDAASLQAAKEAAGAISVMLEAK 185
Query: 186 LSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMR 245
LSPGP ICNIRRHGD +R H++GV V +GNF AAKR+GVVDGVD+GATGEVKK+DV R+
Sbjct: 186 LSPGPSICNIRRHGDRNRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKKIDVDRIC 245
Query: 246 ERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIR 305
ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILDESGHLIR
Sbjct: 246 ERLDGGSIVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILDESGHLIR 305
Query: 306 FLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGS-VYSSQNGKTF---SE 361
FLTLQEAD L+R R +QS+IAANYVKAV + +T ++ S + S QNG+ +
Sbjct: 306 FLTLQEADMLVRTRAQQSDIAANYVKAVGDGSMTYPEPPNNTSSKITSPQNGRAAFWGNG 365
Query: 362 RRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLL 421
F NGVGFDNGNGLWS EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GV+RVHLL
Sbjct: 366 NHTPVFQNGVGFDNGNGLWSGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVKRVHLL 425
Query: 422 DGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 481
DGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL GI+ II+PL ESG LVRRTDE
Sbjct: 426 DGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLEGIRHIIKPLEESGILVRRTDE 485
Query: 482 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKK 541
ELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKLLDYIEKK
Sbjct: 486 ELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKLLDYIEKK 545
Query: 542 AASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 601
A+SLGL+ LFLLTTRTADWF RGF+ECSIE+IPE RR+RINLSR SKYY KKLLPD SG
Sbjct: 546 ASSLGLEKLFLLTTRTADWFVRRGFQECSIEIIPESRRQRINLSRKSKYYTKKLLPDRSG 605
Query: 602 IIVDR 606
I V R
Sbjct: 606 ISVLR 610
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30681866|ref|NP_179875.2| amino-acid N-acetyltransferase [Arabidopsis thaliana] gi|28393691|gb|AAO42258.1| putative amino acid acetyltransferase [Arabidopsis thaliana] gi|29824347|gb|AAP04134.1| putative amino acid acetyltransferase [Arabidopsis thaliana] gi|330252278|gb|AEC07372.1| amino-acid N-acetyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/555 (74%), Positives = 468/555 (84%), Gaps = 8/555 (1%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNIFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+L
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPVL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESGA
Sbjct: 412 VKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 LDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 594
LDYIEKKA++LGL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SKYYMKK
Sbjct: 532 LDYIEKKASALGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSKYYMKK 591
Query: 595 LLPDTSGIIVDRAFR 609
LLPD SGI V R F+
Sbjct: 592 LLPDRSGISVVRTFQ 606
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573209|ref|NP_974701.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] gi|209414522|gb|ACI46501.1| At4g37670 [Arabidopsis thaliana] gi|332661422|gb|AEE86822.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/613 (70%), Positives = 497/613 (81%), Gaps = 19/613 (3%)
Query: 2 ATTHHSVSASATKTQLLFSS-RVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKC 60
+T+ + V +++ FSS + N L P Q F+ K + SI +KC
Sbjct: 11 STSSYYVPYHFRQSKSNFSSFKPKNKLNPTQ---FRFNCSWFKPV--SSI-----TAAKC 60
Query: 61 KVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP 118
+F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ D
Sbjct: 61 NMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDA 119
Query: 119 ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178
ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAAG I
Sbjct: 120 ILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAAGAI 179
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGEVKK
Sbjct: 180 SVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKK 239
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 298
+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILD
Sbjct: 240 IDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILD 299
Query: 299 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCF-GHSDSIGSVYSSQNGK 357
ESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + +++ G++ S+QNG+
Sbjct: 300 ESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQNGR 359
Query: 358 TFS----ERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 413
S F NGVGFDNGNGLW EQGFAIGG+ERLSRLNGYLSELAAAAFVCR
Sbjct: 360 AVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFVCRG 419
Query: 414 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 473
GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL ESG
Sbjct: 420 GVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLEESG 479
Query: 474 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQGDK
Sbjct: 480 ILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQGDK 539
Query: 534 LLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 593
LLDYIEKKA+SLGL+ LFLLTTRTADWF RGF+ECSIE+IPE RR+RINLSRNSKYYMK
Sbjct: 540 LLDYIEKKASSLGLEKLFLLTTRTADWFVRRGFQECSIEIIPESRRQRINLSRNSKYYMK 599
Query: 594 KLLPDTSGIIVDR 606
KL+PD SGI V R
Sbjct: 600 KLIPDRSGISVMR 612
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 609 | ||||||
| TAIR|locus:2120130 | 613 | NAGS2 "N-acetyl-l-glutamate sy | 0.899 | 0.893 | 0.730 | 5.5e-212 | |
| TAIR|locus:2059165 | 609 | NAGS1 "N-acetyl-l-glutamate sy | 0.898 | 0.898 | 0.724 | 8e-211 | |
| UNIPROTKB|P22567 | 432 | argA "Amino-acid acetyltransfe | 0.331 | 0.467 | 0.490 | 4.5e-84 | |
| TIGR_CMR|CPS_0465 | 436 | CPS_0465 "amino-acid N-acetylt | 0.379 | 0.529 | 0.394 | 1.1e-78 | |
| UNIPROTKB|P0A6C5 | 443 | argA [Escherichia coli K-12 (t | 0.356 | 0.489 | 0.403 | 7.5e-76 | |
| TIGR_CMR|SO_4245 | 445 | SO_4245 "amino-acid acetyltran | 0.325 | 0.444 | 0.393 | 4.3e-70 | |
| UNIPROTKB|Q9KPQ0 | 445 | argA "Amino-acid acetyltransfe | 0.315 | 0.431 | 0.375 | 4.4e-68 | |
| TIGR_CMR|VC_2316 | 445 | VC_2316 "N-acetylglutamate syn | 0.315 | 0.431 | 0.375 | 4.4e-68 | |
| TIGR_CMR|CHY_2263 | 294 | CHY_2263 "acetylglutamate kina | 0.361 | 0.748 | 0.270 | 1.3e-18 | |
| TIGR_CMR|GSU_0150 | 292 | GSU_0150 "acetylglutamate kina | 0.354 | 0.739 | 0.277 | 4.7e-15 |
| TAIR|locus:2120130 NAGS2 "N-acetyl-l-glutamate synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2049 (726.3 bits), Expect = 5.5e-212, P = 5.5e-212
Identities = 406/556 (73%), Positives = 464/556 (83%)
Query: 58 SKCKVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY 115
+KC +F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++
Sbjct: 58 AKCNMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSS 116
Query: 116 LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175
D ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAA
Sbjct: 117 CDAILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAA 176
Query: 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 235
G I +M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGE
Sbjct: 177 GAISVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGE 236
Query: 236 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295
VKK+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGP
Sbjct: 237 VKKIDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGP 296
Query: 296 ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC-FGHSDSIGSVYSSQ 354
ILDESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + +++ G++ S+Q
Sbjct: 297 ILDESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQ 356
Query: 355 NGKTFS----ERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV 410
NG+ S LW EQGFAIGG+ERLSRLNGYLSELAAAAFV
Sbjct: 357 NGRAVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFV 416
Query: 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470
CR GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL
Sbjct: 417 CRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLE 476
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 530
ESG LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQ
Sbjct: 477 ESGILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQ 536
Query: 531 GDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 590
GDKLLDYIEKKA+SLGL+ LFLLTTRTADWF RGF+ECSIE+IPE RR+RINLSRNSKY
Sbjct: 537 GDKLLDYIEKKASSLGLEKLFLLTTRTADWFVRRGFQECSIEIIPESRRQRINLSRNSKY 596
Query: 591 YMKKLLPDTSGIIVDR 606
YMKKL+PD SGI V R
Sbjct: 597 YMKKLIPDRSGISVMR 612
|
|
| TAIR|locus:2059165 NAGS1 "N-acetyl-l-glutamate synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2038 (722.5 bits), Expect = 8.0e-211, P = 8.0e-211
Identities = 402/555 (72%), Positives = 457/555 (82%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNIFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+L
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPVL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ T LWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESGA
Sbjct: 412 VKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 LDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 594
LDYIEKKA++LGL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SKYYMKK
Sbjct: 532 LDYIEKKASALGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSKYYMKK 591
Query: 595 LLPDTSGIIVDRAFR 609
LLPD SGI V R F+
Sbjct: 592 LLPDRSGISVVRTFQ 606
|
|
| UNIPROTKB|P22567 argA "Amino-acid acetyltransferase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 100/204 (49%), Positives = 135/204 (66%)
Query: 394 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 451
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 572 EMIPEERRKRINLSRNSKYYMKKL 595
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
|
| TIGR_CMR|CPS_0465 CPS_0465 "amino-acid N-acetyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
++ +VKWFR A PY+ AHRG T V++ GE V+ P I+ DI+ L LG++ V+V G
Sbjct: 5 EQNYVKWFRNAAPYINAHRGKTVVLMFGGEAVTHPNFANIIHDISLLRSLGVKLVVVHGA 64
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
QI + +RG E + R+TD+++L A +A G +R+ IEA LS G + N HG
Sbjct: 65 RPQIVDRMQQRGLEENVVSNIRVTDAQTLVAVKDATGSLRLHIEALLSTG--VVNSPMHG 122
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
R V++GNF+ AK GV +G+DY TG V+++D + +LD G +V+LS +
Sbjct: 123 SQIR-------VSTGNFVIAKPMGVRNGIDYKYTGTVRRIDSDGINMQLDYGSIVLLSPI 175
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GEV N +VAT A++++ADKLI D ++D+SG LIR +++ +L+ +
Sbjct: 176 GYSPTGEVFNLALEDVATQTAISLKADKLIAFTEDEGLIDKSGKLIRSCSVRTVKTLLDE 235
Query: 319 R 319
+
Sbjct: 236 K 236
|
|
| UNIPROTKB|P0A6C5 argA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 425 (154.7 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 88/218 (40%), Positives = 128/218 (58%)
Query: 379 LWSSEQGFAIGGQERLSRLN-GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD 437
L+ +E + QE N G + L A CR GV+R HL+ G LL ELF RD
Sbjct: 225 LFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRD 284
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G+GT + + E R A + D+ GI ++I+PL + G LVRR+ E+L +D F +++R+
Sbjct: 285 GIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDN 344
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557
IACAAL+PF +EK GE+A + V P+ R +G+ LL+ I +A GL LF+LTTR+
Sbjct: 345 TTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRS 404
Query: 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
WF+ RGF I+++PE +++ N R SK M L
Sbjct: 405 IHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADL 442
|
|
| TIGR_CMR|SO_4245 SO_4245 "amino-acid acetyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 4.3e-70, Sum P(2) = 4.3e-70
Identities = 78/198 (39%), Positives = 117/198 (59%)
Query: 392 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 451
E+ S G ++ L A+ CR GV R HL+ G LL ELF R+G+GT + ++ E
Sbjct: 242 EQGSACIGTMAFLKASIDACRNGVPRCHLVSYLDDGALLQELFSREGIGTQIVTESAERL 301
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
R A ++D+ GI +I+PL E G LVRR+ E+L ++ F ++ER+G +I CAAL+PF ++
Sbjct: 302 RRASISDIGGILNLIRPLEEQGILVRRSREQLEIEIEQFMLIERDGLVIGCAALYPFEED 361
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571
GE A + V P+ R +G LL I +A S G LF LTTR+ WF GF +
Sbjct: 362 NAGEFACLVVHPDYRDADRGSLLLKNIIGQARSRGYSRLFALTTRSIHWFLEHGFVIEDV 421
Query: 572 EMIPEERRKRINLSRNSK 589
+ +P+++++ N R SK
Sbjct: 422 DALPQKKKQLYNYQRRSK 439
|
|
| UNIPROTKB|Q9KPQ0 argA "Amino-acid acetyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 4.4e-68, Sum P(2) = 4.4e-68
Identities = 72/192 (37%), Positives = 113/192 (58%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
L AA CR GV R HL+ G L+ ELF DG+GT + E R A + D+ GI
Sbjct: 254 LRAALKACRAGVPRSHLVSYKEDGALIQELFSFDGIGTQIVMASAEQIRQATIDDIGGIF 313
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G LVRR+ E+L + + F +++++G +I C+AL+P+ +E+ E+A + + P
Sbjct: 314 DLIRPLEEQGILVRRSREQLEQEIHKFTIIDKDGLVIGCSALYPYPEERMAEMACVAIHP 373
Query: 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 583
E R +G LL + + +A +G+ LF+LTT + WF+ +GF E +E +P ++ N
Sbjct: 374 EYRDGHRGLHLLVHSKHQAKQMGIRHLFVLTTHSTHWFREQGFNEVDVEALPMAKKSLYN 433
Query: 584 LSRNSKYYMKKL 595
R SK M +L
Sbjct: 434 YQRRSKILMLQL 445
|
|
| TIGR_CMR|VC_2316 VC_2316 "N-acetylglutamate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 4.4e-68, Sum P(2) = 4.4e-68
Identities = 72/192 (37%), Positives = 113/192 (58%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
L AA CR GV R HL+ G L+ ELF DG+GT + E R A + D+ GI
Sbjct: 254 LRAALKACRAGVPRSHLVSYKEDGALIQELFSFDGIGTQIVMASAEQIRQATIDDIGGIF 313
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G LVRR+ E+L + + F +++++G +I C+AL+P+ +E+ E+A + + P
Sbjct: 314 DLIRPLEEQGILVRRSREQLEQEIHKFTIIDKDGLVIGCSALYPYPEERMAEMACVAIHP 373
Query: 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 583
E R +G LL + + +A +G+ LF+LTT + WF+ +GF E +E +P ++ N
Sbjct: 374 EYRDGHRGLHLLVHSKHQAKQMGIRHLFVLTTHSTHWFREQGFNEVDVEALPMAKKSLYN 433
Query: 584 LSRNSKYYMKKL 595
R SK M +L
Sbjct: 434 YQRRSKILMLQL 445
|
|
| TIGR_CMR|CHY_2263 CHY_2263 "acetylglutamate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 66/244 (27%), Positives = 120/244 (49%)
Query: 89 EAWPYLWAHRGGTFVVIISGE-IVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G +VS + ++ D+ + +GI V+V G +I ++L
Sbjct: 13 EALPYIKKFYGKTIVIKYGGHAMVSDQLKEAVINDLVLMKFVGINPVVVHGGGPEISRML 72
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207
++ ++ ++ R+TD A +E + M++ K++ + I + G + V
Sbjct: 73 NKLNIKSNFINGLRVTDE----ATLEV---VEMVLVGKVNK-EIVGLIEKAGGKA----V 120
Query: 208 GVSVASGNFLAAKRKGVVD----GVDY---GATGEVKKVDVTRMRERLDGGCLVILSNLG 260
G+S + A +K + G +Y G GE+ +V+ + +D G + +++ +G
Sbjct: 121 GLSGKDAGLIKAHKKLAKNPEPTGEEYLDLGYVGEISEVNPEILLTLIDKGYIPVVAPVG 180
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGP--ILDESGH--LIRFLTLQEADSLI 316
+ SGE N N EVA A+A++ADKLI + D P +L+E L+ T+ E LI
Sbjct: 181 SNGSGEFYNINADEVAAEVAVALKADKLIVLTDTPGILLNEKDENSLLSKATIAEVKELI 240
Query: 317 RQRV 320
+ V
Sbjct: 241 NRGV 244
|
|
| TIGR_CMR|GSU_0150 GSU_0150 "acetylglutamate kinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 66/238 (27%), Positives = 112/238 (47%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G ++ L + D+ L LGI V+V G QI++ L
Sbjct: 13 EALPYIRRFSGKTIVIKYGGHAMADEALKESFALDVIMLKSLGINPVVVHGGGPQINETL 72
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207
G ++++ R+TD AA M+ + M++ +++ + + +HG + V
Sbjct: 73 KRYGIVSEFVKGMRVTD----AATMQV---VEMVLTGQVNK-EVVGYLNQHGGRA----V 120
Query: 208 GVSVASGNFLAAKR--------KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
G+S GN L ++ G V+ VD G G+V KV+ ++ G + +++ +
Sbjct: 121 GLSGKDGNLLLCRKLLQEVRQDDGTVESVDIGFVGDVVKVNQELIQTLEHGKFIPVIAPV 180
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLI 316
G GE N N VA A A+ A+KLI + D + D++G L+ + L LI
Sbjct: 181 GVGEQGESYNVNADLVAGRVAGALRAEKLILLTDVAGVKDKAGALLSSIRLDTVPGLI 238
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.VII.115.1 | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (EC-2.7.2.8) (511 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.6145.3.1 | annotation not avaliable (279 aa) | • | • | • | • | • | 0.914 | ||||
| gw1.193.135.1 | annotation not avaliable (279 aa) | • | • | • | • | • | 0.914 | ||||
| estExt_fgenesh4_pm.C_LG_X0783 | delta-1-pyrroline-5-carboxylate synthetase (EC-2.7.2.11 1.2.1.41) (719 aa) | • | • | 0.909 | |||||||
| gw1.97.87.1 | hypothetical protein (637 aa) | • | 0.899 | ||||||||
| eugene3.01290011 | annotation not avaliable (139 aa) | • | 0.899 | ||||||||
| eugene3.00150904 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (412 aa) | • | 0.899 | ||||||||
| eugene3.00130573 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (411 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIX0409 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (411 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_2320019 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (412 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_2320006 | hypothetical protein (482 aa) | • | • | 0.849 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 609 | |||
| PLN02825 | 515 | PLN02825, PLN02825, amino-acid N-acetyltransferase | 0.0 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 1e-117 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 2e-77 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 1e-72 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 3e-59 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 2e-57 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 1e-45 | |
| COG1246 | 153 | COG1246, ArgA, N-acetylglutamate synthase and rela | 2e-38 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 3e-27 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 8e-27 | |
| TIGR00761 | 231 | TIGR00761, argB, acetylglutamate kinase | 1e-24 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 3e-23 | |
| PRK07757 | 152 | PRK07757, PRK07757, acetyltransferase; Provisional | 4e-21 | |
| PLN02512 | 309 | PLN02512, PLN02512, acetylglutamate kinase | 5e-19 | |
| cd04252 | 248 | cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acety | 3e-17 | |
| CHL00202 | 284 | CHL00202, argB, acetylglutamate kinase; Provisiona | 4e-17 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 7e-17 | |
| PRK12308 | 614 | PRK12308, PRK12308, bifunctional argininosuccinate | 1e-16 | |
| PRK14058 | 268 | PRK14058, PRK14058, acetylglutamate/acetylaminoadi | 8e-16 | |
| PRK07922 | 169 | PRK07922, PRK07922, N-acetylglutamate synthase; Va | 8e-15 | |
| cd04251 | 257 | cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glut | 2e-13 | |
| pfam00696 | 230 | pfam00696, AA_kinase, Amino acid kinase family | 4e-12 | |
| cd02115 | 248 | cd02115, AAK, Amino Acid Kinases (AAK) superfamily | 5e-12 | |
| pfam13508 | 79 | pfam13508, Acetyltransf_7, Acetyltransferase (GNAT | 6e-11 | |
| pfam00583 | 80 | pfam00583, Acetyltransf_1, Acetyltransferase (GNAT | 2e-10 | |
| cd04301 | 65 | cd04301, NAT_SF, N-Acyltransferase superfamily: Va | 2e-10 | |
| cd04249 | 252 | cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glut | 1e-08 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 1e-07 | |
| PRK04531 | 398 | PRK04531, PRK04531, acetylglutamate kinase; Provis | 3e-06 | |
| COG0456 | 177 | COG0456, RimI, Acetyltransferases [General functio | 6e-06 | |
| pfam13673 | 118 | pfam13673, Acetyltransf_10, Acetyltransferase (GNA | 4e-05 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 5e-05 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 7e-05 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 1e-04 | |
| pfam13527 | 127 | pfam13527, Acetyltransf_9, Acetyltransferase (GNAT | 2e-04 | |
| TIGR01575 | 131 | TIGR01575, rimI, ribosomal-protein-alanine acetylt | 0.001 | |
| cd02169 | 297 | cd02169, Citrate_lyase_ligase, Citrate lyase ligas | 0.001 | |
| pfam13420 | 154 | pfam13420, Acetyltransf_4, Acetyltransferase (GNAT | 0.004 |
| >gnl|CDD|215441 PLN02825, PLN02825, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 987 bits (2553), Expect = 0.0
Identities = 408/516 (79%), Positives = 454/516 (87%), Gaps = 3/516 (0%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
FV+WFREAWPY+ HRG TFVV+ISGE+V+ P+LD IL+DI+ LH LGI+FVLVPGTHVQ
Sbjct: 1 FVRWFREAWPYIQGHRGSTFVVVISGEVVAGPHLDNILQDISLLHGLGIKFVLVPGTHVQ 60
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
IDKLL+ERG E KY+G YRITDS +L A+MEAAG IR+MIEAKLSPGP I N+RRHGD+S
Sbjct: 61 IDKLLAERGREPKYVGAYRITDSAALQASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNS 120
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
RWHEVGVSVASGNFLAAKR+GVV+GVD+GATGEVKK+DV+R++ERLD C+V+LSNLGYS
Sbjct: 121 RWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLDSNCIVLLSNLGYS 180
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQ 322
SSGEVLNCNTYEVATACALAI ADKLICI+DGPILDE+G LIRF+TL+EAD LIR+R KQ
Sbjct: 181 SSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQ 240
Query: 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIAT--FNNGVGFDNGNGLW 380
SEIAANYVKAV ED + DS+ + + NG+ F AT F NGVGFDNGNGL
Sbjct: 241 SEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGL- 299
Query: 381 SSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMG 440
S EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GVQRVHLLDGTI GVLLLELF RDGMG
Sbjct: 300 SGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMG 359
Query: 441 TMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQII 500
TM+ASD+YEGTR A+V DL+GI+QII+PL ESG LVRRTDEELL+ALDSF VVEREG II
Sbjct: 360 TMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVEREGSII 419
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 560
ACAALFPFF+EKCGEVAAI VSPECRGQGQGDKLLDYIEKKAASLGL+ LFLLTTRTADW
Sbjct: 420 ACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTTRTADW 479
Query: 561 FKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596
F RGF ECSIE +PE RRKRINLSR SKYYMKKLL
Sbjct: 480 FVRRGFSECSIESLPEARRKRINLSRGSKYYMKKLL 515
|
Length = 515 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 349 bits (897), Expect = e-117
Identities = 125/255 (49%), Positives = 163/255 (63%), Gaps = 10/255 (3%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
QFV WFREA PY+ AHRG TFV+ GE V+ P D I+ DIA LH LGIR VLV G
Sbjct: 1 QFVDWFREAAPYINAHRGKTFVIAFGGEAVAHPNFDNIVHDIALLHSLGIRLVLVHGARP 60
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QID+ L+ERG E +Y RITD+ +L EAAG +R+ IEA LS G P +
Sbjct: 61 QIDQRLAERGLEPRYHRGLRITDAAALECVKEAAGAVRLEIEALLSMGLPNSPMAG---- 116
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
+ V SGNF+ A+ GVVDGVD+G TGEV+++D +R +LD G +V+LS LGY
Sbjct: 117 -----ARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSPLGY 171
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
S +GEV N + +VATA A+A++ADKLI + DGP +LD+ G LIR LT QEA++L+
Sbjct: 172 SPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETGA 231
Query: 321 KQSEIAANYVKAVAE 335
+ A ++A E
Sbjct: 232 LLTNDTARLLQAAIE 246
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 2e-77
Identities = 106/241 (43%), Positives = 146/241 (60%), Gaps = 16/241 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+FV WFR + PY+ AHRG TFV+++ GE ++ I+ DIA LH LGIR VLV G
Sbjct: 8 EFVDWFRHSAPYINAHRGKTFVIMLGGEAIAHGNFSNIVHDIALLHSLGIRLVLVHGARP 67
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI++ L+ RG E +Y R+TD+ +L +AAG +R+ IEA+LS P P+
Sbjct: 68 QIEEQLAARGIEPRYHKGLRVTDAAALECVKQAAGELRLDIEARLSMGLPNTPMAGAH-- 125
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGNF+ A+ GV DGVDY TGEV+++D +R +LD G +V+LS
Sbjct: 126 ----------IRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVLLSP 175
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIR 317
LGYS +GE N EVAT A+A++ADKLI + +LDE G LIR L+ EA +L+
Sbjct: 176 LGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLE 235
Query: 318 Q 318
Sbjct: 236 A 236
|
Length = 441 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 239 bits (613), Expect = 1e-72
Identities = 94/192 (48%), Positives = 127/192 (66%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
L AA CR GV+R HL+ G LL ELF RDG+GTM+ + E R A + D+ GI
Sbjct: 250 LRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGIL 309
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
++I+PL E G LVRR+ E+L + +D F V+ER+G II CAAL+PF +EK GE+A + V P
Sbjct: 310 ELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHP 369
Query: 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 583
+ RG G+G++LL IE++A LGL LF+LTTRTA WF RGF ++ +PE +R+ N
Sbjct: 370 DYRGSGRGERLLKRIEQRARQLGLKRLFVLTTRTAHWFLERGFVPVDVDDLPEAKRQLYN 429
Query: 584 LSRNSKYYMKKL 595
R SK +K L
Sbjct: 430 YQRRSKVLVKDL 441
|
Length = 441 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 3e-59
Identities = 94/206 (45%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449
G E RL L+AA CR GV R H++ G LL ELF RDG+GT ++ + +E
Sbjct: 230 GSETTRRL------LSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFE 283
Query: 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 509
R A + D+ GI +I+PL E G LVRR+ E L + + F ++E +G II CAAL+P+
Sbjct: 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYA 343
Query: 510 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 569
+E CGE+A + VSPE + G+G++LL +IE +A +G+ LF+LTTRT WF+ RGF+
Sbjct: 344 EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTTRTGHWFRERGFQTA 403
Query: 570 SIEMIPEERRKRINLSRNSKYYMKKL 595
S++ +PE RRK N RNSK MK+L
Sbjct: 404 SVDELPEARRKLYNYQRNSKILMKRL 429
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 2e-57
Identities = 108/258 (41%), Positives = 150/258 (58%), Gaps = 20/258 (7%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
FV WFREA PY+ AHRG TFVV + GE+V L I+ DIA LH LG+R VLV G Q
Sbjct: 1 FVAWFREAAPYINAHRGKTFVVGLGGELVEGGNLGNIVADIALLHSLGVRLVLVHGARPQ 60
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+++L+ RG Y R+TD SL A +AAG +R+ IEA+LS P+ R
Sbjct: 61 IERILAARGRTPHYHRGLRVTDEASLEQAQQAAGTLRLAIEARLSMSLSNTPMAGSR--- 117
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ V SGNF+ A+ GV++GVDY TG ++K+D +R +LD G +V+LS L
Sbjct: 118 ---------LPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIVLLSPL 168
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSLIR 317
G+S +GE N + +VAT+ A++++ADKLI + G I D G L L+ QE +SL
Sbjct: 169 GHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPG-ISDPDGTLAAELSPQEVESLAE 227
Query: 318 QRVKQSEIAANYVKAVAE 335
+ SE + A +
Sbjct: 228 R--LGSETTRRLLSAAVK 243
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 161 bits (411), Expect = 1e-45
Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 20/227 (8%)
Query: 98 RGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY 156
RG T V+ + G + L + DIA L +GIR V+V G QID++L++ G E ++
Sbjct: 1 RGKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEF 60
Query: 157 LGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215
+ R+TD+E+L GG + I A+LS +HG + VG+S GN
Sbjct: 61 VKGLRVTDAETLEVVEMVLGGTVNKEIVARLS---------KHGGQA----VGLSGVDGN 107
Query: 216 FLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 275
+ AK+ V DGVD G GE++KV+ + LD G + +++ + GE LN N
Sbjct: 108 LVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIAPIAVDEDGETLNVNADTA 167
Query: 276 ATACALAIEADKLI--CIIDGPILDESGH--LIRFLTLQEADSLIRQ 318
A A A A++A+KLI + G +LD+ G LI L +EA+ LI Q
Sbjct: 168 AGALAAALKAEKLILLTDVPG-VLDDKGDPSLISELDAEEAEELIEQ 213
|
Length = 265 |
| >gnl|CDD|224167 COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 2e-38
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Query: 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK 510
R A+++D+ I ++I+PL G L+RR+ E+L + +D F ++ER+G++I CAAL P +
Sbjct: 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLE 62
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECS 570
E GE+ ++ V P+ RG G+G++LL+ + A LG+ LF+LTTR+ ++F RGF
Sbjct: 63 EDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVD 122
Query: 571 IEMIPEERRKRINLS-RNSKYYMKKLL 596
+ +PEE N R SK LL
Sbjct: 123 KDELPEEVWSSYNFCERRSKCLAFDLL 149
|
Length = 153 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 3e-27
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 102 FVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY 160
V+ G + L DI L +GI V+V G +I++LL G E++++
Sbjct: 1 VVIKYGGSAMKDEELKEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGL 60
Query: 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
R+TD E++ G + +L + R G + VG+S G + A+
Sbjct: 61 RVTDKETMEIVEMVLAGK---VNKELVS-----LLNRAGGKA----VGLSGKDGGLIKAE 108
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+K +D G GEV +V+ + L+ G + +++ + GE N N A A A
Sbjct: 109 KK-EEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPIAVDEDGETYNVNADTAAGAIA 167
Query: 281 LAIEADKLICI--IDGPILDESGHLIRFLTLQEADSLIRQ 318
A++A+KLI + + G +LD+ G LI LT +EA+ LI
Sbjct: 168 AALKAEKLILLTDVPG-VLDDPGSLISELTPKEAEELIED 206
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (276), Expect = 8e-27
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 18/235 (7%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G ++ L +DI L +GI V+V G QID+LL
Sbjct: 13 EALPYIQRFMGKTIVIKYGGNAMTDEELKEAFARDIVLLKQVGINPVVVHGGGPQIDELL 72
Query: 148 SERGHEAKYLGRYRITDSESLA-AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E++++ R+TD+E++ M AG + + + I +HG +
Sbjct: 73 KKLGIESEFVNGLRVTDAETMEVVEMVLAGKVNKELVSL---------INKHGGKA---- 119
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G + AK+ + D G GEV V+ + L+ G + ++S +G GE
Sbjct: 120 VGLSGKDGGLITAKKLE--EDEDLGFVGEVTPVNPALLEALLEAGYIPVISPIGVGEDGE 177
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
N N A A A A+ A+KLI + D P +LD+ G LI LT EA+ LI V
Sbjct: 178 TYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELIEDGV 232
|
Length = 283 |
| >gnl|CDD|233118 TIGR00761, argB, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-24
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
+VI G S L+ DIAFL +GI+ V+V G +I++LL G ++ R
Sbjct: 1 TIVIKIGGAAISDLLEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLR 60
Query: 162 ITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
+TD E+L M G + + A L +HG ++ +G++ G A+
Sbjct: 61 VTDKETLEVVEMVLIGQVNKELVALL---------NKHGINA----IGLTGGDGQLFTAR 107
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+D D G GE+KKV+ + L G + ++S+L ++ G+ LN N A A A
Sbjct: 108 Y---LDKEDLGYVGEIKKVNKALIEALLKAGYIPVISSLALTAEGQALNVNADTAAGALA 164
Query: 281 LAIEADKLICIIDGP-ILDESG-HLIRFLTLQEADSLIRQRV 320
A+ A+KL+ + D P IL+ G LI + L E + LI+Q +
Sbjct: 165 AALGAEKLVLLTDVPGILNGDGQSLISEIPLDEIEQLIKQGI 206
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model [Amino acid biosynthesis, Glutamate family]. Length = 231 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 99.5 bits (249), Expect = 3e-23
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 22/239 (9%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ RG T V+ G + L + +DI L ++GI V+V G +I+++L
Sbjct: 4 EALPYIQKFRGKTVVIKYGGNAMKDEELKESFARDIVLLKYVGINPVVVHGGGPEINEML 63
Query: 148 SERGHEAKYLGRYRITDSESL-AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E++++ R+TD E++ M G + I + I R G +
Sbjct: 64 KKLGIESEFVNGLRVTDEETMEIVEMVLVGKVNKEIVSL---------INRAGGKA---- 110
Query: 207 VGVSVASGNFLAAKRK---GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
VG+S GN + AK+K + + +D G GEV +V+ + L+ G + +++ +G
Sbjct: 111 VGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIAPVGVGE 170
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLIRQ 318
GE N N A A A A++A+KLI + D +LD+ G LI ++L+EA+ LI
Sbjct: 171 DGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIAD 229
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|236088 PRK07757, PRK07757, acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 4e-21
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
R A+++D+ I +I + G ++ R+ +EL + + FYV E EG+I+ C AL E
Sbjct: 5 RKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALH-ILWE 63
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571
E+ ++ VS + RGQG G L++ ++A LG+ +F LT + ++F+ GFRE
Sbjct: 64 DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTYQP-EFFEKLGFREVDK 122
Query: 572 EMIPE 576
E +P+
Sbjct: 123 EALPQ 127
|
Length = 152 |
| >gnl|CDD|178128 PLN02512, PLN02512, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 5e-19
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P++ RG T VV G + P L +++D+ L +G+R VLV G +I+ L
Sbjct: 37 EALPFIQRFRGKTVVVKYGGAAMKDPELKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWL 96
Query: 148 SERGHEAKYLGRYRITDSESL-AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E ++ R+TD+E++ M G + + + I + G ++
Sbjct: 97 KKVGIEPQFKNGLRVTDAETMEVVEMVLVGKVNKSLVSL---------INKAGGTA---- 143
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G L A+ + D G GEV +VD T +R +D G + +++ + G+
Sbjct: 144 VGLSGKDGRLLRARPS--PNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIATVAADEDGQ 201
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-IL---DESGHLIRFLTLQEADSLI 316
N N A A A+ A+KLI + D +L D+ G L++ L ++ LI
Sbjct: 202 AYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVRKLI 255
|
Length = 309 |
| >gnl|CDD|239785 cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162
V+ + G I+ LD + ++FL H+G+ ++V G Q+++ L G E +Y+ R+
Sbjct: 2 VIKVGGAIIED-DLDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRV 60
Query: 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK 222
TD E + A + + KL + + R+G +R + SG F A
Sbjct: 61 TDPE----TLAVARKVFLEENLKL-----VEALERNGARAR------PITSGVFEAE--- 102
Query: 223 GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALA 282
+D YG G++ V+ + + G L IL++L + SG++LN N A A
Sbjct: 103 -YLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAETPSGQLLNVNADVAAGELARV 161
Query: 283 IEADKLICIID-GPILDESGHLIRFLTL-QEADSLIRQ-------RVKQSEI 325
+E K++ + + G +LD +G I + L +E D L++Q ++K EI
Sbjct: 162 LEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQPWVKYGTKLKIKEI 213
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 248 |
| >gnl|CDD|133644 CHL00202, argB, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 4e-17
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 84 VKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQ 142
V+ EA PY+ RG V+ G + + L I+KDI FL +G++ V+V G +
Sbjct: 8 VQVLSEALPYIQKFRGRIMVIKYGGAAMKNLILKADIIKDILFLSCIGLKIVVVHGGGPE 67
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I+ L + K+ R+TD + ME + M++ K++ + +I +G +
Sbjct: 68 INFWLKQLNISPKFWNGIRVTDKVT----MEI---VEMVLAGKVNK-DLVGSINANGGKA 119
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
VG+ N + A+ D D G GE+++VD + L+ + +++++
Sbjct: 120 ----VGLCGKDANLIVARAS---DKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIASVAAD 172
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIR 317
G+ N N VA A + A+KLI + D P I D + LI L ++EA +L
Sbjct: 173 HDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNS-LISTLNIKEARNLAS 231
Query: 318 QRV 320
+
Sbjct: 232 TGI 234
|
Length = 284 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 7e-17
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 391 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ N L AA CR GV RVHL+ G LLLELF RDG+GT++
Sbjct: 228 ETGALLTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 1e-16
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 433 LFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 492
L RD G V R A++TD+ I+ ++ G + R+ EL++ + SF V
Sbjct: 456 LAARDTSGVKV--------RPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAV 507
Query: 493 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552
E G++ CA+L+ + E+ ++GV + QGQG L+ Y+ +KA + + +F+
Sbjct: 508 AEHHGEVTGCASLY-IYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFV 566
Query: 553 LTTRTADWFKSRGFRECSIEMIPE 576
L TR ++F +GF S ++PE
Sbjct: 567 L-TRVPEFFMKQGFSPTSKSLLPE 589
|
Length = 614 |
| >gnl|CDD|237599 PRK14058, PRK14058, acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 8e-16
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL----- 157
VV I G + P + L D+A L G R VLV G ++++LL G E +++
Sbjct: 3 VVKIGGSVGIDP--EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSG 60
Query: 158 --GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215
RY TD E+L + A I + +L + G ++ VG+S G
Sbjct: 61 VTSRY--TDRETLEVFIMAMALINKQLVERL---------QSLGVNA----VGLSGLDGG 105
Query: 216 FLAAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEV 267
L KRK V +G + TG++++V+ ++ L G L +++ S GE
Sbjct: 106 LLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVAPPALSEEGEP 165
Query: 268 LNCNTYEVATACALAIEADKLICIIDGPIL----DESGHLIRFLTLQEADSL 315
LN + A A A A++A+ L+ + D P L + G LI +T +EA+ L
Sbjct: 166 LNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEEL 217
|
Length = 268 |
| >gnl|CDD|236132 PRK07922, PRK07922, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 8e-15
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 510
R A+ +D+ IK+++ P + L+ + L +A+ F+V E G+++ C AL +
Sbjct: 9 RRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW- 67
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 568
E E+ + V P RG+G G +++ + A LGL +F+LT ++F GF E
Sbjct: 68 EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTFEV-EFFARHGFVE 124
|
Length = 169 |
| >gnl|CDD|239784 cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 2e-13
Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---- 158
VV I G +VS D ++ DIA + G R ++V G +++ L G E K++
Sbjct: 2 VVKIGGSVVSDL--DKVIDDIA---NFGERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSG 56
Query: 159 -RYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFL 217
R R TD E+L + G I I A+L G + VG++ G L
Sbjct: 57 IRSRYTDKETLEVFVMVMGLINKKIVARL---------HSLGVKA----VGLTGLDGRLL 103
Query: 218 AAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLN 269
AKRK +V G + G TG+V+KV+ + LD G L ++S + YS GE LN
Sbjct: 104 EAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGYLPVVSPVAYSEEGEPLN 163
Query: 270 CNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSL---IRQRVKQSEIA 326
+ A A A A++A++LI + D L G +I +T+ +A+SL +K+ +A
Sbjct: 164 VDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEKAGGGMKRKLLA 223
Query: 327 ANYVKAVAE 335
A +AV
Sbjct: 224 A--AEAVEG 230
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). Length = 257 |
| >gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 4e-12
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 101 TFVVIISGEIVSSP-YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159
V+ + G ++ + + ++IA L LGI+ V+V G DKLL+ G EA ++
Sbjct: 2 RIVIKLGGSSLTDKDEIKRLAEEIAKLLALGIKVVVVSGGGGFTDKLLAAYGIEAGFVRH 61
Query: 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA 219
L + A + ++ + R G V + ++ G A
Sbjct: 62 TAGAT--GLVLEAQLAAELNRIVVSLGE---------RLG----ARAVALLLSDGGLPAV 106
Query: 220 KRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS----SGEVLNCNTYEV 275
+ VD ++E L+ G + +++ G + + + ++ +
Sbjct: 107 RLDL---------------VDTEAIKELLEAGVVPVITGFGGENDTGETTTLGRGSSDTL 151
Query: 276 ATACALAIEADKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQ 318
A A A+ ADKLI + +DG P + LI L+ EA+ L+
Sbjct: 152 AALLAEALGADKLIILTDVDGVYTADPRKNPDAKLIPELSYDEAEELLAA 201
|
This family includes kinases that phosphorylate a variety of amino acid substrates, as well as uridylate kinase and carbamate kinase. This family includes: Aspartokinase EC:2.7.2.4, Acetylglutamate kinase EC:2.7.2.8, Glutamate 5-kinase EC:2.7.2.11, Uridylate kinase EC:2.7.4.-, Carbamate kinase EC:2.7.2.2. Length = 230 |
| >gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 5e-12
Identities = 63/250 (25%), Positives = 92/250 (36%), Gaps = 35/250 (14%)
Query: 103 VVIISGEIVSS-PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
V+ G VSS L + + + L G R V+V G QI L G Y R
Sbjct: 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLR 60
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221
ITD E+ A A G ++I A L +HG + L +
Sbjct: 61 ITDRETDALAAMGEGMSNLLIAAAL---------EQHGIKAVP------------LDLTQ 99
Query: 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS---GEVLNCNTYEVATA 278
G + G G++ KV R++ L+ G L ILS G + G + + A
Sbjct: 100 AGFASP-NQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSDSTAAL 158
Query: 279 CALAIEADKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 331
A A++AD+L+ + +DG P L+ LT +EA L + A
Sbjct: 159 LAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKA--AD 216
Query: 332 AVAEEDITCF 341
A I
Sbjct: 217 PAARAGIPVR 226
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. Length = 248 |
| >gnl|CDD|222185 pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 6e-11
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547
+ F V +G+I+ L P + + + V PE RGQG G KLL ++ ++ LG
Sbjct: 3 EHFLVAYDDGEIVGFLRLRPI--GEGAYIGGVAVDPEYRGQGYGSKLLRHLLEE---LGE 57
Query: 548 DMLFLLTTRTA-DWFKSRGFRE 568
LFL A +++ GF
Sbjct: 58 KPLFLFAHPQAKKFYEKLGFEP 79
|
This domain catalyzes N-acetyltransferase reactions. Length = 79 |
| >gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-10
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 493 VEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 551
E +G+++ A+L + E+ + V PE RG+G G LL+ +E+ A LGL +
Sbjct: 1 AEEDGELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALLEALEEYARELGLKRIE 60
Query: 552 LLTT----RTADWFKSRGFR 567
L ++ GF+
Sbjct: 61 LEVLEDNEAAIALYEKLGFK 80
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80 |
| >gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-10
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 490 FYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
F V E +G+I+ A+L P + + V PE RG+G G LL+ E++A G
Sbjct: 1 FLVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAK 60
Query: 549 MLFL 552
L L
Sbjct: 61 RLRL 64
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65 |
| >gnl|CDD|239782 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S+A G A + GA G+ D + + + L G L I+S++G G+
Sbjct: 96 VGLSLADGGMTAVT----QLDPELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQ 151
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
++N N + ATA A + AD L+ + D +LD LI L ++A LI Q V
Sbjct: 152 LMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV 205
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). Length = 252 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 383 EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 442
EQG GG + AA GV+RVH++ G + LLLELF RDG+GTM
Sbjct: 212 EQGIITGGMIPK---------VEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTM 262
Query: 443 VA 444
+
Sbjct: 263 IV 264
|
Length = 265 |
| >gnl|CDD|235306 PRK04531, PRK04531, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDE 299
V + L G + ++++LG + SG++LN N A A++ K+I + G +LD
Sbjct: 119 VEAVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDA 178
Query: 300 SGHLIRFLTLQ-EADSLIRQ 318
G LI + L E D L++Q
Sbjct: 179 DGKLISSINLSTEYDHLMQQ 198
|
Length = 398 |
| >gnl|CDD|223532 COG0456, RimI, Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 6e-06
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-----DWFKSRGFRE 568
G + + V PE RG+G G LLD ++ GL +L R + ++ GF
Sbjct: 92 GHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151
Query: 569 CSIEMIPEERRKRINLSRNSKYYMKKLL 596
I R+ M K+L
Sbjct: 152 VKI------RKNYYADGNGDALLMLKML 173
|
Length = 177 |
| >gnl|CDD|222309 pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 4e-05
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 21/124 (16%)
Query: 458 DLSGIKQIIQPLVES----------GALVRRTDEELLKALDS----FYVVEREGQIIACA 503
D+ + I +ES A R L + L +V ER G+I+ A
Sbjct: 1 DIPALAAIYNDAIESQPALYSPEQIAAWARLLPAVLAERLAEGSITGFVAERGGEIVGFA 60
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL-LTTRTADWFK 562
L P G + + V P RG+G G LLD IE +A G+ L + ++
Sbjct: 61 GLDPD-----GRLDLLYVRPRYRGRGIGRALLDAIEAEARK-GIKRLTTEASLLARPFYL 114
Query: 563 SRGF 566
GF
Sbjct: 115 RLGF 118
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 118 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (108), Expect = 5e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
+ AA R GV+ VH++DG + LLLELF +G+GTM+ D
Sbjct: 241 VEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283
|
Length = 283 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 7e-05
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
AA + GV++VH++DG + LLLELF +G+GTM+
Sbjct: 218 EAALEAL-EGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 1e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ A GV+ H++DG + LLLE+F +G+GTM+
Sbjct: 240 VEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|222199 pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 452 RTAKVTDLSGIKQIIQP--LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF- 508
R DL ++++ VE L +G+++ AL+PF
Sbjct: 3 RPLTEDDLDEFLELLEYAFQVEDSPAEIWEYFRPLLEEGRVLGAFDDGKLVGQLALYPFR 62
Query: 509 -------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 561
+ G + + PE RG+G KLL + G + +L + +
Sbjct: 63 LNVPGKTYP--AGGITGVATYPEYRGRGLMRKLLRRALAEMRERGQPLSYLTPSSYP-IY 119
Query: 562 KSRGFREC 569
+ G+
Sbjct: 120 RRFGYEIA 127
|
This domain catalyzes N-acetyltransferase reactions. Length = 127 |
| >gnl|CDD|233477 TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549
+ + G+++ A + E + I V PE +GQG G LL + +A G++
Sbjct: 33 YLLARIGGKVVGYAGVQIVLDE--AHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNE 90
Query: 550 LFLLTTRTAD-----WFKSRGFRE 568
+F L R ++ +K GF E
Sbjct: 91 IF-LEVRVSNIAAQALYKKLGFNE 113
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database [Protein synthesis, Ribosomal proteins: synthesis and modification]. Length = 131 |
| >gnl|CDD|173920 cd02169, Citrate_lyase_ligase, Citrate lyase ligase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 496 EGQIIACAALFPFFKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 553
G++IA ++ KC + V P+ +G+G K++ + KA G+ LFL
Sbjct: 14 AGELIATGSIA---GNVLKC-----VAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLF 65
Query: 554 T-TRTADWFKSRGFRECSIEMIPEE----RRKRINLSRNSKYYMKKL 595
T + A +F+ GF+E + +E + + Y+K L
Sbjct: 66 TKPKNAKFFRGLGFKE--LANASDEAVLLENGKPGIED----YLKNL 106
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. Length = 297 |
| >gnl|CDD|222116 pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 19/134 (14%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTD-------EELLKALDS-----FYVVEREGQI 499
R DL I ++ V + A+ D E L++ S F V E++G++
Sbjct: 2 RLLTEEDLEAILRLYSEYVHNTAITFEYDVPSEELFERFLESYLSENEYPFGVFEKDGEL 61
Query: 500 IACAALFPFFKEK-CGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLTTRT 557
I A L F + E+ + + +G G KLL+ + + A ++ +
Sbjct: 62 IGYATLRQFDAYRHKAEL-SFYFVKDNNDEGLGRKLLNALIEYAFKEQNIENILACIASN 120
Query: 558 ----ADWFKSRGFR 567
+ K GF
Sbjct: 121 NISAIVFLKKLGFE 134
|
Length = 154 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 609 | |||
| PLN02825 | 515 | amino-acid N-acetyltransferase | 100.0 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 100.0 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 100.0 | |
| COG0548 | 265 | ArgB Acetylglutamate kinase [Amino acid transport | 100.0 | |
| cd04237 | 280 | AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) | 100.0 | |
| CHL00202 | 284 | argB acetylglutamate kinase; Provisional | 100.0 | |
| PLN02512 | 309 | acetylglutamate kinase | 100.0 | |
| PRK00942 | 283 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04250 | 279 | AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase | 100.0 | |
| KOG2436 | 520 | consensus Acetylglutamate kinase/acetylglutamate s | 100.0 | |
| PRK04531 | 398 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04252 | 248 | AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam | 100.0 | |
| cd04236 | 271 | AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA | 100.0 | |
| cd04238 | 256 | AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate | 100.0 | |
| PRK14058 | 268 | acetylglutamate/acetylaminoadipate kinase; Provisi | 100.0 | |
| PRK12352 | 316 | putative carbamate kinase; Reviewed | 100.0 | |
| cd04251 | 257 | AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina | 100.0 | |
| cd04249 | 252 | AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina | 100.0 | |
| TIGR00761 | 231 | argB acetylglutamate kinase. This model describes | 100.0 | |
| cd04241 | 252 | AAK_FomA-like AAK_FomA-like: This CD includes a fo | 100.0 | |
| COG0263 | 369 | ProB Glutamate 5-kinase [Amino acid transport and | 100.0 | |
| PRK12454 | 313 | carbamate kinase-like carbamoyl phosphate syntheta | 100.0 | |
| PRK12686 | 312 | carbamate kinase; Reviewed | 100.0 | |
| PRK12353 | 314 | putative amino acid kinase; Reviewed | 100.0 | |
| TIGR00746 | 310 | arcC carbamate kinase. The seed alignment for this | 100.0 | |
| cd02115 | 248 | AAK Amino Acid Kinases (AAK) superfamily, catalyti | 99.97 | |
| COG0549 | 312 | ArcC Carbamate kinase [Amino acid transport and me | 99.97 | |
| PRK09411 | 297 | carbamate kinase; Reviewed | 99.97 | |
| cd04235 | 308 | AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot | 99.97 | |
| PRK13402 | 368 | gamma-glutamyl kinase; Provisional | 99.97 | |
| PRK12354 | 307 | carbamate kinase; Reviewed | 99.97 | |
| PRK05429 | 372 | gamma-glutamyl kinase; Provisional | 99.96 | |
| cd04256 | 284 | AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase | 99.96 | |
| PTZ00489 | 264 | glutamate 5-kinase; Provisional | 99.96 | |
| PF00696 | 242 | AA_kinase: Amino acid kinase family Match to Gluta | 99.96 | |
| cd04242 | 251 | AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K | 99.96 | |
| PRK12314 | 266 | gamma-glutamyl kinase; Provisional | 99.96 | |
| KOG1154 | 285 | consensus Gamma-glutamyl kinase [Amino acid transp | 99.96 | |
| TIGR01027 | 363 | proB glutamate 5-kinase. Bacterial ProB proteins h | 99.96 | |
| cd04246 | 239 | AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina | 99.94 | |
| cd04261 | 239 | AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina | 99.94 | |
| cd04260 | 244 | AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase | 99.94 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.93 | |
| COG1608 | 252 | Predicted archaeal kinase [General function predic | 99.93 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.92 | |
| cd04234 | 227 | AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) | 99.91 | |
| PRK00358 | 231 | pyrH uridylate kinase; Provisional | 99.9 | |
| cd04239 | 229 | AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik | 99.9 | |
| cd04255 | 262 | AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th | 99.9 | |
| PRK08210 | 403 | aspartate kinase I; Reviewed | 99.89 | |
| PRK14558 | 231 | pyrH uridylate kinase; Provisional | 99.89 | |
| PRK06635 | 404 | aspartate kinase; Reviewed | 99.88 | |
| TIGR00656 | 401 | asp_kin_monofn aspartate kinase, monofunctional cl | 99.88 | |
| PRK08841 | 392 | aspartate kinase; Validated | 99.88 | |
| cd04254 | 231 | AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi | 99.88 | |
| COG1246 | 153 | ArgA N-acetylglutamate synthase and related acetyl | 99.87 | |
| TIGR02075 | 233 | pyrH_bact uridylate kinase. This protein, also cal | 99.86 | |
| TIGR02076 | 221 | pyrH_arch uridylate kinase, putative. This family | 99.86 | |
| cd04253 | 221 | AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP | 99.86 | |
| PRK07431 | 587 | aspartate kinase; Provisional | 99.85 | |
| PRK14557 | 247 | pyrH uridylate kinase; Provisional | 99.82 | |
| cd04240 | 203 | AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin | 99.81 | |
| TIGR00657 | 441 | asp_kinases aspartate kinase. The Lys-sensitive en | 99.8 | |
| PRK14556 | 249 | pyrH uridylate kinase; Provisional | 99.77 | |
| cd04244 | 298 | AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina | 99.69 | |
| PRK06291 | 465 | aspartate kinase; Provisional | 99.65 | |
| PRK08373 | 341 | aspartate kinase; Validated | 99.65 | |
| COG0528 | 238 | PyrH Uridylate kinase [Nucleotide transport and me | 99.63 | |
| PRK07757 | 152 | acetyltransferase; Provisional | 99.6 | |
| PRK10146 | 144 | aminoalkylphosphonic acid N-acetyltransferase; Pro | 99.57 | |
| COG0527 | 447 | LysC Aspartokinases [Amino acid transport and meta | 99.57 | |
| PRK07922 | 169 | N-acetylglutamate synthase; Validated | 99.53 | |
| cd04259 | 295 | AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super | 99.52 | |
| TIGR02078 | 327 | AspKin_pair Pyrococcus aspartate kinase subunit, p | 99.52 | |
| PTZ00330 | 147 | acetyltransferase; Provisional | 99.5 | |
| cd04257 | 294 | AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa | 99.49 | |
| PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylgluta | 99.48 | |
| PRK03624 | 140 | putative acetyltransferase; Provisional | 99.44 | |
| cd04243 | 293 | AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina | 99.44 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 99.43 | |
| PF13527 | 127 | Acetyltransf_9: Acetyltransferase (GNAT) domain; P | 99.43 | |
| KOG3216 | 163 | consensus Diamine acetyltransferase [Amino acid tr | 99.4 | |
| PHA00673 | 154 | acetyltransferase domain containing protein | 99.39 | |
| cd04245 | 288 | AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki | 99.39 | |
| PF13673 | 117 | Acetyltransf_10: Acetyltransferase (GNAT) domain; | 99.38 | |
| PRK10140 | 162 | putative acetyltransferase YhhY; Provisional | 99.38 | |
| TIGR02382 | 191 | wecD_rffC TDP-D-fucosamine acetyltransferase. This | 99.38 | |
| PLN02706 | 150 | glucosamine 6-phosphate N-acetyltransferase | 99.37 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 99.36 | |
| PF13523 | 152 | Acetyltransf_8: Acetyltransferase (GNAT) domain; P | 99.36 | |
| PRK09491 | 146 | rimI ribosomal-protein-alanine N-acetyltransferase | 99.36 | |
| PRK09831 | 147 | putative acyltransferase; Provisional | 99.35 | |
| PRK10975 | 194 | TDP-fucosamine acetyltransferase; Provisional | 99.34 | |
| PRK09084 | 448 | aspartate kinase III; Validated | 99.33 | |
| PRK05925 | 440 | aspartate kinase; Provisional | 99.33 | |
| TIGR02406 | 157 | ectoine_EctA L-2,4-diaminobutyric acid acetyltrans | 99.33 | |
| PRK08961 | 861 | bifunctional aspartate kinase/diaminopimelate deca | 99.32 | |
| PF13420 | 155 | Acetyltransf_4: Acetyltransferase (GNAT) domain; P | 99.31 | |
| COG1247 | 169 | Sortase and related acyltransferases [Cell envelop | 99.3 | |
| TIGR01575 | 131 | rimI ribosomal-protein-alanine acetyltransferase. | 99.28 | |
| cd04258 | 292 | AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki | 99.28 | |
| PF13508 | 79 | Acetyltransf_7: Acetyltransferase (GNAT) domain; P | 99.27 | |
| PRK10314 | 153 | putative acyltransferase; Provisional | 99.27 | |
| KOG3139 | 165 | consensus N-acetyltransferase [General function pr | 99.26 | |
| PRK09034 | 454 | aspartate kinase; Reviewed | 99.24 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 99.24 | |
| cd04247 | 306 | AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa | 99.22 | |
| PRK10514 | 145 | putative acetyltransferase; Provisional | 99.2 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.17 | |
| KOG3396 | 150 | consensus Glucosamine-phosphate N-acetyltransferas | 99.17 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.16 | |
| COG0456 | 177 | RimI Acetyltransferases [General function predicti | 99.16 | |
| TIGR03585 | 156 | PseH pseudaminic acid biosynthesis N-acetyl transf | 99.15 | |
| COG3153 | 171 | Predicted acetyltransferase [General function pred | 99.15 | |
| PLN02551 | 521 | aspartokinase | 99.14 | |
| COG2054 | 212 | Uncharacterized archaeal kinase related to asparto | 99.1 | |
| PRK10151 | 179 | ribosomal-protein-L7/L12-serine acetyltransferase; | 99.1 | |
| PRK10562 | 145 | putative acetyltransferase; Provisional | 99.09 | |
| PRK15130 | 186 | spermidine N1-acetyltransferase; Provisional | 99.08 | |
| PRK01346 | 411 | hypothetical protein; Provisional | 99.05 | |
| PHA01807 | 153 | hypothetical protein | 99.03 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.02 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 99.02 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 99.01 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.0 | |
| PRK13688 | 156 | hypothetical protein; Provisional | 98.99 | |
| PF13302 | 142 | Acetyltransf_3: Acetyltransferase (GNAT) domain; P | 98.99 | |
| TIGR00124 | 332 | cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP | 98.96 | |
| PRK10809 | 194 | ribosomal-protein-S5-alanine N-acetyltransferase; | 98.93 | |
| COG2153 | 155 | ElaA Predicted acyltransferase [General function p | 98.68 | |
| KOG3397 | 225 | consensus Acetyltransferases [General function pre | 98.61 | |
| KOG3235 | 193 | consensus Subunit of the major N alpha-acetyltrans | 98.52 | |
| KOG3234 | 173 | consensus Acetyltransferase, (GNAT) family [Genera | 98.51 | |
| KOG3138 | 187 | consensus Predicted N-acetyltransferase [General f | 98.46 | |
| PF08445 | 86 | FR47: FR47-like protein; InterPro: IPR013653 Prote | 98.45 | |
| KOG2488 | 202 | consensus Acetyltransferase (GNAT) domain-containi | 98.43 | |
| cd04301 | 65 | NAT_SF N-Acyltransferase superfamily: Various enzy | 98.4 | |
| COG3393 | 268 | Predicted acetyltransferase [General function pred | 98.3 | |
| TIGR01211 | 522 | ELP3 histone acetyltransferase, ELP3 family. The S | 98.29 | |
| COG1670 | 187 | RimL Acetyltransferases, including N-acetylases of | 98.21 | |
| PF14542 | 78 | Acetyltransf_CG: GCN5-related N-acetyl-transferase | 98.19 | |
| COG3981 | 174 | Predicted acetyltransferase [General function pred | 98.17 | |
| cd04248 | 304 | AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase S | 98.12 | |
| PF13718 | 196 | GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z | 98.09 | |
| PRK09181 | 475 | aspartate kinase; Validated | 98.06 | |
| COG3053 | 352 | CitC Citrate lyase synthetase [Energy production a | 97.99 | |
| PF04768 | 170 | DUF619: Protein of unknown function (DUF619); Inte | 97.73 | |
| COG3818 | 167 | Predicted acetyltransferase, GNAT superfamily [Gen | 97.68 | |
| PF12746 | 265 | GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S | 97.52 | |
| PF12568 | 128 | DUF3749: Acetyltransferase (GNAT) domain; InterPro | 97.5 | |
| COG2388 | 99 | Predicted acetyltransferase [General function pred | 97.42 | |
| COG1444 | 758 | Predicted P-loop ATPase fused to an acetyltransfer | 97.41 | |
| KOG4144 | 190 | consensus Arylalkylamine N-acetyltransferase [Gene | 97.14 | |
| COG4552 | 389 | Eis Predicted acetyltransferase involved in intrac | 97.07 | |
| KOG0456 | 559 | consensus Aspartate kinase [Amino acid transport a | 97.04 | |
| PF00765 | 182 | Autoind_synth: Autoinducer synthetase; InterPro: I | 96.98 | |
| COG0454 | 156 | WecD Histone acetyltransferase HPA2 and related ac | 96.88 | |
| PF04958 | 342 | AstA: Arginine N-succinyltransferase beta subunit; | 96.84 | |
| TIGR03694 | 241 | exosort_acyl putative PEP-CTERM/exosortase system- | 96.8 | |
| PF08444 | 89 | Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt | 96.47 | |
| PRK13834 | 207 | putative autoinducer synthesis protein; Provisiona | 96.41 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 96.19 | |
| TIGR03245 | 336 | arg_AOST_alph arginine/ornithine succinyltransfera | 96.07 | |
| TIGR03243 | 335 | arg_catab_AOST arginine and ornithine succinyltran | 95.98 | |
| COG5630 | 495 | ARG2 Acetylglutamate synthase [Amino acid transpor | 95.89 | |
| PRK10456 | 344 | arginine succinyltransferase; Provisional | 95.74 | |
| KOG4135 | 185 | consensus Predicted phosphoglucosamine acetyltrans | 95.72 | |
| TIGR03244 | 336 | arg_catab_AstA arginine N-succinyltransferase. In | 95.69 | |
| COG3916 | 209 | LasI N-acyl-L-homoserine lactone synthetase [Signa | 95.65 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 95.26 | |
| COG5628 | 143 | Predicted acetyltransferase [General function pred | 95.06 | |
| PF06852 | 181 | DUF1248: Protein of unknown function (DUF1248); In | 95.02 | |
| COG1243 | 515 | ELP3 Histone acetyltransferase [Transcription / Ch | 93.98 | |
| KOG2036 | 1011 | consensus Predicted P-loop ATPase fused to an acet | 93.09 | |
| PF01233 | 162 | NMT: Myristoyl-CoA:protein N-myristoyltransferase, | 93.02 | |
| PF01853 | 188 | MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz i | 92.79 | |
| cd04264 | 99 | DUF619-NAGS DUF619 domain of various N-acetylgluta | 92.17 | |
| KOG2535 | 554 | consensus RNA polymerase II elongator complex, sub | 92.12 | |
| COG3138 | 336 | AstA Arginine/ornithine N-succinyltransferase beta | 91.41 | |
| PF02799 | 190 | NMT_C: Myristoyl-CoA:protein N-myristoyltransferas | 91.08 | |
| cd04265 | 99 | DUF619-NAGS-U DUF619 domain of various N-acetylglu | 90.63 | |
| PLN03238 | 290 | probable histone acetyltransferase MYST; Provision | 90.46 | |
| PF13880 | 70 | Acetyltransf_13: ESCO1/2 acetyl-transferase | 89.81 | |
| PTZ00064 | 552 | histone acetyltransferase; Provisional | 88.05 | |
| PLN03239 | 351 | histone acetyltransferase; Provisional | 86.87 | |
| COG3375 | 266 | Uncharacterized conserved protein [Function unknow | 86.78 | |
| KOG2779 | 421 | consensus N-myristoyl transferase [Lipid transport | 86.65 | |
| PF04377 | 128 | ATE_C: Arginine-tRNA-protein transferase, C termin | 86.41 | |
| COG2401 | 593 | ABC-type ATPase fused to a predicted acetyltransfe | 86.23 | |
| PRK01305 | 240 | arginyl-tRNA-protein transferase; Provisional | 85.83 | |
| PLN00104 | 450 | MYST -like histone acetyltransferase; Provisional | 85.65 | |
| TIGR03019 | 330 | pepcterm_femAB FemAB-related protein, PEP-CTERM sy | 84.78 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 81.72 | |
| PF05301 | 120 | Mec-17: Touch receptor neuron protein Mec-17; Inte | 81.64 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 80.87 | |
| PF13444 | 101 | Acetyltransf_5: Acetyltransferase (GNAT) domain | 80.63 | |
| PHA01733 | 153 | hypothetical protein | 80.62 |
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-98 Score=818.78 Aligned_cols=508 Identities=79% Similarity=1.238 Sum_probs=472.1
Q ss_pred HHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccC
Q 007275 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (609)
Q Consensus 83 ~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rv 162 (609)
||+|||+++|||++||||+||||+||+++.++.+.++++||+.|+..|+++||||||||||+..++++|++++|++|+|+
T Consensus 1 ~v~~fr~a~pYI~~~rgktfVIk~gG~~l~~~~~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~~~gi~~~f~~G~RV 80 (515)
T PLN02825 1 FVRWFREAWPYIQGHRGSTFVVVISGEVVAGPHLDNILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYVGAYRI 80 (515)
T ss_pred ChhHHHhhhHHHHHHCCCEEEEEECchhhcCchHHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHHcCCCceeeCCccc
Confidence 79999999999999999999999999999887899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHH
Q 007275 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (609)
Q Consensus 163 t~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~ 242 (609)
||+++|+++++++|.+|..|++.||+|++|+.|+++|.++|++.+++++.||||++++|.|+++++|+||+|+|++||.+
T Consensus 81 Td~~~L~~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~ 160 (515)
T PLN02825 81 TDSAALQASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVS 160 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHH
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCCCccccccCHHHHHHHHHhhchh
Q 007275 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQ 322 (609)
Q Consensus 243 ~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~~~lI~~it~~e~~~l~~~~~~~ 322 (609)
.|+.+|+.|.|||++|++++++|+++|+|+|++|+++|.+|+|||||||||+++++.++++|++++.+|++.+++++.+|
T Consensus 161 ~i~~~L~~g~Ipvisplg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~~~~~~g~li~~l~~~e~~~li~~~~~~ 240 (515)
T PLN02825 161 RIKERLDSNCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQ 240 (515)
T ss_pred HHHHHHhCCCeEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcceecCCCCCcCcCCHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999888889
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCccc-------ccccccccCCcccCCCCCCccccccccccccchhh
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFS-------ERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~ 395 (609)
|+|||+++|||.+++.+....-.. .+..+.++. ......|.++++|.+|.| .+.+|||++|++|++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 314 (515)
T PLN02825 241 SEIAANYVKAVGGEDYSYSLGLDS-----VNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNG-LSGEQGFAIGGEERLS 314 (515)
T ss_pred chhhhhhhhhcccccccccccccc-----ccccccccccccccccccccccccccccccCccc-ccccccccccchhhch
Confidence 999999999999997653211000 000011111 112234667777777655 3678999999999999
Q ss_pred cccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCcCCHHHHHHHHhhhHhhccC
Q 007275 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGAL 475 (609)
Q Consensus 396 ~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~ 475 (609)
+...+++||.+|.+||++||+|+||+|++.+|+||+||||+||+||+|..|+|+.||+++.+|++.|.++++++...++.
T Consensus 315 ~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~~~e~IR~At~eDi~~I~~Li~~lee~g~l 394 (515)
T PLN02825 315 RLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGIL 394 (515)
T ss_pred hhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccChHhhheeCCHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH
Q 007275 476 VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT 555 (609)
Q Consensus 476 ~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~ 555 (609)
..++.+.+..++..|+|+++|++++||+.++++.+...++|.+++|+|+|||+|+|++||++++++|+++|++++++.|+
T Consensus 395 v~rs~e~le~ei~~f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt 474 (515)
T PLN02825 395 VRRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT 474 (515)
T ss_pred cCCCHHHHHhcCCcEEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 88999999999989999999999999999998877788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 556 RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 556 ~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
++.+||+++||+.++.+.+|..++..|+++|+|++|||+|+
T Consensus 475 ~a~~fY~k~GF~~~~~~~lp~~~~~~yn~~r~sk~~~k~l~ 515 (515)
T PLN02825 475 RTADWFVRRGFSECSIESLPEARRKRINLSRGSKYYMKKLL 515 (515)
T ss_pred cHHHHHHHCCCEEeChhhCCHHHHhhcCccCCcEEEEEecC
Confidence 99999999999999999999999999999999999999984
|
|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=639.07 Aligned_cols=428 Identities=45% Similarity=0.751 Sum_probs=394.1
Q ss_pred HHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccC
Q 007275 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (609)
Q Consensus 83 ~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rv 162 (609)
|+++||||+|||++|||+++|||+||++++++++..++++|+.|+..|.++||||||||+|++.++++|++++|++|+|+
T Consensus 1 ~~~~~~~~~~~i~~~~~~~~ViK~GG~~~~~~~~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~~g~~~~~~~G~Rv 80 (429)
T TIGR01890 1 FVAWFREAAPYINAHRGKTFVVGLGGELVEGGNLGNIVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYHRGLRV 80 (429)
T ss_pred ChhHHhhhhHHHHHhCCCEEEEEEChhhccCccHHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHHcCCCceeeCCccc
Confidence 78999999999999999999999999999887789999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHH
Q 007275 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (609)
Q Consensus 163 t~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~ 242 (609)
|++++|+++.+++|.+|..|++.|+ +++-..+++.+++++.|++++.+++.++.+++|+||+|+|+.+|.+
T Consensus 81 T~~~~l~~~~~~~g~vn~~l~~~l~---------~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~ 151 (429)
T TIGR01890 81 TDEASLEQAQQAAGTLRLAIEARLS---------MSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTE 151 (429)
T ss_pred CCHHHHHHHHHHhChHHHHHHHHHH---------hcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHH
Confidence 9999999996569999999999864 3321112334578999999999999887788999999999999999
Q ss_pred HHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHHHHHHHhhch
Q 007275 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVK 321 (609)
Q Consensus 243 ~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~~~l~~~~~~ 321 (609)
.|+.+|+.|+|||++|++++.+|+.+|+|+|.+|++||.+|+|++|||+|||+|+. +++++|++|+.+|+++++....
T Consensus 152 ~l~~ll~~g~ipvi~pi~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~g~~i~~i~~~~~~~l~~~~~- 230 (429)
T TIGR01890 152 GIRRQLDAGSIVLLSPLGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPDGTLAAELSPQEVESLAERLG- 230 (429)
T ss_pred HHHHHHHCCCeEEECCcccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCcccCCHHHHHHHHHhcc-
Confidence 99999999999999999999999999999999999999999999999999999985 4699999999999998875411
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
| || |.
T Consensus 231 ------------------------------------------------------~-~~--------------------~~ 235 (429)
T TIGR01890 231 ------------------------------------------------------S-ET--------------------TR 235 (429)
T ss_pred ------------------------------------------------------C-CC--------------------cH
Confidence 1 31 58
Q ss_pred HHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCcCCHHHHHHHHhhhHhhccCccCCHH
Q 007275 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 481 (609)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e 481 (609)
+||++|..|++.||++|||+||+.+++|+.|||+++|.||+|..++|..||+++.+|++.|.+++++....++..++..+
T Consensus 236 ~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d~y~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~ 315 (429)
T TIGR01890 236 RLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFESIRQATIDDIGGIAALIRPLEEQGILVRRSRE 315 (429)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEeccchhheEECCHHHHHHHHHHHHHHHHcCCchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777778888
Q ss_pred HHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHH
Q 007275 482 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 561 (609)
Q Consensus 482 ~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fY 561 (609)
.+..++..+++++.|++++||+.+.++.+...++|..++|+|+|||+|+|++||++++++|+++|++.+++.++.+.+||
T Consensus 316 ~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~~a~~fY 395 (429)
T TIGR01890 316 YLEREISEFSIIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTTRTGHWF 395 (429)
T ss_pred HHHhhcCcEEEEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeecchHHHH
Confidence 88888888899999999999999987666678999999999999999999999999999999999999988887889999
Q ss_pred HHCCCeEeeeecchhHhhhhcccCCCceeEEeec
Q 007275 562 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 562 ek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
+++||+.++..++|..++..|+++|++++|||+|
T Consensus 396 ~k~GF~~~g~~~l~~~~~~~~~~~r~~~~~~~~~ 429 (429)
T TIGR01890 396 RERGFQTASVDELPEARRKLYNYQRNSKILMKRL 429 (429)
T ss_pred HHCCCEECChhhCCHHHHHHhcccccCceeeecC
Confidence 9999999999999999999999999999999986
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate. |
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-72 Score=618.97 Aligned_cols=434 Identities=46% Similarity=0.757 Sum_probs=394.0
Q ss_pred hhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCC
Q 007275 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (609)
Q Consensus 80 ~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g 159 (609)
...|+++||+++|||++||++++|||+||++|+++++++++++|+.|+..|+++||||||||+|+..+.++|+++++++|
T Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~VIk~GG~~l~~~~~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~G 85 (441)
T PRK05279 6 STEFVDWFRHSAPYINAHRGKTFVIMLGGEAIAHGNFSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRYHKG 85 (441)
T ss_pred hhHHHHHHHHHhHHHHHhCCCEEEEEECchhccChhHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHcCCCceecCC
Confidence 45699999999999999999999999999999887888999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCC-cceeEEEeecCCceeeeeecCcccCcCCcceeeEee
Q 007275 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (609)
Q Consensus 160 ~rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~-~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~ 238 (609)
+|+|++++|+.+.++.+.+|..+++.|+. |++. +++...+++.+++++.++++++.++.|+||+|+++.
T Consensus 86 ~RvT~~~~l~~~~~~~g~v~~~l~~~l~~----------g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~ 155 (441)
T PRK05279 86 LRVTDAAALECVKQAAGELRLDIEARLSM----------GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRR 155 (441)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHhc----------cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEE
Confidence 99999999999955579999999998643 4331 122445788899999999998878889999999999
Q ss_pred eCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHHHHHHH
Q 007275 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 239 v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~~~l~~ 317 (609)
+|.+.|+.||++|+|||++|++.+++|+.+|+|+|.+|++||.+|+||+|||+||+||+. +++++|++++.+++++++.
T Consensus 156 v~~~~i~~ll~~g~ipV~~~i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~~~~~i~~i~~~~~~~~~~ 235 (441)
T PRK05279 156 IDAEAIRRQLDSGAIVLLSPLGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLE 235 (441)
T ss_pred EeHHHHHHHHHCCCeEEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCchhhhCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999985 5799999999999988875
Q ss_pred hhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcc
Q 007275 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (609)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~ 397 (609)
.-. .|.+ +| |
T Consensus 236 ~~~--------------------------~~~~------------------------~g-g------------------- 245 (441)
T PRK05279 236 ALE--------------------------DGDY------------------------NS-G------------------- 245 (441)
T ss_pred hhh--------------------------cCCC------------------------Cc-c-------------------
Confidence 210 0012 23 4
Q ss_pred cCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCcCCHHHHHHHHhhhHhhccCcc
Q 007275 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVR 477 (609)
Q Consensus 398 ~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~ 477 (609)
|.+||++|..++++|+++|||+|++.+++|+.|||+.+|.||+|..+.|+.||+++.+|++.|.+++++.....+..+
T Consensus 246 --M~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~~y~~IR~at~~D~~~I~~L~~~~~~~~~~~~ 323 (441)
T PRK05279 246 --TARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGILELIRPLEEQGILVR 323 (441)
T ss_pred --HHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecCchHHeEeCCHHHHHHHHHHHHHHHHcCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988777777677
Q ss_pred CCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHH
Q 007275 478 RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557 (609)
Q Consensus 478 ~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a 557 (609)
++.+.+..+...+|++++|++++||+.+.+......++|..++|+|+|||+|+|++||++++++|+++|++.+++.+.++
T Consensus 324 ~~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~~~a 403 (441)
T PRK05279 324 RSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLTTRT 403 (441)
T ss_pred cCHHHHhcccCcEEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEecchH
Confidence 88888888888899999999999999888655556789999999999999999999999999999999999998888889
Q ss_pred HHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeec
Q 007275 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 558 ~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
.+||+++||+.++...+|..++..|++.|+|++|+|+|
T Consensus 404 ~~fY~k~GF~~~g~~~~~~~~~~~y~~~r~~~~~~~~~ 441 (441)
T PRK05279 404 AHWFLERGFVPVDVDDLPEAKRQLYNYQRRSKVLVKDL 441 (441)
T ss_pred HHHHHHCcCEECChhhCcHHHHHhhCcccCceeeeecC
Confidence 99999999999999999999999999999999999986
|
|
| >COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-53 Score=425.01 Aligned_cols=259 Identities=38% Similarity=0.618 Sum_probs=243.3
Q ss_pred cCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-HHHH
Q 007275 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAA 175 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~ 175 (609)
++|++|||+||+++.+++ +++++++|++|+..|.++||||||||||+..++++|++++|++|+|+||+++|+++ |++.
T Consensus 1 ~~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~~gie~~f~~glRvTd~~tlevv~mvl~ 80 (265)
T COG0548 1 RGKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFVKGLRVTDAETLEVVEMVLG 80 (265)
T ss_pred CCceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHHcCCCCeeeCCEEcCCHHHHHHHHHHHH
Confidence 579999999999999987 89999999999999999999999999999999999999999999999999999999 7888
Q ss_pred HHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEE
Q 007275 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (609)
Q Consensus 176 g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPV 255 (609)
|.+|..|++. |+++|.+ ++++++.||+|+.|++.+...++|+||+|+|+++|.+.|+.+|++|+|||
T Consensus 81 G~vNk~iva~---------l~~~g~~----avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpV 147 (265)
T COG0548 81 GTVNKEIVAR---------LSKHGGQ----AVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPV 147 (265)
T ss_pred HHHHHHHHHH---------HHHhCCc----ceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceE
Confidence 8999999997 4788876 89999999999999999988889999999999999999999999999999
Q ss_pred EcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCC-Cc--cccccCHHHHHHHHHhhchhhhhHhhhhhh
Q 007275 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDES-GH--LIRFLTLQEADSLIRQRVKQSEIAANYVKA 332 (609)
Q Consensus 256 i~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~-~~--lI~~it~~e~~~l~~~~~~~~~~~~~~~~~ 332 (609)
++|++.+.+|+.+|+|+|++|+++|.+|+|++||+|||++|+..+ +. +|+.++.+|++++++++.
T Consensus 148 iapia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~------------ 215 (265)
T COG0548 148 IAPIAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGI------------ 215 (265)
T ss_pred EecceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCC------------
Confidence 999999999999999999999999999999999999999998543 33 999999999999987642
Q ss_pred hhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHH
Q 007275 333 VAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412 (609)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~ 412 (609)
++ | | |.+||++|+.||+
T Consensus 216 -----------------i~------------------------~-G---------------------Mi~Kv~~a~~A~~ 232 (265)
T COG0548 216 -----------------IT------------------------G-G---------------------MIPKVEAALEALE 232 (265)
T ss_pred -----------------cc------------------------C-c---------------------cHHHHHHHHHHHH
Confidence 22 2 5 9999999999999
Q ss_pred cCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 413 ~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.||++|||+||+.++++|.|||+++++||+|.
T Consensus 233 ~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 233 SGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred hCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 99999999999999999999999999999986
|
|
| >cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-52 Score=427.44 Aligned_cols=278 Identities=51% Similarity=0.796 Sum_probs=253.8
Q ss_pred HHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCcc
Q 007275 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (609)
Q Consensus 82 ~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~r 161 (609)
+|+++||+++|||++||++++|||+||++|.++++++++++|+.|++.|+++||||||||++++++.++|+++++++|+|
T Consensus 1 ~~~~~~~~~~~yi~~~~~~~~VIKlGG~ai~~~~l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~~gi~~~~~~G~R 80 (280)
T cd04237 1 QFVDWFREAAPYINAHRGKTFVIAFGGEAVAHPNFDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRYHRGLR 80 (280)
T ss_pred ChHHHHHHHhHHHHHhCCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCccccCCcC
Confidence 59999999999999999999999999999988788999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCC-cceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeC
Q 007275 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 240 (609)
Q Consensus 162 vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~-~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~ 240 (609)
+|++++|+++.++++.++..+++.|++ +++. +++..++++.+++++.+++++++++.|+|++|+++.+|
T Consensus 81 vT~~~~l~~~~~~~g~v~~~l~~~l~~----------~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~ 150 (280)
T cd04237 81 ITDAAALECVKEAAGAVRLEIEALLSM----------GLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRID 150 (280)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHh----------hccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEc
Confidence 999999999965579999999998643 3331 12234688889999999999888889999999999999
Q ss_pred HHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHHHHHHHhh
Q 007275 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQR 319 (609)
Q Consensus 241 ~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~~~l~~~~ 319 (609)
.+.|++||++|+|||++|.+.+.+|+.+|+|+|.+|++||.+|+||+|+|+||+||+. +++++|++++.+|+++++..+
T Consensus 151 ~~~i~~lL~~g~ipv~~~~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~~~~i~~i~~~e~~~l~~~~ 230 (280)
T cd04237 151 ADAIRRQLDQGSIVLLSPLGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETG 230 (280)
T ss_pred HHHHHHHHHCCCEEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCccccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999986 479999999999999998653
Q ss_pred chhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccC
Q 007275 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (609)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~ 399 (609)
. + -+| |
T Consensus 231 ~-----------------------------~-----------------------~~g-g--------------------- 236 (280)
T cd04237 231 A-----------------------------L-----------------------LTN-D--------------------- 236 (280)
T ss_pred C-----------------------------C-----------------------CCC-C---------------------
Confidence 2 0 023 5
Q ss_pred CHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
|.+||++|..|+++|++++||+|++.+++|+.|||+++|.||+|
T Consensus 237 M~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 237 TARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 99999999999999999999999999999999999999999986
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >CHL00202 argB acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-51 Score=420.73 Aligned_cols=274 Identities=27% Similarity=0.450 Sum_probs=252.0
Q ss_pred hhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC
Q 007275 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (609)
Q Consensus 80 ~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~ 158 (609)
..+++++||+++|||++||++++|||+||+++.++. .+.+++||+.|+..|.++|||||||++++..++++|+++++++
T Consensus 4 ~~~~~~~~~~~~pyi~~~~~~~~VIk~gG~~~~~~~l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~ 83 (284)
T CHL00202 4 NDERVQVLSEALPYIQKFRGRIMVIKYGGAAMKNLILKADIIKDILFLSCIGLKIVVVHGGGPEINFWLKQLNISPKFWN 83 (284)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEEChHHhcCcchHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHCCCCCEeEC
Confidence 457899999999999999999999999999998766 4699999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEe
Q 007275 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (609)
Q Consensus 159 g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~ 237 (609)
|+|+|++++|+.+ +++++.+|..+++. |+++|++ ++++++.|++++++++. +++|++++|+++
T Consensus 84 G~rvT~~~~l~~~~~~l~g~ln~~lv~~---------L~~~Gv~----av~l~~~d~~~i~a~~~---~~~d~~~~G~i~ 147 (284)
T CHL00202 84 GIRVTDKVTMEIVEMVLAGKVNKDLVGS---------INANGGK----AVGLCGKDANLIVARAS---DKKDLGLVGEIQ 147 (284)
T ss_pred CcccCCHHHHHHHHHHHhhHHHHHHHHH---------HHhCCCC----eeeeeeccCCEEEEEeC---CCcccccceeEE
Confidence 9999999999998 77899999999997 4788887 99999999999999974 557899999999
Q ss_pred eeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC----CCccccccCHHHHH
Q 007275 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEAD 313 (609)
Q Consensus 238 ~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~----~~~lI~~it~~e~~ 313 (609)
.++.+.|+.+|+.|+|||++|++.+.+|+.+|+|+|.+|+++|.+|+||+|+|+||++|++. .+++|++++.+|++
T Consensus 148 ~v~~~~i~~ll~~g~iPVi~~~~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~~d~~~~i~~i~~~e~~ 227 (284)
T CHL00202 148 QVDPQLIDMLLEKNYIPVIASVAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNSLISTLNIKEAR 227 (284)
T ss_pred ecCHHHHHHHHHCCCEEEECCCccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCCCCCCCccccccHHHHH
Confidence 99999999999999999999998999999999999999999999999999999999999853 37899999998888
Q ss_pred HHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccch
Q 007275 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (609)
Q Consensus 314 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~ 393 (609)
+++..+ +.+| |
T Consensus 228 ~l~~~g-----------------------------------------------------~~tG-G--------------- 238 (284)
T CHL00202 228 NLASTG-----------------------------------------------------IISG-G--------------- 238 (284)
T ss_pred HHHhcC-----------------------------------------------------CCCC-C---------------
Confidence 886321 1133 5
Q ss_pred hhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 394 ~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|.+||++|..|+++|++++||+||+.++++|.|+|++++.||+|.
T Consensus 239 ------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 239 ------MIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred ------HHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 999999999999999999999999999999999999999999985
|
|
| >PLN02512 acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=408.66 Aligned_cols=277 Identities=29% Similarity=0.481 Sum_probs=253.5
Q ss_pred chhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCCh-HHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccccc
Q 007275 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL 157 (609)
Q Consensus 79 ~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l-~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~ 157 (609)
+...|+++||+++|||++||++++||||||++++++++ ..++++|+.|+..|.++|||||||++++..++++|++++++
T Consensus 27 ~~~~~~~~~r~~~pyi~~~~~~tiVIKlGGs~i~d~~~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~~~~gi~~~~~ 106 (309)
T PLN02512 27 TNLSRVDILSEALPFIQRFRGKTVVVKYGGAAMKDPELKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWLKKVGIEPQFK 106 (309)
T ss_pred chHHHHHHHHHHhHHHHHHCCCeEEEEECCeeccChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCCcCC
Confidence 56799999999999999999999999999999998774 67999999999999999999999999999999999999999
Q ss_pred CCccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeE
Q 007275 158 GRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV 236 (609)
Q Consensus 158 ~g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v 236 (609)
+|+|+|+.+.++.+ +++++++|..+++. |+++|++ ++++++.|++|+++++++ +++|++++|++
T Consensus 107 ~G~rvT~~~~lei~~~~l~g~ln~~lv~~---------L~~~Gv~----av~l~g~d~~~i~a~~~~--~~~~~~~~G~i 171 (309)
T PLN02512 107 NGLRVTDAETMEVVEMVLVGKVNKSLVSL---------INKAGGT----AVGLSGKDGRLLRARPSP--NSADLGFVGEV 171 (309)
T ss_pred CCCcCCCHHHHHHHHHHHhhHHHHHHHHH---------HHHcCCC----eEEeehhhCCEEEEEEcC--cCcccccccee
Confidence 99999999999998 77899999999986 5889988 899999999999999862 44689999999
Q ss_pred eeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC----CCCccccccCHHHH
Q 007275 237 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEA 312 (609)
Q Consensus 237 ~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~----~~~~lI~~it~~e~ 312 (609)
+.++.+.|+.+|+.|+|||++|++.++.|+.+++|+|.+|++||.+|+||+|+|+|||||++ +++++|++++.+|+
T Consensus 172 ~~v~~~~i~~lL~~g~IPVi~~~~~d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~~~~~lI~~i~~~e~ 251 (309)
T PLN02512 172 TRVDPTVLRPLVDDGHIPVIATVAADEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGV 251 (309)
T ss_pred eecCHHHHHHHHhCCCEEEEeCceECCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCCCCcCCCcccCHHHH
Confidence 99999999999999999999999998899999999999999999999999999999999985 35899999999988
Q ss_pred HHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccc
Q 007275 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (609)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~ 392 (609)
++++..+ ..+| |
T Consensus 252 ~~l~~~~-----------------------------------------------------~vtG-G-------------- 263 (309)
T PLN02512 252 RKLIADG-----------------------------------------------------KIAG-G-------------- 263 (309)
T ss_pred HHHHhCC-----------------------------------------------------CCCC-c--------------
Confidence 8876431 1133 5
Q ss_pred hhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|.+||++|..+++.|++++||+||+.+++++.++|++++.||+|.+
T Consensus 264 -------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~ 309 (309)
T PLN02512 264 -------MIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMITG 309 (309)
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEeC
Confidence 9999999999999999999999999999899999999999999863
|
|
| >PRK00942 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-47 Score=391.52 Aligned_cols=277 Identities=34% Similarity=0.538 Sum_probs=253.1
Q ss_pred hhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC
Q 007275 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (609)
Q Consensus 80 ~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~ 158 (609)
...++.+||+++|||++||++++|||+||++|++++ +..++++|+.|++.|.++|||||+|++++.+++++++.+++.+
T Consensus 4 ~~~~~~~~r~~~~yi~~~~~~~iViK~GGs~l~~~~~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~~~g~~~~~~~ 83 (283)
T PRK00942 4 ALEKAEVLSEALPYIQRFMGKTIVIKYGGNAMTDEELKEAFARDIVLLKQVGINPVVVHGGGPQIDELLKKLGIESEFVN 83 (283)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEEChHHhcCcchHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHHHCCCCcEeeC
Confidence 457999999999999999999999999999998877 6789999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEe
Q 007275 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (609)
Q Consensus 159 g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~ 237 (609)
|+|+|+.+.++.. ++++|+++..+++. |+++|++ ++++++.+++++++++. .+++|++++|+++
T Consensus 84 g~~~t~~~~l~~~~~a~~G~l~~~i~~~---------L~~~Gv~----a~~l~~~~~~~~ta~~~--~~~~~~~~~g~i~ 148 (283)
T PRK00942 84 GLRVTDAETMEVVEMVLAGKVNKELVSL---------INKHGGK----AVGLSGKDGGLITAKKL--EEDEDLGFVGEVT 148 (283)
T ss_pred CEecCCHHHHHHHHHHHcCchHHHHHHH---------HHhCCCC----ccceeeccCCEEEEEEC--CCCCCCccccceE
Confidence 9999999999987 55558999999875 5788988 89999999999999986 6778999999999
Q ss_pred eeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC-CCccccccCHHHHHHHH
Q 007275 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLI 316 (609)
Q Consensus 238 ~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~-~~~lI~~it~~e~~~l~ 316 (609)
.+|.+.|+.+|+.|.|||++|++++.+|+++|+|+|.+|++||.+|+||+|+|+|||||++. ++++|++++.+|++++.
T Consensus 149 ~i~~~~l~~ll~~g~vpVv~~~~~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~~~~i~~i~~~e~~~~~ 228 (283)
T PRK00942 149 PVNPALLEALLEAGYIPVISPIGVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELI 228 (283)
T ss_pred EECHHHHHHHHHCCCEEEEcCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCCCcccccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999865 59999999999988876
Q ss_pred HhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhc
Q 007275 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (609)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~ 396 (609)
..+. .+| |
T Consensus 229 ~~~~-----------------------------------------------------~tg-g------------------ 236 (283)
T PRK00942 229 EDGV-----------------------------------------------------ITG-G------------------ 236 (283)
T ss_pred HcCC-----------------------------------------------------CCC-c------------------
Confidence 4311 123 4
Q ss_pred ccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 397 ~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||++|..+++.|+.+|||+|+..+++||.++|++++.||+|.++
T Consensus 237 ---m~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 283 (283)
T PRK00942 237 ---MIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283 (283)
T ss_pred ---hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEecC
Confidence 99999999999999999999999999998899999999999999864
|
|
| >cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=381.93 Aligned_cols=269 Identities=32% Similarity=0.524 Sum_probs=246.2
Q ss_pred HHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCH
Q 007275 87 FREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDS 165 (609)
Q Consensus 87 ~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~ 165 (609)
+|++.|||++||++++||||||+++++++ ...++++|+.|+..|.++|||||+|++++..+.++++++++.+|+|+|++
T Consensus 2 ~~~~~~yi~~~~~~~~ViKlGGs~i~~~~~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~~g~~~~~~~g~r~t~~ 81 (279)
T cd04250 2 LIEALPYIQKFRGKTVVIKYGGNAMKDEELKESFARDIVLLKYVGINPVVVHGGGPEINEMLKKLGIESEFVNGLRVTDE 81 (279)
T ss_pred hhhhhHHHHHHcCCEEEEEEChHHhcCccHHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHHCCCCCEeECCeecCCH
Confidence 79999999999999999999999999876 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCc---ccCcCCcceeeEeeeCH
Q 007275 166 ESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDV 241 (609)
Q Consensus 166 ~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~---~~~~d~g~~G~v~~v~~ 241 (609)
++++.+ ++++|++|..+++. |+++|++ ++++++.+++++++++.++ ++++||+++|+++.++.
T Consensus 82 ~~~~~~~~~~~g~ln~~l~~~---------L~~~Gv~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~ 148 (279)
T cd04250 82 ETMEIVEMVLVGKVNKEIVSL---------INRAGGK----AVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNP 148 (279)
T ss_pred HHHHHHHHHHcCchHHHHHHH---------HHHcCCC----cceeecCCCCEEEEEECcccccCCCcccCcccceEEEcH
Confidence 999887 45558999999886 5888988 8999999999999999876 67889999999999999
Q ss_pred HHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC----CCccccccCHHHHHHHHH
Q 007275 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 242 ~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~----~~~lI~~it~~e~~~l~~ 317 (609)
+.|+++|+.|.|||+++++.++.|+.+++|+|.+|+++|.+|+||+|+|+|||||++. ++++|++++.+|++++..
T Consensus 149 ~~i~~ll~~g~IPVi~~~~~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~ 228 (279)
T cd04250 149 ELLETLLEAGYIPVIAPVGVGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIA 228 (279)
T ss_pred HHHHHHHHCCCeEEEcCCccCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCCCccccccCCHHHHHHHHH
Confidence 9999999999999999998888899999999999999999999999999999999853 389999999999888764
Q ss_pred hhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcc
Q 007275 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (609)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~ 397 (609)
.+ ..+| |
T Consensus 229 ~~-----------------------------------------------------~~tG-g------------------- 235 (279)
T cd04250 229 DG-----------------------------------------------------IISG-G------------------- 235 (279)
T ss_pred cC-----------------------------------------------------CCCC-c-------------------
Confidence 31 1134 5
Q ss_pred cCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 398 ~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
|.+||++|..++++|+.+|||+||..+++++.++|++++.||+|
T Consensus 236 --m~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 236 --MIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred --hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 99999999999999999999999999999999999999999986
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A |
| >KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=396.82 Aligned_cols=437 Identities=41% Similarity=0.584 Sum_probs=375.8
Q ss_pred chhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC
Q 007275 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (609)
Q Consensus 79 ~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~ 158 (609)
...+++++++|++|||..||++++||+.+|.++....+..++++++.|+..|.++|||||++||+++.+...++++.+.+
T Consensus 74 s~~~~v~~~~e~l~yi~~~~~q~fvV~~~g~~~~t~~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~~~~ie~~y~~ 153 (520)
T KOG2436|consen 74 SSDTTVRILRESLPYITSFRDQKFVVIKSGEAISTSLLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLAERGIEPEYVD 153 (520)
T ss_pred CChhHHHHHHHHHHHHHHhcCceEEEEecccccccchHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHcCCCccccc
Confidence 66889999999999999999999999999999865558999999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeec--CCceeeeeecCcccCcCCcceee
Q 007275 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVA--SGNFLAAKRKGVVDGVDYGATGE 235 (609)
Q Consensus 159 g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~--d~~~l~ak~~~~~~~~d~g~~G~ 235 (609)
++|+|++..|+++ +..+++-|..+... |+++|.. +.+.+.- .++|+.++++++.++.+|+++|+
T Consensus 154 ~~RvTda~t~q~~~~~~~~E~n~~lv~n---------L~~~g~~----ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~ge 220 (520)
T KOG2436|consen 154 GYRVTDAHTLQAAKESVSLEANLNLVIN---------LSQLGTR----ARPSSSGVRVGNFFPADRNGVLDGEDYGLVGE 220 (520)
T ss_pred ceecccHHHHHHhhhcchhhhhhHHHHH---------HHHhhce----eccccccccccceeecccccccccceeeeecc
Confidence 9999999999998 44677777666554 6788866 3333333 27799999999999999999999
Q ss_pred EeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEec-ccccCCCCccccccCHHHHHH
Q 007275 236 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADS 314 (609)
Q Consensus 236 v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTD-vdgv~~~~~lI~~it~~e~~~ 314 (609)
|.++|.+.|+.+++.|.+|+++.++.+++|+++|||+|++|.++|.+|+|+++++++| +.++++++..++.++.+|...
T Consensus 221 i~~vd~d~i~~l~~~G~mp~L~sla~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~ge~~S~l~l~~e~~ 300 (520)
T KOG2436|consen 221 IKKVDVDRIRHLLDAGSMPLLRSLAATASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKENGEDISSLILQEEDA 300 (520)
T ss_pred cceechhhhhhhhhCCCchhehhhcccCccceEEeeHHHHhhHHHhccCcceeEEecccccccccCcccccccccchhHh
Confidence 9999999999999999999999999999999999999999999999999999999999 567889999999999999999
Q ss_pred HHHhhchhhhhHhhhhhhhhcccccccCCCCC-Ccccc--cCCCCCc-ccccccccccCCcccCCCCCCccccccccccc
Q 007275 315 LIRQRVKQSEIAANYVKAVAEEDITCFGHSDS-IGSVY--SSQNGKT-FSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 390 (609)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~ 390 (609)
+++...+|+++|++++++|.+.....+..+-. ++.++ -.+.... ..+++..+|++|.++..|+++|+..|+|+.++
T Consensus 301 ~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~gv~~~k~~sl~~~~~~~al~~ 380 (520)
T KOG2436|consen 301 GLRKPSQQKNIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGGVGINKGNSLISQSFKRALDL 380 (520)
T ss_pred hhhhhhhhcccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCceeeecCcccccchhhhhcch
Confidence 99999999999999999999988774443321 22221 1111111 11558889999999999999999999999999
Q ss_pred cchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCcCCHHHHHHHHhhhH
Q 007275 391 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470 (609)
Q Consensus 391 ~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~~D~~~I~~L~~~~~ 470 (609)
+++++|+++.++++.+|.+.|..+++++|..||+.++.++++.|.+.++||+. .+.+..++.+..+|+|.|....++..
T Consensus 381 ~~~~~rln~~lse~i~a~~~~~~~i~~~~~~D~~~e~V~~ldkf~~~~~~~~~-~~V~d~ifn~~~~dfp~i~wr~r~~~ 459 (520)
T KOG2436|consen 381 EEYIDRLNGSLSELIAAGDYCGGAIKTYELSDGTNEGVLYLDKFAVSGMGTGS-SDVSDGIFNVMVEDFPEILWRSRPLN 459 (520)
T ss_pred HHHHHHhhchHHHHHHHHHHhccceEEEEccCCCcccceeeeecccCCccccc-chhhHHHHHHHHHhhhhheeeccccc
Confidence 99999999999999999999999999999999999999999999999999988 67888899999999998888877766
Q ss_pred hhccC-ccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHH
Q 007275 471 ESGAL-VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (609)
Q Consensus 471 ~~~~~-~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL 535 (609)
..... ..++...+. ..+.+++.+.+++++.|+.+.++. ++..+.|.++.|+++.+.+++
T Consensus 460 ~~~~w~f~rs~g~L~-~~~~~lfwyg~~~i~~~a~~~~~~-----~v~~~~~~~d~~~s~~n~k~~ 519 (520)
T KOG2436|consen 460 EVNKWYFRRSEGSLR-ALDFKLFWYGEGQIIKCAALFQFF-----EVAAMSVASDIRPSWQNDKLL 519 (520)
T ss_pred ccceEEEeccHHHHh-ccCcEEEEecCcHHHHHHHhhhhh-----HHHHhhhccccCccccCCCCC
Confidence 65543 334444443 557778888899999999988653 677889999999988776653
|
|
| >PRK04531 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=372.51 Aligned_cols=333 Identities=21% Similarity=0.271 Sum_probs=267.5
Q ss_pred CCCCchhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcc
Q 007275 75 YNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEA 154 (609)
Q Consensus 75 g~~~~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~ 154 (609)
|+.+++.+|+++||++.|| +++|||+||+++.+ .++.++++|+.|+..|.++||||||||||+..++++|+++
T Consensus 18 ~~~~e~~~~l~~F~~~~~~------~~~VIKiGG~~l~~-~~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~~~gie~ 90 (398)
T PRK04531 18 ASAKEISQYLKRFSQLDAE------RFAVIKVGGAVLRD-DLEALASSLSFLQEVGLTPIVVHGAGPQLDAELDAAGIEK 90 (398)
T ss_pred CChhhhHHHHHHHhCcCCC------cEEEEEEChHHhhc-CHHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHHHcCCCc
Confidence 5666788888888888888 89999999999974 4799999999999999999999999999999999999999
Q ss_pred cccCCccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCccee
Q 007275 155 KYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATG 234 (609)
Q Consensus 155 ~~~~g~rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G 234 (609)
++++|.|+|++++|+++.++.+.+|..|++
T Consensus 91 ~~v~G~RVTd~~tl~vv~~~l~~vn~~lv~-------------------------------------------------- 120 (398)
T PRK04531 91 ETVNGLRVTSPEALAIVRKVFQRSNLDLVE-------------------------------------------------- 120 (398)
T ss_pred EEECCEecCCHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 999999999999999995555577766643
Q ss_pred eEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCH-HHH
Q 007275 235 EVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEA 312 (609)
Q Consensus 235 ~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~-~e~ 312 (609)
.|+.+|+.|.|||++|++.+++|+++|+|+|.+|++||.+|+|++|||+||++|+. .+|++|+.++. +++
T Consensus 121 --------~I~~~L~~g~IPVlsplg~~~~G~~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~g~~i~~i~~~~e~ 192 (398)
T PRK04531 121 --------AVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDADGKLISSINLSTEY 192 (398)
T ss_pred --------HHHHHHHCCCEEEEeCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCCCcccCCHHHHH
Confidence 27889999999999999999999999999999999999999999999999999985 57999999997 577
Q ss_pred HHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccc
Q 007275 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (609)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~ 392 (609)
+.++..+. ++ | |
T Consensus 193 ~~l~~~~~-----------------------------vt------------------------g-G-------------- 204 (398)
T PRK04531 193 DHLMQQPW-----------------------------IN------------------------G-G-------------- 204 (398)
T ss_pred HHHHhcCC-----------------------------CC------------------------c-c--------------
Confidence 77754311 22 3 5
Q ss_pred hhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccccccc-ccccCCcCCHHHHHHHHhhhHh
Q 007275 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVE 471 (609)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~-~IR~a~~~D~~~I~~L~~~~~~ 471 (609)
|.+||++|..+++ +++++|+++++.+++|+.|||+++|.||+|.....+ .......=|.+.+.+++....
T Consensus 205 -------M~~KL~~a~~al~-~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g~~i~~~~~~~~~d~~~l~~ll~~sf- 275 (398)
T PRK04531 205 -------MKLKLEQIKELLD-RLPLESSVSITSPSDLAKELFTHKGSGTLVRRGERILRATDWDELDLERLNLLIESSF- 275 (398)
T ss_pred -------HHHHHHHHHHHHh-CCCcEEEEEecCCCHHHHHHccCCCCCeEEecCCceeeeCChhhcCHHHHHHHHhhhc-
Confidence 9999999999996 466799999999999999999999999999976443 233344448888888873322
Q ss_pred hccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 007275 472 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 551 (609)
Q Consensus 472 ~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~ 551 (609)
... ..+.|.+. ...+-++.++..-|++.+. +++...+|..|+|.+.-|+.|+++.++..+.+.. +.++
T Consensus 276 ---~r~-~~~~y~~~-~~~~~~y~~~~y~~~Aiv~--~~~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~-----~~L~ 343 (398)
T PRK04531 276 ---GRT-LKPDYFDT-TQLLRAYVSENYRAAAILT--ETGGGPYLDKFAVLDDARGEGLGRAVWNVMREET-----PQLF 343 (398)
T ss_pred ---ccc-hHHHHhcc-CCceEEEEeCCCcEEEEEe--cCCCceEeEEEEEccchhhcChHHHHHHHHHhhC-----CceE
Confidence 211 12333333 2334444455565666665 3467899999999999999999999999888764 3456
Q ss_pred EEe---HHHHHHH
Q 007275 552 LLT---TRTADWF 561 (609)
Q Consensus 552 l~t---~~a~~fY 561 (609)
+.+ ++...||
T Consensus 344 Wrsr~~n~~~~Wy 356 (398)
T PRK04531 344 WRSRHNNTINKFY 356 (398)
T ss_pred EEcCCCCCcccee
Confidence 654 2445665
|
|
| >cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=343.34 Aligned_cols=244 Identities=26% Similarity=0.397 Sum_probs=214.7
Q ss_pred EEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHHHHHH
Q 007275 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM 181 (609)
Q Consensus 102 iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i~~~ 181 (609)
.|||+||+++++. +++++++|+.|++.|.++|||||||+|++..++++|++++|++|.|+|+++.|+.+..+++.+|..
T Consensus 1 ~ViKiGG~~~~~~-l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~g~RvT~~~~l~~v~~al~~vn~~ 79 (248)
T cd04252 1 AVIKVGGAIIEDD-LDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRVTDPETLAVARKVFLEENLK 79 (248)
T ss_pred CEEEEChhhhhcc-HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCcEeeCCcccCCHHHHHHHHHHHHHHHHH
Confidence 3899999999874 899999999999999999999999999999999999999999999999999999996666799999
Q ss_pred HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCCcc
Q 007275 182 IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261 (609)
Q Consensus 182 l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~ 261 (609)
+++. |.++|++ ++++++ + ++.+++ .+++|+||+|+++++|.+.|+.+|+.|+|||++|++.
T Consensus 80 iv~~---------l~~~g~~----a~~l~~--~-~~~a~~---~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p~~~ 140 (248)
T cd04252 80 LVEA---------LERNGAR----ARPITS--G-VFEAEY---LDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAE 140 (248)
T ss_pred HHHH---------HHhCCCC----cccccC--c-eEEEEE---CcCccCCccCceeeECHHHHHHHHHCCCeEEECCceE
Confidence 9987 4778887 777763 3 557776 4678999999999999999999999999999999999
Q ss_pred CCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCH-HHHHHHHHhhchhhhhHhhhhhhhhccccc
Q 007275 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDIT 339 (609)
Q Consensus 262 ~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~-~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 339 (609)
+++|+++|+|+|++|+++|.+|+|++|||+||++|+. .++++|++++. +++++++..+.
T Consensus 141 ~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~g~~i~~i~~~~~~~~l~~~~~------------------- 201 (248)
T cd04252 141 TPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQPW------------------- 201 (248)
T ss_pred CCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCCCCcccccCHHHHHHHHHHcCC-------------------
Confidence 9999999999999999999999999999999999986 45899999997 46777764311
Q ss_pred ccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHc--CCCe
Q 007275 340 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR--GVQR 417 (609)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~--Gv~~ 417 (609)
++ | | |.+||++|..+.+. |+..
T Consensus 202 ----------vt------------------------g-G---------------------M~~Kl~~~~~~~~~~~~~~~ 225 (248)
T cd04252 202 ----------VK------------------------Y-G---------------------TKLKIKEIKELLDTLPRSSS 225 (248)
T ss_pred ----------cC------------------------C-c---------------------hHHHHHHHHHHHHhCCCceE
Confidence 22 3 5 99999988888776 6667
Q ss_pred EEEeecccccchhhhhhhcCCCcccc
Q 007275 418 VHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 418 v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
+||++ +++|+.|||+++|.||+|
T Consensus 226 v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 226 VSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred EEEEC---CchHHHHHhcCCCCCccC
Confidence 88887 588999999999999986
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th |
| >cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=342.39 Aligned_cols=255 Identities=18% Similarity=0.206 Sum_probs=219.2
Q ss_pred CCCCCchhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCC
Q 007275 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGH 152 (609)
Q Consensus 74 ~g~~~~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~ 152 (609)
+++++|+++|.+.|..+.|+= ..+.+|||+||+++.+++ +++++++|++|+..|.++||||||||+++..+.
T Consensus 13 ~~~~~e~~~~l~~f~~~~~~~---~~~f~VIK~GG~~~~~~~~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~---- 85 (271)
T cd04236 13 GGDPREARYWLTQFQIAMPND---WPAFAVLEVDHSVFRSLEMVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS---- 85 (271)
T ss_pred CCCHHHHHHHHHHhhccCCCC---CCCEEEEEEChhhhcCchhHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc----
Confidence 357789999999999987651 237899999999997654 899999999999999999999999999998776
Q ss_pred cccccCCccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCc
Q 007275 153 EAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231 (609)
Q Consensus 153 ~~~~~~g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g 231 (609)
+.++. .+ +... .+|..|++. |+++|++ ++++++. ++++.+++ ..|+|
T Consensus 86 ~~~~~------------~~~~v~~-~~n~~Lv~~---------L~~~G~~----A~gl~g~-~~~i~a~~-----~~d~g 133 (271)
T cd04236 86 DLELQ------------AARSRLV-KDCKTLVEA---------LQANSAA----AHPLFSG-ESVLQAEE-----PEPGA 133 (271)
T ss_pred CCcch------------heehhHH-HHHHHHHHH---------HHhCCCC----eeeecCc-cceEEEEE-----cccCC
Confidence 22221 12 3344 788888886 4788987 8999887 68999987 25889
Q ss_pred ceeeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCH-
Q 007275 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL- 309 (609)
Q Consensus 232 ~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~- 309 (609)
++|+|++||.+.|+.+|+.|+|||++|++++.+|+++|+|+|.+|++||.+|+|+||||+||++|+. .++++|++++.
T Consensus 134 ~vG~V~~Vd~~~I~~lL~~g~IPVisplg~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~g~lI~~l~~~ 213 (271)
T cd04236 134 SKGPSVSVDTELLQWCLGSGHIPLVCPIGETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQKHKVLPQVHLP 213 (271)
T ss_pred ccceEEEECHHHHHHHHhCCCeEEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCCCCCccccCcH
Confidence 9999999999999999999999999999999999999999999999999999999999999999984 57999999995
Q ss_pred HHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccccccc
Q 007275 310 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 389 (609)
Q Consensus 310 ~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g 389 (609)
+|++.|++++. +++ ||.+|
T Consensus 214 ~e~~~li~~g~-----------------------------i~g-------------------------Gm~~k------- 232 (271)
T cd04236 214 ADLPSLSDAEW-----------------------------LSE-------------------------TEQNR------- 232 (271)
T ss_pred HHHHHHHhCCE-----------------------------EcC-------------------------Ceeec-------
Confidence 89999987743 433 63222
Q ss_pred ccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 390 ~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
.+|+++|+.++..|++ |||++ +++|+.||||+.|.||+|
T Consensus 233 -----------i~ki~~~l~~l~~g~s-v~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 233 -----------IQDIATLLNALPSMSS-AVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred -----------hHHHHHHHHhcccCCe-EEEeC---hHHHHHHHhccCCCCCcC
Confidence 7899999999999999 99998 678999999999999987
|
Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF). |
| >cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=338.48 Aligned_cols=253 Identities=31% Similarity=0.512 Sum_probs=230.9
Q ss_pred EEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHH-HHHH
Q 007275 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA-GGIR 179 (609)
Q Consensus 102 iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~-g~i~ 179 (609)
+||||||+++++++ +..++++|+.|+..|.++|||||+|++++.+++++++..++.++.|+|+++.++.+..++ +.+|
T Consensus 1 ~ViKlGGs~l~~~~~~~~~~~~i~~l~~~g~~~VlVhG~g~~~~~~~~~~~~~~~~~~~~r~t~~~~l~~~~~a~~g~ln 80 (256)
T cd04238 1 VVIKYGGSAMKDEELKEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGLRVTDKETMEIVEMVLAGKVN 80 (256)
T ss_pred CEEEEChHHhcCccHHHHHHHHHHHHHHCCCCEEEECCCcHHHHHHHHHCCCCCEeECCeecCCHHHHHHHHHHHcCchH
Confidence 59999999999876 689999999999999999999999999999999999999999999999999999885555 8999
Q ss_pred HHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC
Q 007275 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (609)
Q Consensus 180 ~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~ 259 (609)
..+++. |+++|++ ++++++.+++++++++.+ .+++|++|+|+++.++.+.|+.+|++|+|||++|+
T Consensus 81 ~~i~~~---------L~~~Gv~----a~~l~~~~~~~~~~~~~~-~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~~ 146 (256)
T cd04238 81 KELVSL---------LNRAGGK----AVGLSGKDGGLIKAEKKE-EKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPI 146 (256)
T ss_pred HHHHHH---------HHhCCCC----CCCcccccCCEEEEEECC-CCCCCcccccceEEECHHHHHHHHHCCCEEEECCc
Confidence 999886 5788988 899999999999999988 88899999999999999999999999999999999
Q ss_pred ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCC-CccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccc
Q 007275 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDES-GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 338 (609)
Q Consensus 260 ~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~-~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~ 338 (609)
+.+.+|+++|+|+|.+|+++|.+|+||+|+|+|||+|++.+ +++|++++.+|+++++..+
T Consensus 147 ~~~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~~------------------- 207 (256)
T cd04238 147 AVDEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDDPGSLISELTPKEAEELIEDG------------------- 207 (256)
T ss_pred EECCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCCCCCccccCCHHHHHHHHHcC-------------------
Confidence 98889999999999999999999999999999999998654 8999999998888876421
Q ss_pred cccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeE
Q 007275 339 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 418 (609)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v 418 (609)
..+| | |.+||++|..+++.|+.+|
T Consensus 208 ----------------------------------~~~g-g---------------------m~~Kl~~a~~~~~~g~~~v 231 (256)
T cd04238 208 ----------------------------------VISG-G---------------------MIPKVEAALEALEGGVRKV 231 (256)
T ss_pred ----------------------------------CCCC-C---------------------hHHHHHHHHHHHHhCCCEE
Confidence 1123 4 9999999999999999899
Q ss_pred EEeecccccchhhhhhhcCCCcccc
Q 007275 419 HLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 419 ~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
+|+||+.+++|+.+||++++.||+|
T Consensus 232 ~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 232 HIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred EEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999999878999986
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=331.50 Aligned_cols=250 Identities=31% Similarity=0.428 Sum_probs=220.2
Q ss_pred eEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC---C--ccCCCHHHHHHHHHHH
Q 007275 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAA 175 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~---g--~rvt~~~~l~~~~~~~ 175 (609)
++|||+||+++.++ ..++++|+.|+..|.++|||||||++++..++++++++++++ | .|+|++++|+.+..+.
T Consensus 1 ~~ViK~GG~~l~~~--~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~g~~~rvt~~~~l~~~~~a~ 78 (268)
T PRK14058 1 MIVVKIGGSVGIDP--EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSGVTSRYTDRETLEVFIMAM 78 (268)
T ss_pred CEEEEEChHHhhCc--HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHHcCCCceEEeCCCCCceEeCCHHHHHHHHHHH
Confidence 58999999999874 578999999999999999999999999999999999999987 6 8999999999986666
Q ss_pred HHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecC----cccC----cCCcceeeEeeeCHHHHHHH
Q 007275 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG----VVDG----VDYGATGEVKKVDVTRMRER 247 (609)
Q Consensus 176 g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~----~~~~----~d~g~~G~v~~v~~~~I~~L 247 (609)
+++|..+++. |+++|++ ++++++.+.+++++++.. +.++ +|++|+|+++.++.+.|+.+
T Consensus 79 ~~ln~~lv~~---------L~~~Gv~----a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~l 145 (268)
T PRK14058 79 ALINKQLVER---------LQSLGVN----AVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLL 145 (268)
T ss_pred HHHHHHHHHH---------HHhCCCC----ccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHH
Confidence 6999999986 5788987 899999999888877642 2333 68999999999999999999
Q ss_pred HhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC----CCCccccccCHHHHHHHHHhhchhh
Q 007275 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQS 323 (609)
Q Consensus 248 L~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~----~~~~lI~~it~~e~~~l~~~~~~~~ 323 (609)
|+.|+|||++|++++.+|+.+|+|+|.+|+++|.+|+||+|+|+|||||++ +++++|++++.+|++++...
T Consensus 146 l~~g~iPVi~~~~~~~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~~----- 220 (268)
T PRK14058 146 LKAGYLPVVAPPALSEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEELSKA----- 220 (268)
T ss_pred HHCCCEEEEeCceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCCCCcCccCcCHHHHHHHhhc-----
Confidence 999999999999888889999999999999999999999999999999985 34889999998888776421
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
.+| | |.+|
T Consensus 221 --------------------------------------------------~tG-g---------------------M~~K 228 (268)
T PRK14058 221 --------------------------------------------------AGG-G---------------------MKKK 228 (268)
T ss_pred --------------------------------------------------cCC-c---------------------cHHH
Confidence 123 5 9999
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|++|..++++|++++||+||+.+++|+.+| +|.||+|.+
T Consensus 229 l~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l---~G~GT~I~~ 267 (268)
T PRK14058 229 VLMAAEAVEGGVGRVIIADANVDDPISAAL---AGEGTVIVN 267 (268)
T ss_pred HHHHHHHHHcCCCEEEEEcCCCcchHHHHh---CCCceEEec
Confidence 999999999999999999999999887777 456999865
|
|
| >PRK12352 putative carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=334.82 Aligned_cols=259 Identities=17% Similarity=0.216 Sum_probs=213.8
Q ss_pred CeEEEEeCCcccCCC-----------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHH
Q 007275 100 GTFVVIISGEIVSSP-----------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 100 k~iVIKlGGsvl~~~-----------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (609)
|+||||+||++|.++ ++..+++||++|+..|+++||||||||||+.++.++++++++ +|.|+|+.+
T Consensus 3 k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~~~~~~~~-~g~rvt~~~-- 79 (316)
T PRK12352 3 ELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHER-EGLPLTPLA-- 79 (316)
T ss_pred cEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCccccc-CCCCCCCHH--
Confidence 799999999999662 247899999999999999999999999999999999999999 699999986
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCC---cceeEEEeecCCcee-eeeecCcc-----------cCcCCcce
Q 007275 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS---RWHEVGVSVASGNFL-AAKRKGVV-----------DGVDYGAT 233 (609)
Q Consensus 169 ~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~---~~~av~l~~~d~~~l-~ak~~~~~-----------~~~d~g~~ 233 (609)
..+.+++|.+..++++.|++ .|.++|.+. -++++++++.|++|+ .+||.|++ +++|++|+
T Consensus 80 ~~v~~~~g~i~~~i~~~L~~-----~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~ 154 (316)
T PRK12352 80 NCVADTQGGIGYLIQQALNN-----RLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFV 154 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEe
Confidence 45577787777788877754 577777332 123578899999999 57777875 45678775
Q ss_pred ee--------------EeeeCHHHHHHHHhCCCeEEEc-----CCccCCCCc----EEEecHHHHHHHHHHHcCCCEEEE
Q 007275 234 GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSGE----VLNCNTYEVATACALAIEADKLIC 290 (609)
Q Consensus 234 G~--------------v~~v~~~~I~~LL~~G~IPVi~-----~~~~~~~ge----~~~id~D~lAa~lA~~L~Ad~LIi 290 (609)
+. |+.||.+.|+.||++|+|||++ |+..+..|+ .+|+|+|.+|+++|.+|+||+|||
T Consensus 155 ~d~g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~ 234 (316)
T PRK12352 155 EDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVI 234 (316)
T ss_pred ecCCCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEE
Confidence 55 9999999999999999997776 766665555 556999999999999999999999
Q ss_pred EecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccc
Q 007275 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (609)
Q Consensus 291 LTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
|||++|++ +++++|++++.+|+++++.++.
T Consensus 235 LTDV~GV~~d~~~~~~~li~~lt~~e~~~li~~g~--------------------------------------------- 269 (316)
T PRK12352 235 TTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGH--------------------------------------------- 269 (316)
T ss_pred EeCchhhccCCCCCCcccccccCHHHHHHHHhcCC---------------------------------------------
Confidence 99999984 3578999999999999986431
Q ss_pred cccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
+.+| | |.+||++|..|++.|+.++||++ +.. +.++|++. .||.|..
T Consensus 270 -------i~~G-g---------------------M~pKl~aA~~al~~Gv~~v~I~~---~~~-i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 270 -------FPPG-S---------------------MLPKIIASLTFLEQGGKEVIITT---PEC-LPAALRGE-TGTHIIK 315 (316)
T ss_pred -------cCCC-C---------------------CHHHHHHHHHHHHhCCCeEEEcc---hHH-HHHHHcCC-CCeEEEe
Confidence 1123 4 99999999999999999999997 343 66777766 8999853
|
|
| >cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=325.11 Aligned_cols=244 Identities=34% Similarity=0.471 Sum_probs=215.6
Q ss_pred EEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC---C--ccCCCHHHHHHHHHHHH
Q 007275 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAAG 176 (609)
Q Consensus 102 iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~---g--~rvt~~~~l~~~~~~~g 176 (609)
+||||||+++++ +++++++|+.| |.++|||||||++++..++++++++++++ | .|+|++++|+.+..+.+
T Consensus 1 ~VIKlGGs~l~~--~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~G~~~Rvt~~~~l~~~~~a~~ 75 (257)
T cd04251 1 IVVKIGGSVVSD--LDKVIDDIANF---GERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETLEVFVMVMG 75 (257)
T ss_pred CEEEEChHHhhC--hHHHHHHHHHc---CCCEEEECCCHHHHHHHHHHcCCCcEEEeCCCCCccccCCHHHHHHHHHHHH
Confidence 599999999985 67899999987 89999999999999999999999999985 7 49999999999966669
Q ss_pred HHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeec--------CcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 177 ~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~--------~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
.+|..+++. |+++|++ ++++++.+.+++++++. +.....|++|+|+++.+|.+.|+.+|
T Consensus 76 ~ln~~iv~~---------L~~~Gi~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll 142 (257)
T cd04251 76 LINKKIVAR---------LHSLGVK----AVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALL 142 (257)
T ss_pred HHHHHHHHH---------HHhCCCC----ceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHH
Confidence 999999986 4788887 89999999999988875 22234589999999999999999999
Q ss_pred hCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCCCccccccCHHHHHHHHHhhchhhhhHhh
Q 007275 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~~~lI~~it~~e~~~l~~~~~~~~~~~~~ 328 (609)
+.|+|||++|++.+.+|+++|+|+|.+|+++|.+|+||+|+|+||++|++.++++|++++.+|+++++..
T Consensus 143 ~~g~vpVi~~~~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~~~~i~~i~~~e~~~l~~~---------- 212 (257)
T cd04251 143 DAGYLPVVSPVAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEK---------- 212 (257)
T ss_pred hCCCeEEEeCcEECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeCCcccCccCHHHHHHHHhh----------
Confidence 9999999999999989999999999999999999999999999999999888999999999888887621
Q ss_pred hhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHH
Q 007275 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (609)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~ 408 (609)
+ +| | |.+||++|.
T Consensus 213 ---------------------~------------------------~g-g---------------------m~~Kl~aa~ 225 (257)
T cd04251 213 ---------------------A------------------------GG-G---------------------MKRKLLAAA 225 (257)
T ss_pred ---------------------C------------------------CC-c---------------------hHHHHHHHH
Confidence 1 23 5 999999999
Q ss_pred HHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 409 ~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
.++++|++++||+||+.++.+. .++. |.||.|
T Consensus 226 ~a~~~gv~~v~i~~g~~~~~l~-~~l~--g~gT~i 257 (257)
T cd04251 226 EAVEGGVREVVIGDARADSPIS-SALN--GGGTVI 257 (257)
T ss_pred HHHHcCCCEEEEecCCCccHHH-HHHc--CCCcCC
Confidence 9999999999999999998654 4443 469875
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). |
| >cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=324.85 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=222.1
Q ss_pred EEEEeCCcccCCCC-hHHHHHHHHHHH-hCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHH-HHHHHH
Q 007275 102 FVVIISGEIVSSPY-LDPILKDIAFLH-HLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM-EAAGGI 178 (609)
Q Consensus 102 iVIKlGGsvl~~~~-l~~l~~~Ia~L~-~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~-~~~g~i 178 (609)
+||||||+++++++ +++++++|+.+. ..|.++|||||+|++++.+++++++++++.+|.|+|+.+.++.+. ++.+++
T Consensus 1 ~ViK~GGs~l~~~~~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~~~~ 80 (252)
T cd04249 1 LVIKLGGALLETEAALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYITGALAGTA 80 (252)
T ss_pred CEEEEChHHhcChhhHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCCEEECCEecCCHHHHHHHHHHHcCcc
Confidence 58999999998765 889999999875 467899999999999999999999999999999999999999984 456899
Q ss_pred HHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcC
Q 007275 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (609)
Q Consensus 179 ~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~ 258 (609)
|..+++.+ .++|++ ++++++.+++++++++.+ .|++++|+++.++.+.|+.+|+.|+|||+++
T Consensus 81 n~~lv~~l---------~~~Gv~----a~~l~~~~~~~~~~~~~~----~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~ 143 (252)
T cd04249 81 NKQLMAQA---------IKAGLK----PVGLSLADGGMTAVTQLD----PELGAVGKATANDPSLLNDLLKAGFLPIISS 143 (252)
T ss_pred cHHHHHHH---------HhCCCC----ceeeeccCCCEEEEEEcC----CCCCcccceEEEcHHHHHHHHHCCCEEEECC
Confidence 99998874 588987 899999999999999864 5899999999999999999999999999999
Q ss_pred CccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhccc
Q 007275 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEED 337 (609)
Q Consensus 259 ~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~ 337 (609)
++.+++|+++|+|+|.+|+++|.+|+|| +||+|||+|++ .++++|++++.+|+++++..+.
T Consensus 144 ~g~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~g~----------------- 205 (252)
T cd04249 144 IGADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV----------------- 205 (252)
T ss_pred CEECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCCcCccccCHHHHHHHHhcCC-----------------
Confidence 9999999999999999999999999999 78999999986 4689999999998888764321
Q ss_pred ccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCe
Q 007275 338 ITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQR 417 (609)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~ 417 (609)
+ +| | |.+|+++|..+++.|+.+
T Consensus 206 ------------~------------------------~g-G---------------------m~~kl~~a~~~~~~~~~~ 227 (252)
T cd04249 206 ------------I------------------------TD-G---------------------MIVKVNAALDAAQSLRRG 227 (252)
T ss_pred ------------C------------------------cC-C---------------------cHHHHHHHHHHHHhCCCe
Confidence 1 23 5 999999999999999888
Q ss_pred EEEeecccccchhhhhhhcCCCcccc
Q 007275 418 VHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 418 v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
+||++|+.++ .|.++|++++.||+|
T Consensus 228 v~I~~g~~~~-~l~~~l~g~~~GT~I 252 (252)
T cd04249 228 IDIASWQYPE-QLTALLAGEPVGTKI 252 (252)
T ss_pred EEEEeCCCcc-HHHHHHcCCCCCcCC
Confidence 9999999888 578999999999986
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). |
| >TIGR00761 argB acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=306.76 Aligned_cols=200 Identities=32% Similarity=0.504 Sum_probs=183.0
Q ss_pred eEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-HHHHHHHH
Q 007275 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIR 179 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~g~i~ 179 (609)
++|||+||++++++ +.+++++|+.|+..|.++|||||||++++.++++++++.++.+|.|+|++++++.+ +++.|++|
T Consensus 1 ~~ViK~GGs~l~~~-~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~~~~~~~~~~~~~g~r~t~~~~~~~~~~~~~g~~~ 79 (231)
T TIGR00761 1 TIVIKIGGAAISDL-LEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLRVTDKETLEVVEMVLIGQVN 79 (231)
T ss_pred CEEEEEChHHHhcc-HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHHHHcCCCCEecCCCccCCHHHHHHHHHHHhcchH
Confidence 58999999999886 89999999999999999999999999999999999999999999999999999987 55577999
Q ss_pred HHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC
Q 007275 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (609)
Q Consensus 180 ~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~ 259 (609)
..+++. |+++|++ ++++++.+++++++++. ++.|++++|+++.++.+.|+.+|++|+|||++|+
T Consensus 80 ~~i~~~---------L~~~G~~----a~~l~~~~~~~it~~~~---~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~~ 143 (231)
T TIGR00761 80 KELVAL---------LNKHGIN----AIGLTGGDGQLFTARSL---DKEDLGYVGEIKKVNKALLEALLKAGYIPVISSL 143 (231)
T ss_pred HHHHHH---------HHhCCCC----cccccCCCCCEEEEEEC---CCccCCcccceEEEcHHHHHHHHHCCCeEEECCC
Confidence 999886 5788988 89999999999999874 4568999999999999999999999999999999
Q ss_pred ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC-C-CccccccCHHHHHHHHH
Q 007275 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-S-GHLIRFLTLQEADSLIR 317 (609)
Q Consensus 260 ~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~-~-~~lI~~it~~e~~~l~~ 317 (609)
+.+.+|+++|+|+|.+|++||.+|+||+|+|+||+||++. + +++|++++.+|+++++.
T Consensus 144 ~~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~~~~i~~i~~~e~~~l~~ 203 (231)
T TIGR00761 144 ALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDGQSLISEIPLEEIEQLIE 203 (231)
T ss_pred ccCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCCCeeccccCHHHHHHHHH
Confidence 9888999999999999999999999999999999999853 3 45999999998888764
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model. |
| >cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=287.18 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=195.9
Q ss_pred eEEEEeCCcccCCCC---------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH
Q 007275 101 TFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
++|||+||++|++++ +++++++|+.++ |+++|||||||++++..++++|+++ |.|++++..|..+
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~~~~~~~~~g~~~----g~~~~~~~~l~~~ 74 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSFGHPKAKEYGLPD----GDGSFSAEGVAET 74 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcccCHHHHHhCCCc----CCCchhhhhHHHH
Confidence 489999999998753 455666666655 9999999999999999999999976 6789999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
...+.++|..+++. |.++|++ ++++++.+. +.+. +|++..++.+.|+.+|+.|
T Consensus 75 ~~~~~~ln~~~~~~---------l~~~g~~----a~~l~~~~~--~~~~------------~g~~~~~~~~~l~~ll~~g 127 (252)
T cd04241 75 HEAMLELNSIVVDA---------LLEAGVP----AVSVPPSSF--FVTE------------NGRIVSFDLEVIKELLDRG 127 (252)
T ss_pred HHHHHHHHHHHHHH---------HHHCCCC----eEEEChHHe--EEec------------CCeeeeecHHHHHHHHhCC
Confidence 77778999998886 4788887 777777652 2221 4788899999999999999
Q ss_pred CeEEEcCC-ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC----CCccccccCHHHHHHHHHhhchhhhhH
Q 007275 252 CLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIA 326 (609)
Q Consensus 252 ~IPVi~~~-~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~----~~~lI~~it~~e~~~l~~~~~~~~~~~ 326 (609)
+|||++++ +.+..++.+|+|+|.+|+.+|.+|+||+|+|+|||||++. ++++|++++.+++++++....
T Consensus 128 ~iPVi~~~~~~~~~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P~~~~~i~~i~~~~~~~~~~~~~------ 201 (252)
T cd04241 128 FVPVLHGDVVLDEGGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPPPDAKLIPEIDVGSLEDILAALG------ 201 (252)
T ss_pred CEEEEcCCeEecCCCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCeEcceeCccchHHHHHhcC------
Confidence 99999985 4567788999999999999999999999999999999853 599999999988887764210
Q ss_pred hhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHH
Q 007275 327 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAA 406 (609)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~a 406 (609)
.++...+| | |.+||++
T Consensus 202 ------------------------------------------~~~~~~tG-G---------------------m~~Kl~a 217 (252)
T cd04241 202 ------------------------------------------SAGTDVTG-G---------------------MAGKIEE 217 (252)
T ss_pred ------------------------------------------cCCccccC-C---------------------HHHHHHH
Confidence 00111234 4 9999999
Q ss_pred HHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 407 AAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 407 a~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
|..++++|++ +||+||+.++. +.++++++..||.|
T Consensus 218 a~~a~~~Gv~-v~I~~g~~~~~-l~~~l~g~~~GT~i 252 (252)
T cd04241 218 LLELARRGIE-VYIFNGDKPEN-LYRALLGNFIGTRI 252 (252)
T ss_pred HHHHHhcCCe-EEEEeCCCHHH-HHHHHcCCCCceEC
Confidence 9999999997 99999998875 67888888899975
|
Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=286.56 Aligned_cols=238 Identities=20% Similarity=0.261 Sum_probs=193.2
Q ss_pred CeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-
Q 007275 100 GTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA- 171 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~- 171 (609)
+++|||+|+|+|+++. +..++++|+.|++.|++||||++| +|..++..+|+++ |.++....+++
T Consensus 7 ~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSG--AiaaG~~~Lg~~~------rp~~l~~kQA~A 78 (369)
T COG0263 7 RRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSG--AIAAGRTRLGLPK------RPKTLAEKQAAA 78 (369)
T ss_pred eEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccc--hhhhChhhcCCCC------CCcchHHHHHHH
Confidence 6999999999998863 688999999999999999999999 8888889999987 45566666665
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
++.|+.++..+.+. |.+||++ +.++.++..| |...++ + ..-.++|..||+.|
T Consensus 79 AVGQ~~Lm~~y~~~---------f~~~g~~--v~QiLLTr~D--~~~r~r--y-------------~Nar~Tl~~Ll~~g 130 (369)
T COG0263 79 AVGQVRLMQLYEEL---------FARYGIK--VGQILLTRDD--FSDRRR--Y-------------LNARNTLSALLELG 130 (369)
T ss_pred HhCHHHHHHHHHHH---------HHhcCCe--eeEEEeehhh--hhhHHH--H-------------HHHHHHHHHHHHCC
Confidence 67788887777775 6889987 3333343333 332221 1 12356899999999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEeccccc-------CCCCccccccCH--HHHHHHHHhhchh
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-------DESGHLIRFLTL--QEADSLIRQRVKQ 322 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv-------~~~~~lI~~it~--~e~~~l~~~~~~~ 322 (609)
.|||||+|+..++.|+.++|||.+|+.+|..++||.|++|||+||+ +||+++|++++. .|++.+..
T Consensus 131 vVPIINENDtva~~EikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~~ag----- 205 (369)
T COG0263 131 VVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEAMAG----- 205 (369)
T ss_pred ceeeecCCCceeeeeeeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHHHhc-----
Confidence 9999999999999999999999999999999999999999999998 367899988863 24444421
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHH
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~ 402 (609)
+.++.+||| | |.+
T Consensus 206 ---------------------------------------------gsgs~~GTG-G---------------------M~T 218 (369)
T COG0263 206 ---------------------------------------------GSGSELGTG-G---------------------MRT 218 (369)
T ss_pred ---------------------------------------------CCCCCCCcc-c---------------------HHH
Confidence 246778888 7 999
Q ss_pred HHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccccc
Q 007275 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (609)
Q Consensus 403 kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~ 447 (609)
||.||..|+++|++ +.|.+|..++ .+.++..+...||.|.+..
T Consensus 219 Kl~AA~iA~~aG~~-~iI~~g~~~~-~i~~~~~~~~~GT~F~~~~ 261 (369)
T COG0263 219 KLEAAKIATRAGVP-VIIASGSKPD-VILDALEGEAVGTLFEPQA 261 (369)
T ss_pred HHHHHHHHHHcCCc-EEEecCCCcc-hHHHHHhCCCCccEEecCC
Confidence 99999999999998 9999999998 4667778889999998643
|
|
| >PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=283.01 Aligned_cols=257 Identities=21% Similarity=0.234 Sum_probs=202.1
Q ss_pred CeEEEEeCCcccCCCC-----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHH
Q 007275 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (609)
+++||+||||+|..+. ++..+++|+.|.+.|+++|||||+|||++.++......... -++..+|
T Consensus 3 ~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~~-----~~~~~pl 77 (313)
T PRK12454 3 KRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKDV-----GIPPFPL 77 (313)
T ss_pred ceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhccc-----CCCCCcc
Confidence 6899999999996521 46789999999999999999999999999887765443211 1356678
Q ss_pred HHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcce----eEEEeecCCceee-eeecCcc-c---------------
Q 007275 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV-D--------------- 226 (609)
Q Consensus 169 ~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~----av~l~~~d~~~l~-ak~~~~~-~--------------- 226 (609)
+.+ ++++|.|.++|+++|.+ .|.++|++.++. .+.++..|..|.+ .|+.|.. .
T Consensus 78 d~~~a~sqG~igy~l~~al~~-----~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~ 152 (313)
T PRK12454 78 DVAGAMTQGWIGYMIQQALRN-----ELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIV 152 (313)
T ss_pred chhhhhhhHHHHHHHHHHHHH-----HHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEE
Confidence 888 89999999999999866 789889876544 4568888888888 5555632 1
Q ss_pred --CcCCcceeeE------eeeCHHHHHHHHhCCCeEEEcCCc----cCCCCcEEE----ecHHHHHHHHHHHcCCCEEEE
Q 007275 227 --GVDYGATGEV------KKVDVTRMRERLDGGCLVILSNLG----YSSSGEVLN----CNTYEVATACALAIEADKLIC 290 (609)
Q Consensus 227 --~~d~g~~G~v------~~v~~~~I~~LL~~G~IPVi~~~~----~~~~ge~~~----id~D~lAa~lA~~L~Ad~LIi 290 (609)
....||...| +.++.+.|+.||+.|.|||+++.+ ++.+|++++ +|+|.+|+++|.+|+||+|||
T Consensus 153 ~~d~g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LIi 232 (313)
T PRK12454 153 KEDAGRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFII 232 (313)
T ss_pred EEcCCCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEEE
Confidence 1134666655 469999999999999999999664 455666665 588999999999999999999
Q ss_pred EecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccc
Q 007275 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (609)
Q Consensus 291 LTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
||||||++ +++++|++++.+|++.++.++.
T Consensus 233 LTdVdGVy~~~~~p~~~~i~~It~~e~~~~i~~g~--------------------------------------------- 267 (313)
T PRK12454 233 LTDVEKVYLNYGKPDQKPLDKVTVEEAKKYYEEGH--------------------------------------------- 267 (313)
T ss_pred EeCCceeeCCCCCCCCeEccccCHHHHHHHHhcCC---------------------------------------------
Confidence 99999984 5689999999999988875321
Q ss_pred cccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|.+| | |.+||++|..+++.|+.++||.+. +. +.+++.++ .||.|.+
T Consensus 268 -------~~~G-g---------------------M~pKv~AA~~~v~~gg~~a~I~~~---~~-i~~aL~G~-~GT~I~~ 313 (313)
T PRK12454 268 -------FKAG-S---------------------MGPKILAAIRFVENGGKRAIIASL---EK-AVEALEGK-TGTRIIP 313 (313)
T ss_pred -------cCCC-C---------------------hHHHHHHHHHHHHcCCCeEEECch---HH-HHHHHCCC-CCeEeCC
Confidence 2234 4 999999999999999889999863 32 55666554 8999853
|
|
| >PRK12686 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=283.74 Aligned_cols=256 Identities=19% Similarity=0.218 Sum_probs=196.2
Q ss_pred CCeEEEEeCCcccCCCC---------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHH-HcCCcccccCCccCCCHHHH
Q 007275 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~-~~g~~~~~~~g~rvt~~~~l 168 (609)
.+++|||+|||+|.++. .+..+++|+.|.+.|+++||||||||||+.++. ..+..+.+ .+..+|
T Consensus 2 ~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~~~------~~~~pl 75 (312)
T PRK12686 2 KEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNSNK------VPAMPL 75 (312)
T ss_pred CCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhccccC------CCCCCh
Confidence 47999999999997744 367899999999999999999999999996554 44444322 466789
Q ss_pred HHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcce----eEEEeecCCceee-eeecCcc------------c----
Q 007275 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV------------D---- 226 (609)
Q Consensus 169 ~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~----av~l~~~d~~~l~-ak~~~~~------------~---- 226 (609)
+++ ++++|.+.++|+++|.+ +|.+++...++. .+.++..|..|.+ .|+.|+. .
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~-----~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~ 150 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNN-----ELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTF 150 (312)
T ss_pred hhhhhhccchhhHHHHHHHHH-----HHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcc
Confidence 998 89999999999999866 788777665443 4457777888887 4444531 1
Q ss_pred CcC--CcceeeEee------eCHHHHHHHHhCCCeEEEcCCc----cCCCCcE----EEecHHHHHHHHHHHcCCCEEEE
Q 007275 227 GVD--YGATGEVKK------VDVTRMRERLDGGCLVILSNLG----YSSSGEV----LNCNTYEVATACALAIEADKLIC 290 (609)
Q Consensus 227 ~~d--~g~~G~v~~------v~~~~I~~LL~~G~IPVi~~~~----~~~~ge~----~~id~D~lAa~lA~~L~Ad~LIi 290 (609)
..| .||+++|.+ ++.++|+.||++|+|||+++.+ ..+++.+ .++|+|.+|++||.+|+||+|||
T Consensus 151 ~~d~~~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIi 230 (312)
T PRK12686 151 KEDAGRGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLII 230 (312)
T ss_pred cccCCCCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEE
Confidence 123 489999987 9999999999999999876321 1123333 36899999999999999999999
Q ss_pred EecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccc
Q 007275 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (609)
Q Consensus 291 LTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
||||||++ +++++|++++.+|++.++.++.
T Consensus 231 LTDVdGVy~~~~~p~ak~I~~I~~~e~~~li~~g~--------------------------------------------- 265 (312)
T PRK12686 231 LTGVENVFINFNKPNQQKLDDITVAEAKQYIAEGQ--------------------------------------------- 265 (312)
T ss_pred EeCchhhccCCCCCCCeECCccCHHHHHHHhhCCC---------------------------------------------
Confidence 99999985 4589999999999888875421
Q ss_pred cccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCC-CeEEEeecccccchhhhhhhcCCCccccc
Q 007275 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGV-QRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv-~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|.+| | |.+|++||..+++.|+ .+++|.+ ++. +.+++.++ .||.|.
T Consensus 266 -------~~tG-G---------------------M~pKveAA~~av~~g~g~~viI~~---~~~-i~~aL~G~-~GT~I~ 311 (312)
T PRK12686 266 -------FAPG-S---------------------MLPKVEAAIDFVESGEGKKAIITS---LEQ-AKEALAGN-AGTHIT 311 (312)
T ss_pred -------ccCC-C---------------------cHHHHHHHHHHHHhCCCCEEEEeC---chH-HHHHhCCC-CCeEEe
Confidence 2334 4 9999999999998764 4577776 332 44555554 899984
|
|
| >PRK12353 putative amino acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=281.92 Aligned_cols=261 Identities=18% Similarity=0.218 Sum_probs=193.5
Q ss_pred CCeEEEEeCCcccCCCC---------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
.++|||||||++|++++ +..++++|+.|++.|+++|||||||+|++..+...+..+++.+ ++++.....
T Consensus 2 ~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~~~~~--~~~~~~~~~ 79 (314)
T PRK12353 2 MKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAASEKN--KVPAMPLDV 79 (314)
T ss_pred CcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccccccCC--CCCCchhHH
Confidence 58999999999999865 6789999999999999999999999999988776665543322 455554444
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCc----ceeEEEeecCCce-eeeeecCcc------------cCcCCcc
Q 007275 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNF-LAAKRKGVV------------DGVDYGA 232 (609)
Q Consensus 170 ~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~----~~av~l~~~d~~~-l~ak~~~~~------------~~~d~g~ 232 (609)
.++..++.++..+++.|++ .|.++|+..+ +..+.++..|..| ..+++.|++ +|.||.+
T Consensus 80 ~~a~~qg~l~~~l~~~~~~-----~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~ 154 (314)
T PRK12353 80 CGAMSQGYIGYHLQNALRN-----ELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKE 154 (314)
T ss_pred HHHHHhHHHHHHHHHHHHH-----HHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeee
Confidence 4578889888877777754 5777877432 2234456666557 567777766 4455544
Q ss_pred -eee-Ee----------eeCHHHHHHHHhCCCeEEEcCCccCC----CCcE----EEecHHHHHHHHHHHcCCCEEEEEe
Q 007275 233 -TGE-VK----------KVDVTRMRERLDGGCLVILSNLGYSS----SGEV----LNCNTYEVATACALAIEADKLICII 292 (609)
Q Consensus 233 -~G~-v~----------~v~~~~I~~LL~~G~IPVi~~~~~~~----~ge~----~~id~D~lAa~lA~~L~Ad~LIiLT 292 (609)
+++ .+ .++.++|+.||+.|+|||+++.+..+ ++.+ .|+|+|++|+++|.+|+||+|||+|
T Consensus 155 ~~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lT 234 (314)
T PRK12353 155 DAGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILT 234 (314)
T ss_pred cCCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEe
Confidence 332 33 37999999999999999999764322 2222 3699999999999999999999999
Q ss_pred cccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccc
Q 007275 293 DGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATF 367 (609)
Q Consensus 293 Dvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (609)
||||++ +++++|++++.++++.++..+
T Consensus 235 dvdGVy~~~~~~~a~~i~~i~~~e~~~~~~~~------------------------------------------------ 266 (314)
T PRK12353 235 AVDKVYINFGKPNQKKLDEVTVSEAEKYIEEG------------------------------------------------ 266 (314)
T ss_pred CCccccCCCCCCCCeECcCcCHHHHHHHHhcC------------------------------------------------
Confidence 999985 358999999988888776431
Q ss_pred cCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHH-HcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 368 NNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC-RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 368 ~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~-~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.+++| | |.+||++|..++ +.+..+++|++ ++. +.+++.++ .||.|.+
T Consensus 267 ----~~~tG-G---------------------M~~Kl~aA~~a~~~~~g~~v~I~~---~~~-i~~~l~g~-~GT~i~~ 314 (314)
T PRK12353 267 ----QFAPG-S---------------------MLPKVEAAISFVESRPGRKAIITS---LEK-AKEALEGK-AGTVIVK 314 (314)
T ss_pred ----CcCCC-C---------------------cHHHHHHHHHHHHHcCCCEEEECC---chH-HHHHhCCC-CCeEecC
Confidence 12244 5 999999999999 44444599997 343 44666655 8999853
|
|
| >TIGR00746 arcC carbamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=278.33 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=190.8
Q ss_pred CeEEEEeCCcccCCC--C---------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHH
Q 007275 100 GTFVVIISGEIVSSP--Y---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 100 k~iVIKlGGsvl~~~--~---------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (609)
|+||||+|||+|..+ . ++.++++|+.|.+.|++||||||||||++.....+...+ ..++..+|
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~------~~~~~~p~ 74 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD------SEVPAMPL 74 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc------ccCCCCcc
Confidence 689999999999742 1 467999999999999999999999999997654432221 12344567
Q ss_pred HHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcc----eeEEEeecCCceeeeeec-Cc-c----------------
Q 007275 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRW----HEVGVSVASGNFLAAKRK-GV-V---------------- 225 (609)
Q Consensus 169 ~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~----~av~l~~~d~~~l~ak~~-~~-~---------------- 225 (609)
+++ ++.||.|++.++++|++ .|.++|+..++ .++.++..|..|.+..+. |. +
T Consensus 75 ~~~~A~~qg~lg~~~~~~l~~-----~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~ 149 (310)
T TIGR00746 75 DVLGAMSQGMIGYMLQQALNN-----ELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIV 149 (310)
T ss_pred hHHHHhhHHHHHHHHHHHHHH-----HHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeE
Confidence 887 89999999999998754 56688866433 355677777778774443 31 1
Q ss_pred -cCcCCcceeeE------eeeCHHHHHHHHhCCCeEEEcCCccC----CC----CcEEEecHHHHHHHHHHHcCCCEEEE
Q 007275 226 -DGVDYGATGEV------KKVDVTRMRERLDGGCLVILSNLGYS----SS----GEVLNCNTYEVATACALAIEADKLIC 290 (609)
Q Consensus 226 -~~~d~g~~G~v------~~v~~~~I~~LL~~G~IPVi~~~~~~----~~----ge~~~id~D~lAa~lA~~L~Ad~LIi 290 (609)
+...+||...| +.++.++|+.||+.|.|+|.++.+.. .+ |...|+|+|.+|+++|.+|+||+|||
T Consensus 150 ~~d~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~AD~LIi 229 (310)
T TIGR00746 150 KEDAGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNADILVI 229 (310)
T ss_pred eecCCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCCCEEEE
Confidence 11234565544 36899999999999985444433221 12 33358999999999999999999999
Q ss_pred EecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccc
Q 007275 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (609)
Q Consensus 291 LTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
||||||++ +++++|++++.+|++.++..+
T Consensus 230 LTDVdGVy~~~~~p~a~~i~~it~~e~~~~~~~g---------------------------------------------- 263 (310)
T TIGR00746 230 LTDVDAVYINYGKPDEKALREVTVEELEDYYKAG---------------------------------------------- 263 (310)
T ss_pred EeCCCceeCCCCCCCCcCCcCcCHHHHHHHHhcC----------------------------------------------
Confidence 99999984 568999999998888876321
Q ss_pred cccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.|++| | |.+||+||..+++.|+.++||++ ++ .+.+++.++ .||.|.
T Consensus 264 ------~~~tG-g---------------------M~~Kl~AA~~~~~~g~~~v~I~~---~~-~i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 264 ------HFAAG-S---------------------MGPKVEAAIEFVESGGKRAIITS---LE-NAVEALEGK-AGTRVT 309 (310)
T ss_pred ------CcCCC-C---------------------cHHHHHHHHHHHHhCCCeEEEec---hH-HHHHHHCCC-CCcEEe
Confidence 13344 4 99999999999999888899997 33 366777777 899985
|
The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff. |
| >cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=269.10 Aligned_cols=237 Identities=30% Similarity=0.399 Sum_probs=205.8
Q ss_pred EEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHHHHHH
Q 007275 103 VVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM 181 (609)
Q Consensus 103 VIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i~~~ 181 (609)
||||||++++++. +++++++|+.+++.|+++|||||||++++..+.+++....+..+.++++.+.+..++...+..+..
T Consensus 1 ViKiGGs~l~~~~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T cd02115 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMGEGMSNLL 80 (248)
T ss_pred CEeeCccccCCHHHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHHhhhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 7999999998744 899999999999899999999999999999999999887777788888888777777777888888
Q ss_pred HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCCcc
Q 007275 182 IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261 (609)
Q Consensus 182 l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~ 261 (609)
+++. |.++|++ +..+++.+..+... +++++|.+..++.+.|+++|+.|.|||+++++.
T Consensus 81 ~~~~---------l~~~gi~----a~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~ 138 (248)
T cd02115 81 IAAA---------LEQHGIK----AVPLDLTQAGFASP---------NQGHVGKITKVSTDRLKSLLENGILPILSGFGG 138 (248)
T ss_pred HHHH---------HHhCCCC----eEEEchHHcCeEeC---------CCCCcccceeeCHHHHHHHHhCCcEEEecCeEe
Confidence 8876 5788987 77887776555432 568899999999999999999999999999876
Q ss_pred CC---CCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHhhhhh
Q 007275 262 SS---SGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 331 (609)
Q Consensus 262 ~~---~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~ 331 (609)
.+ .+++.++++|.+|+.+|.+|+||+|+|+|||+|++ +++++|++++.+|++++...
T Consensus 139 ~~~~~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~------------- 205 (248)
T cd02115 139 TDEKETGTLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYA------------- 205 (248)
T ss_pred ccCCceeeecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHHc-------------
Confidence 65 77889999999999999999999999999999984 24899999999988887532
Q ss_pred hhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHH
Q 007275 332 AVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 411 (609)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~ 411 (609)
| + |..|++++..+.
T Consensus 206 --------------------------------------------g-~---------------------~~~k~~a~~~~~ 219 (248)
T cd02115 206 --------------------------------------------G-A---------------------MVLKPKAADPAA 219 (248)
T ss_pred --------------------------------------------C-C---------------------CccCHHHHHHHH
Confidence 2 3 788899999999
Q ss_pred HcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 412 ~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
+.|+ +++|+++..++.| ++|++++.||+|
T Consensus 220 ~~~~-~v~I~~~~~~~~l--~~~~~~~~GT~I 248 (248)
T cd02115 220 RAGI-PVRIANTENPGAL--ALFTPDGGGTLI 248 (248)
T ss_pred HcCC-cEEEEeCCCcccc--cccCCCCCCCCC
Confidence 9996 5999999999875 999999999986
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. |
| >COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=257.08 Aligned_cols=258 Identities=19% Similarity=0.204 Sum_probs=204.2
Q ss_pred CeEEEEeCCcccCCCC-----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHH
Q 007275 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (609)
++|||.||||+|..+. +...+++|+.|.+.|+++||+||+|||++.++......... .-.+...|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~~----~~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADSE----KGVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhccc----cCCCCccH
Confidence 4799999999996531 56789999999999999999999999999988766553221 12456788
Q ss_pred HHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCc----ceeEEEeecCCceee-eeecCcc-----------------
Q 007275 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLA-AKRKGVV----------------- 225 (609)
Q Consensus 169 ~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~----~~av~l~~~d~~~l~-ak~~~~~----------------- 225 (609)
+.+ ++++|.|.++|+++|.+ .|.+++++.+ ++.+.++..|+.|.+ .|+.|++
T Consensus 77 d~~~AmsQG~IGy~l~qal~n-----~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~ 151 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRN-----ELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVF 151 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHH-----HHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEE
Confidence 887 89999999999999977 6788886543 345678889999999 5556643
Q ss_pred -cCcCCcceeeE------eeeCHHHHHHHHhCCCeEEEcCCccC-----C---CCcEEEecHHHHHHHHHHHcCCCEEEE
Q 007275 226 -DGVDYGATGEV------KKVDVTRMRERLDGGCLVILSNLGYS-----S---SGEVLNCNTYEVATACALAIEADKLIC 290 (609)
Q Consensus 226 -~~~d~g~~G~v------~~v~~~~I~~LL~~G~IPVi~~~~~~-----~---~ge~~~id~D~lAa~lA~~L~Ad~LIi 290 (609)
+..+.||..+| +.++.++|+.|+++|.+||.++-+-. . .|--.+||.|..|++||.+++||.|||
T Consensus 152 keD~~rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liI 231 (312)
T COG0549 152 KEDAGRGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLII 231 (312)
T ss_pred EecCCCCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEE
Confidence 12345566654 56899999999999999999864321 1 244569999999999999999999999
Q ss_pred EecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccc
Q 007275 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (609)
Q Consensus 291 LTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
|||||.++ |+.+.|+.++.+|+++++.++
T Consensus 232 LTdVd~Vy~n~gkp~q~~L~~v~~~e~~~yl~eg---------------------------------------------- 265 (312)
T COG0549 232 LTDVDAVYVNFGKPNQQALDRVTVDEMEKYLAEG---------------------------------------------- 265 (312)
T ss_pred EeccchheecCCCccchhhcccCHHHHHHHHhcC----------------------------------------------
Confidence 99999773 788999999999999998662
Q ss_pred cccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.|+.|| |.||++||+.+++++-+++.|.+- +. +.+.+ ....||.|.+
T Consensus 266 -------------------~Fa~GS---------M~PKVeAai~Fv~~~gk~A~ItsL--e~--~~~~l-~g~~GT~I~~ 312 (312)
T COG0549 266 -------------------QFAAGS---------MGPKVEAAISFVENTGKPAIITSL--EN--AEAAL-EGKAGTVIVP 312 (312)
T ss_pred -------------------CCCCCC---------ccHHHHHHHHHHHcCCCceEECcH--HH--HHHHh-ccCCCcEecC
Confidence 378888 999999999999999888888762 22 34444 4678998853
|
|
| >PRK09411 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=261.58 Aligned_cols=245 Identities=22% Similarity=0.204 Sum_probs=190.2
Q ss_pred CeEEEEeCCcccCCCC-----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHH
Q 007275 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (609)
+++||.||||+|..+. .+..++.|+.|.+. |++||+||+|||++.++.+...... .++.+|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~-------~~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKE-------VEPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcC-------CCCCCc
Confidence 5899999999996521 45678999999887 9999999999999988776544321 266788
Q ss_pred HHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCc----ceeEEEeecCCceee-eeecCcc------------cC---
Q 007275 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLA-AKRKGVV------------DG--- 227 (609)
Q Consensus 169 ~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~----~~av~l~~~d~~~l~-ak~~~~~------------~~--- 227 (609)
+++ ++++|.|.++|+++|. ..+...+ ++++.++..|..|.+ .|+.|.+ ++
T Consensus 74 d~~~a~sqG~iGy~l~q~l~---------~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~ 144 (297)
T PRK09411 74 DVLVAESQGMIGYMLAQSLS---------AQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQM 144 (297)
T ss_pred hhhhhhcccHHHHHHHHHHH---------HcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEE
Confidence 998 8999999999999874 3454433 345578888888888 5555532 11
Q ss_pred -cCCcceeeE-------eeeCHHHHHHHHhCCCeEEEc-----CCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecc
Q 007275 228 -VDYGATGEV-------KKVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (609)
Q Consensus 228 -~d~g~~G~v-------~~v~~~~I~~LL~~G~IPVi~-----~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDv 294 (609)
.|-.+.++| +.++.+.|+.||++|+|||++ |+..+.+|...|+|+|.+|+.||.+|+||+|||||||
T Consensus 145 ~~dg~g~rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDV 224 (297)
T PRK09411 145 KRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDA 224 (297)
T ss_pred EecCCceEEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeEEcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCc
Confidence 333456666 789999999999999999987 4444445778999999999999999999999999999
Q ss_pred cccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccC
Q 007275 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (609)
Q Consensus 295 dgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (609)
||++ +++++|++++.+|++.++..
T Consensus 225 dGV~~n~~~p~~~~I~~it~~e~~~~~~~--------------------------------------------------- 253 (297)
T PRK09411 225 DAVYENWGTPQQRAIRHATPDELAPFAKA--------------------------------------------------- 253 (297)
T ss_pred hhhccCCCCCCCcCCCCcCHHHHHHhccC---------------------------------------------------
Confidence 9884 46789999999888766421
Q ss_pred CcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 370 ~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+| | |.+|++||..+++.|.++++|.+ ... +.+++.++ .||.|.
T Consensus 254 -----~G-g---------------------M~pKVeAA~~~v~~~g~~a~I~~---l~~-~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 254 -----DG-A---------------------MGPKVTAVSGYVRSRGKPAWIGA---LSR-IEETLAGE-AGTCIS 296 (297)
T ss_pred -----CC-C---------------------cHHHHHHHHHHHHhCCCeEEECC---hhH-HHHHHCCC-CCeEEe
Confidence 23 4 99999999999998888888865 222 44555554 799884
|
|
| >cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=260.69 Aligned_cols=253 Identities=19% Similarity=0.209 Sum_probs=192.3
Q ss_pred eEEEEeCCcccCCCC-----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 101 TFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
++|||||||+|..+. ++.++++|+.|.+.|+++|||||||||++.++....... ..++...|+
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~------~~~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAA------EKVPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhcc------ccCCCCCcc
Confidence 589999999996411 578899999999999999999999999999887755432 124556788
Q ss_pred HH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcce----eEEEeecCCceee-eeecCcc-c----------------
Q 007275 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV-D---------------- 226 (609)
Q Consensus 170 ~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~----av~l~~~d~~~l~-ak~~~~~-~---------------- 226 (609)
.+ ++.+|.+.+.|+.+|.+ .|.++|++.++. .+.+...|..|.+ .|+.|.. +
T Consensus 75 ~~~a~~~G~ig~~~~~al~~-----~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~ 149 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDN-----ELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFK 149 (308)
T ss_pred hhcchhhHHHHHHHHHHHHH-----HHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEE
Confidence 87 88999999999988866 788888876443 3457777787877 4445532 1
Q ss_pred -CcCCcceeeE------eeeCHHHHHHHHhCCCeEEEcCC-----ccCCCCcEE----EecHHHHHHHHHHHcCCCEEEE
Q 007275 227 -GVDYGATGEV------KKVDVTRMRERLDGGCLVILSNL-----GYSSSGEVL----NCNTYEVATACALAIEADKLIC 290 (609)
Q Consensus 227 -~~d~g~~G~v------~~v~~~~I~~LL~~G~IPVi~~~-----~~~~~ge~~----~id~D~lAa~lA~~L~Ad~LIi 290 (609)
....||...| +.++.+.|+.||++|+|||+++. ..+ .+.++ ++|+|.+|+++|.+|+||+|++
T Consensus 150 ~d~~~g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~-~~~~~gveaVid~D~~AallA~~l~Ad~Lii 228 (308)
T cd04235 150 EDAGRGYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVRE-GGGLKGVEAVIDKDLASALLAEEINADLLVI 228 (308)
T ss_pred EeCCCCceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEc-CCceeeeeeccCccHHHHHHHHHcCCCEEEE
Confidence 0113455444 46899999999999999999944 232 24333 5799999999999999999999
Q ss_pred EecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccc
Q 007275 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (609)
Q Consensus 291 LTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
+|||||++ +++++|++++.+|+.+++..+
T Consensus 229 lTdVdGVy~~~~~pda~~i~~Is~~e~~~l~~~g---------------------------------------------- 262 (308)
T cd04235 229 LTDVDNVYINFGKPNQKALEQVTVEELEKYIEEG---------------------------------------------- 262 (308)
T ss_pred EecCCeEECCCCCCCCeEcCCcCHHHHHHHHhcC----------------------------------------------
Confidence 99999984 458999999999888876432
Q ss_pred cccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.|.+| | |.+|+++|..+++.|..+++|.+ .+. +.+++.++ .||.|.
T Consensus 263 ------~~~tG-G---------------------M~pKv~aA~~~a~~gg~~v~I~~---~~~-i~~aL~G~-~GT~I~ 308 (308)
T cd04235 263 ------QFAPG-S---------------------MGPKVEAAIRFVESGGKKAIITS---LEN-AEAALEGK-AGTVIV 308 (308)
T ss_pred ------ccccC-C---------------------cHHHHHHHHHHHHhCCCeEEECC---HHH-HHHHHCCC-CCeEEC
Confidence 12334 4 99999999999998877788877 333 45555555 799873
|
Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK). |
| >PRK13402 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=269.21 Aligned_cols=238 Identities=19% Similarity=0.262 Sum_probs=179.9
Q ss_pred CCeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
.+++|||+||++|++++ +..++++|+.|++.|++|||||||+++++. .+++.. ++.+++..+++.
T Consensus 5 ~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~--~~l~~~----~~~~~~~~qala-- 76 (368)
T PRK13402 5 WKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGY--HKLGFI----DRPSVPEKQAMA-- 76 (368)
T ss_pred CcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCc--cccCCC----CCCCccHHHHHH--
Confidence 37999999999998642 578999999999999999999999887776 455543 222455443333
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
.+.+..++..+... |+++|++ +.++...+.+|...++ | ..-.++|+.||+.|
T Consensus 77 avGq~~l~~~~~~~---------f~~~g~~----~aqvLlT~~d~~~~~~--------y-------~n~~~~l~~LL~~g 128 (368)
T PRK13402 77 AAGQGLLMATWSKL---------FLSHGFP----AAQLLLTHGDLRDRER--------Y-------INIRNTINVLLERG 128 (368)
T ss_pred HhhHHHHHHHHHHH---------HHHCCCe----EEEEEEecchhhhHHH--------H-------HHHHHHHHHHHHCC
Confidence 33444455666664 6889987 5666555554422111 1 01136899999999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCH--HHHHHHHHhhchh
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQ 322 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~--~e~~~l~~~~~~~ 322 (609)
+|||+++++...+.++.++|+|.+|+++|.+++||.|+|+|||||++ |++++|++|+. +++..+...
T Consensus 129 ~IPIinenD~v~~~el~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~l~~~---- 204 (368)
T PRK13402 129 ILPIINENDAVTTDRLKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYAMAGG---- 204 (368)
T ss_pred cEEEEeCCCcEeecccccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHHHhcc----
Confidence 99999998877777888999999999999999999999999999984 36899999985 444443211
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHH
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~ 402 (609)
.++.+++| | |.+
T Consensus 205 ----------------------------------------------~~s~~gtG-G---------------------M~~ 216 (368)
T PRK13402 205 ----------------------------------------------AGSNVGTG-G---------------------MRT 216 (368)
T ss_pred ----------------------------------------------cccCcCcC-C---------------------chH
Confidence 13446666 6 999
Q ss_pred HHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 403 kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
||+||..|.++|++ ++|+++..++ .|.+++.++..||+|.+.
T Consensus 217 Kl~Aa~~a~~~gi~-v~I~~g~~~~-~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 217 KIQAAKIAMSHGIE-TFIGNGFTAD-IFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHHHHHHHHHcCCc-EEEEcCCCch-HHHHHhcCCCCceEEecC
Confidence 99999999999998 8999999888 567788888899999764
|
|
| >PRK12354 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=259.43 Aligned_cols=250 Identities=20% Similarity=0.191 Sum_probs=185.3
Q ss_pred eEEEEeCCcccCCCC-----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 101 TFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
++|||||||+|.++. ++..++.|+.|.+ |+++||+||+|||++.++.+..... ..+..+|+
T Consensus 2 ~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~-------~~~~~pl~ 73 (307)
T PRK12354 2 RIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYK-------DVTPYPLD 73 (307)
T ss_pred eEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhc-------CCCCCCcc
Confidence 799999999998732 3467888998887 9999999999999997655433221 12556778
Q ss_pred HH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceee-eeecCcc----------------cCcCCc
Q 007275 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLA-AKRKGVV----------------DGVDYG 231 (609)
Q Consensus 170 ~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~-ak~~~~~----------------~~~d~g 231 (609)
.+ ++.+|.+.+++++.|.+ .|.+..+.+-+.++.++..|..|-. .|+.|.+ -..|-.
T Consensus 74 ~~~a~sqg~iGy~l~q~l~~-----~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~ 148 (307)
T PRK12354 74 VLGAETEGMIGYMLEQELGN-----LLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGD 148 (307)
T ss_pred hhcccccchHHHHHHHHHHH-----HhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCC
Confidence 77 78999999999998765 4544445555566778888888877 4444421 112222
Q ss_pred ceeeEe-------eeCHHHHHHHHhCCCeEEEc-----CCccCCCCcEE----EecHHHHHHHHHHHcCCCEEEEEeccc
Q 007275 232 ATGEVK-------KVDVTRMRERLDGGCLVILS-----NLGYSSSGEVL----NCNTYEVATACALAIEADKLICIIDGP 295 (609)
Q Consensus 232 ~~G~v~-------~v~~~~I~~LL~~G~IPVi~-----~~~~~~~ge~~----~id~D~lAa~lA~~L~Ad~LIiLTDvd 295 (609)
+.++|. .++.+.|+.||++|+|||++ |+..+.+++.+ ++|+|.+|++||.+|+||+|+||||||
T Consensus 149 g~rrVv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVd 228 (307)
T PRK12354 149 YFRRVVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVYDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVD 228 (307)
T ss_pred ceEEEecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCc
Confidence 334443 69999999999999998886 54444434443 479999999999999999999999999
Q ss_pred ccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCC
Q 007275 296 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (609)
Q Consensus 296 gv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (609)
|++ |++++|++++.+|++++ .
T Consensus 229 GVy~~~~~p~~k~i~~it~~e~~~~--~---------------------------------------------------- 254 (307)
T PRK12354 229 AVYLDWGKPTQRAIAQATPDELREL--G---------------------------------------------------- 254 (307)
T ss_pred ceecCCCCCCCeECCCCCHHHHHhh--C----------------------------------------------------
Confidence 984 45789999998887665 1
Q ss_pred cccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 371 ~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+| | |.+|++||..+++.|.++++|.+ .. -+.+++.++ .||.|.++
T Consensus 255 --f~~G-g---------------------M~pKV~AA~~~~~~gg~~viI~~---~~-~l~~al~G~-~GT~I~~~ 301 (307)
T PRK12354 255 --FAAG-S---------------------MGPKVEAACEFVRATGKIAGIGS---LE-DIQAILAGE-AGTRISPE 301 (307)
T ss_pred --CCcC-C---------------------hHHHHHHHHHHHHhCCCEEEECC---HH-HHHHHHCCC-CceEEecC
Confidence 2234 4 99999999999988887788854 22 356777654 89999764
|
|
| >PRK05429 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=265.26 Aligned_cols=237 Identities=20% Similarity=0.263 Sum_probs=181.5
Q ss_pred CCeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
.+++|||+||++|+++. +.+++++|+.+++.|+++|||||| +++..+..+++..++ ......+++
T Consensus 8 ~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sG--ai~~g~~~l~l~~~~------~~~~~~qa~ 79 (372)
T PRK05429 8 ARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSG--AVAAGRERLGLPERP------KTLAEKQAA 79 (372)
T ss_pred CCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEccc--HhhhhHhhcCCCCCC------CchHHHHHH
Confidence 36899999999998632 678999999999999999999998 466677788876432 122233333
Q ss_pred -HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeC-HHHHHHHHh
Q 007275 172 -MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLD 249 (609)
Q Consensus 172 -~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~-~~~I~~LL~ 249 (609)
...+..++..+... |+++|++ +.++...+.+|....+ .++ .++|+.||+
T Consensus 80 aavGq~~L~~~~~~~---------l~~~gi~----~~qil~t~~d~~~~~~----------------~ln~~~~i~~Ll~ 130 (372)
T PRK05429 80 AAVGQSRLMQAYEEL---------FARYGIT----VAQILLTRDDLEDRER----------------YLNARNTLRTLLE 130 (372)
T ss_pred HHHhHHHHHHHHHHH---------HHHCCCC----EEEEEeehhHhhhhhH----------------hhhHHHHHHHHHH
Confidence 34455555556554 6899987 6666555555532111 122 478999999
Q ss_pred CCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCH--HHHHHHHHhhc
Q 007275 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRV 320 (609)
Q Consensus 250 ~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~--~e~~~l~~~~~ 320 (609)
.|+|||+++++.....++.++|+|.+|++||.+|+||+|+|+|||||++ |++++|++++. +|++.++..
T Consensus 131 ~g~IPVi~~nd~v~~~~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~~~-- 208 (372)
T PRK05429 131 LGVVPIINENDTVATDEIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMAGG-- 208 (372)
T ss_pred CCCEEEEcCCCccceecccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHhcC--
Confidence 9999999998877666778899999999999999999999999999984 35899999986 456665422
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
.++.+++| | |
T Consensus 209 ------------------------------------------------~~~~~gtG-G---------------------M 218 (372)
T PRK05429 209 ------------------------------------------------AGSGLGTG-G---------------------M 218 (372)
T ss_pred ------------------------------------------------CCCCcCcC-C---------------------c
Confidence 12234555 5 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
.+||+||..|.+.|++ ++|+||+.++ .+.++++++..||.|.+.
T Consensus 219 ~~Kl~aa~~a~~~Gi~-v~I~~g~~~~-~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 219 ATKLEAARIATRAGIP-VVIASGREPD-VLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHHHHHHHHCCCe-EEEEcCCCcc-HHHHHhcCCCCCEEEeeC
Confidence 9999999999999997 9999999988 577888888899999864
|
|
| >cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=256.36 Aligned_cols=244 Identities=18% Similarity=0.187 Sum_probs=171.6
Q ss_pred CCeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEE-EEECChHHHhHHHHHcCC-ccc----ccCCcc---
Q 007275 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGH-EAK----YLGRYR--- 161 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vV-LVhGgG~~i~~~l~~~g~-~~~----~~~g~r--- 161 (609)
-++||||+|||+|++++ +..++++|+.|++.|++|| ++||++.+.+..+...+. ... ..++.+
T Consensus 8 ~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~~~~ 87 (284)
T cd04256 8 AKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDM 87 (284)
T ss_pred CCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccccCC
Confidence 37999999999998753 5789999999999999999 555555555555544322 000 001111
Q ss_pred CCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeC
Q 007275 162 ITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 240 (609)
Q Consensus 162 vt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~ 240 (609)
..+....+++ .+.+..+...+.+. |.+++++ +.++.....+|-..+. ....
T Consensus 88 ~~~~~~~qa~aa~gq~~L~~~y~~~---------f~~~~~~----~~q~llt~~d~~~~~~---------------~~~~ 139 (284)
T cd04256 88 PQMELDGRACAAVGQSGLMALYEAM---------FTQYGIT----VAQVLVTKPDFYDEQT---------------RRNL 139 (284)
T ss_pred cchhHHHHHHHHcccHHHHHHHHHH---------HHHcCCc----HHHeeeeccccccHHH---------------HHHH
Confidence 2222233443 45566666666654 6788886 3344344444433221 2245
Q ss_pred HHHHHHHHhCCCeEEEcCCccCCC-------CcE--EEecHHHHHHHHHHHcCCCEEEEEecccccC------CCCcccc
Q 007275 241 VTRMRERLDGGCLVILSNLGYSSS-------GEV--LNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIR 305 (609)
Q Consensus 241 ~~~I~~LL~~G~IPVi~~~~~~~~-------ge~--~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~------~~~~lI~ 305 (609)
.++|+.||+.|+|||+++++...+ ++. .++|+|.+|+++|.+++||+|||+|||||++ |++++|+
T Consensus 140 ~~~l~~lL~~g~iPVi~~nD~v~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~ 219 (284)
T cd04256 140 NGTLEELLRLNIIPIINTNDAVSPPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIH 219 (284)
T ss_pred HHHHHHHHHCCCEEEEeCCCcccccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcc
Confidence 679999999999999998765432 222 4599999999999999999999999999984 3589999
Q ss_pred ccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccc
Q 007275 306 FLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQG 385 (609)
Q Consensus 306 ~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~ 385 (609)
+++..+.+.+... ..+.+++| |
T Consensus 220 ~i~~~~~~~~~~~--------------------------------------------------~~s~~gtG-G------- 241 (284)
T cd04256 220 TFYPGDQQSITFG--------------------------------------------------TKSRVGTG-G------- 241 (284)
T ss_pred cccHhHHHHhhcc--------------------------------------------------cccCcccC-C-------
Confidence 9997665443211 12234456 5
Q ss_pred ccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 386 FAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 386 ~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|.+||+||..|.+.|++ ++|++|..++. +.+++.++..||.|.
T Consensus 242 --------------M~~Kl~Aa~~a~~~Gi~-v~I~~G~~~~~-i~~~l~G~~~GT~~~ 284 (284)
T cd04256 242 --------------MEAKVKAALWALQGGTS-VVITNGMAGDV-ITKILEGKKVGTFFT 284 (284)
T ss_pred --------------cHHHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHcCCCCCEEeC
Confidence 99999999999999997 99999999985 677788888999883
|
G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. |
| >PTZ00489 glutamate 5-kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=250.15 Aligned_cols=234 Identities=15% Similarity=0.154 Sum_probs=169.5
Q ss_pred CCeEEEEeCCcccCCCC------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-
Q 007275 99 GGTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA- 171 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~- 171 (609)
-+++|||+|||+|++++ +..++++|+.|++ +++|||||||+ +......+++... .....+++
T Consensus 8 ~~riVIKlG~Svit~~~~~~~~~~~~l~~~i~~l~~-~~~vilVssGa--va~g~~~~~~~~~--------~~~~~qa~a 76 (264)
T PTZ00489 8 VKRIVVKVGSSILVDNQEIAAHRIEALCRFIADLQT-KYEVILVTSGA--VAAGYTKKEMDKS--------YVPNKQALA 76 (264)
T ss_pred CCEEEEEeccceeeCCCCcCHHHHHHHHHHHHHHhc-CCeEEEEecCh--HhcChhhcCCCcc--------ccHHHHHHH
Confidence 47899999999998654 5788999999986 79999999886 4433445555431 11223333
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
.+.|..++..+... |.++|+. +.++.....+|-..++ .....++|++||+.|
T Consensus 77 aiGq~~L~~~y~~~---------f~~~~~~----~aqiLlt~~d~~~~~~---------------~~n~~~~l~~lL~~g 128 (264)
T PTZ00489 77 SMGQPLLMHMYYTE---------LQKHGIL----CAQMLLAAYDLDSRKR---------------TINAHNTIEVLISHK 128 (264)
T ss_pred HhCHHHHHHHHHHH---------HHhCCCe----EEEeeeeccccccchh---------------hHHHHHHHHHHHHCC
Confidence 45566687777775 5889987 4444433322222111 123467899999999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCcc---ccccCHHHHHHHHHhhch
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHL---IRFLTLQEADSLIRQRVK 321 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~l---I~~it~~e~~~l~~~~~~ 321 (609)
+|||+++++..+..|+.|+|+|.+|+.+|.+++||+|||+|||||++ |++++ |++++.+++.... .
T Consensus 129 ~VPIinend~~~~~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~~~--~-- 204 (264)
T PTZ00489 129 VIPIINENDATALHELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVAEA--T-- 204 (264)
T ss_pred CEEEECCCCCcccceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHHhc--C--
Confidence 99999999988888999999999999999999999999999999984 23555 6677765542211 0
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
..+.+++| | |.
T Consensus 205 -----------------------------------------------~~~~~~tG-G---------------------M~ 215 (264)
T PTZ00489 205 -----------------------------------------------PNNRFATG-G---------------------IV 215 (264)
T ss_pred -----------------------------------------------cCCCcccC-C---------------------hH
Confidence 01233455 5 99
Q ss_pred HHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcC--CCccccccc
Q 007275 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD--GMGTMVASD 446 (609)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~--g~GT~i~~d 446 (609)
+||+||..|.+.|++ ++|++|..++. +..++.++ ..||.|.+.
T Consensus 216 ~Kl~aa~~a~~~Gi~-v~I~~g~~~~~-i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 216 TKLQAAQFLLERGGK-MYLSSGFHLEK-ARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHHHHHHCCCC-EEEEeCCCchH-HHHHHcCCCCCCceEEeec
Confidence 999999999999997 99999999985 55666543 379999763
|
|
| >PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=249.24 Aligned_cols=192 Identities=33% Similarity=0.443 Sum_probs=165.2
Q ss_pred CeEEEEeCCcccCCC--ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-HHHHH
Q 007275 100 GTFVVIISGEIVSSP--YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAG 176 (609)
Q Consensus 100 k~iVIKlGGsvl~~~--~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~g 176 (609)
|++||||||++++++ .+.+++++|+.+.+.|+++|||||+|++++.+++.+++.+++.++.|+|+....... +.+.+
T Consensus 1 k~~ViK~GGs~l~~~~~~~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 80 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKDEELRELADDIALLSQLGIKVVVVHGGGSFTDELLEKYGIEPKFVDGSRVTDIETGLIITMAAAA 80 (242)
T ss_dssp SEEEEEE-HHGHSSHSHHHHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHCTHTTSEETHHCHBHHHHHHHHHHHHHH
T ss_pred CeEEEEECchhhCCchHHHHHHHHHHHHHHhCCCeEEEEECChhhcCchHHhccCCcccchhhhhhhhhhhHHHHHHHhh
Confidence 689999999999986 589999999999999999999999999999999999999999888899998888776 66677
Q ss_pred HHHH-----HHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 177 GIRM-----MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 177 ~i~~-----~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
.+|. .+... +..++.. .+++...+.++....+.. ..++.+.|+.+|++|
T Consensus 81 ~l~~~~~~~~i~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~l~~~ 134 (242)
T PF00696_consen 81 ELNRDALLDEIVSA---------GERLGAH----AVGLSLSDGGISAAKRDA-------------REVDKEAIRELLEQG 134 (242)
T ss_dssp HHHHHHHHHHHHHH---------HHHCTHH----EEEHHHTGGTEEEEEEES-------------SEEHHHHHHHHHHTT
T ss_pred ccccchhHHHHHHh---------hhhhhHH----HHhhhhhcccchhhhhhh-------------hhhHHHHHHHHHHCC
Confidence 7777 66654 4666654 778878777666644310 157899999999999
Q ss_pred CeEEEcCCc-cCCCCcE---EEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 252 CLVILSNLG-YSSSGEV---LNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 252 ~IPVi~~~~-~~~~ge~---~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
.|||++|.. .+.+|++ .++++|.+|+.||.+|+|++|+|+|||||++ +++++|++|+.+|++++..
T Consensus 135 ~ipVv~g~~~~~~~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~ 211 (242)
T PF00696_consen 135 IIPVVSGFAGIDDDGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELAS 211 (242)
T ss_dssp SEEEEESEEEEETTSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHH
T ss_pred CEEEEeCCcccCCCCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHh
Confidence 999999986 7888988 9999999999999999999999999999984 4789999999999999874
|
In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A .... |
| >cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=249.18 Aligned_cols=234 Identities=19% Similarity=0.237 Sum_probs=172.0
Q ss_pred eEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-H
Q 007275 101 TFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-M 172 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~ 172 (609)
++|||+||+++++++ +.+++++|+.++..|+++||||||+... ....+++...+ ......+++ .
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~--g~~~~~~~~~~------~~~~~~~~~~~ 72 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAA--GRQRLGLEKRP------KTLPEKQALAA 72 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhh--ChhhhccCcCC------CchhHHHHHHH
Confidence 589999999998864 6788999999999999999999874332 23455543321 111223332 2
Q ss_pred HHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCC
Q 007275 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (609)
Q Consensus 173 ~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~ 252 (609)
..+..++..+.. .|+++|++ +.++...+.+|..++. .....+.|+.||+.|+
T Consensus 73 ~Gq~~l~~~~~~---------~l~~~Gi~----~~q~l~t~~~~~~~~~---------------~~~~~~~i~~ll~~g~ 124 (251)
T cd04242 73 VGQSLLMALYEQ---------LFAQYGIK----VAQILLTRDDFEDRKR---------------YLNARNTLETLLELGV 124 (251)
T ss_pred HhHHHHHHHHHH---------HHHHcCCe----EEEEEEehhHhcchHH---------------HHHHHHHHHHHHHCCC
Confidence 333333334444 47889987 5566566655543321 0112578999999999
Q ss_pred eEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccC--HHHHHHHHHhhchhh
Q 007275 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT--LQEADSLIRQRVKQS 323 (609)
Q Consensus 253 IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it--~~e~~~l~~~~~~~~ 323 (609)
|||+++++...++++.++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++ .+|+..+....
T Consensus 125 iPVv~~~d~v~~~~~~~~~~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~---- 200 (251)
T cd04242 125 IPIINENDTVATEEIRFGDNDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMAGGS---- 200 (251)
T ss_pred EEEEcCCCCeeeeccccCChHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHhccc----
Confidence 9999987766666677899999999999999999999999999984 3589999999 77777664110
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
.+.+++| | |.+|
T Consensus 201 ----------------------------------------------~~~~~tg-g---------------------m~~K 212 (251)
T cd04242 201 ----------------------------------------------GSSVGTG-G---------------------MRTK 212 (251)
T ss_pred ----------------------------------------------CcCcccC-C---------------------cHHH
Confidence 1223445 5 9999
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|++|..+.+.|++ ++|+||..++ .+.+++++++.||+|.
T Consensus 213 l~a~~~a~~~gi~-v~I~~g~~~~-~i~~~l~g~~~GT~i~ 251 (251)
T cd04242 213 LKAARIATEAGIP-VVIANGRKPD-VLLDILAGEAVGTLFL 251 (251)
T ss_pred HHHHHHHHHCCCc-EEEEcCCCCC-HHHHHHcCCCCCeEeC
Confidence 9999999999998 9999999998 4777888888999873
|
G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir |
| >PRK12314 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=247.85 Aligned_cols=236 Identities=19% Similarity=0.211 Sum_probs=169.2
Q ss_pred CCeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEE-ECChHHHhHHHHHcCCcccccCCccCCCHHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLV-PGTHVQIDKLLSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLV-hGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
.+++|||+||++|++++ +.+++++|+.++..|+++||| ||++.+.+..+ ++.. +..+...+++
T Consensus 9 ~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l---~~~~------~~~~~~~~~a 79 (266)
T PRK12314 9 AKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKL---KLDK------RPTSLAEKQA 79 (266)
T ss_pred CCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceee---cccc------CCCCHHHHHH
Confidence 46899999999998542 688999999999999999987 66665555433 2221 1123344555
Q ss_pred H-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHh
Q 007275 171 A-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (609)
Q Consensus 171 ~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~ 249 (609)
+ ...+..++..+.. .|+++|++ +.++...+.+|-..++ .....++|++||+
T Consensus 80 ~aa~Gq~~l~~~~~~---------~~~~~g~~----~~q~llT~~~~~~~~~---------------~~~~~~~l~~ll~ 131 (266)
T PRK12314 80 LAAVGQPELMSLYSK---------FFAEYGIV----VAQILLTRDDFDSPKS---------------RANVKNTFESLLE 131 (266)
T ss_pred HHHHhHHHHHHHHHH---------HHHHcCCe----EEEEEEecccccchHH---------------HHHHHHHHHHHHH
Confidence 4 4555555555555 46889986 3344444444432221 2345679999999
Q ss_pred CCCeEEEcCCccCCCCc--EEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCH--HHHHHHHHh
Q 007275 250 GGCLVILSNLGYSSSGE--VLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQ 318 (609)
Q Consensus 250 ~G~IPVi~~~~~~~~ge--~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~--~e~~~l~~~ 318 (609)
.|+|||+++++.....+ ..++|+|.+|++||.+|+||+|+|+|||||++ |++++|++|+. .+..++...
T Consensus 132 ~g~IPVv~~nd~v~~~~~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~~~~ 211 (266)
T PRK12314 132 LGILPIVNENDAVATDEIDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILALAGG 211 (266)
T ss_pred CCCEEEEcCCCCeeeccccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHHhcc
Confidence 99999999876544333 34779999999999999999999999999984 35888888864 232222110
Q ss_pred hchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhccc
Q 007275 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (609)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~ 398 (609)
.++.+++| |
T Consensus 212 --------------------------------------------------~~~~~~tG-G-------------------- 220 (266)
T PRK12314 212 --------------------------------------------------AGSKFGTG-G-------------------- 220 (266)
T ss_pred --------------------------------------------------CCCCcccC-c--------------------
Confidence 12234555 5
Q ss_pred CCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 399 ~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|.+|++||..|.+.|++ ++|+||+.++. +.++++++..||.|.+
T Consensus 221 -M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-i~~~l~g~~~GT~i~~ 264 (266)
T PRK12314 221 -MVTKLKAAKFLMEAGIK-MVLANGFNPSD-ILDFLEGESIGTLFAP 264 (266)
T ss_pred -hHHHHHHHHHHHHCCCe-EEEEcCCCchH-HHHHHcCCCCceEEcc
Confidence 99999999999999998 99999999986 6778888889999975
|
|
| >KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=237.97 Aligned_cols=244 Identities=20% Similarity=0.212 Sum_probs=181.8
Q ss_pred CeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCH-----H
Q 007275 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDS-----E 166 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~-----~ 166 (609)
++||||+|+++++++. +..++++++.|+..|++|+||++|+.+.+ +.++..+.......|-+-. .
T Consensus 10 ~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G--~qrLr~~~~~s~s~r~~l~~~~~l~ 87 (285)
T KOG1154|consen 10 YRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFG--RQRLRQELLPSSSMRQTLKPQSELA 87 (285)
T ss_pred eEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhh--HHHhhhhhccchhHHHhhCCccchh
Confidence 6899999999998854 46789999999999999999999965554 4555554333222222111 1
Q ss_pred HHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHH
Q 007275 167 SLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMR 245 (609)
Q Consensus 167 ~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~ 245 (609)
..+++ ++.++.++..++.. |.++|+. ..++...+.+|..-..+ +.-..+|+
T Consensus 88 e~rA~AAvGQ~~Lmalye~l---------F~Qy~~~----iAQvLvT~~Di~d~~~r---------------~Nl~~Ti~ 139 (285)
T KOG1154|consen 88 EKRACAAVGQSGLMALYETL---------FTQYGIT----IAQVLVTRNDILDEQQR---------------KNLQNTIS 139 (285)
T ss_pred hHHHHHHhCcchHHHHHHHH---------HHHhccc----hheeeecCcchhhHHHH---------------HHHHHHHH
Confidence 22222 56677777777664 6899987 44555555555542221 23356899
Q ss_pred HHHhCCCeEEEcCCccCCCCcEEEec---HHHHHHHHHHHcCCCEEEEEecccccCC---CC---ccccccCHHHHHHHH
Q 007275 246 ERLDGGCLVILSNLGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILDE---SG---HLIRFLTLQEADSLI 316 (609)
Q Consensus 246 ~LL~~G~IPVi~~~~~~~~ge~~~id---~D~lAa~lA~~L~Ad~LIiLTDvdgv~~---~~---~lI~~it~~e~~~l~ 316 (609)
+||..|+|||+|+|+..+.-++.|.| ||.+|+.+|..++||.||+||||||++. +. ++|+..+..
T Consensus 140 eLL~m~viPIvNeNDavs~~~~~~~D~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~------ 213 (285)
T KOG1154|consen 140 ELLSMNVIPIVNENDAVSPREIPFGDSSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPG------ 213 (285)
T ss_pred HHHhCCceeeecCCCccCCcccccCCCCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccC------
Confidence 99999999999999988877888888 9999999999999999999999999963 33 333332211
Q ss_pred HhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhc
Q 007275 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (609)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~ 396 (609)
| ....-+|+.++.+|+| |
T Consensus 214 ---------------------------~----------------~~v~~tfG~~SkvGtG-G------------------ 231 (285)
T KOG1154|consen 214 ---------------------------D----------------PQVSTTFGSKSKVGTG-G------------------ 231 (285)
T ss_pred ---------------------------C----------------CCCccccCccCccCcC-c------------------
Confidence 0 0123478899999999 8
Q ss_pred ccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 397 ~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||.||..|..+||. |.|.+|..+.+ +..++.+..+||.|...
T Consensus 232 ---M~tKv~AA~~A~~~Gv~-viI~~g~~p~~-I~~iv~g~kvgt~f~~~ 276 (285)
T KOG1154|consen 232 ---METKVKAAVNALNAGVS-VIITNGDAPEN-ITDIVEGKKVGTFFEQL 276 (285)
T ss_pred ---chhhHHHHHHHhcCCce-EEEeCCCChHH-HHHHHhhhhhhhhhhhc
Confidence 99999999999999998 89999999984 77888888899998753
|
|
| >TIGR01027 proB glutamate 5-kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=257.88 Aligned_cols=235 Identities=16% Similarity=0.210 Sum_probs=172.6
Q ss_pred CeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-
Q 007275 100 GTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA- 171 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~- 171 (609)
+++|||+||++|++++ +..++++|+.++..|+++|||||||. ...+..++++..+ .+....+++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~--~~g~~~lg~~~~~------~~l~~~qa~a 72 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAI--AAGFEALGLPERP------KTLAEKQALA 72 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHH--hcCccccCCCCCc------cchHHHHHHH
Confidence 4799999999999854 67899999999999999999999974 4455566665422 222233333
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeee-CHHHHHHHHhC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV-DVTRMRERLDG 250 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v-~~~~I~~LL~~ 250 (609)
...+..++..+... |.++|++ +.++...+.+|...+ +.. ..++|+.||+.
T Consensus 73 a~Gq~~l~~~~~~~---------l~~~Gi~----~aqillt~~d~~~~~----------------~~lna~~~i~~Ll~~ 123 (363)
T TIGR01027 73 AVGQVRLMQLYEQL---------FSQYGIK----VAQILLTRADFSDRE----------------RYLNARNTLEALLEL 123 (363)
T ss_pred HhChHHHHHHHHHH---------HHHcCCe----EEEEEEeccchhhHH----------------HHHHHHHHHHHHHhC
Confidence 34444555555554 6889987 455544444333211 112 23789999999
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHH--HHHHHHHhhch
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ--EADSLIRQRVK 321 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~--e~~~l~~~~~~ 321 (609)
|+|||+++++.....++.++|+|.+|+++|.+++||+|+|+|||||++ |++++|++++.. +++.+ ..+
T Consensus 124 g~iPVi~end~v~~~~l~~gd~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i-~~~-- 200 (363)
T TIGR01027 124 GVVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGV-AGD-- 200 (363)
T ss_pred CCEEEEeCCCceeeeecCcCChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHh-hcC--
Confidence 999999987766555666889999999999999999999999999984 357999999753 22222 111
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
.++++++| | |.
T Consensus 201 -----------------------------------------------~~~~~gtG-G---------------------M~ 211 (363)
T TIGR01027 201 -----------------------------------------------SGSSVGTG-G---------------------MR 211 (363)
T ss_pred -----------------------------------------------CCcCcCcC-C---------------------ch
Confidence 12335555 5 99
Q ss_pred HHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
+||+||..|.+.|++ ++|+|+..++ .|.++++++..||.|.+
T Consensus 212 ~Kl~Aa~~a~~~gi~-v~I~~g~~~~-~l~~~l~g~~~GT~i~~ 253 (363)
T TIGR01027 212 TKLQAADLATRAGVP-VIIASGSKPE-KIADALEGAPVGTLFHA 253 (363)
T ss_pred HHHHHHHHHHHCCCe-EEEEeCCCcc-HHHHHhcCCCCcEEEee
Confidence 999999999999998 9999999887 46777888889999976
|
Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family. |
| >cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=226.99 Aligned_cols=188 Identities=17% Similarity=0.225 Sum_probs=153.0
Q ss_pred EEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEEC-ChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHHHH
Q 007275 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179 (609)
Q Consensus 102 iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhG-gG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i~ 179 (609)
+|||+||+++.++. +++++++|+.+++.|+++||||| +|+.++.+++..+....+ .+.+.++++......++
T Consensus 2 iViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~~~------~~~~~~~~i~~~Ge~~~ 75 (239)
T cd04246 2 IVQKFGGTSVADIERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVSPR------PSPRELDMLLSTGEQIS 75 (239)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhccC------CCHHHHHHHHHHhHHHH
Confidence 79999999998755 79999999999999999999999 688889888877765432 25666776633322445
Q ss_pred HH-HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcC
Q 007275 180 MM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (609)
Q Consensus 180 ~~-l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~ 258 (609)
.. +.+. |+++|++ ++++++.+..+++..+ ++ .|++..++.+.|++++++|.|||+++
T Consensus 76 ~~~~~~~---------l~~~g~~----a~~l~~~~~~l~~~~~--------~~-~~~~~~~~~~~l~~ll~~g~ipVi~g 133 (239)
T cd04246 76 AALLAMA---------LNRLGIK----AISLTGWQAGILTDDH--------HG-NARIIDIDPKRILEALEEGDVVVVAG 133 (239)
T ss_pred HHHHHHH---------HHhCCCC----eEEeccccCCEEecCC--------CC-ceeechhhHHHHHHHHhcCCEEEEcC
Confidence 44 4443 6899988 8899888877776543 21 46778889999999999999999999
Q ss_pred C-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 259 L-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 259 ~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
. +.+.+|+++++ |+|.+|+.+|.+|+||+|+|+|||||++ +++++|++++.+|++++..
T Consensus 134 ~~~~~~~g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~ 203 (239)
T cd04246 134 FQGVNEDGEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMAS 203 (239)
T ss_pred ccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHh
Confidence 6 66778889988 8999999999999999999999999984 3689999999999888753
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati |
| >cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=226.84 Aligned_cols=190 Identities=17% Similarity=0.208 Sum_probs=152.2
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECC-hHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHHH
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGg-G~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i 178 (609)
.+|||+||+++.+++ +++++++|+.+++.|+++|||||| |+.+.++++...... +.++...++++......+
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~------~~~~~~~~~~i~a~Ge~~ 74 (239)
T cd04261 1 LIVQKFGGTSVASIERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS------PRPPARELDVLLSTGEQV 74 (239)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc------cCCCHHHHHHHHHHHHHH
Confidence 389999999998755 799999999999999999999997 667776665422111 345677777764444466
Q ss_pred HHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcC
Q 007275 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (609)
Q Consensus 179 ~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~ 258 (609)
+..+... .|+++|++ ++++++.+..+++..+ + ..|++..++.+.|+.+++.|.|||+++
T Consensus 75 ~~~l~~~--------~l~~~g~~----a~~l~~~~~~l~~~~~--------~-~~~~i~~~~~~~l~~ll~~~~ipVi~G 133 (239)
T cd04261 75 SIALLAM--------ALNRLGIK----AISLTGWQAGILTDGH--------H-GKARIIDIDPDRIRELLEEGDVVIVAG 133 (239)
T ss_pred HHHHHHH--------HHHhCCCC----eEEechhhCCEEecCC--------C-CcceechhhHHHHHHHHHcCCeEEEcC
Confidence 6664333 36899988 8899988877776543 2 157777788999999999999999999
Q ss_pred C-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 259 L-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 259 ~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
. +.+.+|+++++ |+|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|++++..
T Consensus 134 ~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~ 203 (239)
T cd04261 134 FQGINEDGDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMAS 203 (239)
T ss_pred ccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHh
Confidence 7 66788999999 9999999999999999999999999984 2689999999999888753
|
In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and |
| >cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-25 Score=223.15 Aligned_cols=190 Identities=18% Similarity=0.232 Sum_probs=155.1
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEE-----CChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHH
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEA 174 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVh-----GgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~ 174 (609)
.+|||+||+++++++ +++++++|+.+.+.|+++|||| |||+++...+..++... +.|+|+ +.++.+ .+
T Consensus 1 ~~ViK~GGs~l~~~~~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~----~~~~t~-~~~~~~-~~ 74 (244)
T cd04260 1 IIVQKFGGTSVSTKERREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE----NSDISP-RELDLL-MS 74 (244)
T ss_pred CEEEEECchhcCCHHHHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh----cCCCCH-HHHHHH-HH
Confidence 379999999998876 7899999999999999888887 78888888766655332 446655 456666 44
Q ss_pred HHHHHH--HHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCC
Q 007275 175 AGGIRM--MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (609)
Q Consensus 175 ~g~i~~--~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~ 252 (609)
.|+.+. .+++. |+++|++ ++++++.+..++++.. ++ .|++..++.+.|+.+|+.|+
T Consensus 75 ~Ge~~~~~~~~~~---------l~~~Gi~----a~~l~~~~~~lit~~~--------~~-~~~v~~~~~~~l~~ll~~g~ 132 (244)
T cd04260 75 CGEIISAVVLTST---------LRAQGLK----AVALTGAQAGILTDDN--------YS-NAKIIKVNPKKILSALKEGD 132 (244)
T ss_pred HhHHHHHHHHHHH---------HHhCCCC----eEEechHHcCEEecCC--------CC-ceeeeccCHHHHHHHHhCCC
Confidence 666554 35554 6899988 8999999888877553 22 46778889999999999999
Q ss_pred eEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 253 LVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 253 IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
|||+++. +.+.+|+++++ ++|.+|+.+|.+|+||+|+|+|||||++ +++++|++|+.+|+++++..
T Consensus 133 VPVv~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~ 209 (244)
T cd04260 133 VVVVAGFQGVTEDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQ 209 (244)
T ss_pred EEEecCCcccCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHc
Confidence 9999996 67788999998 6999999999999999999999999984 36899999999999998754
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=253.76 Aligned_cols=247 Identities=17% Similarity=0.163 Sum_probs=171.2
Q ss_pred CCeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECC-hHHHhHHHHHcCCccc-ccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAK-YLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGg-G~~i~~~l~~~g~~~~-~~~g~rvt~~~~l~ 169 (609)
.++||||+||++|++++ +.+++++|+.|++.|++||||.+| +.+.+..+...+.... +.+-.+.++...++
T Consensus 7 ~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~q 86 (715)
T TIGR01092 7 VKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPELDGK 86 (715)
T ss_pred CCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCchHHHH
Confidence 47999999999998854 688999999999999999996665 3333333332222110 00001233344444
Q ss_pred HH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 170 ~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
++ .+.+..+...+.. .|.++++. ..++...+.+|-..++ .....++|+.||
T Consensus 87 a~aa~gq~~L~~~y~~---------~f~~~~i~----~aQ~Llt~~d~~~~~~---------------~~~~~~~l~~lL 138 (715)
T TIGR01092 87 ACAAVGQSGLMALYET---------MFTQLDIT----AAQILVTDLDFRDEQF---------------RRQLNETVHELL 138 (715)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHcCCe----eEEEEechhhcccHHH---------------HHHHHHHHHHHH
Confidence 44 4555555444444 36778876 4444444433332221 123567999999
Q ss_pred hCCCeEEEcCCccCCCCc-------EEEecHHHHHHHHHHHcCCCEEEEEecccccC------CCCccccccCHHHHHHH
Q 007275 249 DGGCLVILSNLGYSSSGE-------VLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADSL 315 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge-------~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~------~~~~lI~~it~~e~~~l 315 (609)
+.|+|||+++++...+.+ -+|+|+|.+|++||.+|+||+|+|+|||||++ +++++|++++..+.+..
T Consensus 139 ~~g~iPVin~nD~V~~~~~~~~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~ 218 (715)
T TIGR01092 139 RMNVVPVVNENDAVSTRAAPYSDSQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGE 218 (715)
T ss_pred HCCCEEEEcCCCcccccccccccccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhh
Confidence 999999999877654332 24999999999999999999999999999985 35889998886544322
Q ss_pred HHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhh
Q 007275 316 IRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (609)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~ 395 (609)
+.. +..+.+++| |
T Consensus 219 i~~-------------------------------------------------~~~~~~~tG-G----------------- 231 (715)
T TIGR01092 219 ITF-------------------------------------------------GTKSRLGRG-G----------------- 231 (715)
T ss_pred hcc-------------------------------------------------CcccccCCC-C-----------------
Confidence 211 112234455 5
Q ss_pred cccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 396 ~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||+||..|.+.|++ ++|++|..++. |.++++++..||.|.++
T Consensus 232 ----M~~Kl~aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~~~~~ 276 (715)
T TIGR01092 232 ----MTAKVKAAVWAAYGGTP-VIIASGTAPKN-ITKVVEGKKVGTLFHED 276 (715)
T ss_pred ----chHHHHHHHHHHHCCCe-EEEeCCCCcch-HHHHhcCCCCceEeccc
Confidence 99999999999999997 99999998885 67777888899999864
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >COG1608 Predicted archaeal kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=211.72 Aligned_cols=237 Identities=16% Similarity=0.186 Sum_probs=168.2
Q ss_pred EEEEeCCcccCCCC---------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHH
Q 007275 102 FVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (609)
Q Consensus 102 iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (609)
+|+|||||+||+++ +.+++.+|+. ..-.++|||||||+|.|..+++++++ ...+ ...+.....++
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGgGSFGHp~Ak~~~~~-~~~~---~~s~~G~~~~~ 76 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGGGSFGHPAAKEFGLE-GLKN---YLSPLGFSLTH 76 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecCccccCHHHHHhCcc-cccc---ccCccchHHHH
Confidence 89999999999976 3455555553 33347899999999999999999993 2111 12333444557
Q ss_pred HHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCC
Q 007275 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (609)
Q Consensus 173 ~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~ 252 (609)
.++.+++..+++. |.++|+. ++...+.+ |.+ +.|++..-..+.|+.+|+.|+
T Consensus 77 ~am~~L~~~V~~~---------l~~~Gv~----av~~~P~s--~~~-------------~~gr~~~~~l~~i~~~l~~gf 128 (252)
T COG1608 77 LAMLELNSIVVDA---------LLDAGVR----AVSVVPIS--FST-------------FNGRILYTYLEAIKDALEKGF 128 (252)
T ss_pred HHHHHHHHHHHHH---------HHhcCCc----cccccCcc--eee-------------cCCceeechHHHHHHHHHcCC
Confidence 7888999999886 4788887 33322222 111 123333345779999999999
Q ss_pred eEEEcCCcc-CCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC-CCccccccC-HHHHHHHHHhhchhhhhHhhh
Q 007275 253 LVILSNLGY-SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLT-LQEADSLIRQRVKQSEIAANY 329 (609)
Q Consensus 253 IPVi~~~~~-~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~-~~~lI~~it-~~e~~~l~~~~~~~~~~~~~~ 329 (609)
|||+.+... +++..+.++++|+++.+||+.|++|+++|+|||||+++ +...++++. .++++.+..-+.
T Consensus 129 vPvl~GDVv~d~~~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~~~g--------- 199 (252)
T COG1608 129 VPVLYGDVVPDDDNGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVALGG--------- 199 (252)
T ss_pred EeeeecceEEcCCCceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhhhcC---------
Confidence 999998654 44557889999999999999999999999999999853 444444443 345544321110
Q ss_pred hhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHH
Q 007275 330 VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 409 (609)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~ 409 (609)
+ + + -..+|| |..||+++..
T Consensus 200 -----------------------------------------s----~-~------~DVTGG---------i~~Kl~~~~~ 218 (252)
T COG1608 200 -----------------------------------------S----G-G------TDVTGG---------IAKKLEALLE 218 (252)
T ss_pred -----------------------------------------c----C-c------ccchhh---------HHHHHHHHHH
Confidence 0 0 0 012233 9999999999
Q ss_pred HHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 410 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 410 a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
..+.|.. |+++||..+++| .+.+.++.+||.|.
T Consensus 219 ~~~~~~~-vyi~ng~~~~ni-~~~l~G~~vGT~I~ 251 (252)
T COG1608 219 IARYGKE-VYIFNGNKPENI-YRALRGENVGTRID 251 (252)
T ss_pred HHhcCce-EEEECCCCHHHH-HHHhcCCCCceEec
Confidence 9999988 999999999974 55557899999985
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=247.99 Aligned_cols=245 Identities=16% Similarity=0.133 Sum_probs=173.4
Q ss_pred CCeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccccc----CCccCCCHHH
Q 007275 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL----GRYRITDSES 167 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~----~g~rvt~~~~ 167 (609)
.|++|||+||++|++++ +.+++++|+.|++.|++||||+|| +++.....+++..... +-.+.+....
T Consensus 15 ~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSg--a~~~g~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (718)
T PLN02418 15 VKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSG--AVGVGRQRLRYRRLVNSSFADLQKPQMELD 92 (718)
T ss_pred CCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecc--hHHHHHHHHhhhhhhhcccccCCCCcchHH
Confidence 47999999999998754 688999999999999999999999 4444444454432100 0001111112
Q ss_pred HHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHH
Q 007275 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRE 246 (609)
Q Consensus 168 l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~ 246 (609)
.+++ ...+..++..+.. .|+++|++ +.++...+.+|-..+. .....++|+.
T Consensus 93 ~qa~aa~Gq~~l~~~~~~---------~f~~~g~~----~~qillT~~~~~~~~~---------------~~~~~~~l~~ 144 (718)
T PLN02418 93 GKACAAVGQSELMALYDT---------LFSQLDVT----ASQLLVTDSDFRDPDF---------------RKQLSETVES 144 (718)
T ss_pred HHHHHHhhHHHHHHHHHH---------HHHHcCCe----EEEEEecHhHhcchhH---------------hHhHHHHHHH
Confidence 2232 4444444444444 47889986 5555555544443221 2345679999
Q ss_pred HHhCCCeEEEcCCccCCCCc-------EEEecHHHHHHHHHHHcCCCEEEEEecccccC------CCCccccccCHHHHH
Q 007275 247 RLDGGCLVILSNLGYSSSGE-------VLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEAD 313 (609)
Q Consensus 247 LL~~G~IPVi~~~~~~~~ge-------~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~------~~~~lI~~it~~e~~ 313 (609)
||+.|+|||+++++...+.+ ..|+|+|.+|+++|.+++||+|+|+|||||++ +++++|++++..+.+
T Consensus 145 ll~~g~iPVv~~nd~v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~ 224 (718)
T PLN02418 145 LLDLRVIPIFNENDAVSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQ 224 (718)
T ss_pred HHHCCCEEEEcCCCCccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchh
Confidence 99999999999986654323 27899999999999999999999999999984 347888888765443
Q ss_pred HHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccch
Q 007275 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (609)
Q Consensus 314 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~ 393 (609)
..+..+ ..+..++| |
T Consensus 225 ~~i~~~-------------------------------------------------~~s~~~tG-G--------------- 239 (718)
T PLN02418 225 DEITFG-------------------------------------------------EKSRVGRG-G--------------- 239 (718)
T ss_pred hhhhcc-------------------------------------------------cccccCCC-C---------------
Confidence 322111 12233455 5
Q ss_pred hhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 394 ~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||+||..+.++|++ ++|+||+.++. |.++++++..||.|.++
T Consensus 240 ------M~~Kl~Aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 284 (718)
T PLN02418 240 ------MTAKVKAAVNAASAGIP-VVITSGYALDN-IRKVLRGERVGTLFHQD 284 (718)
T ss_pred ------cHHHHHHHHHHHHCCCc-EEEeCCCCcch-HHHHhcCCCCceEeccc
Confidence 99999999999999997 99999999985 67788888899999875
|
|
| >cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-23 Score=208.11 Aligned_cols=176 Identities=20% Similarity=0.232 Sum_probs=139.4
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHH-HH
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG-GI 178 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g-~i 178 (609)
++|||+||+++.+++ +++++++|+.+ ..|+++||||||++.++..+..+. .+.+.| .+
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~-------------------~~~s~Ge~~ 60 (227)
T cd04234 1 MVVQKFGGTSVASAERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA-------------------LLLSFGERL 60 (227)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH-------------------HHHHHHHHH
Confidence 479999999998765 78999999999 889999999999888776654432 223333 34
Q ss_pred HHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC-CCeEEEc
Q 007275 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG-GCLVILS 257 (609)
Q Consensus 179 ~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~-G~IPVi~ 257 (609)
+..+... .|+++|++ +..+++.+..+... ++++.+.+..++.+.|+++++. |.|||++
T Consensus 61 ~~~l~~~--------~l~~~Gi~----a~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~ 119 (227)
T cd04234 61 SARLLAA--------ALRDRGIK----ARSLDARQAGITTD---------DNHGAARIIEISYERLKELLAEIGKVPVVT 119 (227)
T ss_pred HHHHHHH--------HHHHCCCC----eEEeCHHHCCEEcC---------CccchhhHHHHHHHHHHHHHhhCCCEEEec
Confidence 5555443 47889987 77777666444332 3345666777889999999999 9999999
Q ss_pred C-CccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 258 N-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 258 ~-~~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
+ .+.+..|++.++ ++|.+|+.+|.+|+||+|+|+|||||++ +++++|++++.+|++++..
T Consensus 120 g~i~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~ 190 (227)
T cd04234 120 GFIGRNEDGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAY 190 (227)
T ss_pred CceecCCCCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHh
Confidence 9 466778888777 7999999999999999999999999984 3589999999999988764
|
AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd |
| >PRK00358 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=204.50 Aligned_cols=215 Identities=19% Similarity=0.169 Sum_probs=153.4
Q ss_pred CeEEEEeCCcccCCC-----C---hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHH-cCCcccccCCccCCCHHHHHH
Q 007275 100 GTFVVIISGEIVSSP-----Y---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE-RGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 100 k~iVIKlGGsvl~~~-----~---l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~-~g~~~~~~~g~rvt~~~~l~~ 170 (609)
+++|||+||++|+++ + +++++++|+.+...|+++|||||||++++..... .++ +...++.
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~~a~~~~~~~~~~-----------~~~~~~~ 69 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGNIFRGYIGAAAGM-----------DRATADY 69 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHhhcCC-----------ChhhHHH
Confidence 479999999999842 1 6789999999999999999999999887665321 222 2234555
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~ 250 (609)
..++..++|..+... .|+++|++ +..++... +++.+. ....+.+.++|+.
T Consensus 70 ~~~~~~~l~~~ll~~--------~l~~~Gi~----a~~~~~~~----------------~~~~~~--~~~~~~~~~~l~~ 119 (231)
T PRK00358 70 MGMLATVMNALALQD--------ALERAGVD----TRVQSAIP----------------MPQVAE--PYIRRRAIRHLEK 119 (231)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----eEEechhh----------------cccccC--cccHHHHHHHHHC
Confidence 544566788754443 46888986 32211111 111111 1234578899999
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~ 323 (609)
|.|||+++.. + .-+.++|.+|+++|.+|+||+|+|+|||||++ +++++|++++.+|+.++ +.
T Consensus 120 g~vPVv~g~~----~-~~~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---g~--- 188 (231)
T PRK00358 120 GRVVIFAAGT----G-NPFFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---GL--- 188 (231)
T ss_pred CCEEEEECCC----C-CCCCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---CC---
Confidence 9999997522 1 11458999999999999999999999999984 36899999987764322 11
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
...+
T Consensus 189 ----------------------------------------------------------------------------~~~d 192 (231)
T PRK00358 189 ----------------------------------------------------------------------------KVMD 192 (231)
T ss_pred ----------------------------------------------------------------------------cchh
Confidence 2236
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+.++..|.+.|++ ++|+||..++. |..+++++..||.|.
T Consensus 193 ~~a~~~a~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 231 (231)
T PRK00358 193 ATAISLARDNKIP-IIVFNMNKPGN-LKRVVKGEHIGTLVS 231 (231)
T ss_pred HHHHHHHHHcCCc-EEEECCCCchH-HHHHHCCCCCCEEeC
Confidence 7788888899997 99999999985 566777888999873
|
|
| >cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=204.93 Aligned_cols=214 Identities=18% Similarity=0.164 Sum_probs=155.7
Q ss_pred eEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHH-HhHHHHHcCCcccccCCccCCCHHHHHHHH
Q 007275 101 TFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~-i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (609)
++|||+||+++++++ ++++++.|+.+.+.|+++|||||||.+ .+.....+++. +..++...
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~~-----------~~~~~~~~ 69 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMP-----------RATADYIG 69 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCCC-----------hhhHHHHH
Confidence 589999999998842 678899999888889999999998885 34333333332 12234444
Q ss_pred HHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCC
Q 007275 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (609)
Q Consensus 173 ~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~ 252 (609)
.....++..+++. .|.++|++ +..++..+-... ....+.+.+..+|+.|.
T Consensus 70 ~~~~~l~~~l~~~--------~l~~~Gi~----a~~~~~~~~~~~------------------~~~~~~~~l~~~l~~g~ 119 (229)
T cd04239 70 MLATVMNALALQD--------ALEKLGVK----TRVMSAIPMQGV------------------AEPYIRRRAIRHLEKGR 119 (229)
T ss_pred HHHHHHHHHHHHH--------HHHHcCCC----EEEeCHHHHhhh------------------hccccHHHHHHHHhCCC
Confidence 4444667767554 46888987 455444321100 11246788999999999
Q ss_pred eEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhh
Q 007275 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEI 325 (609)
Q Consensus 253 IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~ 325 (609)
|||+++.. | ..+.++|.+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++..
T Consensus 120 ipVi~g~~----g-~~~~~sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-------- 186 (229)
T cd04239 120 IVIFGGGT----G-NPGFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-------- 186 (229)
T ss_pred EEEEeCcc----C-CCCCCcHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc--------
Confidence 99999765 2 23458999999999999999999999999984 3589999999877665421
Q ss_pred HhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHH
Q 007275 326 AANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELA 405 (609)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~ 405 (609)
|..++.
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (229)
T cd04239 187 --------------------------------------------------------------------------KVMDAT 192 (229)
T ss_pred --------------------------------------------------------------------------CCccHH
Confidence 223456
Q ss_pred HHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 406 AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 406 aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
++..+.+.|++ ++|+|+..++. +.++++++..||.|.
T Consensus 193 a~~~~~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 229 (229)
T cd04239 193 ALTLCRRNKIP-IIVFNGLKPGN-LLRALKGEHVGTLIE 229 (229)
T ss_pred HHHHHHHCCCe-EEEECCCChhH-HHHHHcCCCCCeEeC
Confidence 67778888986 99999999986 577777778899874
|
Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als |
| >cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=205.39 Aligned_cols=212 Identities=20% Similarity=0.233 Sum_probs=152.4
Q ss_pred CeEEEEeCCcccCCCC---hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHH---HcCCcccccCCccCCCHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAME 173 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~---l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~---~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (609)
..+|||||||+|++++ +.+++++|+.+.+ +++++||||||.+.+.... .+|+ +...++....
T Consensus 31 ~~~ViKiGGSvitdk~~~~i~~la~~i~~~~~-~~~vilV~GGG~~~r~~~~~~~~~g~-----------~~~~~~~~~~ 98 (262)
T cd04255 31 DLNVVKIGGQSIIDRGAEAVLPLVEEIVALRP-EHKLLILTGGGTRARHVYSIGLDLGM-----------PTGVLAKLGA 98 (262)
T ss_pred CcEEEEeccceecCCcHHHHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHHHHHHcCC-----------CchHHHHHHH
Confidence 3699999999999875 7889999998876 7899999999998854321 2333 1223334444
Q ss_pred HHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCe
Q 007275 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (609)
Q Consensus 174 ~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~I 253 (609)
++..+|..+... .|..+|++ ++ ...+...++++|+.|+|
T Consensus 99 aa~~ln~lv~~~--------~l~~~g~~----~i-----------------------------~~~~~~~l~~lL~~g~v 137 (262)
T cd04255 99 SVSEQNAEMLAT--------LLAKHGGS----KV-----------------------------GHGDLLQLPTFLKAGRA 137 (262)
T ss_pred HHHHHHHHHHHH--------HHHHcCCC----cc-----------------------------ccccHHHHHHHHHCCCe
Confidence 555666666543 24566664 11 11244579999999999
Q ss_pred EEEcCCccC-------CCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhh
Q 007275 254 VILSNLGYS-------SSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 319 (609)
Q Consensus 254 PVi~~~~~~-------~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~ 319 (609)
||+++++.. ..|...++|+|.+|+++|.+|+||+|+++|||||++ +++++|++++.+++.++....
T Consensus 138 PVi~g~~~~~~~~i~~~~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~ 217 (262)
T cd04255 138 PVISGMPPYGLWEHPAEEGRIPPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD 217 (262)
T ss_pred EEEeCCcCCCeeeecCCCccCCCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC
Confidence 999998432 124467999999999999999999999999999984 368999999987665542110
Q ss_pred chhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccC
Q 007275 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (609)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~ 399 (609)
. .+ +| |
T Consensus 218 ~---------------------------------------------------~~-~~-~--------------------- 223 (262)
T cd04255 218 L---------------------------------------------------VL-ER-P--------------------- 223 (262)
T ss_pred C---------------------------------------------------CC-cH-H---------------------
Confidence 0 00 12 3
Q ss_pred CHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|.+|+++|. ++..++|+||+.++. |.+++.++..||.|.
T Consensus 224 ~~~~l~aa~-----~~~~v~I~~g~~~~~-L~~~l~g~~~GT~i~ 262 (262)
T cd04255 224 VLDLLQNAR-----HVKEVQIVNGLVPGN-LTRALRGEHVGTIIR 262 (262)
T ss_pred HHHHHHHhC-----CCCcEEEEeCCCCCH-HHHHHcCCCCceEeC
Confidence 888887763 223599999999985 677788888999874
|
The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK08210 aspartate kinase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-22 Score=216.90 Aligned_cols=191 Identities=16% Similarity=0.187 Sum_probs=154.2
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEE-----CChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVh-----GgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (609)
+++|||+||+++++++ ..+++++|+.+.+.|+++|||| ||||++...+..+..... +.++...++.+ .
T Consensus 2 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~-----~~~~~~~~~~l-~ 75 (403)
T PRK08210 2 KIIVQKFGGTSVSTEERRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF-----SEISKREQDLL-M 75 (403)
T ss_pred CeEEEeECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc-----cCCChHHHHHH-H
Confidence 6899999999999866 6889999999999999999999 677788777665443221 23455555554 5
Q ss_pred HHHHHHHH--HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 174 AAGGIRMM--IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 174 ~~g~i~~~--l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
+.|+++.. +.+ .|+++|++ +.++++.+..+++..+ ++ .+++..++.+.|+.+|+.|
T Consensus 76 ~~Ge~~s~~~~~~---------~l~~~Gi~----a~~l~~~~~~~~t~~~--------~~-~~~v~~~~~~~l~~~l~~~ 133 (403)
T PRK08210 76 SCGEIISSVVFSN---------MLNENGIK----AVALTGGQAGIITDDN--------FT-NAKIIEVNPDRILEALEEG 133 (403)
T ss_pred hHhHHHHHHHHHH---------HHHhCCCC----eEEechHHccEEccCC--------CC-ceeeehhhHHHHHHHHhcC
Confidence 66777654 444 36889988 8899888877777553 22 3677788999999999999
Q ss_pred CeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 252 CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 252 ~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
.|||+++. +.+..|+++++ ++|.+|+.+|.+|+||+++|+|||||++ +++++|++++.+|++++...
T Consensus 134 ~vpVi~G~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~ 211 (403)
T PRK08210 134 DVVVVAGFQGVTENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQ 211 (403)
T ss_pred CEEEeeCeeecCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHC
Confidence 99999997 67788999888 6999999999999999999999999984 36899999999999998754
|
|
| >PRK14558 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-22 Score=198.35 Aligned_cols=216 Identities=18% Similarity=0.178 Sum_probs=150.4
Q ss_pred CeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
+++|||+|||+|++++ +.+++++|+.+++.|+++|||||||.... .....++ +....+.+
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs~~~-g~~~~~~-----------~~~~~d~i 68 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGNLFR-GVELKEL-----------SPTRADQI 68 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccHHHH-HHhccCC-----------ChHHHHHH
Confidence 5799999999998753 57899999999999999999999987633 2111111 12223333
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
......+|..+... .|.++|++ ++.+.. ++.. +.+.....+.++.+|+.|
T Consensus 69 g~~~~~ln~~~~~~--------~l~~~gi~----a~~~~~----~~~~--------------~~~~~~~~~~i~~ll~~g 118 (231)
T PRK14558 69 GMLGTVINALYLKD--------IFEKSGLK----AVIVSQ----IVNL--------------PSVEPINYDDIELYFRAG 118 (231)
T ss_pred HHHHHHHHHHHHHH--------HHHHcCCC----eEEecc----cccc--------------chhhhhhHHHHHHHHHCC
Confidence 22223345443222 36889987 444332 1110 011123467999999999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhh
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSE 324 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~ 324 (609)
.|||++++.. ..++++|.+|+.+|..|+||.|+++|||||++ |++++|++++.+|+.++ +.
T Consensus 119 ~vpV~~G~~~-----~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g~---- 186 (231)
T PRK14558 119 YIVIFAGGTS-----NPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---GL---- 186 (231)
T ss_pred CEEEEECCCC-----CCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---Cc----
Confidence 9999998631 33568999999999999999999999999983 35899999997665443 11
Q ss_pred hHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHH
Q 007275 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (609)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl 404 (609)
. . | +.
T Consensus 187 ---------------------------------------------------~-~---------------------~--d~ 191 (231)
T PRK14558 187 ---------------------------------------------------K-V---------------------M--DT 191 (231)
T ss_pred ---------------------------------------------------c-c---------------------c--cH
Confidence 0 1 2 25
Q ss_pred HHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 405 ~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
.++..|.+.|++ ++|+|+..++.| ..++.++..||.|.++
T Consensus 192 ~a~~~a~~~gi~-v~I~ng~~~~~l-~~~l~g~~~GT~i~~~ 231 (231)
T PRK14558 192 EAFSICKKYGIT-ILVINFFEPGNL-LKALKGENVGTLVVPD 231 (231)
T ss_pred HHHHHHHHCCCC-EEEEeCCCCCHH-HHHHCCCCCcEEeCCC
Confidence 566777788997 999999999865 4555777899999764
|
|
| >PRK06635 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=212.03 Aligned_cols=191 Identities=18% Similarity=0.231 Sum_probs=149.2
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECC-hHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGg-G~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~ 177 (609)
+++|||+||+++.++. +++++++|+.+.+.|+++|||||| |+.++.+++....... .++...++.+......
T Consensus 2 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~Ge~ 75 (404)
T PRK06635 2 ALIVQKFGGTSVGDVERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVSP------LPDPRELDMLLSTGEQ 75 (404)
T ss_pred CeEEEeECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhcc------CCCHHHHHHHhhhhHH
Confidence 5799999999998865 799999999998889999988886 6777777665432111 1255566654332224
Q ss_pred HHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEc
Q 007275 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (609)
Q Consensus 178 i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~ 257 (609)
++..+... .|+++|++ +..+++.+..+++..+ |+ .+++..++.+.|+.+|+.|.|||++
T Consensus 76 ~~~~~~~~--------~l~~~g~~----a~~l~~~~~~~~~~~~--------~~-~~~~~~~~~~~l~~~l~~~~ipVi~ 134 (404)
T PRK06635 76 VSVALLAM--------ALQSLGVK----ARSFTGWQAGIITDSA--------HG-KARITDIDPSRIREALDEGDVVVVA 134 (404)
T ss_pred HHHHHHHH--------HHHhCCCC----eEEeChhhCCEEecCC--------CC-ceEeeecCHHHHHHHHhCCCEEEec
Confidence 55543333 36899988 7888887766666432 22 4677888999999999999999999
Q ss_pred CC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 258 NL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 258 ~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
+. +.+..|++.++ ++|.+|+++|.+|+||+|+++|||||++ +++++|++++.+|++++..
T Consensus 135 g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~ 205 (404)
T PRK06635 135 GFQGVDEDGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELAS 205 (404)
T ss_pred CccEeCCCCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHH
Confidence 94 67788999988 9999999999999999999999999984 4689999999999988853
|
|
| >TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=210.94 Aligned_cols=192 Identities=18% Similarity=0.220 Sum_probs=149.5
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHHH-
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI- 178 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i- 178 (609)
++|+|+||+++.+++ +++++++|+.+++.|+++||||||++.+...+.+++... . ..++++.+ .+.+......+
T Consensus 2 ~iViK~GGs~~~~~~~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~-~--~~~~~~~~-~~~i~~~Ge~~s 77 (401)
T TIGR00656 2 LIVQKFGGTSVGSGERIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKA-I--RDAITPRE-RDELVSHGERLS 77 (401)
T ss_pred cEEEEECCcCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHH-h--ccCCChHH-HHHHhhHHHHHH
Confidence 589999999998766 799999999998899999999999999888776654210 0 01344443 33332223334
Q ss_pred HHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCH-HHHHHHHhCCCeEEEc
Q 007275 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILS 257 (609)
Q Consensus 179 ~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~-~~I~~LL~~G~IPVi~ 257 (609)
+..+.. .|+++|++ ++++++.+..+++..+ ++ .+++..++. +.|+.+++.|.|||++
T Consensus 78 ~~~~~~---------~l~~~g~~----a~~l~~~~~~~~t~~~--------~~-~~~~~~~~~~~~l~~~l~~~~vpVi~ 135 (401)
T TIGR00656 78 SALFSG---------ALRDLGVK----AIWLDGGEAGIITDDN--------FG-NAKIDIIATEERLLPLLEEGIIVVVA 135 (401)
T ss_pred HHHHHH---------HHHhCCCc----eEEeccccceEEeCCC--------CC-ceEeeecchHHHHHHHHhCCCEEEec
Confidence 344444 46899988 8999988887777543 22 256677777 9999999999999999
Q ss_pred C-CccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 258 N-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 258 ~-~~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
+ .+.+..|+..++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.++...
T Consensus 136 g~~~~~~~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~ 207 (401)
T TIGR00656 136 GFQGATEKGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATF 207 (401)
T ss_pred CcceeCCCCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHc
Confidence 9 577777888876 6999999999999999999999999984 46889999999999998754
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases. |
| >PRK08841 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.1e-21 Score=205.73 Aligned_cols=193 Identities=17% Similarity=0.236 Sum_probs=151.8
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i 178 (609)
+++|+|+||+++.+++ +++++++|+.+.+.|.++|+||||++.....+..+..... +++++..++.+......+
T Consensus 2 ~~~V~KfGGtsv~~~~~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~-----~~~~~~~~d~l~s~GE~~ 76 (392)
T PRK08841 2 PLIVQKFGGTSVGSIERIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD-----SVPTARELDVLLSAGEQV 76 (392)
T ss_pred CeEEEeECcccCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc-----cCCCHHHHHHHHHHHHHH
Confidence 4799999999998865 7999999999999999999999998855444433333221 456777777765444445
Q ss_pred HHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcC
Q 007275 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (609)
Q Consensus 179 ~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~ 258 (609)
...+.+. .|++.|++ +..+++.+..+++... + ..+.+..++.+.|+.+++.|.|||+++
T Consensus 77 s~~lla~--------~L~~~Gi~----a~~l~~~~~~i~t~~~--------~-~~~~i~~~~~~~i~~ll~~~~vpVv~G 135 (392)
T PRK08841 77 SMALLAM--------TLNKLGYA----ARSLTGAQANIVTDNQ--------H-NDATIKHIDTSTITELLEQDQIVIVAG 135 (392)
T ss_pred HHHHHHH--------HHHhCCCC----eEEEehhHcCEEecCC--------C-CCceechhhHHHHHHHHhCCCEEEEeC
Confidence 5555444 47889988 7888887765555321 1 246777788899999999999999999
Q ss_pred C-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 259 L-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 259 ~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
. +.+.+|++.++ ++|.+|+.+|.+|+||.|+++|||||++ |++++|++++.+|+.++...
T Consensus 136 f~g~~~~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~ 206 (392)
T PRK08841 136 FQGRNENGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARK 206 (392)
T ss_pred CcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhc
Confidence 5 66788998888 9999999999999999999999999983 46899999999999888643
|
|
| >cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=194.91 Aligned_cols=215 Identities=20% Similarity=0.179 Sum_probs=151.4
Q ss_pred CeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHH-hHHHHHcCCcccccCCccCCCHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i-~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
+++||||||++|++++ +.+++++|+.+...|+++|||||||+++ +....+++ +.+.+ .+.
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~-------~~~~~----~d~ 69 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAG-------MDRAT----ADY 69 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcC-------CCchh----hhH
Confidence 5799999999998542 5788999998888889999999999875 21122222 22222 223
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~ 250 (609)
+..+..+++..+... .|+++|++ +..+++.+-+. . ...++.+.++.+|+.
T Consensus 70 ~g~~~~~~n~~ll~~--------~L~~~Gv~----a~~l~~~~~~~----------------~--~~~~~~~~l~~~l~~ 119 (231)
T cd04254 70 MGMLATVINALALQD--------ALESLGVK----TRVMSAIPMQG----------------V--AEPYIRRRAIRHLEK 119 (231)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----eEEEcHHHhhh----------------h--hcccCHHHHHHHHHC
Confidence 333455666644433 46888886 55554443111 1 124678899999999
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~ 323 (609)
|.|||+++. .| ...+++|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+... +.
T Consensus 120 g~ipV~~g~----~G-~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~---~~--- 188 (231)
T cd04254 120 GRVVIFAGG----TG-NPFFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSK---GL--- 188 (231)
T ss_pred CCEEEEECC----cC-CCCCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhc---ch---
Confidence 999999843 12 22558999999999999999999999999984 35889999998765321 11
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
..-+
T Consensus 189 ----------------------------------------------------------------------------~~~d 192 (231)
T cd04254 189 ----------------------------------------------------------------------------KVMD 192 (231)
T ss_pred ----------------------------------------------------------------------------hhhH
Confidence 1124
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+.++..|.+.|++ ++|++|..++.| ..++.++..||.|.
T Consensus 193 ~~a~~~a~~~gi~-~~I~~g~~~~~l-~~~l~g~~~GT~i~ 231 (231)
T cd04254 193 ATAFTLCRDNNLP-IVVFNINEPGNL-LKAVKGEGVGTLIS 231 (231)
T ss_pred HHHHHHHHHCCCe-EEEEeCCCccHH-HHHHCCCCCCEEeC
Confidence 6677778888987 999999999865 45556778999884
|
The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be |
| >COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-22 Score=184.04 Aligned_cols=147 Identities=39% Similarity=0.739 Sum_probs=139.0
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqG 529 (609)
+||.|+.+|++.|.+++.++...+++.+++.+.+...+..|++++++|.++||+++.++.+.+.++|.+++|+|+||++|
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G 81 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSG 81 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeeeCCcEEEEEeecccCccCeeeEEEEEECHHhcCCC
Confidence 68999999999999999999999999999999999999999999999999999999987889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeecchhHhhhhcccC-CCceeEEeecC
Q 007275 530 QGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKKLL 596 (609)
Q Consensus 530 iG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~-~~s~i~mkkll 596 (609)
+|.+|+++++..|++.|++++|+.|+.+..||+++||+.++.+.+|...+..|+++ +.++..+..++
T Consensus 82 ~G~~Ll~~~~~~Ar~~gi~~lf~LTt~~~~~F~~~GF~~vd~~~LP~~~~~~~~~~~~~~~~~~~~~~ 149 (153)
T COG1246 82 RGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVDKDELPEEVWSSYNFCERRSKCLAFDLL 149 (153)
T ss_pred cHHHHHHHHHHHHHHcCCceeeeeecccHHHHHHcCCeECccccCCHHHHHHHHhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 66666554443
|
|
| >TIGR02075 pyrH_bact uridylate kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=189.28 Aligned_cols=215 Identities=20% Similarity=0.159 Sum_probs=150.4
Q ss_pred CeEEEEeCCcccCCC-----C---hHHHHHHHHHHHhCCCeEEEEECChHHH-hHHHHHcCCcccccCCccCCCHHHHHH
Q 007275 100 GTFVVIISGEIVSSP-----Y---LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 100 k~iVIKlGGsvl~~~-----~---l~~l~~~Ia~L~~~G~~vVLVhGgG~~i-~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
+++|||+|||+|+++ + +++++++|+.+...|+++|||||||.+. +...++++.... . ++.
T Consensus 2 ~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~a~~~~~~~~--------~---~d~ 70 (233)
T TIGR02075 2 KRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVSAKELGIDRV--------T---ADY 70 (233)
T ss_pred CEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHHHHhcCCCCc--------c---HHH
Confidence 589999999999852 1 5788999998888899999999999753 322356554321 1 223
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~ 250 (609)
.......++..++.. .|.++|++ +..++..+-. + .......+.++.+|++
T Consensus 71 ~g~~~~~l~~~l~~~--------~L~~~Gi~----a~~l~~~~~~-----~-------------~~~~~~~~~i~~ll~~ 120 (233)
T TIGR02075 71 MGMLATVINGLALRD--------ALEKLGVK----TRVLSAISMP-----Q-------------ICESYIRRKAIKHLEK 120 (233)
T ss_pred HHHHHHHHHHHHHHH--------HHHhCCCC----cEEeccccCC-----C-------------CccccCHHHHHHHHHC
Confidence 322233455544322 36888987 5555544311 0 0012346789999999
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEec-ccccC-------CCCccccccCHHHHHHHHHhhchh
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTD-vdgv~-------~~~~lI~~it~~e~~~l~~~~~~~ 322 (609)
|+|||+++.. | ..++++|.+|+++|..|+||+|+|+|| |||++ +++++|++++.+|+... +.
T Consensus 121 g~VpV~~g~~----g-~~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~~-- 190 (233)
T TIGR02075 121 GKVVIFSGGT----G-NPFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---NL-- 190 (233)
T ss_pred CCEEEEECCC----C-CCCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---CH--
Confidence 9999987531 1 236889999999999999999999999 99983 35889999997765422 11
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHH
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~ 402 (609)
...
T Consensus 191 -----------------------------------------------------------------------------~~~ 193 (233)
T TIGR02075 191 -----------------------------------------------------------------------------KVM 193 (233)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 112
Q ss_pred HHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 403 kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
++.++..|.+.|++ ++|+||..++. |..++.++..||.|.
T Consensus 194 d~~~~~~a~~~~i~-v~i~~g~~~~~-l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 194 DLTAFALARDNNLP-IVVFNIDEPGA-LKKVILGKGIGTLVS 233 (233)
T ss_pred HHHHHHHHHHCCCe-EEEEeCCCcch-HHHHHCCCCCCEEeC
Confidence 46677778888986 99999999986 455557788999874
|
This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076. |
| >TIGR02076 pyrH_arch uridylate kinase, putative | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=187.32 Aligned_cols=210 Identities=16% Similarity=0.158 Sum_probs=149.2
Q ss_pred EEEEeCCcccCCC---C-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHH
Q 007275 102 FVVIISGEIVSSP---Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (609)
Q Consensus 102 iVIKlGGsvl~~~---~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~ 177 (609)
+||||||++|+++ + +.+++++|+.+... +++|||||||.+...+++. .... . .....++.......+
T Consensus 1 iViKlGGs~l~~~~~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~a~~~~~~---~~~~----~-~~~~~~~~~g~~~~~ 71 (221)
T TIGR02076 1 IVISLGGSVLSPEIDAEFIKEFANILRKLSDE-HKVGVVVGGGKTARRYIGV---AREL----G-ASETFLDEIGIDATR 71 (221)
T ss_pred CEEEechhhcCCCCCHHHHHHHHHHHHHHHhC-CeEEEEECCcHHHHHHHHH---HHHc----C-CCHHHHHHhhhHHHH
Confidence 5999999999875 2 78889999988766 8999999999987554321 1100 0 122344444444567
Q ss_pred HHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEc
Q 007275 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (609)
Q Consensus 178 i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~ 257 (609)
+|..+.+.| |...+++ .+. .+.....++|+.|.|||+.
T Consensus 72 ln~~~l~~l--------l~~~~~~----~~~------------------------------~~~~~~~~~l~~g~ipv~~ 109 (221)
T TIGR02076 72 LNAMLLIAA--------LGDDAYP----KVP------------------------------ENFEEALEAMSLGKIVVMG 109 (221)
T ss_pred HHHHHHHHH--------HHhcCCC----CcC------------------------------CCHHHHHHHHHcCCEEEEc
Confidence 777776653 3434443 110 0123456778899999999
Q ss_pred CCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHhhhh
Q 007275 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYV 330 (609)
Q Consensus 258 ~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~ 330 (609)
+.. . .+++|.+|+++|.+|+||+|+++|||||++ |++++|++++.+|+.++..+.
T Consensus 110 G~~---~----~~s~D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~----------- 171 (221)
T TIGR02076 110 GTH---P----GHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSS----------- 171 (221)
T ss_pred CCC---C----CCCcHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCC-----------
Confidence 752 1 378999999999999999999999999984 368999999988887765321
Q ss_pred hhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHH
Q 007275 331 KAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV 410 (609)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a 410 (609)
.+++|.+ |..|+.++..+
T Consensus 172 -----------------------------------------~~~~g~~---------------------~~~~~~a~~~~ 189 (221)
T TIGR02076 172 -----------------------------------------SVKAGSN---------------------EVVDPLAAKII 189 (221)
T ss_pred -----------------------------------------CccCCCC---------------------ceeHHHHHHHH
Confidence 1223312 66788888888
Q ss_pred HHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 411 ~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.+.|++ ++|++|..++.++ .++.++..||.|.
T Consensus 190 ~~~~i~-v~I~~g~~~~~l~-~~l~g~~~GT~i~ 221 (221)
T TIGR02076 190 ERSKIR-TIVVNGRDPENLE-KVLKGEHVGTIIE 221 (221)
T ss_pred HHCCCc-EEEECCCCccHHH-HHHCCCCCCeEeC
Confidence 888886 9999999998655 5677778899873
|
This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP. |
| >cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=187.49 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=151.2
Q ss_pred eEEEEeCCcccCCC---C-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHH
Q 007275 101 TFVVIISGEIVSSP---Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (609)
Q Consensus 101 ~iVIKlGGsvl~~~---~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g 176 (609)
++||||||++++++ + +.++++.|+.+.. |.++|||||||++.+.+.+....- .. +...++.......
T Consensus 1 ~iViKlGGs~l~~~~~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~~a~~~~~~~~~~-------~~-~~~~~d~~g~~~~ 71 (221)
T cd04253 1 RIVISLGGSVLAPEKDADFIKEYANVLRKISD-GHKVAVVVGGGRLAREYISVARKL-------GA-SEAFLDEIGIMAT 71 (221)
T ss_pred CEEEEeccceeCCCCChHHHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHHHc-------CC-CHHHHHHhcCHHH
Confidence 58999999999874 2 6788888887765 789999999999887764432100 00 1123344433345
Q ss_pred HHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEE
Q 007275 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (609)
Q Consensus 177 ~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi 256 (609)
.+|..+.+.+ .++|++ ++. ++.+.+..+|+.|.|||+
T Consensus 72 ~ln~~~~~~~---------l~~~~~----~~~------------------------------~~~~~~~~~l~~g~vpv~ 108 (221)
T cd04253 72 RLNARLLIAA---------LGDAYP----PVP------------------------------TSYEEALEAMFTGKIVVM 108 (221)
T ss_pred HHHHHHHHHH---------HhcCCC----cCC------------------------------CCHHHHHHHHHcCCeEEE
Confidence 7777776653 234443 111 134567889999999999
Q ss_pred cCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHhhh
Q 007275 257 SNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANY 329 (609)
Q Consensus 257 ~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~ 329 (609)
.+... ++++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.++....
T Consensus 109 ~G~~~-------~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~---------- 171 (221)
T cd04253 109 GGTEP-------GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS---------- 171 (221)
T ss_pred ECCCC-------CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC----------
Confidence 98532 357899999999999999999999999984 358999999988877764221
Q ss_pred hhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHH
Q 007275 330 VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 409 (609)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~ 409 (609)
.+..|.+ |..++.++..
T Consensus 172 ------------------------------------------~~~~g~~---------------------~~~d~~a~~~ 188 (221)
T cd04253 172 ------------------------------------------SWKAGSN---------------------EPFDPLAAKI 188 (221)
T ss_pred ------------------------------------------CcCCCCC---------------------cchHHHHHHH
Confidence 0111211 5667888888
Q ss_pred HHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 410 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 410 a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+.+.|++ ++|++|..++. |.++++++..||.|.
T Consensus 189 ~~~~gi~-~~I~~g~~p~~-l~~~l~g~~~GT~I~ 221 (221)
T cd04253 189 IERSGIK-TIVVDGRDPEN-LERALKGEFVGTIIE 221 (221)
T ss_pred HHHCCCe-EEEECCCCccH-HHHHHCCCCCCeEeC
Confidence 9999997 99999998984 667778888999873
|
The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi |
| >PRK07431 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-20 Score=209.05 Aligned_cols=191 Identities=18% Similarity=0.240 Sum_probs=144.3
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECC-hHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGg-G~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~ 177 (609)
+++|+|+||+++.+++ +++++++|+.+...|+++|||||+ |...+.++ +++.... ...+...++.+......
T Consensus 2 ~~iViKfGGss~~~~~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~-~~~~~~t-----~~~~~~~~~~~ls~Ge~ 75 (587)
T PRK07431 2 ALIVQKFGGTSVGSVERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELV-KLAKEIS-----SNPPRREMDMLLSTGEQ 75 (587)
T ss_pred CeEEEEECchhcCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHH-HHHHHhc-----cCCCHHHHHHHHHHhHH
Confidence 4799999999998765 799999999999999999999996 44444443 4432100 01122333333333345
Q ss_pred HHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEc
Q 007275 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (609)
Q Consensus 178 i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~ 257 (609)
++..+.+. .|+++|++ ++++++.+..+++... ++ .+++..++.+.|+++|+.|.|||++
T Consensus 76 ~s~~l~~~--------~l~~~gi~----a~~l~~~~~~~~~~~~--------~~-~~~i~~~~~~~l~~~l~~g~vpVv~ 134 (587)
T PRK07431 76 VSIALLSM--------ALHELGQP----AISLTGAQVGIVTESE--------HG-RARILEIKTDRIQRHLDAGKVVVVA 134 (587)
T ss_pred HHHHHHHH--------HHHHCCCC----eEEechhHcCeEecCC--------CC-ceeeeeccHHHHHHHHhCCCeEEec
Confidence 66666654 37899988 8899888877666432 23 3778888999999999999999999
Q ss_pred CC-cc--CCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 258 NL-GY--SSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 258 ~~-~~--~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
+. +. ...|++.++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.++..
T Consensus 135 g~~g~~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~ 207 (587)
T PRK07431 135 GFQGISLSSNLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELAS 207 (587)
T ss_pred CCcCCCCCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHh
Confidence 85 33 244777764 8999999999999999999999999984 3689999999999998864
|
|
| >PRK14557 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-18 Score=174.62 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=151.1
Q ss_pred CeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHH-hHHHHHcCCcccccCCccCCCHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i-~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
+++||||||++|.+++ ++++++.|+.+.+.|+++|||||||... +...+++++ +...++.
T Consensus 5 ~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~a~~~~~-----------~~~~~D~ 73 (247)
T PRK14557 5 KRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGI-----------DRVEADN 73 (247)
T ss_pred cEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHHHHhcCC-----------ChHHHHH
Confidence 6899999999997732 6788999998888999999999998633 344555543 2234566
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhc-CCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHh
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRH-GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~-G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~ 249 (609)
+.+...++|..+...+ |+.. +.. ++ +++.. .+......++...+...|+
T Consensus 74 ig~~g~~lna~ll~~~--------l~~~~~~~-----~~-------i~t~~----------~~~~~~~~~~~~~~~~~l~ 123 (247)
T PRK14557 74 IGTLGTIINSLMLRGV--------LTSKTNKE-----VR-------VMTSI----------PFNAVAEPYIRLRAVHHLD 123 (247)
T ss_pred HHHHHHHHHHHHHHHH--------HHhhhCCc-----ee-------EEecc----------ccccccchhhHHHHHHHHh
Confidence 6666777777666542 3432 221 11 12211 1111122344455777799
Q ss_pred CCCeEEEcCC-ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEE-ecccccC-------CCCccccccCHHHHHHHHHhhc
Q 007275 250 GGCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 250 ~G~IPVi~~~-~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiL-TDvdgv~-------~~~~lI~~it~~e~~~l~~~~~ 320 (609)
.|.|||+.+. +. -.+++|.+|+++|.+++||.|+++ |||||++ |++++|++++..|+. ..+.
T Consensus 124 ~g~VvV~~G~~g~------~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~---~~~~ 194 (247)
T PRK14557 124 NGYIVIFGGGNGQ------PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVV---RQNI 194 (247)
T ss_pred CCCEEEEECCcCC------CccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhc---ccCH
Confidence 9999999874 32 245689999999999999999999 5999983 468999999976542 1110
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
. -|
T Consensus 195 ---------------------------------------------------------~--------------------~~ 197 (247)
T PRK14557 195 ---------------------------------------------------------Q--------------------VM 197 (247)
T ss_pred ---------------------------------------------------------H--------------------HH
Confidence 0 03
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~ 447 (609)
. ..|+..|.+.|++ ++|+||..++. |..++.++..||.|.+..
T Consensus 198 ~--~~A~~~a~~~gi~-v~I~ng~~~~~-l~~~l~g~~~GT~i~~~~ 240 (247)
T PRK14557 198 D--QAALLLARDYNLP-AHVFNFDEPGV-MRRICLGEHVGTLINDDA 240 (247)
T ss_pred H--HHHHHHHHHCCCc-EEEEeCCCChH-HHHHHcCCCCcEEEecCc
Confidence 2 3477778889997 99999999985 566778888999998643
|
|
| >cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.1e-19 Score=173.62 Aligned_cols=149 Identities=19% Similarity=0.195 Sum_probs=107.7
Q ss_pred EEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHH---HcCCcccccCCccCCCHHHHHHHHHHHHHHH
Q 007275 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179 (609)
Q Consensus 103 VIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~---~~g~~~~~~~g~rvt~~~~l~~~~~~~g~i~ 179 (609)
|||||||.+.+ +..+.+.|..+. |++++||.|||++++.+.. ++|+ +....+...+++..+|
T Consensus 1 vvKiGGsl~~~--~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~~~~~~g~-----------~~~~ad~mgilat~~n 65 (203)
T cd04240 1 VVKIGGSLIRE--AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRRYQERKGL-----------SDAAAHWMAILAMEQY 65 (203)
T ss_pred CEEEccccccc--HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHHHHHHcCC-----------ChHHHHHHHHHHHHHH
Confidence 79999999855 566666665553 8999999999999665543 3343 3334444444444555
Q ss_pred HHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC
Q 007275 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (609)
Q Consensus 180 ~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~ 259 (609)
..+.+... ...+ .-+...+.+++..|.|||+.|.
T Consensus 66 a~~l~~~~--------~~~~--------------------------------------~~~~~~~~~~~~~g~ipV~~P~ 99 (203)
T cd04240 66 GYLLADLE--------PRLV--------------------------------------ARTLAELTDVLERGKIAILLPY 99 (203)
T ss_pred HHHHhccC--------Cccc--------------------------------------cCCHHHHHHHHHCCCcEEEeCc
Confidence 44433210 0000 0124578889999999999998
Q ss_pred cc----CCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHH
Q 007275 260 GY----SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEA 312 (609)
Q Consensus 260 ~~----~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~ 312 (609)
.. +..++.+|+|+|.+|+++|.+|+|++||++|||||++ .++++|++++.+|+
T Consensus 100 ~~~~~~~~~~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~da~~i~~i~~~e~ 157 (203)
T cd04240 100 RLLLDTDPLPHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKDGKLVNEIAAAEL 157 (203)
T ss_pred hhhcccCCCCcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCcCccccCHHHh
Confidence 65 4567789999999999999999999999999999986 46899999987654
|
Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily. |
| >TIGR00657 asp_kinases aspartate kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=191.47 Aligned_cols=197 Identities=17% Similarity=0.188 Sum_probs=147.3
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCc-------------------
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY------------------- 160 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~------------------- 160 (609)
++|+|+||+.+.+.. +.++++.|......|+++|+|||+++.+...|.++.....+..+.
T Consensus 2 ~~V~KFGGssv~~~~~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 81 (441)
T TIGR00657 2 LIVQKFGGTSVGNAERIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEILERLIP 81 (441)
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhh
Confidence 589999999998865 788888888777789999999999888888876665433322110
Q ss_pred --------cCCCHH--------HHHHHHHHHH-HHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecC
Q 007275 161 --------RITDSE--------SLAAAMEAAG-GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG 223 (609)
Q Consensus 161 --------rvt~~~--------~l~~~~~~~g-~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~ 223 (609)
+.++.. ..+. ..+.| .++..++.. .|+++|++ ++++++.+..+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~-ils~GE~~s~~l~~~--------~l~~~Gi~----a~~l~~~~~~l~t~~~-- 146 (441)
T TIGR00657 82 QAIAEELKRLLDAELVLEEKPREMDR-ILSFGERLSAALLSA--------ALEELGVK----AVSLLGGEAGILTDSN-- 146 (441)
T ss_pred HHHHHHHHHHHHHHHhhhcCcchHhh-eecHHHHHHHHHHHH--------HHHhCCCC----CEEEEcCcceEEecCC--
Confidence 000000 0011 12234 445544443 57899988 8999999887777543
Q ss_pred cccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-
Q 007275 224 VVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD- 298 (609)
Q Consensus 224 ~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~- 298 (609)
++....+..++.+.|+.+|+.|.|||+++. +.+..|++.++ ++|.+|+.+|.+|+||+|+++|||||++
T Consensus 147 ------~~~~~~~~~~~~~~l~~~l~~~~vpVv~G~~g~~~~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~ 220 (441)
T TIGR00657 147 ------FGRARVIIEILTERLEPLLEEGIIPVVAGFQGATEKGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYT 220 (441)
T ss_pred ------CCceeecHhhhHHHHHHHHhcCCEEEEeCcEeeCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCc
Confidence 332334667889999999999999999994 66778888876 7999999999999999999999999984
Q ss_pred ------CCCccccccCHHHHHHHHHh
Q 007275 299 ------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 299 ------~~~~lI~~it~~e~~~l~~~ 318 (609)
+++++|++++.+|+.++...
T Consensus 221 ~DP~~~~~a~~i~~is~~ea~el~~~ 246 (441)
T TIGR00657 221 TDPRIVPDARRIDEISYEEMLELASF 246 (441)
T ss_pred CCCCCCCCCeECCccCHHHHHHHHhc
Confidence 36899999999999988643
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis. |
| >PRK14556 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-17 Score=164.15 Aligned_cols=218 Identities=19% Similarity=0.184 Sum_probs=152.4
Q ss_pred CeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
|++|+||+|++|..++ +..++++|+.+.+.|+++.||.|||....-...+.+. | .+....|.+
T Consensus 16 ~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~~------~---~~r~~~D~~ 86 (249)
T PRK14556 16 KRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRGGRANFGN------K---IRRATADSM 86 (249)
T ss_pred CEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhccC------C---CchhhhhHH
Confidence 7899999999997542 6789999999999999999999999876532222110 1 234455666
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
-+++..+|..+.+. .|.+.|+++ .-++..... +.....+.+.+.+.|+.|
T Consensus 87 GmlaT~iNal~l~~--------~l~~~~~~~----~v~sa~~~~------------------~~~e~~~~~~~~~~l~~g 136 (249)
T PRK14556 87 GMIATMINALALRD--------MLISEGVDA----EVFSAKGVD------------------GLLKVASAHEFNQELAKG 136 (249)
T ss_pred HHHHHHHHHHHHHH--------HHHHcCCCe----EEeeccccC------------------cCCCCCCHHHHHHHHhCC
Confidence 66777888765544 467788762 222222110 011123566788899999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhh
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSE 324 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~ 324 (609)
.|||+.+.. | .-++++|.+|+++|..++||.|+++|||||++ |++++|++++..|.... +..
T Consensus 137 ~vvi~~gg~----G-~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~l~--- 205 (249)
T PRK14556 137 RVLIFAGGT----G-NPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---ELN--- 205 (249)
T ss_pred CEEEEECCC----C-CCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---chH---
Confidence 999976531 1 12566899999999999999999999999984 35788888876553221 000
Q ss_pred hHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHH
Q 007275 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (609)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl 404 (609)
- | ..
T Consensus 206 -----------------------------------------------------v---------------------m--d~ 209 (249)
T PRK14556 206 -----------------------------------------------------V---------------------M--DL 209 (249)
T ss_pred -----------------------------------------------------h---------------------H--HH
Confidence 0 2 24
Q ss_pred HHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 405 ~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.|+..+.++|++ ++|+|+..++. |..++.++..||.|.-
T Consensus 210 ~A~~~a~~~gIp-i~I~ng~~~~~-L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 210 GAFTQCRDFGIP-IYVFDLTQPNA-LVDAVLDSKYGTWVTL 248 (249)
T ss_pred HHHHHHHHCCCc-EEEECCCCchH-HHHHHcCCCCceEEEe
Confidence 577777899998 99999999985 5556677889999864
|
|
| >cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.4e-16 Score=161.68 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=129.9
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccc------c---c-----------CC
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK------Y---L-----------GR 159 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~------~---~-----------~g 159 (609)
++|.|+||+.+.+++ +.++++-|... ..+.++|+|.++-..+...|.++..... + . ..
T Consensus 1 ~~V~KFGGtSv~~~~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~~ 79 (298)
T cd04244 1 RLVMKFGGTSVGSAERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRHIKAAKE 79 (298)
T ss_pred CEEEEECcccCCCHHHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 479999999998754 66666666544 4578899999975445555433221100 0 0 00
Q ss_pred c---------------------------c---CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEE
Q 007275 160 Y---------------------------R---ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGV 209 (609)
Q Consensus 160 ~---------------------------r---vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l 209 (609)
+ . ..++...+.+......++..+.+. .|+++|++ +..+
T Consensus 80 l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~--------~L~~~Gi~----a~~l 147 (298)
T cd04244 80 AISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSA--------ALRSLGIK----ARAL 147 (298)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHH--------HHHhCCCC----eEEE
Confidence 0 0 000011111112222334444444 57899988 8888
Q ss_pred eecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCC
Q 007275 210 SVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEA 285 (609)
Q Consensus 210 ~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~A 285 (609)
++.+..+++....+ +. ....+....++. .+..+++.|.|||+++. +.+..|++.++ ++|.+|+.+|.+|+|
T Consensus 148 ~~~~~~i~t~~~~~--~a--~~~~~~~~~i~~-~l~~ll~~~~vpVv~Gfig~~~~g~~ttlgRggsD~~A~~~A~~l~a 222 (298)
T cd04244 148 DGGEAGIITDDNFG--NA--RPLPATYERVRK-RLLPMLEDGKIPVVTGFIGATEDGAITTLGRGGSDYSATIIGAALDA 222 (298)
T ss_pred cHHHcceeecCccc--cc--ccchhHHHHHHH-HHHHHhhcCCEEEEeCccccCCCCCEEEecCCChHHHHHHHHHHcCC
Confidence 88887666644321 00 000122223333 35578899999999994 77788998888 999999999999999
Q ss_pred CEEEEEecccccC---C----CCccccccCHHHHHHHHHh
Q 007275 286 DKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 286 d~LIiLTDvdgv~---~----~~~lI~~it~~e~~~l~~~ 318 (609)
+.|+++|||||++ | ++++|++++.+|+.++...
T Consensus 223 ~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~ 262 (298)
T cd04244 223 DEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYF 262 (298)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhC
Confidence 9999999999984 3 6899999999999998643
|
The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. |
| >PRK06291 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-15 Score=164.92 Aligned_cols=196 Identities=15% Similarity=0.145 Sum_probs=131.1
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccc-------c----------------
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-------Y---------------- 156 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~-------~---------------- 156 (609)
++|.|+||+.+.+.+ ++++++-|......|.++|+|.++-..+...|.++..... +
T Consensus 2 ~~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (465)
T PRK06291 2 RLVMKFGGTSVGDGERIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRERHYKAIE 81 (465)
T ss_pred cEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Confidence 479999999998855 6777776665555788899999875444444322210000 0
Q ss_pred --c------------------------CCc---cCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeE
Q 007275 157 --L------------------------GRY---RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207 (609)
Q Consensus 157 --~------------------------~g~---rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av 207 (609)
. .+. +-.++...+.+......++..+... .|+++|++ +.
T Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~--------~L~~~Gi~----a~ 149 (465)
T PRK06291 82 EAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSG--------ALRDLGIK----SV 149 (465)
T ss_pred HhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHH--------HHHhCCCC----eE
Confidence 0 000 0001122222222223344555444 47889988 88
Q ss_pred EEeecCCceeeeeecCcccCcCCcceeeEe---eeCHHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHH
Q 007275 208 GVSVASGNFLAAKRKGVVDGVDYGATGEVK---KVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACA 280 (609)
Q Consensus 208 ~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~---~v~~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA 280 (609)
.+++.+..+++.... +..+... ..-.+.++.+++.|.|||+++. +.+.+|++.++ ++|.+|+.+|
T Consensus 150 ~l~~~~~~i~t~~~~--------~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~~~g~~~tlgrggsD~~A~~~A 221 (465)
T PRK06291 150 ALTGGEAGIITDSNF--------GNARPLPKTYERVKERLEPLLKEGVIPVVTGFIGETEEGIITTLGRGGSDYSAAIIG 221 (465)
T ss_pred EEchHHCcEEecCCC--------CceeechhhHHHHHHHHHHHhhcCcEEEEeCcEEcCCCCCEEEecCCChHHHHHHHH
Confidence 888888777775432 2222110 0012468888999999999994 77788998888 9999999999
Q ss_pred HHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHH
Q 007275 281 LAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (609)
Q Consensus 281 ~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~ 316 (609)
.+|+||.|+++|||||++ |++++|++++.+|+.++.
T Consensus 222 ~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~ 264 (465)
T PRK06291 222 AALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELS 264 (465)
T ss_pred HhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHH
Confidence 999999999999999984 368999999999988875
|
|
| >PRK08373 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-14 Score=151.97 Aligned_cols=195 Identities=16% Similarity=0.127 Sum_probs=130.5
Q ss_pred cCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccc----------------------
Q 007275 98 RGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK---------------------- 155 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~---------------------- 155 (609)
.++++|.|+||+.+.+ .++++++-|... ..|.++|+|.++...+...|.++.....
T Consensus 2 ~~~m~V~KFGGsSv~~-~~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~~~L~~~~ 79 (341)
T PRK08373 2 VEKMIVVKFGGSSVRY-DFEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFAKRLGIDL 79 (341)
T ss_pred CCCCEEEEECCcchHh-HHHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccch
Confidence 4678999999999977 466666666533 4588999999986556555433311100
Q ss_pred -c--------cCCc-cCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcc
Q 007275 156 -Y--------LGRY-RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV 225 (609)
Q Consensus 156 -~--------~~g~-rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~ 225 (609)
. .+.. ...+...++.+.....+++..+.+. .|+++|++ +..+++.+- +.+ ..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~--------~L~~~Gi~----a~~l~~~~~-i~t-~~---- 141 (341)
T PRK08373 80 EILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAE--------ALENEGIK----GKVVDPWEI-LEA-KG---- 141 (341)
T ss_pred hhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH--------HHHHCCCc----eEEEeHHHh-eee-cC----
Confidence 0 0000 1112333455555555566666665 47899988 555554432 221 11
Q ss_pred cCcCCcceeeE----eeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC
Q 007275 226 DGVDYGATGEV----KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD 298 (609)
Q Consensus 226 ~~~d~g~~G~v----~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~ 298 (609)
+++. ..+ ...+.+.+..+|+.|.|||+++...+.+|.+.++ ++|.+|+.+|.+|+||.++|+|||||++
T Consensus 142 ---~~~~-a~i~~~~s~~~~~~l~~~l~~g~VpVv~Gf~g~~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVy 217 (341)
T PRK08373 142 ---SFGN-AFIDIKKSKRNVKILYELLERGRVPVVPGFIGNLNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIY 217 (341)
T ss_pred ---Cccc-eeechhhhhhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccC
Confidence 1111 111 2356688999999999999999755666776654 7999999999999999999999999984
Q ss_pred -------CCCccccccCHHHHHHHH
Q 007275 299 -------ESGHLIRFLTLQEADSLI 316 (609)
Q Consensus 299 -------~~~~lI~~it~~e~~~l~ 316 (609)
|++++|++++.+|+.++.
T Consensus 218 taDP~~v~~A~~i~~isy~Ea~ela 242 (341)
T PRK08373 218 TADPKLVPSARLIPYLSYDEALIAA 242 (341)
T ss_pred CCCCCCCCCCeEcccCCHHHHHHHH
Confidence 358899999999998764
|
|
| >COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=5e-14 Score=138.52 Aligned_cols=217 Identities=20% Similarity=0.178 Sum_probs=154.2
Q ss_pred cCCeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHc-CCcccccCCccCCCHHHH
Q 007275 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSER-GHEAKYLGRYRITDSESL 168 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~-g~~~~~~~g~rvt~~~~l 168 (609)
+-+++|+||||++|..++ +++++++|+.+.+.|.+|.||.|||....-..... |+ +....
T Consensus 4 ~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~g~-----------~r~~~ 72 (238)
T COG0528 4 KYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAAAGM-----------DRVTA 72 (238)
T ss_pred ceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHHcCC-----------chhhh
Confidence 347999999999997632 68899999999999999999999987665443322 22 44456
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 169 ~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
+..-+++..+|..+.+. .|.+.|++++ .++...-..+ ....+.....+.|
T Consensus 73 D~mGmlaTvmNal~L~~--------aL~~~~~~~~----v~sai~~~~~------------------~e~~~~~~A~~~l 122 (238)
T COG0528 73 DYMGMLATVMNALALQD--------ALERLGVDTR----VQSAIAMPQV------------------AEPYSRREAIRHL 122 (238)
T ss_pred hHHHHHHHHHHHHHHHH--------HHHhcCCcce----ecccccCccc------------------cCccCHHHHHHHH
Confidence 66666777788765554 4677888732 2222211110 1123455677788
Q ss_pred hCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEec-cccc-------CCCCccccccCHHHHHHHHHhhc
Q 007275 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPIL-------DESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTD-vdgv-------~~~~~lI~~it~~e~~~l~~~~~ 320 (609)
+.|-|||.++--..+ .-.+|++|++.|..++||.|+..|+ |||+ |||++.+++||.+|+.+....
T Consensus 123 ~~grVvIf~gGtg~P-----~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~-- 195 (238)
T COG0528 123 EKGRVVIFGGGTGNP-----GFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLK-- 195 (238)
T ss_pred HcCCEEEEeCCCCCC-----CCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcCe--
Confidence 999999998631111 2356999999999999999999995 9998 367999999999887665211
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
+ |
T Consensus 196 -----------------------------v-------------------------------------------------m 197 (238)
T COG0528 196 -----------------------------V-------------------------------------------------M 197 (238)
T ss_pred -----------------------------e-------------------------------------------------e
Confidence 0 2
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
- ..|...+-+++++ ++++|...+++ |..++.++..||.|.
T Consensus 198 D--~tA~~l~~~~~i~-i~Vfn~~~~~~-l~~~~~ge~~gT~V~ 237 (238)
T COG0528 198 D--PTAFSLARDNGIP-IIVFNINKPGN-LKRALKGEEVGTIVE 237 (238)
T ss_pred c--HHHHHHHHHcCCc-EEEEeCCCCcc-HHHHHcCCCCceEec
Confidence 1 3455666778887 99999999997 566667889999885
|
|
| >PRK07757 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-14 Score=133.81 Aligned_cols=129 Identities=33% Similarity=0.596 Sum_probs=110.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~Rgq 528 (609)
..||+++.+|++.+.++...........+.+.+.+..++..++++..+++++|++.+... ....++|..++|+|+|||+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~~-~~~~~~i~~v~V~p~~rg~ 80 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHIL-WEDLAEIRSLAVSEDYRGQ 80 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEec-cCCceEEEEEEECHHHcCC
Confidence 369999999999999998876655555566777777888888899999999999999843 3456789999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeecchhHhh
Q 007275 529 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERR 579 (609)
Q Consensus 529 GiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~lp~~~~ 579 (609)
|+|++||+.++++|++.|+..+.+.+ .+.+||+|+||+..+...+++..+
T Consensus 81 Glg~~Ll~~l~~~a~~~g~~~i~~~~-~~~~~Y~k~GF~~~~~~~~~~~~~ 130 (152)
T PRK07757 81 GIGRMLVEACLEEARELGVKRVFALT-YQPEFFEKLGFREVDKEALPQKVW 130 (152)
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEe-CcHHHHHHCCCEEcccccCChhHH
Confidence 99999999999999999999987766 467899999999999988886544
|
|
| >PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-14 Score=133.26 Aligned_cols=123 Identities=21% Similarity=0.302 Sum_probs=96.0
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecC----CCeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----EKCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~----~~~~eI~~ia 520 (609)
..||+++.+|++.+.+++.......+......+.+...+ ..+++++.++++||++.+...+. ...++|..++
T Consensus 4 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~ 83 (144)
T PRK10146 4 CELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELV 83 (144)
T ss_pred cEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheeheeE
Confidence 468999999999999998765543332211122333332 35778888999999999874221 2246799999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
|+|+|||+|+|+.||+.++++|++.|++.+.+.+ .++++||+++||+..+.
T Consensus 84 v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 84 VMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHF 138 (144)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhh
Confidence 9999999999999999999999999999999987 38999999999987643
|
|
| >COG0527 LysC Aspartokinases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-13 Score=149.19 Aligned_cols=199 Identities=15% Similarity=0.123 Sum_probs=139.3
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCC---------------------cccc--
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGH---------------------EAKY-- 156 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~---------------------~~~~-- 156 (609)
++|.|+||+.+.+.+ +.+.++-|+...+.|.+||+|.+++.-+...|-++-- ....
T Consensus 3 ~iV~KFGGTSva~~e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el~~~~~~ 82 (447)
T COG0527 3 LIVQKFGGTSVADAERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASELILDPFI 82 (447)
T ss_pred eEEEEeCCcccCCHHHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHHhhcchh
Confidence 799999999998755 7888888888777899999999987633333322211 0000
Q ss_pred cC-----------------CccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeee
Q 007275 157 LG-----------------RYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA 219 (609)
Q Consensus 157 ~~-----------------g~rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~a 219 (609)
.. -....++..++.+.....+++..|.+. .|+..|++ +..+++.+..+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~--------~L~~~Gv~----A~~~~~~~~~i~t~ 150 (447)
T COG0527 83 AARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAA--------ALNALGVD----ARSLDGRQAGIATD 150 (447)
T ss_pred hhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHH--------HHHhCCCc----eEEEchHHceeeec
Confidence 00 001124445555554455566666665 58899987 66665554444432
Q ss_pred eecCcccCcCCcceeeEeeeCHHH-HHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecc
Q 007275 220 KRKGVVDGVDYGATGEVKKVDVTR-MRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDG 294 (609)
Q Consensus 220 k~~~~~~~~d~g~~G~v~~v~~~~-I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDv 294 (609)
.. ++ ...+...+.+. +..+++.+.|||+++. +.+.+|++..+ -+|..|+.||.+|+||.+-|.|||
T Consensus 151 ~~--------~~-~a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDV 221 (447)
T COG0527 151 SN--------HG-NARILDEDSERRLLRLLEEGKVPVVAGFQGINEDGETTTLGRGGSDYSAAALAAALGADEVEIWTDV 221 (447)
T ss_pred Cc--------cc-ccccchhhhhhhHHHHhcCCcEEEecCceeecCCCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECC
Confidence 21 11 22233345556 8889999999999995 67778887754 489999999999999999999999
Q ss_pred cccC-------CCCccccccCHHHHHHHHHhhc
Q 007275 295 PILD-------ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 295 dgv~-------~~~~lI~~it~~e~~~l~~~~~ 320 (609)
||++ |++++|+.|+.+|+.+|..-|+
T Consensus 222 dGI~TaDPRiVp~Ar~i~~isyeEa~ELA~~GA 254 (447)
T COG0527 222 DGVYTADPRIVPDARLLPEISYEEALELAYLGA 254 (447)
T ss_pred CCCccCCCCCCCcceEcCccCHHHHHHHHHCCc
Confidence 9983 5799999999999999976543
|
|
| >PRK07922 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=132.39 Aligned_cols=124 Identities=28% Similarity=0.567 Sum_probs=100.6
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEE-ECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~-~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
.+.+|+++++|.+.+..+++...............+..+...+++++ .+++++|++.+...+ .+.++|..++|+|+||
T Consensus 5 ~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~~-~~~~~i~~l~V~p~~r 83 (169)
T PRK07922 5 AITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW-EDLAEIRTVAVDPAAR 83 (169)
T ss_pred CceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeecC-CCceEEEEEEECHHHh
Confidence 35799999999999999988765443333333444445556778887 899999999887543 4578899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeec
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~ 573 (609)
|+|+|++||++++++|++.|++++++.+. +.+||+|+||+..+...
T Consensus 84 gkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-~~~fY~k~GF~~~~~~~ 129 (169)
T PRK07922 84 GRGVGHAIVERLLDVARELGLSRVFVLTF-EVEFFARHGFVEIDGTP 129 (169)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCEEEEEec-cHHHHHHCCCEECcccc
Confidence 99999999999999999999999988764 57899999999986543
|
|
| >cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.3e-13 Score=137.86 Aligned_cols=201 Identities=18% Similarity=0.160 Sum_probs=119.5
Q ss_pred EEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcc---cc---------------------
Q 007275 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEA---KY--------------------- 156 (609)
Q Consensus 102 iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~---~~--------------------- 156 (609)
+|.|+||+.+.+.. ++++++-|..-.+.+.++|+|.++-..+...|.++-... ..
T Consensus 2 ~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~~~~L~~~ 81 (295)
T cd04259 2 VVLKFGGTSVSSRARWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNLAEQLEVD 81 (295)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHHHHHhhhh
Confidence 68999999998855 677777665433456778888886433433322111000 00
Q ss_pred ---------------cCCc---cCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceee
Q 007275 157 ---------------LGRY---RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLA 218 (609)
Q Consensus 157 ---------------~~g~---rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ 218 (609)
..+. ...++...+.+......+...+.+. .|++.|++ +..+.+.+ ++.
T Consensus 82 ~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~--------~L~~~Gi~----a~~ld~~~--~i~ 147 (295)
T cd04259 82 ADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAA--------YLEAQGLK----VKWLDARE--LLT 147 (295)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHH--------HHHhCCCC----eEEEcHHH--hee
Confidence 0000 0012222233333333445555554 47888987 44444332 121
Q ss_pred eee-cCcccCcCCcceeeE-eeeCHHHHHHHHhC-CCeEEEcCC-ccCCCCcEEE---ecHHHHHHHHHHHcCCCEEEEE
Q 007275 219 AKR-KGVVDGVDYGATGEV-KKVDVTRMRERLDG-GCLVILSNL-GYSSSGEVLN---CNTYEVATACALAIEADKLICI 291 (609)
Q Consensus 219 ak~-~~~~~~~d~g~~G~v-~~v~~~~I~~LL~~-G~IPVi~~~-~~~~~ge~~~---id~D~lAa~lA~~L~Ad~LIiL 291 (609)
... .+. ...+|+. ..+ .......|.+.+.. +.|||+.+. +.+..|++.. .++|.+|+.+|.+|+||.|+++
T Consensus 148 ~~~~~~~-~~~~~~~-a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~ 225 (295)
T cd04259 148 ATPTLGG-ETMNYLS-ARCESEYADALLQKRLADGAQLIITQGFIARNAHGETVLLGRGGSDTSAAYFAAKLQAARCEIW 225 (295)
T ss_pred ecccccc-ccccccc-ceehhhhhHHHHHHHHhcCCceeEeCCceeeCCCCCEEEECCCChHHHHHHHHHHcCCCEEEEE
Confidence 111 000 0001111 111 12234567766665 679999996 6777888775 4799999999999999999999
Q ss_pred ecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 292 IDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 292 TDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
|||||++ +++++|++++.+|+.++...
T Consensus 226 TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~~ 259 (295)
T cd04259 226 TDVPGLFTANPHEVPHARLLKRLDYDEAQEIATM 259 (295)
T ss_pred ECCCccccCCCCCCCCCeEeceeCHHHHHHHHHc
Confidence 9999984 36899999999999988643
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine. |
| >TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.4e-13 Score=141.76 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=66.2
Q ss_pred eeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCcccccc
Q 007275 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 307 (609)
Q Consensus 238 ~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~i 307 (609)
..+.+.+..+++.|.|||+++...+.+|...++ ++|.+|+.+|.+|+||.++++|||||++ +++++|+.+
T Consensus 144 ~~~~~~l~~~l~~g~IpVv~Gf~~~~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 144 KRNAKILYEVLESGKIPVIPGFYGNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 456778889999999999998755666766654 7999999999999999999999999984 357899999
Q ss_pred CHHHHHHH
Q 007275 308 TLQEADSL 315 (609)
Q Consensus 308 t~~e~~~l 315 (609)
+.+|+.++
T Consensus 224 sy~Ea~el 231 (327)
T TIGR02078 224 SYEEIKIA 231 (327)
T ss_pred CHHHHHHH
Confidence 99988755
|
This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between. |
| >PTZ00330 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.9e-13 Score=124.56 Aligned_cols=124 Identities=24% Similarity=0.356 Sum_probs=92.6
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc------CeEEEEEECCEEEEEEEEEEec-----CCCeEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----KEKCGEVA 517 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i------~~~~V~~~dg~IVG~~~l~~~~-----~~~~~eI~ 517 (609)
+.||+++++|++.+.++++..........-..+.+.... ..+++.+.++++||++.+...+ ....++|.
T Consensus 7 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~ 86 (147)
T PTZ00330 7 LELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIE 86 (147)
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEEE
Confidence 479999999999999998764332221111112222211 2345556789999999886322 11347899
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++||++++++|++.++..+.+.+ ..+.+||+++||+.++..
T Consensus 87 ~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~~~~~ 142 (147)
T PTZ00330 87 DVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRACERQ 142 (147)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEEeceE
Confidence 9999999999999999999999999999999998887 478999999999987644
|
|
| >cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=136.24 Aligned_cols=193 Identities=14% Similarity=0.119 Sum_probs=119.9
Q ss_pred EEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC-------------------Cc-
Q 007275 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG-------------------RY- 160 (609)
Q Consensus 102 iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~-------------------g~- 160 (609)
.|.|+||+.+.+.. +.++++-|.... .+.++|+|.++-..+...|.++.......+ .+
T Consensus 2 ~V~KFGGtSv~~~~~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~~l~ 80 (294)
T cd04257 2 KVLKFGGTSLANAERIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLDLITELL 80 (294)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhh
Confidence 59999999998754 677777665433 467888888875556555443321100000 00
Q ss_pred -----------------------------cCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEee
Q 007275 161 -----------------------------RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSV 211 (609)
Q Consensus 161 -----------------------------rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~ 211 (609)
+..++...+.+......+...+.+. .|++.|++ +..+++
T Consensus 81 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~--------~L~~~Gi~----a~~ld~ 148 (294)
T cd04257 81 SGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSA--------LLNQQGLD----AAWIDA 148 (294)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHH--------HHHhCCCC----eEEEch
Confidence 0000111111222222334444444 47888987 556555
Q ss_pred cCCceeeeeecCcccCcCCcceeeEe-eeCHHHHHHHHhC-CCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCC
Q 007275 212 ASGNFLAAKRKGVVDGVDYGATGEVK-KVDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEA 285 (609)
Q Consensus 212 ~d~~~l~ak~~~~~~~~d~g~~G~v~-~v~~~~I~~LL~~-G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~A 285 (609)
.+. +.+.. +++. ..+. ......++.++.. +.|||+.+. +.+..|++..+ .+|.+|+.+|..|+|
T Consensus 149 ~~~-i~t~~--------~~~~-a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~~G~~ttlGRGGSD~~A~~lA~~l~a 218 (294)
T cd04257 149 REL-IVTDG--------GYLN-AVVDIELSKERIKAWFSSNGKVIVVTGFIASNPQGETTTLGRNGSDYSAAILAALLDA 218 (294)
T ss_pred HHe-eEecC--------CCCc-eEechHhhHHHHHHHHhcCCCEEEecCcccCCCCCCEEECCCCchHHHHHHHHHHhCC
Confidence 441 22211 1221 1221 1224567777776 899999996 55667887654 489999999999999
Q ss_pred CEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 286 DKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 286 d~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
|.++++|||||++ |++++|+.++.+|+.++..
T Consensus 219 ~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~~ 257 (294)
T cd04257 219 DQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELSY 257 (294)
T ss_pred CEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHh
Confidence 9999999999983 4689999999999988854
|
These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act |
| >PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-13 Score=153.92 Aligned_cols=134 Identities=29% Similarity=0.566 Sum_probs=112.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~Rgq 528 (609)
.+||+++.+|++.+.+++..+.......+++.+.+......++++++++++|||+.+... +...++|..++|+|+||||
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~~~g~IVG~~~l~~~-~~~~~~I~~i~V~P~~rGk 542 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYIY-DSGLAEIRSLGVEAGWQVQ 542 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEEECCEEEEEEEEEEc-CCCeEEEEEEEECHHHcCC
Confidence 369999999999999998766544444556677777777788999999999999998743 3456899999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeecchhHhhhhccc
Q 007275 529 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINL 584 (609)
Q Consensus 529 GiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~lp~~~~~~y~~ 584 (609)
|+|++||++++++|++.|++.+++.+ .+..||+|+||+.++...+|......-+.
T Consensus 543 GIGk~Ll~~l~~~ak~~g~~~i~l~~-~a~~FYek~GF~~~~~~~~~~~~~~~~~~ 597 (614)
T PRK12308 543 GQGSALVQYLVEKARQMAIKKVFVLT-RVPEFFMKQGFSPTSKSLLPEKVLKDCDQ 597 (614)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEee-CcHHHHHHCCCEECCcccCChHHHHhhcc
Confidence 99999999999999999999998876 46799999999999999888666555543
|
|
| >PRK03624 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=118.16 Aligned_cols=120 Identities=18% Similarity=0.245 Sum_probs=93.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCH--HHHHhh----cCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD--EELLKA----LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~--e~l~~~----i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
..||+++.+|++.+.+++... +...++.. ..+... ...++++..++++||++.+.. ......+..++|+
T Consensus 3 ~~ir~~~~~d~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~--~~~~~~i~~i~v~ 77 (140)
T PRK03624 3 MEIRVFRQADFEAVIALWERC---DLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGY--DGHRGWAYYLAVH 77 (140)
T ss_pred eEEEEcccccHHHHHHHHHhc---CCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeec--cCCCceEEEEEEC
Confidence 569999999999999998765 22122211 112221 245778888899999998762 2344678889999
Q ss_pred ccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 523 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
|+|||+|+|++||+.+++++++.+++.+.+.+ .++.+||+|+||+..+...
T Consensus 78 p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~~~ 132 (140)
T PRK03624 78 PDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQDRIS 132 (140)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccEEe
Confidence 99999999999999999999999999998887 3789999999999876543
|
|
| >cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.1e-12 Score=132.18 Aligned_cols=78 Identities=19% Similarity=0.183 Sum_probs=66.7
Q ss_pred HHHHHHHHhC-CCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccC
Q 007275 241 VTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT 308 (609)
Q Consensus 241 ~~~I~~LL~~-G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it 308 (609)
.+.++.+++. +.|||+.+. +.+..|++..+ ++|.+|+.+|.+|+||.++++|||||++ +++++|+.++
T Consensus 168 ~~~~~~~~~~~~~v~Vv~Gfig~~~~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls 247 (293)
T cd04243 168 KERLAQLLAEHGKVVVTQGFIASNEDGETTTLGRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELS 247 (293)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCCCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeC
Confidence 3468888887 899999996 56677887765 5899999999999999999999999983 4689999999
Q ss_pred HHHHHHHHHh
Q 007275 309 LQEADSLIRQ 318 (609)
Q Consensus 309 ~~e~~~l~~~ 318 (609)
.+|+.++...
T Consensus 248 ~~ea~~l~~~ 257 (293)
T cd04243 248 YDEAMELAYF 257 (293)
T ss_pred HHHHHHHHhC
Confidence 9999988654
|
These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK- |
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-12 Score=132.93 Aligned_cols=123 Identities=20% Similarity=0.223 Sum_probs=98.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccC-CHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~-~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
..||+++++|++.+.++++..... +..++ ..+.+...+ ..+|+++.++++||++.+........++|..++|+|+
T Consensus 116 ~~IR~a~~~D~~~l~~L~~~v~~~-~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~ 194 (266)
T TIGR03827 116 FTLRIATEDDADAMAALYRKVFPT-YPFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFATLPE 194 (266)
T ss_pred eEEEECCHHHHHHHHHHHHHHhcc-CCCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECHH
Confidence 469999999999999998875432 22222 223233332 4578888899999999875444556789999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|||+|+|++||+.+++++++.|++.+++.+ .++..+|+|+||+.++..
T Consensus 195 yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l 246 (266)
T TIGR03827 195 YRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGTL 246 (266)
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccEE
Confidence 999999999999999999999999998877 367899999999998765
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.2e-13 Score=119.23 Aligned_cols=119 Identities=21% Similarity=0.370 Sum_probs=88.4
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh--cCeEEEEEECCEEEEEEEEEEec---CC---CeEEEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--LDSFYVVEREGQIIACAALFPFF---KE---KCGEVAAIGV 521 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~--i~~~~V~~~dg~IVG~~~l~~~~---~~---~~~eI~~iaV 521 (609)
+||+++++|++++.++++..........+........ ...++++++|++|||++.+.+.. .+ ..+.|..++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 4899999999999999877554433222111111111 25788999999999999998641 11 4578999999
Q ss_pred cccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEe
Q 007275 522 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 569 (609)
Q Consensus 522 ~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~ 569 (609)
+|+|||||+|++||+.+++++++.|+..+++.+ ...+||+++||+.+
T Consensus 81 ~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALLERARERGVPFIFLFP-SSPPFYRRFGFEYA 127 (127)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE--SSHHHHHHTTEEEE
T ss_pred CHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec-CChhhhhcCCCEEC
Confidence 999999999999999999999999999888866 46899999999864
|
... |
| >KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.4e-12 Score=116.14 Aligned_cols=125 Identities=22% Similarity=0.267 Sum_probs=101.6
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhh---ccCccCCHHHHHhhc------CeEEEEEE---CCEEEEEEEEEEecC----
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL------DSFYVVER---EGQIIACAALFPFFK---- 510 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~---~~~~~~~~e~l~~~i------~~~~V~~~---dg~IVG~~~l~~~~~---- 510 (609)
+.+.||+++++|.+.|.+|++++... ......+.+.+.... ..++++.. ++.++|++.+++...
T Consensus 2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~ 81 (163)
T KOG3216|consen 2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLG 81 (163)
T ss_pred CceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccc
Confidence 45689999999999999999885443 344555666666642 34555554 789999999986443
Q ss_pred CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
....+|.+++|.|+|||+|+|++|++.+-+.|.+.|+.++...+ .+|+.||++.|++....
T Consensus 82 k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 82 KQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred cceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 25679999999999999999999999999999999999999988 49999999999997654
|
|
| >PHA00673 acetyltransferase domain containing protein | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.5e-12 Score=118.84 Aligned_cols=121 Identities=22% Similarity=0.256 Sum_probs=92.0
Q ss_pred ccCCcCCHHHHHHHHhhhHhhcc----CccC-CH---HHHHhh-cCeEEEEEECCEEEEEEEEEEecC-----CCeEEEE
Q 007275 452 RTAKVTDLSGIKQIIQPLVESGA----LVRR-TD---EELLKA-LDSFYVVEREGQIIACAALFPFFK-----EKCGEVA 517 (609)
Q Consensus 452 R~a~~~D~~~I~~L~~~~~~~~~----~~~~-~~---e~l~~~-i~~~~V~~~dg~IVG~~~l~~~~~-----~~~~eI~ 517 (609)
--++.+|+|.|..|+.+...... ..+. .. +.+..+ ...++|++++|++|||+.+...+. ...+.|.
T Consensus 10 ~~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie 89 (154)
T PHA00673 10 AFAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTE 89 (154)
T ss_pred hhccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEE
Confidence 34889999999999877211111 1111 11 112222 256788888999999998875432 2456899
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH---HHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT---RTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~---~a~~fYek~GF~~~~~~ 572 (609)
.++|+|++||||||++||++++++|+++||..+++..+ ++.+||.++|+++....
T Consensus 90 ~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~~~~~~~ 147 (154)
T PHA00673 90 SIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAAGYRETNRT 147 (154)
T ss_pred EEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhCCchhhchh
Confidence 99999999999999999999999999999999999985 67999999999987554
|
|
| >cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.6e-11 Score=123.24 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=85.0
Q ss_pred hhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe--
Q 007275 194 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 270 (609)
Q Consensus 194 ~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i-- 270 (609)
.|++.|++ +..++..+-.+++... ++. ..+.....+.+.++++.+.|||+.+. +.+..|++..+
T Consensus 130 ~L~~~Gi~----a~~ld~~~~~i~t~~~--------~~~-a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~G~~ttLgR 196 (288)
T cd04245 130 YLNYQGID----ARYVIPKDAGLVVTDE--------PGN-AQILPESYQKIKKLRDSDEKLVIPGFYGYSKNGDIKTFSR 196 (288)
T ss_pred HHHHCCCC----eEEEcHHHCceeecCC--------ccc-cccchhhHHHHHHHHhCCCEEEEeCccccCCCCCEEEcCC
Confidence 47888987 5555544433333221 111 12223356788888899999999986 67788999888
Q ss_pred -cHHHHHHHHHHHcCCCEEEEEeccccc---C----CCCccccccCHHHHHHHHHh
Q 007275 271 -NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 271 -d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~----~~~~lI~~it~~e~~~l~~~ 318 (609)
.+|..|+.+|.+|+||.+.+.|||||+ | |+++.|++++.+|+.++...
T Consensus 197 ggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~ela~~ 252 (288)
T cd04245 197 GGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYREMRELSYA 252 (288)
T ss_pred CchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHHHHHHHHC
Confidence 899999999999999999999999998 3 57899999999999998644
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine. |
| >PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.9e-12 Score=110.72 Aligned_cols=103 Identities=31% Similarity=0.501 Sum_probs=81.1
Q ss_pred CHHHHHHHHhhhHhhccC-c--------cCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 458 DLSGIKQIIQPLVESGAL-V--------RRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 458 D~~~I~~L~~~~~~~~~~-~--------~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
|+++|.++++........ . ..+.+.+.+.+ ..+||++++++++||+.+. ...+|..++|+|+
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~-----~~~~i~~l~v~p~ 75 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE-----PDGEISHLYVLPE 75 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE-----TCEEEEEEEE-GG
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc-----CCCeEEEEEEChh
Confidence 788888888875554321 1 13455555554 3689999999999999986 2345999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCC
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 566 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF 566 (609)
|||+|+|++|++.++++++. +++.+.+.. ..+.+||+++||
T Consensus 76 ~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 76 YRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp GTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred hcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 99999999999999999977 999988887 478999999998
|
|
| >PRK10140 putative acetyltransferase YhhY; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=116.33 Aligned_cols=123 Identities=16% Similarity=0.167 Sum_probs=93.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc---cCccCCHHHHHhhc-----CeEEEEEECCEEEEEEEEEEecC---CCeEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFK---EKCGEVA 517 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~---~~~~~~~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~~~---~~~~eI~ 517 (609)
+.||+++.+|++.+.++..+..... .....+.+.+...+ ..+++++.++++||++++..... ...+++
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~- 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF- 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE-
Confidence 4699999999999999987532111 11223344444433 24577788999999999974322 223455
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++||+.+++++++ .++.++.+.+ .++.+||+++||+..+..
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 142 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTG 142 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeec
Confidence 599999999999999999999999988 6999988877 488999999999998764
|
|
| >TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.4e-12 Score=122.83 Aligned_cols=126 Identities=18% Similarity=0.202 Sum_probs=94.8
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHh-hccCccCC-HH----HHHh----hc----Ce--EEEEEECCEEEEEEEEEEec
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRT-DE----ELLK----AL----DS--FYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~-~e----~l~~----~i----~~--~~V~~~dg~IVG~~~l~~~~ 509 (609)
++...||+++.+|.+.+.++++.... ..+..++. .+ .+.. +. .. +++.+.++++||++.+....
T Consensus 41 ~~~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~ 120 (191)
T TIGR02382 41 TSDPGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELN 120 (191)
T ss_pred CCCCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecC
Confidence 33457999999999999999887632 22222221 11 1111 11 11 23445688999999987543
Q ss_pred CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 ~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...++|..++|+|+|||+|+|++|++.++++|+++|+.+|.+.+ ..+.+||+|+||+..+..
T Consensus 121 -~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~ 186 (191)
T TIGR02382 121 -DTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIESTA 186 (191)
T ss_pred -CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccccce
Confidence 34678999999999999999999999999999999999999987 378999999999987654
|
This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583). |
| >PLN02706 glucosamine 6-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.7e-12 Score=117.63 Aligned_cols=121 Identities=25% Similarity=0.392 Sum_probs=90.7
Q ss_pred cccccCCcCCHH-HHHHHHhhhHhhccCccCCHHHHHhhc---------CeEEEEEE--CCEEEEEEEEEEec-----CC
Q 007275 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (609)
Q Consensus 449 ~~IR~a~~~D~~-~I~~L~~~~~~~~~~~~~~~e~l~~~i---------~~~~V~~~--dg~IVG~~~l~~~~-----~~ 511 (609)
..||+++.+|++ .+..++.+.... .+++.+.+...+ ..+++++. ++++||++.+.... ..
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 83 (150)
T PLN02706 7 FKVRRLEISDKSKGFLELLQQLTVV---GDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCG 83 (150)
T ss_pred eEEeEhhhcccchHHHHHHHhccCC---CCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCC
Confidence 469999999998 588887654322 245544444332 12455555 68999999875221 12
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||||+|+.||+.++++|+++|++++.+.+. ...+||+|+||+..+..
T Consensus 84 ~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~g~~ 145 (150)
T PLN02706 84 KVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVRKEIQ 145 (150)
T ss_pred cEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEEehhh
Confidence 45678889999999999999999999999999999999999883 45689999999987643
|
|
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.7e-12 Score=104.24 Aligned_cols=75 Identities=32% Similarity=0.524 Sum_probs=68.9
Q ss_pred EEECCEEEEEEEEEEecCC----CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHC
Q 007275 493 VEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSR 564 (609)
Q Consensus 493 ~~~dg~IVG~~~l~~~~~~----~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~ 564 (609)
+++||++||++.+.+.... ...+|..++|+|+|||+|+|+.|++.++++|++.|++.+++.+ ..+.+||+++
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc
Confidence 4789999999999876654 6899999999999999999999999999999999999999998 3689999999
Q ss_pred CCe
Q 007275 565 GFR 567 (609)
Q Consensus 565 GF~ 567 (609)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
|
3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A .... |
| >PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.6e-12 Score=117.15 Aligned_cols=126 Identities=25% Similarity=0.292 Sum_probs=95.7
Q ss_pred cccCC-cCCHHHHHHHHhhhHhhccC-ccCC---HHHHHhhc-----CeEEEEEECCEEEEEEEEEEe-----cCCCeEE
Q 007275 451 TRTAK-VTDLSGIKQIIQPLVESGAL-VRRT---DEELLKAL-----DSFYVVEREGQIIACAALFPF-----FKEKCGE 515 (609)
Q Consensus 451 IR~a~-~~D~~~I~~L~~~~~~~~~~-~~~~---~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~-----~~~~~~e 515 (609)
||+++ .+|++.|.+|+++.....+. ..++ .+.+.+.+ ...+|++.||+++|++.+... ..+....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 68999 99999999999876544332 2233 22333333 357899999999999988641 1345677
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecchh
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPE 576 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~ 576 (609)
++.++++|+|||+|+|+.+++.+++++.+. ++.++.+.+ .+++++|+|.||+.++...+|.
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~~~~ 146 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFEFPD 146 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEEESS
T ss_pred EeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEECCC
Confidence 989999999999999999999999999876 899999988 4899999999999999998774
|
|
| >PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-11 Score=113.87 Aligned_cols=118 Identities=20% Similarity=0.278 Sum_probs=92.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc-Ce--EEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DS--FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i-~~--~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~ 525 (609)
.+||+++.+|++.+.++.... ...+|..+.+.... .. .+++..++++||++.+.... ...++..++|+|+|
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~--~~~~~~~i~v~~~~ 75 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRA----HAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVL--DEATLFNIAVDPDY 75 (146)
T ss_pred cchhcCChhhhHHHHHHHHhc----CCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeec--CceEEEEEEECHHH
Confidence 369999999999999986432 22345555544332 12 23456789999999887433 34668889999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
||+|+|+.|++.+++.+++.+++.+++.+ .++.+||+|+||+..+..
T Consensus 76 rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~~ 126 (146)
T PRK09491 76 QRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTIR 126 (146)
T ss_pred ccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEeeee
Confidence 99999999999999999999999999887 478999999999987654
|
|
| >PRK09831 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-11 Score=115.82 Aligned_cols=113 Identities=17% Similarity=0.194 Sum_probs=86.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH-----------hhc--CeEEEEEECCEEEEEEEEEEecCCCeEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-----------KAL--DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~-----------~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI 516 (609)
.||+++.+|.+.+.+++.+..........+.+.+. ..+ ..++++..+++++|++.+.. .++
T Consensus 2 ~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~~------~~i 75 (147)
T PRK09831 2 QIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIE------HYI 75 (147)
T ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEehh------cee
Confidence 58999999999999998875444332222222222 111 35788888999999988752 467
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeec
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~ 573 (609)
..++|+|+|||+|+|++||+.+++.+++ +.+.+ .++.+||+++||+.++...
T Consensus 76 ~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 76 DMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERYGFQTVKQQR 128 (147)
T ss_pred eeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHCCCEEeeccc
Confidence 8899999999999999999999999876 23333 5789999999999998754
|
|
| >PRK10975 TDP-fucosamine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2e-11 Score=119.56 Aligned_cols=124 Identities=19% Similarity=0.235 Sum_probs=94.6
Q ss_pred ccccccCCcCCHHHHHHHHhhhHh-hccCccC-CH----HHHHhhc---------CeEEEEE-ECCEEEEEEEEEEecCC
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVE-SGALVRR-TD----EELLKAL---------DSFYVVE-REGQIIACAALFPFFKE 511 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~-~~----e~l~~~i---------~~~~V~~-~dg~IVG~~~l~~~~~~ 511 (609)
...||+++++|++.+.++.++... ..+..+| +. +.+..++ ..++++. .++++||++.+... ..
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~-~~ 124 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLREL-ND 124 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEec-CC
Confidence 467999999999999999887533 2232222 11 1122221 1344444 46889999998743 34
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...+|..++|+|+|||||+|++|++.+++++++.|++++.+.+ .++.+||+|+||+..+..
T Consensus 125 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~ 189 (194)
T PRK10975 125 TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIESTA 189 (194)
T ss_pred CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeEEE
Confidence 5688999999999999999999999999999999999999887 378999999999998765
|
|
| >PRK09084 aspartate kinase III; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.3e-11 Score=133.97 Aligned_cols=192 Identities=14% Similarity=0.118 Sum_probs=119.5
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccc-----------------------
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY----------------------- 156 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~----------------------- 156 (609)
++|.|+||+.+.+.+ ++++++-|. +.+.++|+|.++-..+...|.++-.....
T Consensus 1 m~V~KFGGtSv~~~e~i~~v~~ii~---~~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~l~ 77 (448)
T PRK09084 1 LVVAKFGGTSVADFDAMNRSADIVL---SNPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYAILDRLG 77 (448)
T ss_pred CEEEEECccCcCCHHHHHHHHHHHh---cCCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHhc
Confidence 479999999998854 556655543 25788899988855555544332100000
Q ss_pred -------------------cCCcc-CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCce
Q 007275 157 -------------------LGRYR-ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNF 216 (609)
Q Consensus 157 -------------------~~g~r-vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~ 216 (609)
..+.. ..++...+.+......+...+.+. .|++.|++ +..+++.+- +
T Consensus 78 ~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~--------~L~~~Gi~----a~~l~~~~~-i 144 (448)
T PRK09084 78 DPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVE--------LLRERGVQ----AEWFDVRKV-M 144 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHH--------HHHhCCCC----cEEEchHHe-E
Confidence 00000 011122222222233344555544 57889987 555544332 2
Q ss_pred eeeeecCcccCcCCcceeeE-----eeeCHHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCE
Q 007275 217 LAAKRKGVVDGVDYGATGEV-----KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADK 287 (609)
Q Consensus 217 l~ak~~~~~~~~d~g~~G~v-----~~v~~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~ 287 (609)
++.. +|+. .++ .......+..+++.+ |||+.+. +.+..|++..+ .+|..|+.+|..|+||.
T Consensus 145 ~t~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~~G~~ttLgRggSD~~a~~~a~~l~a~~ 214 (448)
T PRK09084 145 RTDD--------RFGR-AEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDEKGRTTTLGRGGSDYSAALLAEALNASR 214 (448)
T ss_pred EecC--------CCCc-ccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCCCCCEeecCCCchHHHHHHHHHHcCCCE
Confidence 2211 1111 111 111224566677888 9999985 66788887765 89999999999999999
Q ss_pred EEEEecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 288 LICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 288 LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
+++.|||||++ |++++|+.++.+|+.++...
T Consensus 215 ~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~ela~~ 252 (448)
T PRK09084 215 VEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAEMATF 252 (448)
T ss_pred EEEEECCCccccCCCCCCCCCeEcccCCHHHHHHHHhC
Confidence 99999999983 56899999999999988643
|
|
| >PRK05925 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-11 Score=131.76 Aligned_cols=73 Identities=21% Similarity=0.177 Sum_probs=62.3
Q ss_pred HHHhCCCeEEEcCC-ccCCCCcEE---EecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHH
Q 007275 246 ERLDGGCLVILSNL-GYSSSGEVL---NCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADS 314 (609)
Q Consensus 246 ~LL~~G~IPVi~~~-~~~~~ge~~---~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~ 314 (609)
..++.+.|||+.+. +.+.+|++. .+++|.+|+.+|.+|+||.++++|||||++ +++++|++++.+|+.+
T Consensus 160 ~~~~~~~v~Vv~GF~g~~~~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~~A~~i~~is~~ea~e 239 (440)
T PRK05925 160 LALQEDAIYIMQGFIGANSSGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIKDAQLIPELSFEEMQN 239 (440)
T ss_pred hhccCCcEEEecCcceeCCCCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCCCCeEeeEECHHHHHH
Confidence 35667789999996 777888876 468999999999999999999999999983 4689999999999888
Q ss_pred HHHh
Q 007275 315 LIRQ 318 (609)
Q Consensus 315 l~~~ 318 (609)
+...
T Consensus 240 la~~ 243 (440)
T PRK05925 240 LASF 243 (440)
T ss_pred HHhC
Confidence 7543
|
|
| >TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.9e-11 Score=115.88 Aligned_cols=119 Identities=19% Similarity=0.209 Sum_probs=88.5
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc-CeEEEEE-ECCEEEEEEEEEEec-CCCeEEEEEEEEcccCcC
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVE-REGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 527 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i-~~~~V~~-~dg~IVG~~~l~~~~-~~~~~eI~~iaV~p~~Rg 527 (609)
||+++.+|++.|.+++..................... ..+++++ .++++||++.+.... .....++..++|+|+|||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 6899999999999998764322111111111111212 3466666 467999998765332 335678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEe
Q 007275 528 QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 569 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~ 569 (609)
||+|++|++.++++++..++.++.+.+ ..+++||+|+||+..
T Consensus 81 ~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~ 126 (157)
T TIGR02406 81 KGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRG 126 (157)
T ss_pred CcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccC
Confidence 999999999999999999999999887 378999999999763
|
This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. |
| >PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-11 Score=143.26 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=65.6
Q ss_pred CHHHHHHHHhCC-CeEEEcCC-ccCCCCcEEE---ecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCcccccc
Q 007275 240 DVTRMRERLDGG-CLVILSNL-GYSSSGEVLN---CNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 307 (609)
Q Consensus 240 ~~~~I~~LL~~G-~IPVi~~~-~~~~~ge~~~---id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~i 307 (609)
+...++.+++.+ .|||+.+. +.+..|++.. +++|.+|+.+|.+|+||+|+++|||||++ +++++|+++
T Consensus 178 ~~~~~~~~~~~~~~v~Vv~Gf~g~~~~g~~ttLgrggsD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~l 257 (861)
T PRK08961 178 DPALRERFAAQPAQVLITQGFIARNADGGTALLGRGGSDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTRL 257 (861)
T ss_pred HHHHHHHHhccCCeEEEeCCcceeCCCCCEEEEeCCchHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEeccc
Confidence 455677777766 49999986 6677788664 58999999999999999999999999984 367899999
Q ss_pred CHHHHHHHHHh
Q 007275 308 TLQEADSLIRQ 318 (609)
Q Consensus 308 t~~e~~~l~~~ 318 (609)
+.+|+.++...
T Consensus 258 s~~e~~el~~~ 268 (861)
T PRK08961 258 DYDEAQEIATT 268 (861)
T ss_pred CHHHHHHHHHC
Confidence 99999988643
|
|
| >PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.8e-11 Score=110.60 Aligned_cols=121 Identities=26% Similarity=0.422 Sum_probs=91.2
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCcc----CCHHHHHhhc--------CeEEEEEE-CCEEEEEEEEEEecC-CCeEEE
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVR----RTDEELLKAL--------DSFYVVER-EGQIIACAALFPFFK-EKCGEV 516 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~----~~~e~l~~~i--------~~~~V~~~-dg~IVG~~~l~~~~~-~~~~eI 516 (609)
||+++++|++.|..+++......+... .+.+.+..++ ..++++.+ +|++||++.+.+... ...+++
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 699999999999999977443333211 2333333322 44666665 999999999986543 355666
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A-~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|.|+||++|+|+.|++.++++| ++.|++++++.+ .++..||+++||+..+..
T Consensus 81 -~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~ 140 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEEGEL 140 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEEE
T ss_pred -eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEEEEE
Confidence 4888899999999999999999999 899999999987 489999999999998865
|
... |
| >COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.6e-11 Score=113.60 Aligned_cols=144 Identities=27% Similarity=0.302 Sum_probs=111.1
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccC----ccCCHHHHHhhc-------CeEEEEEEC-CEEEEEEEEEEecCC----Ce
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVERE-GQIIACAALFPFFKE----KC 513 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~i-------~~~~V~~~d-g~IVG~~~l~~~~~~----~~ 513 (609)
.||+++.+|++.|..+++.....+.. .+.+.+.+.+|. ..++|++.+ |+++|++.+.++... ..
T Consensus 3 ~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~t 82 (169)
T COG1247 3 EIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRHT 82 (169)
T ss_pred EEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccceE
Confidence 58999999999999999997776543 456777777665 156777655 999999999876442 23
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
.+. .++|+|++||+|+|++||+.+++.|+++|++.+.... ..+.++++++||+.++.......+...| -+.
T Consensus 83 ve~-SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~vg~k~g~w----ld~ 157 (169)
T COG1247 83 VEL-SIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGFEEVGTFPEVGDKFGRW----LDL 157 (169)
T ss_pred EEE-EEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCCEEeccccccccccceE----Eee
Confidence 344 9999999999999999999999999999998877665 3789999999999998775443332222 256
Q ss_pred eEEeecCCC
Q 007275 590 YYMKKLLPD 598 (609)
Q Consensus 590 i~mkkll~~ 598 (609)
++|.+.|..
T Consensus 158 ~~~~~~l~~ 166 (169)
T COG1247 158 VLMQLLLEE 166 (169)
T ss_pred eeeehhhcc
Confidence 777776654
|
|
| >TIGR01575 rimI ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.4e-11 Score=106.25 Aligned_cols=109 Identities=24% Similarity=0.379 Sum_probs=85.4
Q ss_pred CHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHH
Q 007275 458 DLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533 (609)
Q Consensus 458 D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~ 533 (609)
|++.+.++.... +..+++.+.+...+ ..+++..+++++||++.+... ....++..++|+|+|||||+|++
T Consensus 1 d~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~i~~~~v~~~~rg~G~g~~ 74 (131)
T TIGR01575 1 DLKAVLEIEAAA----FAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIV--LDEAHILNIAVKPEYQGQGIGRA 74 (131)
T ss_pred CHHHHHHHHHhh----CCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEec--CCCeEEEEEEECHHHcCCCHHHH
Confidence 566777774433 33356666666554 345666778999999997732 34567889999999999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 534 LLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 534 LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|++++++++.+.+++.+++.+ .++.+||+++||+..+..
T Consensus 75 ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~ 117 (131)
T TIGR01575 75 LLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIR 117 (131)
T ss_pred HHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCccccc
Confidence 999999999999999999876 368899999999987654
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. |
| >cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-10 Score=117.93 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=60.7
Q ss_pred hCCCeEEEcCC-ccCCCCcEEE---ecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 249 DGGCLVILSNL-GYSSSGEVLN---CNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 249 ~~G~IPVi~~~-~~~~~ge~~~---id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
..+.|||+.+. +.+..|++.. .++|..|+.+|..|+|+.++++|||||++ +++++|+.++.+|+.++..
T Consensus 176 ~~~~v~Vv~Gf~g~~~~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~ 255 (292)
T cd04258 176 LAGTVVVTQGFIGSTEKGRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMAT 255 (292)
T ss_pred hcCCEEEECCccccCCCCCEEecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHH
Confidence 45689999986 6667788774 57999999999999999999999999983 4589999999999999865
Q ss_pred hh
Q 007275 318 QR 319 (609)
Q Consensus 318 ~~ 319 (609)
.|
T Consensus 256 ~G 257 (292)
T cd04258 256 FG 257 (292)
T ss_pred CC
Confidence 43
|
AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. |
| >PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.5e-11 Score=98.62 Aligned_cols=75 Identities=37% Similarity=0.749 Sum_probs=64.2
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCe
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFR 567 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~ 567 (609)
.++++++|++++||+.+.+ .++..+|..++|+|+|||+|+|++||+++++.++. +.+++.+ ..+.+||+++||+
T Consensus 4 ~~~~~~~~~~ivG~~~~~~--~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~~GF~ 78 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWP--NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEKLGFE 78 (79)
T ss_dssp EEEEEEETTEEEEEEEEEE--TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHHTTEE
T ss_pred EEEEEEECCEEEEEEEEEE--cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHHCcCC
Confidence 5788999999999999974 34588999999999999999999999999888843 4577776 5789999999998
Q ss_pred E
Q 007275 568 E 568 (609)
Q Consensus 568 ~ 568 (609)
+
T Consensus 79 ~ 79 (79)
T PF13508_consen 79 E 79 (79)
T ss_dssp E
T ss_pred C
Confidence 5
|
... |
| >PRK10314 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.9e-11 Score=114.23 Aligned_cols=122 Identities=13% Similarity=0.116 Sum_probs=86.5
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHh--hcCeEEEEEECCEEEEEEEEEEecCC-CeEEEEEEEEcccCcC
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK--ALDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPECRG 527 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~--~i~~~~V~~~dg~IVG~~~l~~~~~~-~~~eI~~iaV~p~~Rg 527 (609)
+..++.+++.++..+.....-.....+...-+-.+ .....+++..+++++|++.+.+..+. ...+|.+++|+|+|||
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~~e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG 88 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRG 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCccccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhC
Confidence 34566666777777776643322222211101111 11234556678999999999854322 3579999999999999
Q ss_pred CcHHHHHHHHHHHHHHHC-CCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 528 QGQGDKLLDYIEKKAASL-GLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~-G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
+|+|++||+.+++++++. +...+++.+. .+.+||+++||+.++..
T Consensus 89 ~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~~ 135 (153)
T PRK10314 89 EKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEV 135 (153)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCCc
Confidence 999999999999999874 7788888874 67899999999988754
|
|
| >KOG3139 consensus N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.6e-11 Score=110.16 Aligned_cols=99 Identities=21% Similarity=0.233 Sum_probs=76.7
Q ss_pred eEEEEEECCE--EEEEEEEEEecC--CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHH
Q 007275 489 SFYVVEREGQ--IIACAALFPFFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADW 560 (609)
Q Consensus 489 ~~~V~~~dg~--IVG~~~l~~~~~--~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~f 560 (609)
+++++..|++ .||++.+..... ...++|.+++|+++|||||||++|.+.+++.++.+|+..+.|.| ..|.++
T Consensus 56 ~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~L 135 (165)
T KOG3139|consen 56 CFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRL 135 (165)
T ss_pred eEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHH
Confidence 3444444433 598887763222 24699999999999999999999999999999999999999999 379999
Q ss_pred HHHCCCeEeeeecchhHhhhhcccCCCceeEEee
Q 007275 561 FKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 594 (609)
Q Consensus 561 Yek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkk 594 (609)
|+++||+...... .|..++-+.+.|+-
T Consensus 136 Y~sLGF~r~~r~~-------~YYlng~dA~rl~L 162 (165)
T KOG3139|consen 136 YESLGFKRDKRLF-------RYYLNGMDALRLKL 162 (165)
T ss_pred HHhcCceEeccee-------EEEECCcceEEEEe
Confidence 9999999876552 45555556666553
|
|
| >PRK09034 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.7e-10 Score=122.75 Aligned_cols=123 Identities=13% Similarity=0.163 Sum_probs=88.5
Q ss_pred HHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEE
Q 007275 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (609)
Q Consensus 176 g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPV 255 (609)
..++..+.+. .|++.|++ +..+++.+-.+++.. +++.. .+.....+.+..++..+.|||
T Consensus 120 E~~S~~l~a~--------~L~~~g~~----a~~~~~~~~~~~t~~--------~~~~a-~i~~~~~~~~~~~~~~~~v~V 178 (454)
T PRK09034 120 EDLNAKLIAA--------YLNYEGIP----ARYVDPKEAGIIVTD--------EPGNA-QVLPESYDNLKKLRDRDEKLV 178 (454)
T ss_pred HHHHHHHHHH--------HHHhCCCC----cEEEchHHceEEecC--------CcCce-eEcHhhHHHHHHHHhcCCEEE
Confidence 3445555554 47888987 555544443333211 12211 223335667777777888999
Q ss_pred EcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEeccccc---C----CCCccccccCHHHHHHHHHhh
Q 007275 256 LSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (609)
Q Consensus 256 i~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~----~~~~lI~~it~~e~~~l~~~~ 319 (609)
+.+. +.+..|++..+ .+|..|+.+|.+|+||.+.+.|||||+ | |+++.|+.++.+|+.+|...|
T Consensus 179 v~GFig~~~~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~ela~~G 253 (454)
T PRK09034 179 IPGFFGVTKDGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREMRELSYAG 253 (454)
T ss_pred ecCccccCCCCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHHHHHHhCC
Confidence 9996 66788887765 589999999999999999999999998 3 578999999999999986543
|
|
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-10 Score=134.60 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=63.5
Q ss_pred HHHHHHH-hCCCeEEEcCC-ccCCCCcEEEec---HHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCH
Q 007275 242 TRMRERL-DGGCLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL 309 (609)
Q Consensus 242 ~~I~~LL-~~G~IPVi~~~-~~~~~ge~~~id---~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~ 309 (609)
..|++++ +.+.|||+.+. +.+..|++..+. +|.+|+.+|..|+||.++++|||||++ |++++|++++.
T Consensus 172 ~~i~~~~~~~~~v~Vv~Gfig~~~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy 251 (819)
T PRK09436 172 RRIAASFIPADHVILMPGFTAGNEKGELVTLGRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSY 251 (819)
T ss_pred HHHHHHHhcCCcEEEecCcccCCCCCCEEEeCCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecH
Confidence 4555544 56889999996 666778887665 899999999999999999999999983 56899999999
Q ss_pred HHHHHHHH
Q 007275 310 QEADSLIR 317 (609)
Q Consensus 310 ~e~~~l~~ 317 (609)
+|+.++..
T Consensus 252 ~ea~el~~ 259 (819)
T PRK09436 252 QEAMELSY 259 (819)
T ss_pred HHHHHHHh
Confidence 99988853
|
|
| >cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.7e-10 Score=115.57 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=59.8
Q ss_pred CCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEeccccc---C----CCCccccccCHHHHHHHHHh
Q 007275 250 GGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 250 ~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~----~~~~lI~~it~~e~~~l~~~ 318 (609)
.+.|||+.+. +.+..|++..+ .+|..|+.+|..|+|+.++++|||||+ | +++++|++|+.+|+.++...
T Consensus 189 ~~~v~Vv~GFig~~~~G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~ 268 (306)
T cd04247 189 ENRVPVVTGFFGNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYY 268 (306)
T ss_pred CCceEEeeccEecCCCCCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhC
Confidence 5789999996 66677887765 589999999999999999999999998 3 45899999999999998654
Q ss_pred h
Q 007275 319 R 319 (609)
Q Consensus 319 ~ 319 (609)
+
T Consensus 269 G 269 (306)
T cd04247 269 G 269 (306)
T ss_pred c
Confidence 3
|
Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. |
| >PRK10514 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-10 Score=106.53 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=82.0
Q ss_pred cccccCCcCCHHHHHHHHhhhHh--hccCccCCHHHHHhhc------CeEEEE-EECCEEEEEEEEEEecCCCeEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE--SGALVRRTDEELLKAL------DSFYVV-EREGQIIACAALFPFFKEKCGEVAAI 519 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~--~~~~~~~~~e~l~~~i------~~~~V~-~~dg~IVG~~~l~~~~~~~~~eI~~i 519 (609)
..||+++++|.+.+.+++.+... ..+..+.+.+.+..++ ..++++ ..++++||++.+.+ .++..+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~------~~~~~~ 75 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG------GHMEAL 75 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec------CcEeEE
Confidence 46899999999999999876332 1222233333333322 223444 46899999998752 246689
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
+|+|+|||+|+|++||+++++.+. ++.+.+ .++.+||+|+||+..+...
T Consensus 76 ~v~p~~rgkGig~~Ll~~~~~~~~-----~i~~~v~~~N~~a~~~yek~Gf~~~~~~~ 128 (145)
T PRK10514 76 FVDPDVRGCGVGRMLVEHALSLHP-----ELTTDVNEQNEQAVGFYKKMGFKVTGRSE 128 (145)
T ss_pred EECHHhccCCHHHHHHHHHHHhcc-----ccEEEeecCCHHHHHHHHHCCCEEecccc
Confidence 999999999999999999998753 333433 4899999999999987654
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.9e-10 Score=120.19 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=96.9
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhcc-CccCCHHHHHhhcC--eEEEEEE-----CCEEEEEEEEEEecCCCeEEEE
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALD--SFYVVER-----EGQIIACAALFPFFKEKCGEVA 517 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~i~--~~~V~~~-----dg~IVG~~~l~~~~~~~~~eI~ 517 (609)
+|..+||+++++|++.+.+|.+...+... ...++.+++...+. .+|++.. ++.+||++.+.. ..+.++|.
T Consensus 184 ~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~~~~~~~~d~~gd~givG~~~~~~--~~~~~~I~ 261 (320)
T TIGR01686 184 ELSLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEEIVTVSMSDRFGDSGIIGIFVFEK--KEGNLFID 261 (320)
T ss_pred CCEEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCCEEEEEEEecCCCCceEEEEEEEe--cCCcEEEE
Confidence 34457999999999999999876543322 24567777776652 3444432 567999998763 35678999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe------HHHHHHHHHCCCeEe
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFREC 569 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t------~~a~~fYek~GF~~~ 569 (609)
.++|+|++||+|+|++||++++++|++.|++.+++.+ .++++||+++||+..
T Consensus 262 ~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 262 DLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 9999999999999999999999999999999998865 378999999999854
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-10 Score=103.59 Aligned_cols=120 Identities=23% Similarity=0.369 Sum_probs=96.7
Q ss_pred cccccCCcCCHHH-HHHHHhhhHhhccCccCCHHHHHhhc-------CeEE--EEEE--CCEEEEEEEEEEe-----cCC
Q 007275 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------DSFY--VVER--EGQIIACAALFPF-----FKE 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~-I~~L~~~~~~~~~~~~~~~e~l~~~i-------~~~~--V~~~--dg~IVG~~~l~~~-----~~~ 511 (609)
..+||+..+|+.. ..+++.++...+.. ++++|.... ..|+ |+++ .++|||.+.+.-. .-.
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~v---t~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g 83 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVV---TREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCG 83 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhcccc---CHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccc
Confidence 4799999999986 89999998888775 344443332 2233 3343 3889999999742 124
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
..++|.+++|+++||||++|+.|++.+...++..||.++.|.| .....||+|+||...+.
T Consensus 84 ~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG~s~~~~ 144 (150)
T KOG3396|consen 84 SRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCGYSNAGN 144 (150)
T ss_pred ccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcCccccch
Confidence 6689999999999999999999999999999999999999999 47899999999988653
|
|
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.4e-10 Score=128.94 Aligned_cols=121 Identities=18% Similarity=0.242 Sum_probs=94.1
Q ss_pred cccccC-CcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEE--CCEEEEEEEEEEe-----cCCCeEEE
Q 007275 449 EGTRTA-KVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER--EGQIIACAALFPF-----FKEKCGEV 516 (609)
Q Consensus 449 ~~IR~a-~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~--dg~IVG~~~l~~~-----~~~~~~eI 516 (609)
..||++ +.+|++.|.++++.. ...+++.+.+.... ..+|++++ ++++|||+..... ......+|
T Consensus 83 ~~IR~~~~~~D~~~I~~L~~~~----~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i 158 (547)
T TIGR03103 83 FTVRRLRGPADVDAINRLYAAR----GMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSL 158 (547)
T ss_pred cEEEeCCChhHHHHHHHHHHhc----CCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEE
Confidence 569997 789999999997663 22344545444333 35777775 6899999976422 11234689
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
.+++|+|+|||+|+|++||+.+++++++.|+..+++.+ ..+++||+|+||+.+....
T Consensus 159 ~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y~ 219 (547)
T TIGR03103 159 WCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIPVFA 219 (547)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEeeEEE
Confidence 99999999999999999999999999999999999987 3789999999999876543
|
Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein. |
| >COG0456 RimI Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-10 Score=107.45 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=94.2
Q ss_pred ccccccccCCcCCHH--HHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEE---CC----EEEEEEEEEEecCC-
Q 007275 446 DLYEGTRTAKVTDLS--GIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER---EG----QIIACAALFPFFKE- 511 (609)
Q Consensus 446 d~~~~IR~a~~~D~~--~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~---dg----~IVG~~~l~~~~~~- 511 (609)
.+...+|++...|++ .+..+........ .+|+...+...+ ..+++... ++ +++||+........
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~ 86 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIR--LPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRP 86 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCC--CcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCc
Confidence 344568999999998 5555532222211 566766666554 44566655 33 59999988633332
Q ss_pred ---CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC-CEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 512 ---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL-DMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ---~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~-~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|||++||+.+++.+++.+. ..+.|.+ ..|+.||+++||+.....
T Consensus 87 ~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~ 155 (177)
T COG0456 87 SADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIR 155 (177)
T ss_pred cccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEEEeee
Confidence 278999999999999999999999999999999987 8888888 479999999999998665
|
|
| >TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.2e-10 Score=104.09 Aligned_cols=121 Identities=18% Similarity=0.182 Sum_probs=93.3
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccC---ccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEecC-CCeEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK-EKCGEVA 517 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~~-~~~~eI~ 517 (609)
.+||++++|.+.+.++.++.....+. ...+.+....++ ..++++..+|++||++.+..... ...++++
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~g 81 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFWG 81 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEEE
Confidence 58999999999999998765444332 123433322222 35778888999999999985432 3456774
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+++.|.+| +|+|+++++.++++|.+ .+++++.+.+ .++++||+|+||+.++..
T Consensus 82 -~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~ 139 (156)
T TIGR03585 82 -IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFEREGVF 139 (156)
T ss_pred -EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeEeeee
Confidence 55999999 99999999999999985 6999999887 489999999999998765
|
Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar. |
| >COG3153 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.4e-10 Score=105.22 Aligned_cols=143 Identities=17% Similarity=0.232 Sum_probs=104.4
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecCC----CeEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKE----KCGEVAA 518 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~----~~~eI~~ 518 (609)
++..||+.++.|++.|.++.+.....+- .....+.+.+.. ...+|+.+|+++||.+.+++..-+ ...-|+.
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~~~~-e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaP 80 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFGPGR-EAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAP 80 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhhcch-HHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEe
Confidence 3456999999999999999776554111 111122222222 346888889999999999874322 4467899
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCC
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 597 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~ 597 (609)
++|+|+|||||||.+||+..++.++..|+..+.+.- ...||.++||+......++.. ...+++.++.+.|-.
T Consensus 81 LaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlG--dp~YY~rfGF~~~~~~~l~~p-----~~~~~~~fl~~~L~~ 152 (171)
T COG3153 81 LAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLG--DPTYYSRFGFEPAAGAKLYAP-----GPVPDERFLALELGD 152 (171)
T ss_pred EEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEec--CcccccccCcEEccccccccC-----CCCCCceEEEEEccC
Confidence 999999999999999999999999999999987744 678999999999877655531 113445555566554
|
|
| >PLN02551 aspartokinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-09 Score=119.71 Aligned_cols=197 Identities=16% Similarity=0.139 Sum_probs=119.9
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcC-------Cccc-c--------------
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERG-------HEAK-Y-------------- 156 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g-------~~~~-~-------------- 156 (609)
.++|.|+||+.+.+.+ ++++++-|..- ...++|+|.++..-+...|.++. .+.. .
T Consensus 52 ~~~V~KFGGtSv~~~e~i~~v~~iI~~~--~~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i~~~h~~~ 129 (521)
T PLN02551 52 LTVVMKFGGSSVASAERMREVADLILSF--PDERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAIRELHLRT 129 (521)
T ss_pred ceEEEEECCCccCCHHHHHHHHHHHHhc--CCCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence 4679999999998854 66776655532 23457788886433333332221 0000 0
Q ss_pred ---------------------cCCcc---CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeec
Q 007275 157 ---------------------LGRYR---ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVA 212 (609)
Q Consensus 157 ---------------------~~g~r---vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~ 212 (609)
..|.. ..++...+.+......+...|.+. .|++.|++ +..+++.
T Consensus 130 ~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~--------~L~~~Gi~----a~~lda~ 197 (521)
T PLN02551 130 ADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAA--------YLNKIGVK----ARQYDAF 197 (521)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHH--------HHHHCCCC----cEEechH
Confidence 00100 011222233333333445555554 47888887 5555554
Q ss_pred CCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH-----hCCCeEEEcCC-ccC-CCCcEEEe---cHHHHHHHHHHH
Q 007275 213 SGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL-----DGGCLVILSNL-GYS-SSGEVLNC---NTYEVATACALA 282 (609)
Q Consensus 213 d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL-----~~G~IPVi~~~-~~~-~~ge~~~i---d~D~lAa~lA~~ 282 (609)
+-.+++.. +|+. ..+.......+...+ +.+.|||+.+. +.+ ..|++..+ -+|..|+.+|.+
T Consensus 198 ~~gi~t~~--------~~~~-a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~~~G~~ttLGRGGSD~sA~~la~~ 268 (521)
T PLN02551 198 DIGFITTD--------DFTN-ADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGWKTGAITTLGRGGSDLTATTIGKA 268 (521)
T ss_pred HcceEecC--------CCCc-cchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCCCCCcEEecCCChHHHHHHHHHHH
Confidence 43344321 1221 112223333444443 35689999996 667 78988765 489999999999
Q ss_pred cCCCEEEEEeccccc---C----CCCccccccCHHHHHHHHHhh
Q 007275 283 IEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (609)
Q Consensus 283 L~Ad~LIiLTDvdgv---~----~~~~lI~~it~~e~~~l~~~~ 319 (609)
|+|+.+.+.|||||+ | +++++|++++.+|+.+|..-|
T Consensus 269 L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~G 312 (521)
T PLN02551 269 LGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFG 312 (521)
T ss_pred cCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCC
Confidence 999999999999998 3 568999999999999986544
|
|
| >COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-09 Score=100.69 Aligned_cols=113 Identities=13% Similarity=0.185 Sum_probs=85.3
Q ss_pred hCCCeEEEcCCc----cCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC---CCCccccccCHHHHHHHHHhhch
Q 007275 249 DGGCLVILSNLG----YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---ESGHLIRFLTLQEADSLIRQRVK 321 (609)
Q Consensus 249 ~~G~IPVi~~~~----~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~---~~~~lI~~it~~e~~~l~~~~~~ 321 (609)
..+.+||+-|-. .++--+.+-+-+|.+|..+|.+++|.++|+.|||||++ +++++|++|+..|++.- ..
T Consensus 91 ~~~~~aVLLPyrlLr~~DplpHSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~~~kLv~eI~A~dl~~~-~t--- 166 (212)
T COG2054 91 KPDAKAVLLPYRLLRKTDPLPHSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDPKGKLVREIRASDLKTG-ET--- 166 (212)
T ss_pred CcccceEeeehHhhhcCCCCCcceeecccHHHHHHHHHcCCcEEEEEecCCcccccCCcchhhhhhhHhhcccC-cc---
Confidence 456677776632 34445678899999999999999999999999999985 55779998887765431 00
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
..| + +.
T Consensus 167 --------------------~vD---------------------------------~---------------------~~ 172 (212)
T COG2054 167 --------------------SVD---------------------------------P---------------------YL 172 (212)
T ss_pred --------------------ccc---------------------------------c---------------------hh
Confidence 011 2 66
Q ss_pred HHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|+| +.+.+.. +.++||..|.++++.+...+.+||.|.+
T Consensus 173 P~L-----l~k~~m~-~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 173 PKL-----LVKYKMN-CRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred hHH-----HHHcCCc-eEEECCCCHHHHHHHHhccccceEEEeC
Confidence 665 4566776 8999999999999988777789999875
|
|
| >PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-09 Score=102.99 Aligned_cols=124 Identities=11% Similarity=0.096 Sum_probs=94.1
Q ss_pred ccccccCCcCCHHHHHHHHhhh--Hhhc---cC-ccCCHHHHHhhc-----------CeEEEEEECCEEEEEEEEEEecC
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPL--VESG---AL-VRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK 510 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~--~~~~---~~-~~~~~e~l~~~i-----------~~~~V~~~dg~IVG~~~l~~~~~ 510 (609)
...+|+++++|++.+.+++... .... +. .+.+.++..+++ ..+|++..++++||++.+.....
T Consensus 10 rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~~ 89 (179)
T PRK10151 10 SLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIEP 89 (179)
T ss_pred cEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeecc
Confidence 3569999999999999998432 2111 11 123444444433 12577778999999999875432
Q ss_pred -CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 511 -EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 -~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...++| .+.++|+|||+|+|+++++.+++++.+ .+++++.+.+ .++.++|+|+||+.++..
T Consensus 90 ~~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~ 156 (179)
T PRK10151 90 LNKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCL 156 (179)
T ss_pred CCCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEe
Confidence 356788 578999999999999999999999976 6899998877 489999999999998876
|
|
| >PRK10562 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.6e-09 Score=100.64 Aligned_cols=113 Identities=19% Similarity=0.267 Sum_probs=79.9
Q ss_pred ccccCCcCCHHHHHHHHhhhHhh--ccCcc--C--CHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVES--GALVR--R--TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~--~~~~~--~--~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~ia 520 (609)
.||+++.+|++.+.+++...... .+... + ..+.+.++. ..++++..++++||++.+... ..+..++
T Consensus 1 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~~-----~~i~~~~ 75 (145)
T PRK10562 1 MIREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLEG-----RFVGALF 75 (145)
T ss_pred CcccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEeec-----cEEEEEE
Confidence 38999999999999997543211 11100 0 011111111 245777888999999988622 3688899
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|+|+|||+|+|++||+++++.+ +.+.+.+ .++.+||+|+||+.++..
T Consensus 76 v~~~~rg~G~g~~ll~~~~~~~-----~~~~~~v~~~N~~s~~~y~k~Gf~~~~~~ 126 (145)
T PRK10562 76 VAPKAVRRGIGKALMQHVQQRY-----PHLSLEVYQKNQRAVNFYHAQGFRIVDSA 126 (145)
T ss_pred ECHHHcCCCHHHHHHHHHHhhC-----CeEEEEEEcCChHHHHHHHHCCCEEcccc
Confidence 9999999999999999998853 3455544 488999999999998765
|
|
| >PRK15130 spermidine N1-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.6e-09 Score=105.04 Aligned_cols=123 Identities=20% Similarity=0.222 Sum_probs=92.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCC---HHH----HHhhc----CeEEEEEECCEEEEEEEEEEecC-CCeEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT---DEE----LLKAL----DSFYVVEREGQIIACAALFPFFK-EKCGEV 516 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~---~e~----l~~~i----~~~~V~~~dg~IVG~~~l~~~~~-~~~~eI 516 (609)
..+|+++.+|++.+.++..+.....+..... ..+ +.... ...|++..++++||++.+..... ...+++
T Consensus 7 l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~~~ 86 (186)
T PRK15130 7 VKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEF 86 (186)
T ss_pred eEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeEEE
Confidence 4699999999999999976654322221111 111 11111 34677788999999999875432 345667
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|+++++.+++++.+ .++++|.+.+ .++.+||+|+||+..+..
T Consensus 87 -~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~ 146 (186)
T PRK15130 87 -QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGEL 146 (186)
T ss_pred -EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEE
Confidence 599999999999999999999999975 7999999887 378999999999998764
|
|
| >PRK01346 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=118.81 Aligned_cols=119 Identities=18% Similarity=0.164 Sum_probs=92.4
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh---c--CeEEEEEECCEEEEEEEEEEec-----C--CCeE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA---L--DSFYVVEREGQIIACAALFPFF-----K--EKCG 514 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~---i--~~~~V~~~dg~IVG~~~l~~~~-----~--~~~~ 514 (609)
|..+||+++.+|++.+.++....... ..+.+.+..+ . ..+++++++++++|++.+.+.. . -...
T Consensus 5 ~~~~iR~~~~~D~~~i~~L~~~~f~~----~~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~ 80 (411)
T PRK01346 5 MAITIRTATEEDWPAWFRAAATGFGD----SPSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAA 80 (411)
T ss_pred CCceeecCCHHHHHHHHHHHHHHcCC----CCChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCcccee
Confidence 44579999999999999997654322 1122222222 1 3567888899999999987532 1 1468
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECS 570 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~ 570 (609)
+|..++|+|+|||+|+|++||+.+++.+++.|+..+.+.+. ..+||+++||..+.
T Consensus 81 ~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~-~~~~Y~r~Gf~~~~ 135 (411)
T PRK01346 81 GVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTAS-EGGIYGRFGYGPAT 135 (411)
T ss_pred EEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECC-chhhHhhCCCeecc
Confidence 89999999999999999999999999999999988888763 35899999999774
|
|
| >PHA01807 hypothetical protein | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.4e-09 Score=99.30 Aligned_cols=111 Identities=19% Similarity=0.165 Sum_probs=79.8
Q ss_pred CCcCCHHHHHHHHhhhHhhccC-ccCC--H---HHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeE---EEEEEE
Q 007275 454 AKVTDLSGIKQIIQPLVESGAL-VRRT--D---EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCG---EVAAIG 520 (609)
Q Consensus 454 a~~~D~~~I~~L~~~~~~~~~~-~~~~--~---e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~---eI~~ia 520 (609)
++.+|++.+..+......+... .+|. . +.+.+.. ...++++.|++++||+.+.+....... .+..|+
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lY 88 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQY 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeEE
Confidence 6778888888887664333211 1111 1 2222221 335777889999999998754333223 345689
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHC
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSR 564 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~ 564 (609)
|+|+|||+|+|++||+.++++|++.|+..+.+.+ .++.+||++.
T Consensus 89 V~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 89 VLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 9999999999999999999999999999998888 3899999983
|
|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.7e-09 Score=108.41 Aligned_cols=123 Identities=18% Similarity=0.208 Sum_probs=89.7
Q ss_pred cccccCC-cCCHHHHHHHHhhhHhhcc-CccCCHHHHHhhc-------CeEEEEEE--CCEEEEEEEEEEecC-CCeEEE
Q 007275 449 EGTRTAK-VTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFFK-EKCGEV 516 (609)
Q Consensus 449 ~~IR~a~-~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~i-------~~~~V~~~--dg~IVG~~~l~~~~~-~~~~eI 516 (609)
.++|+++ ..|.+.+.++.+....... ...|+.+.+.... ..++++.+ ++++|||+.+..... ...++|
T Consensus 150 ~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i 229 (292)
T TIGR03448 150 VTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPALGEV 229 (292)
T ss_pred eEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCceeEE
Confidence 3678875 4588888877655443222 1345555554321 23566665 689999976553322 235678
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
..++|+|+|||||+|++||+.+++++++.|+..+.+.+ ..+.+||+|+||+..+.
T Consensus 230 ~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 288 (292)
T TIGR03448 230 YVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAEV 288 (292)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEccc
Confidence 78999999999999999999999999999999988877 37899999999998654
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=6e-09 Score=122.01 Aligned_cols=112 Identities=20% Similarity=0.230 Sum_probs=81.8
Q ss_pred hhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeE-eeeCHHHHHHHHhCC--CeEEEcCC-ccCCCCcEEE
Q 007275 194 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRERLDGG--CLVILSNL-GYSSSGEVLN 269 (609)
Q Consensus 194 ~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v-~~v~~~~I~~LL~~G--~IPVi~~~-~~~~~ge~~~ 269 (609)
.|++.|++ +..+++.+ ++.... + +...+ .....+.|++++..+ .|||+++. +.+..|++..
T Consensus 140 ~L~~~G~~----a~~ld~~~--~i~~~~--------~-~~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~~G~~tt 204 (810)
T PRK09466 140 LLNQQGLP----AAWLDARS--FLRAER--------A-AQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNEAGETVL 204 (810)
T ss_pred HHHhCCCC----cEEEcHHH--heecCC--------C-CCcccchhhhHHHHHHHHhccCCeEEEeeCccccCCCCCEEE
Confidence 47888887 55554433 333221 1 11122 122356788877654 79999986 6677888776
Q ss_pred e---cHHHHHHHHHHHcCCCEEEEEeccccc---C----CCCccccccCHHHHHHHHHhhc
Q 007275 270 C---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 270 i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~----~~~~lI~~it~~e~~~l~~~~~ 320 (609)
+ -+|..|+.+|.+|+|+.+.|.|||||+ | |++++|++|+.+|+.+|..-|+
T Consensus 205 LGRGGSD~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Ga 265 (810)
T PRK09466 205 LGRNGSDYSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAA 265 (810)
T ss_pred cCCChHHHHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHHHHHcCc
Confidence 5 489999999999999999999999998 3 5689999999999999976544
|
|
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-09 Score=113.52 Aligned_cols=76 Identities=26% Similarity=0.507 Sum_probs=68.2
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCe
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFR 567 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~ 567 (609)
.+++.++++++|||+.+.. .+|..++|+|+|||+|+|++||+.++++|++.|++.+++.+. .+.+||+++||+
T Consensus 7 ~~~v~~~~~~iVG~~~l~~------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~ 80 (297)
T cd02169 7 TVGIFDDAGELIATGSIAG------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFK 80 (297)
T ss_pred EEEEEEECCEEEEEEEecc------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCE
Confidence 4667778899999998862 269999999999999999999999999999999999999984 578999999999
Q ss_pred Eee
Q 007275 568 ECS 570 (609)
Q Consensus 568 ~~~ 570 (609)
..+
T Consensus 81 ~~~ 83 (297)
T cd02169 81 ELA 83 (297)
T ss_pred Eec
Confidence 887
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. |
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.1e-09 Score=109.46 Aligned_cols=114 Identities=15% Similarity=0.190 Sum_probs=85.9
Q ss_pred ccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 452 R~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
.+++++|++++.+|+..........+++.+.. ..+ ...+++.+++++||++.+.+.. ....++..++|+|+
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~-~~~~~~~~l~V~p~ 81 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVL-RGLREPGAGHTRHLVAVDSDPIVGYANLVPAR-GTDPAMAELVVHPA 81 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHH-hhccccCCCCceEEEEEECCEEEEEEEEEcCC-CCcceEEEEEECHh
Confidence 46788999999999887655543445665443 332 2367778889999999987542 33467999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
|||+|+|++||+.+++.+. ..+.+.+ ..+++||+++||+....
T Consensus 82 ~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 82 HRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred hcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 9999999999999999864 3344444 37899999999987753
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >PRK13688 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.4e-09 Score=101.58 Aligned_cols=107 Identities=19% Similarity=0.345 Sum_probs=77.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEec---------CCCeEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF---------KEKCGEVAAI 519 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~---------~~~~~eI~~i 519 (609)
..+|++..+|++++.++....... ..-..++++..+++++|++.+...+ .+..++|..+
T Consensus 18 ~~~~~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l 85 (156)
T PRK13688 18 KKFREFGNQELSMLEELQANIIEN------------DSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKL 85 (156)
T ss_pred HHHHHhcHHHHHHHHhhhhhEeec------------CCCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEE
Confidence 357888888999998884332210 0113467788899999998875321 2456799999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
+|+|+|||||+|++||+.+. +.++. +.+.+ ..+.+||+|+||+..+..
T Consensus 86 ~V~p~~rgkGiG~~Ll~~a~----~~~~~-~~~~~~~~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 86 EVLPKYQNRGYGEMLVDFAK----SFQLP-IKTIARNKSKDFWLKLGFTPVEYK 134 (156)
T ss_pred EECHHHcCCCHHHHHHHHHH----HhCCe-EEEEeccchHHHHHhCCCEEeEEe
Confidence 99999999999999998644 44544 33333 468899999999998766
|
|
| >PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.2e-09 Score=94.22 Aligned_cols=118 Identities=20% Similarity=0.269 Sum_probs=86.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc---Ccc-CCHHHHHhhc--------C---eEEEEEE--CCEEEEEEEEEE-ecC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVR-RTDEELLKAL--------D---SFYVVER--EGQIIACAALFP-FFK 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~---~~~-~~~e~l~~~i--------~---~~~V~~~--dg~IVG~~~l~~-~~~ 510 (609)
..||+++++|.+.+.++.++.....+ ... .+.+...+++ . .+|++.. ++++||++.+.. ...
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~ 81 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKN 81 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETT
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccC
Confidence 36899999999999999864333222 111 2544433333 1 2344543 357999999953 335
Q ss_pred CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEe----HHHHHHHHHCCCe
Q 007275 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFR 567 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A-~~~G~~~I~l~t----~~a~~fYek~GF~ 567 (609)
...++|+ +.|.|+|||+|+|+.++..+++++ ++.++.++.+.+ .++.++++|+||+
T Consensus 82 ~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 82 NNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 6789995 999999999999999999999999 578999999988 4899999999996
|
... |
| >TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=108.25 Aligned_cols=81 Identities=26% Similarity=0.441 Sum_probs=71.5
Q ss_pred hcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHC
Q 007275 486 ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSR 564 (609)
Q Consensus 486 ~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~ 564 (609)
.++.++++++|+++|||+.+.. ..|.+++|+|+|||+|+|++||+.+++++++.|+..+++.|. ...+||+++
T Consensus 29 ~~d~~vv~~~~~~lVg~g~l~g------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~kl 102 (332)
T TIGR00124 29 PLEIFIAVYEDEEIIGCGGIAG------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYC 102 (332)
T ss_pred CCCEEEEEEECCEEEEEEEEec------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHc
Confidence 3466788889999999999852 258899999999999999999999999999999999999994 567899999
Q ss_pred CCeEeeee
Q 007275 565 GFRECSIE 572 (609)
Q Consensus 565 GF~~~~~~ 572 (609)
||......
T Consensus 103 GF~~i~~~ 110 (332)
T TIGR00124 103 GFKTLAEA 110 (332)
T ss_pred CCEEeeee
Confidence 99987654
|
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate. |
| >PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.6e-08 Score=98.79 Aligned_cols=123 Identities=12% Similarity=0.071 Sum_probs=88.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHh--hccCccC-----CHHH-------HHhhc----CeEEEEEE--CCEEEEEEEEEEe
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE--SGALVRR-----TDEE-------LLKAL----DSFYVVER--EGQIIACAALFPF 508 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~--~~~~~~~-----~~e~-------l~~~i----~~~~V~~~--dg~IVG~~~l~~~ 508 (609)
..||+++.+|.+.+.+++.+... ..+.... ..+. +.... ...|++.. ++++||++.+...
T Consensus 18 l~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~ 97 (194)
T PRK10809 18 LVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNV 97 (194)
T ss_pred EEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEee
Confidence 46999999999999999875221 1111110 0111 11111 22455543 6799999999754
Q ss_pred cCC--CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 509 FKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 509 ~~~--~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
... ..++| .+.|+|+|||||+|+.+++.++++|.+ .|+++|.+.+ .++.++|+|+||+..+..
T Consensus 98 ~~~~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~ 167 (194)
T PRK10809 98 VRGSFHACYL-GYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYA 167 (194)
T ss_pred cCCCeeeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeee
Confidence 321 34566 688999999999999999999999987 6999999988 489999999999987754
|
|
| >COG2153 ElaA Predicted acyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.5e-08 Score=88.34 Aligned_cols=93 Identities=25% Similarity=0.327 Sum_probs=74.5
Q ss_pred HHHHhhcCeEEEEEECCEEEEEEEEEEecC-CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEeH-HH
Q 007275 481 EELLKALDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLTT-RT 557 (609)
Q Consensus 481 e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~-~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G-~~~I~l~t~-~a 557 (609)
.++.....++|+...||++++|+.+.|... .....|++++|+|++||+|+|.+||..+++.+.+.. -+.+.+.+. ..
T Consensus 43 ~Dl~~~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahL 122 (155)
T COG2153 43 KDLLGDTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHL 122 (155)
T ss_pred cccccccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHH
Confidence 344445567777777999999999986432 233679999999999999999999999999998865 445777763 68
Q ss_pred HHHHHHCCCeEeeeec
Q 007275 558 ADWFKSRGFRECSIEM 573 (609)
Q Consensus 558 ~~fYek~GF~~~~~~~ 573 (609)
.+||.++||..++...
T Consensus 123 q~fYa~~GFv~~~e~y 138 (155)
T COG2153 123 QDFYASFGFVRVGEEY 138 (155)
T ss_pred HHHHHHhCcEEcCchh
Confidence 8999999999987664
|
|
| >KOG3397 consensus Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-07 Score=87.78 Aligned_cols=79 Identities=22% Similarity=0.353 Sum_probs=70.8
Q ss_pred EECCEEEEEEEEEEecC-CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 494 EREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 494 ~~dg~IVG~~~l~~~~~-~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
+...++||-..+.+... +....+..++|+.+.||+|+|+.||+.++.||+..|++.++|.|..-.+||+++||+.++..
T Consensus 63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ~~FYe~lGYe~c~Pi 142 (225)
T KOG3397|consen 63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQCRFYESLGYEKCDPI 142 (225)
T ss_pred ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccchhhhhhhcccccCce
Confidence 56788999999987544 45678999999999999999999999999999999999999999888999999999988654
|
|
| >KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-07 Score=87.67 Aligned_cols=140 Identities=19% Similarity=0.213 Sum_probs=96.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEE-ECCEEEEEEEEEEec----CCCeEEEEEEEEccc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFF----KEKCGEVAAIGVSPE 524 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~-~dg~IVG~~~l~~~~----~~~~~eI~~iaV~p~ 524 (609)
.||.++.+|+-......-.-..+.+......-....|....||++ .+|+|||++-..... +...++|..++|...
T Consensus 3 ~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs 82 (193)
T KOG3235|consen 3 NIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRS 82 (193)
T ss_pred ccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhh
Confidence 589999998877665422211122222222223334556677887 689999998776332 335789999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHH-HCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 525 CRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFK-SRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYe-k~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
||+.|++++||....+-..+ .+.+.+.|.+ -.|..+|. .+||++++.+. .|.......+-|++-|
T Consensus 83 ~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~-------kYYadGedAyaM~~~L 153 (193)
T KOG3235|consen 83 YRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEP-------KYYADGEDAYAMRKDL 153 (193)
T ss_pred HHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccc-------ccccccHHHHHHHHHH
Confidence 99999999999998776544 5677777777 25789999 79999987762 3444555666666554
|
|
| >KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.8e-07 Score=84.34 Aligned_cols=123 Identities=21% Similarity=0.159 Sum_probs=100.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEE-CCEEEEEEEEEEe--cCCCeEEEEEEEEcccCc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPF--FKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~-dg~IVG~~~l~~~--~~~~~~eI~~iaV~p~~R 526 (609)
++||++.+|+...-.+.-+...+.+........+..|...+.+++. +++|.|++.=... .....+++..+.|.|+||
T Consensus 3 t~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~R 82 (173)
T KOG3234|consen 3 TIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYR 82 (173)
T ss_pred ccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhHH
Confidence 6899999999888888777777788878888888888888888875 5789998866421 223557899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+.|+|+.||+.+++-....+...+.+.+ +.|+.+|+++||......
T Consensus 83 rl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~V 132 (173)
T KOG3234|consen 83 RLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYRTV 132 (173)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEEEee
Confidence 9999999999999999877666666655 479999999999987654
|
|
| >KOG3138 consensus Predicted N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.7e-07 Score=89.13 Aligned_cols=147 Identities=18% Similarity=0.225 Sum_probs=97.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCC---------CeEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE---------KCGEVAAI 519 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~---------~~~eI~~i 519 (609)
+.++..++.|+..+.++.++.....+...+.++.... -+..-++.-++..+|-.++...... ...+|-.+
T Consensus 17 ~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~-~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~L 95 (187)
T KOG3138|consen 17 IELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSN-GDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILSL 95 (187)
T ss_pred eeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhc-CCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEee
Confidence 5699999999999999977665555443322222211 1212223333444444444321111 13789999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcc-cCCCceeEEe
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRIN-LSRNSKYYMK 593 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G-~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~-~~~~s~i~mk 593 (609)
.|.|.||.+|||++||+.++++|.+.. ++.+++.+ ..+..||+++||+.+.....- |. .......+|.
T Consensus 96 gvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~------y~~~~~~~~~~l~ 169 (187)
T KOG3138|consen 96 GVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNY------YSILGPPDDSFLR 169 (187)
T ss_pred cccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccc------cccccCcchhhhh
Confidence 999999999999999999999999877 88899987 378999999999998655211 11 2234556666
Q ss_pred ecCCCCCCC
Q 007275 594 KLLPDTSGI 602 (609)
Q Consensus 594 kll~~~~g~ 602 (609)
+.+.+.+|-
T Consensus 170 ~~~~~~~~~ 178 (187)
T KOG3138|consen 170 KLLIHGSGS 178 (187)
T ss_pred hheecCCCC
Confidence 666665543
|
|
| >PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.6e-06 Score=73.91 Aligned_cols=58 Identities=28% Similarity=0.472 Sum_probs=48.4
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++|..++|+|+|||+|+|+.|+..+.+.+.+.|... ++.+ ..+.++|+|+||+.....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~-~l~v~~~N~~s~~ly~klGf~~~~~~ 83 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTP-FLYVDADNEASIRLYEKLGFREIEEE 83 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEE-EEEEETT-HHHHHHHHHCT-EEEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcE-EEEEECCCHHHHHHHHHcCCEEEEEE
Confidence 789999999999999999999999999999888764 3443 378999999999998654
|
This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B. |
| >KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-06 Score=83.76 Aligned_cols=116 Identities=18% Similarity=0.174 Sum_probs=84.0
Q ss_pred CCHHHHHHHHhhhHhh-------ccCccCCHHHHHhhcCeEEEEEECC-EEEEEEEEEEecCCC--eEEEEEEEEcccCc
Q 007275 457 TDLSGIKQIIQPLVES-------GALVRRTDEELLKALDSFYVVEREG-QIIACAALFPFFKEK--CGEVAAIGVSPECR 526 (609)
Q Consensus 457 ~D~~~I~~L~~~~~~~-------~~~~~~~~e~l~~~i~~~~V~~~dg-~IVG~~~l~~~~~~~--~~eI~~iaV~p~~R 526 (609)
+|++-..+|...-... ++......+++...-..|+++.+++ +++||..+....+.+ ..++--+-|.++||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 5666666766542111 1211112334444446778887776 899999998544444 56666778889999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|+|||+.||+.++..+.....+.|.|++ .++..||+++||......
T Consensus 134 ~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~s 183 (202)
T KOG2488|consen 134 GKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEES 183 (202)
T ss_pred ccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCCCC
Confidence 9999999999999999988888888877 489999999999876543
|
|
| >cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.7e-06 Score=66.32 Aligned_cols=62 Identities=34% Similarity=0.483 Sum_probs=54.2
Q ss_pred EEEEECCEEEEEEEEEEecC-CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 007275 491 YVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552 (609)
Q Consensus 491 ~V~~~dg~IVG~~~l~~~~~-~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l 552 (609)
+++..+++++|++.+.+... ....++..++|+|+|||+|+|++|+..+++++.+.+++.+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 45667899999999986432 467899999999999999999999999999999999998876
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera |
| >COG3393 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.3e-06 Score=84.86 Aligned_cols=83 Identities=22% Similarity=0.307 Sum_probs=67.4
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE-e--HHHHHHHHHCC
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-T--TRTADWFKSRG 565 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~-t--~~a~~fYek~G 565 (609)
..+..+.||+||+.+... ...+.++.|..++++|+|||+|+++.|+..+.+..-..|.+.+... + ..|.+.|++.|
T Consensus 178 ~~~f~~~d~~iVa~A~t~-a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riG 256 (268)
T COG3393 178 RTYFLEGDGKIVAKAETA-AENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIG 256 (268)
T ss_pred eEEEEccCCcEEEeeecc-ccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhC
Confidence 344455567999999877 3456789999999999999999999999999999888887654333 3 46899999999
Q ss_pred CeEeeee
Q 007275 566 FRECSIE 572 (609)
Q Consensus 566 F~~~~~~ 572 (609)
|+..+..
T Consensus 257 F~~~g~~ 263 (268)
T COG3393 257 FREIGEF 263 (268)
T ss_pred CeecceE
Confidence 9998744
|
|
| >TIGR01211 ELP3 histone acetyltransferase, ELP3 family | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.9e-06 Score=93.89 Aligned_cols=84 Identities=18% Similarity=0.291 Sum_probs=64.9
Q ss_pred eEEEEEE---CCEEEEEEEEEEecC-------CCeEEEEEEEE-----------cccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 489 SFYVVER---EGQIIACAALFPFFK-------EKCGEVAAIGV-----------SPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 489 ~~~V~~~---dg~IVG~~~l~~~~~-------~~~~eI~~iaV-----------~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.+|.... ++.++||+.+....+ +.++.|..+.| +|+|||+|+|++||++++++|++.|+
T Consensus 412 e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~ 491 (522)
T TIGR01211 412 EFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGS 491 (522)
T ss_pred eEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCC
Confidence 3444443 578999999984322 12444554443 59999999999999999999999999
Q ss_pred CEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 548 DMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 548 ~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
+.+.+.+ ..+.+||+++||+..+..
T Consensus 492 ~~i~v~s~~~A~~FY~klGf~~~g~y 517 (522)
T TIGR01211 492 EKILVISGIGVREYYRKLGYELDGPY 517 (522)
T ss_pred CEEEEeeCchHHHHHHHCCCEEEcce
Confidence 9999877 479999999999986543
|
The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. |
| >COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.6e-05 Score=75.42 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=65.8
Q ss_pred CEEEEEEEEEEecC---CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeE
Q 007275 497 GQIIACAALFPFFK---EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRE 568 (609)
Q Consensus 497 g~IVG~~~l~~~~~---~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~ 568 (609)
+++||.+.+..... ...++| .+.+.|+|+|||+|++.+..+++++.. .+++++.+.+ .++.+.++|+||+.
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~ 155 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRL 155 (187)
T ss_pred CeEEEEEEEEEeccccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChh
Confidence 48999999986552 566777 667799999999999999999999976 8999999988 48999999999999
Q ss_pred eeeec
Q 007275 569 CSIEM 573 (609)
Q Consensus 569 ~~~~~ 573 (609)
.+...
T Consensus 156 eg~~~ 160 (187)
T COG1670 156 EGELR 160 (187)
T ss_pred hhhhh
Confidence 87654
|
|
| >PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.6e-05 Score=66.46 Aligned_cols=70 Identities=24% Similarity=0.307 Sum_probs=58.0
Q ss_pred EEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHC
Q 007275 492 VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 564 (609)
Q Consensus 492 V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~ 564 (609)
.+..||+.+|++.+.. +++...|....|.|++||||+|++|++.+.++|++.|.+ |...|.-+..|++++
T Consensus 3 ~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-v~p~C~y~~~~~~~h 72 (78)
T PF14542_consen 3 ELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-VVPTCSYVAKYFRRH 72 (78)
T ss_dssp EEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-EEETSHHHHHHHHH-
T ss_pred EEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-EEEECHHHHHHHHhC
Confidence 3455688999998863 678899999999999999999999999999999999874 557788888998875
|
|
| >COG3981 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.8e-05 Score=74.77 Aligned_cols=86 Identities=19% Similarity=0.310 Sum_probs=71.4
Q ss_pred eEEEEEECCEEEEEEEEEEecCC----CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH----HHHHH
Q 007275 489 SFYVVEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT----RTADW 560 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~----~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~----~a~~f 560 (609)
.||.+..|+++||++.+.....+ .-++| ...|.|..||+|+|+++++.++++|++.|++.+.+.|. .+++-
T Consensus 70 ~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkv 148 (174)
T COG3981 70 TYWAVDEDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKV 148 (174)
T ss_pred eEEEEecCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHH
Confidence 46666678999999999843322 35678 78999999999999999999999999999999999983 78899
Q ss_pred HHHCCCeEeeeecch
Q 007275 561 FKSRGFRECSIEMIP 575 (609)
Q Consensus 561 Yek~GF~~~~~~~lp 575 (609)
-+++|=...+.....
T Consensus 149 I~~NGGile~~~~~~ 163 (174)
T COG3981 149 IEANGGILENEFFGE 163 (174)
T ss_pred HHhcCCEEeEEEccC
Confidence 999998877665433
|
|
| >cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.7e-05 Score=77.22 Aligned_cols=78 Identities=17% Similarity=0.115 Sum_probs=62.5
Q ss_pred HHHHHHHh----CCCeEEEcCCccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEeccccc--C------CCCccccc
Q 007275 242 TRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL--D------ESGHLIRF 306 (609)
Q Consensus 242 ~~I~~LL~----~G~IPVi~~~~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv--~------~~~~lI~~ 306 (609)
+.|.+.+. .+.|||+.+.+....|++..+ -+|..|+.+|.+|+|+.+.|-|||+.. | +++++|++
T Consensus 177 ~~i~~~~~~~~~~~~v~IvtGF~~~~~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~i~taDPriV~~~~A~~i~~ 256 (304)
T cd04248 177 ERISEAFRDIDPRDELPIVTGYAKCAEGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFHLSSADPKLVGEDKARPIGR 256 (304)
T ss_pred HHHHHHHHhhccCCcEEEeCCccCCCCCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCceecCCCCccCCCCceEeCc
Confidence 34454444 578999999866667888765 489999999999999999999999722 2 46789999
Q ss_pred cCHHHHHHHHHhh
Q 007275 307 LTLQEADSLIRQR 319 (609)
Q Consensus 307 it~~e~~~l~~~~ 319 (609)
++.+|+.+|..-|
T Consensus 257 lsY~EA~ELA~~G 269 (304)
T cd04248 257 TNYDVADQLANLG 269 (304)
T ss_pred cCHHHHHHHHHcC
Confidence 9999999997544
|
Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon. |
| >PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.4e-05 Score=74.66 Aligned_cols=103 Identities=22% Similarity=0.333 Sum_probs=65.4
Q ss_pred CeEEEEEECC--EEEEEEEEEEec-----------------C-------------------CCeEEEEEEEEcccCcCCc
Q 007275 488 DSFYVVEREG--QIIACAALFPFF-----------------K-------------------EKCGEVAAIGVSPECRGQG 529 (609)
Q Consensus 488 ~~~~V~~~dg--~IVG~~~l~~~~-----------------~-------------------~~~~eI~~iaV~p~~RgqG 529 (609)
+..|+...++ +|+|++.+.... . -....|-+|+|+|++|++|
T Consensus 27 h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIAvhP~~q~~G 106 (196)
T PF13718_consen 27 HRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIAVHPDLQRMG 106 (196)
T ss_dssp EEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEEE-CCC-SSS
T ss_pred ceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEEEChhhhcCC
Confidence 5678888888 999998875310 0 1346788999999999999
Q ss_pred HHHHHHHHHHHHH-------------------------HHCCCCEEEEE---eHHHHHHHHHCCCeEeeeecchhHhhhh
Q 007275 530 QGDKLLDYIEKKA-------------------------ASLGLDMLFLL---TTRTADWFKSRGFRECSIEMIPEERRKR 581 (609)
Q Consensus 530 iG~~LL~~l~~~A-------------------------~~~G~~~I~l~---t~~a~~fYek~GF~~~~~~~lp~~~~~~ 581 (609)
+|++|++.+++++ +..++..+-+. |..-.+||.|+||..+..-..++.
T Consensus 107 ~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k~gf~pv~l~~~~n~---- 182 (196)
T PF13718_consen 107 YGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQKNGFVPVYLGQTRNE---- 182 (196)
T ss_dssp HHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHCTT-EEEEE-SS--T----
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHHCCcEEEEEecCccc----
Confidence 9999999999999 35667665443 246789999999999876543321
Q ss_pred cccCCCceeEEeec
Q 007275 582 INLSRNSKYYMKKL 595 (609)
Q Consensus 582 y~~~~~s~i~mkkl 595 (609)
.....|.+|+|.+
T Consensus 183 -~SGe~S~imlr~l 195 (196)
T PF13718_consen 183 -ASGEHSAIMLRPL 195 (196)
T ss_dssp -TT---EEEEEEE-
T ss_pred -ccCceeeeEEeec
Confidence 1234577777764
|
|
| >PRK09181 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00012 Score=81.35 Aligned_cols=79 Identities=18% Similarity=0.111 Sum_probs=64.7
Q ss_pred HHHHHHHHh----CCCeEEEcCCccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEeccccc---C------CCCccc
Q 007275 241 VTRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D------ESGHLI 304 (609)
Q Consensus 241 ~~~I~~LL~----~G~IPVi~~~~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~------~~~~lI 304 (609)
.+.|...++ .+.|||+.+...+..|++..+ -+|..|+.+|.+|+||.+.+-|||+ + | +++++|
T Consensus 182 ~~~i~~~l~~~~~~~~v~Vv~GF~~~~~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i 260 (475)
T PRK09181 182 DERIKKAFKDIDVTKELPIVTGYAKCKEGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPI 260 (475)
T ss_pred HHHHHHHHhhhccCCcEEEecCCcCCCCCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEc
Confidence 345666666 478999999865667887765 4899999999999999999999997 5 2 468899
Q ss_pred cccCHHHHHHHHHhhc
Q 007275 305 RFLTLQEADSLIRQRV 320 (609)
Q Consensus 305 ~~it~~e~~~l~~~~~ 320 (609)
++|+.+|+.+|..-|+
T Consensus 261 ~~lsy~Ea~ELA~~GA 276 (475)
T PRK09181 261 GRTNYDVADQLANLGM 276 (475)
T ss_pred CccCHHHHHHHHHcCc
Confidence 9999999999975543
|
|
| >COG3053 CitC Citrate lyase synthetase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.8e-05 Score=76.58 Aligned_cols=109 Identities=24% Similarity=0.331 Sum_probs=85.6
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEE-CCEEEEEEEEEEecCCCeEEEEEEEEcccCcCC
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~-dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~Rgq 528 (609)
.++.+.++|...+..+..-+.+++.. +...++.+.++.. |++||+|..+.- .-|.|++|+|.+||-
T Consensus 5 ~~~~v~~~e~~k~~~i~~fL~~~~l~-------~d~~ve~~v~~~~~~~~iiacGsiaG------nvikcvAvs~s~qGe 71 (352)
T COG3053 5 TFSRVKRSEKKKMAEIAEFLHQNDLR-------VDTTVEYFVAIYRDNEEIIACGSIAG------NVIKCVAVSESLQGE 71 (352)
T ss_pred EEEEEccchhhHHHHHHHHHhhcCce-------ecccceEEEEEEcCCCcEEEeccccc------ceeEEEEechhcccc
Confidence 46667777777777665445554442 2234455555655 499999999872 258899999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 529 GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 529 GiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
|+.-+|+..+.+++-++|...+|+.| +....||..+||.+...
T Consensus 72 Gl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i~~ 115 (352)
T COG3053 72 GLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQCGFSEIAS 115 (352)
T ss_pred cHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhCCceEeec
Confidence 99999999999999999999999999 46789999999998753
|
|
| >PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2 | Back alignment and domain information |
|---|
Probab=97.73 E-value=9.7e-05 Score=70.95 Aligned_cols=132 Identities=20% Similarity=0.280 Sum_probs=82.2
Q ss_pred hhhhhhhcCCCcccccccccc-ccccCCcC-CHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEE
Q 007275 429 LLLELFKRDGMGTMVASDLYE-GTRTAKVT-DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 506 (609)
Q Consensus 429 ll~el~~~~g~GT~i~~d~~~-~IR~a~~~-D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~ 506 (609)
|..||||..|.||+|.....+ .......- |.+.|.+++.+............+.+...+...|+ ++..-|.+.+.
T Consensus 2 L~kELFt~sgagTlirrG~~i~~~~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~---d~~y~~~AIVt 78 (170)
T PF04768_consen 2 LQKELFTDSGAGTLIRRGYKILKHSSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV---DEDYEGAAIVT 78 (170)
T ss_dssp HHHHHHSSSTSSEEEE----EEEESSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE---ETTSSEEEEEE
T ss_pred ccchhcCCCCCceEEecCeeeEEecCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE---eCCceEEEEEE
Confidence 778999999999999976554 34445555 89999999877653222233333333333333333 34455555665
Q ss_pred E---ecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHHHH--CCCeE
Q 007275 507 P---FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKS--RGFRE 568 (609)
Q Consensus 507 ~---~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fYek--~GF~~ 568 (609)
+ ......++|..++|.|..||.|++..++..+.+.. +.++..+ .+..+||-+ -|+-.
T Consensus 79 ~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 79 PEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDF-----PKLFWRSREDNPNNKWYFERSDGSFK 143 (170)
T ss_dssp EE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-TTHHHHHHH-SEEEE
T ss_pred ecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhc-----cceEEEecCCCCcccEEEEeeEEEEE
Confidence 3 23346899999999999999999999999986653 3355555 467788733 35544
|
7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A. |
| >COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00015 Score=65.27 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=92.9
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEe----c----------CC
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF----F----------KE 511 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~----~----------~~ 511 (609)
.|++.+|.....|..++..|.+....+-. ....+.+.......++++++|.+.||..-+.. + -+
T Consensus 5 smp~~~~D~~apd~aavLaLNNeha~els--wLe~erL~~l~~eAF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe 82 (167)
T COG3818 5 SMPILIRDVRAPDLAAVLALNNEHALELS--WLELERLYRLYKEAFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYE 82 (167)
T ss_pred ccceehhhhcCCchhhHHhccchhhhhcc--ccCHHHHHHHHHHHHHHhhccchhhheeeccccccCCCCceeehhhhCC
Confidence 45667788888899999888665332211 12233333333233577788887777654321 1 13
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH------HHHHHHHHCCCeEeeeecchh
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSIEMIPE 576 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~------~a~~fYek~GF~~~~~~~lp~ 576 (609)
...+++++.|...-||+|+|++|.+.+..+|+..|+..+.+.++ .+..|...+||.+++...+..
T Consensus 83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a~ihg 153 (167)
T COG3818 83 NFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQATIHG 153 (167)
T ss_pred ceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccceEEec
Confidence 56789999999999999999999999999999999999988882 456788889999999876553
|
|
| >PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0017 Score=66.79 Aligned_cols=92 Identities=20% Similarity=0.223 Sum_probs=65.5
Q ss_pred CCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HH
Q 007275 478 RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TR 556 (609)
Q Consensus 478 ~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~ 556 (609)
++.+++.+. ...|++..+++||+-+.-. ...++..+| .|.++|+|||||+++.+...++.+|.++|+.-.+--. ..
T Consensus 156 ~s~e~Fl~~-G~Gf~i~~~~~iVs~~~s~-~~~~~~~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~ 232 (265)
T PF12746_consen 156 SSYEDFLKN-GFGFCILHDGEIVSGCSSY-FVYENGIEI-DIETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLA 232 (265)
T ss_dssp SSHHHHHHH---EEEEEETTEEEEEEEEE-EEETTEEEE-EEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHH
T ss_pred CCHHHHHhc-CcEEEEEECCEEEEEEEEE-EEECCEEEE-EEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHH
Confidence 356666554 5667888889987644333 233567899 8999999999999999999999999999987754322 47
Q ss_pred HHHHHHHCCCeEeeee
Q 007275 557 TADWFKSRGFRECSIE 572 (609)
Q Consensus 557 a~~fYek~GF~~~~~~ 572 (609)
+.++=+|+||+....-
T Consensus 233 S~~lA~kLGf~~~~~Y 248 (265)
T PF12746_consen 233 SIALAEKLGFHFDFEY 248 (265)
T ss_dssp HHHHHHHCT--EEEEE
T ss_pred HHHHHHHcCCccccee
Confidence 8999999999976543
|
|
| >PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00095 Score=60.51 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=66.0
Q ss_pred cCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCc
Q 007275 453 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (609)
Q Consensus 453 ~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqG 529 (609)
.+++.|.-++.+++ ...+.+.+..++ ..+|++.=|+.++|.+.+.. ++..+.|..++|++--|++|
T Consensus 9 ~ls~Qd~iDL~KIw---------p~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~--~~~~~~L~~l~VRevTRrRG 77 (128)
T PF12568_consen 9 TLSEQDRIDLAKIW---------PQQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTI--SGQQAELSDLCVREVTRRRG 77 (128)
T ss_dssp S--HHHHHHHHHH----------TTS----------SSEEEEEEEETTEEEEEEEEEE--ETTEEEEEEEEE-TT-SSSS
T ss_pred CCCHHHHHHHHHhC---------CCCCHHHHHHHhccCCeEEEEEechheeeeEEEEE--cCcceEEeeEEEeecccccc
Confidence 45566666777775 222334444444 56888888999999998873 46799999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeH--------HHHHHHHHCCCeEe
Q 007275 530 QGDKLLDYIEKKAASLGLDMLFLLTT--------RTADWFKSRGFREC 569 (609)
Q Consensus 530 iG~~LL~~l~~~A~~~G~~~I~l~t~--------~a~~fYek~GF~~~ 569 (609)
+|..|++.+++.+. +++...+... ....|...+||...
T Consensus 78 VG~yLlee~~rq~p--~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 78 VGLYLLEEVLRQLP--DIKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp HHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred HHHHHHHHHHHHCC--CCcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 99999999999883 3555555431 34689999999653
|
It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A. |
| >COG2388 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00039 Score=60.64 Aligned_cols=62 Identities=29% Similarity=0.408 Sum_probs=55.0
Q ss_pred CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 007275 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I 550 (609)
..+|+...+|+.+|.+..++ .+++...|.+-+|.+++||||+|++|++.+++.|++.|++.+
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~-~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYD-RGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred ceEEEEecCCcEEEEEEEec-CCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 56788899999999998884 456789999999999999999999999999999999988554
|
|
| >COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0016 Score=75.06 Aligned_cols=79 Identities=23% Similarity=0.298 Sum_probs=57.9
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE---eHHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL---TTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~---t~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
.+.|-+|+|+|++|++|||++|++.++++|+ .++..+-+. +....+||.|+||..+......+.. ....+.
T Consensus 531 G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhls~~rn~~-----SGeys~ 604 (758)
T COG1444 531 GWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHLSPTRNAS-----SGEYTA 604 (758)
T ss_pred eeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEEecCccCcC-----CCceeE
Confidence 3578899999999999999999999999997 445555432 2477899999999998765433211 123356
Q ss_pred eEEeecCC
Q 007275 590 YYMKKLLP 597 (609)
Q Consensus 590 i~mkkll~ 597 (609)
+++|-|..
T Consensus 605 i~lkpLs~ 612 (758)
T COG1444 605 IVLKPLSD 612 (758)
T ss_pred EEEecCCH
Confidence 66666543
|
|
| >KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00031 Score=64.99 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=57.1
Q ss_pred CCEEEEEEEEEEe--------------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEe-HHHHH
Q 007275 496 EGQIIACAALFPF--------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT-TRTAD 559 (609)
Q Consensus 496 dg~IVG~~~l~~~--------------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A-~~~G~~~I~l~t-~~a~~ 559 (609)
.+.+||++.=... .++....|+.++|+|+||.||+|..|+..-++.. .+-=.+++.|.+ .+..+
T Consensus 70 ~~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvP 149 (190)
T KOG4144|consen 70 EGTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVP 149 (190)
T ss_pred cccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccc
Confidence 5677887653321 1234578999999999999999999987755544 333345666666 47899
Q ss_pred HHHHCCCeEeeeec
Q 007275 560 WFKSRGFRECSIEM 573 (609)
Q Consensus 560 fYek~GF~~~~~~~ 573 (609)
|||++||+.++...
T Consensus 150 FYEr~gFk~vgp~~ 163 (190)
T KOG4144|consen 150 FYERFGFKAVGPCA 163 (190)
T ss_pred hhHhcCceeecccc
Confidence 99999999998754
|
|
| >COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00085 Score=70.13 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=70.0
Q ss_pred CeEEEEEECCEEEEEEEEEEe--c-CC---CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHH
Q 007275 488 DSFYVVEREGQIIACAALFPF--F-KE---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 561 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~--~-~~---~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fY 561 (609)
..++|++.|.++++-....|+ + .+ +++.|..+++.|+|||+|.-++||...++..++.|+...+|.. -+.+||
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P-~s~~iY 117 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP-FSGGIY 117 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc-CchhhH
Confidence 578999999999988776652 1 12 4578999999999999999999999999999999998887754 578999
Q ss_pred HHCCCeEeee
Q 007275 562 KSRGFRECSI 571 (609)
Q Consensus 562 ek~GF~~~~~ 571 (609)
+|+||+....
T Consensus 118 rKfGye~asn 127 (389)
T COG4552 118 RKFGYEYASN 127 (389)
T ss_pred hhccccccce
Confidence 9999997754
|
|
| >KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0074 Score=63.77 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=55.9
Q ss_pred CCCeEEEcCC-c-cCCCCcEE---EecHHHHHHHHHHHcCCCEEEEEeccccc-------CCCCccccccCHHHHHHHHH
Q 007275 250 GGCLVILSNL-G-YSSSGEVL---NCNTYEVATACALAIEADKLICIIDGPIL-------DESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 250 ~G~IPVi~~~-~-~~~~ge~~---~id~D~lAa~lA~~L~Ad~LIiLTDvdgv-------~~~~~lI~~it~~e~~~l~~ 317 (609)
.+.|||+.+. | ..++|-+. -+-+|..|+.+|.+|++|.+=+--||||+ +|.+++++.+|.+|+.+|.-
T Consensus 258 en~VPVvTGf~Gk~~~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaY 337 (559)
T KOG0456|consen 258 ENAVPVVTGFLGKGWPTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELAY 337 (559)
T ss_pred CCccceEeeccccCccccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHHh
Confidence 4789999974 4 33444333 34579999999999999999999999988 36799999999999988864
Q ss_pred hh
Q 007275 318 QR 319 (609)
Q Consensus 318 ~~ 319 (609)
-|
T Consensus 338 fG 339 (559)
T KOG0456|consen 338 FG 339 (559)
T ss_pred hh
Confidence 44
|
|
| >PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0069 Score=58.97 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=76.9
Q ss_pred cCCHHHHHHHHhhhHhh--ccCcc----CCHHHHHhhcCeEEEEEECCEEEEEEEEEEecC-------------------
Q 007275 456 VTDLSGIKQIIQPLVES--GALVR----RTDEELLKALDSFYVVEREGQIIACAALFPFFK------------------- 510 (609)
Q Consensus 456 ~~D~~~I~~L~~~~~~~--~~~~~----~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~------------------- 510 (609)
.++++++.++....+.. ++..+ ...++|...-..|++...+|+++||+.+.|...
T Consensus 7 ~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~ 86 (182)
T PF00765_consen 7 RRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPR 86 (182)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---S
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCC
Confidence 34455666666554333 23221 223344443345666677899999999987211
Q ss_pred -CCeEEEEEEEEcccCcC------CcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEee
Q 007275 511 -EKCGEVAAIGVSPECRG------QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 570 (609)
Q Consensus 511 -~~~~eI~~iaV~p~~Rg------qGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~ 570 (609)
...+|+.+++|+|+.++ .-+...|+..+.++|.++|++.+...+ ....++|.+.||....
T Consensus 87 ~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~~~~r~l~r~G~~~~~ 154 (182)
T PF00765_consen 87 SPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDPAMERILRRAGWPVRR 154 (182)
T ss_dssp STTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEHHHHHHHHHCT-EEEE
T ss_pred CCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEEChHHHHHHHHcCCceEE
Confidence 36799999999998532 247789999999999999999988877 4778999999998753
|
Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A. |
| >COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0016 Score=54.31 Aligned_cols=44 Identities=32% Similarity=0.524 Sum_probs=40.2
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCC
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGF 566 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF 566 (609)
++|+|+|||+|+|++|++.++++++..|+. ....+..+|+++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce----ehHHHHHHHHhcCC
Confidence 999999999999999999999999998876 33578899999999
|
|
| >PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.011 Score=62.66 Aligned_cols=145 Identities=17% Similarity=0.231 Sum_probs=73.7
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc------------------CeEEEEEE--CCEEEEEEEEEE--
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------------------DSFYVVER--EGQIIACAALFP-- 507 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i------------------~~~~V~~~--dg~IVG~~~l~~-- 507 (609)
.|||++.+|+++|.+|-...-..-...|.+.+.+.+.+ ..++|.|+ .|+|+|++++..
T Consensus 3 viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a~v 82 (342)
T PF04958_consen 3 VIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEAAV 82 (342)
T ss_dssp EEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEESST
T ss_pred EEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEecc
Confidence 58999999999999995543221122344444333322 13567775 599999999842
Q ss_pred ---------------------------------ecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHH---HCCCCEEE
Q 007275 508 ---------------------------------FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDMLF 551 (609)
Q Consensus 508 ---------------------------------~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~---~~G~~~I~ 551 (609)
.+-.++.+|+.++++|+||+-|.|+.|-+.-.=+.. ++--+++.
T Consensus 83 G~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~vi 162 (342)
T PF04958_consen 83 GLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADRVI 162 (342)
T ss_dssp TSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SEEE
T ss_pred CCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchhee
Confidence 011356789999999999999999988775544443 34556776
Q ss_pred EEe------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 552 LLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 552 l~t------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
..- ...-+||+..|=+..+.+. ...+. -..-.++-|+..|.|.
T Consensus 163 AElrG~~De~G~SPFWdalG~~FF~mdF-~eAD~---Lsg~~~k~FIaeLMP~ 211 (342)
T PF04958_consen 163 AELRGVSDEDGRSPFWDALGRHFFDMDF-QEADY---LSGIGNKQFIAELMPR 211 (342)
T ss_dssp EE--B---TT---HHHHHTGGGTS---H-HHHHH---HHHH------------
T ss_pred eeccCCcCCCCCCchHHHhhccccCCCH-HHHHH---HHcCCcchHHHHhCCC
Confidence 654 2457899998876655542 21111 1122466777777664
|
This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A. |
| >TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0098 Score=60.56 Aligned_cols=120 Identities=16% Similarity=0.117 Sum_probs=79.9
Q ss_pred ccccCCc-CCHHHHHHHHhhhHhh--ccCcc------CCHHHHHhhcCeEEEEEE-CCEEEEEEEEEEec----------
Q 007275 450 GTRTAKV-TDLSGIKQIIQPLVES--GALVR------RTDEELLKALDSFYVVER-EGQIIACAALFPFF---------- 509 (609)
Q Consensus 450 ~IR~a~~-~D~~~I~~L~~~~~~~--~~~~~------~~~e~l~~~i~~~~V~~~-dg~IVG~~~l~~~~---------- 509 (609)
.++.+.. +++.++.++..+.... ++..+ ...+++......+++.+. ++++|||+.+.+..
T Consensus 9 ~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~ 88 (241)
T TIGR03694 9 EIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPF 88 (241)
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccH
Confidence 3444433 3466777777664332 33311 122333332233444443 58999999997520
Q ss_pred -------------------CCCeEEEEEEEEcccCcCC--------c--------------------HHHHHHHHHHHHH
Q 007275 510 -------------------KEKCGEVAAIGVSPECRGQ--------G--------------------QGDKLLDYIEKKA 542 (609)
Q Consensus 510 -------------------~~~~~eI~~iaV~p~~Rgq--------G--------------------iG~~LL~~l~~~A 542 (609)
....+|+.+++|+|+||++ | +...|+..+.++|
T Consensus 89 e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a 168 (241)
T TIGR03694 89 EKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALS 168 (241)
T ss_pred HHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHH
Confidence 1246899999999999974 2 4577999999999
Q ss_pred HHCCCCEEEEEeH-HHHHHHHHCCCeEe
Q 007275 543 ASLGLDMLFLLTT-RTADWFKSRGFREC 569 (609)
Q Consensus 543 ~~~G~~~I~l~t~-~a~~fYek~GF~~~ 569 (609)
.++|++.++..++ ...+++.+.||...
T Consensus 169 ~~~Gi~~~~~v~~~~l~r~l~r~G~~~~ 196 (241)
T TIGR03694 169 SANGITHWYAIMEPRLARLLSRFGIQFR 196 (241)
T ss_pred HHCCCcEEEEEeCHHHHHHHHHhCCceE
Confidence 9999999988885 56789999998764
|
Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production. |
| >PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0089 Score=50.99 Aligned_cols=71 Identities=23% Similarity=0.265 Sum_probs=59.5
Q ss_pred EECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEe
Q 007275 494 EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 569 (609)
Q Consensus 494 ~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~ 569 (609)
..+|++|..+... ..+++..-++.|+|||||+.+.++....+++.+.|+.. +..+ ..++++..++||...
T Consensus 5 gpeG~PVSW~lmd-----qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~-Y~hv~~~N~~~~r~~~~lg~~~~ 78 (89)
T PF08444_consen 5 GPEGNPVSWSLMD-----QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPF-YGHVDEDNEASQRLSKSLGFIFM 78 (89)
T ss_pred CCCCCEeEEEEec-----ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCe-EeehHhccHHHHHHHHHCCCeec
Confidence 3467888776654 56899999999999999999999999999999999864 5555 368999999999975
Q ss_pred e
Q 007275 570 S 570 (609)
Q Consensus 570 ~ 570 (609)
.
T Consensus 79 p 79 (89)
T PF08444_consen 79 P 79 (89)
T ss_pred C
Confidence 4
|
3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ]. |
| >PRK13834 putative autoinducer synthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.037 Score=55.03 Aligned_cols=112 Identities=14% Similarity=0.170 Sum_probs=75.2
Q ss_pred CHHHHHHHHhhhHhh--ccCcc----CCHHHHHhhcCeEEEEE-ECCEEEEEEEEEEec--------------------C
Q 007275 458 DLSGIKQIIQPLVES--GALVR----RTDEELLKALDSFYVVE-REGQIIACAALFPFF--------------------K 510 (609)
Q Consensus 458 D~~~I~~L~~~~~~~--~~~~~----~~~e~l~~~i~~~~V~~-~dg~IVG~~~l~~~~--------------------~ 510 (609)
+++++.++..+.+.. ++..+ ...++|...-..+++.. .+|+++||+.+.|.. .
T Consensus 17 ~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~ 96 (207)
T PRK13834 17 LLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAH 96 (207)
T ss_pred HHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCC
Confidence 345555555553332 22221 12233433334455544 568999999996521 1
Q ss_pred CCeEEEEEEEEcccCcCC---c----HHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEe
Q 007275 511 EKCGEVAAIGVSPECRGQ---G----QGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFREC 569 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~Rgq---G----iG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~ 569 (609)
...+|+.+++|+|+++.. + +...|+..+.+++...|++.++..++ ...+.|.++||...
T Consensus 97 ~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~ 163 (207)
T PRK13834 97 PAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILARAGWPMQ 163 (207)
T ss_pred CCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 357899999999986422 2 56789999999999999999988775 56789999999864
|
|
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.069 Score=48.29 Aligned_cols=64 Identities=23% Similarity=0.126 Sum_probs=54.1
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t 554 (609)
.++++..+|++||+..... .++..+.....++|+|+..+.|..|+..++++|.+.|++.+-+..
T Consensus 72 ~l~~~~~~g~~va~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 72 RLFVLYDGGEPVAFALGFR--HGGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred EEEEEEECCEEEEEEEEEE--ECCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 4677788999999987763 345777778888999999999999999999999999998887654
|
|
| >TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.027 Score=59.40 Aligned_cols=145 Identities=12% Similarity=0.162 Sum_probs=88.2
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc-----------------CeEEEEEE--CCEEEEEEEEEEe---
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALFPF--- 508 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i-----------------~~~~V~~~--dg~IVG~~~l~~~--- 508 (609)
|||++..|+++|.++-...-..-...|.+++.+.+.+ ..++|.|+ .|+|+|++++...
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 7999999999999984332111122333433333222 23567774 5899999998420
Q ss_pred --------------------------------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH---HHCCCCEEEEE
Q 007275 509 --------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFLL 553 (609)
Q Consensus 509 --------------------------------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A---~~~G~~~I~l~ 553 (609)
+-.++-+|+.++++|+||+-|.|+.|-+.=.-+. +++--+++...
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFiA~~~erF~~~viAE 161 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIVE 161 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhheee
Confidence 0124568999999999999999988766443333 33444555554
Q ss_pred e------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCCC
Q 007275 554 T------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDT 599 (609)
Q Consensus 554 t------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~~ 599 (609)
- ...-+||+..|=.-.+.+. ...+ |-..-.++.|+..|.|.+
T Consensus 162 mrG~~De~G~SPFWd~lg~hFF~mdF-~eAD---~Lsg~~~k~FIaeLMP~~ 209 (336)
T TIGR03245 162 IQGVQDDNGDSPFWDAIGRHFFDLDF-ATAE---YYSGIKSKTFIAELMPPY 209 (336)
T ss_pred ccCccCCCCCCccHHHhhccccCCCH-HHHH---HHhcCCCceeHHHHCCCC
Confidence 4 2345788888877665542 2211 222235677777777654
|
In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit. |
| >TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.032 Score=58.82 Aligned_cols=145 Identities=15% Similarity=0.168 Sum_probs=88.3
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----------------CeEEEEEE--CCEEEEEEEEEEe----
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF---- 508 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----------------~~~~V~~~--dg~IVG~~~l~~~---- 508 (609)
|||++.+|+++|.+|-...-..-...|.+++.+.+.+ ..++|.|+ .|+|+|++++...
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 7999999999999984432111012333333332222 23567774 5899999998420
Q ss_pred -------------------------------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH---HHCCCCEEEEEe
Q 007275 509 -------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFLLT 554 (609)
Q Consensus 509 -------------------------------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A---~~~G~~~I~l~t 554 (609)
+-.++-+|+.++++|+||+-|.|+.|-+.=.-+. +++--+++...-
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEm 161 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKIIAEM 161 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHHHhhHhhhhhhheeec
Confidence 0024568999999999999999988866543333 334445555543
Q ss_pred ------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCCC
Q 007275 555 ------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDT 599 (609)
Q Consensus 555 ------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~~ 599 (609)
...-+||+..|-.-.+.+. ...+ |-..-.++.|+..|.|.+
T Consensus 162 rG~~De~G~SPFWd~lg~hFF~mdF-~~AD---~Lsg~~~k~FIaeLMP~~ 208 (335)
T TIGR03243 162 RGVSDEQGRSPFWEALGRHFFSMDF-AQAD---YLSGIGSKTFIAELMPKY 208 (335)
T ss_pred cCccCCCCCCccHHHhhccccCCCH-HHHH---HHhcCCCceeHHHHCCCC
Confidence 2345799888877665552 2211 222335677777777654
|
In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). |
| >COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.029 Score=59.14 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=67.6
Q ss_pred CHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEe--cCCCeEEEEEEEEcccCcC-CcHHHHH
Q 007275 458 DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF--FKEKCGEVAAIGVSPECRG-QGQGDKL 534 (609)
Q Consensus 458 D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~--~~~~~~eI~~iaV~p~~Rg-qGiG~~L 534 (609)
|++.+..++++..............+...+...+|. |..-|.+.+.+. .+++..|++.++|.++.|| -||++.+
T Consensus 346 dl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iVs---gdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~v 422 (495)
T COG5630 346 DLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIVS---GDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDAV 422 (495)
T ss_pred CcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEee---ccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHHH
Confidence 577889998877665543322222222333444554 456777777754 3457789999999999999 8999999
Q ss_pred HHHHHHHHHHCCCCEEEEEeHHHHHHH--HHCCCeE
Q 007275 535 LDYIEKKAASLGLDMLFLLTTRTADWF--KSRGFRE 568 (609)
Q Consensus 535 L~~l~~~A~~~G~~~I~l~t~~a~~fY--ek~GF~~ 568 (609)
+.-+.+..-++=+.+.. .++++.+|| +.-|+-.
T Consensus 423 fniM~e~fP~eL~WRSR-~~N~vNkwYf~rSvg~lk 457 (495)
T COG5630 423 FNIMREEFPNELFWRSR-HNNQVNKWYFARSVGYLK 457 (495)
T ss_pred HHHHHHhCcHhhhhhhc-ccCcchheeeehhhehhh
Confidence 99888776432121211 124677777 3335443
|
|
| >PRK10456 arginine succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.036 Score=58.69 Aligned_cols=146 Identities=16% Similarity=0.167 Sum_probs=88.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----------------CeEEEEEE--CCEEEEEEEEEEe--
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF-- 508 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----------------~~~~V~~~--dg~IVG~~~l~~~-- 508 (609)
..|||++.+|+++|.+|-...-..-...|.+++.+.+.+ ..++|.++ .|+|+|++++...
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG 81 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVG 81 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 359999999999999994332111122444444444333 23567774 5899999998420
Q ss_pred ---------------------------------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH---HHCCCCEEEE
Q 007275 509 ---------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFL 552 (609)
Q Consensus 509 ---------------------------------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A---~~~G~~~I~l 552 (609)
+-.+.-+|+.++++|+||+-|.|+.|-+.=.-+. +++--+++..
T Consensus 82 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viA 161 (344)
T PRK10456 82 LNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVA 161 (344)
T ss_pred CCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhhhe
Confidence 0024568999999999999999988766433333 2333445544
Q ss_pred Ee------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 553 LT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 553 ~t------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
.- ...-+||+..|=.-.+.+. ...+ |-..-.++.|+..|.|.
T Consensus 162 EmRG~~De~G~SPFWd~lg~hFF~mdF-~eAD---~Lsg~~~k~FIaeLMP~ 209 (344)
T PRK10456 162 EMRGVIDEHGYSPFWQSLGKRFFSMDF-SRAD---YLCGTGQKAFIAELMPK 209 (344)
T ss_pred eccCccCCCCCCccHHHhhccccCCCH-HHHH---HHhcCCCceeHHHHCCC
Confidence 33 2345788887766655442 2111 11223466777766664
|
|
| >KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.12 Score=47.88 Aligned_cols=122 Identities=20% Similarity=0.147 Sum_probs=76.7
Q ss_pred cccCCcCCHHHHHHHHhhhHhhc--cCccCCHH-HH--Hh-hc-----CeEEEEEE---------CCEEEEEEEEEEecC
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESG--ALVRRTDE-EL--LK-AL-----DSFYVVER---------EGQIIACAALFPFFK 510 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~--~~~~~~~e-~l--~~-~i-----~~~~V~~~---------dg~IVG~~~l~~~~~ 510 (609)
+-|.++.+.+....|....+-.. ...+.+.+ .+ +. |- -.|+|.+. -+..||-+-++-..+
T Consensus 16 LVPYe~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt~~ 95 (185)
T KOG4135|consen 16 LVPYEPCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLTTS 95 (185)
T ss_pred EeeccccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceeeEEecC
Confidence 56667777777777765432221 12233321 11 11 11 13555521 123577776653222
Q ss_pred C---------CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 511 E---------KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 ~---------~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
. ..+++.-+.-.|..||+|+|++.+..++.|+.. .++.+-.+.. .++.+||.|++|..+...
T Consensus 96 ~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~n 171 (185)
T KOG4135|consen 96 PDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFYN 171 (185)
T ss_pred CCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeeee
Confidence 1 246776666689999999999999999999975 5676666655 389999999999987543
|
|
| >TIGR03244 arg_catab_AstA arginine N-succinyltransferase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.045 Score=57.85 Aligned_cols=144 Identities=15% Similarity=0.177 Sum_probs=84.7
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----------------CeEEEEEE--CCEEEEEEEEEEe----
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF---- 508 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----------------~~~~V~~~--dg~IVG~~~l~~~---- 508 (609)
|||++.+|+++|.+|-...-..-...|.+++.+.+.+ ..++|.|+ .|+|+|++++...
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 7999999999999984432111122444444444333 23567765 5899999998420
Q ss_pred -------------------------------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH---HHCCCCEEEEEe
Q 007275 509 -------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFLLT 554 (609)
Q Consensus 509 -------------------------------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A---~~~G~~~I~l~t 554 (609)
+-.++-+|+.++++|+||+-|.|+.|-+.=.-+. +++--+++...-
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEm 161 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERFSKKIIAEM 161 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHHHHHHhhHhhhhhhhhhhh
Confidence 0024568999999999999999988766433332 233333444432
Q ss_pred ------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 555 ------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 555 ------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
...-+||+..|=.-.+.+. ...+ |-..-.++.|+..|.|.
T Consensus 162 rG~~De~G~SPFWd~lg~hFF~mdF-~eAD---~Lsg~~~k~FIaeLMP~ 207 (336)
T TIGR03244 162 RGVSDEQGRSPFWNALGRHFFSMDF-SQAD---YLSGIGQKAFIAELMPK 207 (336)
T ss_pred cCccCCCCCCchHHHhhccccCCCH-HHHH---HHhccCcchhHHHHCCC
Confidence 1335688887766555442 2111 11123455666666554
|
In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST). |
| >COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.14 Score=50.30 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=79.8
Q ss_pred cCCHHHHHHHHhhhHhh--ccCc----cCCHHHHHhhcCeEEEE-EECCEEEEEEEEEEecC------------------
Q 007275 456 VTDLSGIKQIIQPLVES--GALV----RRTDEELLKALDSFYVV-EREGQIIACAALFPFFK------------------ 510 (609)
Q Consensus 456 ~~D~~~I~~L~~~~~~~--~~~~----~~~~e~l~~~i~~~~V~-~~dg~IVG~~~l~~~~~------------------ 510 (609)
++-++++.++..+.+.+ ++.. .+..++|.+.-..|.++ ..+++|+||+.+.|...
T Consensus 14 ~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P 93 (209)
T COG3916 14 PKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPP 93 (209)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCC
Confidence 33455666666664433 2221 23344454444556666 67899999999976211
Q ss_pred --CCeEEEEEEEEcc--cCcCC---c-HHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEee
Q 007275 511 --EKCGEVAAIGVSP--ECRGQ---G-QGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECS 570 (609)
Q Consensus 511 --~~~~eI~~iaV~p--~~Rgq---G-iG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~ 570 (609)
.+.+|..+++|++ .-+.. . ++..|+--+.+++.+.|++.|...|+ ...+.+.+.||....
T Consensus 94 ~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~~meril~r~Gw~~~r 162 (209)
T COG3916 94 SSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDTGMERILRRAGWPLTR 162 (209)
T ss_pred CCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceEEEEEchHHHHHHHHcCCCeEE
Confidence 2678999999986 32222 2 47889999999999999999988884 678999999998764
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.035 Score=60.57 Aligned_cols=125 Identities=16% Similarity=0.200 Sum_probs=94.9
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccC-ccCCHHHHHhhc--CeEEEE--E-----ECCEEEEEEEEEEecCCCeEE
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL--DSFYVV--E-----REGQIIACAALFPFFKEKCGE 515 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i--~~~~V~--~-----~dg~IVG~~~l~~~~~~~~~e 515 (609)
.|..++++..+.+++.|.+|.+...+.... .+..++++.+.. ..+.+. . -|.-+||.+.+. -++..+.
T Consensus 411 em~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~--kk~~~w~ 488 (574)
T COG3882 411 EMRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVE--KKESEWF 488 (574)
T ss_pred eEEEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEE--ecCCeEE
Confidence 466678999999999999998776555443 334566666633 333332 1 145689988886 3457888
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH------HHHHHHHHCCCeEeeee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSIE 572 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~------~a~~fYek~GF~~~~~~ 572 (609)
|+.+..+...-|+++=.+||..+++.|...|+..++..-. +...||+++||+..+..
T Consensus 489 IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~en 551 (574)
T COG3882 489 IDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKGEN 551 (574)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhcccccccc
Confidence 9888888888899999999999999999999999888652 56899999999966544
|
|
| >COG5628 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.098 Score=46.78 Aligned_cols=78 Identities=15% Similarity=0.117 Sum_probs=57.4
Q ss_pred CeEEEEEECCEEEEEEEEEEec---CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHH
Q 007275 488 DSFYVVEREGQIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFK 562 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~---~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYe 562 (609)
..-|....+|.+|||+.+.... .....-++.++|-..|||+|.|++..+.+...+ +|...+.... ++|+.||.
T Consensus 37 ~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~--~g~w~Va~i~EN~PA~~fwK 114 (143)
T COG5628 37 REAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSA--WGVWQVATVRENTPARAFWK 114 (143)
T ss_pred cceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHh--hceEEEEEeccCChhHHHHH
Confidence 4567778899999999886422 123456888999999999999999999887654 4444433322 58999999
Q ss_pred HCCCe
Q 007275 563 SRGFR 567 (609)
Q Consensus 563 k~GF~ 567 (609)
+.-+.
T Consensus 115 ~~~~t 119 (143)
T COG5628 115 RVAET 119 (143)
T ss_pred hhhcc
Confidence 86554
|
|
| >PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.17 Score=49.07 Aligned_cols=80 Identities=19% Similarity=0.261 Sum_probs=53.4
Q ss_pred EEEEE-CCEEEEEEEEEEec------CCCeEEEEEEEEcccCcCCcHHHHHHHHHH-HHHHHCCCCEEEEEeHHHHHHHH
Q 007275 491 YVVER-EGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIE-KKAASLGLDMLFLLTTRTADWFK 562 (609)
Q Consensus 491 ~V~~~-dg~IVG~~~l~~~~------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~-~~A~~~G~~~I~l~t~~a~~fYe 562 (609)
+++.+ ..++|+.+.+..+. +.....++...++|+|||+|+++ |+..+. +..+..+-..+...+..+.+||.
T Consensus 49 ~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~k-l~~~~~~~~~~~~~~N~~~~~~~~~~~~w~ 127 (181)
T PF06852_consen 49 LTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMK-LQDDICMDELDSVDDNSVAQGNVKMSNFWH 127 (181)
T ss_pred EEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHH-HHHHHHHHHhccCCCceeeecCHHHHHHHH
Confidence 34444 46799988876432 23578899999999999999996 555554 44444333334333457778887
Q ss_pred H-CCCeEeee
Q 007275 563 S-RGFRECSI 571 (609)
Q Consensus 563 k-~GF~~~~~ 571 (609)
+ +||...+.
T Consensus 128 k~~G~~~~~h 137 (181)
T PF06852_consen 128 KMFGFDDYGH 137 (181)
T ss_pred HHhCCCCCcc
Confidence 6 79887765
|
Note that some proteins in the entry contain more than one copy of this region. |
| >COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.067 Score=58.20 Aligned_cols=51 Identities=18% Similarity=0.348 Sum_probs=44.9
Q ss_pred cccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 522 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 522 ~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
...||.+|+|+.||+.+++.|++.+..+|.+.+. .++.+|.|+||...+.-
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~gpY 510 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDGPY 510 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccCCc
Confidence 4689999999999999999999998988887764 78999999999987653
|
|
| >KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.3 Score=55.65 Aligned_cols=84 Identities=18% Similarity=0.278 Sum_probs=59.8
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC-------------CEE------------------------------
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL-------------DML------------------------------ 550 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~-------------~~I------------------------------ 550 (609)
+.|-+|+|+|+|+++|+|++-++.+.+|...+.. +++
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~er~ 694 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSERP 694 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhccCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEcccCC
Confidence 5788999999999999999999999998754321 111
Q ss_pred -----EEEe-----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCCCCCC
Q 007275 551 -----FLLT-----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGI 602 (609)
Q Consensus 551 -----~l~t-----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~~~g~ 602 (609)
|+.+ ....+||.++||.++.....+.. ....++.+|++.|-++.+|.
T Consensus 695 perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~n~-----lTGEHtcimLk~L~~~e~~w 751 (1011)
T KOG2036|consen 695 PERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTSND-----LTGEHTCIMLKTLEGDESGW 751 (1011)
T ss_pred CcccceeeecccCCHHHHHHHHhcCceeEEeeccccc-----cccceeEEEEecCCCcccch
Confidence 0111 24589999999999876544421 13457889998888766654
|
|
| >PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.49 Score=44.83 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=60.0
Q ss_pred CCHHHHHHHHhhhHhhc----cCccCCHHHHHhhcC------e-EEEEE--ECCEEEEEEEEEEec----C--CCeEEEE
Q 007275 457 TDLSGIKQIIQPLVESG----ALVRRTDEELLKALD------S-FYVVE--REGQIIACAALFPFF----K--EKCGEVA 517 (609)
Q Consensus 457 ~D~~~I~~L~~~~~~~~----~~~~~~~e~l~~~i~------~-~~V~~--~dg~IVG~~~l~~~~----~--~~~~eI~ 517 (609)
+++.++..|++..+-+. |....+.+-+...+. . ...+. .++++|||+.-.|.. + -...+|.
T Consensus 35 ~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~irv~~~~~~~~eIN 114 (162)
T PF01233_consen 35 EELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIRVRDKVIKMVEIN 114 (162)
T ss_dssp HHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEEEeeeEeeeeeEE
Confidence 34455666655533222 234455665555542 1 22232 369999999877621 1 2568999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I 550 (609)
-++||++.|.++++--|++.+.+++...|+-+-
T Consensus 115 FLCVhKklRskrlAPvLIkEItRRvn~~gI~qA 147 (162)
T PF01233_consen 115 FLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA 147 (162)
T ss_dssp EEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred EEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence 999999999999999999999999999887653
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A .... |
| >PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.32 Score=47.36 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=37.9
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G 546 (609)
.++||..-.. .......|+||.|.|.||++|+|+.|++..=+.++..+
T Consensus 66 h~vGyFSKEk-~s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 66 HIVGYFSKEK-ESWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEES-S-TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred eeEEEEEEEe-cccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 4888887652 23345789999999999999999999999999888775
|
These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A .... |
| >cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.48 Score=41.49 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=49.0
Q ss_pred EEEEEECCEEEEEEEEEEec-CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHH
Q 007275 490 FYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF 561 (609)
Q Consensus 490 ~~V~~~dg~IVG~~~l~~~~-~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fY 561 (609)
.+-+..++...||+.+.+.. +....+|+.++|.|..|++|+++.|+..+.+.. +.++..+ .+...||
T Consensus 10 ~~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~-----~~L~Wrsr~~n~~n~Wy 80 (99)
T cd04264 10 LHAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF-----PKLFWRSRKTNPINPWY 80 (99)
T ss_pred ceEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcccceE
Confidence 34445566788888887422 247899999999999999999999999888763 4555554 2445665
|
DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.18 Score=52.72 Aligned_cols=49 Identities=18% Similarity=0.306 Sum_probs=42.4
Q ss_pred cCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 524 ECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 524 ~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
.||.||+|..||+.+++.|++ +|..+|-+... .++.+|.|+||+..++.
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~LdGPY 548 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELDGPY 548 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeecChh
Confidence 699999999999999999975 78888877763 68899999999987654
|
|
| >COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.48 Score=48.56 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=54.1
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----------------CeEEEEEE--CCEEEEEEEEEE----
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP---- 507 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----------------~~~~V~~~--dg~IVG~~~l~~---- 507 (609)
.+||++..|++++.++-...-..-...|-+.+.+...+ ..++|.++ .|+++|+.++..
T Consensus 3 vvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vGl 82 (336)
T COG3138 3 VVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVGL 82 (336)
T ss_pred ccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeecc
Confidence 48999999999999984332111111333333333222 24566665 699999998742
Q ss_pred ---e----------------------------cCCCeEEEEEEEEcccCcCCcHHHHHH
Q 007275 508 ---F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLL 535 (609)
Q Consensus 508 ---~----------------------------~~~~~~eI~~iaV~p~~RgqGiG~~LL 535 (609)
+ +-.++.+|+.++++|+||.-+.|+.|-
T Consensus 83 ~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Lls 141 (336)
T COG3138 83 NDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLS 141 (336)
T ss_pred CCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhh
Confidence 0 001345788999999999777776543
|
|
| >PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=91.08 E-value=1.3 Score=43.20 Aligned_cols=117 Identities=16% Similarity=0.196 Sum_probs=78.0
Q ss_pred ccccCCcCCHHHHHHHHhhhHhh-ccCccCCHHHHHhhcC------eEEEEEEC-CEEEEEEEEEEecC-----C--C--
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVERE-GQIIACAALFPFFK-----E--K-- 512 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~i~------~~~V~~~d-g~IVG~~~l~~~~~-----~--~-- 512 (609)
.+|+++++|++++..+++..... ......+.+++..|+. ..||++++ ++|-.|+.++-.+. . .
T Consensus 30 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l 109 (190)
T PF02799_consen 30 GLRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTL 109 (190)
T ss_dssp TEEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEE
T ss_pred ccccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCccce
Confidence 48999999999999999885543 3345678999999982 35777765 58989888874321 1 1
Q ss_pred -eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 513 -CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 513 -~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
.+++ -..+... =--++||..++-.|++.|+...-+.. -....|.+.+.|..-+-
T Consensus 110 ~aAY~-fY~~~~~----~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~fL~~lKFg~GdG 165 (190)
T PF02799_consen 110 KAAYS-FYYVATS----TRLKELMNDALILAKNEGFDVFNALDLMDNSSFLEDLKFGPGDG 165 (190)
T ss_dssp EEEEE-EEEEESS----SHHHHHHHHHHHHHHHTTESEEEEESTTTGGGTTTTTT-EEEEE
T ss_pred eeeee-eeeeecC----CCHHHHHHHHHHHHHHcCCCEEehhhhccchhhHhhCCccCCCC
Confidence 2333 2233222 24677999999999999998876655 24557899999987543
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A .... |
| >cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.74 Score=40.32 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=46.7
Q ss_pred EEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHH
Q 007275 491 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF 561 (609)
Q Consensus 491 ~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fY 561 (609)
+-+..++..=||+.+.+.......+|+.++|.|..||+|+++.|++.+.+.. +.++..+ .+...||
T Consensus 12 ~~~y~~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~~n~Wy 80 (99)
T cd04265 12 HTIYLSEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF-----PKLFWRSRSTNPINPWY 80 (99)
T ss_pred eEEEEeCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcccceE
Confidence 3344455566677666322247899999999999999999999999888763 3455554 2455665
|
This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >PLN03238 probable histone acetyltransferase MYST; Provisional | Back alignment and domain information |
|---|
Probab=90.46 E-value=0.58 Score=48.30 Aligned_cols=49 Identities=16% Similarity=0.191 Sum_probs=39.2
Q ss_pred CEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC
Q 007275 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546 (609)
Q Consensus 497 g~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G 546 (609)
..+|||..--.. ......|+||.|.|.||++|+|+.|++..=+..+..|
T Consensus 140 ~h~vGYFSKEK~-s~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 140 SHIVGYFSKEKV-SAEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred cEEEEEeceecc-ccCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 458998766522 2234679999999999999999999999998887765
|
|
| >PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase | Back alignment and domain information |
|---|
Probab=89.81 E-value=0.33 Score=39.62 Aligned_cols=29 Identities=31% Similarity=0.413 Sum_probs=25.7
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHH
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKA 542 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A 542 (609)
.-|.+|-|+|.+|++||+++||+.+.+..
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 45789999999999999999999988764
|
|
| >PTZ00064 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.05 E-value=0.89 Score=50.17 Aligned_cols=49 Identities=20% Similarity=0.128 Sum_probs=39.1
Q ss_pred CEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC
Q 007275 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546 (609)
Q Consensus 497 g~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G 546 (609)
-.+|||..--.. ......|+||.|.|.||++|+|+.|++..=+..+..|
T Consensus 369 ~HiVGYFSKEK~-S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 369 CHIVGYFSKEKV-SLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred cEEEEEeccccc-CcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 478998765422 2234579999999999999999999999988887765
|
|
| >PLN03239 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.87 E-value=1.3 Score=46.96 Aligned_cols=49 Identities=12% Similarity=0.077 Sum_probs=38.6
Q ss_pred CEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC
Q 007275 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546 (609)
Q Consensus 497 g~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G 546 (609)
-.+|||..--.. ......|+||.|.|.||++|+|+.|++..=+..+..|
T Consensus 198 ~h~vGYFSKEK~-s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 198 FHPVGYYSKEKY-SDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred eEEEEEeeeccc-CCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 458887765421 2234579999999999999999999999988887765
|
|
| >COG3375 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.78 E-value=4.5 Score=40.36 Aligned_cols=103 Identities=14% Similarity=0.101 Sum_probs=66.0
Q ss_pred cCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEE-CCEEEEEEEEEEec-CCC-eEEEEEEEEcccCcCCc
Q 007275 456 VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFPFF-KEK-CGEVAAIGVSPECRGQG 529 (609)
Q Consensus 456 ~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~-dg~IVG~~~l~~~~-~~~-~~eI~~iaV~p~~RgqG 529 (609)
+.++++..+++...+..........+.+.... ...+.+.. |+++||..-=+|-. ..+ ..+-+.++|.|++++.|
T Consensus 11 p~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sg 90 (266)
T COG3375 11 PAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSG 90 (266)
T ss_pred HHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccc
Confidence 44556666665554443332222233333221 33444454 45999987666522 222 45667899999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeHHHH
Q 007275 530 QGDKLLDYIEKKAASLGLDMLFLLTTRTA 558 (609)
Q Consensus 530 iG~~LL~~l~~~A~~~G~~~I~l~t~~a~ 558 (609)
+|-+|=..=.+++.++|+..+..+-.+..
T Consensus 91 lg~aLK~~Qre~a~~~G~tli~WTfDPl~ 119 (266)
T COG3375 91 LGVALKMKQRERALSMGYTLIAWTFDPLN 119 (266)
T ss_pred hhhhhHHHHHHHHHhcCeeeEEEecccch
Confidence 99999888888999999999877654433
|
|
| >KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.65 E-value=5.1 Score=42.51 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=79.8
Q ss_pred cccccCCcCCHHHHHHHHhhh-HhhccCccCCHHHHHhhcC------eEEEEEE-CCEEEEEEEEEEecCC---------
Q 007275 449 EGTRTAKVTDLSGIKQIIQPL-VESGALVRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFKE--------- 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~-~~~~~~~~~~~e~l~~~i~------~~~V~~~-dg~IVG~~~l~~~~~~--------- 511 (609)
..+|+++..|++++.+|+... .+.......+.+++..|+. ..||++. +|+|-+|+.++..+..
T Consensus 261 ~G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~kt 340 (421)
T KOG2779|consen 261 PGLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKT 340 (421)
T ss_pred CCcccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccCCCCcce
Confidence 359999999999999999774 4445566678899998872 3466665 8999999999853321
Q ss_pred -CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEe
Q 007275 512 -KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 569 (609)
Q Consensus 512 -~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~ 569 (609)
..+++ ...|+.+ ---.+||..++-.|+..|+....+.. -....|+.+++|-.-
T Consensus 341 l~aaYl-yY~v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~~fl~~LkFg~G 395 (421)
T KOG2779|consen 341 LQAAYL-YYNVATS----TPLLQLVNDALILAKQKGFDVFNALDLMENESFLKDLKFGPG 395 (421)
T ss_pred eeeeeE-EEeccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhhhHHHhcCcCcC
Confidence 12333 2333322 12456788888888988887654433 256789999999764
|
|
| >PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein | Back alignment and domain information |
|---|
Probab=86.41 E-value=11 Score=34.69 Aligned_cols=60 Identities=20% Similarity=0.183 Sum_probs=46.2
Q ss_pred EEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 007275 491 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552 (609)
Q Consensus 491 ~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l 552 (609)
.-...||++||++.+...+ +..--+ =.+-+|++....+|+-.+=.-+++|++.|++.+++
T Consensus 42 ~~~~~~~kLiav~v~D~l~-~glSaV-Y~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL 101 (128)
T PF04377_consen 42 LEYRLDGKLIAVAVVDILP-DGLSAV-YTFYDPDYSKRSLGTYSILREIELARELGLPYYYL 101 (128)
T ss_pred EEEEeCCeEEEEEEeeccc-chhhhe-eeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence 3334789999998776333 322223 23349999999999999999999999999999988
|
In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation |
| >COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.23 E-value=0.55 Score=50.97 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=46.5
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE-----eH----HHHHHHHHCCCeEe
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-----TT----RTADWFKSRGFREC 569 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~-----t~----~a~~fYek~GF~~~ 569 (609)
..+.|+++.|||+||+-|+|..-+..+.+|..++-+...+-. +. +-.+||++.||+..
T Consensus 240 aaariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 240 AAARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hhhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 346799999999999999999999999999988766554332 21 33579999999965
|
|
| >PRK01305 arginyl-tRNA-protein transferase; Provisional | Back alignment and domain information |
|---|
Probab=85.83 E-value=9.2 Score=38.94 Aligned_cols=80 Identities=18% Similarity=0.217 Sum_probs=56.3
Q ss_pred ccCccCCHHHHHhhc-----C-eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC
Q 007275 473 GALVRRTDEELLKAL-----D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546 (609)
Q Consensus 473 ~~~~~~~~e~l~~~i-----~-~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G 546 (609)
+-+.+.+.+++...+ . .++-...+|++||.+.+...+ +..--| -.+-+|++-..++|+-.+-.-+++|++.|
T Consensus 123 g~m~~~~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~-d~lSAV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~~g 200 (240)
T PRK01305 123 GGMDPPSRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLD-DGLSAV-YTFYDPDEEHRSLGTFAILWQIELAKRLG 200 (240)
T ss_pred CCCCCCCHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccC-CceeeE-EEeeCCCccccCCHHHHHHHHHHHHHHcC
Confidence 333445666666554 2 233334689999998886433 332233 24459999999999999999999999999
Q ss_pred CCEEEEEe
Q 007275 547 LDMLFLLT 554 (609)
Q Consensus 547 ~~~I~l~t 554 (609)
++.+++.-
T Consensus 201 l~y~YLGY 208 (240)
T PRK01305 201 LPYVYLGY 208 (240)
T ss_pred CCeEeeeE
Confidence 99999843
|
|
| >PLN00104 MYST -like histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.65 E-value=0.93 Score=49.80 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=38.7
Q ss_pred CEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC
Q 007275 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546 (609)
Q Consensus 497 g~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G 546 (609)
..+|||..--.. ......|+||.|.|.||++|+|+.|++..=+..+..|
T Consensus 291 ~h~vGyFSKEk~-s~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 291 CHMVGYFSKEKH-SEEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred cEEEEEeccccc-CcCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 479998866522 2233579999999999999999999998888877665
|
|
| >TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated | Back alignment and domain information |
|---|
Probab=84.78 E-value=6.8 Score=41.50 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=59.0
Q ss_pred EEEEE-ECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH----HHHHHHHHC
Q 007275 490 FYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT----RTADWFKSR 564 (609)
Q Consensus 490 ~~V~~-~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~----~a~~fYek~ 564 (609)
++++. .+|+++|.+.+... ++..+....+.+++++..+-+..|+-.++++|.++|++..-+... ...+|-++.
T Consensus 197 l~~a~~~~g~~va~~l~~~~--~~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~ 274 (330)
T TIGR03019 197 VLTVRLGDGVVASAVLSFYF--RDEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNW 274 (330)
T ss_pred EEEEEeCCCCEEEEEEEEEe--CCEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcC
Confidence 45566 68999888766533 233332244667999999999999999999999999998877552 345677788
Q ss_pred CCeEeeee
Q 007275 565 GFRECSIE 572 (609)
Q Consensus 565 GF~~~~~~ 572 (609)
||+.....
T Consensus 275 G~~~~~l~ 282 (330)
T TIGR03019 275 GFEPQPLH 282 (330)
T ss_pred CCeeccce
Confidence 99976543
|
Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members |
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=81.72 E-value=8.2 Score=39.65 Aligned_cols=63 Identities=17% Similarity=0.239 Sum_probs=50.2
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 528 QGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
.+-...|++.+.+.|++.|+.+|++.+. ....+|++.||...+... .|.. ..+.++|-+.+..
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~~i~-------~~f~-g~~~~~~~~~~~~ 83 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEAKIP-------GYFN-GHDAYFMSKYLDE 83 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEEecc-------cccC-CCceEEEEEcCch
Confidence 3458899999999999999999999995 567999999999977652 2332 3578888887764
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch | Back alignment and domain information |
|---|
Probab=81.64 E-value=5.2 Score=36.14 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=33.6
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHH
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS 563 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek 563 (609)
.|-+++|++..|++|+|++|.+++++.- ......+-.+. .....|.+|
T Consensus 48 cvLDFyVhes~QR~G~Gk~LF~~ML~~e-~~~p~~~a~DrPS~Kll~Fl~K 97 (120)
T PF05301_consen 48 CVLDFYVHESRQRRGYGKRLFDHMLQEE-NVSPHQLAIDRPSPKLLSFLKK 97 (120)
T ss_pred eeeeEEEEeceeccCchHHHHHHHHHHc-CCCcccceecCCcHHHHHHHHH
Confidence 4568999999999999999999998752 22233333333 245677766
|
Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.87 E-value=8.2 Score=46.73 Aligned_cols=121 Identities=12% Similarity=0.118 Sum_probs=84.4
Q ss_pred cccC-CcCCHHHHHHHHhhh-HhhccCccCCHHHHHh---hc--CeEEEEEECCEEEEEEEEEEecC-------------
Q 007275 451 TRTA-KVTDLSGIKQIIQPL-VESGALVRRTDEELLK---AL--DSFYVVEREGQIIACAALFPFFK------------- 510 (609)
Q Consensus 451 IR~a-~~~D~~~I~~L~~~~-~~~~~~~~~~~e~l~~---~i--~~~~V~~~dg~IVG~~~l~~~~~------------- 510 (609)
+|.+ +.+|+..+..|..+. ...++..+-....+.. .+ ...|+....+++++...+.+...
T Consensus 31 ~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~~e 110 (989)
T PRK14852 31 IKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYKPE 110 (989)
T ss_pred eeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHHHHHH
Confidence 5665 577788888888774 4456653322211111 11 23466666577777777653211
Q ss_pred --------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHH-CCCeEeee
Q 007275 511 --------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKS-RGFRECSI 571 (609)
Q Consensus 511 --------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek-~GF~~~~~ 571 (609)
...+++.+++++|+.|.+-+=-.|++.+.+++...++..+.+.++ +=..||++ +||+..+.
T Consensus 111 Ld~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig~ 181 (989)
T PRK14852 111 VDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFGE 181 (989)
T ss_pred HHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCccccc
Confidence 146899999999999988877788899988888889999999886 45789997 79998764
|
|
| >PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=80.63 E-value=1.8 Score=37.69 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=34.1
Q ss_pred CeEEEEEECCEEEEEEEEEEec----------------------CCCeEEEEEEEEcccCcCCcHHHHHH
Q 007275 488 DSFYVVEREGQIIACAALFPFF----------------------KEKCGEVAAIGVSPECRGQGQGDKLL 535 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~----------------------~~~~~eI~~iaV~p~~RgqGiG~~LL 535 (609)
..+++.+.+.++||++.+.... ....+||.+++|+|+||+...-..|+
T Consensus 31 ~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 31 VHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred cEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3444544444599999986311 12568999999999999998877775
|
|
| >PHA01733 hypothetical protein | Back alignment and domain information |
|---|
Probab=80.62 E-value=5.4 Score=37.58 Aligned_cols=117 Identities=17% Similarity=0.154 Sum_probs=65.7
Q ss_pred ccccCCcCCHHHHHH-HHhh--hHhhccCccCCHHHHH----hhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 450 GTRTAKVTDLSGIKQ-IIQP--LVESGALVRRTDEELL----KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~-L~~~--~~~~~~~~~~~~e~l~----~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
.|||+|.+|+..+.. +... .+.++... +...+. ..-...+....||+++|.+...+...++.+.+..+..+
T Consensus 4 ~IrpaT~~d~~~l~~n~r~~Dr~E~ealg~--~p~~l~~~~~~s~~~v~~~~~nG~l~aI~Gv~~d~~~~vG~pWlV~T~ 81 (153)
T PHA01733 4 NNRPATQADATEVAQNLRQEDREEIEGLGH--SPLALHLSLDVSENVVAFVAPDGSLAGVAGLVEDMGNRVGEIWMVCTP 81 (153)
T ss_pred ccccccHHHHHHHHccCCHHHHHHHHHhCC--CcccchhhhhccccceEEEecCCcEEEEecccccccCCCCceeEEecH
Confidence 489999999876666 3222 12222211 111222 12234466777899999999986333555666445544
Q ss_pred ccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 523 PECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
.=.+ +-.+.+..+..+.. ...+..++-.+ ..+++|.+.+||+....
T Consensus 82 ~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~ 132 (153)
T PHA01733 82 AIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLRY 132 (153)
T ss_pred HhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeecc
Confidence 3222 22334444444433 33455555444 37899999999997543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 609 | ||||
| 2r98_A | 456 | Crystal Structure Of N-Acetylglutamate Synthase (Se | 2e-34 | ||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 3e-34 | ||
| 3e0k_A | 150 | Crystal Structure Of C-Termianl Domain Of N-Acetylg | 2e-25 | ||
| 2buf_A | 300 | Arginine Feed-Back Inhibitable Acetylglutamate Kina | 6e-14 | ||
| 2bty_A | 282 | Acetylglutamate Kinase From Thermotoga Maritima Com | 2e-12 | ||
| 2rd5_A | 298 | Structural Basis For The Regulation Of N-Acetylglut | 1e-11 | ||
| 2jj4_A | 321 | The Complex Of Pii And Acetylglutamate Kinase From | 4e-11 | ||
| 3zzf_A | 307 | Crystal Structure Of The Amino Acid Kinase Domain F | 9e-11 | ||
| 3zzi_A | 464 | Crystal Structure Of A Tetrameric Acetylglutamate K | 1e-10 | ||
| 3s6k_A | 467 | Crystal Structure Of Xcnags Length = 467 | 1e-09 | ||
| 2ap9_A | 299 | Crystal Structure Of Acetylglutamate Kinase From My | 2e-07 | ||
| 3l86_A | 279 | The Crystal Structure Of Smu.665 From Streptococcus | 6e-04 | ||
| 2gan_A | 190 | Crystal Structure Of A Putative Acetyltransferase F | 8e-04 |
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|3E0K|A Chain A, Crystal Structure Of C-Termianl Domain Of N-Acetylglutamate Synthase From Vibrio Parahaemolyticus Length = 150 | Back alignment and structure |
|
| >pdb|2BUF|A Chain A, Arginine Feed-Back Inhibitable Acetylglutamate Kinase Length = 300 | Back alignment and structure |
|
| >pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed With Its Inhibitor Arginine Length = 282 | Back alignment and structure |
|
| >pdb|2RD5|A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana Length = 298 | Back alignment and structure |
|
| >pdb|2JJ4|A Chain A, The Complex Of Pii And Acetylglutamate Kinase From Synechococcus Elongatus Pcc7942 Length = 321 | Back alignment and structure |
|
| >pdb|3ZZF|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From Saccharomyces Cerevisiae Acetylglutamate Kinase Complexed With Its Substrate N-Acetylglutamate Length = 307 | Back alignment and structure |
|
| >pdb|3ZZI|A Chain A, Crystal Structure Of A Tetrameric Acetylglutamate Kinase From Saccharomyces Cerevisiae Length = 464 | Back alignment and structure |
|
| >pdb|3S6K|A Chain A, Crystal Structure Of Xcnags Length = 467 | Back alignment and structure |
|
| >pdb|2AP9|A Chain A, Crystal Structure Of Acetylglutamate Kinase From Mycobacterium Tuberculosis Cdc1551 Length = 299 | Back alignment and structure |
|
| >pdb|3L86|A Chain A, The Crystal Structure Of Smu.665 From Streptococcus Mutans Ua159 Length = 279 | Back alignment and structure |
|
| >pdb|2GAN|A Chain A, Crystal Structure Of A Putative Acetyltransferase From Pyrococcus Horikoshii, Northeast Structural Genomics Target Jr32. Length = 190 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 609 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 4e-81 | |
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 9e-78 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 4e-53 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 2e-29 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 6e-06 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 6e-29 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 3e-05 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 8e-29 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 1e-05 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 2e-28 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 2e-05 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 7e-27 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 3e-05 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 2e-25 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 4e-24 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 3e-04 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 1e-22 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 1e-04 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 3e-22 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 4e-22 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 1e-21 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 9e-21 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 2e-19 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 6e-15 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 6e-14 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 9e-14 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 2e-13 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 3e-13 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 4e-13 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 1e-12 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 1e-12 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 2e-12 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 5e-12 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 2e-11 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 2e-11 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 4e-11 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 4e-11 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 4e-11 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 4e-11 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 6e-11 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 6e-11 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 7e-11 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 9e-11 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 1e-10 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 2e-10 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 3e-10 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 4e-10 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 4e-10 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 5e-10 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 6e-10 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 6e-10 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 7e-10 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 1e-09 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 1e-09 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 2e-09 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 2e-09 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 2e-09 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 3e-09 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 4e-09 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 4e-09 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 5e-09 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 6e-09 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 1e-08 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 1e-08 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 1e-08 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 2e-08 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 2e-08 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 2e-08 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 2e-08 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 2e-08 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 2e-08 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 3e-08 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 3e-08 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 3e-08 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 3e-08 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 4e-08 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 4e-08 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 5e-08 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 6e-08 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 6e-08 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 7e-08 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 7e-08 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 9e-08 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 9e-08 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 1e-07 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 1e-07 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 2e-07 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 2e-07 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 2e-07 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 4e-07 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 5e-07 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 5e-07 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 5e-07 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 7e-07 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 8e-07 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 1e-06 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 1e-06 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 2e-06 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 3e-06 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 4e-06 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 4e-06 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 4e-06 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 5e-06 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 6e-06 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 6e-06 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 8e-06 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 9e-06 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 1e-05 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 3e-05 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 3e-05 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 5e-05 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 5e-05 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 1e-04 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 1e-04 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 1e-04 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 2e-04 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 2e-04 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 4e-04 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 4e-04 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 5e-04 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 6e-04 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 7e-04 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 8e-04 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 4e-81
Identities = 74/193 (38%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 583
+ + G G++LL +I KA +G+ LF L+T T +WF RGF+ S + +PE RRK
Sbjct: 382 QAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYR 441
Query: 584 LS-RNSKYYMKKL 595
+ RNS +++L
Sbjct: 442 SNGRNSHILVRRL 454
|
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 252 bits (647), Expect = 9e-78
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 11/251 (4%)
Query: 69 GNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHH 128
G V + + FV FREA PY+ RG T V I G ++ L+ + DI L
Sbjct: 13 GLVPRGSHMNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQ 72
Query: 129 LGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSP 188
LGIR VL+ G + +D+L + +G Y R+TD SL A + AG +R EA L
Sbjct: 73 LGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAALC- 131
Query: 189 GPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248
+ V + SGNFL A+ GV+DG D G ++K D +R +L
Sbjct: 132 -------GSVSGFA--RAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQL 182
Query: 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFL 307
D G +V + LG+S G+ N + + A + A++++A+KL+ + I G L L
Sbjct: 183 DAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETL 242
Query: 308 TLQEADSLIRQ 318
+ QEA SL
Sbjct: 243 SAQEAQSLAEH 253
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 4e-53
Identities = 52/148 (35%), Positives = 90/148 (60%)
Query: 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP 507
E R A + D+ GI ++I PL E G LVRR+ E+L + + F ++E++G II CAAL+P
Sbjct: 3 AEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYP 62
Query: 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 567
+ +E+ E+A + + P+ R +G LL+Y++ ++ S ++ +F+LTT + WF+ +GF
Sbjct: 63 YSEERKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFY 122
Query: 568 ECSIEMIPEERRKRINLSRNSKYYMKKL 595
E ++ +P ++ N R SK L
Sbjct: 123 EVGVDYLPGAKQGLYNFQRKSKILALDL 150
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 54 ERNLSKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSS 113
+ G ++ + V+ EA PYL G T VV G +
Sbjct: 4 SHHHHHHSSGLVPRGSHMSSEFIEAGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQ 63
Query: 114 PYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
L + +++DI FL +G+R V+V G +I+ L G E ++ R+TD++ M
Sbjct: 64 EELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDAD----TM 119
Query: 173 EAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231
E M++ +++ I + I G + VG G + A+ D G
Sbjct: 120 EVV---EMVLVGRVNKD--IVSRINTTGGRA----VGFCGTDGRLVLARPH---DQEGIG 167
Query: 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 291
GEV V+ + L+ G + ++S++ +G+ N N VA A A+ A+KLI +
Sbjct: 168 FVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILL 227
Query: 292 IDGP-ILDE---SGHLIRFLTLQEADSLIRQ 318
D IL++ LI L + ++ LI Q
Sbjct: 228 TDTRGILEDPKRPESLIPRLNIPQSRELIAQ 258
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449
+GV+ H++DG I LLLE+F G+GTM+ Y
Sbjct: 277 AQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 6e-29
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 21/238 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
E+ P++ RG T VV G ++SP L ++ D+ L +G+R +LV G I++ L
Sbjct: 26 ESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYL 85
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
+ A++ R+TD+ ME M++ K++ + + I G ++
Sbjct: 86 KQLNIPAEFRDGLRVTDAT----TMEIV---SMVLVGKVNKN--LVSLINAAGATA---- 132
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G L A+ + G GEV +VD + +R +D G + +++++ SG+
Sbjct: 133 VGLSGHDGRLLTARPVP--NSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQ 190
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLIRQRV 320
N N VA A A+ A+KLI + D IL+ LI+ + ++ +I
Sbjct: 191 AYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGK 248
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 3e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+GV+ ++DG LL E+ +G GTM+
Sbjct: 265 AQGVKTASIIDGRRQHSLLHEIMSDEGAGTMI 296
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 8e-29
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P+L G VV G ++ L D+AFL + GI V+V G QI +L
Sbjct: 15 EALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAML 74
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
G E + G +R+T E ++ A RM++ ++ + N I HG +
Sbjct: 75 RRLGIEGDFKGGFRVTTPE----VLDVA---RMVLFGQVGRE--LVNLINAHGPYA---- 121
Query: 207 VGVSVASGNFLAAKRKGVV---DGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
VG++ A R+ V D G G+V +V+ M + + G + ++S L +
Sbjct: 122 VGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDA 181
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD---ESGHLIRFLTLQEADSLI 316
G V N N A A A A+ A+KL+ + D + + L+ + L+
Sbjct: 182 DGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLL 238
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
GV H++DG + +L+ELF G GT V
Sbjct: 257 IGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 19/233 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G TFV+ G + ++DI L + GI+ ++V G I +++
Sbjct: 11 EALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMM 70
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
+ G E + +R+TD + ME M++ K++ I + HG +
Sbjct: 71 KDLGIEPVFKNGHRVTDEK----TMEIV---EMVLVGKINKE--IVMNLNLHGGRA---- 117
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+ + A+++ D G G+VKKV+ + ++ + +++ +G G
Sbjct: 118 VGICGKDSKLIVAEKET--KHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGH 175
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
N N A A ++ A+KLI + D +L + G LI LT EA+ LIR
Sbjct: 176 SYNINADTAAAEIAKSLMAEKLILLTDVDGVLKD-GKLISTLTPDEAEELIRD 227
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 246 RGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 7e-27
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G + S L +D+ + +GI V+V G QI LL
Sbjct: 16 EALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLL 75
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
E+ ++ R+TD+ M+ M++ +++ I N I RHG S+
Sbjct: 76 KRLSIESHFIDGMRVTDAA----TMDVV---EMVLGGQVNKD--IVNLINRHGGSA---- 122
Query: 207 VGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
+G++ + AK+ V + +D G GEV V+V + + G + +++
Sbjct: 123 IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIA 182
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLI 316
+G S+GE N N VA A A++A+KL+ + + ++D+ G ++ L+ ++ + LI
Sbjct: 183 PIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELI 242
Query: 317 RQ 318
Sbjct: 243 AD 244
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
+ GV H++DG + +LLE+F G+GT++++
Sbjct: 263 QGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Length = 467 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 28/242 (11%)
Query: 84 VKWFREAWPYL----WAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ +E YL VV + G ++ L+ + ++FL +G+ +++ G
Sbjct: 42 MASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDD-LEALTSSLSFLQEVGLTPIVLHGA 100
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRH 198
Q+D LS G E + + R+T +LA ++EA ++++
Sbjct: 101 GPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVEA----------LQQN 150
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
G + ++ G A+ ++ YG GEVK V++ + L G + ++++
Sbjct: 151 GARA----TSIT---GGVFEAEY---LNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITS 200
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLI 316
LG + SG++LN N A ++ K+I + +LD G LI + L E D L+
Sbjct: 201 LGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLM 260
Query: 317 RQ 318
+Q
Sbjct: 261 QQ 262
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-24
Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 35/267 (13%)
Query: 88 REAWPYLWAHRGGT---FVVI-ISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQI 143
+E YL G F VI + G ++ L + +AFL +G+ V+V G Q+
Sbjct: 43 KEIREYLHRFSGIDQERFAVIKVGGAVIQDD-LPGLASALAFLQTVGLTPVVVHGGGPQL 101
Query: 144 DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR 203
D L + + R+T E++ + + + IR G +
Sbjct: 102 DAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQANLALVDA---------IRDAGGRA- 151
Query: 204 WHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
V G F A +VD G GE + + + + G IL+ LG +
Sbjct: 152 ---AAVP--RGVFEA----DIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETP 202
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLIRQ--- 318
G ++N N A A++ K++ + +LDE G ++ + L + L++
Sbjct: 203 DGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQADWV 262
Query: 319 ------RVKQSEIAANYVKAVAEEDIT 339
++++ + + + + IT
Sbjct: 263 NGGMRLKLEEIKRLLDDLPLSSSVSIT 289
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 23/148 (15%), Positives = 39/148 (26%), Gaps = 33/148 (22%)
Query: 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470
+ + T L ELF G GT++ R ++ +
Sbjct: 276 LLDDLPLSSSVSITRPSELARELFTHAGSGTLI-------RRGERMVATDDKSSL----- 323
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI----------- 519
+ G L + Y + F + AAI
Sbjct: 324 DLGRLDNLVKAAFGRPAVEGYWDRLR--------VDRAFVTESYRAAAITTRLDGWVYLD 375
Query: 520 --GVSPECRGQGQGDKLLDYIEKKAASL 545
V + RG+G G + + + A L
Sbjct: 376 KFAVLDDARGEGLGRTVWNRMVDYAPQL 403
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 84 VKWFREAWPYL----WAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ RE YL + V+ + G I+S L + +AFL+H+G+ +++ GT
Sbjct: 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHGT 87
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
Q++ L +G E Y+ RITD ++A + + + + + G
Sbjct: 88 GPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTA---------LEQLG 138
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ ++ SG F A +D Y G +K V + + G L IL++L
Sbjct: 139 VRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSL 188
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLI 316
++SG++LN N A A E K++ + G I +G I + L +E D L+
Sbjct: 189 AETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248
Query: 317 RQ 318
+Q
Sbjct: 249 KQ 250
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 15/141 (10%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV--ASDLYEGTRTAKVTDLSGIKQIIQPL 469
+ + + L ELF G GTM+ L + + + +++ +Q
Sbjct: 269 DYLPRSSSVAIINVQ-DLQKELFTDSGAGTMIRRGYKLVKRSSIGEFPSADALRKALQRD 327
Query: 470 VES---GALVRRTDEELLKALDSFYVVE--REGQIIACAALFPFFKEKCGEVAAIGVSPE 524
V L + Y E I+ P + S
Sbjct: 328 AGISSGKESVASYLRYLENSDFVSYADEPLEAVAIVKKDTNVPT-------LDKFVCSDA 380
Query: 525 CRGQGQGDKLLDYIEKKAASL 545
D + + + + +L
Sbjct: 381 AWLNNVTDNVFNVLRRDFPAL 401
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} Length = 279 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 3e-22
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 30/239 (12%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLDPILK-----DIAFLHHLGIRFVLVPGTHVQI 143
V+ I G L I G + V+V G I
Sbjct: 26 GGQQMGRGSMKDIIVIKIGGVA------SQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAI 79
Query: 144 DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSS 202
+KL+ E K + R+T + M + + + +R+ G S
Sbjct: 80 NKLMEENQVPVKKINGLRVTSKDD----MVLV---SHALLDLVGKN--LQEKLRQAGVSC 130
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
+ + +AA D YG G+V ++ + E L+ + IL++LGYS
Sbjct: 131 ----QQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYS 183
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
G++LN N +ATA A+A+ ADKLI + + +L+ G ++ +T + I V
Sbjct: 184 KEGDMLNINADYLATAVAVALAADKLILMTNVKGVLEN-GAVLEKITSHQVQEKIDTAV 241
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* Length = 307 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 4e-22
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 84 VKWFREAWPYL---WAHRGGTFVVI-ISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ RE YL + F VI + G I+S L + +AFL+H+G+ +++ GT
Sbjct: 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHGT 87
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
Q++ L +G E Y+ RITD ++A + + + + + + G
Sbjct: 88 GPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKL---------VTALEQLG 138
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ ++ SG F A +D Y G +K V + + G L IL++L
Sbjct: 139 VRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSL 188
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLI 316
++SG++LN N A A E K++ + G I +G I + L +E D L+
Sbjct: 189 AETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248
Query: 317 RQ 318
+Q
Sbjct: 249 KQ 250
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 | Back alignment and structure |
|---|
Score = 91.5 bits (227), Expect = 1e-21
Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Query: 459 LSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGE 515
L +K I P + +V+ + +S +++ + ++I + ++ E
Sbjct: 18 LIDLKNIFSRQLPKMPKEYIVK---LVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAE 74
Query: 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMI 574
VA + V+ + +G G +L++ + ++ L A +FK +GF + M
Sbjct: 75 VAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTK-EHRMP 133
Query: 575 PEERRKRI 582
E+ + I
Sbjct: 134 QEKWKGYI 141
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* Length = 258 | Back alignment and structure |
|---|
Score = 87.1 bits (217), Expect = 2e-19
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 121 KDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL-AAAMEAAGGI 178
+ R V+V G +D+L+ K R+T ++ + AG
Sbjct: 25 SALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTA 84
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+ A ++H ++ VG+ + G+ + + + G G +
Sbjct: 85 NKTLLAW---------AKKHQIAA----VGLFLGDGDSVKVTQLDE----ELGHVGLAQP 127
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-IL 297
+ L+ G L ++S++G + G+++N N + ATA A + A LI + D IL
Sbjct: 128 GSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGA-DLILLSDVSGIL 186
Query: 298 DESGHLIRFLTLQEADSLIRQRV 320
D G I +T +A+ LI Q +
Sbjct: 187 DGKGQRIAEMTAAKAEQLIEQGI 209
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} Length = 163 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 6e-15
Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 452 RTAKVTDLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY---------VVEREGQII 500
+ + + I + E + R D+ L+ ++ Y + I+
Sbjct: 7 IEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIV 66
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD- 559
L + + V R G KLLD + +D ++L T
Sbjct: 67 GTIGLIRL-DNNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFIS 125
Query: 560 ---WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
++ + GFRE +P L ++++Y + L
Sbjct: 126 AQYFYSNNGFREIKRGDLPSSFP---KLDVDNRFYYRNL 161
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} Length = 181 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 6e-14
Identities = 23/154 (14%), Positives = 62/154 (40%), Gaps = 20/154 (12%)
Query: 458 DLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY--------VVEREGQIIACAALFP 507
L+ + +I +E+ ++ +++ + ++++Y + +++ AL
Sbjct: 31 HLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR 90
Query: 508 FFKEKCGEVAAIGVSPECRGQ--GQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----WF 561
+K + P+ RG G KL + A + + L T ++
Sbjct: 91 -IDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFY 149
Query: 562 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
+++GF++ + + + + R+S+ Y+K L
Sbjct: 150 ENQGFKQITRDELDVDYI---FPDRDSRIYVKLL 180
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} Length = 157 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 9e-14
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 19/142 (13%)
Query: 452 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDS--------FYVVEREGQIIA 501
R A + D+S + I + + E D+EL + ++ ++ E QIIA
Sbjct: 5 RKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIA 64
Query: 502 CAAL--------FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 553
AA+ + + G + + P RG G +LD + +A + + L+
Sbjct: 65 TAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLV 124
Query: 554 TTRTADWF-KSRGFRECSIEMI 574
++ K GF++ +
Sbjct: 125 ASKLGRPVYKKYGFQDTDEWLE 146
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 | Back alignment and structure |
|---|
Score = 67.7 bits (165), Expect = 2e-13
Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Query: 459 LSGIKQIIQPLVESGALVRRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCG 514
L G++ + L R E + + + + ++G++I F +
Sbjct: 26 LVGLQNVFS-----HQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFT 80
Query: 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEM 573
E+ V+ + +G G L++++++ + A +FK +GF + I++
Sbjct: 81 EIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSK-DIKV 139
Query: 574 IPEERRKRI 582
I
Sbjct: 140 PKSRYLGYI 148
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} Length = 166 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-13
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 30/165 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVR----------RTDEELLKALDS----FYVVEREG 497
R AK DL + ++ L + ++ + + LD YV E +
Sbjct: 6 RRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDD 65
Query: 498 QIIACAALFPFF-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550
II + + + E R +G ++L+ IE++ G+ +
Sbjct: 66 VIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEI 125
Query: 551 FLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 591
F+ +++ +G E + RK +N + ++
Sbjct: 126 FVEVWDFNKGALEFYNKQGLNEHIHYL-----RKPLNRLEHHHHH 165
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 Length = 172 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 4e-13
Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 27/166 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---------------LKALDSFYVVERE 496
R D + I +E ++E+ + + +
Sbjct: 11 RPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQ 70
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTR 556
G + A+L + + + V P+ G+ G L+D +EK A + G +L + +
Sbjct: 71 GVPVGFASL-----KGPDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASD 125
Query: 557 TA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 601
A ++F RG+ + N M K L D++
Sbjct: 126 NAAEFFAKRGYVAKQRNTVSINGEWLAN------TTMTKSLADSAA 165
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* Length = 164 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 23/162 (14%), Positives = 44/162 (27%), Gaps = 38/162 (23%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL----------VRRTDEELLKALDS----FYVVEREG 497
R A V D + ++ + E+ A+ V E
Sbjct: 4 REATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDER 63
Query: 498 QIIACAALFPFF---------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
+ I ++ + K ++ + V RG G G + + I + +D
Sbjct: 64 EKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVD 123
Query: 549 MLFLLTTRTADW-------FKSRGFRECSIEMIPEERRKRIN 583
+ L D+ + S G R M +
Sbjct: 124 AIELD---VYDFNDRAKAFYHSLGMRCQKQTM-----ELPLL 157
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} Length = 153 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 1e-12
Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 23/144 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------VVEREGQI 499
R + DL + + + + T + + V+E G
Sbjct: 5 RPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAP 64
Query: 500 IACAALFPF---------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550
+A L ++K G + + V P R +G G L++ E + A G+
Sbjct: 65 LAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFA 124
Query: 551 FLLTTRTADWF-KSRGFRECSIEM 573
L T G+ + EM
Sbjct: 125 VLHATEMGQPLYARMGWSPTT-EM 147
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 163 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-12
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549
Y ++ L + + E+ I V + +G G +L+ +KA LG D
Sbjct: 41 CYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADT 99
Query: 550 LFLLTTRTADW----FKSRGFRECSIE 572
+ + T ++ ++ GFR +I+
Sbjct: 100 IEIGTGNSSIHQLSLYQKCGFRIQAID 126
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 5e-12
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549
YV ++ G +I L + K E+ I V+ +G+G G KLL + + A G+
Sbjct: 39 TYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSK 97
Query: 550 LFLLTTRTADW----FKSRGFRECSIE 572
L + T ++ ++ GFR SI+
Sbjct: 98 LEVGTGNSSVSQLALYQKCGFRIFSID 124
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} Length = 150 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-11
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALDS-----FYVVEREGQIIACAAL 505
R A DL G+ ++ Q L S L + + A+ + +V G+ +A A L
Sbjct: 9 RAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATL 68
Query: 506 FPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TR 556
+ + RG+G G ++ + + A + LLT
Sbjct: 69 LIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPA 128
Query: 557 TADWFKSRGFRECSIEM 573
+++S GF +
Sbjct: 129 VHAFYESCGFVQNKTGF 145
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} Length = 162 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 480 DEELLKALDSFYVV--EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDY 537
D L + +G+ + C A+ +E GE+ + + P+ RGQ G+KLL
Sbjct: 40 DLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKRVYIDPQHRGQQLGEKLLAA 98
Query: 538 IEKKAASLGLDMLFLLTTRTADW-----FKSRGFRECSIEMIPEERRKRINLSRNSKYYM 592
+E KA L L T + G++ S +
Sbjct: 99 LEAKARQRDCHTL-RLETGIHQHAAIALYTRNGYQTR-------CAFAPYQPDPLSVFME 150
Query: 593 KKLLPDTSG 601
K L D
Sbjct: 151 KPLFADLRS 159
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A Length = 161 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-11
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKALDSFYVV---EREGQIIACAAL 505
R + +DLS +++ L E+ L ++ + V + G+I+ A+L
Sbjct: 24 RVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASL 83
Query: 506 F--PFFKEKCGEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 560
P F V + V P RG G G L+ + + + S G + L ++ +
Sbjct: 84 MIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLP 143
Query: 561 F-KSRGFRECSIEM 573
F + GFR +M
Sbjct: 144 FYEKLGFRAHERQM 157
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-11
Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 24/151 (15%)
Query: 452 RTAKVTDLSGIKQII---------------QPLVESGALVRRTDEELLKALDSFYVVERE 496
RT + + IKQI + L D Y+ E E
Sbjct: 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 73
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 554
GQ+IA ++ + + V P+ R G +L +EK A ++ +
Sbjct: 74 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHK 133
Query: 555 --TRTADWFKSRGFRECSIEMIPEERRKRIN 583
K G++ ++M K I+
Sbjct: 134 NNLPMISLNKDLGYQVSHVKM-----YKDID 159
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 60.4 bits (146), Expect = 4e-11
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
S V EG+I +F + + V R G G +LL IE A G
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYH--LHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 549 MLFLLTTRTA--DWFKSRGFREC-SIEMIPEERRKRINLSRNSKYYMKKLL 596
++ L + +++K G+RE +E P+ S+++ +K L
Sbjct: 99 LILLDSFSFQAPEFYKKHGYREYGVVEDHPKGH---------SQHFFEKRL 140
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-11
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 475 LVRRTDEELLKALD---------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525
+ + E + AL +F+ ++ C AL GE+ ++ S
Sbjct: 24 MTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELDTR-HGEIKSMRTSASH 82
Query: 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW------FKSRGFREC 569
+G ++L +I ++A G + L L T A + ++S GF+ C
Sbjct: 83 LRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYC 132
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 190 | Back alignment and structure |
|---|
Score = 60.9 bits (147), Expect = 6e-11
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 29/158 (18%)
Query: 430 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 488
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 489 SFYVVEREGQIIACAALF--------------PFFKEKCGEVAAIGVSPECRGQGQGDKL 534
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 535 LDYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFRE 568
L++ K+ SLG D +++T + ++ +GFRE
Sbjct: 128 LEFAVKRLRSLGKDP-YVVTFPNLEAYSYYYMKKGFRE 164
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* Length = 180 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 6e-11
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 462 IKQIIQPLVES-----GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEV 516
Q+ L + G EE++ + +++ P + E+
Sbjct: 14 KDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWEL 73
Query: 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 576
+ V R G +L++Y+EK+ AS G ++L T + + E +
Sbjct: 74 HPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDD--LDHGTTLSQTDLYEHTFD 131
Query: 577 ERRKRINLSRNSKYYMKKL 595
+ NL + + +KL
Sbjct: 132 KVASIQNLREHPYEFYEKL 150
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 162 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 7e-11
Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 452 RTAKVTDLSGIKQIIQPLVE-----------SGALVRRTDEELLKALDSFYVVEREGQII 500
R A +L I Q + + + +E + Y++ E I
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITK-KRLYLLVHEEMIF 62
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TR 556
+ A ++ + SP +G G L +EK+A G ++ T R
Sbjct: 63 SMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHR 122
Query: 557 TADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGI 602
+F+S+GF + E + L S Y K L + S +
Sbjct: 123 MIRFFESKGFTKI------HESLQMNRLDFGSFYLYVKELENQSIV 162
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} Length = 150 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 9e-11
Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 16/139 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTD-EELLKALDS-----FYVVEREGQIIACAAL 505
R +D + Q+ + + G D ++ LK + + ++ +E +II + +
Sbjct: 9 RLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGM 68
Query: 506 FPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-- 559
+ + A + E R +G G +LL E+ + L + L + +
Sbjct: 69 CKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERL 128
Query: 560 ----WFKSRGFRECSIEMI 574
+ G+ +
Sbjct: 129 SAHKLYSDNGYVSNTSGFT 147
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 1e-10
Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 6/123 (4%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFFK 510
RT +D + ++ L + + D+ ++ + F
Sbjct: 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQS 64
Query: 511 E-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTR--TADW--FKSRG 565
+ + + GV P+ R G +L D + G + +T+ G
Sbjct: 65 DPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLG 124
Query: 566 FRE 568
F
Sbjct: 125 FDI 127
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Length = 190 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 2e-10
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 16/157 (10%)
Query: 433 LFKRDGMGTMVASDLYEGT--RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 489
LF + V + L R +D G +++ L G + + + +
Sbjct: 30 LFSPSLISPDVLAVLPADYTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRA 89
Query: 490 -------FYVVEREGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLDY 537
V + EG+I+ +L F G V I V +G+ G +++
Sbjct: 90 RSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRIIQA 149
Query: 538 IEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 573
++ A +G L + + F GF+ +EM
Sbjct: 150 LDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLEM 186
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 406 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 3e-10
Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 18/169 (10%)
Query: 452 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKA---LDSFYVVEREGQII 500
+ + + +++ + ESG +R + + L + E Q+I
Sbjct: 13 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 72
Query: 501 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
+ A++P K G V +G PE G L+ ++ + L
Sbjct: 73 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQW-ISYLF 131
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGII 603
+++ +G+ S ++ + R ++ + +++L D +
Sbjct: 132 PYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVF 180
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A Length = 166 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 4e-10
Identities = 21/130 (16%), Positives = 36/130 (27%), Gaps = 13/130 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 509
+ A L ++ L + ++ + L + + + Q IA F
Sbjct: 25 KPASEASLKDWLELRNKLWSDSEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRF 84
Query: 510 -------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTA 558
G + I V P R G L+ E A +
Sbjct: 85 EYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISH 144
Query: 559 DWFKSRGFRE 568
+S GF+E
Sbjct: 145 AMHRSLGFQE 154
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 Length = 138 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 4e-10
Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 478 RTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
E L +AL Y+ ++ L V + V P + QG G L
Sbjct: 29 HQTEMLEQALSHSLVIYLALDGDAVVGLIRLVGDG-FSSVFVQDLIVLPSYQRQGIGSSL 87
Query: 535 LDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRE 568
+ L T F +S GF
Sbjct: 88 MKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEI 122
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-10
Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAAL 505
R D + + Q + L A +V Q+ +
Sbjct: 11 RLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEV 70
Query: 506 FPFFKEKCGEVAA---IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552
P + IGVSP+ + QG G LL YI+ A G+ L L
Sbjct: 71 HPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSL 120
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 6e-10
Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 20/145 (13%)
Query: 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLKAL-----DSFYVVERE 496
E T + IK++ + + S + EEL ++L F+V E
Sbjct: 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNE 69
Query: 497 -GQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 551
+++ + K + I V RG G G LL E+ A G +
Sbjct: 70 RSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIV 129
Query: 552 LLT--TRTA-DWFKSRGFRECSIEM 573
L A W++ RG++ ++ M
Sbjct: 130 LRVEIDNPAVKWYEERGYKARALIM 154
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 152 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 6e-10
Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 11/109 (10%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
+ + + + V + V RGQG KLL E++A G
Sbjct: 53 NITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCM 110
Query: 549 MLFLLTTRTA--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
++ T ++ GF + ++ ++ + K+
Sbjct: 111 GAYIDTMNPDALRTYERYGFTKI-------GSLGPLSSGQSITWLEKRF 152
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* Length = 170 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-10
Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 481 EELLKALDSFYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 538
+++L+ + + + C + +K + +G R G G K+L+++
Sbjct: 38 KDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHV 97
Query: 539 EKKAASLG-LDMLFL---LTTRTA-DWFKSRGFRECSIEMIPEERRKR--INLSRNSKYY 591
G D ++L ++ +A D+++ GF E +K + +
Sbjct: 98 LNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEI-------IETKKNYYKRIEPADAHV 150
Query: 592 MKKLLPDTSG 601
++K L SG
Sbjct: 151 LQKNLKVPSG 160
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* Length = 150 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 1e-09
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALDS------FYVVEREGQIIACAA 504
D ++ + G LV R + F + Q++AC
Sbjct: 7 ERVNDFDGYNWLPLLAKSSQEGFQLVERMLRNRREESFQEDGEAMFVALSTTNQVLACGG 66
Query: 505 LFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 563
+ + G + + V PE R G G LL+ I +A D L L + + +++
Sbjct: 67 YMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYSEQADPFYQG 125
Query: 564 RGFRECSIEMIP 575
GF+ S E I
Sbjct: 126 LGFQLVSGEKIT 137
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Length = 165 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 1e-09
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 508
R T L + + + L A + +E L + ++ +G I A
Sbjct: 24 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 83
Query: 509 F-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 557
+ I V P R +G +L+ +++ + G + T T +
Sbjct: 84 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTIS 143
Query: 558 ADWFKSRGFRE 568
++ GF E
Sbjct: 144 QKVHQALGFEE 154
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* Length = 177 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEK---CGEVAAIGVSPECRG 527
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 45 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 104
Query: 528 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFREC 569
+G G +L+D +E+ A +L L T ++ + +
Sbjct: 105 RGLGRQLMDEVEQVAVKHKRGLLH-LDTEAGSVAEAFYSALAYTRV 149
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-09
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 19/138 (13%)
Query: 452 RTAKVTDLSGIKQIIQ-----PLVESGALVRRTDEELLKALDS---FYVVEREGQII--A 501
R D ++++++ E+ DE L+ F + + A
Sbjct: 24 RQVLPQDALLVRRVVESTGFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYA 83
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 561
C P E ++ I V+P + G G LL + G +LF T +
Sbjct: 84 CYGPTPA-TEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLF-AETSGIRKY 141
Query: 562 -------KSRGFRECSIE 572
+ GF ++
Sbjct: 142 APTRRFYERAGFSAEAVL 159
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A Length = 160 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 2e-09
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 24/146 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------------VV 493
R + DL + + ++ L G + + +L+K + V
Sbjct: 11 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 70
Query: 494 EREGQIIACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
+R + A + K CG + I V+ + +GQG G L+D + G
Sbjct: 71 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCY 130
Query: 549 MLFLLTTRTADWF-KSRGFRECSIEM 573
+ L F + GF +EM
Sbjct: 131 KIILDCDEKNVKFYEKCGFSNAGVEM 156
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Length = 149 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 3e-09
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS--------FYVVEREGQIIAC 502
R +++D G +++ L +G++ + + + S E G+I A
Sbjct: 8 RKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAAT 67
Query: 503 AAL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 557
++ F K G + + V RG+ G K+++++ S+G + L +
Sbjct: 68 GSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVE 127
Query: 558 ADWF-KSRGFRECSIEM 573
F + G SI+M
Sbjct: 128 NKVFYEKCGMSNKSIQM 144
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* Length = 160 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-09
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E A+ + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA----- 558
+ + + + V+P RG G L+ +E A L ++ A
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 559 DWFKSRGFRECSIE 572
+ G++ +I
Sbjct: 126 LLYTQLGYQPRAIA 139
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} Length = 266 | Back alignment and structure |
|---|
Score = 57.0 bits (137), Expect = 4e-09
Identities = 18/136 (13%), Positives = 35/136 (25%), Gaps = 21/136 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------------DSFYVVERE 496
+D+ IK + G + S YV+
Sbjct: 9 DRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVS 68
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 554
G+ +A + + + + V PE RG G ++ + + L
Sbjct: 69 GRPVATIHME-KLPDGSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRG-KTERLRSAVYS 126
Query: 555 --TRTADWFKSRGFRE 568
+ GF +
Sbjct: 127 WNEPSLRLVHRLGFHQ 142
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} Length = 388 | Back alignment and structure |
|---|
Score = 57.5 bits (138), Expect = 5e-09
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 484 LKALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDY 537
+K Y + + A L PF K K G VA + PE R G +LL +
Sbjct: 41 MKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQH 100
Query: 538 IEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 597
+ G + +L +++ G+ C+ ++ + + + + +K+
Sbjct: 101 SLQTMKKDGYT-VSMLHPFAVSFYRKYGWELCANLLVCHMTKSDLVMKKQVNGTVKRFNK 159
Query: 598 D 598
+
Sbjct: 160 E 160
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} Length = 157 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 6e-09
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 18/140 (12%)
Query: 452 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDS------FYVVEREGQIIAC 502
R A++ DL I + L E L + +KAL ++V +++A
Sbjct: 10 REARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQ 69
Query: 503 AALFP----FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 558
+ + ++ V E R +G + L +YI+ + L
Sbjct: 70 IMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKE 129
Query: 559 -----DWFKSRGFRECSIEM 573
++S EC M
Sbjct: 130 NINAKATYESLNMYECDYNM 149
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-08
Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 20/142 (14%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-----------YVVEREGQII 500
R A DL + ++ V R + + +F V +I+
Sbjct: 8 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 67
Query: 501 ACAALF-----PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 554
+ + + + RGQG G +L+ + ++A G ++ L T
Sbjct: 68 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 127
Query: 555 ---TRTADWFKSRGFRECSIEM 573
+++ GF+ +
Sbjct: 128 KQRPDALRFYEQLGFKASHEGL 149
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Length = 168 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-08
Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 20/148 (13%)
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQ------PLVESGALVRRTDEELLKALDS--- 489
+G + T + ++ + V + + + + L L S
Sbjct: 19 LGGSSMGIIR--TCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTF 76
Query: 490 -FYVVEREGQIIACAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS 544
+ ++ A + K + + VS E R QG L++ ++ +A +
Sbjct: 77 IALAAFDQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANA 136
Query: 545 LGLDMLFLLTTRT----ADWFKSRGFRE 568
LG ++++ + G RE
Sbjct: 137 LGAYVIYVQADYGDDPAVALYTKLGIRE 164
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} Length = 172 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-08
Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 14/131 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAAL 505
R A D + + Q++ +EL L + V+ A L
Sbjct: 26 RRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVL 85
Query: 506 FP----FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 557
++ + + V P RG G LL S G +L + T
Sbjct: 86 SFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDA 145
Query: 558 ADWFKSRGFRE 568
++++RGF
Sbjct: 146 RRFYEARGFTN 156
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} Length = 144 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-08
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 5/104 (4%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKALDS-FYVVEREGQIIACAALFPF 508
R + D + + + E + S F V E G+++
Sbjct: 7 RVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGYD 66
Query: 509 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552
G +GV PE RG+G + LL+ +EKK + G + +
Sbjct: 67 GHR--GSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQI 108
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} Length = 254 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 2e-08
Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEK 540
V Q + + +K E+ GV E + QG G ++ Y+ +
Sbjct: 157 SSYNLDDIERLVAYVNHQPVGIVDII--MTDKTIEIDGFGVLEEFQHQGIGSEIQAYVGR 214
Query: 541 KAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572
A + ++ D + +G+ +
Sbjct: 215 MANERPVILVADGKDTAKDMYLRQGYVYQGFK 246
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} Length = 182 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 17/136 (12%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 28 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 87
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW--- 560
+ + + + V+P RG G L+ +E A L ++ +
Sbjct: 88 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCF--NANAA 145
Query: 561 ----FKSRGFRECSIE 572
+ G++ +I
Sbjct: 146 GLLLYTQLGYQPRAIA 161
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} Length = 228 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 2e-08
Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 26/194 (13%)
Query: 377 NGLWSS----EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL-- 430
+W+S + + L RL+ AAAA G+ + D ++
Sbjct: 10 RPVWNSLGGPQSELDVASG-NLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPE 68
Query: 431 -------LELFKRDGMGTMVASDLYEGT-----RTAKVTDLSGIKQIIQPLVESGALVRR 478
+ + + M+A TD+ + + E G
Sbjct: 69 PVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALAL-ATEPGPWASG 127
Query: 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 538
T FY V +G++ A A EV+ + PE RG+G +L+ +
Sbjct: 128 TWR-----YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLIRKV 182
Query: 539 EKKAASLGLDMLFL 552
A+ G ++ +L
Sbjct: 183 IAGMAARG-EVPYL 195
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Length = 176 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 452 RTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKALDS--FYVVEREGQIIACA 503
RTA + D+ + +++ + R + LL D +++ + +
Sbjct: 27 RTAHIGDVPVLVRLMSEFYQEAGFALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYI 86
Query: 504 ALFPFF-KEKCGEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T 555
L F E G V P RG+G G L +++ LG+ L + T
Sbjct: 87 VLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDH 146
Query: 556 RTADWFKSRGFRE 568
+ GF E
Sbjct: 147 PARGVYSRAGFEE 159
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 Length = 396 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 2e-08
Identities = 22/128 (17%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA---LDSFYVVEREGQIIACAALFPF 508
A ++ + ++E ++ D E+ L++F V+ RE ++ A+ P
Sbjct: 13 TKASQENIQQLGN----ILEQCFVMSFGDSEIYVKGIGLENFRVIYREQKVAGGLAILPM 68
Query: 509 F------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFK 562
+ +AA+G++PE RG G L+ + ++ + + + L ++
Sbjct: 69 GQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVLYPATQR-LYR 127
Query: 563 SRGFRECS 570
G+ +
Sbjct: 128 KAGYEQAG 135
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} Length = 145 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 3e-08
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 8/103 (7%)
Query: 477 RRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
T E L + LD +GQ+I + + V R G G
Sbjct: 34 PPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDG-ILAASIPLLEVQAGWRSLGLGS 92
Query: 533 KLLDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEMI 574
+L+ + + L M+ L F + G + + +
Sbjct: 93 ELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMFL 133
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 3e-08
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 490 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547
+ + E I+ P ++ + G+ RG+G + L +++ A S+G+
Sbjct: 63 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 122
Query: 548 DMLFLLT----TRTADWFKSRGFRECSIEM 573
L L ++ GF+E + M
Sbjct: 123 RKLSLHVFAHNQTARKLYEQTGFQETDVVM 152
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} PDB: 3dr8_A* Length = 174 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 500
R A D + I +I V A + L ++ V E G +
Sbjct: 7 RFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVT 66
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML----F 551
A+ + + G E + + V P +G+G G KLL + +A G ++
Sbjct: 67 GYASFGDW-RSFDGFRYTVEHS-VYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIE 124
Query: 552 LLTTRTADWFKSRGFREC 569
+ S GF
Sbjct: 125 SQNAASIRLHHSLGFTVT 142
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} Length = 187 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 3e-08
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIE 539
+E + K Y+ QII L + + I V + R G G +L+ +
Sbjct: 68 NEYINKPNQIIYIALLHNQIIGFIVLKKNW-NNYAYIEDITVDKKYRTLGVGKRLIAQAK 126
Query: 540 KKAASLGLDMLFLLTTRT---ADWF-KSRGFRECSIEM 573
+ A + + L T A F + GF +
Sbjct: 127 QWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDF 164
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A Length = 184 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 4e-08
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 14/136 (10%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS-----FYVVE--REGQIIACA 503
R DL+ G +++ L E+G + + + + VVE GQI+A A
Sbjct: 42 RPLCTADLNRGFFKVLGQLTETGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATA 101
Query: 504 AL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 558
L F K G V + VS ECRG+ G LL + + L + L
Sbjct: 102 TLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQN 161
Query: 559 DWF-KSRGFRECSIEM 573
F K G+
Sbjct: 162 VGFYKKFGYTVSEENY 177
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 4e-08
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 490 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547
+ + E I+ P ++ + G+ RG+G + L +++ A S+G+
Sbjct: 87 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 146
Query: 548 DMLFLLT----TRTADWFKSRGFRECSIEM 573
L L ++ GF+E + M
Sbjct: 147 RKLSLHVFAHNQTARKLYEQTGFQETDVVM 176
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} Length = 179 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 5e-08
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 29/147 (19%)
Query: 452 RTAKVTDLSGIKQIIQ----PLVESG------ALVRRTDEELLKALDS--FYVVEREGQI 499
R A TD I ++ L ESG L + + ++ + E E
Sbjct: 17 RFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGA 76
Query: 500 IACAALF-------------PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 546
+A A + +K + I VS G +++ + EK +
Sbjct: 77 LAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMS 136
Query: 547 LDMLFLLT----TRTADWFKSRGFREC 569
+ + L + GF+
Sbjct: 137 VPFIRLDCIESNETLNQMYVRYGFQFS 163
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 400 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 6e-08
Identities = 13/117 (11%), Positives = 39/117 (33%), Gaps = 7/117 (5%)
Query: 488 DSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKK 541
Y + Q+ + PF + + + PE RG+G ++ +
Sbjct: 47 TQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLAD 106
Query: 542 AASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598
A + + + L + +++ G+ + + + + + +K++
Sbjct: 107 LAKQKVALSY-LAPFSYPFYRQYGYEQTFEQAEYTIKTEDWPRVKRVPGTIKRVSWA 162
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-08
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 8/115 (6%)
Query: 462 IKQIIQPLVESGALVRRTDEELLKALDS---FYVVEREGQIIACAALFPFFKEKCGEVAA 518
+ + +G + +T E K L + + + ++I + ++
Sbjct: 11 CEDYCALRINAG-MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIGDG-GTVFQIVD 68
Query: 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLD--MLFLLTTRTADWF-KSRGFRECS 570
I V +GQ G ++++I K ++ ++ + L+ AD GF
Sbjct: 69 IAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTE 123
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 Length = 170 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-08
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 29/168 (17%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGAL----------VRRTDEELLKALDSFYVVEREGQII 500
+ + + + + E L VR ++++ +V +G +I
Sbjct: 11 KPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVI 70
Query: 501 ACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---- 554
+ + +G+ P R +G G +L+ A GL + L
Sbjct: 71 GWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADN 130
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY----MKKLLPD 598
R ++ GF E R R +S + Y M + +
Sbjct: 131 ARAIALYEKIGFA--------HEGRARDAVSIDGHYIDSLNMAIIFGN 170
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} Length = 288 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 7e-08
Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKALD--SFYVVEREGQIIACAALFP 507
R A D+ + I ++ E+ + + + + + +F
Sbjct: 23 RYATPDDIEDMVSIFIDAYNFPGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFF 82
Query: 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 567
+ K + +GV + +G G ++ + + + +++ +K F
Sbjct: 83 Y--NKQAWIGLMGVKKAYQRRGIGTEVFRRLLEIGRRKVDTIRLDASSQGYGLYKKFKFV 140
Query: 568 ECS 570
+
Sbjct: 141 DEY 143
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Length = 160 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 9e-08
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEK 540
+ + ++ A A E + I V P+ + +G G LL+++
Sbjct: 33 FGNQGERYLNLKLTADDRMAAFAITQVVLDE--ATLFNIAVDPDFQRRGLGRMLLEHLID 90
Query: 541 KAASLGLDMLFL 552
+ + G+ L+L
Sbjct: 91 ELETRGVVTLWL 102
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} Length = 142 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 9e-08
Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Query: 477 RRTDEELLKALD-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ +A+D S A + + V PE RG+G L+
Sbjct: 32 DIPLALVQRAIDHSLCFGGFVDGRQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALM 91
Query: 536 DYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 568
D + GL L T+ + GF
Sbjct: 92 DAVMAHPDLQGLRRFSLATSDAHGLYARYGFTP 124
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} Length = 181 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 1e-07
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 19/130 (14%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDS-----FYVVEREGQIIACA 503
T+ V +++++ P E R E L + D ++ + I
Sbjct: 11 TTSDVQHYKFMEELLVESFPPEE-----YRELEHLREYTDRIGNFHNNIIFDDDLPIGFI 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 559
+ F ++ V +P R G G + L+++ + + + R +
Sbjct: 66 TYWDF--DEFYYVEHFATNPALRNGGYGKRTLEHLCEFLKRPIVLEVERPVEEMAKRRIN 123
Query: 560 WFKSRGFREC 569
+++ GF
Sbjct: 124 FYQRHGFTLW 133
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 1e-07
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 22/138 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 500
R A V DLSGI +I V + V E + V +G++
Sbjct: 8 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVA 67
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT 555
A+ + + G E + + V + RG G G +L+ + A + +L
Sbjct: 68 GYASYGDW-RAFDGYRHTREHS-VYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIE 125
Query: 556 RTAD----WFKSRGFREC 569
+S GFR
Sbjct: 126 AENTASIRLHESLGFRVV 143
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* Length = 165 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 2e-07
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 433 LFKRDGMGTMVASDLYEG--TRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 489
+F + + S+L + R D S G ++ L G L + E+ +A+ +
Sbjct: 4 IFDASVLAPHIPSNLPDNFKVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRT 63
Query: 490 ------FYVVE--REGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLD 536
V+E +++A A+L F G + V E R Q G LL
Sbjct: 64 SVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLK 123
Query: 537 YIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 573
+ SLG+ + L F GF++ M
Sbjct: 124 TLVSLGKSLGVYKISLECVPELLPFYSQFGFQDDCNFM 161
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 199 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 2e-07
Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 52/192 (27%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL-------------DSFYVVER 495
R+A D I +++ +E L ++E+++ L V E
Sbjct: 5 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH 64
Query: 496 EGQIIACAALFPFFKEKC------------------------------GEVAAIGVSPEC 525
G++ A +P EK + I V
Sbjct: 65 AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERF 124
Query: 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 581
RG G G KLLD + + A + G L L + S+GF++ + I
Sbjct: 125 RGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLYNH 184
Query: 582 I--NLSRNSKYY 591
+ + S ++
Sbjct: 185 MQKEVEGGSHHH 196
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} Length = 169 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 18/165 (10%), Positives = 51/165 (30%), Gaps = 20/165 (12%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDSF----------YVVEREGQII 500
R DL +++ + + L + + + +++
Sbjct: 8 RLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELV 67
Query: 501 ACAALFPFFKEKCGEVAAI-GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL--LTTRT 557
A L A + + + +L+++I + A ++ L + +
Sbjct: 68 ATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNI 127
Query: 558 A--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTS 600
+ +F S GF + E+ +I + ++ ++S
Sbjct: 128 SAKVFFSSIGFENLAF----EKNASKIGNEYFDENWLIYSTTESS 168
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFP------FFKEKCGEVAAIGVSPECRGQGQGDKL 534
+EL F+ + + +I + + E+ I + + G G L
Sbjct: 52 KELSNMSSQFFFIYFDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHL 111
Query: 535 LDYIEKKAASLGLDMLFL 552
L+ + A ++L
Sbjct: 112 LNKAIEIALERNKKNIWL 129
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} Length = 143 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 5e-07
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
A + DL I I ++ + + RR + +V+ + I F +
Sbjct: 6 TKASIDDLDSIVHIDIDVIGNDS--RRNYIKHSIDEGRCVIVKEDNSISGFLTYDTNFFD 63
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-----WFKSRGF 566
C ++ I VSP R +G LL Y+ + + + +T ++ F + GF
Sbjct: 64 -CTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKI----FSSTNESNESMQKVFNANGF 118
Query: 567 RECSI 571
I
Sbjct: 119 IRSGI 123
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} Length = 160 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-07
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 23/151 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKALDS----FYVVEREGQIIA 501
R A D I Q+ L + L R T+E+ K + ++ E +G+++
Sbjct: 8 RKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVG 67
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 557
A+L GE + + V R G G L+ + ++A GL + T T
Sbjct: 68 EASLHK-----DGEFS-LVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPM 121
Query: 558 ADWFKSRGFRECSIEMIPEERRKRINLSRNS 588
+ GF+ + +E + L+
Sbjct: 122 IKIGRKLGFK---MRFYEDEVYGEMRLTERE 149
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} Length = 172 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-07
Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 33/171 (19%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVR------RTDEELLKALDS--------FYVVERE 496
R A+ D + + + + +E+ T EE+ L+ +
Sbjct: 8 REAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLN 67
Query: 497 GQIIACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLL 553
G+I + +++ + I + G G LL+ + A AS L L L
Sbjct: 68 GKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLT 127
Query: 554 T----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY----MKKLL 596
++ GF E ++R K+ M KL+
Sbjct: 128 VQTRNQAAVHLYQKHGFVI-------EGSQERGAYIEEGKFIDVYLMGKLI 171
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* Length = 183 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 7e-07
Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 23/122 (18%)
Query: 452 RTAKVTDLSGIKQI-----------------IQPLVESGALVRRTDEELLKALDS----F 490
R + DL + ++ I+ + + E++++ + F
Sbjct: 30 RKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILF 89
Query: 491 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550
+ +I L E+ + + PE + G LL EK G+
Sbjct: 90 LGAFADSTLIGFIELKI--IANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILEC 147
Query: 551 FL 552
L
Sbjct: 148 RL 149
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 8e-07
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVVERE-GQII 500
R A+ DL + I + S T E+ ++ YV E E G +
Sbjct: 6 RLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVA 65
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547
A + F + EV+ I + CRG+G G LL + A +LG+
Sbjct: 66 AWISFETF-YGRPAYNKTAEVS-IYIDEACRGKGVGSYLLQEALRIAPNLGI 115
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLV---ESGALVRRTDEELLKALDS------FYVVEREGQIIAC 502
A + L + + + + + L K L + + E +++
Sbjct: 4 VQATLEHLDLLAPLFVKYREFYGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGF 63
Query: 503 AALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
L+P F ++ + I V+ E R Q D LL + ++ A + + T
Sbjct: 64 CQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVST 119
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-06
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
S V+ + ++ PF K + E+ +S + +G G L+++++ + +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTS-N 107
Query: 549 MLFLLT---TRTADWFKSRGFRECSIEMIPEERRKRI 582
+ + LT +FK +GF + I + I
Sbjct: 108 IKYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGYI 143
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 477 RRTDEELLKALDSFYVVEREGQIIACAALFP-----FFKEKCGEVAAIGVSPECRGQGQG 531
KA D F+V + +I+ + G + V + +G+G G
Sbjct: 44 NYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIG 103
Query: 532 DKLLDYIEKKAASLG 546
KLL
Sbjct: 104 RKLLITCLDFLGKYN 118
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} Length = 160 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 3e-06
Identities = 16/133 (12%), Positives = 45/133 (33%), Gaps = 18/133 (13%)
Query: 452 RTAKVTDLSGIKQIIQ-----------PLVESGALVRRTDEELLKALDSFYVVEREGQII 500
D + ++ L +VR + +++ + +
Sbjct: 15 APVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPV 74
Query: 501 ACAALFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T 555
+ E + ++ + + + +G+G G + L+ A G+ L+ +
Sbjct: 75 GYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFA--AGLDGVRRLYAVVYGHNP 132
Query: 556 RTADWFKSRGFRE 568
+ +F+++GFR
Sbjct: 133 KAKAFFQAQGFRY 145
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A Length = 172 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVV--EREGQI 499
R A V DL GI I V + D+ +V + G++
Sbjct: 6 RDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEV 65
Query: 500 IACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML---- 550
+ A+ + + G E + + V + RG+G G +LL + ++A + GL ++
Sbjct: 66 LGYASYGDW-RPFEGFRGTVEHS-VYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAI 123
Query: 551 FLLTTRTADWFKSRGFREC 569
+ + GF
Sbjct: 124 ESGNAASIGLHRRLGFEIS 142
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} Length = 168 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 452 RTAKVTDLSGIKQIIQ-PLVES---GALVRRTDEELLKALDSFYVVEREGQII------- 500
R A++ D+ I +I + L E+ V E L + +F+V + ++
Sbjct: 16 RNARMDDIDQIIKINRLTLPENYPYYFFV----EHLKEYGLAFFVAIVDNSVVGYIMPRI 71
Query: 501 ---ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFL 552
+ G V +I V E R +G LL+ K + + ++L
Sbjct: 72 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYL 127
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} Length = 197 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 4e-06
Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 12/102 (11%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAA 504
++D+ + ++ + E V + + F V + + +I+
Sbjct: 38 SPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLD 97
Query: 505 LFPFFKEK----CGEVAAIGVSPECRGQGQGDKLLDYIEKKA 542
+ I V+ + R +G G L+ +
Sbjct: 98 YSSLYPFPSGQHIVTFG-IAVAEKERRKGIGRALVQIFLNEV 138
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* Length = 310 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 5e-06
Identities = 25/233 (10%), Positives = 65/233 (27%), Gaps = 40/233 (17%)
Query: 121 KDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179
+ L G R ++ G Q+ + LL ++ +++ + G I
Sbjct: 33 AYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCV-----AMTQGSIG 87
Query: 180 MMIEAKLSPGPPICNIRRH------------GDSSRWH---EVGVSVASGNFLAAKRKGV 224
+ L+ I++ D + + +G + A + G
Sbjct: 88 YWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGA 147
Query: 225 V----DGVDY----GATGEVKKVDVTRMRERLDGGCLVILSN------LGYSSSGEVLNC 270
+ G + + + + + + + I +G G
Sbjct: 148 IFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVI 207
Query: 271 NTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIRQ 318
+ + A ++AD L+ + + +T+ E + +
Sbjct: 208 DKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQA 260
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* Length = 181 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 6e-06
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYVV-EREGQIIACAALFPFF 509
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 510 ------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 563
+CG V + V + RGQ LLD +E+ + R + S
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYAS 128
Query: 564 RGFR 567
RG+
Sbjct: 129 RGWL 132
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* Length = 339 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 6e-06
Identities = 14/93 (15%), Positives = 25/93 (26%)
Query: 468 PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527
+ +V +VV G+++ L V + V P R
Sbjct: 39 APPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARVDQLLVHPGRRR 98
Query: 528 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 560
+G G L + + A L +
Sbjct: 99 RGIGRALWAHARELARKHDRTTLTATVVESLPS 131
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* Length = 174 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 8e-06
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 23/124 (18%)
Query: 452 RTAKVTDLSGIKQII--------QPLVESGAL----VRRTDEELLKALDS-------FYV 492
R A + DL G+ +++ + +V L E + L + F
Sbjct: 4 RRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVA 63
Query: 493 VEREGQIIACAALFPFFKEKC----GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
G+++ AA P E+ AI V P + +G G L + + G
Sbjct: 64 ESESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYG 123
Query: 549 MLFL 552
+ +
Sbjct: 124 RMLV 127
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} Length = 182 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 9e-06
Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 19/113 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVERE-GQI 499
+ I +I+ + + R+ E + + E GQ+
Sbjct: 14 ECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQL 73
Query: 500 IACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547
+ A+ F + E + + + + RG G L++ + K+A +
Sbjct: 74 LGFASWGSF-RAFPAYKYTVEHS-VYIHKDYRGLGLSKHLMNELIKRAVESEV 124
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-05
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 9/84 (10%)
Query: 491 YVVEREGQIIACAALFPFFKEKCGEVAAIG---VSPECRGQGQGDKLLDYIEKKAASLGL 547
VV + + + V R G G ++ +EK AA G
Sbjct: 45 IVVYDGEKPVGAGRWRMK-----DGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGA 99
Query: 548 DMLFLLT-TRTADWFKSRGFRECS 570
L T+ ++K G+R S
Sbjct: 100 SGFILNAQTQAVPFYKKHGYRVLS 123
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 Length = 312 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 20/113 (17%)
Query: 481 EELLKALDSFYVVERE-GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIE 539
+ L++ S + + G++IA F + + V P+ +G G L +
Sbjct: 203 QALVRFNKSLGICRSDTGELIAWIFQNDF-----SGLGMLQVLPKAERRGLGGLLAAAMS 257
Query: 540 KKAASLGLDMLFLLTTRTADW-------FKSRGFRECS----IEMIPEERRKR 581
++ A L K G+++ I+++P +
Sbjct: 258 REIARGEEITLTAWIV---ATNWRSEALLKRIGYQKDLVNEWIKLVPNSSLEH 307
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 3e-05
Identities = 54/412 (13%), Positives = 97/412 (23%), Gaps = 154/412 (37%)
Query: 268 LNCNTYEVATACALA-IEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIA 326
+C + L+ E D II + F TL + Q+ + +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDH---IIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLR 88
Query: 327 ANY---VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 383
NY + + E S + + E+R +N+ F N
Sbjct: 89 INYKFLMSPIKTEQRQ------------PSMMTRMYIEQRDRLYNDNQVFAKYN------ 130
Query: 384 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ + +L L EL A V + G+
Sbjct: 131 ----VSRLQPYLKLRQALLELRPAKNVL------ID------------------GVL--- 159
Query: 444 ASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS--FYV----VEREG 497
G SG K + V ++ +D F++
Sbjct: 160 ------G---------SG-KTW---VA---LDVCL-SYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 498 QIIA-----CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML-- 550
++ + P + + + + R +L ++ K L +L
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRS----DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 551 ---------F------LLTTRTADWF---------------KSRGFRE------------ 568
F LLTTR S
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 569 CSIEMIPEE-------------RRKRINLSR--NSKYYMKKLLPDTSGIIVD 605
C + +P E R L+ N K+ L ++
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* Length = 207 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 3e-05
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 21/138 (15%)
Query: 452 RTAKVTDLSGIKQIIQ-PLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALF 506
R D +G+ +I + + +E+ L + EG+++A
Sbjct: 38 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 97
Query: 507 PFFKE--------------KCGEVAAIGVSPECRGQGQGDKLLD-YIEKKAASLGLDMLF 551
+ +E + A+ V R QG+G LL Y+ A +
Sbjct: 98 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 157
Query: 552 LLTTRTA-DWFKSRGFRE 568
L+ +++ GF
Sbjct: 158 LMCEDALVPFYQRFGFHP 175
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A Length = 166 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-05
Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 21/139 (15%)
Query: 452 RTAKVTDLSGIKQI-----IQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 506
R D +G+ +I I + L + EG+++A
Sbjct: 9 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 68
Query: 507 PFFKE--------------KCGEVAAIGVSPECRGQGQGDKLLD-YIEKKAASLGLDMLF 551
+ +E + A+ V R QG+G LL Y+ A +
Sbjct: 69 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 128
Query: 552 LLTTRTA-DWFKSRGFREC 569
L+ +++ GF
Sbjct: 129 LMCEDALVPFYQRFGFHPA 147
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} Length = 163 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 452 RTAKVTDLSGIKQII--------QPLVESGAL-----VRRTDEELLKALDS--FYVVERE 496
R A +D I+ + Q L+ S E L + + F V+E+
Sbjct: 9 RKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQA 68
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552
++I A ++ E+AA + PE +G G +LL+ +F+
Sbjct: 69 DKVIGFANFIEL-EKGKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFV 121
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} Length = 276 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 5e-05
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
+ A L+ + + L + +G+++A F +
Sbjct: 144 QIAGTEQLTAFVTFAAANIGAPEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQY 203
Query: 512 KCGEVAAIG--VSPECRGQGQGDKLLDYIEKKAASLGL 547
+ E A +G V+ RGQG K+L ++ K AA+ GL
Sbjct: 204 Q-TEYADLGMIVAQSNRGQGIAKKVLTFLTKHAATQGL 240
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} Length = 147 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 8/95 (8%)
Query: 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIG---VSPECRGQGQGDKLLD 536
D + + + + I L P + V G RG G G +LL
Sbjct: 39 DVKDTDQCEYAVLYLQPDLPITTLRLEP----QADHVMRFGRVCTRKAYRGHGWGRQLLT 94
Query: 537 YIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 570
E+ A G + +++ G+R +
Sbjct: 95 AAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTA 129
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} Length = 147 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 6/75 (8%)
Query: 476 VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ L + V Q + L + A+ + P+ RG G G L+
Sbjct: 39 LEDLVRSFLPEAPLWVAVNERDQPVGFMLL------SGQHMDALFIDPDVRGCGVGRVLV 92
Query: 536 DYIEKKAASLGLDML 550
++ A L ++
Sbjct: 93 EHALSMAPELTTNVN 107
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} Length = 201 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 1e-04
Identities = 17/155 (10%), Positives = 38/155 (24%), Gaps = 28/155 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVE----------SGALVRRTDEELLKALD--SFYVVEREGQI 499
R A ++ I +I+ +++ + +V +G +
Sbjct: 23 RLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGML 82
Query: 500 IACAALFPFF---------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS 544
AA+ + I +S + RG+G L + +
Sbjct: 83 ATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKG 142
Query: 545 LGL-DMLFLLTTRTADWFKSRGFRECSIEMIPEER 578
G++ C + R
Sbjct: 143 PDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVR 177
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} Length = 189 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKA---LDSFYVVERE-GQIIACAALF 506
R + D + I Q++ E L + LL + V E G+I + +
Sbjct: 30 RPPRRNDGAAIHQLVS---ECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAY 86
Query: 507 -PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD 559
+ V + V RG G +L +I ++ + L TT D
Sbjct: 87 LLPTRPDVLFVWQVAVHSRARGHRLGRAMLGHILERQECRHVR--HLETTVGPD 138
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} Length = 188 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 28/156 (17%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLK---ALDSFYVVEREGQIIA 501
R K++DL I +++ E E + A D YV+E +I
Sbjct: 22 RLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYG 81
Query: 502 CAALFPF------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549
+ +E + + S +G +L +Y+ + G ++
Sbjct: 82 FIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSK--EYKGAATELFNYVIDVVKARGAEV 139
Query: 550 LFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 581
+ T F GF + +++ +
Sbjct: 140 ILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDK 175
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} Length = 422 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 15/129 (11%), Positives = 36/129 (27%), Gaps = 11/129 (8%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 508
T D + I + + +E + + E + + +
Sbjct: 28 HTITDDDWTRIALLARFAFGDIEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDM 87
Query: 509 F-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 561
++ + V+P R +G + + + A G L +LT +
Sbjct: 88 QLTVPGGEVLPVAGISFVAVAPTHRRRGVLRAMYTELHDRIARAG-YPLAVLTASEGGIY 146
Query: 562 KSRGFRECS 570
G+ +
Sbjct: 147 GRFGYGVAT 155
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} Length = 428 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 4e-04
Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 7/99 (7%)
Query: 467 QPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF-------FKEKCGEVAAI 519
+ A RT A+ +++ A ++ +
Sbjct: 52 DFIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVVLPTAGLSFV 111
Query: 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 558
V+P R +G + + ++ A G + L +
Sbjct: 112 AVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHASEGG 150
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* Length = 171 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 5e-04
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 452 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL--------------DSFYVVE 494
R A D S I ++I+ L + V T+++LL+ +
Sbjct: 7 RPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTP 66
Query: 495 REGQIIACAALFPFFKEKCGE---VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 551
I+ A + + G+ + V + RG G G ++L + + A +
Sbjct: 67 EGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMH 126
Query: 552 LLT----TRTADWFKSRGFR 567
L + +++K RG
Sbjct: 127 FLVAEWNEPSINFYKRRGAS 146
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} Length = 197 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 6e-04
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 28/108 (25%)
Query: 489 SFYVVEREGQIIACA--------------------ALFPFFKEKCGEVA------AIGVS 522
SF V+ + I A +F F +
Sbjct: 57 SFAFVDADDNIKAQILNIPYDAYENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIG 116
Query: 523 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT--RTADWFKSRGFRE 568
E G+G KLL ++++S G ++ T + + F+ GF
Sbjct: 117 SEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHGFET 164
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* Length = 224 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 7e-04
Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 452 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFF 509
R K+ DL + + E+ + + + +++E E +I+
Sbjct: 16 RHPKIEDLRDLIALETLCWSENLQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRID 75
Query: 510 KE-------------------KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDM 549
++ A+ + PE + QG GD+LL+++ + A + G++
Sbjct: 76 NPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEK 135
Query: 550 LFL 552
+
Sbjct: 136 VVA 138
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* Length = 170 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 8e-04
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 452 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSFYVVEREG----- 497
R AK D I ++I+ L E V+ ++E L V E
Sbjct: 7 REAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKL 66
Query: 498 ---QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 551
++ + + K + + I V PE RGQG G K++ + + A G
Sbjct: 67 LGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFR 126
Query: 552 LLT----TRTADWFKSRGFR 567
L R D +K+ G +
Sbjct: 127 LAVLDWNQRAMDLYKALGAQ 146
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 609 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 100.0 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 100.0 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 100.0 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 100.0 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 100.0 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 100.0 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 100.0 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 100.0 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 100.0 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 100.0 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 100.0 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 100.0 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 100.0 | |
| 3ll9_A | 269 | Isopentenyl phosphate kinase; mevalonate biosynthe | 100.0 | |
| 2e9y_A | 316 | Carbamate kinase; transferase, structural genomics | 100.0 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 100.0 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 100.0 | |
| 1e19_A | 314 | Carbamate kinase-like carbamoylphosphate synthetas | 100.0 | |
| 3kzf_A | 317 | Carbamate kinase; arginine dihydrolase pathway, gi | 100.0 | |
| 4axs_A | 332 | Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm | 100.0 | |
| 3d40_A | 286 | FOMA protein; fosfomycin, antibiotic resistance, k | 100.0 | |
| 3ll5_A | 249 | Gamma-glutamyl kinase related protein; alternate m | 100.0 | |
| 2j5v_A | 367 | Glutamate 5-kinase; proline biosynthesis, gamma gl | 100.0 | |
| 2ako_A | 251 | Glutamate 5-kinase; structural genomics, PSI, prot | 99.97 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 99.97 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 99.97 | |
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 99.96 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 99.96 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 99.96 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 99.96 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 99.96 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 99.95 | |
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 99.95 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 99.95 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 99.95 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 99.95 | |
| 3ab4_A | 421 | Aspartokinase; aspartate kinase, concerted inhibit | 99.94 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 99.94 | |
| 3l76_A | 600 | Aspartokinase; allostery, ACT domains, kinase tran | 99.87 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 99.86 | |
| 3c1m_A | 473 | Probable aspartokinase; allosteric inhibition, thr | 99.8 | |
| 2cdq_A | 510 | Aspartokinase; aspartate kinase, amino acid metabo | 99.7 | |
| 2j0w_A | 449 | Lysine-sensitive aspartokinase 3; feedback inhibit | 99.7 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 99.67 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 99.67 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 99.65 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 99.64 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 99.63 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 99.63 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 99.63 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 99.63 | |
| 4h89_A | 173 | GCN5-related N-acetyltransferase; N-acyltransferas | 99.63 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 99.62 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 99.62 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 99.62 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 99.61 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 99.61 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 99.6 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 99.6 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 99.6 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 99.6 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 99.6 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 99.6 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 99.59 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 99.59 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 99.59 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 99.59 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 99.58 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 99.58 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 99.58 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 99.58 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 99.58 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 99.58 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 99.58 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 99.58 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 99.58 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 99.57 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 99.57 | |
| 3i9s_A | 183 | Integron cassette protein; oyster POND, woods HOLE | 99.57 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 99.57 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 99.57 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 99.56 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 99.56 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 99.56 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 99.56 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 99.55 | |
| 4fd4_A | 217 | Arylalkylamine N-acetyltransferase like 5B; GNAT; | 99.55 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 99.55 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 99.55 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 99.54 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 99.54 | |
| 2jdc_A | 146 | Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1. | 99.54 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 99.54 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 99.54 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 99.54 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 99.53 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 99.53 | |
| 1qsm_A | 152 | HPA2 histone acetyltransferase; protein-acetyl coe | 99.53 | |
| 3owc_A | 188 | Probable acetyltransferase; structural genomics, P | 99.53 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 99.53 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 99.52 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 99.52 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 99.52 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 99.52 | |
| 3fbu_A | 168 | Acetyltransferase, GNAT family; structur genomics, | 99.51 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 99.51 | |
| 1xeb_A | 150 | Hypothetical protein PA0115; midwest center for st | 99.51 | |
| 2fl4_A | 149 | Spermine/spermidine acetyltransferase; structural | 99.5 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 99.5 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 99.5 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 99.5 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 99.5 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 99.49 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 99.49 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 99.49 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 99.49 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 99.49 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 99.49 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 99.48 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 99.48 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 99.48 | |
| 2vi7_A | 177 | Acetyltransferase PA1377; GNAT, GCN5 family, N-ace | 99.48 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 99.48 | |
| 2bue_A | 202 | AAC(6')-IB; GNAT, transferase, aminoglycoside, flu | 99.48 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 99.47 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 99.47 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 99.47 | |
| 3f5b_A | 182 | Aminoglycoside N(6')acetyltransferase; APC60744, l | 99.47 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 99.46 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 99.46 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 99.45 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 99.45 | |
| 3tvi_A | 446 | Aspartokinase; structural genomics, ACT domains, r | 99.45 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 99.45 | |
| 3igr_A | 184 | Ribosomal-protein-S5-alanine N-acetyltransferase; | 99.44 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 99.44 | |
| 3juw_A | 175 | Probable GNAT-family acetyltransferase; structural | 99.44 | |
| 3tth_A | 170 | Spermidine N1-acetyltransferase; central intermedi | 99.44 | |
| 2qec_A | 204 | Histone acetyltransferase HPA2 and related acetylt | 99.44 | |
| 1s7k_A | 182 | Acetyl transferase; GNAT; 1.80A {Salmonella typhim | 99.44 | |
| 2fsr_A | 195 | Acetyltransferase; alpha-beta-sandwich, structural | 99.44 | |
| 3eg7_A | 176 | Spermidine N1-acetyltransferase; structural genomi | 99.43 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 99.43 | |
| 3eo4_A | 164 | Uncharacterized protein MJ1062; APC60792.2,MJ_1062 | 99.42 | |
| 3r9f_A | 188 | MCCE protein; microcin C7, acetyltransferase, SELF | 99.41 | |
| 4fd5_A | 222 | Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A | 99.41 | |
| 3te4_A | 215 | GH12636P, dopamine N acetyltransferase, isoform A; | 99.41 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 99.4 | |
| 1nsl_A | 184 | Probable acetyltransferase; structural genomics, h | 99.4 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 99.4 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 99.39 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 99.39 | |
| 1yre_A | 197 | Hypothetical protein PA3270; APC5563, midwest cent | 99.38 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 99.38 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 99.38 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 99.37 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 99.37 | |
| 3pzj_A | 209 | Probable acetyltransferases; MCSG, PSI-2, structur | 99.36 | |
| 2fck_A | 181 | Ribosomal-protein-serine acetyltransferase, putat; | 99.36 | |
| 2z10_A | 194 | Ribosomal-protein-alanine acetyltransferase; alpha | 99.36 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 99.34 | |
| 1yk3_A | 210 | Hypothetical protein RV1347C/MT1389; acyltransfera | 99.34 | |
| 2qml_A | 198 | BH2621 protein; structural genomics, joint center | 99.33 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 99.32 | |
| 2k5t_A | 128 | Uncharacterized protein YHHK; N-acetyl transferase | 99.32 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 99.31 | |
| 2d4p_A | 141 | Hypothetical protein TTHA1254; structural genomics | 99.3 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.28 | |
| 2g0b_A | 198 | FEEM; N-acyl transferase, environmental DNA, prote | 99.28 | |
| 2vzy_A | 218 | RV0802C; transferase, GCN5-related N-acetyltransfe | 99.28 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 99.28 | |
| 4fd7_A | 238 | Putative arylalkylamine N-acetyltransferase 7; GNA | 99.28 | |
| 3tcv_A | 246 | GCN5-related N-acetyltransferase; GRAM negative co | 99.27 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 99.26 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.25 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 99.25 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 99.23 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 99.23 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 99.22 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 99.2 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 99.2 | |
| 4ava_A | 333 | Lysine acetyltransferase; allosteric regulation, d | 99.2 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 99.2 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.16 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 99.12 | |
| 2pr1_A | 163 | Uncharacterized N-acetyltransferase YLBP; YIBP pro | 99.11 | |
| 2q04_A | 211 | Acetoin utilization protein; ZP_00540088.1, struct | 99.08 | |
| 3g3s_A | 249 | GCN5-related N-acetyltransferase; ZP_00874857.1, a | 99.06 | |
| 1r57_A | 102 | Conserved hypothetical protein; GCN5, N-acetyltran | 99.05 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.03 | |
| 2zw5_A | 301 | Bleomycin acetyltransferase; dimer, two domains; H | 99.01 | |
| 2ft0_A | 235 | TDP-fucosamine acetyltransferase; GNAT fold acetyl | 98.96 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 98.93 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 98.91 | |
| 1ro5_A | 201 | Autoinducer synthesis protein LASI; alpha-beta-alp | 98.78 | |
| 2zpa_A | 671 | Uncharacterized protein YPFI; RNA modification enz | 98.71 | |
| 3p2h_A | 201 | AHL synthase; acyl-ACP binding, SAM binding, signa | 98.53 | |
| 1xmt_A | 103 | Putative acetyltransferase; structural genomics, p | 98.46 | |
| 1kzf_A | 230 | Acyl-homoserinelactone synthase ESAI; alpha-beta, | 98.4 | |
| 3shp_A | 176 | Putative acetyltransferase STHE_0691; PSI-biology, | 98.39 | |
| 1bob_A | 320 | HAT1, histone acetyltransferase; histone modificat | 98.16 | |
| 1yle_A | 342 | Arginine N-succinyltransferase, alpha chain; struc | 98.08 | |
| 3dns_A | 135 | Ribosomal-protein-alanine acetyltransferase; N-ter | 97.85 | |
| 2p0w_A | 324 | Histone acetyltransferase type B catalytic subuni; | 95.21 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 95.19 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 91.87 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 91.43 | |
| 2ozu_A | 284 | Histone acetyltransferase MYST3; structural genomi | 90.94 | |
| 3to7_A | 276 | Histone acetyltransferase ESA1; MYST family; HET: | 90.76 | |
| 4hkf_A | 191 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 90.67 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 90.65 | |
| 2ou2_A | 280 | Histone acetyltransferase htatip; structural genom | 90.31 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 89.97 | |
| 2pq8_A | 278 | Probable histone acetyltransferase MYST1; MOF, str | 89.66 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 89.51 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 88.18 | |
| 4b5o_A | 200 | Alpha-tubulin N-acetyltransferase; microtubules, c | 87.93 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 87.49 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 87.33 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 86.82 | |
| 4h6u_A | 200 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 86.7 | |
| 3gkr_A | 336 | FEMX; FEMX, peptidoglycan, hexapeptide, transferas | 86.54 | |
| 4gs4_A | 240 | Alpha-tubulin N-acetyltransferase; acetyl coenzyme | 86.12 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 84.08 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 83.76 | |
| 1rxt_A | 496 | Myristoyl-, glycylpeptide N-tetradecanoyltransfera | 82.57 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 80.58 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-71 Score=609.80 Aligned_cols=436 Identities=35% Similarity=0.583 Sum_probs=392.6
Q ss_pred CCCCch-hHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCc
Q 007275 75 YNPVED-EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE 153 (609)
Q Consensus 75 g~~~~~-~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~ 153 (609)
++++.. .+|+++||+++|||++||+|++|||+||++|+++++..++++|+.|++.|++||||||||++++.++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~yi~~~~~~~iViK~GG~~l~~~~~~~~~~~i~~l~~~g~~vvlVhggg~~~~~~~~~~~~~ 97 (456)
T 3d2m_A 18 GSHMNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRT 97 (456)
T ss_dssp -------CCHHHHHHHHHHHHHHHTTCEEEEEECGGGGTSTHHHHHHHHHHHHHHTTCEEEEEECCHHHHHTTTTTTTCC
T ss_pred cccCCchhHHHHHHHHhHHHHHHhcCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHCCCC
Confidence 344433 5799999999999999999999999999999987789999999999999999999999999999999999999
Q ss_pred ccccCCccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcce
Q 007275 154 AKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGAT 233 (609)
Q Consensus 154 ~~~~~g~rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~ 233 (609)
+++.+|.|+|++++|+.+.+++|+++..+++.| . +|++..-.++++++.|++|+++++.++.+++|+||+
T Consensus 98 ~~~~~g~r~t~~~~l~~~~~~~G~~~~~l~~~l---------~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~ 167 (456)
T 3d2m_A 98 PHYCRGLRVTDETSLGQAQQFAGTVRSRFEAAL---------C-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYA 167 (456)
T ss_dssp CCCGGGCCCBCHHHHHHHHHHHHHHHHHHHHHH---------H-TC--------CCCEECCSCEEEEECCEETTEECBTB
T ss_pred CEeeCCeecCCHHHHHHHHHHHhHHHHHHHHHH---------h-cccccCCCccceeeccCcEEEEEEcccccCcccCce
Confidence 999999999999999998555599999998864 5 666521134899999999999999887788899999
Q ss_pred eeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHH
Q 007275 234 GEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEA 312 (609)
Q Consensus 234 G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~ 312 (609)
|+|+.+|.+.|+.||++|.|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||||++ .++++|++++.+|+
T Consensus 168 g~v~~v~~~~i~~lL~~g~ipIi~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~~~~~i~~i~~~e~ 247 (456)
T 3d2m_A 168 GVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEA 247 (456)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCTTSCBCSEEEHHHH
T ss_pred eeEEEECHHHHHHHHHCCCeEEECCcccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCCCCCccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986 57999999999988
Q ss_pred HHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccc
Q 007275 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (609)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~ 392 (609)
++++..+ .| |
T Consensus 248 ~~~~~~g-------------------------------------------------------~g-g-------------- 257 (456)
T 3d2m_A 248 QSLAEHA-------------------------------------------------------AS-E-------------- 257 (456)
T ss_dssp HHHHTTC-------------------------------------------------------CH-H--------------
T ss_pred HHHHhcc-------------------------------------------------------CC-C--------------
Confidence 8775321 12 4
Q ss_pred hhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCcCCHHHHHHHHhhhHhh
Q 007275 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472 (609)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~~D~~~I~~L~~~~~~~ 472 (609)
|.+||+||..|++.|+++++|+|++.+++++.++|++++.||+|.++.+..||+++++|++.+.+++.+....
T Consensus 258 -------m~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~~~~~IR~a~~~D~~~i~~l~~~~~~~ 330 (456)
T 3d2m_A 258 -------TRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQ 330 (456)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCSSCSSEEEECCCCCEEEECCGGGHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHhhcCCceeeecccceeeCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999988999999999999999999999999999999999999888777
Q ss_pred ccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 007275 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552 (609)
Q Consensus 473 ~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l 552 (609)
.+..+|+.+.+..++..+|+++.+++++||+.+.+..+...++|..++|+|+|||+|+|++||++++++|++.|++.+++
T Consensus 331 ~~~~~~~~~~~~~~l~~~~va~~~g~iVG~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l 410 (456)
T 3d2m_A 331 GILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFA 410 (456)
T ss_dssp TSSCCCCHHHHHHHGGGEEEEEETTEEEEEEEEEECSSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCccCCHHHHHHHHhhEEEEEECCEEEEEEEEEecCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 78788999999999988999999999999999987656678999999999999999999999999999999999999999
Q ss_pred EeHHHHHHHHHCCCeEeeeecchhHhhhhcccC-CCceeEEeecCC
Q 007275 553 LTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKKLLP 597 (609)
Q Consensus 553 ~t~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~-~~s~i~mkkll~ 597 (609)
...++.+||+|+||+..+...+|..++..|++. +++++|+|+|++
T Consensus 411 ~N~~a~~fY~k~GF~~~~~~~~p~~~~~~y~~~~r~~~v~~k~L~~ 456 (456)
T 3d2m_A 411 LSTNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR 456 (456)
T ss_dssp EESSCHHHHHTTTCEEECGGGSCHHHHHHHHHHCCCCEEEEEECCC
T ss_pred EcHHHHHHHHHCCCEEeCcccCCHHHHhhcccccCCeEEEEEEcCC
Confidence 877899999999999999999999999999988 999999999864
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=480.80 Aligned_cols=369 Identities=21% Similarity=0.280 Sum_probs=315.2
Q ss_pred HHHhhhhHHhhcC----CeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccC
Q 007275 87 FREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (609)
Q Consensus 87 ~r~a~pyi~~~~~----k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rv 162 (609)
+||++|||++|++ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|.|+
T Consensus 42 ~re~~pyi~~f~~~~~~~~iViK~GGsv~~~-~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~Rv 120 (460)
T 3s6g_A 42 GKEIREYLHRFSGIDQERFAVIKVGGAVIQD-DLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLRV 120 (460)
T ss_dssp HHHHHHHHHHTSSSCGGGSEEEEECHHHHHH-CHHHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHHSCCCCCCSSSCC
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEEChHHhhh-HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccC
Confidence 5699999999998 89999999998875 589999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHH
Q 007275 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (609)
Q Consensus 163 t~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~ 242 (609)
|++++|+++.++.+++|..|+++ |.++|++ ++++++ +.| ++++ ++++|+|++|+|+.+|.+
T Consensus 121 Td~~~l~vv~~~lg~vn~~lv~a---------L~~~G~~----Av~lsg--~~~-~a~~---~~~~d~g~~G~I~~v~~~ 181 (460)
T 3s6g_A 121 TRDEAMPIIRDTLTQANLALVDA---------IRDAGGR----AAAVPR--GVF-EADI---VDADKLGRVGEPRHIHLD 181 (460)
T ss_dssp BCTTTHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS--SSE-EEEE---SCTTTTBSEEEEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----ceEEec--CeE-EEEE---ecCcccCccCcceEEcHH
Confidence 99999999965557999999886 5889988 888875 444 6664 567899999999999999
Q ss_pred HHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHH-HHHHHHHhhc
Q 007275 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRV 320 (609)
Q Consensus 243 ~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~-e~~~l~~~~~ 320 (609)
.|+.+|++|.|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||||++ +++++|++++.. |++.++..+
T Consensus 182 ~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~- 260 (460)
T 3s6g_A 182 LVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQAD- 260 (460)
T ss_dssp HHHHHHHTTCEEEEECEEECTTCCEEEECHHHHHHHHHHHHCCSEEEEECSSCSCBCTTSSBCCEEEHHHHHHHHHHCS-
T ss_pred HHHHHHHCCcEEEEECceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCeecceeCcHHHHHHHHhcC-
Confidence 99999999999999999999999999999999999999999999999999999985 679999999986 777776431
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
..+| | |
T Consensus 261 ----------------------------------------------------~~tG-G---------------------M 266 (460)
T 3s6g_A 261 ----------------------------------------------------WVNG-G---------------------M 266 (460)
T ss_dssp ----------------------------------------------------SSCH-H---------------------H
T ss_pred ----------------------------------------------------CCCC-c---------------------H
Confidence 1123 4 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCc---CCHHHHHHHHhhhHhhccCcc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVR 477 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~---~D~~~I~~L~~~~~~~~~~~~ 477 (609)
.+||+||..+++ |+++++|++++.+++|+.|||+++++||+|.++ +.+|.++. .|++.|.+++++++. +...+
T Consensus 267 ~~Kl~aa~~a~~-gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv~ 342 (460)
T 3s6g_A 267 RLKLEEIKRLLD-DLPLSSSVSITRPSELARELFTHAGSGTLIRRG--ERMVATDDKSSLDLGRLDNLVKAAFG-RPAVE 342 (460)
T ss_dssp HHHHHHHHHHHH-TSCTTCEEEEECGGGHHHHHHSSCCSSEEEECC--CCEEEESCGGGSCHHHHHHHHHHHSS-SCBCT
T ss_pred HHHHHHHHHHHh-CCCcEEEEEeCCCcHHHHHHhcCCCCceEEEcC--CceEEeccCCcCCHHHHHHHHHHHcC-cccHH
Confidence 999999888876 677799999999999999999999999999988 56888888 999999999999777 55543
Q ss_pred CCHHHHH-hhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--
Q 007275 478 RTDEELL-KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 554 (609)
Q Consensus 478 ~~~e~l~-~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-- 554 (609)
+.+. ..+..+|+.+.++ +++.+++++..+||++|+|+|+||+.|+|+.|++++++.. +++++.+
T Consensus 343 ---~~le~~~i~~~~v~e~~~-----aaaiv~~~~~~aeL~kfaV~~~~~g~g~gd~l~~~i~~~~-----~~L~Wrsr~ 409 (460)
T 3s6g_A 343 ---GYWDRLRVDRAFVTESYR-----AAAITTRLDGWVYLDKFAVLDDARGEGLGRTVWNRMVDYA-----PQLIWRSRT 409 (460)
T ss_dssp ---THHHHCCCSEEEEETTSS-----EEEEEEEETTEEEEEEEEECHHHHHHTHHHHHHHHHHHHC-----SSEEEEEET
T ss_pred ---HHHhhcCcceEEEecCCC-----EEEEEecCCCCeEEEEEEEChhhhcCCHHHHHHHHHHHhC-----CceEEEeCC
Confidence 3343 4567889888777 2233345678999999999999999999999999998863 4466665
Q ss_pred -HHHHHHHH-H-CCCe
Q 007275 555 -TRTADWFK-S-RGFR 567 (609)
Q Consensus 555 -~~a~~fYe-k-~GF~ 567 (609)
++..+||- + -|+.
T Consensus 410 ~n~~~~Wyf~~s~G~~ 425 (460)
T 3s6g_A 410 NNPVNGFYFEECDGAV 425 (460)
T ss_dssp TCTTHHHHHHHCSEEE
T ss_pred CCCccceEEeeeeEEE
Confidence 36677773 3 3543
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=447.87 Aligned_cols=375 Identities=21% Similarity=0.287 Sum_probs=299.4
Q ss_pred HHHHhhhhHHhhcC----CeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCcc
Q 007275 86 WFREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (609)
Q Consensus 86 ~~r~a~pyi~~~~~----k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~r 161 (609)
..||+.|||++||+ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+|
T Consensus 31 ~~re~~~yl~~F~~~~~~~~iVIK~GGsv~~~-~l~~la~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~R 109 (464)
T 4ab7_A 31 TKREVEQYLKYFTSVSQQQFAVIKVGGAIISD-NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIR 109 (464)
T ss_dssp ------------------CCEEEEECHHHHHH-CHHHHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHTTCCCCEETTEE
T ss_pred ChhhHHHHHHHHhCCCCCceEEEEECHHHhhc-hHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCee
Confidence 35667788888887 89999999999875 58999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCH
Q 007275 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (609)
Q Consensus 162 vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~ 241 (609)
+|++++|+++.++.+.+|..|++. |+++|++ ++++++ +++++++ ++++|+|++|+|+.+|.
T Consensus 110 vTd~~tl~vv~mv~~~vn~~lv~~---------L~~~G~~----Avglsg---g~~~a~~---~~~~d~g~vG~I~~v~~ 170 (464)
T 4ab7_A 110 ITDEHTMAVVRKCFLEQNLKLVTA---------LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTK 170 (464)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS---SSEEEEE---SCTTTTBSBEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----eEEECC---CcEEEEe---cCccccCCcCcccccCH
Confidence 999999999966667899999886 5889988 888864 4567776 46789999999999999
Q ss_pred HHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC--CCCccccccCHHH-HHHHHHh
Q 007275 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQ 318 (609)
Q Consensus 242 ~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~--~~~~lI~~it~~e-~~~l~~~ 318 (609)
+.|+.+|+.|.|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||||++ +++++|++++.+| ++.++..
T Consensus 171 ~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~~~~~lI~~it~~e~~~~li~~ 250 (464)
T 4ab7_A 171 EPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQ 250 (464)
T ss_dssp HHHHHHHHTTCEEEEESEEECTTCBEEECCHHHHHHHHHHHHCCSEEEEEESSCSEECTTTCCEECEEEHHHHHHHHHTC
T ss_pred HHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHHHHHHHHHHcCCCEEEEEecccccccCCCCcCCcccCHHHHHHHHHhc
Confidence 999999999999999999888899999999999999999999999999999999985 3799999999875 5666532
Q ss_pred hchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhccc
Q 007275 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (609)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~ 398 (609)
+ ..+| |
T Consensus 251 ~-----------------------------------------------------~~tg-G-------------------- 256 (464)
T 4ab7_A 251 S-----------------------------------------------------WVKY-G-------------------- 256 (464)
T ss_dssp S-----------------------------------------------------SCCH-H--------------------
T ss_pred C-----------------------------------------------------CCCC-c--------------------
Confidence 1 1123 4
Q ss_pred CCHHHHHHHHHHHHc---CCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCcCCHHHHHHHHhhhHhhc--
Q 007275 399 GYLSELAAAAFVCRR---GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG-- 473 (609)
Q Consensus 399 ~m~~kl~aa~~a~~~---Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~~D~~~I~~L~~~~~~~~-- 473 (609)
|.+||+||..|++. | ..++|++ +++++.|||+++++||+|.++ |+.+|+++.+|+.++.+|.+.+....
T Consensus 257 -M~pKl~aa~aa~~~v~~g-~~v~I~~---~~~ll~eLft~~g~GT~I~~~-~~~~r~a~~~dv~~~~~L~~lL~~s~~~ 330 (464)
T 4ab7_A 257 -TKLKIREIKELLDYLPRS-SSVAIIN---VQDLQKELFTDSGAGTMIRRG-YKLVKRSSIGEFPSADALRKALQRDAGI 330 (464)
T ss_dssp -HHHHHHHHHHHHTTSCTT-CEEEEEE---STTHHHHTTSSSTTSEEEECC-CCCEEESSGGGSSCHHHHHHHHTTSTTT
T ss_pred -HHHHHHHHHHHHHhcccC-cEEEEec---ChHHHHHHhcCCCCceEEecC-ccccccCChhhhcCHHHHHHHHHhcccc
Confidence 99999955544443 5 4689998 677999999999999999999 99999999999877777766666542
Q ss_pred cCccCCHHHHHhhc-CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 007275 474 ALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552 (609)
Q Consensus 474 ~~~~~~~e~l~~~i-~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l 552 (609)
-....+.+.|.+.+ ...+.++.|+..-|++.+. .+....+|+.|+|.|+.|+.|++..+++.+.+.. +.+++
T Consensus 331 ~~~~~~v~~y~~~L~~~~~~iy~d~~y~~~AIv~--~~~~~~~LdkFav~~~~~~~gv~d~vf~~i~~d~-----~~L~W 403 (464)
T 4ab7_A 331 SSGKESVASYLRYLENSDFVSYADEPLEAVAIVK--KDTNVPTLDKFVCSDAAWLNNVTDNVFNVLRRDF-----PALQW 403 (464)
T ss_dssp SSSSSCHHHHHHHHHTSCEEEEECTTCSEEEEEE--CSSSSCEEEEEEECHHHHHTTHHHHHHHHHHHHC-----SSEEE
T ss_pred cchhhhHHHHHHHhhcCceEEEEeCCceEEEEEe--cCCCCEEEEEEEEcccccccCHHHHHHHHHHhhC-----CceEE
Confidence 12233566776665 3334555677788888776 4567899999999999999999999999998874 34666
Q ss_pred Ee---HHHHHHHH-H-CCCe
Q 007275 553 LT---TRTADWFK-S-RGFR 567 (609)
Q Consensus 553 ~t---~~a~~fYe-k-~GF~ 567 (609)
.+ ++...||- + -|+-
T Consensus 404 rsr~~n~~~~Wyf~rs~Gs~ 423 (464)
T 4ab7_A 404 VVSENDANIAWHFDKSQGSY 423 (464)
T ss_dssp EEETTCTTHHHHHHHCSEEE
T ss_pred EeCCCCCccceEEeeeeEEE
Confidence 55 36677773 3 3554
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-53 Score=464.89 Aligned_cols=372 Identities=23% Similarity=0.323 Sum_probs=309.9
Q ss_pred HHHhhhhHHhhcC----CeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccC
Q 007275 87 FREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (609)
Q Consensus 87 ~r~a~pyi~~~~~----k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rv 162 (609)
+||++|||++|++ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+|+
T Consensus 45 ~re~~pyi~~f~~~~~~~~iViK~GG~v~~~-~l~~va~dI~~l~~~G~~~VvVHGgg~~i~~~l~~~gi~~~f~~G~Rv 123 (467)
T 3s6k_A 45 AKEISQYLKRFSQLDAKRFAVVKVGGAVLRD-DLEALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRV 123 (467)
T ss_dssp HHHHHHHHHSSSSSCSTTSCCCCCCHHHHTT-CCHHHHHHHHHHHTTSCCCCCCCCCCHHHHHHHHTTSCCCCCCSSSCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEEChHHhhh-HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccC
Confidence 5699999999998 89999999998775 589999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHH
Q 007275 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (609)
Q Consensus 163 t~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~ 242 (609)
|++++|+++.++.+++|..|+++ |+++|++ ++++++ +.| .++ ++++.|+|++|+|+.+|.+
T Consensus 124 Td~~~l~vv~~~~g~vn~~Lv~a---------L~~~G~~----Av~lsg--~~~-~a~---~~~~~d~g~~G~I~~v~~~ 184 (467)
T 3s6k_A 124 TSPHALAIVRKVFQASNLKLVEA---------LQQNGAR----ATSITG--GVF-EAE---YLNRDTYGLVGEVKAVNLA 184 (467)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHH---------HHHHTCC----BCCCCS--SSB-CCC---BSCSSSSBSBBCCCCBCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----ceEEcC--ccE-EEE---eccCcccCccceEEEEcHH
Confidence 99999999965557999999886 5888987 677664 333 554 3567899999999999999
Q ss_pred HHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHH-HHHHHHHhhc
Q 007275 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRV 320 (609)
Q Consensus 243 ~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~-e~~~l~~~~~ 320 (609)
.|+.+|++|.|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||+|++ +++++|++++.. |++.++..+
T Consensus 185 ~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~- 263 (467)
T 3s6k_A 185 PIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQP- 263 (467)
T ss_dssp HHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHHHHHHHHHHHCCSSCCCCCSSCSCCCSSCCCCCCCCTTTTTHHHHTSS-
T ss_pred HHHHHHHCCCEEEEECceECCCCcEEecCHHHHHHHHHHhcCCCEEEEEecccceeCCCCCCccccChHHHHHHHHhcC-
Confidence 99999999999999999999899999999999999999999999999999999985 679999999985 677665321
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
..+| | |
T Consensus 264 ----------------------------------------------------~~tG-G---------------------M 269 (467)
T 3s6k_A 264 ----------------------------------------------------WING-G---------------------M 269 (467)
T ss_dssp ----------------------------------------------------SCCS-H---------------------H
T ss_pred ----------------------------------------------------CCCC-c---------------------h
Confidence 1133 4 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccccccccCCc---CCHHHHHHHHhhhHhhccCcc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVR 477 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~a~~---~D~~~I~~L~~~~~~~~~~~~ 477 (609)
.+||+||..+.+ |++++++++++.+++|+.+||+++++||+|.++ +.+|.++. .|++.|.+++++.+. +...+
T Consensus 270 ~~Kl~aa~~a~~-gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv~ 345 (467)
T 3s6k_A 270 RVKIEQIKDLLD-RLPLESSVSITRPADLAKELFTHKGSGTLVRRG--ERVLRATSWDELDLPRLTSLIESSFG-RTLVP 345 (467)
T ss_dssp HHHHHHHHHHHT-TSCSSCCBCCCCTTTHHHHHHSSCTTSCCBCCC--CCEEEESSTTSSCHHHHHHHHHHHSS-SCCCT
T ss_pred HHHHHHHHHHHh-CCCcEEEEEeCCchHHHHHHhcCCCcceEEeCC--CceEEccccCcCCHHHHHHHHHHhhc-cchHH
Confidence 999999888776 677799999999999999999999999999988 45788777 899999999998776 44332
Q ss_pred CCHHHHH-hhcCeEEEEEECCEEEEEEEEEEe---cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q 007275 478 RTDEELL-KALDSFYVVEREGQIIACAALFPF---FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 553 (609)
Q Consensus 478 ~~~e~l~-~~i~~~~V~~~dg~IVG~~~l~~~---~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~ 553 (609)
+.+. ..+..+++.+.++ |++.+++. ..+..++|++|+|+|++|+.|+|..|++++++. ++++++.
T Consensus 346 ---~yle~~~i~~~~v~e~~~---aaaiv~~e~~~~~~~~~~L~kfaV~~~~~g~g~~d~l~~~i~~~-----~p~L~Wr 414 (467)
T 3s6k_A 346 ---DYFSNTKLLRAYVSENYR---AAVILTDEGMLGASALIYLDKFAVLDDAQGEGLGRAVWNVMREE-----TPQLFWR 414 (467)
T ss_dssp ---TCTTTCCCSEEEEETTSS---CEEEEEEECSSTTCSEEEEEEECCCHHHHTTTSHHHHHHHHTTT-----CCSEEEE
T ss_pred ---HHHhccCceEEEEecCCc---EEEEEeccccCCCCCCeEEEEEEEchhhhcCCHHHHHHHHHHHh-----CCceEEE
Confidence 2222 2457788887766 33333322 125789999999999999999999999988764 4457776
Q ss_pred e---HHHHHHHH-H-CCCeE
Q 007275 554 T---TRTADWFK-S-RGFRE 568 (609)
Q Consensus 554 t---~~a~~fYe-k-~GF~~ 568 (609)
+ ++..+||- | -|+..
T Consensus 415 sr~~n~~~~Wyf~rs~G~~~ 434 (467)
T 3s6k_A 415 SRHNNQVNIFYYAESDGCIK 434 (467)
T ss_dssp ECSSCTTHHHHHHHCSEEEE
T ss_pred eCCCCCccceEEeeeeEEEE
Confidence 6 36677773 3 36543
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=412.77 Aligned_cols=280 Identities=27% Similarity=0.374 Sum_probs=255.4
Q ss_pred CchhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccc
Q 007275 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY 156 (609)
Q Consensus 78 ~~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~ 156 (609)
+...+|+++||+|+|||++||++++|||+||++|++++ ++.++++|+.|++.|+++||||||||+++.+++++++++++
T Consensus 4 ~~~~~~~~~~~~a~pyi~~~~~k~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~ 83 (299)
T 2ap9_A 4 LPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDF 83 (299)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCC
T ss_pred CChhhHHHHHHHHHHHHHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCcccc
Confidence 34688999999999999999999999999999999865 67999999999999999999999999999999999999999
Q ss_pred cCCccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCc---ccCcCCcc
Q 007275 157 LGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGA 232 (609)
Q Consensus 157 ~~g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~---~~~~d~g~ 232 (609)
.+|.|+|+...++++ ++++|++|..+++.| +++|++ ++++++.++++++++++++ .+++|+||
T Consensus 84 ~~g~R~t~~~~l~~~~~~~~G~l~~~l~~~L---------~~~g~~----av~lt~~d~~~~~~~~~~~~~~~~~~d~g~ 150 (299)
T 2ap9_A 84 KGGFRVTTPEVLDVARMVLFGQVGRELVNLI---------NAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGL 150 (299)
T ss_dssp SSSSCCBCHHHHHHHHHHHHHTHHHHHHHHH---------TTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBS
T ss_pred cCCcccCCHHHHHHHHHHHhhHHHHHHHHHH---------HhCCCC----ceEechhHCCEEEEEecccccccccCCCCc
Confidence 999999999999998 778999999998864 678877 8999999999999988764 24679999
Q ss_pred eeeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC---C-CCccccccC
Q 007275 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLT 308 (609)
Q Consensus 233 ~G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~---~-~~~lI~~it 308 (609)
+|+|..++.+.|+.||+.|.|||++|++.+.+|+.+++|+|.+|+.+|.+|+||+|+|+|||||++ | ++++|++++
T Consensus 151 ~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~~~~~i~~is 230 (299)
T 2ap9_A 151 VGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEID 230 (299)
T ss_dssp EEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEE
T ss_pred ceeEEEecHHHHHHHHhCCCeEEECCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCCCCcChhhcC
Confidence 999999999999999999999999999888899999999999999999999999999999999984 2 589999999
Q ss_pred HHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccc
Q 007275 309 LQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAI 388 (609)
Q Consensus 309 ~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~ 388 (609)
.+|+++++. +++| |
T Consensus 231 ~~e~~~l~~-------------------------------------------------------~~~g-g---------- 244 (299)
T 2ap9_A 231 TGTLAQLLP-------------------------------------------------------TLEL-G---------- 244 (299)
T ss_dssp HHHHHHHGG-------------------------------------------------------GSCT-T----------
T ss_pred HHHHHHHHH-------------------------------------------------------hhcC-c----------
Confidence 998887742 2234 5
Q ss_pred cccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccccc
Q 007275 389 GGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (609)
Q Consensus 389 g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~ 447 (609)
|.+|++||..|++.|+++++|+||+.+++||.++|++++.||+|.++.
T Consensus 245 -----------M~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~~ 292 (299)
T 2ap9_A 245 -----------MVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGE 292 (299)
T ss_dssp -----------THHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECCC
T ss_pred -----------hHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecCC
Confidence 999999999999999999999999999998899999999999998764
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-49 Score=409.65 Aligned_cols=279 Identities=28% Similarity=0.457 Sum_probs=253.9
Q ss_pred hhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccC
Q 007275 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (609)
Q Consensus 80 ~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~ 158 (609)
..+|+++||+++|||++||++++|||+||++|++++ +..++++|+.|++.|+++||||||||+++.+++++++++++.+
T Consensus 7 ~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~ 86 (300)
T 2buf_A 7 AAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFID 86 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSS
T ss_pred hHHHHHHHHHHhHHHHHhcCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccC
Confidence 358999999999999999999999999999999876 7899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcc--c-------Cc
Q 007275 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV--D-------GV 228 (609)
Q Consensus 159 g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~--~-------~~ 228 (609)
|.|+|++++|+.+ ++++|++++.|++. |+++|++ ++++++.|++|+.+++.+.. + ++
T Consensus 87 g~rvt~~~~l~~~~~~~~G~~~~~l~~~---------l~~~g~~----a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (300)
T 2buf_A 87 GMRVTDAATMDVVEMVLGGQVNKDIVNL---------INRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEII 153 (300)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CC
T ss_pred CeecCCHHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----EEEecCCCCCeeeeeeccccccchhhcccccc
Confidence 9999999999998 66789999999986 4788987 89999999999999876432 2 34
Q ss_pred CCcceeeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC-CCcccccc
Q 007275 229 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFL 307 (609)
Q Consensus 229 d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~-~~~lI~~i 307 (609)
|++|+|+|+.+|.+.|+.||+.|.|||++|++.+.+|+.+++|+|.+|+++|.+|+||+|+|+|||||++. ++++|+++
T Consensus 154 d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~~a~~i~~i 233 (300)
T 2buf_A 154 DIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGL 233 (300)
T ss_dssp CCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEE
T ss_pred cCCcceeEEEECHHHHHHHHHCCCEEEEcCceeCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECCCCcChhhC
Confidence 89999999999999999999999999999998889999999999999999999999999999999999964 69999999
Q ss_pred CHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccccc
Q 007275 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (609)
Q Consensus 308 t~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~ 387 (609)
+.+|+++++..+. .+| |
T Consensus 234 ~~~e~~~~~~~~~-----------------------------------------------------~~g-g--------- 250 (300)
T 2buf_A 234 STEQVNELIADGT-----------------------------------------------------IYG-G--------- 250 (300)
T ss_dssp CHHHHHHHHHTTC-----------------------------------------------------SCT-T---------
T ss_pred CHHHHHHHHHcCC-----------------------------------------------------CCC-c---------
Confidence 9999988864321 123 5
Q ss_pred ccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 388 ~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||+||..|+++|+++++|+||+.+++||.++|++++.||+|.++
T Consensus 251 ------------M~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 297 (300)
T 2buf_A 251 ------------MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297 (300)
T ss_dssp ------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECC
T ss_pred ------------cHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeC
Confidence 99999999999999999999999999998889999999999999864
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=413.42 Aligned_cols=282 Identities=27% Similarity=0.423 Sum_probs=250.7
Q ss_pred CCCCCchhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCC
Q 007275 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGH 152 (609)
Q Consensus 74 ~g~~~~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~ 152 (609)
+|.++...+|+++||+|+|||++||+|++|||+||++|++++ +..++++|+.|++.|+++||||||||+++.+++++++
T Consensus 11 ~~~~~~~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~ 90 (298)
T 2rd5_A 11 TGNAPSPDYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNI 90 (298)
T ss_dssp -------CHHHHHHHHTHHHHHHTTTCEEEEEECTHHHHCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTC
T ss_pred cCCCCChHHHHHHHHHHHHHHHHhcCCEEEEEECchhhCChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCC
Confidence 466677789999999999999999999999999999998865 6899999999999999999999999999999999999
Q ss_pred cccccCCccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCc
Q 007275 153 EAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231 (609)
Q Consensus 153 ~~~~~~g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g 231 (609)
++++.+|.|+|+++.|+.+ ++++|++|..++.. |+++|++ ++++++.+++++.+++.+ +++|++
T Consensus 91 ~~~~~~g~R~t~~~~l~~~~~~~~G~~n~~l~~~---------l~~~g~~----a~~l~~~~~~~l~~~~~~--~~~d~g 155 (298)
T 2rd5_A 91 PAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSL---------INAAGAT----AVGLSGHDGRLLTARPVP--NSAQLG 155 (298)
T ss_dssp CCCEETTEECBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTSC----EEEEETTGGGCEEEEECT--THHHHB
T ss_pred CccccCCcccCCHHHHHHHHHHHhchHHHHHHHH---------HHhCCCC----ccccChHHCCEEEEEeCC--ccccCC
Confidence 9999999999999999998 66679999988886 5889987 899999999999988764 335899
Q ss_pred ceeeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC----CCcccccc
Q 007275 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFL 307 (609)
Q Consensus 232 ~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~----~~~lI~~i 307 (609)
|+|+++.+|.+.|+.||++|.|||++|++.+..|+.+++|+|.+|+++|.+|+||+|+|+|||||++. ++++|+++
T Consensus 156 ~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~~a~~i~~i 235 (298)
T 2rd5_A 156 FVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEI 235 (298)
T ss_dssp SEEEEEEECGGGHHHHHHTTCEEEEESEEECTTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSEESSSSCTTSEECEE
T ss_pred cceEEEEECHHHHHHHHhCCCEEEEcCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCCCCCCcccC
Confidence 99999999999999999999999999998888899999999999999999999999999999999843 38999999
Q ss_pred CHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccccc
Q 007275 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (609)
Q Consensus 308 t~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~ 387 (609)
+.+|+++++..+. .+| |
T Consensus 236 s~~e~~~~~~~g~-----------------------------------------------------~~g-G--------- 252 (298)
T 2rd5_A 236 DIKGVKKMIEDGK-----------------------------------------------------VAG-G--------- 252 (298)
T ss_dssp EHHHHHHHHHTTS-----------------------------------------------------SCT-T---------
T ss_pred CHHHHHHHHHCCC-----------------------------------------------------CCC-c---------
Confidence 9999988864321 133 5
Q ss_pred ccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 388 ~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|.+|++||..|+++|++++||+||+.+++||.++|++++.||+|.+
T Consensus 253 ------------M~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 253 ------------MIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp ------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred ------------hHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 9999999999999999999999999999887999999999999863
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=412.23 Aligned_cols=278 Identities=29% Similarity=0.468 Sum_probs=252.4
Q ss_pred hHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCC
Q 007275 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (609)
Q Consensus 81 ~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g 159 (609)
.+|+++||+|+|||++||++++|||+||++|++++ +..++++|+.|++.|+++||||||||+++.+++++++++++.+|
T Consensus 31 ~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g 110 (321)
T 2v5h_A 31 ADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNG 110 (321)
T ss_dssp CCHHHHHHHTHHHHHHTTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCBSSS
T ss_pred hhHHHHHHHHHHHHHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCccccCC
Confidence 47999999999999999999999999999998865 68999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEee
Q 007275 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (609)
Q Consensus 160 ~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~ 238 (609)
.|+|++.+|+.+ ++++|++|..|+.. |+++|++ ++++++.+++++.+++.+ ++|++|+|+++.
T Consensus 111 ~Rvt~~~~l~~~~~~~~G~in~~l~~~---------L~~~g~~----a~gl~~~~a~~l~a~~~~---~~d~g~~g~v~~ 174 (321)
T 2v5h_A 111 LRVTDADTMEVVEMVLVGRVNKDIVSR---------INTTGGR----AVGFCGTDGRLVLARPHD---QEGIGFVGEVNS 174 (321)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHHTCC----EEEECTTGGGSEEEEECS---SCSSBSBEEEEE
T ss_pred cccCCHHHHHHHHHHHhChHHHHHHHH---------HHhCCCC----eeeeChhhccEEEeecCC---CccccccceeEE
Confidence 999999999998 67789999999886 5788987 899999999999998764 368999999999
Q ss_pred eCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC----CCccccccCHHHHHH
Q 007275 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADS 314 (609)
Q Consensus 239 v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~----~~~lI~~it~~e~~~ 314 (609)
+|.+.|++||+.|.|||++|++.+.+|+.+++|+|.+|+++|.+|+||+|+|+|||||++. ++++|++++.+|+++
T Consensus 175 v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~~a~~i~~is~~e~~~ 254 (321)
T 2v5h_A 175 VNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRE 254 (321)
T ss_dssp ECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTCTTCBCCEEEHHHHHH
T ss_pred ecHHHHHHHHHCCCeEEEeCceECCCCCEEEeCHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCCCCeeeeEEcHHHHHH
Confidence 9999999999999999999998888999999999999999999999999999999999853 489999999999988
Q ss_pred HHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchh
Q 007275 315 LIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERL 394 (609)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~ 394 (609)
++..+ ..+| |
T Consensus 255 l~~~g-----------------------------------------------------~~~g-G---------------- 264 (321)
T 2v5h_A 255 LIAQG-----------------------------------------------------IVGG-G---------------- 264 (321)
T ss_dssp HHHTT-----------------------------------------------------SSCT-T----------------
T ss_pred HHhCC-----------------------------------------------------CCcC-c----------------
Confidence 86432 1133 5
Q ss_pred hcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccccccc
Q 007275 395 SRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449 (609)
Q Consensus 395 ~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~ 449 (609)
|.+|++||..|+++|+++++|+||+.+++||.++|++++.||+|.++.|+
T Consensus 265 -----M~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~~~~~ 314 (321)
T 2v5h_A 265 -----MIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314 (321)
T ss_dssp -----HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEECC---
T ss_pred -----HHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCCceEEECCccc
Confidence 99999999999999999999999999998889999999999999988774
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=399.60 Aligned_cols=276 Identities=28% Similarity=0.452 Sum_probs=250.0
Q ss_pred hHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCC
Q 007275 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (609)
Q Consensus 81 ~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g 159 (609)
.+|+++||+++|||++||++++|||+||+++++++ +..++++|+.|++.|+++||||||||+++.+++++++++++.+|
T Consensus 3 ~~~~~~~~~~~pyi~~~~~~~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~~~~~~~~g 82 (282)
T 2bty_A 3 IDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNG 82 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSS
T ss_pred hHHHHHHHHHHHHHHHhcCCeEEEEECchhhCChhHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCCccccCC
Confidence 47999999999999999999999999999998865 78999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEee
Q 007275 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (609)
Q Consensus 160 ~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~ 238 (609)
.|+|++.+|+.+ ++++|++|..+++. |+++|++ ++++++.+++++.+++.++ +.|++|+|+++.
T Consensus 83 ~r~t~~~~l~~~~~~~~G~~~~~l~~~---------l~~~g~~----a~~l~~~~~~~l~~~~~~~--~~d~g~~g~v~~ 147 (282)
T 2bty_A 83 HRVTDEKTMEIVEMVLVGKINKEIVMN---------LNLHGGR----AVGICGKDSKLIVAEKETK--HGDIGYVGKVKK 147 (282)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHTTTCC----EEEEETTGGGSEEEEECCT--TCCCBSBEEEEE
T ss_pred cccCCHHHHHHHHHHHhhHHHHHHHHH---------HHhCCCC----ceecChhhCCEEEEecCCc--ccCCCcceEEEE
Confidence 999999999997 66689999998886 5788887 8999999999999887654 458999999999
Q ss_pred eCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCCCccccccCHHHHHHHHHh
Q 007275 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 239 v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~~~lI~~it~~e~~~l~~~ 318 (609)
+|.+.|++||++|.|||++|++.+..|+.+++|+|.+|+++|.+|+||+|+|+|||||++.+.++|++++.+|+++++..
T Consensus 148 ~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~~~~i~~i~~~e~~~~~~~ 227 (282)
T 2bty_A 148 VNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTT
T ss_pred ecHHHHHHHHHCCCEEEECCCccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeecCchhhhhCCHHHHHHHHHc
Confidence 99999999999999999999988888999999999999999999999999999999998532299999999998887532
Q ss_pred hchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhccc
Q 007275 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (609)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~ 398 (609)
+ ..+| |
T Consensus 228 g-----------------------------------------------------~~~g-G-------------------- 233 (282)
T 2bty_A 228 G-----------------------------------------------------TVTG-G-------------------- 233 (282)
T ss_dssp T-----------------------------------------------------CSCT-T--------------------
T ss_pred C-----------------------------------------------------CCCC-c--------------------
Confidence 1 1134 5
Q ss_pred CCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 399 ~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+|++||..|+++|+++++|+||+.+++|+.++|++++.||+|.++
T Consensus 234 -M~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 280 (282)
T 2bty_A 234 -MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp -HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred -HHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCCCceEEEeC
Confidence 99999999999999999899999999998889999999999999764
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=383.11 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=228.4
Q ss_pred HHHhhhhHHhhcC----CeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccC
Q 007275 87 FREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (609)
Q Consensus 87 ~r~a~pyi~~~~~----k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rv 162 (609)
.||+.|||++||+ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+|+
T Consensus 32 ~re~~~yi~~f~~~~~~~~iViK~GGsv~~~-~~~~~~~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~~~~G~Rv 110 (307)
T 3zzh_A 32 KREVEQYLKYFTSVSQQQFAVIKVGGAIISD-NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRI 110 (307)
T ss_dssp HHHHHHHHHHHHCCCCSCCEEEEECHHHHHH-SHHHHHHHHHHHHHBTCCEEEEECCHHHHHHHHHHTTCCCCEETTEEC
T ss_pred hhhHHHHHHHHhCCCCCCEEEEEEChHHhhc-hHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHcCCCccccCCeec
Confidence 5679999999999 89999999999875 589999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHH
Q 007275 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (609)
Q Consensus 163 t~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~ 242 (609)
|++++|+++.++.+.+|..|++. |+++|++ ++++++ +++++++ ++++|+||+|+|+.+|.+
T Consensus 111 Td~~~l~vv~m~~~~vn~~lv~~---------L~~~G~~----Av~l~g---g~~~a~~---~~~~d~g~~G~i~~v~~~ 171 (307)
T 3zzh_A 111 TDEHTMAVVRKCFLEQNLKLVTA---------LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKE 171 (307)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS---SSEEEEE---SCHHHHBSBEEEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----eeEEcC---CcEEEEe---cCccccCccccccccCHH
Confidence 99999999965567899999876 5889988 888874 4557776 466799999999999999
Q ss_pred HHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC--CCCccccccCHHH-HHHHHHhh
Q 007275 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQR 319 (609)
Q Consensus 243 ~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~--~~~~lI~~it~~e-~~~l~~~~ 319 (609)
.|+.+|++|+|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||||++ +++++|++++..| ++.++..+
T Consensus 172 ~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~~~~~~i~~i~~~e~~~~l~~~~ 251 (307)
T 3zzh_A 172 PIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQS 251 (307)
T ss_dssp HHHHHHHHTCEEEECCCEECTTCBEEBCCHHHHHHHHHHHHCCSEEEEECSSCSCEETTTTEECCEEEHHHHHHHHHTST
T ss_pred HHHHHHHCCCEEEEeCCeECCCCcEEecCHHHHHHHHHHhCCCCEEEEEeCCcceecCCCCcCCcccCHHHHHHHHHhCC
Confidence 99999999999999999988889999999999999999999999999999999985 5899999999875 56665321
Q ss_pred chhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccC
Q 007275 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (609)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~ 399 (609)
+.+| |
T Consensus 252 -----------------------------------------------------~~tG-G--------------------- 256 (307)
T 3zzh_A 252 -----------------------------------------------------WVKY-G--------------------- 256 (307)
T ss_dssp -----------------------------------------------------TSCH-H---------------------
T ss_pred -----------------------------------------------------CCCC-c---------------------
Confidence 1123 4
Q ss_pred CHHHHHHHHHHHHc---CCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 400 YLSELAAAAFVCRR---GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 400 m~~kl~aa~~a~~~---Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||+||..|++. |. .++|++ +++++.|||++++.||+|.+.
T Consensus 257 M~~Kl~aa~~a~~~v~~g~-~v~I~~---~~~ll~elft~~g~GT~I~~~ 302 (307)
T 3zzh_A 257 TKLKIREIKELLDYLPRSS-SVAIIN---VQDLQKELFTDSGAGTMIRRG 302 (307)
T ss_dssp HHHHHHHHHHHHHHSCTTC-CEEEEC---GGGHHHHHHSCCCCSEEEECC
T ss_pred HHHHHHHHHHHHHHhccCe-EEEEeC---ccHHHHHHhcCCCCcEEEecC
Confidence 99999965555444 64 599998 677899999999999999875
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=365.11 Aligned_cols=233 Identities=26% Similarity=0.345 Sum_probs=215.7
Q ss_pred CeEEEEeCCcccCCCChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-HHHHHHH
Q 007275 100 GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGI 178 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~g~i 178 (609)
|+||||+||+++++ .+++++++|+.|+..|+++||||||||+++..++++++++++.+|.|+|++++|+++ ++++|.+
T Consensus 37 k~iVIKiGGs~l~~-~~~~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~~~l~G~l 115 (279)
T 3l86_A 37 DIIVIKIGGVASQQ-LSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLV 115 (279)
T ss_dssp CEEEEEECTTGGGS-CCHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTT
T ss_pred ceEEEEEChHHHHh-HHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHHHHHHHHH
Confidence 79999999999986 478999999999999999999999999999999999999999999999999999998 6689999
Q ss_pred HHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcC
Q 007275 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (609)
Q Consensus 179 ~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~ 258 (609)
|..+++. |+++|++ ++++++.|++++++++. ++.||+++|+|+++|.+.|+.||++|+|||++|
T Consensus 116 n~~i~~~---------L~~~G~~----a~~l~g~dg~llta~~~---~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~ 179 (279)
T 3l86_A 116 GKNLQEK---------LRQAGVS----CQQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILAS 179 (279)
T ss_dssp HHHHHHH---------HHHTTCC----EEECSGGGGGTEEEEES---CHHHHBSBEEEEEECHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHH---------HHhCCCC----EEEEecCcCCEEEeecc---CccccCcccccchhhHHHHHHHHhCCcEEEECC
Confidence 9999986 5888988 89999999999999875 667999999999999999999999999999999
Q ss_pred CccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccc
Q 007275 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 338 (609)
Q Consensus 259 ~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~ 338 (609)
++.+.+|+.+|+|+|.+|+++|.+|+||+|||+|||||++.++++|++++.+|+++++..+
T Consensus 180 v~~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~d~~~I~~i~~~e~~~l~~~~------------------- 240 (279)
T 3l86_A 180 LGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTA------------------- 240 (279)
T ss_dssp EEECTTSCEEECCHHHHHHHHHHHTTCSEEEEECSSSSCEETTEECCEEEGGGSHHHHHTT-------------------
T ss_pred cEECCCCCEeecCHHHHHHHHHHHcCCCEEEEEeCCCccccCCEehhhccHHHHHHHHhCC-------------------
Confidence 9888899999999999999999999999999999999998899999999999888886431
Q ss_pred cccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeE
Q 007275 339 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 418 (609)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v 418 (609)
+.+| | |.+||+||..|++.|++++
T Consensus 241 ----------------------------------~~tG-G---------------------M~~Kl~aa~~a~~~Gv~~v 264 (279)
T 3l86_A 241 ----------------------------------VITA-G---------------------MIPKIESAAKTVAAGVGQV 264 (279)
T ss_dssp ----------------------------------SSCT-T---------------------HHHHHHHHHHHHHTTCSEE
T ss_pred ----------------------------------CCcC-c---------------------HHHHHHHHHHHHHcCCCEE
Confidence 1234 5 9999999999999999999
Q ss_pred EEeecc
Q 007275 419 HLLDGT 424 (609)
Q Consensus 419 ~i~~g~ 424 (609)
||+|+.
T Consensus 265 ~I~~~~ 270 (279)
T 3l86_A 265 LIGDNL 270 (279)
T ss_dssp EEESSS
T ss_pred EEeccC
Confidence 999964
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=324.35 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=224.3
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCC-eEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-HHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAG 176 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~-~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~g 176 (609)
+++|||+||+++++++ +++++++|+.+...|. ++|||||||++++.+++.+++++++.+|.|+|+.+.++.+ +++++
T Consensus 3 ~~~ViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg~~~~~ll~~~g~~~~~~~glr~t~~~~l~~~~~~l~~ 82 (258)
T 1gs5_A 3 NPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAG 82 (258)
T ss_dssp CCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHHT
T ss_pred ccEEEEEChhHhCChHHHHHHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHcCCCcceeCCEeeCCHHHHHHHHHHHhc
Confidence 5799999999999865 8899999998877665 5899999999999999999999889999999999999887 67888
Q ss_pred HHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEE
Q 007275 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (609)
Q Consensus 177 ~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi 256 (609)
.+|..+++. |+++|++ ++++++.+++|+++++.+ .|++++|+++.++.+.|+.+|++|.|||+
T Consensus 83 ~~n~~l~~~---------l~~~G~~----a~~l~~~~~~~~~~~~~~----~d~~~~g~~~~~~~~~i~~ll~~g~ipVi 145 (258)
T 1gs5_A 83 TANKTLLAW---------AKKHQIA----AVGLFLGDGDSVKVTQLD----EELGHVGLAQPGSPKLINSLLENGYLPVV 145 (258)
T ss_dssp HHHHHHHHH---------HHHTTCC----EEEECTTGGGCEEEEECC----GGGBSBEEEEECCCHHHHHHHHTTCEEEE
T ss_pred cchHHHHHH---------HHHCCCC----eEEEeecCCCEEEEEEcC----CCCCCcCceeEECHHHHHHHHHCCCEEEE
Confidence 999999875 5889988 899999999999998753 57899999999999999999999999999
Q ss_pred cCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhc
Q 007275 257 SNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAE 335 (609)
Q Consensus 257 ~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~ 335 (609)
+|++.+++|+++|+|+|.+|+++|.+|+|| |+|+|||||++ .++++|++++.+|+++++..+.
T Consensus 146 ~~~g~~~~g~~~~~~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d~~~i~~i~~~e~~~l~~~~~--------------- 209 (258)
T 1gs5_A 146 SSIGVTDEGQLMNVNADQAATALAATLGAD-LILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI--------------- 209 (258)
T ss_dssp CSEEECTTSCEEECCHHHHHHHHHHHHTCE-EEEEESSSSCBCTTSCBCCEECHHHHHHHHHTTC---------------
T ss_pred eCCcCCCCCcEEEecHHHHHHHHHHHhCCc-EEEEeCCCceECCCCCCCcccCHHHHHHHHhcCC---------------
Confidence 999999999999999999999999999999 99999999985 5799999999999988864321
Q ss_pred ccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCC
Q 007275 336 EDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGV 415 (609)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv 415 (609)
.+| | |.+|+.+|..+++.++
T Consensus 210 --------------------------------------~~g-G---------------------m~~k~~~a~~~~~~~~ 229 (258)
T 1gs5_A 210 --------------------------------------ITD-G---------------------MIVKVNAALDAARTLG 229 (258)
T ss_dssp --------------------------------------SCT-H---------------------HHHHHHHHHHHHHHHT
T ss_pred --------------------------------------CCC-c---------------------HHHHHHHHHHHHHhCC
Confidence 123 4 9999999999998655
Q ss_pred CeEEEeecccccchhhhhhhcCCCccccc
Q 007275 416 QRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 416 ~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.++||+|++.++. |.++|++++.||+|.
T Consensus 230 ~~v~I~~~~~~~~-l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 230 RPVDIASWRHAEQ-LPALFNGMPMGTRIL 257 (258)
T ss_dssp SCEEEEESSCGGG-HHHHHTTCCSSEEEC
T ss_pred CEEEEecCCCchH-HHHHhcCCCCcEEEe
Confidence 5799999999986 789999999999985
|
| >3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=324.76 Aligned_cols=242 Identities=12% Similarity=0.150 Sum_probs=188.2
Q ss_pred CCeEEEEeCCcccCCCC----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCC--ccCCCHH
Q 007275 99 GGTFVVIISGEIVSSPY----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR--YRITDSE 166 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g--~rvt~~~ 166 (609)
||++|||+||++|++++ +++++++|+.++ +.++||||||||+++.++++++++++|... +|. +..
T Consensus 2 ~k~iVIKlGG~~l~~~~~~~~~~~~~~l~~l~~~i~~l~--~~~~vlVhGGG~~~~~~~~~~gi~~~~~~~~g~~~-~~~ 78 (269)
T 3ll9_A 2 SHMIILKLGGSVITRKDSEEPAIDRDNLERIASEIGNAS--PSSLMIVHGAGSFGHPFAGEYRIGSEIENEEDLRR-RRF 78 (269)
T ss_dssp -CCEEEEECHHHHEECCSSSCEECHHHHHHHHHHHHHHC--CSSEEEEECCGGGTHHHHHHHTTTSCCCSHHHHHH-HHH
T ss_pred CCEEEEEEChhheecCccccccccHHHHHHHHHHHHHhc--CCCEEEEECCcHHHHHHHHHcCCCcccccCccccc-ccc
Confidence 68999999999998765 467888888775 689999999999999999999999887510 010 124
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHH
Q 007275 167 SLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRE 246 (609)
Q Consensus 167 ~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~ 246 (609)
.|.+....+..+|..+++. |+++|++ ++++++.+..+.. +|+++.+|.+.|+.
T Consensus 79 G~rvT~~~~~~ln~~l~~~---------L~~~G~~----a~~l~g~~~~~~~--------------~g~v~~v~~~~i~~ 131 (269)
T 3ll9_A 79 GFALTQNWVKKLNSHVCDA---------LLAEGIP----AVSMQPSAFIRAH--------------AGRISHADISLIRS 131 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGTEEEE--------------TTEEEEECCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHH---------HHHCCCc----EEEEcchHcCeEe--------------cCeeeeecHHHHHH
Confidence 4444433446888888876 5889988 8999998876554 57888999999999
Q ss_pred HHhCCCeEEEcC-CccCCC--CcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHH
Q 007275 247 RLDGGCLVILSN-LGYSSS--GEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (609)
Q Consensus 247 LL~~G~IPVi~~-~~~~~~--ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~ 316 (609)
+|+.|+|||++| .+.+.+ |+++|+|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++..|+++++
T Consensus 132 lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l 211 (269)
T 3ll9_A 132 YLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESL 211 (269)
T ss_dssp HHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-------
T ss_pred HHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHh
Confidence 999999999998 666777 8999999999999999999999999999999984 457789999998886665
Q ss_pred HhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhc
Q 007275 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (609)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~ 396 (609)
... ++.+.+| |
T Consensus 212 ~~~--------------------------------------------------~~~~~tg-G------------------ 222 (269)
T 3ll9_A 212 DGT--------------------------------------------------LNTDVTG-G------------------ 222 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc--------------------------------------------------CCCcCcC-C------------------
Confidence 321 1122344 4
Q ss_pred ccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCC-ccccc
Q 007275 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMVA 444 (609)
Q Consensus 397 ~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~-GT~i~ 444 (609)
|.+||+||..||++|+ ++||+||+.+++|+ ++|++++. ||+|.
T Consensus 223 ---M~~Kl~aa~~a~~~Gv-~v~I~~g~~~~~l~-~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 223 ---MVGKIRELLLLAEKGV-ESEIINAAVPGNIE-RALLGEEVRGTRIT 266 (269)
T ss_dssp ----SHHHHHHHHHHHTTC-CEEEEESSSTTHHH-HHHHTCCCSSEEC-
T ss_pred ---cHHHHHHHHHHHhCCC-eEEEEeCCCchHHH-HHHCCCCCCcEEEE
Confidence 9999999999999999 69999999999764 99999999 99986
|
| >2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=324.67 Aligned_cols=258 Identities=19% Similarity=0.164 Sum_probs=209.8
Q ss_pred cCCeEEEEeCCcccC--CC---------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHH
Q 007275 98 RGGTFVVIISGEIVS--SP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSE 166 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~--~~---------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~ 166 (609)
+++++|||+||++|+ ++ .++.++++|+.|+..|+++|||||||++++.+++++++++++ |++.
T Consensus 3 ~~~~iVIKlGGs~l~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~~~~~~------t~~~ 76 (316)
T 2e9y_A 3 SGRLAVIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPE------RPRQ 76 (316)
T ss_dssp -CCEEEEECCHHHHSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHTSCTT------SCCC
T ss_pred CCCEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcCCCCCC------CCHH
Confidence 468999999999998 52 257899999999999999999999999999999999988754 6777
Q ss_pred HHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCc----ceeEEEeecCCceeeeeec-Cc-cc-------CcCCcc
Q 007275 167 SLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLAAKRK-GV-VD-------GVDYGA 232 (609)
Q Consensus 167 ~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~----~~av~l~~~d~~~l~ak~~-~~-~~-------~~d~g~ 232 (609)
+|+.+ ++++|++++.|++.|+. .|.++|++++ +.++++++.|++|.++++. |. ++ ..+++|
T Consensus 77 ~l~~~~~~~~G~i~~~l~~~l~~-----~l~~~g~~a~~~~v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~ 151 (316)
T 2e9y_A 77 PLYIATAMTQAWIGLLLKHSLEE-----ELRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGW 151 (316)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCCCEECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH-----HHHhcCCCccccceeeEEEeccccccccccccccccccchhhhhhhhhhcce
Confidence 88887 67899998777777643 6788998743 4458999999998886642 32 21 124555
Q ss_pred e--ee--------------EeeeCHHHHHHHHhCCCeEEEc-----CCccCCCC----cEEEecHHHHHHHHHHHcCCCE
Q 007275 233 T--GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSG----EVLNCNTYEVATACALAIEADK 287 (609)
Q Consensus 233 ~--G~--------------v~~v~~~~I~~LL~~G~IPVi~-----~~~~~~~g----e~~~id~D~lAa~lA~~L~Ad~ 287 (609)
+ |. ++.++.+.|++||++|+|||++ |++.+.+| +.+|+|+|++|+++|.+|+||+
T Consensus 152 ~~~~~~g~g~r~vv~sp~~i~~v~~~~i~~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~ 231 (316)
T 2e9y_A 152 VFKRDPRGGFRRVVPSPRPVSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADL 231 (316)
T ss_dssp EEEECTTSSEEEEECCCCEEEETTHHHHHHHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSE
T ss_pred eeeccccccceecccCCCcceeehHHHHHHHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCE
Confidence 4 43 6778999999999999999998 55556777 5677899999999999999999
Q ss_pred EEEEecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCccccc
Q 007275 288 LICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSER 362 (609)
Q Consensus 288 LIiLTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (609)
|||+|||||++ |++++|++++.+|+++++..+
T Consensus 232 LiilTdVdGVy~dp~~p~a~~i~~i~~~e~~~~~~~g------------------------------------------- 268 (316)
T 2e9y_A 232 LVILTDVPGVAVNYGREGERWLRRAAASELKKYLREG------------------------------------------- 268 (316)
T ss_dssp EEEEESSSSCEETTTSTTCEECSEEEHHHHHHHHHTT-------------------------------------------
T ss_pred EEEEeCchHhhCCCCCCCCcCCcEEcHHHHHHHHhcC-------------------------------------------
Confidence 99999999984 368999999999998886432
Q ss_pred ccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccc
Q 007275 363 RIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 442 (609)
Q Consensus 363 ~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~ 442 (609)
.+++| | |.+||+||..|+++|++++||++ ++. |.++|++ +.||+
T Consensus 269 ---------~~~~G-g---------------------M~~Kv~aa~~a~~~gv~~v~I~~---~~~-l~~~l~g-~~GT~ 312 (316)
T 2e9y_A 269 ---------HFPPG-S---------------------MGPKVEAAISFVERTGKPAVIGS---LEE-ARQVLSL-QAGTV 312 (316)
T ss_dssp ---------CSCTT-T---------------------HHHHHHHHHHHHHHHCSCEEEEE---STT-HHHHHTT-SSSEE
T ss_pred ---------CCCCC-C---------------------HHHHHHHHHHHHHcCCCeEEECc---HHH-HHHHHcC-CCCeE
Confidence 13344 5 99999999999999998899997 332 7789986 89999
Q ss_pred ccc
Q 007275 443 VAS 445 (609)
Q Consensus 443 i~~ 445 (609)
|.+
T Consensus 313 i~~ 315 (316)
T 2e9y_A 313 VML 315 (316)
T ss_dssp EEC
T ss_pred Eec
Confidence 964
|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=315.34 Aligned_cols=240 Identities=13% Similarity=0.106 Sum_probs=194.9
Q ss_pred hhcCCe-EEEEeCCcccCCCC---------hHHHHHHHHHHHhCC------CeEEEEECChHHHhHHHHHcCCccc----
Q 007275 96 AHRGGT-FVVIISGEIVSSPY---------LDPILKDIAFLHHLG------IRFVLVPGTHVQIDKLLSERGHEAK---- 155 (609)
Q Consensus 96 ~~~~k~-iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G------~~vVLVhGgG~~i~~~l~~~g~~~~---- 155 (609)
.|||++ +|||+||++|++++ +++++++|+.|+..| .++|||||||++++.+++++|++++
T Consensus 2 ~~~~~m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~~~~lgi~~~~~~~ 81 (266)
T 3k4o_A 2 SHGGSMLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYLKIEDGKKI 81 (266)
T ss_dssp -----CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHGGGEEECSSSEE
T ss_pred CCCCceEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchHHHHHHHHHcCCCcccCcc
Confidence 478876 99999999999862 789999999998888 9999999999999999999999876
Q ss_pred cc---CCccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcc
Q 007275 156 YL---GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232 (609)
Q Consensus 156 ~~---~g~rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~ 232 (609)
+. .|.|+|+. ++..+|..+++. |+++|++ ++++++.|..+..
T Consensus 82 ~~~~~~G~r~T~~--------a~~~ln~~l~~~---------l~~~G~~----a~~l~~~d~~~~~-------------- 126 (266)
T 3k4o_A 82 FINMEKGFWEIQR--------AMRRFNNIIIDT---------LQSYDIP----AVSIQPSSFVVFG-------------- 126 (266)
T ss_dssp ECCHHHHHHHHHH--------HHHHHHHHHHHH---------HHTTTCC----EEEECGGGTCEES--------------
T ss_pred cccccCceeHHHH--------HHHHHHHHHHHH---------HHHCCCc----EEEeeHHHcCccc--------------
Confidence 54 44454443 334688888775 5788987 8888887765543
Q ss_pred eeeEeeeCHHHHHHHHhCCCeEEEcC-CccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCCCccccccCHHH
Q 007275 233 TGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQE 311 (609)
Q Consensus 233 ~G~v~~v~~~~I~~LL~~G~IPVi~~-~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~~~lI~~it~~e 311 (609)
.| +.+|.+.|+.+|+.|.|||++| .+.++.++++|+|+|.+|+++|.+|+||+|+|+|||||++.|+++|++++..|
T Consensus 127 ~g--~~v~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~d~~~i~~~~~~e 204 (266)
T 3k4o_A 127 DK--LIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVLIDNKPIKRIDKNN 204 (266)
T ss_dssp SS--CBCCCHHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSBSSSSBCSEECTTT
T ss_pred Cc--eEecHHHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEEeCCeecCcCCHHH
Confidence 12 4678899999999999999998 66777888999999999999999999999999999999988899999999887
Q ss_pred HHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccccccccc
Q 007275 312 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 391 (609)
Q Consensus 312 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~ 391 (609)
+++++..-. +.++++.+| |
T Consensus 205 ~~~l~~~~~-----------------------------------------------~~~~~~~tG-G------------- 223 (266)
T 3k4o_A 205 IYKILNYLS-----------------------------------------------GSNSIDVTG-G------------- 223 (266)
T ss_dssp HHHHHHHHH-----------------------------------------------STTCSCCSS-H-------------
T ss_pred HHHHHHHhc-----------------------------------------------cccCCcccC-C-------------
Confidence 777764310 012233444 4
Q ss_pred chhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 392 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 392 ~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||++|..||+ ++||+||+.++. |.++|+++++||+|.+.
T Consensus 224 --------M~~Kv~aa~~a~~----~v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 224 --------MKYKIEMIRKNKC----RGFVFNGNKANN-IYKALLGEVEGTEIDFS 265 (266)
T ss_dssp --------HHHHHHHHHHTTC----EEEEEETTSTTH-HHHHHTTCCCSEEEECC
T ss_pred --------HHHHHHHHHHHhc----CEEEEeCCCccH-HHHHhCCCCCceEEEeC
Confidence 9999999999997 799999999996 78999999999999863
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-37 Score=318.57 Aligned_cols=258 Identities=17% Similarity=0.182 Sum_probs=206.3
Q ss_pred CCeEEEEeCCcccCC---------CChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSS---------PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~---------~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
+|++|||+||++|++ +.++.++++|+.|++.|+++|||||||++++.+++++++++++ +|+.++|+
T Consensus 2 ~k~iVIKlGGs~l~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~~~~~~~-----~~~~~~l~ 76 (310)
T 2we5_A 2 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSE-----KNPAMPLD 76 (310)
T ss_dssp CCEEEEECCGGGGCCSSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTCSS-----SSCCCCHH
T ss_pred CcEEEEEEChHHhcCCCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHcCCCCCC-----CCCHHHHH
Confidence 579999999999986 2367899999999999999999999999999999999987654 46888899
Q ss_pred HH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCccee----EEEeecCCceee-eeecCcc-cCc--------------
Q 007275 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE----VGVSVASGNFLA-AKRKGVV-DGV-------------- 228 (609)
Q Consensus 170 ~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~a----v~l~~~d~~~l~-ak~~~~~-~~~-------------- 228 (609)
.+ ++++|.+++.+.++|+. .|...|+++++.. .+++..|++|.. +++.|.+ .+.
T Consensus 77 ~~~a~~~G~l~~~i~~al~~-----~l~~~g~~~~v~~~l~~~~v~~~d~~f~~~~~~vg~~~t~~da~~l~~~~~~~~~ 151 (310)
T 2we5_A 77 TCVAMTQGSIGYWLSNALNQ-----ELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKE 151 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCHHHHSCCEEEEEEECHHHHHHHHTTTCCEEE
T ss_pred HHHHHhhhHHHHHHHHHHHH-----HHHhcCCchhhHhhhhhhcccccchhhcccCceeEEeccHHHHHHHHhccccccc
Confidence 98 79999999888876533 5677887754433 567777766532 2333321 111
Q ss_pred --CCcce---e---eEeeeCHHHHHHHHhCCCeEEEc-----CC-ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecc
Q 007275 229 --DYGAT---G---EVKKVDVTRMRERLDGGCLVILS-----NL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (609)
Q Consensus 229 --d~g~~---G---~v~~v~~~~I~~LL~~G~IPVi~-----~~-~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDv 294 (609)
..+|. | +++.++.+.|+.||++|+|||++ |+ +.+..|+++|+|+|++|+++|.+|+||+|+|+|||
T Consensus 152 ~~~~~~~~vv~sp~~i~~v~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdV 231 (310)
T 2we5_A 152 DAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGV 231 (310)
T ss_dssp CTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSC
T ss_pred cCCcceeeccCCcccceeehHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCc
Confidence 22443 2 56779999999999999999999 54 44567889999999999999999999999999999
Q ss_pred cccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccC
Q 007275 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (609)
Q Consensus 295 dgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (609)
||++ |++++|++++.+|+++++..+.
T Consensus 232 dGVy~dp~~~~a~~i~~i~~~e~~~~~~~g~------------------------------------------------- 262 (310)
T 2we5_A 232 DYVCINYGKPDEKQLTNVTVAELEEYKQAGH------------------------------------------------- 262 (310)
T ss_dssp SSCEESTTSTTCEECCEEEHHHHHHHHHTTC-------------------------------------------------
T ss_pred hHhhCCCCCCCCeECCEEcHHHHHHHhhCCC-------------------------------------------------
Confidence 9984 3699999999999988864321
Q ss_pred CcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCC-eEEEeecccccchhhhhhhcCCCccccc
Q 007275 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ-RVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 370 ~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~-~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+++| | |.+||+||..|++.|+. ++||++ ++. |.++|++++.||+|.
T Consensus 263 ---~~~G-g---------------------M~~Kv~aa~~a~~~gv~~~v~I~~---~~~-l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 263 ---FAPG-S---------------------MLPKIEAAIQFVESQPNKQAIITS---LEN-LGSMSGDEIVGTVVT 309 (310)
T ss_dssp ---SCTT-T---------------------THHHHHHHHHHHHHSTTCEEEEEC---SGG-GGGCBTTBCCSEEEE
T ss_pred ---CCCC-C---------------------hHHHHHHHHHHHHcCCCceEEECc---HHH-HHHHHcCCCCCeEEe
Confidence 3334 5 99999999999999994 899997 333 778999999999985
|
| >1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=316.27 Aligned_cols=259 Identities=18% Similarity=0.206 Sum_probs=208.9
Q ss_pred CCeEEEEeCCcccC--CC---------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHH
Q 007275 99 GGTFVVIISGEIVS--SP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (609)
Q Consensus 99 ~k~iVIKlGGsvl~--~~---------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (609)
++++|||+||++|+ ++ .+++++++|+.|++.|+++||||||||+++..+.++++++++ + +++..+
T Consensus 2 ~k~iViK~GGsal~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~~~~~~~~-~---~~~~~~ 77 (314)
T 1e19_A 2 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQAT-Y---GIPAQP 77 (314)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHH-H---CCCCCC
T ss_pred CCEEEEEEChHHhcCCCCccchhhhHHHHHHHHHHHHHHHHCCCeEEEEeCChHHHhHHHHhccCcccc-C---CCChhH
Confidence 58999999999999 43 257899999999999999999999999999999999887765 2 567778
Q ss_pred HHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCC----cceeEEEeecCCceeeeeec-C-cccC-------cCCcce
Q 007275 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSS----RWHEVGVSVASGNFLAAKRK-G-VVDG-------VDYGAT 233 (609)
Q Consensus 168 l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~----~~~av~l~~~d~~~l~ak~~-~-~~~~-------~d~g~~ 233 (609)
++++ ++.+|.+++.|++.|++ .|.++|+++ .+.++.+++.|++|..+++. | ++.. .|+||+
T Consensus 78 l~~~~a~~~G~i~~~l~~~l~~-----~l~~~gi~a~~~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~ 152 (314)
T 1e19_A 78 MDVAGAMSQGWIGYMIQQALKN-----ELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWI 152 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCE
T ss_pred HHHHHHHHhhHHHHHHHHHHHH-----HHHHcCCchhhhhhheeeeecccchhhccccccccceecHHHhhhhhhhcCcc
Confidence 8887 77899999888877654 688999875 23457889999888776543 2 2210 135543
Q ss_pred --ee--------------EeeeCHHHHHHHHhCCCeEEEc-----CCccCCC---CcEEEecHHHHHHHHHHHcCCCEEE
Q 007275 234 --GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLI 289 (609)
Q Consensus 234 --G~--------------v~~v~~~~I~~LL~~G~IPVi~-----~~~~~~~---ge~~~id~D~lAa~lA~~L~Ad~LI 289 (609)
|. ++.++.++|+.||++|+|||++ |++.+.+ |..+|+|+|.+|+++|.+|+||+|+
T Consensus 153 ~~g~~~~~~~~~v~s~~~i~~v~~~~i~~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li 232 (314)
T 1e19_A 153 VKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFM 232 (314)
T ss_dssp EEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEE
T ss_pred ccccccccccccccCcccceeehHHHHHHHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEE
Confidence 22 7789999999999999999998 6655554 5567899999999999999999999
Q ss_pred EEecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCccccccc
Q 007275 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (609)
Q Consensus 290 iLTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (609)
|+|||||++ |++++|++++.+|+++++..+.
T Consensus 233 ~lTdVdGvy~~~p~~~a~~i~~i~~~e~~~~~~~g~-------------------------------------------- 268 (314)
T 1e19_A 233 ILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH-------------------------------------------- 268 (314)
T ss_dssp EEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC--------------------------------------------
T ss_pred EeccCCEEECCCCCCCCeECCEECHHHHHHHHhCCC--------------------------------------------
Confidence 999999984 3699999999999988864321
Q ss_pred ccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+++| | |.+||++|..+++.|+.++||+++ + .|.++|++ +.||+|.
T Consensus 269 --------~~~G-g---------------------M~~Kv~aa~~~~~~~~~~v~I~~~--~--~l~~~~~g-~~GT~i~ 313 (314)
T 1e19_A 269 --------FKAG-S---------------------MGPKVLAAIRFIEWGGERAIIAHL--E--KAVEALEG-KTGTQVL 313 (314)
T ss_dssp --------SCTT-T---------------------HHHHHHHHHHHHHHTCSEEEEEEG--G--GHHHHHTT-SSSEEEE
T ss_pred --------cCCC-C---------------------hHHHHHHHHHHHHhCCCeEEEecH--H--HHHHHHcC-CCCeEEc
Confidence 2334 5 999999999999988888999985 2 37889986 6999986
Q ss_pred c
Q 007275 445 S 445 (609)
Q Consensus 445 ~ 445 (609)
+
T Consensus 314 ~ 314 (314)
T 1e19_A 314 P 314 (314)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=297.05 Aligned_cols=258 Identities=16% Similarity=0.169 Sum_probs=199.0
Q ss_pred CCeEEEEeCCcccCC--C--C-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHH
Q 007275 99 GGTFVVIISGEIVSS--P--Y-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~--~--~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (609)
+|++||+||||+|.. + . ++..+++|+.|.+.|++|||+||+|||++.++..+..... ..+..+
T Consensus 5 ~~~ivvalgGnal~~~g~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGPQVG~i~~~~~~~~~------~~~~~p 78 (317)
T 3kzf_A 5 GKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAG------VSPEMP 78 (317)
T ss_dssp CCEEEEECCSTTTC--CCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHSTTS------SSCCCC
T ss_pred CCEEEEEcChhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc------cCCCCC
Confidence 579999999999943 1 1 4678999999989999999999999999988766543321 235678
Q ss_pred HHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcce----eEEEeecCCceee-eeecCcc----------------
Q 007275 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV---------------- 225 (609)
Q Consensus 168 l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~----av~l~~~d~~~l~-ak~~~~~---------------- 225 (609)
|+.+ ++++|.|.++|+++|.+ .|.++|+..++. .+.++..|..|.+ .|+.|.+
T Consensus 79 ld~~~A~sqG~igy~l~~al~~-----~l~~~g~~~~v~t~itq~~Vd~~Dpaf~~PtKpiG~~y~~~ea~~~~~~~~~~ 153 (317)
T 3kzf_A 79 LHVCGAMSQGFIGYMMSQAMDN-----VFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGK 153 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEECC------------------
T ss_pred ccccCchhhHHHHHHHHHHHHH-----HHHhcCCCCceeEEEEEEEECCCCccccCCCCCcCCCCCHHHHHHHHHhccCC
Confidence 9988 89999999999888865 788888876554 4567788888876 4454521
Q ss_pred ---cCcCCcceee------EeeeCHHHHHHHHhCCCeEEEc-----CCccC---CCCcEEEecHHHHHHHHHHHcCCCEE
Q 007275 226 ---DGVDYGATGE------VKKVDVTRMRERLDGGCLVILS-----NLGYS---SSGEVLNCNTYEVATACALAIEADKL 288 (609)
Q Consensus 226 ---~~~d~g~~G~------v~~v~~~~I~~LL~~G~IPVi~-----~~~~~---~~ge~~~id~D~lAa~lA~~L~Ad~L 288 (609)
+....||... ++.||.++|+.||++|+|||++ |+..+ .+|..+|+|+|++|+++|.+|+||+|
T Consensus 154 ~~~ed~grg~RrvV~sP~P~~iVe~~~I~~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~L 233 (317)
T 3kzf_A 154 ILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYL 233 (317)
T ss_dssp --------CCCCEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCE
T ss_pred eEeecCCCCeeeecCCCCCcceECHHHHHHHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEE
Confidence 0011245553 3679999999999999997776 43332 23667799999999999999999999
Q ss_pred EEEecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccc
Q 007275 289 ICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERR 363 (609)
Q Consensus 289 IiLTDvdgv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (609)
||||||||++ +++++|++++.+|+++++.++
T Consensus 234 IiLTDVdGVy~dp~~p~a~~I~~it~~e~~~li~~g-------------------------------------------- 269 (317)
T 3kzf_A 234 MILTDVLNACINYKKPDERKLEEIKLSEILALEKDG-------------------------------------------- 269 (317)
T ss_dssp EECCSSSSCEESSSCSSCEECCEEEHHHHHHHHTTT--------------------------------------------
T ss_pred EEecCCCeeeCCCCCCCCeECcCcCHHHHHHHHhcC--------------------------------------------
Confidence 9999999984 578999999999998886431
Q ss_pred cccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 364 IATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 364 ~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
.|++| | |.+||+||..|++.|+.++||+|+. .+.++|+++ .||+|
T Consensus 270 --------~~~~G-G---------------------M~pKl~AA~~av~~gg~~v~I~s~~----~l~~~l~G~-~GT~I 314 (317)
T 3kzf_A 270 --------HFAAG-S---------------------MGPKVRAAIEFTQATGKMSIITSLS----TAVDALNGK-CGTRI 314 (317)
T ss_dssp --------SCC---C---------------------CHHHHHHHHHHHHHHCCCEEECCGG----GHHHHHTTS-SSEEE
T ss_pred --------CCCCC-C---------------------HHHHHHHHHHHHHcCCCeEEEcchH----HHHHHHCCC-CCeEE
Confidence 13334 4 9999999999999899899999963 356888766 89999
Q ss_pred ccc
Q 007275 444 ASD 446 (609)
Q Consensus 444 ~~d 446 (609)
.+|
T Consensus 315 ~~d 317 (317)
T 3kzf_A 315 IKD 317 (317)
T ss_dssp ECC
T ss_pred ecC
Confidence 875
|
| >4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=299.22 Aligned_cols=260 Identities=16% Similarity=0.190 Sum_probs=191.5
Q ss_pred CCeEEEEeCCcccCCCC------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-
Q 007275 99 GGTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA- 171 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~- 171 (609)
.|+||||+|||+|+++. ++.++++|+.|.+.|++|||||||||||+.++..++.......+ ++...++++
T Consensus 24 MkRIVIklGGnAL~~~~~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGPQVG~i~~~l~~~~~~~~~---~~~~~l~~~~ 100 (332)
T 4axs_A 24 MSRIVIALGGNALGDNPSQQKELVKIPAAKIAALIQEGHEVIVGHGNGPQVGMIFNAFADAKKANEK---TALVPFAEAG 100 (332)
T ss_dssp --CEEEEECGGGGCSSHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTTTTSC---CCCCCHHHHH
T ss_pred cceEEEEEChhhcCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHhccccCC---CCCchhHHHH
Confidence 36899999999998741 57789999999999999999999999999887776554443333 333445555
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcc----eeEEEeecCCceeee-eecCcc-----------------cCcC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRW----HEVGVSVASGNFLAA-KRKGVV-----------------DGVD 229 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~----~av~l~~~d~~~l~a-k~~~~~-----------------~~~d 229 (609)
+++++.+.+.|++.|.+ .|.++|+..++ .++.++..|..|.++ |+.|.. ....
T Consensus 101 a~tqg~ig~~l~~~l~~-----~l~~~gi~~~v~~~vtqv~V~~~D~af~~p~K~iG~~~~~~ea~~l~~~~~~~~~~~~ 175 (332)
T 4axs_A 101 GMSQGYIGYHMLTAISN-----ELKKLNIQKDVLYFLTQTIVDANDPAFKNPTKPVGPFYSSKEIAEANNPNSVIVEDAG 175 (332)
T ss_dssp HHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEECCCEEEECTTCHHHHSCCEECSCCCC--------CTTSCCC----
T ss_pred HHHHHHHHHHHHHHHHH-----HHHhcCCCcceeeeeeeeeecccchhhhCcCceeccccCHHHHHHHHhcCCEEEEccC
Confidence 67888888888887644 67788876433 356788888777653 333311 1122
Q ss_pred Cccee------eEeeeCHHHHHHHHhCCCeEEEcCCc--------cCCCCcEEEecHHHHHHHHHHHcCCCEEEEEeccc
Q 007275 230 YGATG------EVKKVDVTRMRERLDGGCLVILSNLG--------YSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295 (609)
Q Consensus 230 ~g~~G------~v~~v~~~~I~~LL~~G~IPVi~~~~--------~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvd 295 (609)
.||.+ .++.++.+.|+.|+++|+|||+++.+ ....|+.+|+|+|.+|++||.+|+||+||||||||
T Consensus 176 ~g~rrvV~sp~p~~ive~~~I~~L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~ 255 (332)
T 4axs_A 176 RGFRKVVASPIPVDFIGIDAIKQNVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVD 255 (332)
T ss_dssp ----CEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CCceEECCCCCCceeecHHHHHHhhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCC
Confidence 34443 44678999999999999998876432 22347778999999999999999999999999999
Q ss_pred ccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCC
Q 007275 296 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (609)
Q Consensus 296 gv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (609)
|++ |++++|++++.+|+++++.++.
T Consensus 256 gv~~~~~~~~~~~i~~it~~e~~~~~~~g~-------------------------------------------------- 285 (332)
T 4axs_A 256 YVYVDFNKPTQKALKTVDVKALNNFINQDQ-------------------------------------------------- 285 (332)
T ss_dssp SCEESTTSTTCEECSSCBHHHHHHHHHTTC--------------------------------------------------
T ss_pred ceEcCCCCcchhhcccCCHHHHHHHHHCCC--------------------------------------------------
Confidence 983 4578999999999999876521
Q ss_pred cccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 371 ~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|++| | |.|||+||..|++.|+.+++|+. ..+. +.+++.+ +.||+|.
T Consensus 286 --~~~G-g---------------------M~pKv~Aa~~~v~~g~g~~~iI~-~~~~--~~~~l~g-~~GT~Iv 331 (332)
T 4axs_A 286 --FAKG-S---------------------MLPKIKAAMGFVNGHPNRSAIIA-DLSK--VEDALKG-LSGTKII 331 (332)
T ss_dssp --SCTT-T---------------------THHHHHHHHHHHTTCTTCEEEEE-CSTT--HHHHTTT-SSSEEEB
T ss_pred --cCcC-C---------------------cHHHHHHHHHHHHhCCCcEEEEC-CHHH--HHHHHCC-CCCcEEe
Confidence 3344 4 99999999999999988777774 2333 5566654 5899985
|
| >3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=302.35 Aligned_cols=245 Identities=15% Similarity=0.169 Sum_probs=187.4
Q ss_pred hhHHhhcCCeEEEEeCCcccCCCC---------hHHHHHHHHHHHhCCC-eEEEEECChHHHhHHHHHcCCcccccCCcc
Q 007275 92 PYLWAHRGGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (609)
Q Consensus 92 pyi~~~~~k~iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~-~vVLVhGgG~~i~~~l~~~g~~~~~~~g~r 161 (609)
.||+.|++ ++|||+||++|++++ ++.++++|+.|++.|+ ++|||||||++++..++++++++.+.
T Consensus 17 ~~~~~~~~-~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~~~~~~l~~~~~~~~~~---- 91 (286)
T 3d40_A 17 RGSHMTPD-FLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFS---- 91 (286)
T ss_dssp CSTTSCCS-EEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCCC------------CCT----
T ss_pred hhhccCCC-EEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHcCCCcccc----
Confidence 58888864 999999999999763 7899999999999998 69999999999999998888765321
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCH
Q 007275 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (609)
Q Consensus 162 vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~ 241 (609)
+ ....+.++.++..+++. |.++|++ ++++++.+++| + + | | ++.++.
T Consensus 92 ----~--~~~~vt~g~l~~~l~~~---------l~~~G~~----a~~l~~~~~~~-t-~--------d----g-~~~~~~ 137 (286)
T 3d40_A 92 ----L--AGLTEATFEVKKRWAEK---------LRGIGVD----AFPLQLAAMCT-L-R--------N----G-IPQLRS 137 (286)
T ss_dssp ----T--HHHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGTEE-E-E--------T----T-EEEECC
T ss_pred ----h--hcchhhHHHHHHHHHHH---------HHHcCCc----EEEEEeecCCc-c-c--------C----C-eEEehH
Confidence 1 12345668888888886 5788987 78998888876 2 1 1 3 677888
Q ss_pred HHHHHHHhCCCeEEEcC-CccCCCCcEEEecHHHHHHHHHHH-cCCCEEEEEecccccC-C---CCccccccCHHHHHHH
Q 007275 242 TRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALA-IEADKLICIIDGPILD-E---SGHLIRFLTLQEADSL 315 (609)
Q Consensus 242 ~~I~~LL~~G~IPVi~~-~~~~~~ge~~~id~D~lAa~lA~~-L~Ad~LIiLTDvdgv~-~---~~~lI~~it~~e~~~l 315 (609)
+.|+.||++|.|||+++ .+.+.+|+++|+|+|.+|+++|.+ |+||+|+|+|||||++ . ++++|++|+..|++++
T Consensus 138 ~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~~a~~i~~is~~e~~~l 217 (286)
T 3d40_A 138 EVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPEQA 217 (286)
T ss_dssp SHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC---CEECCEEETTSCHHH
T ss_pred HHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCCCCcCCcccCHHHHHHH
Confidence 99999999999999998 667788889999999999999999 9999999999999985 2 3899999998877666
Q ss_pred HHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhh
Q 007275 316 IRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (609)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~ 395 (609)
++.-. ..++.+++| |
T Consensus 218 ~~~~~-----------------------------------------------~~~~~~~tg-g----------------- 232 (286)
T 3d40_A 218 YAALW-----------------------------------------------GSSEWDATG-A----------------- 232 (286)
T ss_dssp HHHHH-----------------------------------------------HSCC----C-H-----------------
T ss_pred HHhhc-----------------------------------------------cccCCcccC-c-----------------
Confidence 43210 011223344 4
Q ss_pred cccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhc-----CCC-ccccccc
Q 007275 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-----DGM-GTMVASD 446 (609)
Q Consensus 396 ~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~-----~g~-GT~i~~d 446 (609)
|.+|++||..|++.|++ ++|+||+.+++| .++|+. ..+ ||.|..+
T Consensus 233 ----M~~Kl~Aa~~a~~~gv~-v~I~~g~~p~~l-~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 233 ----MHTKLDALVTCARRGAE-CFIMRGDPGSDL-EFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp ----HHHHHHHHHHHHHTTCE-EEEEECCTTCCC-GGGGSCGGGSCTTCCCEEEEC-
T ss_pred ----HHHHHHHHHHHHHCCCc-EEEEeCCCCCcH-HHHhcCcccCcccccceeeeec
Confidence 99999999999999997 999999999975 899997 665 9999765
|
| >3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=284.69 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=174.4
Q ss_pred CeEEEEeCCcccCCCC---------hHHHHHHHHHHHhCCCeEE-EEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 100 GTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~~vV-LVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
|++|||+||+++++++ +++++++|+. |+++| ||||||++++..++++|+++.+++ ++...|.
T Consensus 4 k~iViKiGG~~l~~~~~~~~l~~~~l~~l~~~i~~----G~~vv~lVhGGG~~~~~~~~~~gi~~~~~~----~d~~gl~ 75 (249)
T 3ll5_A 4 TMMILKIGGSVITDKSAYRTARTYAIRSIVKVLSG----IEDLVCVVHGGGSFGHIKAMEFGLPGPKNP----RSSIGYS 75 (249)
T ss_dssp CCEEEEECHHHHBCTTSTTCBCHHHHHHHHHHHHT----CTTEEEEEECCGGGTHHHHHHHTCSEECCH----HHHHHHH
T ss_pred eEEEEEECccEEecCcccccchHHHHHHHHHHHhc----CCceEEEEECccHHHHHHHHHhCCCcCCCc----cccccHH
Confidence 7999999999998752 5566666653 99999 999999999999999999987643 5677788
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHh
Q 007275 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (609)
Q Consensus 170 ~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~ 249 (609)
++.+.+..+|..+++. |.++|++ ++++++.+.. ++|++ +.+.|+.||+
T Consensus 76 ~t~~~~~~ln~~~v~~---------l~~~G~~----a~~l~~~~~~----------------~~g~v---~~~~i~~ll~ 123 (249)
T 3ll5_A 76 IVHRDMENLDLMVIDA---------MIEMGMR----PISVPISALR----------------YDGRF---DYTPLIRYID 123 (249)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGSC----------------BSSSB---CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHCCCc----EEEEcHHHcc----------------cccEE---cHHHHHHHHH
Confidence 7755567999998865 5889987 7888776643 35555 8889999999
Q ss_pred CCCeEEEcCC-ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC-------CCccccccCHHHHHHHHHhhch
Q 007275 250 GGCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-------SGHLIRFLTLQEADSLIRQRVK 321 (609)
Q Consensus 250 ~G~IPVi~~~-~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~-------~~~lI~~it~~e~~~l~~~~~~ 321 (609)
+|.|||++|. ..+.+++++|+|+|.+|+++|.+|+||+|+|+|||||++. ++++|++++. ++....
T Consensus 124 ~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~~~~~~----- 197 (249)
T 3ll5_A 124 AGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-NITFDR----- 197 (249)
T ss_dssp TTCEEEEECEEEEEETTEEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-CC---------
T ss_pred CCCEEEECCCEEEcCCCceeeecHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-HHhccc-----
Confidence 9999999973 3344677899999999999999999999999999999842 3466777731 111100
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
.+.+.+| | |.
T Consensus 198 ------------------------------------------------~~~~~tG-g---------------------M~ 207 (249)
T 3ll5_A 198 ------------------------------------------------VQNDVTG-G---------------------IG 207 (249)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred ------------------------------------------------CCCeeEC-C---------------------HH
Confidence 1112334 4 99
Q ss_pred HHHHHHHHH-HHcCCCeEEEeecccccchhhhhhhcCCC-ccccc
Q 007275 402 SELAAAAFV-CRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMVA 444 (609)
Q Consensus 402 ~kl~aa~~a-~~~Gv~~v~i~~g~~~~~ll~el~~~~g~-GT~i~ 444 (609)
+||+||..+ +++|+ ++||+||+.+++|+. | .+++. ||+|.
T Consensus 208 ~Kl~aA~~a~~~~Gv-~v~I~~g~~~~~l~~-l-~g~~~~GT~i~ 249 (249)
T 3ll5_A 208 KKFESMVKMKSSVKN-GVYLINGNHPERIGD-I-GKESFIGTVIR 249 (249)
T ss_dssp HHHHHHHHHHTTCTT-CEEEEETTSGGGGGG-T-TSTTCCSEEEC
T ss_pred HHHHHHHHHHHhcCC-EEEEEeCCChhHHHH-h-CCCCCCCEEeC
Confidence 999999999 89999 699999999998777 5 46788 99974
|
| >2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=291.49 Aligned_cols=237 Identities=17% Similarity=0.237 Sum_probs=164.9
Q ss_pred CCeEEEEeCCcccCCC-------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH
Q 007275 99 GGTFVVIISGEIVSSP-------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~-------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
.+++|||+||++|+++ .+..++++|+.|++.|++||||||||++ ..+..++++.+ ..+...++++
T Consensus 4 ~k~iVIKiGGs~l~~~~~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~--~g~~~lg~~~~------~~~l~~~qa~ 75 (367)
T 2j5v_A 4 SQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIA--AGREHLGYPEL------PATIASKQLL 75 (367)
T ss_dssp CCEEEEEECHHHHTTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHH--HHHHHHTSCCC------CSSHHHHHHH
T ss_pred CCEEEEEECcHHhcCCCCCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHH--HHHHHcCCCCC------CCCHHHHHHH
Confidence 3799999999999974 2789999999999999999999999855 45678888652 3344455544
Q ss_pred -HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCH-HHHHHHHh
Q 007275 172 -MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLD 249 (609)
Q Consensus 172 -~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~-~~I~~LL~ 249 (609)
.+.+..++..+... |.++|++ +.++.....+| .++++.+|. ++|++||+
T Consensus 76 aavGq~~l~~~~~~~---------l~~~G~~----~~qvllt~~d~----------------~~~~r~~n~~~~i~~LL~ 126 (367)
T 2j5v_A 76 AAVGQSRLIQLWEQL---------FSIYGIH----VGQMLLTRADM----------------EDRERFLNARDTLRALLD 126 (367)
T ss_dssp HHHHHHHHHHHHHHH---------HHTTTCC----EEEEEECGGGG----------------SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---------HHHcCCc----eEEEEEecccc----------------cCceEEEhHHHHHHHHHH
Confidence 23333455566554 6888987 44444443332 233344565 89999999
Q ss_pred CCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCH--HHHHHHHHhhc
Q 007275 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRV 320 (609)
Q Consensus 250 ~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~--~e~~~l~~~~~ 320 (609)
.|+|||+++++...++++.++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++. +|+++++..
T Consensus 127 ~g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~-- 204 (367)
T 2j5v_A 127 NNVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGD-- 204 (367)
T ss_dssp TTCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC-----------------------------------
T ss_pred CCCEEEECCCCceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhc--
Confidence 9999999998888888899999999999999999999999999999983 36899999998 777766432
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
.++++++| | |
T Consensus 205 ------------------------------------------------~~s~~gtG-g---------------------M 214 (367)
T 2j5v_A 205 ------------------------------------------------SVSGLGTG-G---------------------M 214 (367)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ------------------------------------------------cCCCcCcC-c---------------------c
Confidence 12345566 5 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
.+||+||..|+++|++ ++|+|++.++. |.++|++++.||+|.++
T Consensus 215 ~~Kl~Aa~~a~~~Gv~-v~I~~g~~~~~-L~~~l~g~~~GT~i~~~ 258 (367)
T 2j5v_A 215 STKLQAADVACRAGID-TIIAAGSKPGV-IGDVMEGISVGTLFHAQ 258 (367)
T ss_dssp HHHHHHHHHHHHTTCE-EEEEETTSTTH-HHHHHHTCCCSEEECCC
T ss_pred HHHHHHHHHHHHcCCC-EEEEcCCCchH-HHHHhcCCCCcEEEEcC
Confidence 9999999999999997 99999999996 58999999999999874
|
| >2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=272.17 Aligned_cols=231 Identities=14% Similarity=0.119 Sum_probs=174.0
Q ss_pred CeEEEEeCCcccC-----CC-ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-H
Q 007275 100 GTFVVIISGEIVS-----SP-YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-M 172 (609)
Q Consensus 100 k~iVIKlGGsvl~-----~~-~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~ 172 (609)
|++|||+||++++ ++ .+++++++|+.|++. +++|||||||++ ..+..+++++ .++++. +++ .
T Consensus 2 k~iViKlGGs~l~~~~~~~~~~~~~~~~~i~~l~~~-~~vVlVhgGg~~--~~~~~~g~~~-----~~~~~~---~~l~~ 70 (251)
T 2ako_A 2 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEK-YEVILVTSAAIS--AGHTKLDIDR-----KNLINK---QVLAA 70 (251)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHHH-SEEEEEECCHHH--HHHHHCCCCS-----SSHHHH---HHHHH
T ss_pred CEEEEEeCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEECCHHH--HHHHHhCCcc-----CCchHH---HHHHH
Confidence 6899999999998 32 278899999999888 999999999855 5778888875 233332 332 3
Q ss_pred HHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCH-HHHHHHHhCC
Q 007275 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGG 251 (609)
Q Consensus 173 ~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~-~~I~~LL~~G 251 (609)
..+..++..+.+. |.++|++ +.++...+++ +.++++.++. +.|+.||+.|
T Consensus 71 ~~q~~l~~~~~~~---------l~~~G~~----~~~i~~~~~~----------------~~~~~~~~~~~~~i~~ll~~g 121 (251)
T 2ako_A 71 IGQPFLISVYNEL---------LAKFNKL----GGQILLTGKD----------------FDSRKATKHAKNAIDMMINLG 121 (251)
T ss_dssp HHHHHHHHHHHHH---------HGGGTCC----EEEEEECTGG----------------GGCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH---------HHHcCCc----EEEEEeccch----------------hcCcceEehHHHHHHHHHHCC
Confidence 3344555555554 6788987 4455444433 2344445665 8999999999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHH--HHHHHHHhhchh
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ--EADSLIRQRVKQ 322 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~--e~~~l~~~~~~~ 322 (609)
+|||+++++....++..++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+ |+.+++...
T Consensus 122 ~ipVi~~~d~v~~~~~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~--- 198 (251)
T 2ako_A 122 ILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKT--- 198 (251)
T ss_dssp CEEEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC---------
T ss_pred CEEEEeCCCceeecceeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhccc---
Confidence 99999976554445568999999999999999999999999999983 468999999987 776664321
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHH
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~ 402 (609)
++++++| | |.+
T Consensus 199 -----------------------------------------------~~~~~~g-g---------------------m~~ 209 (251)
T 2ako_A 199 -----------------------------------------------GSEHGTG-G---------------------IVT 209 (251)
T ss_dssp --------------------------------------------------CBSC-H---------------------HHH
T ss_pred -----------------------------------------------CCCCccC-c---------------------hHH
Confidence 1223444 4 999
Q ss_pred HHHHHHHHHHcCCCeEEEeecccccchhhh--hhhcCCCccccc
Q 007275 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLE--LFKRDGMGTMVA 444 (609)
Q Consensus 403 kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~e--l~~~~g~GT~i~ 444 (609)
|++||..|+++|++ +||+|++.+++| .+ +|++++.||+|.
T Consensus 210 k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 210 KLKAAKFLLEHNKK-MFLASGFDLSVA-KTFLLEDKQIGGTLFE 251 (251)
T ss_dssp HHHHHHHHHHTTCE-EEEEESSSCHHH-HHHHHSCCCCSSEEEC
T ss_pred HHHHHHHHHHCCCe-EEEEeCCChhhh-hhhHHhcCCCCceEeC
Confidence 99999999999997 999999999975 77 899999999983
|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=273.05 Aligned_cols=228 Identities=17% Similarity=0.112 Sum_probs=177.6
Q ss_pred HHHhhhhHHhhcCCeEEEEeCCcccCCC---ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCC
Q 007275 87 FREAWPYLWAHRGGTFVVIISGEIVSSP---YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRIT 163 (609)
Q Consensus 87 ~r~a~pyi~~~~~k~iVIKlGGsvl~~~---~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt 163 (609)
=.+++|||+.|++ ++|||+||+ ++++ .+.+++++|+.|+ .|+++|||||||++++..++ ++.+ .|.
T Consensus 28 ~~~~~pyi~~~~~-~iVIKiGGs-l~~~~~~~l~~l~~~I~~l~-~G~~vVlV~GGg~~~~~~~~-~~~~----~gl--- 96 (276)
T 2ogx_A 28 PVAGKRPIRLLPW-LQVVKIGGR-VMDRGADAILPLVEELRKLL-PEHRLLILTGAGVRARHVFS-VGLD----LGL--- 96 (276)
T ss_dssp ---CCCCCCSSTT-EEEEEECHH-HHTTTHHHHHHHHHHHHHHT-TTCEEEEEECCTHHHHHHHH-HHHH----TTC---
T ss_pred hcccCchhhhcCC-eEEEEEChh-hcCCCHHHHHHHHHHHHHHh-CCCeEEEEECcHHHHHHHHh-ccCc----CCC---
Confidence 3568999999999 999999999 8773 3789999999998 79999999999999987776 4433 222
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHH
Q 007275 164 DSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTR 243 (609)
Q Consensus 164 ~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~ 243 (609)
+...++.+....+.+|..+++.| +..+|++ ++.+ ..+.+.
T Consensus 97 ~~~~l~~v~~~~~~~n~~l~~~l--------l~~~g~~----~v~~----------------------------~~~~~~ 136 (276)
T 2ogx_A 97 PVGSLAPLAASEAGQNGHILAAM--------LASEGVS----YVEH----------------------------PTVADQ 136 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH--------HGGGTCC----BCCH----------------------------HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH--------HHhcCCC----cccc----------------------------cChHHH
Confidence 45677777555678888888764 4466654 1110 125678
Q ss_pred HHHHHhCCCeEEEcCCccCC---C-Cc-EEEecHHHHHHHHHHHcCCCEEEEEecccccC---C------CCccccccCH
Q 007275 244 MRERLDGGCLVILSNLGYSS---S-GE-VLNCNTYEVATACALAIEADKLICIIDGPILD---E------SGHLIRFLTL 309 (609)
Q Consensus 244 I~~LL~~G~IPVi~~~~~~~---~-ge-~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~---~------~~~lI~~it~ 309 (609)
|+.||++|.|||++++.... . |+ +.|+|+|.+|+++|.+|+||+|+|+|||||++ | ++++|++++.
T Consensus 137 i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~ 216 (276)
T 2ogx_A 137 LAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSA 216 (276)
T ss_dssp HHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEH
T ss_pred HHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCH
Confidence 99999999999999964322 2 33 48999999999999999999999999999983 3 3899999998
Q ss_pred HHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccccccc
Q 007275 310 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 389 (609)
Q Consensus 310 ~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g 389 (609)
+|+.++. ++| |
T Consensus 217 ~e~~~~~---------------------------------------------------------g~g-g----------- 227 (276)
T 2ogx_A 217 TDLAKSE---------------------------------------------------------GPL-P----------- 227 (276)
T ss_dssp HHHHTSC---------------------------------------------------------SCC-S-----------
T ss_pred HHHHHHh---------------------------------------------------------CcC-C-----------
Confidence 8765442 123 5
Q ss_pred ccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 390 ~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+|+.++..+.+.|+ +++|+|++.++.| .+++++++.||+|.++
T Consensus 228 ----------M~~K~~~~~~~~~~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 228 ----------VDRALLDVMATARHIE-RVQVVNGLVPGRL-TAALRGEHVGTLIRTG 272 (276)
T ss_dssp ----------SCHHHHHHHHTCSSCC-EEEEEETTSTTHH-HHHHTTCCCSEEEECS
T ss_pred ----------hHHHHHHHHHHhcCCC-eEEEEECCCccHH-HHHHcCCCCceEEccC
Confidence 9999988877777776 6999999999975 5677888999999865
|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=253.35 Aligned_cols=210 Identities=16% Similarity=0.140 Sum_probs=167.7
Q ss_pred CeEEEEeCCcccC--CC-ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH---HHHcCCcccccCCccCCCHHHHHHHHH
Q 007275 100 GTFVVIISGEIVS--SP-YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL---LSERGHEAKYLGRYRITDSESLAAAME 173 (609)
Q Consensus 100 k~iVIKlGGsvl~--~~-~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~---l~~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (609)
+++|||+||++++ ++ .+++++++|+.|++.|+++|||||||++++.. ++++++++ ..++...+
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~~~~~~~~~g~~~-----------~~~~~~~~ 69 (226)
T 2j4j_A 1 MNIILKISGKFFDEDNVDNLIVLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIGE-----------AYLDLLGI 69 (226)
T ss_dssp CEEEEEECTHHHHTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTTCCH-----------HHHHHHHH
T ss_pred CeEEEEeccccccCCCHHHHHHHHHHHHHHHhCCCeEEEEECcchHhchhHHHHHHhCCCc-----------ccHHHHHH
Confidence 4799999999998 43 37899999999998999999999999999886 67777642 45666655
Q ss_pred HHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCe
Q 007275 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (609)
Q Consensus 174 ~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~I 253 (609)
....++..+++. .|+++|++ + + .++.+.|+++|+.|.|
T Consensus 70 ~~~~~~~~l~~~--------~l~~~g~~----~------~------------------------~~~~~~i~~ll~~g~i 107 (226)
T 2j4j_A 70 WASRLNAYLVMF--------SLQDLAYM----H------V------------------------PQSLEEFIQDWSHGKV 107 (226)
T ss_dssp HHHHHHHHHHHH--------HHTTSBCS----C------C------------------------CSSHHHHHHHHTTSSB
T ss_pred HHHHHHHHHHHH--------HHHHhCCC----C------C------------------------cCCHHHHHHHHHCCCE
Confidence 666888888652 25666764 1 0 2456789999999999
Q ss_pred EEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhhH
Q 007275 254 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIA 326 (609)
Q Consensus 254 PVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~~ 326 (609)
||+++ + ..|+|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.+++...
T Consensus 108 pVi~g-g------~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~------- 173 (226)
T 2j4j_A 108 VVTGG-F------QPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGS------- 173 (226)
T ss_dssp EEECC-C------STTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC---------
T ss_pred EEEcC-C------CCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcC-------
Confidence 99999 2 23899999999999999999999999999983 358999999999988775320
Q ss_pred hhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC--HHHH
Q 007275 327 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY--LSEL 404 (609)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m--~~kl 404 (609)
++.+| | | .+|+
T Consensus 174 ---------------------------------------------~~~~g-g---------------------m~~~~k~ 186 (226)
T 2j4j_A 174 ---------------------------------------------QSVQA-G---------------------TYELLDP 186 (226)
T ss_dssp ---------------------------------------------------------------------------CCSCH
T ss_pred ---------------------------------------------CCCcC-C---------------------ccccchH
Confidence 12234 5 6 8889
Q ss_pred HHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 405 ~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.+|..|++.|++ +||+|++.++.+ .++|++++.||+|.+
T Consensus 187 ~a~~~a~~~gi~-v~I~~~~~~~~l-~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 187 LAIKIVERSKIR-VIVMNYRKLNRI-IDILKGEEVSSIIEP 225 (226)
T ss_dssp HHHHHHHHTTCE-EEEEEGGGGGGH-HHHHTTCSSCEEEEC
T ss_pred HHHHHHHHCCCe-EEEEeCCChhHH-HHHHcCCCCceEEee
Confidence 999999999997 999999999975 889999999999964
|
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=253.11 Aligned_cols=219 Identities=19% Similarity=0.108 Sum_probs=168.4
Q ss_pred CCeEEEEeCCcccCCC-------C-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHH
Q 007275 99 GGTFVVIISGEIVSSP-------Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~-------~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
.|++|||+||++|+++ + +++++++|+.+++.|+++|||||||+.+...... ..| +.+....+.
T Consensus 7 ~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~-------~~G--~~~~~~~~~ 77 (240)
T 4a7w_A 7 NKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAA-------QGG--IIRRTSGDY 77 (240)
T ss_dssp CCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC------------------CCCHHHHHH
T ss_pred CCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHH-------hcC--CCCCCCHHH
Confidence 5899999999999842 2 6789999999999999999999999887543211 123 123333444
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~ 250 (609)
..++++.+|..+++. .|.++|++ ++++++.|..... +.++.+.+..+|+.
T Consensus 78 ~~~la~~~n~~l~~~--------~l~~~G~~----av~lt~~d~~~~~------------------~~~~~~~i~~lL~~ 127 (240)
T 4a7w_A 78 MGMLATVINAVAMQE--------ALEHIGLD----TRVQSAIEIKEIC------------------ESYIYRKAIRHLEK 127 (240)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCTTTS------------------EECCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH--------HHHHCCCC----EEEecHHHcCccc------------------CcCcHHHHHHHHHC
Confidence 434567788887744 47999998 7888887754211 23578889999999
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~ 323 (609)
|.|||+++. .|. .++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.+. +
T Consensus 128 g~ipVi~~~----~g~-~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g---- 195 (240)
T 4a7w_A 128 GRVVIFGAG----TGN-PFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIG---D---- 195 (240)
T ss_dssp TCEEEEEST----TSC-TTSCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHS---S----
T ss_pred CCEEEEeCC----CCC-CCCChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhc---C----
Confidence 999999983 222 3699999999999999999999999999983 45789999998875431 1
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
.+ + | +
T Consensus 196 ---------------------------------------------------~~-~---------------------m--~ 200 (240)
T 4a7w_A 196 ---------------------------------------------------IE-V---------------------M--D 200 (240)
T ss_dssp ---------------------------------------------------CC-S---------------------S--C
T ss_pred ---------------------------------------------------cc-c---------------------c--H
Confidence 12 3 6 4
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
++||..|+++|++ +||+|++.+++|+.++++++++||+|+
T Consensus 201 ~~a~~~a~~~gv~-v~I~~g~~~~~l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 201 DTAISLAKDNKLP-IVVCNMFKKGNLLQVIKHQQGVFSMVK 240 (240)
T ss_dssp HHHHHHHHHTTCC-EEEEESSSTTHHHHHHHHSCSSCEEEC
T ss_pred HHHHHHHHHCCCe-EEEECCCCccHHHHHHCCCCCCceeeC
Confidence 7899999999996 999999999999999999999999984
|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=260.41 Aligned_cols=230 Identities=16% Similarity=0.164 Sum_probs=173.6
Q ss_pred HHHHHhhhhHHh--hcCCeEEEEeCCcccCCC---ChHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCC
Q 007275 85 KWFREAWPYLWA--HRGGTFVVIISGEIVSSP---YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (609)
Q Consensus 85 ~~~r~a~pyi~~--~~~k~iVIKlGGsvl~~~---~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g 159 (609)
+.|.++.||++. +..+++|||+||++++++ .+.+++++|+.|+.. +++|||||||++.+. +.+++.+. |
T Consensus 20 ~~~~~~~~~~~~~~~m~~~iVIKlGGs~l~~~~~~~~~~la~~I~~l~~~-~~vVlVhGGg~~~~~-~~~~~~~~----g 93 (270)
T 2ogx_B 20 PQLQAAAAAAADFRILPDATVIKIGGQSVIDRGRAAVYPLVDEIVAARKN-HKLLIGTGAGTRARH-LYSIAAGL----G 93 (270)
T ss_dssp HHHHHHHHTSCCCCSSTTEEEEEECTTTTGGGCHHHHHHHHHHHHHHTTT-CEEEEEECCCHHHHH-HHHHHHHT----T
T ss_pred hhhhhhhcccchhhhccCeEEEEechHHhCCCCHHHHHHHHHHHHHHhcC-CcEEEEECChHHHHH-HHHHHHhc----C
Confidence 358899999977 545699999999999974 378999999999876 999999999996543 44444332 1
Q ss_pred ccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEee
Q 007275 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (609)
Q Consensus 160 ~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~ 238 (609)
. +...+... +.++|+.+..+++. |.++|++ . ++.
T Consensus 94 --~-~~~~~~~~~~~a~G~~~l~~~~~---------l~~~G~~--------------~-------------------vt~ 128 (270)
T 2ogx_B 94 --L-PAGVLAQLGSSVADQNAAMLGQL---------LAKHGIP--------------V-------------------VGG 128 (270)
T ss_dssp --C-CHHHHHHHHHHHHHHHHHHHHHH---------HGGGTCC--------------B-------------------CCS
T ss_pred --C-ChHHHHHHHHHHHHHHHHHHHHH---------HHhcCCc--------------e-------------------ecH
Confidence 1 34445444 67788877777654 4567754 0 112
Q ss_pred eCHHHHHHHHhCCCeEEEcCCc-cC------CCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccc
Q 007275 239 VDVTRMRERLDGGCLVILSNLG-YS------SSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLI 304 (609)
Q Consensus 239 v~~~~I~~LL~~G~IPVi~~~~-~~------~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI 304 (609)
.|.+.|+.+|+.|.|||+++++ ++ ..|+..++|+|.+|+++|.+|+||+|+|+|||||++ |++++|
T Consensus 129 ~d~~~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i 208 (270)
T 2ogx_B 129 AGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFI 208 (270)
T ss_dssp STTCHHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEE
T ss_pred hhHHHHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEc
Confidence 3344699999999999999873 22 135567799999999999999999999999999983 348999
Q ss_pred cccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccc
Q 007275 305 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQ 384 (609)
Q Consensus 305 ~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~ 384 (609)
++++.+|++++...+ +.++ | |
T Consensus 209 ~~i~~~e~~~~~~~g---------------------------------------------------~~~~-g-g------ 229 (270)
T 2ogx_B 209 PRISVDEMKAKGLHD---------------------------------------------------SILE-F-P------ 229 (270)
T ss_dssp SEEEHHHHHHTTCCC---------------------------------------------------TTSC-H-H------
T ss_pred ceeCHHHHHHHhcCC---------------------------------------------------Cccc-H-H------
Confidence 999998877664211 0111 1 3
Q ss_pred cccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 385 GFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 385 ~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|.+|+++|. .++ ++||+|++.+++| .++|++++.||+|.+
T Consensus 230 ---------------m~~kl~aa~----~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 230 ---------------VLDLLQSAQ----HVR-EVQVVNGLVPGNL-TRALAGEHVGTIITA 269 (270)
T ss_dssp ---------------HHHHHHHCS----SCC-EEEEEETTSTTHH-HHHHTTCCCSEEEEC
T ss_pred ---------------HHHHHHHhh----cCC-cEEEEeCCCchHH-HHHHcCCCCCeEecC
Confidence 999999885 345 6999999999965 889999999999975
|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=252.39 Aligned_cols=210 Identities=14% Similarity=0.068 Sum_probs=160.9
Q ss_pred CeEEEEeCCcccCCC-----ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH---HHHcCCcccccCCccCCCHHHHHHH
Q 007275 100 GTFVVIISGEIVSSP-----YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL---LSERGHEAKYLGRYRITDSESLAAA 171 (609)
Q Consensus 100 k~iVIKlGGsvl~~~-----~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~---l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (609)
+++|||+||++|+++ .+++++++|+.|++ |+++|||||||++++.+ ++++++ +...++..
T Consensus 20 k~iViKlGGs~l~~~~~~~~~i~~~~~~i~~l~~-g~~vViV~GgG~~~~~~~~~~~~~gl-----------~~~~~~~~ 87 (244)
T 2brx_A 20 MRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNS-----------SETFKDFI 87 (244)
T ss_dssp CEEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTTC-----------CHHHHHHH
T ss_pred cEEEEEechhhcCCCCCCHHHHHHHHHHHHHHhC-CCeEEEEECccHHHhchHHHHHHcCC-----------CcccHHHH
Confidence 689999999999853 27899999999999 99999999999999883 556555 34566666
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCC
Q 007275 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (609)
Q Consensus 172 ~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G 251 (609)
.+....+|..+++. .|.++|++ + ..++.+.+.++|+.|
T Consensus 88 ~~~~~~~~~~l~~~--------~l~~~g~~----~------------------------------~~~~~~~i~~lL~~g 125 (244)
T 2brx_A 88 GIQITRANAMLLIA--------ALREKAYP----V------------------------------VVEDFWEAWKAVQLK 125 (244)
T ss_dssp HHHHHHHHHHHHHH--------HHGGGBCS----S------------------------------CBCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHH--------HHHHcCCC----C------------------------------CcCCHHHHHHHHhCC
Confidence 55566777777652 25667754 1 124667889999999
Q ss_pred CeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhh
Q 007275 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSE 324 (609)
Q Consensus 252 ~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~ 324 (609)
.|||+++ |.. +.|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+++++...
T Consensus 126 ~IpVi~g------g~~-~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~----- 193 (244)
T 2brx_A 126 KIPVMGG------THP-GHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKG----- 193 (244)
T ss_dssp CBCEECC------CST-TCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC------
T ss_pred CEEEEcC------CCC-CCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhcc-----
Confidence 9999999 233 349999999999999999999999999983 368999999999988876431
Q ss_pred hHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHH
Q 007275 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (609)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl 404 (609)
++.+| | |.+|.
T Consensus 194 -----------------------------------------------g~~~g-~---------------------m~~~~ 204 (244)
T 2brx_A 194 -----------------------------------------------IEKAG-S---------------------SSVID 204 (244)
T ss_dssp ----------------------------------------------------------------------------CCSC
T ss_pred -----------------------------------------------CCCCC-C---------------------CcchH
Confidence 01123 4 55556
Q ss_pred HHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 405 ~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.+|..+++.++.+++|+||+.++.| .++|++++.||+|.+
T Consensus 205 ~~A~~~~~~~~~~v~I~ng~~~~~l-~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 205 PLAAKIIARSGIKTIVIGKEDAKDL-FRVIKGDHNGTTIEP 244 (244)
T ss_dssp HHHHHHHHHHTCCEEEECHHHHTCH-HHHHTTCSSSEEECC
T ss_pred HHHHHHHHHCCCeEEEEeCCChhHH-HHHHcCCCCceEecC
Confidence 6676666655556999999999975 889999999999864
|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=244.27 Aligned_cols=207 Identities=17% Similarity=0.106 Sum_probs=159.0
Q ss_pred CeEEEEeCCcccCC--CChHHHHHHHHHHHhCCCeEEEEECChHHHhH---HHHHcCCcccccCCccCCCHHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSS--PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAAAMEA 174 (609)
Q Consensus 100 k~iVIKlGGsvl~~--~~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~---~l~~~g~~~~~~~g~rvt~~~~l~~~~~~ 174 (609)
+++|||+||+++++ +.+++++++|+.|++ |+++|||||||++++. .++++++ +...++.+.+.
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~i~~l~~-g~~vvlV~ggG~~~~~~~~~~~~~g~-----------~~~~l~~~~~~ 68 (219)
T 2ij9_A 1 MKVVLSLGGSVLSNESEKIREFAKTIESVAQ-QNQVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIA 68 (219)
T ss_dssp CEEEEEECSSTTTTCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHH
T ss_pred CeEEEEeChhhhCChHHHHHHHHHHHHHHcC-CCEEEEEECcchHhcchHHHHHHcCC-----------CccchHHHHHH
Confidence 47999999999998 348999999999998 9999999999999999 5677776 34567777556
Q ss_pred HHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeE
Q 007275 175 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 254 (609)
Q Consensus 175 ~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IP 254 (609)
.+.+|..+++.+ |.. ++. + +.++.+.|+.+|+.|.||
T Consensus 69 ~~~~~~~l~~~~--------~~~-~~~----~------------------------------~~~~~~~i~~ll~~g~ip 105 (219)
T 2ij9_A 69 ATRLNAMLLISA--------IPS-AAK----K------------------------------VPVDFMEAEELSKLYRVV 105 (219)
T ss_dssp HHHHHHHHHHHH--------CTT-BCS----S------------------------------CCSSHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHH--------HHH-hcC----C------------------------------CcCCHHHHHHHHHCCCEE
Confidence 778888877653 111 110 0 135778899999999999
Q ss_pred EEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC---C----CCccccccCHHHHHHHHHhhchhhhhHh
Q 007275 255 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQRVKQSEIAA 327 (609)
Q Consensus 255 Vi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~---~----~~~lI~~it~~e~~~l~~~~~~~~~~~~ 327 (609)
|++| |..++ |+|.+|+++|.+|+||+|+|+|||||++ | ++++|++++.+|+++++...
T Consensus 106 Vi~~------g~~~~-~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~-------- 170 (219)
T 2ij9_A 106 VMGG------TFPGH-TTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS-------- 170 (219)
T ss_dssp EECC------CSSSS-CTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC---------
T ss_pred EEeC------CCCCC-CchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcC--------
Confidence 9999 33344 9999999999999999999999999983 3 68999999999887774220
Q ss_pred hhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHH
Q 007275 328 NYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAA 407 (609)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa 407 (609)
++.+| | |.+|..+|
T Consensus 171 --------------------------------------------g~~~g-~---------------------~~~~~~~a 184 (219)
T 2ij9_A 171 --------------------------------------------SAKAG-T---------------------NVVIDLLA 184 (219)
T ss_dssp ------------------------------------------------C-C---------------------CCCSCHHH
T ss_pred --------------------------------------------CCCCC-C---------------------ccchHHHH
Confidence 01123 4 44445556
Q ss_pred HHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 408 AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 408 ~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
..+++.++.++||+|+ .++.| .++|++++.||+|.
T Consensus 185 ~~~~~~~~~~v~I~~g-~~~~l-~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 185 AKIIERSKIKTYVILG-TPENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHHHHHTCCEEEEEC-CHHHH-HHHHTTCCCSEEEC
T ss_pred HHHHHHCCCeEEEEEC-CHhHH-HHHHcCCCCCeEeC
Confidence 6655554456999999 99865 78999999999984
|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-28 Score=245.36 Aligned_cols=219 Identities=15% Similarity=0.124 Sum_probs=167.0
Q ss_pred CCeEEEEeCCcccCCC--------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~--------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
.+++|||+||++|+++ .+.+++++|+.|++.|+++|||||||+++... ++++++++. ..+
T Consensus 7 ~k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~~~~lg~~~~-----------~~~ 75 (252)
T 1z9d_A 7 YQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRV-----------QAD 75 (252)
T ss_dssp CSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCCHH-----------HHH
T ss_pred CCEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChHhccchHHHcCCCCC-----------chH
Confidence 4799999999999853 26889999999999999999999999876544 677887642 122
Q ss_pred HHHHHHHHHHHH-HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 170 AAMEAAGGIRMM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 170 ~~~~~~g~i~~~-l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
...++.+.++.. +.+ .|.++|++ +..+++.+...+. + ..++.+. ++||
T Consensus 76 ~~~~~~~~~~~~ll~~---------al~~~G~~----~~~~~~~~~~~~~----------~-------~~~~~~~-~~lL 124 (252)
T 1z9d_A 76 YTGMLGTVMNALVMAD---------SLQHYGVD----TRVQTAIPMQNVA----------E-------PYIRGRA-LRHL 124 (252)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHTTTCC----EEEEESSCBTTTB----------E-------ECCHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHHcCCC----eEEEecccccccc----------C-------cchHHHH-HHHH
Confidence 334455566666 444 36788887 6666665432111 0 0134444 8999
Q ss_pred hCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEe-cccccC-------CCCccccccCHHHHHHHHHhhc
Q 007275 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLT-Dvdgv~-------~~~~lI~~it~~e~~~l~~~~~ 320 (609)
+.|.|||++|. .| ..|+|+|.+|+++|.+|+||+|+|+| ||||++ |++++|++++.+|+.+. +
T Consensus 125 ~~g~IpVi~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---~- 195 (252)
T 1z9d_A 125 EKNRIVVFGAG----IG-SPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKR---G- 195 (252)
T ss_dssp HTTCEEEEEST----TS-CTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTT---T-
T ss_pred hCCCEEEEeCC----cC-CCCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhc---c-
Confidence 99999999982 22 35899999999999999999999999 999983 35899999998876431 1
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
.| + |
T Consensus 196 ------------------------------------------------------~~-~---------------------m 199 (252)
T 1z9d_A 196 ------------------------------------------------------LK-I---------------------M 199 (252)
T ss_dssp ------------------------------------------------------CC-C---------------------S
T ss_pred ------------------------------------------------------cc-c---------------------c
Confidence 12 3 7
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~ 448 (609)
|+.||..|++.|++ ++|+|++.++.| .++|++++.||+|.++.|
T Consensus 200 --k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~l~g~~~GT~i~~~~~ 243 (252)
T 1z9d_A 200 --DATASTLSMDNDID-LVVFNMNEAGNI-QRVVFGEHIGTTVSNKVC 243 (252)
T ss_dssp --CHHHHHHHHHTTCE-EEEEETTSTTHH-HHHHTTCCCSEEEECC--
T ss_pred --CHHHHHHHHHcCCe-EEEEeCCCchHH-HHHHcCCCCceEEecCCC
Confidence 78899999999997 999999999964 889999999999998776
|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-28 Score=244.75 Aligned_cols=214 Identities=12% Similarity=0.071 Sum_probs=162.8
Q ss_pred CCeEEEEeCCcccCCC--------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~--------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
.|++|||+||++|+++ .+..++++|+.|+ .|+++|||||||+++... ++++++++. ..+
T Consensus 24 ~k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~-~g~~vVlVhGgG~~~~~~~~~~~g~~~~-----------~~~ 91 (256)
T 2va1_A 24 KQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKIS-KKYIVSIVLGGGNIWRGSIAKELDMDRN-----------LAD 91 (256)
T ss_dssp CSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHT-TTSEEEEEECCTTTCCHHHHHHTTCCHH-----------HHH
T ss_pred cCEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEECCcHHhccchHHHcCCCCC-----------chh
Confidence 4789999999999864 1688999999998 899999999999997765 778887642 122
Q ss_pred HHHHHHHHHHHHH-HHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 170 AAMEAAGGIRMMI-EAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 170 ~~~~~~g~i~~~l-~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
...++...+|..+ .+ .|.++|++ +++++..+...+ +.. .++.+. ..||
T Consensus 92 ~~~~l~~~~n~~l~~~---------~l~~~Gi~----a~~~~~~t~~~~-----------~~~------~~~~~~-~~lL 140 (256)
T 2va1_A 92 NMGMMATIINGLALEN---------ALNHLNVN----TIVLSAIKCDKL-----------VHE------SSANNI-KKAI 140 (256)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHTTTCC----EEEEESSCCTTT-----------CEE------CCHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHHcCCC----eEEEeeeecccc-----------cch------hhHHHH-HHHH
Confidence 3344555677676 44 36788887 556654432111 000 234555 7899
Q ss_pred hCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEec-ccccC-------CCCccccccCHHHHHHHHHhhc
Q 007275 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTD-vdgv~-------~~~~lI~~it~~e~~~l~~~~~ 320 (609)
+.|+|||++|. +| ..++|+|.+|+++|.+|+||+|+|+|| |||++ |++++|++++.+|++++ +.
T Consensus 141 ~~g~IpVi~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~---~~ 212 (256)
T 2va1_A 141 EKEQVMIFVAG----TG-FPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQ---NL 212 (256)
T ss_dssp HTTCEEEEEST----TS-SSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHH---TC
T ss_pred hCCcEEEEECC----CC-CCCCChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHh---cc
Confidence 99999999982 22 346899999999999999999999999 99984 35899999999887665 11
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
| | |
T Consensus 213 -------------------------------------------------------~-~---------------------m 215 (256)
T 2va1_A 213 -------------------------------------------------------K-V---------------------M 215 (256)
T ss_dssp -------------------------------------------------------C-S---------------------S
T ss_pred -------------------------------------------------------C-C---------------------c
Confidence 1 4 8
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
|++||..|++.|++ ++|+|+..++.+ .++|++++.||+|.
T Consensus 216 --k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 216 --DATALALCQENNIN-LLVFNIDKPNAI-VDVLEKKNKYTIVS 255 (256)
T ss_dssp --CHHHHHHHHHTTCE-EEEEESSSTTHH-HHHHTTCSCEEEEE
T ss_pred --cHHHHHHHHHCCCe-EEEEeCCCchHH-HHHHcCCCCeEEEe
Confidence 89999999999997 999999999965 68999999999985
|
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=241.29 Aligned_cols=217 Identities=18% Similarity=0.146 Sum_probs=165.8
Q ss_pred cCCeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHH-HhHHHHHcCCcccccCCccCCCHHHH
Q 007275 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~-i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (609)
+.|+||||+||++|++++ +++++++|+.+++.|+++|||||||+. .+..+.++|++. ...
T Consensus 8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~~~g~~~-----------~~~ 76 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDR-----------VTG 76 (243)
T ss_dssp SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCH-----------HHH
T ss_pred cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCCCC-----------CCH
Confidence 358999999999998742 688999999999999999999998764 344444444432 222
Q ss_pred HHHHHHHHHHHHH-HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHH
Q 007275 169 AAAMEAAGGIRMM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (609)
Q Consensus 169 ~~~~~~~g~i~~~-l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~L 247 (609)
+...++...+|.. +.+ .|.++|++ ++.+++.+...+ .+.++.+.+..+
T Consensus 77 d~~g~l~t~~N~~~l~~---------al~~~G~~----a~~~~~~~~~~v------------------~~~~~~~~~~~l 125 (243)
T 3ek6_A 77 DHMGMLATVINALAMQD---------ALEKLGAK----VRVMSAIKINDV------------------CEDFIRRRAIRH 125 (243)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHHHTTCC----EEEEESSCBTTT------------------BEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHcCCC----eEEechhhcCcc------------------cCcCCHHHHHHH
Confidence 3333345577877 444 36889987 777776653211 123567789999
Q ss_pred HhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhc
Q 007275 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 248 L~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~ 320 (609)
|+.|.|||+++. .| ..++|+|++|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.+ .+.
T Consensus 126 L~~g~IpVv~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~---~g~ 197 (243)
T 3ek6_A 126 LEKGRIAIFAAG----TG-NPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIM---QGL 197 (243)
T ss_dssp HHTTCEEEEEST----TS-STTCCHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHH---HTC
T ss_pred HHCCcEEEEECC----CC-CCcCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHh---CCc
Confidence 999999999983 22 23599999999999999999999999999983 4678999999887643 111
Q ss_pred hhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCC
Q 007275 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (609)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m 400 (609)
+ + |
T Consensus 198 -------------------------------------------------------~-~---------------------~ 200 (243)
T 3ek6_A 198 -------------------------------------------------------E-V---------------------M 200 (243)
T ss_dssp -------------------------------------------------------C-S---------------------S
T ss_pred -------------------------------------------------------h-h---------------------H
Confidence 1 2 4
Q ss_pred HHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|+.||..|++.|++ +||+|++.++. |.++|++++.||+|.+
T Consensus 201 --~~~a~~~a~~~gv~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 201 --DTAAFALARDSDLP-LRIFGMSEPGV-LLRILHGAQIGTLVQG 241 (243)
T ss_dssp --CHHHHHHHHHTTCC-EEEECCCSTTH-HHHHHTTCCCSEEECC
T ss_pred --HHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHCCCCCceEEee
Confidence 58899999999997 99999999996 5699999999999976
|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=236.54 Aligned_cols=217 Identities=15% Similarity=0.107 Sum_probs=164.9
Q ss_pred CCeEEEEeCCcccCCC--------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~--------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
.+++|||+||++++++ .+.+++++|+.|++.|+++|||||||+++... +.+++++.. +.+
T Consensus 7 ~~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~~~~~~~~~~-----------~~~ 75 (239)
T 1ybd_A 7 YKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMDRA-----------TAD 75 (239)
T ss_dssp CSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTSCHH-----------HHH
T ss_pred CCEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhchhHHHcCCCCc-----------cHH
Confidence 4799999999999863 26889999999999999999999999987766 577777542 222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHh
Q 007275 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (609)
Q Consensus 170 ~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~ 249 (609)
...+....+|..+... .|.++|++ +..+++.+...+.. + .++.+.+ ++|+
T Consensus 76 ~~~~~~~~~~~~l~~~--------~l~~~G~~----~~~~~~~~~~~~~~---------~--------~~~~~~~-~ll~ 125 (239)
T 1ybd_A 76 YMGMMATVMNALALKD--------AFETLGIK----ARVQSALSMQQIAE---------T--------YARPKAI-QYLE 125 (239)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCBSSSCE---------E--------CCHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHHcCCC----eEEEeeeccccccc---------c--------hhHHHHH-HHHh
Confidence 3333455666664332 36888987 66666654321110 1 1345667 8999
Q ss_pred CCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchh
Q 007275 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (609)
Q Consensus 250 ~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~ 322 (609)
.|.|||+++. .| ..++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 126 ~g~ipVv~g~----~g-~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~-- 195 (239)
T 1ybd_A 126 EGKVVIFAAG----TG-NPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NL-- 195 (239)
T ss_dssp TTCEEEEEST----TS-STTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TC--
T ss_pred CCcEEEEECC----cc-CCCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cc--
Confidence 9999999842 22 23699999999999999999999999999983 45789999999876543 11
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHH
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~ 402 (609)
+ + |
T Consensus 196 -----------------------------------------------------~-~---------------------m-- 198 (239)
T 1ybd_A 196 -----------------------------------------------------K-V---------------------M-- 198 (239)
T ss_dssp -----------------------------------------------------C-S---------------------S--
T ss_pred -----------------------------------------------------c-c---------------------c--
Confidence 1 3 6
Q ss_pred HHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 403 kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|+.||..|++.|++ ++|+|++.++.| .++|++++.||+|.+
T Consensus 199 ~~~a~~~a~~~gv~-v~I~~~~~~~~l-~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 199 DATAFALCRERKLN-IVVFGIAKEGSL-KRVITGEDEGTLVHC 239 (239)
T ss_dssp CHHHHHHHHHTTCC-EEEECTTSTTHH-HHHHHTCSCSEEEEC
T ss_pred CHHHHHHHHHcCCc-EEEEeCCChhHH-HHHHcCCCCCeEEcC
Confidence 57799999999998 999999999975 689999999999863
|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-27 Score=235.40 Aligned_cols=216 Identities=17% Similarity=0.115 Sum_probs=165.1
Q ss_pred CCeEEEEeCCcccCCC--------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~--------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
.+++|||+||++++++ .+++++++|+.|++.|+++|||||||+++... +.+++++.. ..+
T Consensus 8 ~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g~~~~-----------~~d 76 (247)
T 2a1f_A 8 YKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRV-----------VGD 76 (247)
T ss_dssp CSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCCHH-----------HHH
T ss_pred ccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcCCCCC-----------cHH
Confidence 4799999999999853 26889999999999999999999999886555 577776542 233
Q ss_pred HHHHHHHHHHHH-HHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 170 AAMEAAGGIRMM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 170 ~~~~~~g~i~~~-l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
.+.++.+.+|.. +.+ .|.++|++ +..+++.+...+. .. .++.+ ++++|
T Consensus 77 ~~~~~~~~~~~~ll~~---------~l~~~G~~----~~~~~~~~~~~~~-----------~~------~~~~~-~~~ll 125 (247)
T 2a1f_A 77 HMGMLATVMNGLAMRD---------SLFRADVN----AKLMSAFQLNGIC-----------DT------YNWSE-AIKML 125 (247)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHHTTCC----EEEEESSCCTTTS-----------EE------CCHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHHcCCC----eEEeccccccccc-----------ch------hhHHH-HHHHH
Confidence 444555567766 444 36888987 6677666532110 01 13444 47899
Q ss_pred hCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhch
Q 007275 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~ 321 (609)
+.|.|||+++. .| ..++|+|.+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 126 ~~g~ipVi~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~- 196 (247)
T 2a1f_A 126 REKRVVIFSAG----TG-NPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---EL- 196 (247)
T ss_dssp HTTCEEEEEST----TS-CSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT---TC-
T ss_pred hCCCEEEEeCC----cC-CCCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc---Cc-
Confidence 99999999982 22 34699999999999999999999999999984 35899999998877543 11
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
+ + |
T Consensus 197 ------------------------------------------------------~-~---------------------m- 199 (247)
T 2a1f_A 197 ------------------------------------------------------K-V---------------------M- 199 (247)
T ss_dssp ------------------------------------------------------C-S---------------------S-
T ss_pred ------------------------------------------------------c-c---------------------c-
Confidence 1 3 6
Q ss_pred HHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|+.||..|++.|++ ++|+|+..++. |.++++++..||+|..
T Consensus 200 -~~~aa~~a~~~gv~-v~I~~~~~~~~-l~~~l~g~~~GT~~~~ 240 (247)
T 2a1f_A 200 -DLSAFTLARDHGMP-IRVFNMGKPGA-LRQVVTGTEEGTTICE 240 (247)
T ss_dssp -CHHHHHHHHHHTCC-EEEEETTSTTH-HHHHHTCSCSSEEECC
T ss_pred -CHHHHHHHHHcCCc-EEEEeCCCchH-HHHHHcCCCCceEEee
Confidence 57799999999998 99999999996 5778889999999974
|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=238.59 Aligned_cols=216 Identities=15% Similarity=0.165 Sum_probs=158.5
Q ss_pred CCeEEEEeCCcccCCCC-------hHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
.|+||||+||++|++++ +.+++++|+.+++.|++||||||||..+... ...+++. ....+.
T Consensus 50 ~krIViKlGGs~L~~~~~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~-----------~~~~d~ 118 (281)
T 3nwy_A 50 YSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGME-----------RTRSDY 118 (281)
T ss_dssp CSEEEEEECGGGGGTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCC-----------HHHHHH
T ss_pred CcEEEEEEchhhccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCC-----------ccchhH
Confidence 47999999999998642 6789999999999999999999887654322 1122222 222333
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~ 250 (609)
..++...+|..+.+. .|.++|++ ++.++..+.+.+. ++ .++.+.+ .+|++
T Consensus 119 ~g~lat~~n~~~l~~--------~L~~~Gi~----a~~~~~~~~~~~~-~~----------------~~~~~~l-~lL~~ 168 (281)
T 3nwy_A 119 MGMLGTVMNSLALQD--------FLEKEGIV----TRVQTAITMGQVA-EP----------------YLPLRAV-RHLEK 168 (281)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCGGGS-EE----------------CCHHHHH-HHHHT
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----EEEEecccccccc-cc----------------cchHHHH-HHHHc
Confidence 333445666544433 47899987 5566655544332 11 1345566 79999
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~ 323 (609)
|.|||+++. +| ..++|+|.+|+++|.+|+||+|||+|||||++ |++++|++++..|+.+ .
T Consensus 169 g~IpVv~g~----~g-~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~---~----- 235 (281)
T 3nwy_A 169 GRVVIFGAG----MG-LPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLD---R----- 235 (281)
T ss_dssp TCEEEEEST----TS-STTCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHT---T-----
T ss_pred CCeEEEECC----CC-CCCCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHH---c-----
Confidence 999999983 22 23699999999999999999999999999983 3578999999876421 1
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
| + |..|
T Consensus 236 ----------------------------------------------------g-~---------------------~v~k 241 (281)
T 3nwy_A 236 ----------------------------------------------------G-L---------------------RVAD 241 (281)
T ss_dssp ----------------------------------------------------T-C---------------------CSSC
T ss_pred ----------------------------------------------------C-C---------------------CcHH
Confidence 1 2 4557
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+.||..|++.|++ ++|+|++.++. |.++|++++.||+|.
T Consensus 242 ~~Aa~~a~~~Gi~-v~I~~g~~p~~-l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 242 ATAFSLCMDNGMP-ILVFNLLTDGN-IARAVRGEKIGTLVT 280 (281)
T ss_dssp HHHHHHHHTTTCC-EEEEETTSTTH-HHHHHHTCCCSEEEC
T ss_pred HHHHHHHHHCCCe-EEEecCCCchH-HHHHHcCCCCceEEe
Confidence 8999999999997 99999999996 569999999999985
|
| >3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=244.15 Aligned_cols=192 Identities=20% Similarity=0.201 Sum_probs=133.4
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEEC-ChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhG-gG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~ 177 (609)
+++|||+||++++++. +++++++|+.+++.|+++||||| +|++++.++...+.... + .+...++.+......
T Consensus 2 ~~iViK~GGssl~~~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~~~~~~~~-----~-~~~~~~d~~~a~Ge~ 75 (421)
T 3ab4_A 2 ALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNP-----V-PPAREMDMLLTAGER 75 (421)
T ss_dssp CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHHHHHHCS-----S-CCHHHHHHHHHHHHH
T ss_pred CeEEEEEChhHhCCHHHHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhhhhcc-----C-CCHHHHHHHHHHHHH
Confidence 6899999999999844 89999999999999999999996 78898888876653221 2 246777777543334
Q ss_pred HHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEc
Q 007275 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (609)
Q Consensus 178 i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~ 257 (609)
++..+... .|+++|++ +..+++.+..++++++ ++ .+++..++.+.|+.+|+.|.|||++
T Consensus 76 ~~~~ll~~--------~L~~~G~~----a~~l~~~~~~~~t~~~--------~~-~~~v~~~~~~~i~~~l~~g~ipVv~ 134 (421)
T 3ab4_A 76 ISNALVAM--------AIESLGAE----AQSFTGSQAGVLTTER--------HG-NARIVDVTPGRVREALDEGKICIVA 134 (421)
T ss_dssp HHHHHHHH--------HHHHTTCC----EEECCCC--------------------------CCHHHHHHHHHTTCEEEC-
T ss_pred HHHHHHHH--------HHHHCCCC----eEEEehhhceEEeccC--------CC-CeeechhhHHHHHHHHhCCCEEEEe
Confidence 67654333 36889987 7888877766666554 22 4778889999999999999999999
Q ss_pred CC-ccCCC-CcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHh
Q 007275 258 NL-GYSSS-GEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 258 ~~-~~~~~-ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~ 318 (609)
|. +.+.+ |++.++ ++|.+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++...
T Consensus 135 g~~g~~~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~ 207 (421)
T 3ab4_A 135 GFQGVNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAV 207 (421)
T ss_dssp -----------------CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHT
T ss_pred CCcCcCCCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhc
Confidence 97 77778 888888 9999999999999999999999999983 36899999999999998644
|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-25 Score=226.29 Aligned_cols=219 Identities=17% Similarity=0.176 Sum_probs=160.4
Q ss_pred cCCeEEEEeCCcccCCC--------ChHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHH
Q 007275 98 RGGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESL 168 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~--------~l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l 168 (609)
+++++|||+||++++++ .+++++++|+.+.+.|+++|||||||+++... +++++++.. +.+.+
T Consensus 11 ~~~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~~~~~~~~~g~~~~--------~~~~~ 82 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGIDRV--------EADNI 82 (255)
T ss_dssp BCSEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHTTCCHH--------HHHHH
T ss_pred cCCEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHHhhhHHHHcCCCCC--------ChHHH
Confidence 36899999999999864 27899999999999999999999999987444 667776531 12222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhhhHh-cCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHH
Q 007275 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRR-HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (609)
Q Consensus 169 ~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~-~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~L 247 (609)
.++...++..+... .|.+ +|++ +..+++.+...+. + .++...+..+
T Consensus 83 ---~~~~~~~~~~ll~~--------~l~~~~Gi~----a~~l~~~~~~~v~-~-----------------~~~~~~~~~l 129 (255)
T 2jjx_A 83 ---GTLGTIINSLMLRG--------VLTSKTNKE----VRVMTSIPFNAVA-E-----------------PYIRLRAVHH 129 (255)
T ss_dssp ---HHHHHHHHHHHHHH--------HHHHHCSSC----EEEEESSCCCSSS-E-----------------ECCHHHHHHH
T ss_pred ---hHHHHHHHHHHHHH--------HHHhhcCCc----eEEecHHHcCccc-C-----------------cccHHHHHHH
Confidence 33444666663332 3688 9987 6677776543221 1 2244444589
Q ss_pred HhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEe-cccccC-------CCCccccccCHHHHHHHHHhh
Q 007275 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQR 319 (609)
Q Consensus 248 L~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLT-Dvdgv~-------~~~~lI~~it~~e~~~l~~~~ 319 (609)
|+.|.|||+++ + +|. .++++|.+|+++|.+|+||+|+|+| ||||++ |++++|++++.+|+.++ +
T Consensus 130 L~~g~IpVi~g-g---~g~-~~vttD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G 201 (255)
T 2jjx_A 130 LDNGYIVIFGG-G---NGQ-PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---N 201 (255)
T ss_dssp HHTTCEEEEES-T---TSC-SSCCSHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---T
T ss_pred HhCCcEEEEeC-C---CCC-CccchHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---C
Confidence 99999999997 2 332 3578899999999999999999999 999983 35899999998665432 1
Q ss_pred chhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccC
Q 007275 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (609)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~ 399 (609)
+| +
T Consensus 202 -------------------------------------------------------~~-~--------------------- 204 (255)
T 2jjx_A 202 -------------------------------------------------------IQ-V--------------------- 204 (255)
T ss_dssp -------------------------------------------------------CC-S---------------------
T ss_pred -------------------------------------------------------Cc-c---------------------
Confidence 12 4
Q ss_pred CHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+ .|+..+.+.|++ ++|+|+..+++| .+++++++.||+|.++
T Consensus 205 m~~--~a~~~a~~~gi~-v~I~~~~~~~~l-~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 205 MDQ--AALLLARDYNLP-AHVFNFDEPGVM-RRICLGEHVGTLINDD 247 (255)
T ss_dssp SCH--HHHHHHHHHTCC-EEEEETTSTTHH-HHHHBTCCCSEEEESS
T ss_pred CHH--HHHHHHHHcCCe-EEEEeCCCchHH-HHHhcCCCCceEEecC
Confidence 653 244444458997 999999999975 5667888999999874
|
| >3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=218.24 Aligned_cols=190 Identities=16% Similarity=0.172 Sum_probs=140.3
Q ss_pred CeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECC-hHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGg-G~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~g~ 177 (609)
+++|+|+||+.+.+++ +++++++|+.+++.|+++|||||| |...+.++.... .+. .|+ +...++.+......
T Consensus 2 ~~iViK~GGssl~~~~~i~~va~~i~~~~~~g~~vvvV~sa~G~~t~~ll~~~~---~~~--~~~-~~~~~d~l~s~Ge~ 75 (600)
T 3l76_A 2 ALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQ---QIS--PNP-CRREMDMLLSTGEQ 75 (600)
T ss_dssp CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSSTHHHHHHHHHH---HHC--SSC-CHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcHHHHHHHHHHH---hhc--cCC-CHHHHHHHHHHhHH
Confidence 6899999999998866 789999999999999999999999 888776654211 110 122 45566655443445
Q ss_pred HHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEc
Q 007275 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (609)
Q Consensus 178 i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~ 257 (609)
++..+.+. .|+++|++ ++.+++.+..+++.... ..+++..++.+.|+.+|+.|.|||++
T Consensus 76 ~s~~l~~~--------~l~~~G~~----a~~l~~~~~~l~~~~~~---------~~~~~~~~~~~~i~~ll~~g~IpVv~ 134 (600)
T 3l76_A 76 VSIALLSL--------ALQEIDQP----AISLTGAQVGIVTEAEH---------SRARILEIRPDRLEHHLREGKVVVVA 134 (600)
T ss_dssp HHHHHHHH--------HHHHTTCC----EEEEEGGGTEEEEC----------------CCEEEECCHHHHHTTTCEEEEE
T ss_pred HHHHHHHH--------HHHhCCCC----eEEechhHcceEEecCC---------CCceeccccHHHHHHHHhCCCEEEEE
Confidence 77777655 47999998 88998888766654321 13345566777899999999999998
Q ss_pred CC-ccCCCC--cEEE---ecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHH
Q 007275 258 NL-GYSSSG--EVLN---CNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (609)
Q Consensus 258 ~~-~~~~~g--e~~~---id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~ 316 (609)
+. +.+.+| .+.+ +++|.+|+.+|.+|+||+|+++|||||++ |++++|++++.+|+.++.
T Consensus 135 Gf~g~~~~g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela 206 (600)
T 3l76_A 135 GFQGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELA 206 (600)
T ss_dssp CEEEC----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTG
T ss_pred CCeecCCCCCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHH
Confidence 74 566677 3333 35899999999999999999999999983 368999999999988774
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-21 Score=177.31 Aligned_cols=149 Identities=35% Similarity=0.698 Sum_probs=136.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
.+.+||+++++|++.+.+++.+.....+..+++.+.+...+..+++++.++++||++.+.+..+...++|..++|+|+||
T Consensus 2 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~~~V~p~~r 81 (150)
T 3e0k_A 2 NAEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYPYSEERKAEMACVAIHPDYR 81 (150)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHTTCC-CCCHHHHHHHGGGEEEEEETTEEEEEEEEEEEGGGTEEEEEEEEECGGGC
T ss_pred chheeecCCHhhHHHHHHHHHHHhhcccccccCHHHHHHHHHheEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHh
Confidence 45689999999999999999998888888899999999998889999999999999999877667789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeec
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
|+|+|++||+.+++++++.|++.+++.+.++.+||+++||+.++...+|..++..|++.+++++++|+|
T Consensus 82 g~Gig~~Ll~~~~~~a~~~g~~~i~l~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~~~~~~v~~k~l 150 (150)
T 3e0k_A 82 DGNRGLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFYEVGVDYLPGAKQGLYNFQRKSKILALDL 150 (150)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCCEEECCCSSCHHHHHHHTCCCCCGGGSCGGGHHHHTC-CCCCCCCCCC
T ss_pred ccCHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHcCCeecCcccChHHHHhhcCcccCccchhccC
Confidence 999999999999999999999999998778999999999999999999999999999999999999875
|
| >2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.6e-16 Score=171.72 Aligned_cols=197 Identities=16% Similarity=0.138 Sum_probs=132.7
Q ss_pred cCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCc--------cccc-----------
Q 007275 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE--------AKYL----------- 157 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~--------~~~~----------- 157 (609)
..+++|.|+||+.+.+.+ ++++++-|.. ..+.++|+|.++..-+...|-++... ....
T Consensus 25 ~~~~~V~KFGGTSva~~e~i~~va~iI~~--~~~~~~vVVVSA~g~~Td~Ll~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 102 (510)
T 2cdq_A 25 KGITCVMKFGGSSVASAERMKEVADLILT--FPEESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHI 102 (510)
T ss_dssp CCCCEEEEECTGGGSSHHHHHHHHHHHHH--CTTCCEEEEECCSTTHHHHHHHHHHHHTTTCTTTGGGCHHHHHHHHHHH
T ss_pred CCCeEEEEECCcccCCHHHHHHHHHHHHh--ccCCCEEEEEcCCCCCchHHHHHHHHHhhccccchhHHHHHHHHHHHHH
Confidence 457899999999998854 5666665532 23578888888754454444222100 0000
Q ss_pred ------------------------CC---ccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEe
Q 007275 158 ------------------------GR---YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVS 210 (609)
Q Consensus 158 ------------------------~g---~rvt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~ 210 (609)
.+ ....++..++.+......++..+... .|+++|++ +..++
T Consensus 103 ~i~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~r~~d~l~s~GE~~s~~ll~~--------~L~~~Gi~----A~~l~ 170 (510)
T 2cdq_A 103 RTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAA--------YLNTIGVK----ARQYD 170 (510)
T ss_dssp HHHHHHTCCSHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEC
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHhhhhccccCCHHHHHHHHHHHHHHHHHHHHH--------HHHHCCCC----EEEEE
Confidence 00 01112334444444444455555544 47999998 89999
Q ss_pred ecCCceeeeeecCcccCcCCcceeeEeee----CHHHHHH-HHhCCCeEEEcC-CccCC-CCcEEEec---HHHHHHHHH
Q 007275 211 VASGNFLAAKRKGVVDGVDYGATGEVKKV----DVTRMRE-RLDGGCLVILSN-LGYSS-SGEVLNCN---TYEVATACA 280 (609)
Q Consensus 211 ~~d~~~l~ak~~~~~~~~d~g~~G~v~~v----~~~~I~~-LL~~G~IPVi~~-~~~~~-~ge~~~id---~D~lAa~lA 280 (609)
+.+..+++... ++. +++..+ ..+.+.. |++.|.|||+++ .+.++ +|.+.+++ +|.+|+.+|
T Consensus 171 ~~~~~l~t~~~--------~~~-~~i~~~~~~~~~~~l~~~Ll~~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~lA 241 (510)
T 2cdq_A 171 AFEIGFITTDD--------FTN-GDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIG 241 (510)
T ss_dssp GGGTTCEECSC--------STT-CCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHH
T ss_pred hhHeeEEEecC--------CCc-cchhhHHHHHHHHHHHHHHHhCCcEEEEeCccccCCCCCceEEeCCCChHHHHHHHH
Confidence 99887776543 222 222222 2345554 789999999998 56667 89988877 999999999
Q ss_pred HHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 281 LAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 281 ~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
.+|+||.|+++|||||++ |++++|++++.+|+.++..
T Consensus 242 ~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~ 285 (510)
T 2cdq_A 242 KALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAY 285 (510)
T ss_dssp HHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHH
T ss_pred HHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHh
Confidence 999999999999999983 3689999999999888754
|
| >2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.5e-16 Score=170.60 Aligned_cols=193 Identities=17% Similarity=0.148 Sum_probs=127.9
Q ss_pred CCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccc------c-----------CCc
Q 007275 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY------L-----------GRY 160 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~------~-----------~g~ 160 (609)
.+++|.|+||+.+.+.+ ++++++-|. +...++|+|.|+..-+...|.++...... . +..
T Consensus 2 m~~~V~KFGGTSv~~~e~i~~va~ii~---~~~~~~vVVvSA~g~~Td~L~~~~~~~~~~~~~~~i~~i~~~~~~i~~~l 78 (449)
T 2j0w_A 2 SEIVVSKFGGTSVADFDAMNRSADIVL---SDANVRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERL 78 (449)
T ss_dssp -CCEEEEECSGGGSSHHHHHHHHHHHT---SCTTEEEEEECCCTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccEEEEECCccCCCHHHHHHHHHHHH---hcCCCEEEEeCCCCchHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHh
Confidence 36799999999998754 555555442 23458899999876676665554332000 0 000
Q ss_pred c-------------------------CCCHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCc
Q 007275 161 R-------------------------ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215 (609)
Q Consensus 161 r-------------------------vt~~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~ 215 (609)
. ...+..++.+......++..+... .|+++|++ ++.+++.+.
T Consensus 79 ~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~l~s~Ge~~s~~l~~~--------~L~~~Gi~----a~~l~~~~~- 145 (449)
T 2j0w_A 79 RYPNVIREEIERLLENITVLAEAAALATSPALTDELVSHGELMSTLLFVE--------ILRERDVQ----AQWFDVRKV- 145 (449)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH--------HHHTTSCC----EEECCGGGT-
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCcCHHHHHHHHHHHHHHHHHHHHH--------HHHHCCCc----EEEEchHHh-
Confidence 0 012344444443333444444444 47899988 888888876
Q ss_pred eeeeeecCcccCcCCcceeeEeeeC-----HHHHHHHHhCCCeEEEcC-CccCCCCcEEEec---HHHHHHHHHHHcCCC
Q 007275 216 FLAAKRKGVVDGVDYGATGEVKKVD-----VTRMRERLDGGCLVILSN-LGYSSSGEVLNCN---TYEVATACALAIEAD 286 (609)
Q Consensus 216 ~l~ak~~~~~~~~d~g~~G~v~~v~-----~~~I~~LL~~G~IPVi~~-~~~~~~ge~~~id---~D~lAa~lA~~L~Ad 286 (609)
+++.. +|+. +++...+ .+.++.|++.+ |||+++ .+.+++|.+.+++ +|.+|+.+|.+|+||
T Consensus 146 l~t~~--------~~~~-~~~~~~~~~~~~~~~l~~l~~~~-IpVv~Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~Ad 215 (449)
T 2j0w_A 146 MRTND--------RFGR-AEPDIAALAELAALQLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHAS 215 (449)
T ss_dssp CBBCS--------CTTS-CCBCHHHHHHHHHHHTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCS
T ss_pred eeecC--------CCCC-ccccHhHhHHHHHHHHHHHhcCC-EEEEeCCeeeCCCCCEEEeCCCChHHHHHHHHHHCCCC
Confidence 55432 2332 2222222 33566677655 999985 5667888888887 999999999999999
Q ss_pred EEEEEecccccC-------CCCccccccCHHHHHHHHH
Q 007275 287 KLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (609)
Q Consensus 287 ~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~ 317 (609)
+|+++|||||++ |++++|++++.+|+.++..
T Consensus 216 ~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~ 253 (449)
T 2j0w_A 216 RVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMAT 253 (449)
T ss_dssp EEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHH
T ss_pred EEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHh
Confidence 999999999983 3689999999999988853
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.67 E-value=7.4e-16 Score=145.88 Aligned_cols=146 Identities=18% Similarity=0.206 Sum_probs=116.4
Q ss_pred cccccccCCcCCHHHHHHHHhhhHh-----hccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~-----~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~ 518 (609)
|...||+++++|++.+.++++.... .....+++.+.+..++ ..+|+++.++++||++.+.+......++|..
T Consensus 23 m~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~i~~ 102 (182)
T 3kkw_A 23 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGN 102 (182)
T ss_dssp CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred ccEEEEeCCHHHHHHHHHHHHhHHHHhhhccccCCCCCHHHHHHHhcCCccEEEEEeCCeEEEEEEEEeecCCceEEEEE
Confidence 5578999999999999999877522 2223567777777765 4578889999999999998766667899999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEe
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 593 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mk 593 (609)
++|+|+|||||+|++|++.++++|++. +++.+.+.+ .++.+||+++||+.++..... ..+......++|+
T Consensus 103 l~V~p~~rg~Gig~~Ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-----~~~g~~~~~~~m~ 177 (182)
T 3kkw_A 103 MMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERH-----DPDGRRVALIQMD 177 (182)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE-----CTTSCEEEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHCCCeEecccccc-----ccCCcEEeEEEEe
Confidence 999999999999999999999999998 888998877 478999999999998866321 1112223577787
Q ss_pred ecCC
Q 007275 594 KLLP 597 (609)
Q Consensus 594 kll~ 597 (609)
|.|.
T Consensus 178 k~L~ 181 (182)
T 3kkw_A 178 KPLE 181 (182)
T ss_dssp EECC
T ss_pred eccC
Confidence 7653
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-15 Score=144.42 Aligned_cols=125 Identities=16% Similarity=0.185 Sum_probs=99.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCH-------------HHHHhhc----CeEEEEEECCEEEEEEEEEEecC-
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DSFYVVEREGQIIACAALFPFFK- 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~-------------e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~- 510 (609)
..||+++++|++.|.++........+....+. +.+...+ ..++|++.++++|||+.+.+...
T Consensus 3 ~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~~~ivG~~~~~~~~~~ 82 (180)
T 1tiq_A 3 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 82 (180)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred eEEEECCHHhHHHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCHHHHHHHHcCCCceEEEEEECCEEEEEEEEEeCCCc
Confidence 56999999999999998876544433222222 2232222 24788888999999999985432
Q ss_pred -----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 511 -----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 511 -----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
...++|..++|+|+|||||+|++||+.++++|++.|++.+.|.+ .+|++||+|+||+.++...
T Consensus 83 ~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~g~~~ 154 (180)
T 1tiq_A 83 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHS 154 (180)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCCcEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHHcCCEEcCcEE
Confidence 35789999999999999999999999999999999999999988 4799999999999988753
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.6e-15 Score=135.85 Aligned_cols=143 Identities=20% Similarity=0.224 Sum_probs=104.0
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhcc---CccCCHHHHHhh----cCeEEEEEE-CCEEEEEEEEEEecCCCeEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA----LDSFYVVER-EGQIIACAALFPFFKEKCGEVAA 518 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~----i~~~~V~~~-dg~IVG~~~l~~~~~~~~~eI~~ 518 (609)
|+..||+++++| +.+..++........ ............ ...+++++. ++++||++.+.+. ....++|..
T Consensus 2 ~~~~ir~~~~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~i~~ 79 (162)
T 3lod_A 2 AMYTITDIAPTD-AEFIALIAALDAWQETLYPAESNHLLDLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKR 79 (162)
T ss_dssp CCCEEEECCTTS-HHHHHHHHHHHHHTTCC---------GGGTSCGGGEEEEEEECSSCCEEEEEEEEEC-TTSEEEEEE
T ss_pred CceEEEECCCCC-HHHHHHHHHHHHhccccCChhHhhhhhHHhCCCCCcEEEEEECCCCCEEEEEEEEEc-CCCeEEEEE
Confidence 556899999999 777777765332221 111111111111 135788888 9999999999854 567899999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEee
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 594 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkk 594 (609)
++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+++||+..+... .|. .....++|.|
T Consensus 80 ~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~~~-------~~~-~~~~~~~m~k 151 (162)
T 3lod_A 80 VYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFA-------PYQ-PDPLSVFMEK 151 (162)
T ss_dssp EEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECCCT-------TCC-CCSSEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEccccc-------ccC-CCCccEEEEE
Confidence 999999999999999999999999999999999987 3689999999999987642 122 2334677777
Q ss_pred cCCCC
Q 007275 595 LLPDT 599 (609)
Q Consensus 595 ll~~~ 599 (609)
.|...
T Consensus 152 ~l~~~ 156 (162)
T 3lod_A 152 PLFAD 156 (162)
T ss_dssp ECC--
T ss_pred ecCCC
Confidence 66543
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-15 Score=140.67 Aligned_cols=136 Identities=16% Similarity=0.187 Sum_probs=103.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecC----------CCeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----------EKCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~----------~~~~ 514 (609)
..||+++++|++.+.++...... ..++.+.+...+ ..+++++.++++||++.+....+ ...+
T Consensus 13 ~~iR~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~ 88 (168)
T 2x7b_A 13 FTLRNARMDDIDQIIKINRLTLP----ENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKG 88 (168)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCS----CCCCHHHHHHHHHHHGGGCEEEEETTEEEEEEEEEEEEEECSSCSSCCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHCC----CCccHHHHHHHHhcCCceEEEEEECCeEEEEEEEEEeccccccccccCCCcEE
Confidence 46999999999999998765332 223333333222 45678888999999998874322 1367
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
+|..++|+|+|||||+|++||+.++++|++. |+++|++.+ .+|.+||+|+||+..+.... .|. ...+.
T Consensus 89 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~~~------~~~-~g~~~ 161 (168)
T 2x7b_A 89 HVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKG------YYA-DGEDA 161 (168)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCEEEEEETT------CST-TSCCE
T ss_pred EEEEEEECHHHhccCHHHHHHHHHHHHHHHhcCeeEEEEEEEeCCHHHHHHHHHCCCEEEEEeec------ccC-CCCcE
Confidence 8999999999999999999999999999998 999999987 47999999999999876521 122 23466
Q ss_pred eEEeec
Q 007275 590 YYMKKL 595 (609)
Q Consensus 590 i~mkkl 595 (609)
++|.+.
T Consensus 162 ~~m~~~ 167 (168)
T 2x7b_A 162 YLMARP 167 (168)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 777654
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.3e-15 Score=134.70 Aligned_cols=126 Identities=18% Similarity=0.231 Sum_probs=104.4
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc-----cCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~-----~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~ 518 (609)
|...||+++.+|++.+.+++....... ...+++.+.+..++ ..++++..++++||++.+.+......++|..
T Consensus 1 M~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~ 80 (160)
T 2i6c_A 1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGN 80 (160)
T ss_dssp CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred CceEeccCCHHHHHHHHHHHhhHHHHhccCccccCccCHHHHHHHhccCCceEEEEeCCeEEEEEEEEEEcCCCceEEEE
Confidence 346799999999999999987643221 12456666666655 3567888899999999998766667799999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++|+|+|||+|+|++|++.+++++++ .|++.+.+.+ .++.+||+++||+..+..
T Consensus 81 ~~v~p~~rg~Gig~~l~~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 139 (160)
T 2i6c_A 81 MMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIA 139 (160)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHcCCEEcccc
Confidence 99999999999999999999999999 7999999987 378999999999998854
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=138.05 Aligned_cols=124 Identities=13% Similarity=0.112 Sum_probs=98.4
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeE-EEEEECCEEEEEEEEEEecCCCeEEEEEEE
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSF-YVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~-~V~~~dg~IVG~~~l~~~~~~~~~eI~~ia 520 (609)
+|+..+|+++++|++.+.++......... .+..+...... ..+ ++.+.++++||++.+.+. ..+.++|..++
T Consensus 2 ~M~~~ir~~~~~d~~~i~~l~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~ 78 (147)
T 3efa_A 2 NAMKIIFSASPANRAAAYALRQAVFVEER--GISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQ-ADHVMRFGRVC 78 (147)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHTTTTT--CCCHHHHSCTTCSTTCCEEEEEEETTEEEEEEEEEEC-STTEEEEEEEE
T ss_pred chhHHhHcCCHhHHHHHHHHHHHHhhhcc--CCCcHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEeC-CCCeEEEEEEE
Confidence 35678999999999999999776543221 22222111111 234 344489999999999854 56789999999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
|+|+|||+|+|++|++.+++++++.|++.+++.+ ..+.+||+++||+..+..
T Consensus 79 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~Gf~~~~~~ 131 (147)
T 3efa_A 79 TRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGP 131 (147)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEECC
T ss_pred EcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeccHHHHHHHHHcCCcccCCc
Confidence 9999999999999999999999999999999988 478999999999998754
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.6e-15 Score=133.37 Aligned_cols=128 Identities=16% Similarity=0.241 Sum_probs=103.5
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHH------HHHhhc----CeEEEEEECCE-EEEEEEEEEecCCCeEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE------ELLKAL----DSFYVVEREGQ-IIACAALFPFFKEKCGE 515 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e------~l~~~i----~~~~V~~~dg~-IVG~~~l~~~~~~~~~e 515 (609)
|...||+++++|.+.+.+++.......+...+..+ .+...+ ..++++..+++ +||++.+.+. .+..++
T Consensus 2 m~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~ 80 (163)
T 3d8p_A 2 MAINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRL-DNNMSA 80 (163)
T ss_dssp -CCEEEECCGGGHHHHHHHHHHHHHTTSCCSCCGGGCGGGGCHHHHTTTTTCEEEEEECTTCCEEEEEEEEEC-STTEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHHHHHhhCCCCccccchHHHHHHHHHhcCCceEEEEEeCCCeEEEEEEEEec-CCCEEE
Confidence 44679999999999999999876655554333321 233322 45788888888 9999998753 466789
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+|+||+..+....+
T Consensus 81 i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~ 144 (163)
T 3d8p_A 81 LKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLP 144 (163)
T ss_dssp EEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEEECGGGSC
T ss_pred EEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEEeeeccch
Confidence 999999999999999999999999999999999999988 378999999999999876555
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.6e-15 Score=135.03 Aligned_cols=121 Identities=21% Similarity=0.255 Sum_probs=94.6
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccCccCCHH----HHHhhc----CeEEEEEECCEEEEEEEEEEecC-----CC
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE----ELLKAL----DSFYVVEREGQIIACAALFPFFK-----EK 512 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e----~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~-----~~ 512 (609)
+|...||+++++|++.+.++++....... ..+.+ .+...+ ..+++++.++++||++.+..... ..
T Consensus 3 ~m~~~iR~~~~~D~~~i~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (150)
T 2dxq_A 3 SDAISLRAAGPGDLPGLLELYQVLNPSDP--ELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRAARP 80 (150)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHCTTSC--CCCHHHHHHHHHHHHHSTTEEEEEEEETTEEEEEEEEEEECCSHHHHCC
T ss_pred CCceEEEECChhhHHHHHHHHHHhccccc--cccHHHHHHHHHHHhcCCCceEEEEecCCEEEEEEEEEEecccccCCCc
Confidence 34567999999999999999876543222 12222 122211 34678888999999999875432 23
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeE
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 568 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~ 568 (609)
.++|..++|+|+|||||+|++||+.++++|++.|+.++.+.+ .++++||+|+||+.
T Consensus 81 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~ 140 (150)
T 2dxq_A 81 YAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQ 140 (150)
T ss_dssp EEEEEEEECCGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTTCEE
T ss_pred eEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcCCcc
Confidence 588999999999999999999999999999999999999988 37999999999993
|
| >4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.4e-15 Score=139.26 Aligned_cols=124 Identities=22% Similarity=0.275 Sum_probs=95.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc----cCccCCHHHHHh-hc--------CeEEEEEECCEEEEEEEEEEecC--CCe
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG----ALVRRTDEELLK-AL--------DSFYVVEREGQIIACAALFPFFK--EKC 513 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~----~~~~~~~e~l~~-~i--------~~~~V~~~dg~IVG~~~l~~~~~--~~~ 513 (609)
..||+++++|++.|.+++++..... +..+.+.+.... +. ..+++++.||++||++.+.+... ...
T Consensus 9 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~~~~~~~~~~~ 88 (173)
T 4h89_A 9 LQVRDAEDADWPAILPFFREIVSAGETYAYDPELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANMYPNRPGPGAH 88 (173)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSCCCCTTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEEEESSSGGGTT
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhhcCCCceEEEEEEeCCeEEEEEEEEecCCCCCce
Confidence 4699999999999999988755443 223344444333 22 13556667899999999986432 233
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-----HHHHHHHHHCCCeEeeee
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-----~~a~~fYek~GF~~~~~~ 572 (609)
..+..++|+|+|||||+|++||+.++++|++.|++.+.+.+ .++++||+|+||+.++..
T Consensus 89 ~~~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~~~G~~ 152 (173)
T 4h89_A 89 VASASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSLGFRVIGTV 152 (173)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeEEEEeeccchHHHHHHHHHHHHHHHCCCcEEEEeeecccCHHHHHHHHHCCCEEEEEE
Confidence 44558999999999999999999999999999999987642 378999999999999864
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-14 Score=131.40 Aligned_cols=142 Identities=20% Similarity=0.242 Sum_probs=111.1
Q ss_pred ccccCCcCCHHHHHHHHhhhHhh-------ccC-ccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVES-------GAL-VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~-------~~~-~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~i 519 (609)
.||+++++|++.+.+++...... .+. ...+.+.+..++ ..+++++.++++||++.+.+.......++..+
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~ 81 (162)
T 2fia_A 2 KIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKRF 81 (162)
T ss_dssp CEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEEE
T ss_pred cchhCCHhhHHHHHHHHHHHHHHHhccCcccCCCCCCCHHHHHHHHHhCcEEEEEECCEEEEEEEEeeCCCCCceEEEEE
Confidence 58999999999999998774331 121 223455555554 56788889999999999986554466889999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccC-CCceeEEee
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKK 594 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~-~~s~i~mkk 594 (609)
+|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+++||+..+..... +.. ....++|.+
T Consensus 82 ~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~-------~~~~~~~~~~m~k 154 (162)
T 2fia_A 82 ATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQM-------NRLDFGSFYLYVK 154 (162)
T ss_dssp EECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEECCT-------TCGGGCCEEEEEE
T ss_pred EEcccccCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEeeEeec-------cccCccceEEEEE
Confidence 99999999999999999999999999999999988 478999999999999877543 111 345677777
Q ss_pred cCCC
Q 007275 595 LLPD 598 (609)
Q Consensus 595 ll~~ 598 (609)
.+++
T Consensus 155 ~l~~ 158 (162)
T 2fia_A 155 ELEN 158 (162)
T ss_dssp ECC-
T ss_pred EcCC
Confidence 7654
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-15 Score=140.83 Aligned_cols=124 Identities=23% Similarity=0.328 Sum_probs=98.1
Q ss_pred ccccCCcCCHHHHHHHHhhhHhh---ccCccCCHHHHHh----hc---------CeEEEEEECCEEEEEEEEEEec----
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLK----AL---------DSFYVVEREGQIIACAALFPFF---- 509 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~---~~~~~~~~e~l~~----~i---------~~~~V~~~dg~IVG~~~l~~~~---- 509 (609)
.||+++++|++.|.+++...... .+...++.+.+.. .+ ..++|++.+++++|++.+.+..
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~ 82 (199)
T 1u6m_A 3 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 82 (199)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred ccccCChHHHHHHHHHHHHHHhhhHHHHhccCCHHHHHHHHHHHHhCCCCccccccEEEEEECCeEEEEEEEecCcHHHH
Confidence 49999999999999998875443 1222334433221 11 2478999999999999876421
Q ss_pred --------------------------CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHH
Q 007275 510 --------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 559 (609)
Q Consensus 510 --------------------------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~ 559 (609)
....++|..|+|+|+|||+|+|++||+.++++|++.|++.+.|.| .+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~ 162 (199)
T 1u6m_A 83 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 162 (199)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred HHHHHHHHHHHcCccccccceecccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHH
Confidence 124578999999999999999999999999999999999999988 37999
Q ss_pred HHHHCCCeEeeeec
Q 007275 560 WFKSRGFRECSIEM 573 (609)
Q Consensus 560 fYek~GF~~~~~~~ 573 (609)
||+|+||+.++...
T Consensus 163 fY~k~GF~~~~~~~ 176 (199)
T 1u6m_A 163 LYASKGFKDVTTMT 176 (199)
T ss_dssp HHHTTTCEEEEEEE
T ss_pred HHHHCCCEEccEEE
Confidence 99999999988754
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.9e-15 Score=137.76 Aligned_cols=124 Identities=17% Similarity=0.177 Sum_probs=102.0
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCC-------------HHHHHhhc----Ce----EEEEEECCEEEEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------------DEELLKAL----DS----FYVVEREGQIIACAAL 505 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~-------------~e~l~~~i----~~----~~V~~~dg~IVG~~~l 505 (609)
|.+.||+++++|++.+.++........+....+ .+.+...+ .. +++++.++++||++.+
T Consensus 25 m~i~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~ 104 (183)
T 3fix_A 25 MSIEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIEL 104 (183)
T ss_dssp SCEEEEECCGGGHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTCHHHHHHHHHHHHTTSSEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeCCHhhHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHhcChHHHHHHHccccccccceEEEEEeCCEEEEEEEE
Confidence 557899999999999999988755543332222 22222222 23 8889999999999999
Q ss_pred EEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 506 FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 506 ~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.+. ...++|..++|+|+|||+|+|++|++.++++|++.|++.+.+.+ .++.+||+++||+.++..
T Consensus 105 ~~~--~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~ 173 (183)
T 3fix_A 105 KII--ANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTD 173 (183)
T ss_dssp EEE--TTEEEEEEEEECGGGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred EeC--CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEeccc
Confidence 854 67899999999999999999999999999999999999999988 479999999999998765
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-14 Score=131.59 Aligned_cols=117 Identities=19% Similarity=0.302 Sum_probs=93.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCC--HHHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~--~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
..||+++++|++.+.++++.. ....++. .+.+...+ ..+++++.++++||++.+.. +...++|..++|+
T Consensus 4 ~~ir~~~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~--~~~~~~i~~l~V~ 78 (144)
T 2pdo_A 4 MEIRVFRQEDFEEVITLWERC---DLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGY--DGHRGSAYYLGVH 78 (144)
T ss_dssp EEEEECCGGGHHHHHHHHHHT---TCCBTTBCHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEE--CSSCEEEEEEEEC
T ss_pred eEEEECchhhHHHHHHHHhcc---cccCCccchHHHHHHHhhCCCccEEEEEcCCcEEEEEEeec--CCCceEEEEEEEC
Confidence 469999999999999987654 1122221 22333322 45788889999999998763 3456899999999
Q ss_pred ccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 523 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
|+|||||+|++||+.+++++++.|++.+.+.+ ..+.+||+++||+..+
T Consensus 79 p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~~~~ 130 (144)
T 2pdo_A 79 PEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHAD 130 (144)
T ss_dssp GGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHTTCEECS
T ss_pred ccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCcccc
Confidence 99999999999999999999999999999877 4789999999999853
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-14 Score=132.30 Aligned_cols=146 Identities=14% Similarity=0.138 Sum_probs=110.8
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCC--CeEEEEEEE
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKE--KCGEVAAIG 520 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~--~~~eI~~ia 520 (609)
.+.+.||+++++|++.+.++..... ...++.+.+...+ ..++++..++++||++.+.+.... ..++|..++
T Consensus 4 ~~~~~ir~~~~~D~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~i~~~~ 79 (170)
T 2ob0_A 4 GSRIELGDVTPHNIKQLKRLNQVIF----PVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLG 79 (170)
T ss_dssp TCSEEEEECCTTTHHHHHHHHHHHC----SSCCCHHHHHHHTTSGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcEEEEECCHhhHHHHHHHHHHHc----ccccCHHHHHHHhcCCCcEEEEEECCeEEEEEEEEEEecCCCcEEEEEEEE
Confidence 3456799999999999999976643 3345555555544 357888889999999998754322 478999999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhc-ccCCCceeEEee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRI-NLSRNSKYYMKK 594 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y-~~~~~s~i~mkk 594 (609)
|+|+|||+|+|++|++.+++++++. |++.+.+.+ ..+.+||+++||+..+.... .| +....+.++|.+
T Consensus 80 v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~------~~~~g~~~~~~~m~~ 153 (170)
T 2ob0_A 80 CLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKN------YYKRIEPADAHVLQK 153 (170)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEEEEEETT------CCSSSSSCCEEEEEE
T ss_pred ECHHHcCcCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHcCCEEeEeeec------cccCCCCCccEEEEE
Confidence 9999999999999999999999998 999999988 27899999999999877531 11 122356778877
Q ss_pred cCCCCCC
Q 007275 595 LLPDTSG 601 (609)
Q Consensus 595 ll~~~~g 601 (609)
.++...+
T Consensus 154 ~l~~~~~ 160 (170)
T 2ob0_A 154 NLKVPSG 160 (170)
T ss_dssp EC-----
T ss_pred eccCCcc
Confidence 7765554
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.4e-14 Score=130.66 Aligned_cols=125 Identities=17% Similarity=0.135 Sum_probs=103.9
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhcc-CccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEec-------------
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~------------- 509 (609)
.+.||+++.+|++.+.++......... ..+++.+.+...+ ..++++..++++||++.+.+..
T Consensus 5 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 84 (166)
T 1cjw_A 5 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 84 (166)
T ss_dssp SSEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred ceeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCCcEEEEEECCeEEEEEEeeeecccccccccccccc
Confidence 357999999999999999877544322 2356666666655 4678888999999999988652
Q ss_pred -CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 510 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 -~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
....++|..++|+|+|||+|+|++|++.+++++++. |++.+.+.+ .++.+||+++||+..+..
T Consensus 85 ~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~ 150 (166)
T 1cjw_A 85 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPC 150 (166)
T ss_dssp TTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEEC
T ss_pred CCCCceEEEEEEECHhhccCChHHHHHHHHHHHHHHhcCcceEEEecCchHHHHHHHcCCeECCcc
Confidence 357789999999999999999999999999999995 999998876 478999999999999864
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=7.5e-15 Score=136.82 Aligned_cols=144 Identities=20% Similarity=0.214 Sum_probs=101.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCc----cCCHHHHHhhc-CeEEEEE-ECCEEEEEEEEEEecC----CCeEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL-DSFYVVE-REGQIIACAALFPFFK----EKCGEVAA 518 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~----~~~~e~l~~~i-~~~~V~~-~dg~IVG~~~l~~~~~----~~~~eI~~ 518 (609)
..||+++++|++.+.+++.......+.. ..+.+.+..++ ...+++. .++++||++.+.+... ...+++ .
T Consensus 8 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~-~ 86 (166)
T 2ae6_A 8 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL-S 86 (166)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE-E
T ss_pred eEEEEcCHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHhccCeEEEEeeCCEEEEEEEEEeccccCCCceEEEE-E
Confidence 4699999999999999987644322211 11222344444 4445555 7999999999985411 245666 8
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEee
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 594 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkk 594 (609)
++|+|+|||||+|++||+.++++|++.|++++.+.+ .++++||+|+||+..+...... ..+....+.++|.+
T Consensus 87 l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~~~~~----~~~g~~~d~~~m~~ 162 (166)
T 2ae6_A 87 IGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHFKEEF----YINGHYCDDYQYAY 162 (166)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEEEEEE
T ss_pred EEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHcCCEEeeEEcceE----EECCEEchhhhhhH
Confidence 999999999999999999999999999999999988 3799999999999987653110 00111236677777
Q ss_pred cCC
Q 007275 595 LLP 597 (609)
Q Consensus 595 ll~ 597 (609)
++.
T Consensus 163 ~~~ 165 (166)
T 2ae6_A 163 FIE 165 (166)
T ss_dssp EC-
T ss_pred Hhc
Confidence 764
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=9.1e-15 Score=137.78 Aligned_cols=146 Identities=25% Similarity=0.360 Sum_probs=107.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc---c-CccCCHHHHHhhc------CeEEEEEEC-CEEEEEEEEEEecC----CC
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG---A-LVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFK----EK 512 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~---~-~~~~~~e~l~~~i------~~~~V~~~d-g~IVG~~~l~~~~~----~~ 512 (609)
...||+++++|++.+.+++....... + ..+++.+.+..++ ..++|++.+ +++||++.+.+... ..
T Consensus 2 ~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~ 81 (175)
T 1vhs_A 2 SLTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNK 81 (175)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTT
T ss_pred ceEEEeCCHHHHHHHHHHHHHHhhcCCcccccccCCHHHHHHHHHhcCCCceEEEEEcCCCcEEEEEEEeccCCCCccCC
Confidence 35799999999999999988754332 1 1234444333322 347788877 99999999985432 23
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCc
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 588 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s 588 (609)
.+++ .++|+|+|||||+|++||+.++++|++.|+++|.+.+ .+|++||+|+||+..+...-.. ..+....+
T Consensus 82 ~~e~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~yek~GF~~~g~~~~~~----~~~g~~~d 156 (175)
T 1vhs_A 82 TAEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIA----EMDGKRYD 156 (175)
T ss_dssp EEEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEE
T ss_pred EEEE-EEEEChhhcCCCHHHHHHHHHHHHHHhCCceEEEEEEecCCHHHHHHHHHCCCEEEeEcccce----eeCCEEEE
Confidence 4666 8999999999999999999999999999999999987 4799999999999987642110 01112246
Q ss_pred eeEEeecCCC
Q 007275 589 KYYMKKLLPD 598 (609)
Q Consensus 589 ~i~mkkll~~ 598 (609)
.++|.++++.
T Consensus 157 ~~~m~~~~~~ 166 (175)
T 1vhs_A 157 LKILGRELSE 166 (175)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEECCC
Confidence 6778777754
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-14 Score=135.36 Aligned_cols=147 Identities=15% Similarity=0.175 Sum_probs=111.7
Q ss_pred cccccccccCC--cCCHHHHHHHHhhhHhhccCccCCH------HHHHhhc----CeEEEEEECCEEEEEEEEEEecCCC
Q 007275 445 SDLYEGTRTAK--VTDLSGIKQIIQPLVESGALVRRTD------EELLKAL----DSFYVVEREGQIIACAALFPFFKEK 512 (609)
Q Consensus 445 ~d~~~~IR~a~--~~D~~~I~~L~~~~~~~~~~~~~~~------e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~ 512 (609)
+.+..+||+++ ++|++.+.+++.......+..++.. +.+..++ ..+|+++.++++||++.+... ...
T Consensus 16 ~~~~~~iR~~~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~-~~~ 94 (181)
T 2q7b_A 16 YFQGMEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI-DDK 94 (181)
T ss_dssp -CTTEEEEECCCCHHHHHHHHHHHHHHHHTTSCCCCCGGGGGGGGCHHHHTGGGTCEEEEEEETTEEEEEEEEEEC-SSS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCccccchHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEc-CCC
Confidence 44556799999 9999999999987655443322221 2233332 468888899999999999854 456
Q ss_pred eEEEEEEEEcccCcC--CcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCC
Q 007275 513 CGEVAAIGVSPECRG--QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSR 586 (609)
Q Consensus 513 ~~eI~~iaV~p~~Rg--qGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~ 586 (609)
.++|..++|+|+||| +|+|++|++.+++++++.|++.+.+.+ .++.+||+|+||+..+...++. .|....
T Consensus 95 ~~~i~~~~V~p~~rg~~~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~~~~ 170 (181)
T 2q7b_A 95 TAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDV----DYIFPD 170 (181)
T ss_dssp EEEEEEEEECGGGSSTTTCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEECTTTCCC----SCCCCS
T ss_pred EEEEEEEEEChhhcCccccHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHCCCEEeeeeeccc----cccCCC
Confidence 799999999999999 999999999999999999999999988 3689999999999988765432 233334
Q ss_pred CceeEEeecC
Q 007275 587 NSKYYMKKLL 596 (609)
Q Consensus 587 ~s~i~mkkll 596 (609)
...++|.+.|
T Consensus 171 ~~~~~~~~~L 180 (181)
T 2q7b_A 171 RDSRIYVKLL 180 (181)
T ss_dssp SSEEEEEEEC
T ss_pred cceeeEEEec
Confidence 4556665543
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.2e-14 Score=130.56 Aligned_cols=146 Identities=18% Similarity=0.124 Sum_probs=112.4
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc----CccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecC---CCeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~---~~~~ 514 (609)
+.||+++++|++.+.+++.......+ ..+++.+.+..++ ..+++++.++++||++.+.+... ....
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 83 (174)
T 3dr6_A 4 MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYT 83 (174)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHSSTTTTCCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred eEEeeCChhhHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhcccCceEEEEecCCeEEEEEEEeecCCCCCcceE
Confidence 46999999999999999988655432 1345666555443 45788899999999999975433 2357
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCcee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 590 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i 590 (609)
++..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+++||+.++...... ..+....+.+
T Consensus 84 ~~~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~~~~----~~~g~~~~~~ 159 (174)
T 3dr6_A 84 VEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVG----VKFGRWLDLT 159 (174)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEE
T ss_pred EEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCCEEEEEccceE----EECCeeEEEE
Confidence 8889999999999999999999999999999999999887 4789999999999988753110 1112224567
Q ss_pred EEeecCCC
Q 007275 591 YMKKLLPD 598 (609)
Q Consensus 591 ~mkkll~~ 598 (609)
+|.+.+..
T Consensus 160 ~m~~~l~~ 167 (174)
T 3dr6_A 160 FMQLQLDE 167 (174)
T ss_dssp EEEEECCC
T ss_pred EEEeeccC
Confidence 78777764
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-14 Score=135.13 Aligned_cols=124 Identities=25% Similarity=0.321 Sum_probs=95.1
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc---cCccCCHHHHHhh-c-----CeEEEEEE--------CCEEEEEEEEEEec
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKA-L-----DSFYVVER--------EGQIIACAALFPFF 509 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~---~~~~~~~e~l~~~-i-----~~~~V~~~--------dg~IVG~~~l~~~~ 509 (609)
|...||+++++|++.|.+++....... ...+++.+.+... . ..++|++. ++++|||+.+....
T Consensus 2 m~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ivG~~~~~~~~ 81 (170)
T 2bei_A 2 ASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIY 81 (170)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEE
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHhcCCCCcEEEEEEEeccccCCCCCCcEEEEEEEEeec
Confidence 446799999999999999987643221 1234555555432 1 23467776 78999999876322
Q ss_pred ---CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 510 ---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 510 ---~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
....++|..++|+|+|||||+|++||+.++++|++.|++.+.|.+ .+|.+||+|+||+..+
T Consensus 82 ~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~~ 149 (170)
T 2bei_A 82 STWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLT 149 (170)
T ss_dssp ETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHH
T ss_pred cccCCCcEEEEEEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHCCCEecc
Confidence 124578999999999999999999999999999999999999987 3799999999999754
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.5e-15 Score=136.29 Aligned_cols=124 Identities=18% Similarity=0.214 Sum_probs=102.1
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh--------cCeEEEEEECCEEEEEEEEEEec--CCCeEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--------LDSFYVVEREGQIIACAALFPFF--KEKCGEV 516 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~--------i~~~~V~~~dg~IVG~~~l~~~~--~~~~~eI 516 (609)
|.+.||+++++|.+.+.+++.......+. +..+....+ ...+++++.++++||++.+.+.. ....++|
T Consensus 2 M~~~ir~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~i 79 (150)
T 3gy9_A 2 MDVTIERVNDFDGYNWLPLLAKSSQEGFQ--LVERMLRNRREESFQEDGEAMFVALSTTNQVLACGGYMKQSGQARTGRI 79 (150)
T ss_dssp CCCEEEECSCGGGSCCHHHHHHHHHTTCC--HHHHHHHTTTTSCSCSTTCEEEEEECTTCCEEEEEEEEECTTSTTEEEE
T ss_pred CcEEEEECcccCHHHHHHHHHHHHHhccc--chHHHHHHHHHhhhcCCCcEEEEEEeCCeEEEEEEEEeccCCCCCeEEE
Confidence 44679999999999999998877666442 111222222 24678889999999999998543 5678999
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeeec
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~~ 573 (609)
..++|+|+|||||+|++||+.+++++++ |+..+.+.+..+.+||+|+||+.++...
T Consensus 80 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~~i~l~~~~a~~~y~k~GF~~~~~~~ 135 (150)
T 3gy9_A 80 RHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYSEQADPFYQGLGFQLVSGEK 135 (150)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHTT-TCSEEEECCSSCHHHHHHTTCEECCCSS
T ss_pred EEEEECHhhcCCCHHHHHHHHHHHHHHh-CCCEEEEechHHHHHHHHCCCEEeeeee
Confidence 9999999999999999999999999999 9999999887899999999999986654
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.1e-15 Score=135.53 Aligned_cols=122 Identities=20% Similarity=0.227 Sum_probs=94.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCc-----cCC---HHHHHhh----cCeEEEEEECCEEEEEEEEEEec--------
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALV-----RRT---DEELLKA----LDSFYVVEREGQIIACAALFPFF-------- 509 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~-----~~~---~e~l~~~----i~~~~V~~~dg~IVG~~~l~~~~-------- 509 (609)
.||+++++|++.+.+++.......... .+. .+.+... ...+||++.++++|||+.+....
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 82 (153)
T 2q0y_A 3 ECRPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAPLAGIGLMVIEWPPHPSHP 82 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSEEEEEEETTEEEEEEEEEEEECCCBTTBT
T ss_pred EEEECCHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHHHHHHhcCCCeeEEEEEeCCeEEEEEEEEeeccCCCCCCC
Confidence 589999999999999987654432110 110 1111111 23578888999999999886421
Q ss_pred -CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeee
Q 007275 510 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSI 571 (609)
Q Consensus 510 -~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~ 571 (609)
....++|..++|+|+|||||+|++||+.++++|++.|++.++|.++ .+.+||+|+||+..+.
T Consensus 83 ~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~~~~~A~~fY~k~GF~~~~~ 146 (153)
T 2q0y_A 83 LQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEMGQPLYARMGWSPTTE 146 (153)
T ss_dssp TCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECCCTTTHHHHHHTTCCCCCC
T ss_pred CCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCHHHHHHHHHcCCccchh
Confidence 1245789999999999999999999999999999999999999884 7899999999998763
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.9e-14 Score=132.64 Aligned_cols=145 Identities=14% Similarity=0.237 Sum_probs=107.3
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC----ccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecC---CCe
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKC 513 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~---~~~ 513 (609)
...||+++++|++.+.+++......... .+.+.+.+..++ ..++++..++++||++.+.+... ...
T Consensus 7 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 86 (170)
T 2ge3_A 7 TVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHC 86 (170)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTE
T ss_pred cEEEeeCCHHHHHHHHHHHHhhhhcccccccCCCCCHHHHHHHHHhhccCCceEEEEEECCEEEEEEEEecccccCCCce
Confidence 3579999999999999998775543321 233444333322 45778888999999999985432 245
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
+++ .++|+|+|||||+|++|++.++++|++.|++++.+.+ .++.+||+|+||+..+...... ..+....+.
T Consensus 87 ~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~g~~~d~ 161 (170)
T 2ge3_A 87 GTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAV----SIDGHYIDS 161 (170)
T ss_dssp EEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEE----ESSSCEEEE
T ss_pred EEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHCCCEEEeEecceE----eeCCEEeee
Confidence 677 8999999999999999999999999999999999988 3799999999999887653110 012222456
Q ss_pred eEEeecCC
Q 007275 590 YYMKKLLP 597 (609)
Q Consensus 590 i~mkkll~ 597 (609)
++|.++++
T Consensus 162 ~~~~~~~~ 169 (170)
T 2ge3_A 162 LNMAIIFG 169 (170)
T ss_dssp EEEEEECC
T ss_pred eeEeehhc
Confidence 77777664
|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-14 Score=131.08 Aligned_cols=127 Identities=22% Similarity=0.236 Sum_probs=99.0
Q ss_pred cccccccccCCcCCHHHHHHHHhhhHhhcc---CccCCHHHHHhhc------CeEEEEEECCEEEEEEEEEEec----CC
Q 007275 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KE 511 (609)
Q Consensus 445 ~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~i------~~~~V~~~dg~IVG~~~l~~~~----~~ 511 (609)
..|.+.||+++++|++.+.+++........ ..+++.+.+..++ ..+++++.++++||++.+.+.. ..
T Consensus 7 ~~M~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 86 (166)
T 2fe7_A 7 GHMTLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGR 86 (166)
T ss_dssp ----CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTE
T ss_pred ecCceEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEeCCeEEEEEEEEeccCCcccC
Confidence 346678999999999999999887433221 2345667666654 3478888999999999987532 22
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
..++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+++||+..+.
T Consensus 87 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 150 (166)
T 2fe7_A 87 NGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDE 150 (166)
T ss_dssp EEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECTT
T ss_pred CcEEEEEEEECccccCccHHHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHcCCeEccc
Confidence 3478999999999999999999999999999999999999987 37899999999998764
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=131.87 Aligned_cols=123 Identities=15% Similarity=0.189 Sum_probs=93.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHh--hccC-ccCCHHH----HHhh----cCeEEEEEECCEEEEEEEEEEecC-----CC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE--SGAL-VRRTDEE----LLKA----LDSFYVVEREGQIIACAALFPFFK-----EK 512 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~--~~~~-~~~~~e~----l~~~----i~~~~V~~~dg~IVG~~~l~~~~~-----~~ 512 (609)
..||+++++|++.+.+++..... .... ..+..+. +... -..+++++.++++||++.+..... ..
T Consensus 5 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 84 (153)
T 1z4e_A 5 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 84 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEECCHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHcCCCeeEEEEecCCcEEEEEEEEecCCcccCCcc
Confidence 57999999999999999875211 1111 1111122 2111 134678888999999998864322 23
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
.++|..++|+|+|||||+|++||++++++|++.|+..+.+.+ ..+.+||+|+||+..+.
T Consensus 85 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~~ 147 (153)
T 1z4e_A 85 RATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE 147 (153)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEE
T ss_pred ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCCceece
Confidence 578999999999999999999999999999999999999988 37899999999998754
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-14 Score=130.26 Aligned_cols=125 Identities=19% Similarity=0.192 Sum_probs=101.1
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhc-------c---CccCCHHHHHhhc----CeEEEEEECC-EEEEEEEEEEecC----
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESG-------A---LVRRTDEELLKAL----DSFYVVEREG-QIIACAALFPFFK---- 510 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~-------~---~~~~~~e~l~~~i----~~~~V~~~dg-~IVG~~~l~~~~~---- 510 (609)
.||+++.+|++.+.+++....... + ...+..+.+...+ ..+++++.++ ++||++.+.....
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~~~~~~~~~~ 81 (164)
T 4e0a_A 2 IIREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHLVQTPLLP 81 (164)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEEEEEEECCCS
T ss_pred EEEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECCCCcEEEEEEEEecCCCCCc
Confidence 589999999999999998754321 1 2345566665554 3567777777 9999999985432
Q ss_pred ----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecc
Q 007275 511 ----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 511 ----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~l 574 (609)
...++|..++|+|+|||+|+|++||+.+++++++.|++.+.+.+ .++.+||+++||+..+....
T Consensus 82 ~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~ 153 (164)
T 4e0a_A 82 TMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTME 153 (164)
T ss_dssp SBCCEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred cccCCcEEEEEEEEECHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceecc
Confidence 23589999999999999999999999999999999999999987 37899999999999887643
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=133.77 Aligned_cols=122 Identities=18% Similarity=0.112 Sum_probs=97.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecC-------CCeEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK-------EKCGEVA 517 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~-------~~~~eI~ 517 (609)
..||+++.+|++.+.+++...+.. ......+.+...+ ..+++++.++++||++.+..... ...++|.
T Consensus 22 ~~ir~~~~~D~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 99 (166)
T 4evy_A 22 MNIKPASEASLKDWLELRNKLWSD--SEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRFEYVNGTETSPVGFLE 99 (166)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSCC--CHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHhcC--CchHHHHHHHHHhcCCCceEEEEEECCeEEEEEEEEeecccccCCCCCCeEEEE
Confidence 469999999999999998765333 1111123343333 34788889999999999854321 5678999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++||+.++++|++.|++.+.+.+ .++.+||+++||+..+..
T Consensus 100 ~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 158 (166)
T 4evy_A 100 GIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQETEKV 158 (166)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCCEecceE
Confidence 9999999999999999999999999999999999988 368999999999998654
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-14 Score=132.54 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=105.2
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhcc---C-ccCCHHHHHhhc-------CeEEEE-EECCEEEEEEEEEEecC----
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK---- 510 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~---~-~~~~~e~l~~~i-------~~~~V~-~~dg~IVG~~~l~~~~~---- 510 (609)
|...||+++++|++.+.+++........ . .+.+.+.+..++ ..++++ +.++++||++.+.+...
T Consensus 1 M~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~ 80 (172)
T 2j8m_A 1 MSASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGF 80 (172)
T ss_dssp -CCEEEECCGGGHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGG
T ss_pred CceEEEECCHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHhhcccCceEEEEEcCCCeEEEEEEEecccCCccc
Confidence 3457999999999999999887554322 1 233444433222 346666 56899999999875422
Q ss_pred CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCC
Q 007275 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSR 586 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~ 586 (609)
....++ .++|+|+|||||+|++||+.++++|++.|++++.+.+ .++.+||+|+||+..+...... ..+...
T Consensus 81 ~~~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~ 155 (172)
T 2j8m_A 81 RGTVEH-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVG----QKFGRW 155 (172)
T ss_dssp TTEEEE-EEEECTTCTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEE
T ss_pred CceEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCCEEEeeccccc----eecCEE
Confidence 123444 7999999999999999999999999999999999987 3789999999999987642110 011112
Q ss_pred CceeEEeecCCC
Q 007275 587 NSKYYMKKLLPD 598 (609)
Q Consensus 587 ~s~i~mkkll~~ 598 (609)
.+.++|.+++..
T Consensus 156 ~d~~~m~~~~~~ 167 (172)
T 2j8m_A 156 LDLTFMQLNLDP 167 (172)
T ss_dssp EEEEEEEEESCT
T ss_pred eEHHHHHhhhcc
Confidence 356788877754
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-14 Score=131.97 Aligned_cols=140 Identities=17% Similarity=0.163 Sum_probs=110.4
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~ 525 (609)
..||+++++|++.+.++..... ..+++.+.+...+ ..+|+++.++++||++.+.+. .+.++|..++|+|+|
T Consensus 2 i~ir~~~~~D~~~i~~l~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~~~v~p~~ 75 (160)
T 2cnt_A 2 NTISILSTTDLPAAWQIEQRAH----AFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVV--LDEATLFNIAVDPDF 75 (160)
T ss_dssp EEEEECCGGGHHHHHHHHHHHC----SSCCCHHHHHHSCSTTBCCEEEEETTEEEEEEEEEEE--TTEEEEEEEEECGGG
T ss_pred eEEEeCCHHHHHHHHHHHHhhc----ccCCCHHHHHHHhccCccEEEEEECCeEEEEEEEEec--CCceEEEEEEECHHH
Confidence 3699999999999999976543 3456777777666 356788899999999999854 357899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+....... ......+.++|.++.+.
T Consensus 76 rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~----~~~~~~d~~~~~~~~~~ 148 (160)
T 2cnt_A 76 QRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYP----TAQGHEDAIIMALPISM 148 (160)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEE----ETTEEEEEEEEEEECCC
T ss_pred cCCCHHHHHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEEEEEeeeee----cCCCCccEEEEEeechh
Confidence 99999999999999999999999999987 37899999999999876531100 00112456777777654
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=132.64 Aligned_cols=123 Identities=14% Similarity=0.165 Sum_probs=97.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHh-hcCeEEEEEECCEEEEEEEEEEec-CCCeEEEEEEEEcccCc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 526 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~-~i~~~~V~~~dg~IVG~~~l~~~~-~~~~~eI~~iaV~p~~R 526 (609)
..||+++++|++.+.++++...............+.. ....+++++.++++||++.+.... ....++|..++|+|+||
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~r 81 (157)
T 1mk4_A 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEECCHhHHHHHHHHHHHhccCcchhhHHHHHHHhccCCcEEEEEECCeEEEEEEEecCCCCCCeEEEEEEEECHHHc
Confidence 4689999999999999987644432221111122212 224578888899999999887533 35789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
|+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+.
T Consensus 82 g~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 130 (157)
T 1mk4_A 82 KMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKG 130 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcCC
Confidence 9999999999999999999999999988 37899999999999874
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-14 Score=130.21 Aligned_cols=124 Identities=19% Similarity=0.204 Sum_probs=100.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccC-------------CHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCC
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR-------------TDEELLKAL--DSFYVVEREGQIIACAALFPFFKE 511 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~-------------~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~ 511 (609)
|...||+++++|++.+.++........+.... +.+.+...+ ..+++++.++++||++.+.+.. .
T Consensus 4 m~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-~ 82 (163)
T 3fnc_A 4 MDFHIRKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQADKVIGFANFIELE-K 82 (163)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHSSHHHHHHHHHHSCEEEEEETTEEEEEEEEEEEE-T
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHhcCCHHHHHHhccCCEEEEEEECCEEEEEEEEEeCC-C
Confidence 55689999999999999998775544433222 233333332 4588899999999999998654 7
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
..++|..++|+|+|||+|+|++|++.++++++ |+..+.+.+ .++.+||+|+||+..+...
T Consensus 83 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~--~~~~i~l~v~~~n~~a~~~y~k~Gf~~~~~~~ 146 (163)
T 3fnc_A 83 GKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFVNVEKGNETAIHFYKAKGFVQVEEFT 146 (163)
T ss_dssp TEEEEEEEEECGGGCSSSHHHHHHHHHHHHTT--CCSSEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CcEEEEEEEECHHHhCCCHHHHHHHHHHHHhc--cCCEEEEEEeCCCHHHHHHHHHcCCEEEEEEE
Confidence 78999999999999999999999999999997 888888887 4789999999999988754
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.7e-14 Score=131.84 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=101.5
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCcc---CCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVR---RTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~---~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p 523 (609)
.||+++++|.+.+.++..-. ...+... ...+.+...+ ..+++..+++++||++.+.+......++|..++|+|
T Consensus 2 ~ir~~~~~D~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~l~V~p 80 (180)
T 1n71_A 2 IISEFDRNNPVLKDQLSDLL-RLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVES 80 (180)
T ss_dssp EEEECCTTCHHHHHHHHHHH-HHHCTTTSSSTHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECT
T ss_pred EEEECCccCHHHHHHHHHHH-HHhcccccchhHHHHHHHHhCCCcEEEEEecCCeEEEEEEEeccCCCceEEEEEEEEcc
Confidence 58999999996665554322 2222222 2244454444 234344457999999999866567789999999999
Q ss_pred cCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-----------------------------HHHHHHHHCCCeEeeeecc
Q 007275 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-----------------------------RTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 524 ~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-----------------------------~a~~fYek~GF~~~~~~~l 574 (609)
+|||+|+|++||+.+++++++.|++.+.+.+. ++.+||+|+||+.++....
T Consensus 81 ~~rg~GiG~~ll~~~~~~~~~~g~~~i~l~~~~~n~~s~~~~~~~~~~~~~~~~~v~n~~~~a~~~y~k~GF~~~~~~~~ 160 (180)
T 1n71_A 81 SRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLPN 160 (180)
T ss_dssp TSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEEETT
T ss_pred ccccCCHHHHHHHHHHHHHHHCCCcEEEEEecCCcccccccccccccccchhhhhhcccchHHHHHHHHcCcEEEeeecc
Confidence 99999999999999999999999999999872 3689999999999887632
Q ss_pred hhHhhhhcccCCCceeEEeecCC
Q 007275 575 PEERRKRINLSRNSKYYMKKLLP 597 (609)
Q Consensus 575 p~~~~~~y~~~~~s~i~mkkll~ 597 (609)
. .......++|.|.+.
T Consensus 161 ~-------~~~~~~~~~m~k~l~ 176 (180)
T 1n71_A 161 A-------NGWDKPDIWMAKTII 176 (180)
T ss_dssp T-------TSTTCCEEEEEEECS
T ss_pred c-------CCCCCCcEEEEecCC
Confidence 1 112335566665553
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.58 E-value=6.3e-14 Score=130.92 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=97.3
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhcc----C---ccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEecC--
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGA----L---VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK-- 510 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~----~---~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~~-- 510 (609)
...||+++++|++.+.++......... . .+++.+....++ ..+++++.++++||++.+.....
T Consensus 4 ~l~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~ 83 (172)
T 2i79_A 4 ELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKR 83 (172)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHTTCSSSSCCTTCCCCCHHHHHHHHHHHHHCSSCEEEEEEETTEEEEEEEEECCCSTT
T ss_pred eEEEEeCCHHHHHHHHHHHHHHhhcCcccccCCccccCCHHHHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEEecCCCc
Confidence 356999999999999999876543221 1 123555433332 35678888999999999884332
Q ss_pred -CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 511 -EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 -~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G-~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...+++ .++|+|+|||||+|++||+.++++|++.+ +++|.+.+ .+|++||+|+||+..+..
T Consensus 84 ~~~~~~~-~~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~A~~~yek~GF~~~g~~ 150 (172)
T 2i79_A 84 VRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQ 150 (172)
T ss_dssp TTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeEE
Confidence 245666 69999999999999999999999999988 99999988 379999999999998765
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-13 Score=128.01 Aligned_cols=124 Identities=21% Similarity=0.280 Sum_probs=100.9
Q ss_pred cccccCCcCC----HHHHHHHHhhhHhhc----cCccCCHHHHHhhc-----------CeEEEEEECCEEEEEEEEEEec
Q 007275 449 EGTRTAKVTD----LSGIKQIIQPLVESG----ALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 449 ~~IR~a~~~D----~~~I~~L~~~~~~~~----~~~~~~~e~l~~~i-----------~~~~V~~~dg~IVG~~~l~~~~ 509 (609)
..||+++++| ++.+.+++....... +..+++.+....++ ..+++++.+|++||++.+.+..
T Consensus 4 ~~ir~~~~~D~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~ 83 (177)
T 1ghe_A 4 AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQ 83 (177)
T ss_dssp CEEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEEeCChHHhHhHHHHHHHHHHHHhhccCcccccCCCCHHHHHHHHHHHHHhhcCCceEEEEEecCCEEEEEEEEEecc
Confidence 4699999999 899999988765542 33445554433222 3478888999999999998643
Q ss_pred C---CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHHHHCCCeEeeee
Q 007275 510 K---EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 ~---~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fYek~GF~~~~~~ 572 (609)
. ...++|..++|+|+|||+|+|++|++.++++|++.|++.+.+.+ +.+.+||+++||+..+..
T Consensus 84 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~Gf~~~~~~ 152 (177)
T 1ghe_A 84 KPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGEL 152 (177)
T ss_dssp STTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEEE
T ss_pred CCCCcceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHcCCEEcccc
Confidence 2 35799999999999999999999999999999999999999988 369999999999998764
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=133.23 Aligned_cols=123 Identities=21% Similarity=0.315 Sum_probs=99.9
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---------CeEEEEEECCEEEEEEEEEEec-----CCC
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF-----KEK 512 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---------~~~~V~~~dg~IVG~~~l~~~~-----~~~ 512 (609)
+.+.||+++.+|++.+.++++..... .+++.+.+...+ ..+++++.++++||++.+.... ...
T Consensus 19 ~~~~ir~~~~~D~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 95 (161)
T 3i3g_A 19 VDLELRVLEESDLSSHLELLGHLTEA---PPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRA 95 (161)
T ss_dssp CCEEEEECCGGGHHHHHHHHTTTSCC---CCCCHHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGCC
T ss_pred ccEEEEECcHhhHHHHHHHHHHhccC---CCCCHHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCcc
Confidence 44679999999999999997664432 244555544432 2456667799999999998532 257
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
.++|..++|+|+|||+|+|++|++.++++|++.|+..+.+.+. .+.+||+++||+.++..
T Consensus 96 ~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 156 (161)
T 3i3g_A 96 VGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRAHERQ 156 (161)
T ss_dssp EEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEECTTTHHHHHHTTCEEEEEE
T ss_pred EEEEEEEEEcHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEecccchhHHHhcCCeecCce
Confidence 8899999999999999999999999999999999999999884 56899999999998764
|
| >3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=136.59 Aligned_cols=127 Identities=14% Similarity=0.109 Sum_probs=102.9
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccC-ccCCHHHHHhhc----------CeEEEEEECCEEEEEEEEEEecC----
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL----------DSFYVVEREGQIIACAALFPFFK---- 510 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i----------~~~~V~~~dg~IVG~~~l~~~~~---- 510 (609)
.|.+.||+++.+|++.+.+++.......+. .+++.+.+..++ ..+++++.++++||++.+.+...
T Consensus 21 ~M~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~ 100 (183)
T 3i9s_A 21 GMSVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIMFPAPKL 100 (183)
T ss_dssp --CCEEEECCGGGGGGGHHHHHHHHHHHHGGGCCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEEEEESCCGGG
T ss_pred CCeeEEEEcCHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHhhhccCCCceEEEEEECCEEEEEEEEEEecCCCCC
Confidence 466789999999999999998876554443 335555554433 23788889999999999985432
Q ss_pred CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...++|..++|+|+|||+|+|++||+.++++|++.|++.+.+.+ .++.+||+++||+..+..
T Consensus 101 ~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (183)
T 3i9s_A 101 SGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREK 166 (183)
T ss_dssp CEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred CCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHHcCCceeccc
Confidence 35789999999999999999999999999999999999999988 378999999999998643
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-14 Score=128.78 Aligned_cols=127 Identities=16% Similarity=0.143 Sum_probs=97.2
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccCccCC----HHHHHhhc-----CeEEEEEECCEEEEEEEEEEecC----CC
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT----DEELLKAL-----DSFYVVEREGQIIACAALFPFFK----EK 512 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~----~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~~~----~~ 512 (609)
.|.+.||+++++|++.+.++...........+.+ .+.+...+ ..+++++.++++||++.+.+... ..
T Consensus 4 ~~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 83 (157)
T 3dsb_A 4 EELIEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGN 83 (157)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCGGGCEEEEEEETTEEEEEEEEEEEEETTTTEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHhCcCcceEEEEEeCCcEEEEEEEEEeccccCCCc
Confidence 3556899999999999999877654321112222 22222211 45788888999999999974322 23
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G-~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|..++|+|+|||+|+|++||+.+++++++.| ++.+.+.+ .++.+||+++||+..+..
T Consensus 84 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 148 (157)
T 3dsb_A 84 FLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYN 148 (157)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTTCEECSEE
T ss_pred eEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCCCEEecce
Confidence 4679999999999999999999999999999999 99988887 379999999999987655
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.5e-14 Score=130.51 Aligned_cols=140 Identities=21% Similarity=0.247 Sum_probs=105.3
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccCccCCHHH-------------HHhhc--CeEEEEEECCEEEEEEEEEEecCCC
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------------LLKAL--DSFYVVEREGQIIACAALFPFFKEK 512 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~-------------l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~ 512 (609)
...||+++.+|++.+.+++.......+....+.+. +...+ ..+++++.++++||++.+. .
T Consensus 7 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~-----~ 81 (172)
T 2fiw_A 7 TPALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLK-----G 81 (172)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEE-----T
T ss_pred CcEEEECchhhHHHHHHHHHHHHHHhccccCCHHHHHHHHhhccCHHHHHHHhcCCeEEEEEECCEEEEEEEEe-----c
Confidence 35799999999999999988755433332233222 22221 4678888999999999987 3
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeE
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 591 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~ 591 (609)
..+|..++|+|+|||+|+|++|++.+++++++.|++.+.+.++ ++.+||+++||+..+....+ ++......+.
T Consensus 82 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~n~~a~~~y~k~GF~~~~~~~~~------~~g~~~~~~~ 155 (172)
T 2fiw_A 82 PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVS------INGEWLANTT 155 (172)
T ss_dssp TTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEEEEE------ETTEEEEEEE
T ss_pred CcEEEEEEECccccCcCHHHHHHHHHHHHHHhcCCcEEEEEeCHHHHHHHHHcCCEEecceeEe------ECCEEeeeEE
Confidence 4688899999999999999999999999999999999999884 78999999999998765332 1112234566
Q ss_pred EeecCCC
Q 007275 592 MKKLLPD 598 (609)
Q Consensus 592 mkkll~~ 598 (609)
|.+.++.
T Consensus 156 ~~~~l~~ 162 (172)
T 2fiw_A 156 MTKSLAD 162 (172)
T ss_dssp EEEEC--
T ss_pred EEEeccc
Confidence 7666643
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.9e-14 Score=130.36 Aligned_cols=124 Identities=18% Similarity=0.176 Sum_probs=98.5
Q ss_pred ccccccc-CCcCCHHHHHHHHhhhHhhccCcc---CCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecC-CCeE
Q 007275 447 LYEGTRT-AKVTDLSGIKQIIQPLVESGALVR---RTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK-EKCG 514 (609)
Q Consensus 447 ~~~~IR~-a~~~D~~~I~~L~~~~~~~~~~~~---~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~-~~~~ 514 (609)
+...||+ ++.+|++.+.+++... ..+... +..+.+..++ ..+++++.++++||++.+.+... ...+
T Consensus 18 ~~~~ir~~~~~~D~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 95 (177)
T 2r7h_A 18 GAVAFRRQVLPQDALLVRRVVEST--GFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYACYGPTPATEGTY 95 (177)
T ss_dssp -CEEEECSCCTTHHHHHHHHHHHT--SCSCHHHHHHHHHHHHHHHTC--CCSCEEEEEEETTEEEEEEEEEECTTSSSEE
T ss_pred cceEEccCCCHHHHHHHHHHHHhh--CccCcchhhhHHHHHHHHHhhccCCCeEEEEEEECCeEEEEEEEEeccCCCCeE
Confidence 3367999 9999999999998763 111111 2233344433 25778889999999999986432 4678
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe------HHHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t------~~a~~fYek~GF~~~~~~ 572 (609)
+|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 96 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~ 159 (177)
T 2r7h_A 96 DLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAVL 159 (177)
T ss_dssp EEEEEEECTTTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEECHHHhCCCHHHHHHHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHcCCEecccc
Confidence 9999999999999999999999999999999999999977 268999999999998765
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-14 Score=129.96 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=90.2
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEec----CCCeE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF----KEKCG 514 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~----~~~~~ 514 (609)
+...||+++++|++.+.+++... . .+++.+.+...+ ..+++++.++++||++.+.+.. ....+
T Consensus 7 ~~~~ir~~~~~D~~~i~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 81 (150)
T 3t9y_A 7 ITRLFNNSDFEKLNQLCKLYDDL---G--YPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYM 81 (150)
T ss_dssp EEEECCGGGGGCHHHHHHHHHHH---T--CCCCHHHHHHHHHHHHTSTTEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred hHHHHHhcCHHHHHHHHHHHHHh---C--CCCCHHHHHHHHHHhhcCCceEEEEEEECCEEEEEEEEEEeccccccCCEE
Confidence 44679999999999999997654 2 234444443322 3568888999999999988643 34678
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH------HHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~------~a~~fYek~GF~~~~~~ 572 (609)
+|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+. ++.+||+++||+..+..
T Consensus 82 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~~~~~~ 145 (150)
T 3t9y_A 82 RILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSG 145 (150)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSCEEECCCCCC------------CCCCCCCC
T ss_pred EEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCEEecce
Confidence 99999999999999999999999999999999999999873 58999999999987654
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=9.6e-14 Score=130.04 Aligned_cols=145 Identities=21% Similarity=0.162 Sum_probs=103.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc---C-ccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecC----CCe
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK----EKC 513 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~---~-~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~----~~~ 513 (609)
..||+++++|++.+.+++........ . .+.+.+.+..++ ..+++++.++++||++.+.+... ...
T Consensus 5 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~ 84 (175)
T 1yr0_A 5 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 84 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEecCCHhHHHHHHHHHHHHHhcCcccccccCCCHHHHHHHHHhhcccCceEEEEEeCCcEEEEEEEecccCccccCce
Confidence 56999999999999999877544322 1 234444433222 34677778999999999875422 123
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
.++ .++|+|+|||||+|++|++.++++|++.|++.+.+.+ .++.+||+|+||+..+...... ..+....+.
T Consensus 85 ~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~d~ 159 (175)
T 1yr0_A 85 REH-SVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRFSEVG----TKFGRWLDL 159 (175)
T ss_dssp EEE-EEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEE
T ss_pred EEE-EEEECccccCCCHHHHHHHHHHHHHHhCCccEEEEEecCCCHHHHHHHHHCCCEEEEEccccc----ccCCEEEEH
Confidence 344 7999999999999999999999999999999999877 3789999999999987642110 011122356
Q ss_pred eEEeecCCC
Q 007275 590 YYMKKLLPD 598 (609)
Q Consensus 590 i~mkkll~~ 598 (609)
++|.++++.
T Consensus 160 ~~~~~~~~~ 168 (175)
T 1yr0_A 160 TCMELKLGE 168 (175)
T ss_dssp EEEEEEC--
T ss_pred HHHHHHHhc
Confidence 677766653
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=129.56 Aligned_cols=127 Identities=21% Similarity=0.243 Sum_probs=99.4
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc-cCccCC-HHH----HHhhc----CeEEEEEECCEEEEEEEEEEec--------C
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRT-DEE----LLKAL----DSFYVVEREGQIIACAALFPFF--------K 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~-~~~~~~-~e~----l~~~i----~~~~V~~~dg~IVG~~~l~~~~--------~ 510 (609)
+.||+++.+|++.+.+++....... +..... .+. +...+ ..++++++++++||++.+.... .
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 81 (157)
T 3mgd_A 2 MNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDFPPTYTNKT 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEECCCBTTBTT
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHcCCCCcchhhHHHHHHHHHHhcCCceEEEEEEECCEEEEEEEEEeecCCCCccCcC
Confidence 4699999999999999988754433 221111 222 22222 3568888999999999887531 2
Q ss_pred CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeecch
Q 007275 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp 575 (609)
...++|..++|+|+|||+|+|++||+.+++++++.|++.+.+.+ ..+.+||+|+||+.++....+
T Consensus 82 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~~~~ 147 (157)
T 3mgd_A 82 GRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEWLEL 147 (157)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEEECCCTTHHHHHHHHTCCCCTTCCCC
T ss_pred CcEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCeecceEEEE
Confidence 45788999999999999999999999999999999999999988 478999999999998766433
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.5e-14 Score=129.20 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=99.7
Q ss_pred cccc-cCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccC
Q 007275 449 EGTR-TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (609)
Q Consensus 449 ~~IR-~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~ 525 (609)
+.+| +++++|++.+.++++.. ..+..+.+.+.+...+ ..++++..++++||++.+.+ .....++|..++|+|+|
T Consensus 5 ~~i~~~~~~~D~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 81 (142)
T 2ozh_A 5 VHVSTDNSLLDIGLIHRTLSQD--TDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVIS-DYATFAYLGDVFVLPEH 81 (142)
T ss_dssp CEEECCGGGCCHHHHHHHHHHH--CSTTTTCCHHHHHHHHHTSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGG
T ss_pred EEecCCCchhhHHHHHHHHhhc--cccCCCCCHHHHHHHhccCcEEEEEECCEEEEEEEEEe-cCCCcEEEEEEEECHHH
Confidence 4566 68999999999998761 2233345556665554 46788888999999999985 34567899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
||+|+|++|++.+++++++.|++.+.+.+..+.+||+|+||+..+..
T Consensus 82 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~a~~~y~k~GF~~~~~~ 128 (142)
T 2ozh_A 82 RGRGYSKALMDAVMAHPDLQGLRRFSLATSDAHGLYARYGFTPPLFP 128 (142)
T ss_dssp TTSSHHHHHHHHHHHCGGGSSCSEEECCCSSCHHHHHTTTCCSCSSG
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEEecchHHHHHHHCCCEEcCCc
Confidence 99999999999999999999999999988888999999999987653
|
| >4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-13 Score=131.98 Aligned_cols=127 Identities=18% Similarity=0.211 Sum_probs=98.0
Q ss_pred cccccCCcCCHHHHHHHHhhhHhh-------ccCccCCHHH----HHhhc--CeEEEEEE--CCEEEEEEEEEEec----
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVES-------GALVRRTDEE----LLKAL--DSFYVVER--EGQIIACAALFPFF---- 509 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~-------~~~~~~~~e~----l~~~i--~~~~V~~~--dg~IVG~~~l~~~~---- 509 (609)
+.||+++++|++.+.+++...... ....+...+. +...+ ..++++.+ +|++||++.+.+..
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~~~~~~ 86 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPIQPGDP 86 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEECTTHH
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeeccCccch
Confidence 579999999999999998765211 1111111122 22222 45777877 89999999886532
Q ss_pred ------------------------------------CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q 007275 510 ------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 553 (609)
Q Consensus 510 ------------------------------------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~ 553 (609)
.+...+|..++|+|+|||+|+|++|++.++++|++.|+..+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~~~ 166 (217)
T 4fd4_A 87 DAMVEEAATTETKKWGDILKLLALLERTADVCGRYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISGD 166 (217)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCHHHHHTCSCEEEEEEEEECTTSCSSCHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhhhhhcChhHHHHHHHHHHHHhcccHHHHcCCCceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 24567899999999999999999999999999999999999987
Q ss_pred e--HHHHHHHHHCCCeEeeeecch
Q 007275 554 T--TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 554 t--~~a~~fYek~GF~~~~~~~lp 575 (609)
+ ..+.+||+|+||+..+...+.
T Consensus 167 ~~n~~a~~~Y~k~GF~~~~~~~~~ 190 (217)
T 4fd4_A 167 FTSVFSVKLAEKLGMECISQLALG 190 (217)
T ss_dssp ECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred eCCHHHHHHHHHCCCeEEEeEeHH
Confidence 6 478999999999999876544
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-13 Score=132.74 Aligned_cols=125 Identities=17% Similarity=0.134 Sum_probs=103.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc-cCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEec-------------
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~------------- 509 (609)
.+.||+++.+|++.+.++........ ...+++.+.+...+ ..++++++++++||++.+....
T Consensus 34 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 113 (207)
T 1kux_A 34 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 113 (207)
T ss_dssp SCEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred CeEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhCCCeEEEEEECCEEEEEEEEEeecccccccccccccC
Confidence 35799999999999999987644331 12356666666554 4588889999999999887543
Q ss_pred -CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 510 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 -~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
....++|..++|+|+|||+|+|++|++++++++++. |++.+.+.+ ..+.+||+++||+..+..
T Consensus 114 ~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~ 179 (207)
T 1kux_A 114 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPC 179 (207)
T ss_dssp TTCCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECGGGHHHHHTTTCEEEEEC
T ss_pred CCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEeecHHHHHHHHHCCCEECCcc
Confidence 246789999999999999999999999999999998 999998877 478999999999999854
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.8e-14 Score=124.63 Aligned_cols=117 Identities=20% Similarity=0.261 Sum_probs=94.8
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
..||+++++|++.+.++...... .++..+.+...+ ..++++..++++||++.+.+. ..+..++..++|+|+||
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~r 77 (143)
T 3bln_A 3 KNVTKASIDDLDSIVHIDIDVIG----NDSRRNYIKHSIDEGRCVIVKEDNSISGFLTYDTN-FFDCTFLSLIIVSPTKR 77 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHS----SSTTHHHHHHHHHTTCEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEECTTCC
T ss_pred eeEEECCHhhHHHHHHHHHHccC----chhHHHHHHHHhCCCeEEEEEeCCeEEEEEEEEec-CCCceEEEEEEECHHHc
Confidence 46999999999999999765443 345555555444 567888899999999999854 35678899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
|+|+|++|++.+++++++.+ +.+.+ .++.+||+++||+..+...
T Consensus 78 g~Gig~~ll~~~~~~~~~~~---i~~~~~~~n~~a~~~y~k~Gf~~~~~~~ 125 (143)
T 3bln_A 78 RRGYASSLLSYMLSHSPTQK---IFSSTNESNESMQKVFNANGFIRSGIVE 125 (143)
T ss_dssp SSCHHHHHHHHHHHHCSSSE---EEEEEETTCHHHHHHHHHTTCEEEEEEC
T ss_pred CCChHHHHHHHHHHHHhhCC---eEEEEcccCHHHHHHHHHCCCeEeeEEe
Confidence 99999999999999998776 44444 3789999999999987763
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-13 Score=126.89 Aligned_cols=142 Identities=18% Similarity=0.225 Sum_probs=106.7
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
|...||+++++|++.+..+.. ..+.+.+..++ ..+++++.++++||++.+.+ .....++|..++|+|+
T Consensus 3 M~~~ir~~~~~D~~~i~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~ 72 (157)
T 1y9k_A 3 MSVVIERIPKEAIPKSLLLLA---------DPSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEH 72 (157)
T ss_dssp CCCEEEEECGGGCCHHHHHHH---------CCCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGG
T ss_pred ceEEEEECCHhHhhhhhcccc---------CCCHHHHHHHhccCcEEEEEECCEEEEEEEEEc-CCCCEEEEEEEEECHH
Confidence 567899999999999854421 22445555444 56788888999999999974 3567899999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhh---hhccc--CCCceeEEeec
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERR---KRINL--SRNSKYYMKKL 595 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~---~~y~~--~~~s~i~mkkl 595 (609)
|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+....-.... ..+.. ...+.++|.|.
T Consensus 73 ~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~m~k~ 152 (157)
T 1y9k_A 73 LQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSIDFDYFSKHYEEEIIENGIVCRDMIRLAME 152 (157)
T ss_dssp GCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEETTHHHHHCSSCEEETTEEECSEEEEEEE
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEeccccccccCCCchHHHHcCCchHHHhhHHHH
Confidence 999999999999999999999999999988 2589999999999988653221110 01111 13467777777
Q ss_pred CCC
Q 007275 596 LPD 598 (609)
Q Consensus 596 l~~ 598 (609)
+++
T Consensus 153 l~~ 155 (157)
T 1y9k_A 153 LNK 155 (157)
T ss_dssp CC-
T ss_pred hcc
Confidence 653
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=133.80 Aligned_cols=127 Identities=20% Similarity=0.326 Sum_probs=96.9
Q ss_pred cccccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh----c-----CeEEEEEECCEEEEEEEEEEec----CC
Q 007275 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----L-----DSFYVVEREGQIIACAALFPFF----KE 511 (609)
Q Consensus 445 ~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~----i-----~~~~V~~~dg~IVG~~~l~~~~----~~ 511 (609)
..|.+.||+++.+|++.+.+++........ .+++.+..... + ..+|+++.++++||++.+.... ..
T Consensus 20 ~gm~~~ir~~~~~D~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~ 98 (176)
T 3fyn_A 20 QGLSPQVRTAHIGDVPVLVRLMSEFYQEAG-FALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYGG 98 (176)
T ss_dssp GSSGGGEEECCGGGHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHCGGGEEEEEEEETTEEEEEEEEEEEEETTTTE
T ss_pred ecceEEEEECCHHHHHHHHHHHHHHHHhcC-CCcccHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEEEEeccccccCC
Confidence 457778999999999999999887554321 23333332222 1 3578889999999999997532 23
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|+|++||+.++++|++.|++.+.+.+ .++.+||+++||+..+..
T Consensus 99 ~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 163 (176)
T 3fyn_A 99 LRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGFEESGRM 163 (176)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEECCCC--------HHHHTTCCCCCCC
T ss_pred ceEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCeeccce
Confidence 5689999999999999999999999999999999999999987 378999999999986543
|
| >2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=9.3e-14 Score=126.19 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=99.0
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH-h--hcCeEEEEEECCEEEEEEEEEEecC-----CCeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-K--ALDSFYVVEREGQIIACAALFPFFK-----EKCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~-~--~i~~~~V~~~dg~IVG~~~l~~~~~-----~~~~eI~~ia 520 (609)
+.||+++.+|+..|.+..... .... ....+. . ....+++++.++++||++.+.+... ...++|..++
T Consensus 2 ~~ir~~~~~D~~~l~~~~~~~---~~~~--~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~ 76 (146)
T 2jdc_A 2 IEVKPINAEDTYELRHRILRP---NQPI--EACMFESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMA 76 (146)
T ss_dssp CEEEEECGGGGHHHHHHHTCT---TSCG--GGGSCGGGGSTTCEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHhccc---CCCc--chhhhhcccCCceEEEEEecCCEEEEEEEEecccccccCCCceEEEEEEE
Confidence 469999999988887643110 0000 000111 1 2245788889999999999986432 2378999999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+..... ......++|.|-|
T Consensus 77 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~GF~~~~~~~~~--------~~~~~~~~m~k~l 145 (146)
T 2jdc_A 77 TLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSEQGEVFDT--------PPVGPHILMYKRI 145 (146)
T ss_dssp ECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEEEEC--------TTSCEEEEEEEEC
T ss_pred ECHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEccccHHHHHHHcCCEEecccccC--------CCCCCeEEEEEec
Confidence 9999999999999999999999999999999988 478999999999998765321 1111567776654
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-13 Score=131.55 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=105.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc---C-ccCCHHHHHhhc-------CeEEEE-EECCEEEEEEEEEEecC----CC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----EK 512 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~---~-~~~~~e~l~~~i-------~~~~V~-~~dg~IVG~~~l~~~~~----~~ 512 (609)
..||+++++|++.+.+++++.....+ . .+++.+.+..++ ..++++ +.++++||++.+..... ..
T Consensus 11 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~iiG~~~~~~~~~~~~~~~ 90 (182)
T 2jlm_A 11 RFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKY 90 (182)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHCSSSCCSSCCCHHHHHHHHHHHHHTTCCEEEEEETTSCEEEEEEEEESSSSGGGTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhcceeeccCCCCCHHHHHHHHHhccccCceEEEEEccCCcEEEEEEecccCCcccccc
Confidence 46999999999999999887544322 1 234554433322 346666 66899999999875321 23
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCc
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 588 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s 588 (609)
.+++ .++|+|+|||||+|++||+.++++|++.|+++|.+.+ .+|++||+|+||+..+...-.. ..+....+
T Consensus 91 ~~e~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~GF~~~g~~~~~~----~~~g~~~d 165 (182)
T 2jlm_A 91 TVEH-SVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAG----FKFGRWLD 165 (182)
T ss_dssp EEEE-EEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEE
T ss_pred eeEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCceEEEEEEeCCCHHHHHHHHHCCCcEEEEeeeee----eeCCEEEE
Confidence 4455 7999999999999999999999999999999999988 3799999999999988642110 01111235
Q ss_pred eeEEeecCCC
Q 007275 589 KYYMKKLLPD 598 (609)
Q Consensus 589 ~i~mkkll~~ 598 (609)
.++|.++++.
T Consensus 166 ~~~m~~~~~~ 175 (182)
T 2jlm_A 166 AAFYQLTLDT 175 (182)
T ss_dssp EEEEEEECSC
T ss_pred eeeehhhhcc
Confidence 6778777754
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.54 E-value=9e-14 Score=129.32 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=96.7
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhh---ccCccC-------CHHHHHhhc--CeEEEEE-ECCEEEEEEEEEEec-----
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVES---GALVRR-------TDEELLKAL--DSFYVVE-REGQIIACAALFPFF----- 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~---~~~~~~-------~~e~l~~~i--~~~~V~~-~dg~IVG~~~l~~~~----- 509 (609)
...||+++.+|++.+.+++...... .....| +.+.+...+ ..+|++. .++++||++.+.+..
T Consensus 13 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~ 92 (179)
T 2oh1_A 13 EFLVRFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDT 92 (179)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHCCCCTTHHHHHHTTCEEEEECTTCCEEEEEEEESSCCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCcchhhccccchHHHHHHhhccCcEEEEEecCCeEEEEEEEecCCCcchh
Confidence 4579999999999999998764221 001111 111222222 4577888 889999999987421
Q ss_pred -------CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 -------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 -------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
....++|..++|+|+|||+|+|++|++.++++|++.|++.+.+.+ .++.+||+|+||+..+..
T Consensus 93 ~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (179)
T 2oh1_A 93 DLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKK 166 (179)
T ss_dssp HHHGGGTTSCEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cccccCCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEeccc
Confidence 136789999999999999999999999999999999999999888 368999999999998875
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.3e-14 Score=126.85 Aligned_cols=132 Identities=19% Similarity=0.174 Sum_probs=101.7
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcH
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 530 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGi 530 (609)
+|+++++|++.+.+++.......+...+... .....+++++.++++||++.+.+. .+..+|..++|+|+|||+|+
T Consensus 6 ~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~~~v~~~~rg~Gi 80 (140)
T 1y9w_A 6 IENGTRIEGEYIKNKVIQYNMSILTDEVKQP---MEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESVRHDGY 80 (140)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHTSCGGGCCC---CEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGGTTTTH
T ss_pred eccCCHHHHHHHHHHHHHhhhccCchhhhhh---ccceEEEEECCCCeEEEEEEEEEe--cCEEEEEEEEEcHHHcCCCH
Confidence 6788999999999998875554443222111 011346666678999999999854 36789999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeec
Q 007275 531 GDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 531 G~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
|++|++.+++++++.|+..+.+.+ ..+.+||+++||+..+.... |.... +.++|.|.
T Consensus 81 g~~ll~~~~~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~~~-------~~~~~-~~~~m~k~ 139 (140)
T 1y9w_A 81 GSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED-------HPKGH-SQHFFEKR 139 (140)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS-------CSTTC-CEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEEcC-------ccCCc-eeEEEEec
Confidence 999999999999999999999988 37899999999999876531 22222 66777664
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.3e-14 Score=131.03 Aligned_cols=123 Identities=17% Similarity=0.195 Sum_probs=92.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc----cCccCCHHHHHhh-----cCeEEEEEECCEEEEEEEEEEec-----CCCeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG----ALVRRTDEELLKA-----LDSFYVVEREGQIIACAALFPFF-----KEKCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~----~~~~~~~e~l~~~-----i~~~~V~~~dg~IVG~~~l~~~~-----~~~~~ 514 (609)
..||+++++|++.|.+++....... .......+.+..+ ...+++++.++++||++.+.+.+ ....+
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 86 (159)
T 1wwz_A 7 EKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVG 86 (159)
T ss_dssp EECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEEE
T ss_pred hhhhhCCHhHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHhCCCCcEEEEEECCEEEEEEEEeccccccccCCceE
Confidence 4699999999999999976532211 1111111122211 24578888999999999886321 11347
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+|..++|+|+|||||+|++||+.+++++++.| +.+.+.+ .+|++||+|+||+..+..
T Consensus 87 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~~ 147 (159)
T 1wwz_A 87 AIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGKS 147 (159)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEcccc
Confidence 89999999999999999999999999999999 9998877 479999999999998765
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=8.7e-14 Score=128.28 Aligned_cols=125 Identities=16% Similarity=0.071 Sum_probs=98.9
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEe-------cCCCeEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF-------FKEKCGE 515 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~-------~~~~~~e 515 (609)
+.+.||+++.+|++.+.+++.......... ...+.+...+ ..+|+++.++++||++.+... .....++
T Consensus 19 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 97 (165)
T 1s3z_A 19 SHMDIRQMNKTHLEHWRGLRKQLWPGHPDD-AHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVF 97 (165)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHSTTSCHH-HHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEE
T ss_pred ceEEEEeCchhhHHHHHHHHHHHhccCCcH-HHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccccCCCcEE
Confidence 445799999999999999987654332211 0012233333 357888899999999999852 1246799
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 98 i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 158 (165)
T 1s3z_A 98 LEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERV 158 (165)
T ss_dssp EEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEChhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHcCCeEeeeE
Confidence 999999999999999999999999999999999999988 378999999999998754
|
| >1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-14 Score=128.10 Aligned_cols=125 Identities=18% Similarity=0.182 Sum_probs=97.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhh---ccCccCCHHHHHhhc-----CeEEEEE--ECCEEEEEEEEEEec----CCC
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL-----DSFYVVE--REGQIIACAALFPFF----KEK 512 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~---~~~~~~~~e~l~~~i-----~~~~V~~--~dg~IVG~~~l~~~~----~~~ 512 (609)
+.+.||+++++|++.+.+++...... .+..++..+.+...+ ..+++++ .++++||++.+.+.. ...
T Consensus 3 ~~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~ 82 (152)
T 1qsm_A 3 DNITVRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKD 82 (152)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSC
T ss_pred ccEEEEEcchhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHhcCCCceeEEEEEeCCCCeEEEEEEEEecCCcccccc
Confidence 44579999999999999998753222 122223334444443 2467778 789999999997532 346
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
.++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+++||+....
T Consensus 83 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 145 (152)
T 1qsm_A 83 KIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAPKI 145 (152)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECSEE
T ss_pred ceEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcCCCccce
Confidence 789999999999999999999999999999999999998877 37899999999996543
|
| >3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=131.36 Aligned_cols=126 Identities=17% Similarity=0.210 Sum_probs=101.9
Q ss_pred cccccccCCcCCHHHHHHHHhhhHh------hccCccCCHHHHHhhc---------CeEEEEEECCEEEEEEEEEEecCC
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFFKE 511 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~------~~~~~~~~~e~l~~~i---------~~~~V~~~dg~IVG~~~l~~~~~~ 511 (609)
+.+.||+++++|++.+.++++.... ..+..+++.+.+..++ ..+|++..++++||++.+.+....
T Consensus 12 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~ 91 (188)
T 3owc_A 12 PELQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRN 91 (188)
T ss_dssp -CEEEEECCGGGHHHHHTTCCSHHHHHHHHCTTCCSSCCGGGGHHHHHHHHSSSCSEEEEEEEETTEEEEEEEEEEETTT
T ss_pred CeEEEEECcHHHHHHHHHHHhChHHHhhhcCccccCcccHHHHHHHHHHhccCCCCcEEEEEEECCcEEEEEEEEecCCC
Confidence 3457999999999999998865321 2223334444333322 357888889999999999966577
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|+|++|++.++++|++ .|++.+.+.+ .++.+||+|+||+..+..
T Consensus 92 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 157 (188)
T 3owc_A 92 GVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLR 157 (188)
T ss_dssp TEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHHSTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEEEEEcHHHhCCChhHHHHHHHHHHHHHhhCceEEEEEEecCCHHHHHHHHHcCCEEeeeE
Confidence 899999999999999999999999999999999 5999999988 379999999999998765
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.9e-14 Score=128.33 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=105.3
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc-c----CccCCHHHHHhhcC------eEEEEEECCEEEEEEEEEEecC---CCe
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG-A----LVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK---EKC 513 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~-~----~~~~~~e~l~~~i~------~~~V~~~dg~IVG~~~l~~~~~---~~~ 513 (609)
+..||+++++|++.+.++........ + ......+.+...+. .++++..++++||++.+.+... ...
T Consensus 4 ~~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 83 (169)
T 3g8w_A 4 MNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHK 83 (169)
T ss_dssp CCCEEECCGGGHHHHHHHHHTCCCTTCHHHHHHHHCCHHHHHHHHSTTCTTEEEEEEESSSCEEEEEEEEECCSTTTTTE
T ss_pred ceEEEecChHHHHHHHHHHHHhhhhcccCCccccccCHHHHHHHhCCCCcceEEEEEEECCEEEEEEEEEeccccccCce
Confidence 45799999999999999976543221 1 11233344444441 4678888999999999986432 267
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
++|..++|+| ||+|+|++||+.++++|++.|++++.+.+ .++.+||+|+||+..+...-.. ..+....+.
T Consensus 84 ~~i~~~~v~~--rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~d~ 157 (169)
T 3g8w_A 84 AILENNFVKN--NDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNAS----KIGNEYFDE 157 (169)
T ss_dssp EEEEEEEEGG--GCHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEEEEEEEEE----EETTEEEEE
T ss_pred EEEEEEEEcc--CCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCCEEeeeecCcE----EECCEehhH
Confidence 8999999999 99999999999999999999999999877 4799999999999988652111 111222355
Q ss_pred eEEeecCCC
Q 007275 590 YYMKKLLPD 598 (609)
Q Consensus 590 i~mkkll~~ 598 (609)
++|.+.+..
T Consensus 158 ~~m~~~l~~ 166 (169)
T 3g8w_A 158 NWLIYSTTE 166 (169)
T ss_dssp EEEEEECC-
T ss_pred HHHHhhccc
Confidence 666665553
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-14 Score=128.29 Aligned_cols=121 Identities=21% Similarity=0.354 Sum_probs=97.6
Q ss_pred cccccCCcCCHH-HHHHHHhhhHhhccCccCCHHHHHhhc---------CeEEEEEE--CCEEEEEEEEEEec-----CC
Q 007275 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (609)
Q Consensus 449 ~~IR~a~~~D~~-~I~~L~~~~~~~~~~~~~~~e~l~~~i---------~~~~V~~~--dg~IVG~~~l~~~~-----~~ 511 (609)
..||+++.+|++ .+.+++...... .+++.+.+...+ ..++++++ ++++||++.+.+.. ..
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 81 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQLTVT---GSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCG 81 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEEecCchhhHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEeccccCCCCC
Confidence 469999999999 999987754322 246666655532 24566677 79999999998632 25
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|+|++||+.+++++++.|+..+.+.+. .+.+||+++||+..+..
T Consensus 82 ~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 143 (149)
T 3t90_A 82 KAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKCGMSNKSIQ 143 (149)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEECCCCGGGHHHHHTTTCCCCCCC
T ss_pred CceEEEEEEECHHHhCCcHHHHHHHHHHHHHHHCCCeEEEEeccccHHHHHHHCCCeeccce
Confidence 67899999999999999999999999999999999999999873 56699999999987654
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=8.4e-14 Score=128.02 Aligned_cols=124 Identities=21% Similarity=0.258 Sum_probs=98.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCC--------HHHHHhhc----CeEEEEEEC-CEEEEEEEEEEec----CC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--------DEELLKAL----DSFYVVERE-GQIIACAALFPFF----KE 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~--------~e~l~~~i----~~~~V~~~d-g~IVG~~~l~~~~----~~ 511 (609)
..||+++++|++.+.++++.........++. .+.+...+ ..+++++.+ +++||++.+.... ..
T Consensus 10 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~ 89 (158)
T 1vkc_A 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYV 89 (158)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTCS
T ss_pred ceeccCCHHHHHHHHHHHHhhhHHhhcCCCCchhhhhhHHHHHHHHhcCCCcEEEEEEcCCCcEEEEEEEEEeccccCCC
Confidence 4699999999999999998765433333333 22232222 247788888 9999999998643 45
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH---HHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT---RTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~---~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|+|++||+.+++++++.|++.+.+.+. .+.+||+|+||+..+..
T Consensus 90 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~GF~~~~~~ 153 (158)
T 1vkc_A 90 KIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALI 153 (158)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCCC
T ss_pred CEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEEEeCCCcHHHHHHHCCCEeeEEE
Confidence 67899999999999999999999999999999999999999762 68999999999987653
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.2e-14 Score=126.07 Aligned_cols=121 Identities=21% Similarity=0.201 Sum_probs=95.5
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH----hhc----CeEEEEEE--CCEEEEEEEEEEecC----CCeEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL----KAL----DSFYVVER--EGQIIACAALFPFFK----EKCGE 515 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~----~~i----~~~~V~~~--dg~IVG~~~l~~~~~----~~~~e 515 (609)
.||+++++|++.+.++++..... +..+.+.+... ..+ ..+++++. ++++||++.+.+... ...++
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~~ 80 (153)
T 2eui_A 2 RIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWI 80 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEEE
T ss_pred eeEeCCHhhHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCCCeEEEEEecCCCcEEEEEEEEecCCCCccCceEE
Confidence 58999999999999998753322 22223333222 222 45788888 899999999975422 35689
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+.
T Consensus 81 i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 140 (153)
T 2eui_A 81 LNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQE 140 (153)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCS
T ss_pred EEEEEEcHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCEEecc
Confidence 999999999999999999999999999999999999987 37899999999998654
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.9e-13 Score=123.25 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=98.0
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCc--------cCCH----HHHHhhc---C---eEEEEE-ECCEEEEEEEEEEecC
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALV--------RRTD----EELLKAL---D---SFYVVE-REGQIIACAALFPFFK 510 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~--------~~~~----e~l~~~i---~---~~~V~~-~dg~IVG~~~l~~~~~ 510 (609)
.||+++.+|++.+.+++.......+.. .+.. +.+...+ . .++++. .++++||++.+.+...
T Consensus 2 ~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~ 81 (174)
T 2cy2_A 2 RIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDRA 81 (174)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECCS
T ss_pred ceeecCHhHHHHHHHHHHHHHHHhhcCcCCHHHHhhhhhhhhHHHHHHHHcCCCcCceEEEEEecCCEEEEEEEEecCCC
Confidence 589999999999999988765443321 1121 1222222 2 466776 7899999999986441
Q ss_pred ----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 511 ----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 511 ----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
...++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+...
T Consensus 82 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 152 (174)
T 2cy2_A 82 SGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGERE 152 (174)
T ss_dssp CSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCceEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHcCCeeeceEE
Confidence 46789999999999999999999999999999999999999987 3789999999999988654
|
| >3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.7e-13 Score=124.90 Aligned_cols=124 Identities=13% Similarity=0.068 Sum_probs=99.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC--ccCCHHHHHhhc-------CeEEEEEE--CCEEEEEEEEEEecCCCeEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFFKEKCGEV 516 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~--~~~~~e~l~~~i-------~~~~V~~~--dg~IVG~~~l~~~~~~~~~eI 516 (609)
...||+++++|++.+.+++++.....+. .+.+.+....++ ...|++.. ++++||++.+.+......+++
T Consensus 7 ~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~~~~~~~~~~~~i 86 (168)
T 3fbu_A 7 RLLIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPVILIGENILVGHIVFHKYFGEHTYEI 86 (168)
T ss_dssp SEEECCCCGGGHHHHHHHHTCTTTTTTSTTCSCCHHHHHHHHHHTTC--CCEEEEEETTTTEEEEEEEEEEEETTTEEEE
T ss_pred ceEEEeCCHHHHHHHHHHhCCHHHHHhCCCCCCCHHHHHHHHHHHHhcccceEEEEECCCCCEEEEEEEEeecCCCcEEE
Confidence 3579999999999999998764333332 245666655554 22566655 899999999987655677888
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.+.|+|+|||+|+|++|++.++++|++. |++++.+.+ .++.+||+|+||+..+..
T Consensus 87 -~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 146 (168)
T 3fbu_A 87 -GWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYF 146 (168)
T ss_dssp -EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred -EEEECHHHhcCCHHHHHHHHHHHHHHhhCCceEEEEEeccCChHHHHHHHHCCCeEEEEe
Confidence 5669999999999999999999999876 999999988 378999999999998865
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.9e-13 Score=121.96 Aligned_cols=126 Identities=11% Similarity=0.127 Sum_probs=100.7
Q ss_pred ccccccccCCcCCHHHHHHHHhhh--Hhhcc-CccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEe-cCCCe
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPL--VESGA-LVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPF-FKEKC 513 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~--~~~~~-~~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~-~~~~~ 513 (609)
.+.+.||+++++|++.+.+++... ....+ ....+.+.+..++ ..++++..++++||++.+.+. .....
T Consensus 9 ~~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~ 88 (160)
T 3exn_A 9 VLTLDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPVGYLDAKLGYPEAED 88 (160)
T ss_dssp CCCCEEEECCGGGHHHHHHHHHTCHHHHHHTTCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEETCSSTTC
T ss_pred cCceEEEECChhhHHHHHHHHHhChHHHhccccCCCChHHHHHHHHHhhhCCCceEEEEEECCeEEEEEEeecccCCCCc
Confidence 345679999999999999998763 22222 1234555555443 357888899999999999854 24578
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
++|..++|+|+|||+|+|++|++.+++++++ +..+.+.+ .++.+||+++||+..+...
T Consensus 89 ~~i~~l~v~p~~rg~Gig~~ll~~~~~~~~~--~~~i~~~~~~~n~~a~~~y~~~Gf~~~~~~~ 150 (160)
T 3exn_A 89 ATLSLLLIREDHQGRGLGRQALERFAAGLDG--VRRLYAVVYGHNPKAKAFFQAQGFRYVKDGG 150 (160)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHHHTCTT--CCEEEEEEESSCHHHHHHHHHTTCEEEEECS
T ss_pred eEEEEEEECHHHcCCCHHHHHHHHHHHHHhh--CCeEEEEEeeCCHHHHHHHHHCCCEEcccCC
Confidence 9999999999999999999999999999988 88888887 3789999999999987763
|
| >1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.7e-14 Score=128.55 Aligned_cols=124 Identities=16% Similarity=0.182 Sum_probs=95.6
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCC-HHHHHh-hcCeEEEEEECCEEEEEEEEEEecCC-CeEEEEEEEEcccC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLK-ALDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPEC 525 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~-~e~l~~-~i~~~~V~~~dg~IVG~~~l~~~~~~-~~~eI~~iaV~p~~ 525 (609)
..+|+++.+|++.+.++.+.........+.. .+.... ....++++..++++||++.+.+.... ..++|..++|+|+|
T Consensus 8 ~~ir~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~ 87 (150)
T 1xeb_A 8 KHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAA 87 (150)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGG
T ss_pred eeehhCCHHHHHHHHHHHHHHhhcccCCChhhhhhhhccCCcEEEEEEECCEEEEEEEEEccCCCCCeEEEEEEEECHHH
Confidence 3589999999999999987654333221111 011101 12456777889999999999854322 56899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHC-CCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 526 RGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
||+|+|++|++.+++++++. |+..+.+.+ ..+.+||+++||+..+..
T Consensus 88 rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~~~Gf~~~~~~ 136 (150)
T 1xeb_A 88 RGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEV 136 (150)
T ss_dssp TTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCC
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCEEEEechhHHHHHHHHcCCEECCcc
Confidence 99999999999999999997 999999988 478999999999998744
|
| >2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=8.9e-14 Score=127.72 Aligned_cols=125 Identities=11% Similarity=0.028 Sum_probs=93.5
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHh----hcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~----~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
|...||+++++|++.+.++........+.... .+.+.. .....+++..++++||++.+.... ....+|..++|+
T Consensus 2 m~l~ir~~~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~-~~~~~i~~~~v~ 79 (149)
T 2fl4_A 2 MEIHFEKVTSDNRKAVENLQVFAEQQAFIESM-AENLKESDQFPEWESAGIYDGNQLIGYAMYGRWQ-DGRVWLDRFLID 79 (149)
T ss_dssp CCCCCCCCCTTTHHHHHTCCCTTCHHHHHHHH-HHHHHHHHHCTTEEEEEEEETTEEEEEEEEEECT-TSCEEEEEEEEC
T ss_pred CeEEEEECCHHHHHHHHhhcCCHHHHhccCCH-HHHHHHHhcCcccceEEEEECCeEEEEEEEeecC-CCcEEEEEEEEC
Confidence 34579999999999999886442222221111 111211 112356777899999999876332 456788899999
Q ss_pred ccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 523 PECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
|+|||||+|++||+.+++++++. +++++.+.+ .+|.+||+|+||+..+...
T Consensus 80 ~~~~g~Gig~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~~ 135 (149)
T 2fl4_A 80 QRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGELD 135 (149)
T ss_dssp GGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEEC
T ss_pred HHHcCCCHHHHHHHHHHHHHHHhCCCCEEEEEEECCCHHHHHHHHHCCCEEecccc
Confidence 99999999999999999999874 799999988 3799999999999988763
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.5e-13 Score=121.08 Aligned_cols=117 Identities=12% Similarity=0.121 Sum_probs=94.5
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
.+|. +++|++.+.++++... ..+++.+.+...+ ..++++..++++||++.+.+ .....++|..++|+|+||
T Consensus 3 ~i~~-~~~d~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~r 76 (133)
T 1y7r_A 3 KVTY-DIPTCEDYCALRINAG----MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIG-DGGTVFQIVDIAVLKSYQ 76 (133)
T ss_dssp EEEC-SCCCHHHHHHHHHHTT----CCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGGC
T ss_pred eEEe-cccCHHHHHHHHHhCC----CCCcCHHHHHhhCCcCceEEEEEECCEEEEEEEEEc-cCCCeEEEEEEEEcHHHh
Confidence 5677 7999999999976543 2346677776665 34558888999999999874 345678999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHHHHCCCeEeeee
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fYek~GF~~~~~~ 572 (609)
|+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 77 g~Gig~~ll~~~~~~~~~~g~~~~~~~~~~n~~a~~~y~k~Gf~~~~~~ 125 (133)
T 1y7r_A 77 GQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEPD 125 (133)
T ss_dssp SSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTTT
T ss_pred cCchHHHHHHHHHHHHHHcCCCEEEEEEeCCchHHHHHHHcCCeECCCC
Confidence 9999999999999999998977655554 478999999999987644
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.3e-13 Score=129.52 Aligned_cols=146 Identities=10% Similarity=0.090 Sum_probs=110.2
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC----ccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEe---cCCCeEEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL---DSFYVVEREGQIIACAALFPF---FKEKCGEVA 517 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~---~~~~~~eI~ 517 (609)
.+.||+++++|++.+.++++........ ..+..+.+...+ ..+++++.++++||++.+.+. ......++.
T Consensus 34 ~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~ 113 (197)
T 3ld2_A 34 SMKISPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLDYSSLYPFPSGQHIVTF 113 (197)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHCCTTTCCSCSCCCCHHHHHHHHTTTCEEEEEEESSCEEEEEEEEESCSSGGGTTEEEE
T ss_pred cEEEEeCCHHHHHHHHHHHHHhccccCCCCccccccHHHHHHhhCCCCeEEEEEeCCCEEEEEEEEeccCCCCCCeEEEE
Confidence 3579999999999999998775443221 235566665554 467888899999999999864 234567777
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEe
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 593 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mk 593 (609)
.++|+|+|||+|+|++|++.+++++++. ++.+++.+ .++.+||+++||+..+...-.. ..+....+.++|.
T Consensus 114 ~~~V~p~~rg~Gig~~ll~~~~~~a~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~g~~~~~~~~~ 188 (197)
T 3ld2_A 114 GIAVAEKERRKGIGRALVQIFLNEVKSD-YQKVLIHVLSSNQEAVLFYKKLGFDLEARLTKQF----FLKGQYVDDLIYS 188 (197)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHTTT-CSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEEEEE
T ss_pred EEEEcHHHcCCCHHHHHHHHHHHHHHHH-HHeEEEEeeCCCHHHHHHHHHCCCEEeeeccceE----EECCeecceeeee
Confidence 9999999999999999999999999999 99999987 3789999999999988642110 0111223667777
Q ss_pred ecCCC
Q 007275 594 KLLPD 598 (609)
Q Consensus 594 kll~~ 598 (609)
+.+..
T Consensus 189 ~~l~~ 193 (197)
T 3ld2_A 189 YDLEA 193 (197)
T ss_dssp EECC-
T ss_pred ehhcc
Confidence 77654
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.6e-13 Score=126.61 Aligned_cols=125 Identities=20% Similarity=0.176 Sum_probs=95.2
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH----hhc--CeEEEEEECCEEEEEEEEEEec----CCCeEEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL----KAL--DSFYVVEREGQIIACAALFPFF----KEKCGEVA 517 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~----~~i--~~~~V~~~dg~IVG~~~l~~~~----~~~~~eI~ 517 (609)
...||+++++|++.+.+++............+.+... ..+ ..++++..++++||++.+.... ....++|.
T Consensus 22 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~i~ 101 (172)
T 2r1i_A 22 VEVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILD 101 (172)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTSSSEEEEEETTTTCEEEEEEEECCTTCSSCEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCeEEEEECCeeEEEEEEEeccCCCCCCceEEEE
Confidence 3579999999999999998864333211222333332 222 2233333399999999987533 24678999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+|+||+..+..
T Consensus 102 ~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 160 (172)
T 2r1i_A 102 ELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPN 160 (172)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCBSSCTT
T ss_pred EEEECcccccCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEecccC
Confidence 9999999999999999999999999999999999988 378999999999987654
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.6e-13 Score=125.83 Aligned_cols=121 Identities=21% Similarity=0.302 Sum_probs=90.8
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHh----hc---------------CeEEEEE--ECCEEEEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----AL---------------DSFYVVE--REGQIIACAALFP 507 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~----~i---------------~~~~V~~--~dg~IVG~~~l~~ 507 (609)
..||+++++|++.+.++++.... ...++.+.+.. |. ..++++. .++++||++.+..
T Consensus 8 ~~IR~a~~~D~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~ 84 (160)
T 1i12_A 8 FYIRRMEEGDLEQVTETLKVLTT---VGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIII 84 (160)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSC---CCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEE
T ss_pred cEEecCCHHHHHHHHHHHHhccc---CCCCCHHHHHHHHHHHHhccccccccccccccceEEEEEEccCCeEEEEEEEEe
Confidence 36999999999999987643211 12233333221 11 1135554 5799999998864
Q ss_pred ecC-----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 508 FFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 508 ~~~-----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
..+ ...++|..++|+|+|||||+|++||+.++++|++.|++++.+.+. .+.+||+|+||+..+..
T Consensus 85 ~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~fY~k~GF~~~g~~ 155 (160)
T 1i12_A 85 ERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVE 155 (160)
T ss_dssp EECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEE
T ss_pred cccccccCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcChhhHHHHHHCCCEEcCee
Confidence 321 235789999999999999999999999999999999999999983 56799999999998764
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=9.6e-14 Score=128.48 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=93.4
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc--cCccCCH--------HHHHhhc--------CeEEEEEEC-CEEEEEEEEEEe
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG--ALVRRTD--------EELLKAL--------DSFYVVERE-GQIIACAALFPF 508 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~--~~~~~~~--------e~l~~~i--------~~~~V~~~d-g~IVG~~~l~~~ 508 (609)
...||+++++|++.+.++........ ....++. +.+..++ ..+|+++.+ +++||++.+...
T Consensus 2 ~l~lR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~ 81 (158)
T 1on0_A 2 TIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAE 81 (158)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEEC
T ss_pred ceeeeeCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEcCCCCceEEEEEEec
Confidence 35799999999999998764432211 0112222 1222222 135666666 899999988753
Q ss_pred c--CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 509 F--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 509 ~--~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
. ....+++..++|+|+|||||+|++||+.++++|++.|+++|.+.+ .+|.+||+|+||+..+.
T Consensus 82 ~~~~~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~ 150 (158)
T 1on0_A 82 PEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDV 150 (158)
T ss_dssp TTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCCEEEECCCTTCHHHHHHHHHTTCCCCCC
T ss_pred CCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEEeE
Confidence 3 135688899999999999999999999999999999999999988 37999999999998764
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.3e-14 Score=124.25 Aligned_cols=119 Identities=18% Similarity=0.161 Sum_probs=91.6
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~ 525 (609)
..||+++++|++.+.++++...... .+.+.+.+...+ ..+++++.++++||++.+.+ .....++|..++|+|+|
T Consensus 2 ~~ir~~~~~D~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 78 (138)
T 2atr_A 2 ITIKKQEIVKLEDVLHLYQAVGWTN--YTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPSY 78 (138)
T ss_dssp EEEEEESCCCHHHHHHHHHTTCCCC-------CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTTS
T ss_pred eEEEEcCccCHHHHHHHHHHcCCCc--hhhhHHHHHHhcCCCeEEEEEEECCeeEEEEEEEe-CCCCeEEEEEEEEchhh
Confidence 4699999999999999976632111 223344444443 35688889999999999873 44578999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHHHHCCCeEeeee
Q 007275 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fYek~GF~~~~~~ 572 (609)
||+|+|++|++.+++++++.|+ +.+.+ ..+.+||+++||+..+..
T Consensus 79 rg~Gig~~ll~~~~~~~~~~~~--~~l~~~~n~~a~~~y~k~Gf~~~~~~ 126 (138)
T 2atr_A 79 QRQGIGSSLMKEALGNFKEAYQ--VQLATEETEKNVGFYRSMGFEILSTY 126 (138)
T ss_dssp CSSSHHHHHHHHHHGGGTTCSE--EECCCCCCHHHHHHHHHTTCCCGGGG
T ss_pred cCCCHHHHHHHHHHHHHHhcCe--EEEEeCCChHHHHHHHHcCCccccee
Confidence 9999999999999999998887 34444 479999999999987654
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=4.6e-14 Score=130.48 Aligned_cols=141 Identities=21% Similarity=0.278 Sum_probs=107.5
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccC-------ccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~-------~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
.||+++.+| +.+.+++......... ..+..+.+......+++++.++++||++.+.+. .+..++|..++|+
T Consensus 2 ~iR~~~~~D-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~V~ 79 (159)
T 1yx0_A 2 HIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRTS 79 (159)
T ss_dssp CEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCCS
T ss_pred eeEEcCcCC-HHHHHHHHHHHHHhhccCCcchhhhhhHHHhcCCCceEEEEEECCEEEEEEEEEEc-CCCcEEEEEEEEC
Confidence 589999999 9999998764332111 112223333333568888889999999999854 3568899999999
Q ss_pred ccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH------HHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 523 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~------~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
|+|||+|+|++|++.+++++++.|++.+.+.+. ++.+||+++||+..+.. ..|.....+.++|+.++
T Consensus 80 p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~-------~~~~~~~~~~~~~~~~~ 152 (159)
T 1yx0_A 80 ASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF-------ADYGEDPNSVFMTKKLL 152 (159)
T ss_dssp TTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCCC-------TTSCCCTTCCCEEECC-
T ss_pred HhhcCCCHHHHHHHHHHHHHHhCCCcEEEEEecccccCchHHHHHHHcCCEEcccc-------ccccCCCcchhhhHHHH
Confidence 999999999999999999999999999998762 58899999999997654 24556677888888888
Q ss_pred CCC
Q 007275 597 PDT 599 (609)
Q Consensus 597 ~~~ 599 (609)
+.+
T Consensus 153 ~~~ 155 (159)
T 1yx0_A 153 EHH 155 (159)
T ss_dssp ---
T ss_pred hhc
Confidence 653
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.6e-14 Score=133.82 Aligned_cols=149 Identities=15% Similarity=0.162 Sum_probs=106.6
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccC----c------------------cCCHH-----HHHhhc----CeEEEEE
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGAL----V------------------RRTDE-----ELLKAL----DSFYVVE 494 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~----~------------------~~~~e-----~l~~~i----~~~~V~~ 494 (609)
.|...||+++++|++.|.++.+........ . .+... .+...+ ..+++++
T Consensus 3 ~m~i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (187)
T 3pp9_A 3 AMSLLIRELETNDLDNFPEIDDSFIVNARLMLSLSKVNRRIEYTVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIAL 82 (187)
T ss_dssp --CCEEEECCGGGTTSCCCCCCEEEEEEEEEEEECSSTTCEEEEEEEEEEEEEECC-----CCCGGGGSSCSSEEEEEEE
T ss_pred ceeEEEEeccccchhhHhhccCceEEeeEEEEecccccccceeehhhcchhhhccCCccchHHHHHHHHhCCCcEEEEEE
Confidence 355789999999999999885432111100 0 01111 122222 3478888
Q ss_pred ECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 495 ~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
.++++||++.+.+ .....++|..++|+|+|||+|+|++||+.+++++++.|++.+.+.+ ..+.+||+|+||+..+
T Consensus 83 ~~~~~vG~~~~~~-~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~ 161 (187)
T 3pp9_A 83 LHNQIIGFIVLKK-NWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGG 161 (187)
T ss_dssp ETTEEEEEEEEEE-CTTSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred ECCeEEEEEEEEc-CCCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEec
Confidence 9999999999984 3457789999999999999999999999999999999999999988 3789999999999998
Q ss_pred eecchhHhhhhcccCCCceeEEeecCC
Q 007275 571 IEMIPEERRKRINLSRNSKYYMKKLLP 597 (609)
Q Consensus 571 ~~~lp~~~~~~y~~~~~s~i~mkkll~ 597 (609)
....... ..........++|.++|+
T Consensus 162 ~~~~~~~--~~~~~~~e~~~~~~~~l~ 186 (187)
T 3pp9_A 162 FDFLVYK--GLNMTSDEVAIYWYLHFD 186 (187)
T ss_dssp EESSGGG--GTCSSSCCCEEEEEEEC-
T ss_pred eEeeecc--CCcccCCcEEEEEEeecC
Confidence 7654322 122223445677777665
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.49 E-value=7.5e-13 Score=126.59 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=104.9
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhh---ccC-------ccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecC---
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVES---GAL-------VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK--- 510 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~---~~~-------~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~--- 510 (609)
.+...||+++.+|++.+.+++...... ... ...+.+.+..++ ..++++..++++||++.+.+...
T Consensus 17 ~~~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~ 96 (201)
T 2pc1_A 17 FQGMQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVY 96 (201)
T ss_dssp ETTEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCTTCSTTCSSCHHHHHHHHHHTCEEEEEETTEEEEEEEEEEECCGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHHHHHHHHHhCCCCCccccCCCCHHHHHHHHhcCceEEEEECCeEEEEEEEecCCchhh
Confidence 344679999999999999998764311 101 122334455444 45777888999999999986432
Q ss_pred ------------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecc
Q 007275 511 ------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 511 ------------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~l 574 (609)
...++|..++|+|+|||+|+|++|++.+++ +.|++.+.+.+ .++.+||+|+||+.++....
T Consensus 97 ~~~~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~---~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 173 (201)
T 2pc1_A 97 DAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPL 173 (201)
T ss_dssp GGCBSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHHHHHHH---HSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEECS
T ss_pred ccccccccccCCCcEEEEEEEEECHHHhCCCHHHHHHHHHHH---hCCCceEEEEEecCCHHHHHHHHHCCCEEEEEEEe
Confidence 156789999999999999999999999999 78999999988 36999999999999887743
Q ss_pred hhHhhhhcccCCCceeEEeecCCC
Q 007275 575 PEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 575 p~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
+ ...++|.|.+..
T Consensus 174 ~-----------~~~~~~~k~l~~ 186 (201)
T 2pc1_A 174 D-----------GVRLAYQKIKEK 186 (201)
T ss_dssp S-----------SCEEEEEEECCC
T ss_pred c-----------cchhhhHHHhcc
Confidence 2 345666666643
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.5e-14 Score=129.93 Aligned_cols=124 Identities=17% Similarity=0.140 Sum_probs=82.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc---cCcc-CCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEecCCCeEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVR-RTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~---~~~~-~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~~~~~~eI 516 (609)
..||+++.+|++.|.++++...... +... .+.+....++ ..+++++.++++||++.+........++|
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i 93 (159)
T 2aj6_A 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNI 93 (159)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEEE
T ss_pred hhcCCCchhhHHHHHHHHHHHHhccccccccCCCCHHHHHHHHHHHHhCCCcEEEEEEECCeEEEEEEEEeecCCCEEEE
Confidence 4699999999999999998754432 2211 1122222221 35778888999999999885556678999
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 94 ~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 153 (159)
T 2aj6_A 94 ELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHVK 153 (159)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCCC-----------------------
T ss_pred EEEEECHHHccCCHHHHHHHHHHHHHHHcCCcEEEEEeccCCHHHHHHHHHCCCEEeeeE
Confidence 99999999999999999999999999999999988877 268999999999987643
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-13 Score=127.26 Aligned_cols=121 Identities=23% Similarity=0.281 Sum_probs=95.9
Q ss_pred cccccCCcCCHH-HHHHHHhhhHhhccCccCCHHHHHhhc---------CeEEEEEE--CCEEEEEEEEEEec-----CC
Q 007275 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (609)
Q Consensus 449 ~~IR~a~~~D~~-~I~~L~~~~~~~~~~~~~~~e~l~~~i---------~~~~V~~~--dg~IVG~~~l~~~~-----~~ 511 (609)
..||+++.+|++ .+..++....... .++.+.+...+ ..++++++ ++++||++.+.... ..
T Consensus 22 ~~iR~~~~~D~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~~~~~~~~~~ 98 (165)
T 4ag7_A 22 FKVRPLAKDDFSKGYVDLLSQLTSVG---NLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAG 98 (165)
T ss_dssp EEEEECBGGGGTTTHHHHHHHHSCCT---TCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEeeCCHhHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEEecccccCCCC
Confidence 479999999999 5888877543332 24444444332 34677887 99999999987421 23
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||||+|++||+.++++|++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 99 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~GF~~~~~~ 160 (165)
T 4ag7_A 99 SRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFYSQFGFQDDCNF 160 (165)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEEECSCGGGHHHHHTTTCEECCCC
T ss_pred cEEEEEEEEECHHhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeCHHHHHHHHHCCCCcccch
Confidence 5788999999999999999999999999999999999999987 466899999999876543
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=126.14 Aligned_cols=120 Identities=25% Similarity=0.285 Sum_probs=91.4
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc-----c-CccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG-----A-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~-----~-~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI 516 (609)
+.+.||+++++|++.+.+++....... + ..+++.+.+.... ..+++++.++++||++.+. + .+++
T Consensus 3 ~~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~----~-~~~~ 77 (160)
T 3f8k_A 3 DQIKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVGEASLH----K-DGEF 77 (160)
T ss_dssp --CEEEECCGGGHHHHHHHHHHSCHHHHHHHTHHHHHTC-----------CEEEEEEEETTEEEEEEEEE----T-TSBE
T ss_pred CcEEEEECCcchHHHHHHHHHhccccccceeeccccccCHHHHHHHhccCCceEEEEEECCeEEEEEEee----c-ceEE
Confidence 345799999999999999987643221 1 1223333333321 3468888999999999998 2 5667
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+|+||+.++..
T Consensus 78 -~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 136 (160)
T 3f8k_A 78 -SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMRFYE 136 (160)
T ss_dssp -EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEEECS
T ss_pred -EEEECHHHcCCCHHHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEEeec
Confidence 8999999999999999999999999999999999988 378999999999998654
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=6.1e-13 Score=129.93 Aligned_cols=142 Identities=15% Similarity=0.266 Sum_probs=106.5
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEec--------------
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~-------------- 509 (609)
...||+++.+|++.|.+++...+... ..++.+.+...+ ..++|++.++++|||+.+.+..
T Consensus 12 ~~~iR~a~~~D~~~i~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~~~~~~~ 89 (224)
T 2ree_A 12 YYNLRHPKIEDLRDLIALETLCWSEN--LQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQVP 89 (224)
T ss_dssp CEEEECCCGGGHHHHHHHHHHHSCTT--TCCCHHHHHHHHHHCGGGCEEEEESSCEEEEEEEEEESCGGGGTTCCTTTGG
T ss_pred ceEEEECCHHHHHHHHHHHHHhccCc--cccCHHHHHHHHHhCCCceEEEEECCEEEEEEEEeccCchhhchhhcccchh
Confidence 34799999999999999976643322 245666665544 3467888899999999886431
Q ss_pred -----CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEE--e-------------------------HH
Q 007275 510 -----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLL--T-------------------------TR 556 (609)
Q Consensus 510 -----~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~--t-------------------------~~ 556 (609)
.....+|..++|+|+|||+|+|++||+.++++|++. |++.+.+. + .+
T Consensus 90 ~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~~~l~~~~~~~~~~~~~~~y~~~~~~~g~~N~~ 169 (224)
T 2ree_A 90 LLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLLVDP 169 (224)
T ss_dssp GGCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECCSSGGGTTTSCHHHHTTCBCTTSCBSSH
T ss_pred hccCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCccEEEEeccCCccccCCCCCHHHHHHHHhcCCcccCc
Confidence 124578999999999999999999999999999996 99999832 1 25
Q ss_pred HHHHHHHCCCeEeeeecchhHhhhhccc----CCCceeEEeecCCC
Q 007275 557 TADWFKSRGFRECSIEMIPEERRKRINL----SRNSKYYMKKLLPD 598 (609)
Q Consensus 557 a~~fYek~GF~~~~~~~lp~~~~~~y~~----~~~s~i~mkkll~~ 598 (609)
+++||+++||+..+... .|.. .....++|.+.++.
T Consensus 170 a~~fY~k~GF~~~g~~~-------~y~~~~~~~~~~~~~m~~~l~~ 208 (224)
T 2ree_A 170 LLRFHQIHGAKIEKLLP-------GYRPKDWENQTCGVLVSYDIQH 208 (224)
T ss_dssp HHHHHHHTTCEEEEEET-------TSCTTCGGGTTCEEEEEECCTT
T ss_pred ceeeeecCCeEEEEEcc-------ccccccccCCCceEEEEEeccc
Confidence 89999999999987652 1111 12456888777753
|
| >2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.2e-13 Score=126.99 Aligned_cols=145 Identities=17% Similarity=0.196 Sum_probs=104.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC--cc-CCHHHHHhhc-------C-eEEEEEECCEEEEEEEEEEecC---CCe
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL-------D-SFYVVEREGQIIACAALFPFFK---EKC 513 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~--~~-~~~e~l~~~i-------~-~~~V~~~dg~IVG~~~l~~~~~---~~~ 513 (609)
...||+++++|++.+.++.+........ .+ .+.+.+...+ . .++++..++++||++.+.+... ...
T Consensus 7 ~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 86 (177)
T 2vi7_A 7 TIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHS 86 (177)
T ss_dssp CEEEEECCGGGHHHHHHHHTSHHHHTTSSCCSSCCHHHHHHHHTTC-CCTTEEEEEEEETTEEEEEEEEEECSSGGGTTE
T ss_pred cEEEEECCHHHHHHHHHHHhChhhhcccccCCCCCHHHHHHHHhhhcccCCcEEEEEEECCEEEEEEEEecCCccccceE
Confidence 3569999999999999998764433221 11 2334443322 2 4677788999999999985431 345
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCc
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 588 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s 588 (609)
+++ .++|+|+|||||+|++||+.++++|++. ++++|.+.+ .+|.+||+|+||+..+...-.. ..+....+
T Consensus 87 ~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~GF~~~g~~~~~~----~~~g~~~d 161 (177)
T 2vi7_A 87 GSI-GMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYA----VRDGRFVD 161 (177)
T ss_dssp EEC-TTCCEESSTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEE
T ss_pred EEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeeecccE----EECCEEEE
Confidence 677 7999999999999999999999999986 699999988 3799999999999987542110 01111235
Q ss_pred eeEEeecCC
Q 007275 589 KYYMKKLLP 597 (609)
Q Consensus 589 ~i~mkkll~ 597 (609)
.++|.++++
T Consensus 162 ~~~~~~~~~ 170 (177)
T 2vi7_A 162 VYSMARLRR 170 (177)
T ss_dssp EEEEEEECC
T ss_pred EEEeeeeec
Confidence 677776664
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-13 Score=128.02 Aligned_cols=126 Identities=12% Similarity=0.174 Sum_probs=98.6
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhcc--CccCCH--------HHHHhhc--------CeEEEEEEC-CEEEEEEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTD--------EELLKAL--------DSFYVVERE-GQIIACAALFP 507 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~--~~~~~~--------e~l~~~i--------~~~~V~~~d-g~IVG~~~l~~ 507 (609)
|.+.||+++++|++.+.+++.......+ ...+.. +.+..++ ..+|+++.+ +++||++.+.+
T Consensus 25 m~i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~ 104 (180)
T 1ufh_A 25 MTIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHA 104 (180)
T ss_dssp -CCEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHhhhhhccCCCcchhhhhhhHHHHHHHHHhhcCCCCeeEEEEEcCCCCEEEEEEEEe
Confidence 5578999999999999999876433211 011221 2333333 246788877 99999999986
Q ss_pred ecC--CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 508 FFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 508 ~~~--~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
... ...++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 105 ~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 175 (180)
T 1ufh_A 105 EPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVV 175 (180)
T ss_dssp CTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCCC
T ss_pred cCCCCCCcEEEEEEEECHhhcCCChHHHHHHHHHHHHHHCCCCEEEEEeccCcHHHHHHHHHCCCEEeeeE
Confidence 542 37889999999999999999999999999999999999999988 379999999999987653
|
| >2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.6e-13 Score=126.42 Aligned_cols=128 Identities=14% Similarity=0.091 Sum_probs=100.3
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccC----ccCCHHHHH-hhc--------CeEEEEEECCEEEEEEEEEEe-----
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELL-KAL--------DSFYVVEREGQIIACAALFPF----- 508 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~-~~i--------~~~~V~~~dg~IVG~~~l~~~----- 508 (609)
+.+.||+++++|++.+.++++......+. ...+.++.. .++ ..+|+++.++++||++.+...
T Consensus 24 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 103 (202)
T 2bue_A 24 DSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGD 103 (202)
T ss_dssp CCEEEEECCGGGHHHHHHHHTSHHHHTTSCGGGCSCCHHHHHHHHCHHHHHTTTEEEEEEEETTEEEEEEEEEEGGGCCT
T ss_pred CcEEEEECCHHHHHHHHHHHcCchhhhhcCCCcccccHHHHHHHHHHhhcCCCCceeEEEEECCEEEEEEEEEEeccccc
Confidence 34579999999999999998765443332 122333322 222 357888899999999998742
Q ss_pred ------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeeecc
Q 007275 509 ------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 509 ------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~~l 574 (609)
.....++|..++|+|+|||+|+|++|++.++++|++ .|++.+.+.+ ..+.+||+|+||+..+....
T Consensus 104 ~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~~~~~~ 180 (202)
T 2bue_A 104 GWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTT 180 (202)
T ss_dssp TSSTTCCCTTEEEEEEEESCGGGTTSSHHHHHHHHHHHHHHTSTTCCEEEECCCTTCHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccccCCCCceEEEEEEEChhhccCChHHHHHHHHHHHHHhCCCCcEEEeCcccCCHHHHHHHHHcCCEEeeeecC
Confidence 124578999999999999999999999999999998 5999999987 37899999999999987643
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.5e-13 Score=132.97 Aligned_cols=120 Identities=20% Similarity=0.233 Sum_probs=98.9
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
+...||+++.+|++.+.++..... ..+|..+.+ ....++++++++++||++.+......+.++|..++|+|+||
T Consensus 97 ~~~~iR~~~~~D~~~i~~l~~~~~----~~~~~~~~~--~~~~~~v~~~~g~lVG~~~~~~~~~~~~~~i~~l~V~p~~R 170 (228)
T 3ec4_A 97 DDPGIVALGETDVPEMTALALATE----PGPWASGTW--RYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYR 170 (228)
T ss_dssp CCTTCEECCGGGHHHHHHHHHHSC----CSCCCTTGG--GSSCEEEEEETTEEEEEEEECCCSSTTEEEEEEEEECGGGT
T ss_pred CCCEEEECChhCHHHHHHHHHhhC----CCCcChhhc--cCccEEEEEECCEEEEEEEEEEecCCCcEEEEEEEECHHHc
Confidence 445799999999999999965443 233443332 23578899999999999998844256789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
|||+|++||+.+++++++.| .++++.+ ..+.+||+|+||+..+...
T Consensus 171 g~GiG~~Ll~~~~~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~~ 220 (228)
T 3ec4_A 171 GRGLAARLIRKVIAGMAARG-EVPYLHSYASNASAIRLYESLGFRARRAMT 220 (228)
T ss_dssp TSSHHHHHHHHHHHHHHHTT-CEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHcC-CeEEEEEeCCCHHHHHHHHHCCCEEEEEEE
Confidence 99999999999999999999 8888887 3689999999999987664
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.9e-13 Score=124.00 Aligned_cols=123 Identities=23% Similarity=0.285 Sum_probs=98.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc---CccCCHHHHHhh-c-----CeEEEEEECCE--------EEEEEEEEEecC-
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA-L-----DSFYVVEREGQ--------IIACAALFPFFK- 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~-i-----~~~~V~~~dg~--------IVG~~~l~~~~~- 510 (609)
..||+++++|++.+.++++....... ..+++.+.+... + ..+++++.+++ +||++.+.....
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ivG~~~~~~~~~~ 83 (171)
T 2b5g_A 4 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 83 (171)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHhccCCCcEEEEEEECCCcccccCCceEEEEEEEeecCC
Confidence 57999999999999999887543221 234555555444 2 45788887777 899999874322
Q ss_pred --CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 511 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 511 --~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
...++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 84 ~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~Gf~~~~~ 150 (171)
T 2b5g_A 84 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 150 (171)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred cCCceEEEEEEEECHhhhCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccCHHHHHHHHHcCCEeccc
Confidence 23478999999999999999999999999999999999999988 47999999999998754
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=3e-13 Score=122.10 Aligned_cols=118 Identities=20% Similarity=0.223 Sum_probs=93.7
Q ss_pred ccc-CCcCCHHHHHHHHhhhHhhccCccC--CHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcC
Q 007275 451 TRT-AKVTDLSGIKQIIQPLVESGALVRR--TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (609)
Q Consensus 451 IR~-a~~~D~~~I~~L~~~~~~~~~~~~~--~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~Rg 527 (609)
||. .+++|++.+.++++.........+. ..+.+ .....++++..++++||++.+.+ ..+.++|..++|+|+|||
T Consensus 3 i~~~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~~~~rg 79 (140)
T 1q2y_A 3 AVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDEL-ENESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHRS 79 (140)
T ss_dssp EEEECSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTT-GGGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGTT
T ss_pred eEEecChHHHHHHHHHHHHHhccccCCChHHHHhhc-cCCcEEEEEEECCeEEEEEEEEE--cCCcEEEEEEEEcHHHhc
Confidence 443 4788999999998876544321111 11111 12246788889999999999985 356799999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 528 QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+.
T Consensus 80 ~Gig~~ll~~~~~~~~~~g~~~i~l~~n~~~~~~y~~~Gf~~~~~ 124 (140)
T 1q2y_A 80 AGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSE 124 (140)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred cCHHHHHHHHHHHHHHHCCCcEEEEEecHHHHHHHHHCCCEEecc
Confidence 999999999999999999999999988 58999999999999876
|
| >3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-13 Score=125.69 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=100.4
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCc----cCCHHHHHhhc------CeEEEEEECCEEEEEEEEEEecC-----C
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK-----E 511 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~----~~~~e~l~~~i------~~~~V~~~dg~IVG~~~l~~~~~-----~ 511 (609)
+...||+++++|++.+..++.......+.. +.+.+.+...+ ..+|+++.++++||++.+.+... .
T Consensus 13 ~~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 92 (182)
T 3f5b_A 13 FRFCFKQMNKSQHELVLGWIHQPHINEWLHGDGLSNTIKDLHEFLNDGKPWATHWIAYDNEIPFAYLITSEIEKSEEYPD 92 (182)
T ss_dssp CCEEEEECCGGGHHHHHHHTTSHHHHTTSCHHHHHHHHHHHHHHHTTSCCSSEEEEEEETTEEEEEEEEEEECSCSSCTT
T ss_pred ceEEEEECCHHHHHHHHHHHcCchhhhhccCCCccccHHHHHHHHhcCCCCeEEEEEEeCCCcEEEEEEeccccccccCC
Confidence 446799999999999998866544333321 11334444443 45788889999999999976432 3
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
...+|..++|+|+|||+|+|++|++.+++++.+ |++++.+.+ .++.+||+|+||+..+....+
T Consensus 93 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~-~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 159 (182)
T 3f5b_A 93 GAVTLDLFICRLDYIGKGLSVQMIHEFILSQFS-DTKIVLINPEISNERAVHVYKKAGFEIIGEFIAS 159 (182)
T ss_dssp CEEEEEEEECSGGGCCHHHHHHHHHHHHHHHCT-TCSEEEECCBTTCHHHHHHHHHHTCEEEEEEEET
T ss_pred CceEEEEEEEChhhcCCchHHHHHHHHHHHhhC-CCCEEEEecCcCCHHHHHHHHHCCCEEEeEEecC
Confidence 568999999999999999999999999999954 999999988 379999999999999877443
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-13 Score=126.70 Aligned_cols=123 Identities=18% Similarity=0.227 Sum_probs=80.6
Q ss_pred cccCCcCCHHHHHHHHhhhHhhcc---Cc---cC-------CHHHHHh-hcCeEEEEEECCEEEEEEEEEEec-------
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGA---LV---RR-------TDEELLK-ALDSFYVVEREGQIIACAALFPFF------- 509 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~---~~---~~-------~~e~l~~-~i~~~~V~~~dg~IVG~~~l~~~~------- 509 (609)
||+++.+|++.+.+++........ .. .. ....... .-..+++++.++++||++.+....
T Consensus 5 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 84 (166)
T 3jvn_A 5 IRRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDDVIIGFITGHFCELISTVSK 84 (166)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHSCC----------CCCHHHHHHCTTEEEEEEESSSSEEEEEEEEEEEECCSSSC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhhcCchhhcchhhHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEeecccccccc
Confidence 999999999999999877543211 00 00 1111111 123578888899999999986421
Q ss_pred CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 510 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 510 ~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
....++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ .++.+||+++||+..+...
T Consensus 85 ~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~~ 152 (166)
T 3jvn_A 85 LVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHYL 152 (166)
T ss_dssp CEEEEEEEEEEECTTTCSSSHHHHHHHHHHHHHHTTTCSEEEECCC--CCBC----------------
T ss_pred CccEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCeEHHHHH
Confidence 124578999999999999999999999999999999999999988 2689999999999987553
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.3e-13 Score=124.55 Aligned_cols=127 Identities=18% Similarity=0.243 Sum_probs=94.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc--cC-ccCC-----HHHHHhhc--CeEEEEEECCEEEEEEEEEEec-------
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG--AL-VRRT-----DEELLKAL--DSFYVVEREGQIIACAALFPFF------- 509 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~--~~-~~~~-----~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~------- 509 (609)
....||+++.+|++.|.+++....... +. ..|. .+.+...+ ..+|+++.++++||++.+....
T Consensus 17 ~~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~ 96 (188)
T 3h4q_A 17 FQGMIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDI 96 (188)
T ss_dssp --CCEEECCGGGHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHTTCEEEEEETTEEEEEEEEESCCCGGGGGS
T ss_pred eeEEEEecCHhhHHHHHHHHHHHHHHHHhccccccccCCCcHHHHHHhhccCcEEEEEECCEEEEEEEEEccCccccccc
Confidence 345799999999999999988752111 10 1222 34444444 5688999999999999996421
Q ss_pred -----CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 510 -----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 510 -----~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
....++|..++|+|+| ||+|++||+.++++|++.|++.+.+.+ ..+.+||+|+||+.++....+
T Consensus 97 ~w~~~~~~~~~i~~l~V~p~~--~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 169 (188)
T 3h4q_A 97 DWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLME 169 (188)
T ss_dssp CCSSCCTTCEEEEEEECCSSC--TTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCEEC------
T ss_pred ccccCCCCeEEEEEEEECCcc--CcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCeEeceEEec
Confidence 2456889999999999 999999999999999999999999987 378999999999999877544
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-12 Score=119.52 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=102.1
Q ss_pred ccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcC
Q 007275 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (609)
Q Consensus 452 R~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~Rg 527 (609)
.+++++|++.+..+...+.. .+ .....+.+.... ..++++..++++||++.+.+.......++..++|+|+|||
T Consensus 16 ~~~~~~d~~~l~~l~~~f~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~rg 93 (168)
T 1z4r_A 16 PKANRRVLLWLVGLQNVFSH-QL-PRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQV 93 (168)
T ss_dssp TTSCHHHHHHHHHHHHHHHH-HC-TTSCHHHHHHHHTCTTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCS
T ss_pred CCCchhHHHHHHHHHHhccC-cC-ccccHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCCceEEEEEEECHHHhC
Confidence 55677888888888622222 21 122333333222 4678888999999999998766666789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCC
Q 007275 528 QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 597 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~ 597 (609)
+|+|++||+.+++++++.|+..+.+.. ..+.+||+++||+..+... ......|.....+.++|.+.|.
T Consensus 94 ~Gig~~ll~~~~~~~~~~g~~~~~~~~~~~a~~~y~k~GF~~~~~~~--~~~~~~y~g~~~d~~~m~~~l~ 162 (168)
T 1z4r_A 94 KGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVP--KSRYLGYIKDYEGATLMECELN 162 (168)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESCCCSC--HHHHTTTSCCCTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHcCCcEEEEeCChHHHHHHHHCCCcEeeccc--cchhhhhhhhcCCceEEEEecC
Confidence 999999999999999999999875443 5889999999999876542 2222223234456777777664
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A | Back alignment and structure |
|---|
Probab=99.45 E-value=3.8e-13 Score=126.82 Aligned_cols=122 Identities=26% Similarity=0.303 Sum_probs=97.2
Q ss_pred ccccccCCcCCHHH-HHHHHhhhHhhccCccCCHHHHHhhc--------CeEEEEEE--CCEEEEEEEEEEec-----CC
Q 007275 448 YEGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF-----KE 511 (609)
Q Consensus 448 ~~~IR~a~~~D~~~-I~~L~~~~~~~~~~~~~~~e~l~~~i--------~~~~V~~~--dg~IVG~~~l~~~~-----~~ 511 (609)
...||+++.+|++. +.++++..... .+++.+.+..++ ..+++++. ++++||++.+.... ..
T Consensus 38 ~~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ivG~~~~~~~~~~~~~~~ 114 (184)
T 2o28_A 38 GLVLRPLCTADLNRGFFKVLGQLTET---GVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCA 114 (184)
T ss_dssp TEEEEECBGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHHHSCEEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred ceEEEECCHHHHHHHHHHHHHHHhhc---CCCCHHHHHHHHHHhhcCCCeEEEEEEeCCCCcEEEEEEEEeccccCCCCC
Confidence 35799999999998 99887764332 244555544443 23566677 89999999987532 14
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|+|++|++.++++|++.|++.+.+.+ ....+||+|+||+..+..
T Consensus 115 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 176 (184)
T 2o28_A 115 KRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEEN 176 (184)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTEEEEEEEECGGGHHHHHTTTCEECSSE
T ss_pred CcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCeeeccc
Confidence 5789999999999999999999999999999999999999988 345899999999987654
|
| >3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-13 Score=148.92 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=70.3
Q ss_pred EeeeCHHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccc
Q 007275 236 VKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLI 304 (609)
Q Consensus 236 v~~v~~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI 304 (609)
+..++.+.|+.+|+.|.|||+++. +.+.+|.+.++ ++|.+|+.+|.+|+||.++++|||||++ |++++|
T Consensus 148 ~~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i 227 (446)
T 3tvi_A 148 DEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTI 227 (446)
T ss_dssp CHHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBC
T ss_pred ehHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEc
Confidence 344567889999999999999985 66778888776 5999999999999999999999999983 468999
Q ss_pred cccCHHHHHHHH
Q 007275 305 RFLTLQEADSLI 316 (609)
Q Consensus 305 ~~it~~e~~~l~ 316 (609)
++++.+|+.++.
T Consensus 228 ~~is~~e~~ela 239 (446)
T 3tvi_A 228 SKISYKELRELS 239 (446)
T ss_dssp SEEEHHHHHHTT
T ss_pred ceeCHHHHHHHH
Confidence 999999988874
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.1e-13 Score=125.28 Aligned_cols=122 Identities=14% Similarity=0.140 Sum_probs=90.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc-----c-CccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEec----CCCeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG-----A-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~-----~-~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~----~~~~~ 514 (609)
+.||+++.+|++.+.+++....... + ......+.+...+ ..++++++++++||++.+.... ....+
T Consensus 27 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 106 (168)
T 1bo4_A 27 IRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEI 106 (168)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred heeeeCCHhHHHHHHHHHHHHHHhhcCccccccccchHHHHHHHhcCCCeEEEEEEECCeEEEEEEEEeccCccCCCceE
Confidence 4699999999999999986422111 1 0112333333332 2467888899999999988543 13578
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH----HHHHHHHHCCCeEee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT----RTADWFKSRGFRECS 570 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~----~a~~fYek~GF~~~~ 570 (609)
+|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+. .+.+||+|+||+..+
T Consensus 107 ~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~g 166 (168)
T 1bo4_A 107 YIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIREEV 166 (168)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC------
T ss_pred EEEEEEECHHHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecCCChHHHHHHHHcCCeecc
Confidence 99999999999999999999999999999999999999883 688999999999865
|
| >3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.6e-12 Score=119.86 Aligned_cols=124 Identities=17% Similarity=0.137 Sum_probs=94.6
Q ss_pred ccccccCCcCCHHHHHHHHhhhHh--hccCc-----cCCHHHHHhhc-----------CeEEEEEE--CCEEEEEEEEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVE--SGALV-----RRTDEELLKAL-----------DSFYVVER--EGQIIACAALFP 507 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~--~~~~~-----~~~~e~l~~~i-----------~~~~V~~~--dg~IVG~~~l~~ 507 (609)
...||+++++|++.+.+++..... ..+.. ..+.+.+...+ ...+++.. ++++||++.+.+
T Consensus 9 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~ 88 (184)
T 3igr_A 9 HYQVRLIKSSDAVTIANYFMRNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSN 88 (184)
T ss_dssp TEEEEECCGGGHHHHHHHHHHTHHHHTTTSCCCCGGGGSHHHHHHHHHHHHHHHHTTSCEEEEEEETTTTEEEEEEEEEE
T ss_pred cEEEEecCHHHHHHHHHHHhccHhhcCcCCCCchhhccCHHHHHHHHHHHHhhcccCceEEEEEEECCCCeEEEEEEeee
Confidence 356999999999999999876322 12221 12444444333 23444443 789999999986
Q ss_pred ecC--CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 508 FFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 508 ~~~--~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A-~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
... ...++++ ++|+|+|||+|+|++|++.++++| ++.|++++.+.+ .++.+||+|+||+..+..
T Consensus 89 ~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 159 (184)
T 3igr_A 89 ITRFPFHAGHVG-YSLDSEYQGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPRNEKSAKVLAALGFVKEGEA 159 (184)
T ss_dssp EECTTTCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred cccccCceEEEE-EEEChhhccCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCEeeeee
Confidence 543 3567885 899999999999999999999999 668999999988 379999999999998865
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=119.46 Aligned_cols=130 Identities=20% Similarity=0.156 Sum_probs=97.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH--hhcCeEEEEE-ECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~--~~i~~~~V~~-~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
.||+++..|.+++.++......... +... ......+++. .++++||++.+.. ....++|..++|+|+||
T Consensus 17 ~ir~~~~~d~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~p~~r 88 (152)
T 2g3a_A 17 NFVLSDVADAEAEKAIRDPLVAYNL------ARFGESDKRDLNITIRNDDNSVTGGLVGHT--ARGWLYVQLLFVPEAMR 88 (152)
T ss_dssp CCCCCCSCCHHHHHHHHHHHHHHHH------HHHCCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEECCGGGC
T ss_pred eEEEecCCCHHHHHHHHHHHHHhhh------hhcCCCCccceEEEEEeCCCeEEEEEEEEE--eCCEEEEEEEEECHHHc
Confidence 5899999999988888765433110 0000 1112233444 4899999998885 45789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeec
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
|+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+.... | ......++|+|-
T Consensus 89 g~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~~-------~-~~~~~~~~m~k~ 151 (152)
T 2g3a_A 89 GQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLGP-------L-SSGQSITWLEKR 151 (152)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEEECC-------C-TTSCCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEecCccHHHHHHHCCCEEeeeccC-------C-CCCcEEEEEEec
Confidence 9999999999999999999999999998 47899999999999876531 2 233466777653
|
| >3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.9e-13 Score=123.01 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=94.1
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc-----------CeEEEEE--ECCEEEEEEEEEEecC----
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFK---- 510 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i-----------~~~~V~~--~dg~IVG~~~l~~~~~---- 510 (609)
...||+++++|++.+.++ ..........+++.+....++ ..+|++. .++++||++.+.+...
T Consensus 15 ~l~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~ 93 (175)
T 3juw_A 15 RLVLEPQSMARFDQWFAM-ERQRDEAGHRDLTEDQAWLRLCARQGMWDAYACGFYYLLDPVSGEMRGEAGFQFRRRGFGP 93 (175)
T ss_dssp SCEEEECCGGGHHHHHHH-HHHSCSTTTTTCCHHHHHHHHHHHHHHHHHHSCCEEEEECTTTCCEEEEEEEECCCCSSCT
T ss_pred ceEecCCCHHHHHHHHHH-HHHHHhcCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEEECCCCcEEEEeeeEEeeccccC
Confidence 357999999999999999 221111111345555443332 2345554 3799999999986321
Q ss_pred --CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 511 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 511 --~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
....++ .++|+|+|||+|+|++|++.++++|++. |++++.+.+ .++.+||+|+||+..+.....
T Consensus 94 ~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 164 (175)
T 3juw_A 94 GFDNHPEA-AWAVASAHQGRGLAAEAMQALLAHHDRSSGRQRVVALIARSNLPSLRLAERLGFRGYSDVAFD 164 (175)
T ss_dssp TTTTSCEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHHTSCCEEEEEETTCHHHHHHHHHTTCEEEEEEEET
T ss_pred CCCCCceE-EEEECHHHhCCCHHHHHHHHHHHHHHhCCCCceEEEEECCCChhHHHHHHHcCCeEecceeeC
Confidence 245677 5899999999999999999999999985 999999988 379999999999999886543
|
| >3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=121.20 Aligned_cols=124 Identities=18% Similarity=0.184 Sum_probs=95.6
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC--cc-CCHHHHHhhc--------CeEEEEE-ECCEEEEEEEEEEecC-CCeE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL--------DSFYVVE-REGQIIACAALFPFFK-EKCG 514 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~--~~-~~~e~l~~~i--------~~~~V~~-~dg~IVG~~~l~~~~~-~~~~ 514 (609)
...||+++++|++.+.++.++.....+. .+ .+.+....++ ..+|++. .++++||++.+.+... ...+
T Consensus 6 ~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 85 (170)
T 3tth_A 6 KIRLSALEREDLKFVHELNNNLSIMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRRC 85 (170)
T ss_dssp CCEEEECCGGGHHHHHHHHTC--CCEEETTEEECSHHHHHHHHHHHTTCCSCEEEEEECTTCCEEEEEEEEEEETTTTEE
T ss_pred cEEEeeCCHHHHHHHHHHHcCHHHHHhhccCCcccHHHHHHHHHhhccCCCccEEEEEcCCCCEEEEEEEEecccccceE
Confidence 3579999999999999997764433221 11 2334433332 3567777 7899999999876443 4577
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++ .++|+|+|||+|+|++|++.++++|++. |++++.+.+ .++.+||+|+||+..+..
T Consensus 86 ~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~g~~ 147 (170)
T 3tth_A 86 EF-AIIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKL 147 (170)
T ss_dssp EE-EEEECTTSCSSCSHHHHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred EE-EEEECccccCCCHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHCCCeEEEEE
Confidence 77 6899999999999999999999999764 999999988 379999999999998864
|
| >2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=122.26 Aligned_cols=140 Identities=18% Similarity=0.120 Sum_probs=100.0
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc-----c--CccCCH----HHHHh-------hcCeEEEEEE-CCEEEEEEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG-----A--LVRRTD----EELLK-------ALDSFYVVER-EGQIIACAALFP 507 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~-----~--~~~~~~----e~l~~-------~i~~~~V~~~-dg~IVG~~~l~~ 507 (609)
|...||+++.+|++.+.+++....... . ...... +.+.. ....+++++. +|++||++.+.+
T Consensus 2 M~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~ 81 (204)
T 2qec_A 2 MSPTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWDR 81 (204)
T ss_dssp CCCEEEECCGGGHHHHHHHHHHHHTTCHHHHTTSCSCCGGGHHHHHHHHHHHHHTHHHHEEEEEEECTTSCEEEEEEEEC
T ss_pred CccEEecCCHHHHHHHHHHHHHHhhcChhhEEEeCCCchhHHHHHHHHHHHHhhhcccCceEEEEECCCCCEEEEEEEeC
Confidence 456799999999999999986543221 1 111111 11111 1235788888 899999999874
Q ss_pred ec--------------------------------------CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCE
Q 007275 508 FF--------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549 (609)
Q Consensus 508 ~~--------------------------------------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~ 549 (609)
.. ....++|..++|+|+|||+|+|++|++.+++++++. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~---~ 158 (204)
T 2qec_A 82 PDGNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDE---A 158 (204)
T ss_dssp CC------------CCHHHHHC-CCC---------CTTSCSSCCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTS---C
T ss_pred CCCCcchhHHHhhhhHHHHHhCccHHHHHHHHHHHHhhCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHhhhC---C
Confidence 22 234678999999999999999999999999999887 5
Q ss_pred EEEEe--HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCC
Q 007275 550 LFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 597 (609)
Q Consensus 550 I~l~t--~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~ 597 (609)
+++.+ ..+.+||+|+||+.++...++ ......+.|.+-+.
T Consensus 159 ~~v~~~n~~a~~~y~k~GF~~~~~~~~~--------~~~~~~~~m~~~~~ 200 (204)
T 2qec_A 159 IYLEATSTRAAQLYNRLGFVPLGYIPSD--------DDGTPELAMWKPPA 200 (204)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEECCS--------SCSSCEEEEEECCC
T ss_pred eEEEecCccchHHHHhcCCeEeEEEEcC--------CCCeEEEEEEeCCC
Confidence 66665 479999999999999877543 12234566665443
|
| >1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-12 Score=119.13 Aligned_cols=125 Identities=10% Similarity=0.065 Sum_probs=93.6
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhh-----ccC-ccCCHH----HHHh-------hcCeEEEEEECCEEEEEEEEEEec
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVES-----GAL-VRRTDE----ELLK-------ALDSFYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~-----~~~-~~~~~e----~l~~-------~i~~~~V~~~dg~IVG~~~l~~~~ 509 (609)
+...||+++++|++.+.+++...... .+. .+.+.+ .+.. ....++++..++++||++.+.+..
T Consensus 12 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~ 91 (182)
T 1s7k_A 12 TTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIE 91 (182)
T ss_dssp SSEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEEE
T ss_pred CcEEEEECCHHHHHHHHHHHHhCHHHhhccCCCccccCCHHHHHHHHHHHHHHHhcCCceEEEEEECCEEEEEEEEEEcc
Confidence 44579999999999999998642211 110 111221 1221 124678888999999999998654
Q ss_pred C-CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 K-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 ~-~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
. ...++|. ++|+|+|||+|+|++|++.++++|++ .|++.+.+.+ .++.+||+|+||+..+..
T Consensus 92 ~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 159 (182)
T 1s7k_A 92 PINKAAYIG-YWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCM 159 (182)
T ss_dssp TTTTEEEEE-EEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCceEEEE-EEECHhhcCCCHHHHHHHHHHHHHHhhCCccEEEEEecCCCHHHHHHHHHCCCEEEeee
Confidence 3 4567884 79999999999999999999999987 8999999988 378999999999998765
|
| >2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=125.89 Aligned_cols=124 Identities=10% Similarity=0.008 Sum_probs=96.4
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC-ccCCHHHHHhhc-----------CeEEEEE--ECCEEEEEEEEEEecCCCe
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKC 513 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i-----------~~~~V~~--~dg~IVG~~~l~~~~~~~~ 513 (609)
...||+++++|++.+.+++++... .+. .+++.++...++ ..+|++. .++++||++.+........
T Consensus 34 ~l~iR~~~~~D~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~iG~~~~~~~~~~~~ 112 (195)
T 2fsr_A 34 RLTLRPLAMADFPAYRDFMASPRS-TGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPE 112 (195)
T ss_dssp SEEEECCCGGGHHHHHHHHHSGGG-GGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSS
T ss_pred cEEEEcCCHHHHHHHHHHHcCCCc-eecCCCCCHHHHHHHHHHHHhccccCCceEEEEEECCCCCEEEEEeeEecCCCCe
Confidence 357999999999999999876544 332 234433322211 2345554 4799999999985544567
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
++| .++|+|+|||+|+|++|++.++++|++ .|++++.+.+ .++.+||+|+||+..+...
T Consensus 113 ~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~ 176 (195)
T 2fsr_A 113 KEL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAP 176 (195)
T ss_dssp CEE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTSC
T ss_pred EEE-EEEEChhHcCCChHHHHHHHHHHHHHhhCCccEEEEEECCCCHHHHHHHHHCCCEEEeeec
Confidence 888 789999999999999999999999988 6999999988 3789999999999987653
|
| >3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-12 Score=121.64 Aligned_cols=123 Identities=19% Similarity=0.236 Sum_probs=95.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccC--cc-CCHHHHHhhc--------CeEEEEE-ECCEEEEEEEEEEecC-CCeEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL--------DSFYVVE-REGQIIACAALFPFFK-EKCGE 515 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~--~~-~~~e~l~~~i--------~~~~V~~-~dg~IVG~~~l~~~~~-~~~~e 515 (609)
+.||+++++|++.+.++++......+. .+ .+.+....++ ..+|++. .++++||++.+.+... ...++
T Consensus 8 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 87 (176)
T 3eg7_A 8 LTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAE 87 (176)
T ss_dssp CEEEECCGGGHHHHHHHHTTTCSCEEETTEEECSHHHHHHHHHHSTTCTTCEEEEEECTTCCEEEEEEEEEEETTTTEEE
T ss_pred EEEeeCCHHHHHHHHHHHcCHHHHhhhccccccCHHHHHHHHHHHhcCCCccEEEEEecCCCEEEEEEEEecCcccCceE
Confidence 579999999999999998654322211 12 2333333322 3577777 7899999999986443 45677
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+ .++|+|+|||+|+|++|++.++++|++. |++.+.+.+ .++.+||+++||+..+..
T Consensus 88 ~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 148 (176)
T 3eg7_A 88 F-QIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHL 148 (176)
T ss_dssp E-EEEECGGGTTSSCHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred E-EEEECHHHhCCCHHHHHHHHHHHHHHHhCCccEEEEEehhcCHHHHHHHHHCCCEEeeee
Confidence 7 4999999999999999999999999885 999999988 378999999999998764
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-12 Score=119.40 Aligned_cols=144 Identities=14% Similarity=0.233 Sum_probs=100.3
Q ss_pred ccccCCcCCHHHHHHHHhh---hHhhccCccCCHHHHHhhc-----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~---~~~~~~~~~~~~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV 521 (609)
++|.++.++.+.....+.. ..... ...++.+.+...+ ..+++++.++++||++.+.+.......+|..++|
T Consensus 2 ~~r~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v 80 (160)
T 1qst_A 2 DFDILTNDGTHRNMKLLIDLKNIFSRQ-LPKMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (160)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHH-CTTSCHHHHHHHHTSSSEEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred ceEEecCCcchHHHHHHHHHHHHhhhh-cchhHHHHHHHHhhCCCCceEEEEecCCEEEEEEEEEEecCCCeEEEEEEEE
Confidence 4677776665555444432 12222 2334555444332 2456666788999999998766666789999999
Q ss_pred cccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 522 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 522 ~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
+|+|||+|+|++||+.+++++++.|++.+.+.. +.+.+||+++||+..+... ......|.......++|.+.+
T Consensus 81 ~~~~rg~Gig~~ll~~~~~~~~~~g~~~l~~~~~n~a~~~y~k~Gf~~~~~~~--~~~~~~~~~~~~~~~~m~~~l 154 (160)
T 1qst_A 81 TANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHRMP--QEKWKGYIKDYDGGTLMECYI 154 (160)
T ss_dssp CGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHTTCBSSCSSC--HHHHTTTSCCCSSSEEEEEEC
T ss_pred CHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEeCcchhHHHHHHCCCEEeeeec--cccceeEEecCCCceEEeeec
Confidence 999999999999999999999999999887655 4689999999999876543 222233333334566666555
|
| >3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-12 Score=120.72 Aligned_cols=124 Identities=13% Similarity=0.090 Sum_probs=94.7
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccC--ccCC--HHHHHhh-c----C-eEEEEE---ECCEEEEEEEEEEecCCCe
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRT--DEELLKA-L----D-SFYVVE---REGQIIACAALFPFFKEKC 513 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~--~~~~--~e~l~~~-i----~-~~~V~~---~dg~IVG~~~l~~~~~~~~ 513 (609)
....||+++++|++.+.+++.+.....+. .+.+ .+.+... + . .++++. .++++||++.+.+.....
T Consensus 12 ~~i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~- 90 (164)
T 3eo4_A 12 SKIIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQLNTDN- 90 (164)
T ss_dssp CEEEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEECTTSSS-
T ss_pred CcEEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEecCCCc-
Confidence 33579999999999999998654332221 1112 3344333 1 2 344444 578999999998654444
Q ss_pred EEEEEEEEcc-cCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 514 GEVAAIGVSP-ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 514 ~eI~~iaV~p-~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+++ .++|.| +|||+|+|++|++.++++|++.|++++.+.+ .++.+||+|+||+.++..
T Consensus 91 ~~i-~~~v~~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 153 (164)
T 3eo4_A 91 PEI-GILIGEFFLWGKHIGRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKKG 153 (164)
T ss_dssp CEE-EEEECSTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred EEE-EEEEcCHHHcCccHHHHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeee
Confidence 777 789998 9999999999999999999999999999988 379999999999998765
|
| >3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.1e-12 Score=117.89 Aligned_cols=125 Identities=6% Similarity=0.005 Sum_probs=97.9
Q ss_pred cccccccCCcCCHHHHHHHHhh--hHhhccC---cc-CCHHHHHhhc-----------CeEEEEEECCEEEEEEEEEEec
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQP--LVESGAL---VR-RTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~--~~~~~~~---~~-~~~e~l~~~i-----------~~~~V~~~dg~IVG~~~l~~~~ 509 (609)
....||+++++|++.+.+++.. .....+. .. .+.+....++ ..+|++..++++||++.+.+..
T Consensus 20 ~~l~lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~ 99 (188)
T 3r9f_A 20 DEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIID 99 (188)
T ss_dssp SSEEEECCCGGGHHHHHHHHHHHHHHHHTTCSGGGGCCSHHHHHHHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEE
T ss_pred CcEEEEeCCHHHHHHHHHHHhcChHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhhccCeEEEEEEECCEEEEEEEEEEec
Confidence 3457999999999999999875 2222221 11 3444444333 3467888899999999998543
Q ss_pred -CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 -~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
....++|+ ++|+|+|||+|+|++|++.++++|.+. |++++.+.+ .++.+||+|+||+..+..
T Consensus 100 ~~~~~~~i~-~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 167 (188)
T 3r9f_A 100 HANKTAYIG-YWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVL 167 (188)
T ss_dssp TTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHTTTSCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEE-EEEChhhcCCCHHHHHHHHHHHHHHHhcCeEEEEEEecCCCHHHHHHHHHCCCeEEeEe
Confidence 35678885 689999999999999999999999876 999999988 378999999999998765
|
| >4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-12 Score=126.68 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=94.9
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc--------cC-ccCCHHHHHh----hc--CeEEEEEE-CCEEEEEEEEEEec--
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG--------AL-VRRTDEELLK----AL--DSFYVVER-EGQIIACAALFPFF-- 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~--------~~-~~~~~e~l~~----~i--~~~~V~~~-dg~IVG~~~l~~~~-- 509 (609)
.+.||+++++|++.+.+++....... .. .+...+.+.. .+ ...+++.+ +|+|||++...+..
T Consensus 8 ~~~iR~a~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~ 87 (222)
T 4fd5_A 8 NIRFETISSKYYDDVIEHLRQTFFADEPLNKAVNLTRPGQGHPLLEQHSLSTLKDNVSIMAISNDGDIAGVALNGILYGN 87 (222)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHTTTTSHHHHHTTCCCTTTCCHHHHHHHHHHHTTSCCEEEECTTSCEEEEEEEEEEETT
T ss_pred CEEEEECCHHHHHHHHHHHHHhcCCCCccchhhcccCCCcccHHHHHHHHHHHhCCcEEEEEeCCCCEEEEEEeccccCC
Confidence 45799999999999999986633111 11 1111222222 22 23455544 89999999876533
Q ss_pred ---------------------------------------CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 007275 510 ---------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550 (609)
Q Consensus 510 ---------------------------------------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I 550 (609)
.+..++|..++|+|+|||+|+|++|++.++++|++.|+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~~ 167 (222)
T 4fd5_A 88 TDIEKSREKLNEIQDESFKKIFKLLYEQNLKINLFKQFDVDKIFEIRILSVDSRFRGKGLAKKLIEKSEELALDRGFQVM 167 (222)
T ss_dssp SCTTHHHHHHHHCCCHHHHHHHHHHHHHHTTCCHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHHHhhccChhHHHHHHHHHHHHhhcchhhhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEE
Confidence 03467899999999999999999999999999999999988
Q ss_pred EEEe--HHHHHHHHHCCCeEeeeecch
Q 007275 551 FLLT--TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 551 ~l~t--~~a~~fYek~GF~~~~~~~lp 575 (609)
.+.+ ..+.+||+++||+..+...+.
T Consensus 168 ~~~~~~~~~~~~y~~~Gf~~~~~~~~~ 194 (222)
T 4fd5_A 168 KTDATGAFSQRVVSSLGFITKCEINYT 194 (222)
T ss_dssp EEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEEchh
Confidence 7776 478999999999999876544
|
| >3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.2e-12 Score=124.41 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=93.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc--c----CccCC--HHHH-Hhhc--CeEEEE-EECCEEEEEEEEEEec-----
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG--A----LVRRT--DEEL-LKAL--DSFYVV-EREGQIIACAALFPFF----- 509 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~--~----~~~~~--~e~l-~~~i--~~~~V~-~~dg~IVG~~~l~~~~----- 509 (609)
+.+.||+++++|++.+.+++...+... + ..... .+.+ ...+ ...+++ +.+|+|||++...+..
T Consensus 5 ~~~~iR~a~~~D~~~i~~~~~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~~~ 84 (215)
T 3te4_A 5 SPYTIELIQPEDGEAVIAMLKTFFFKDEPLNTFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPD 84 (215)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTCCSCHHHHHHHHTTGGGSCCEEEEETTSCEEEEEEEEEEECCCTT
T ss_pred CcEEEEECCHHHHHHHHHHHHHhcCCCCCchhhcCCCCchHHHHHHHHHHhCCcEEEEEcCCCcEEEEEecccccCcchh
Confidence 456799999999999999876533111 1 01111 1111 1112 234444 4689999998765321
Q ss_pred ------------------------------------CCC-eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 007275 510 ------------------------------------KEK-CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552 (609)
Q Consensus 510 ------------------------------------~~~-~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l 552 (609)
..+ ..+|..++|+|+|||||+|++|++.+++++++.|++.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~ 164 (215)
T 3te4_A 85 DVPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHV 164 (215)
T ss_dssp CCCCCGGGGCCCHHHHHHHHHHHHHHHHCCHHHHCTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHhhccCccHHHHHHHHHHHhhccCHHHhCCCCCeEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 112 7899999999999999999999999999999999999988
Q ss_pred EeH--HHHHHHHHCCCeEeeeecch
Q 007275 553 LTT--RTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 553 ~t~--~a~~fYek~GF~~~~~~~lp 575 (609)
.++ .+.+||+++||+.++...+.
T Consensus 165 ~~~~~~~~~~y~~~Gf~~~~~~~~~ 189 (215)
T 3te4_A 165 LCSSHYSARVMEKLGFHEVFRMQFA 189 (215)
T ss_dssp EESSHHHHHHHHHTTCEEEEEECGG
T ss_pred EecCHHHHHHHHHCCCEEEEEEEhh
Confidence 874 78999999999998876543
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.8e-12 Score=131.02 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=97.9
Q ss_pred cccccccccCCcCCHHHHHHHHhhhHhhccCccCCHH-------HHHh-hcCeEEEEEECCEEEEEEEEEEecCCCeEEE
Q 007275 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------ELLK-ALDSFYVVEREGQIIACAALFPFFKEKCGEV 516 (609)
Q Consensus 445 ~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e-------~l~~-~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI 516 (609)
..+...||+++++|++.+.+|... ...+ ++..+ .+.. ....+++++.++++||++.+.+.. ..++|
T Consensus 16 ~~~~~~iR~~~~~D~~~i~~l~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~--~~~~i 89 (288)
T 3ddd_A 16 YFQGMIIRYATPDDIEDMVSIFID--AYNF--PGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFFYN--KQAWI 89 (288)
T ss_dssp CSTTCEEEECCGGGHHHHHHHHHH--HHTC--CSCHHHHHHHHHHHHHHCTTCEEEEEETTEEEEEEEEEECS--SEEEE
T ss_pred CCCCcEEEECCHHHHHHHHHHHHh--ccCC--CCchhhhHHHHHHHHhCCCCEEEEEEECCEEEEEEEEEEEC--CEEEE
Confidence 455668999999999999999774 2233 22222 1111 225678899999999999998654 78999
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~ 572 (609)
..++|+|+|||||+|++||+.++++++ .|++.+.+.++ .+.+||+|+||+..+..
T Consensus 90 ~~~~V~p~~rg~Gig~~Ll~~~~~~~~-~~~~~~~l~~n~~a~~~y~k~Gf~~~~~~ 145 (288)
T 3ddd_A 90 GLMGVKKAYQRRGIGTEVFRRLLEIGR-RKVDTIRLDASSQGYGLYKKFKFVDEYRT 145 (288)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHHHHHH-HHCSEEEEEECTTTHHHHHHTTCEEEEEE
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHH-cCCcEEEEEeCHHHHHHHHHCCCEEeceE
Confidence 999999999999999999999999999 88999999884 78999999999987654
|
| >1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=5.5e-12 Score=117.44 Aligned_cols=125 Identities=13% Similarity=0.078 Sum_probs=96.3
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhh--ccC----ccCCHHHHHh-hc-----------CeEEEEEECCEEEEEEEEEEec
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVES--GAL----VRRTDEELLK-AL-----------DSFYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~--~~~----~~~~~e~l~~-~i-----------~~~~V~~~dg~IVG~~~l~~~~ 509 (609)
...||+++++|++.+.++++..... .+. .+.+.+.... ++ ..+|++..++++||++.+.+..
T Consensus 10 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~ 89 (184)
T 1nsl_A 10 HITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLD 89 (184)
T ss_dssp SEEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHcCHHHHhhcccccCCCCCHHHHHHHHHHHHHHhhhccCceEEEEEECCEEEEEEEEEecc
Confidence 3579999999999999998763211 111 1234444333 22 4578888899999999998644
Q ss_pred C-CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 510 K-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 510 ~-~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
. ...+++ .++|+|+|||+|+|++|++.++++|. +.|++.+.+.+ .++.+||+|+||+..+...
T Consensus 90 ~~~~~~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~ 158 (184)
T 1nsl_A 90 QVNRKAEI-GYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKAR 158 (184)
T ss_dssp TTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEEE
T ss_pred cccCeEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHhcCcEEEEEEEecCCHHHHHHHHHcCCEEEEEee
Confidence 3 456778 46999999999999999999999995 58999999988 3789999999999987653
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.5e-13 Score=127.30 Aligned_cols=121 Identities=17% Similarity=0.225 Sum_probs=95.0
Q ss_pred cccccCCcCCHHH-HHHHHhhhHhhccCccCCHHHHHhhc---------CeEEEEE-ECCEEEEEEEEEEec-----CCC
Q 007275 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVE-REGQIIACAALFPFF-----KEK 512 (609)
Q Consensus 449 ~~IR~a~~~D~~~-I~~L~~~~~~~~~~~~~~~e~l~~~i---------~~~~V~~-~dg~IVG~~~l~~~~-----~~~ 512 (609)
..||+++.+|++. +.++++..... .+++.+.+...+ ..++++. .+|++||++.+.... ...
T Consensus 48 ~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~ 124 (190)
T 2vez_A 48 YTIRPLCRSDYKRGYLDVLRVLTTV---GDINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGM 124 (190)
T ss_dssp CEEEECCGGGGGGTHHHHHTTTSCC---CCCCHHHHHHHHHHHHTTTTTEEEEEEECTTSCEEEEEEEEEEECSHHHHCE
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhcc---cCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCcEEEEEEEEeccccccCCCc
Confidence 5699999999999 99997654322 234444443321 2355666 479999999998532 346
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
.++|..++|+|+|||||+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 125 ~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 185 (190)
T 2vez_A 125 VGHIEDIAVEKGQQGKKLGLRIIQALDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLE 185 (190)
T ss_dssp EEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEECCCCGGGHHHHHHTTCCCCCCC
T ss_pred eEEEEEEEEchhhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeccchHHHHHHCCCeehHHh
Confidence 789999999999999999999999999999999999999987 356799999999987654
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.1e-13 Score=126.11 Aligned_cols=125 Identities=14% Similarity=0.057 Sum_probs=94.6
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHH-HHhhcCeEEEEEE-CCEEEEEEEEEEec-CCCeEEEEEEEEcc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-LLKALDSFYVVER-EGQIIACAALFPFF-KEKCGEVAAIGVSP 523 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~-l~~~i~~~~V~~~-dg~IVG~~~l~~~~-~~~~~eI~~iaV~p 523 (609)
+...||+++.+|++.+.++++..........+.... .......+++++. +|++||++.+.... .....+|..++|+|
T Consensus 25 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~i~~l~V~p 104 (189)
T 3d3s_A 25 LRYHLRPPRRNDGAAIHQLVSECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYLLPTRPDVLFVWQVAVHS 104 (189)
T ss_dssp -CCEEECCCGGGHHHHHHHHHTSTTSCCCCHHHHHHHHHHCGGGCEEEECTTSCEEEEEEEEECSSCTTEEEEEEEEECG
T ss_pred CCEEEEECChhHHHHHHHHHHHccccCchhhHHHHHhccCCCceEEEEECCCCEEEEEEEEEEcCCCCCceEEEEEEECH
Confidence 345799999999999999987642111111111111 1111245678888 89999999988653 34668999999999
Q ss_pred cCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 524 ~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
+|||+|+|++||+.+++++++.|++.+.+.+ ..+.+||+++||+..+.
T Consensus 105 ~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~Gf~~~~~ 156 (189)
T 3d3s_A 105 RARGHRLGRAMLGHILERQECRHVRHLETTVGPDNQASRRTFAGLAGERGAH 156 (189)
T ss_dssp GGTTSCHHHHHHHHHHHSGGGTTCCEEEEEECTTCHHHHHHHHHHHHTTTCE
T ss_pred HHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccc
Confidence 9999999999999999999999999999988 37899999999986543
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.9e-12 Score=131.13 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=95.3
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEe--cCCCeEEEEEEEEc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPF--FKEKCGEVAAIGVS 522 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~--~~~~~~eI~~iaV~ 522 (609)
....||+++++|++.+.+++...... ...|....+...+ ..+|+++.++++||++.+.+. .....+++ .++|+
T Consensus 139 ~~i~IR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~g~iVG~~~~~~~~~~~~~~~~~-~l~V~ 215 (276)
T 3iwg_A 139 EMIDMQIAGTEQLTAFVTFAAANIGA--PEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQYQTEYADL-GMIVA 215 (276)
T ss_dssp CCCCCEECCGGGHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSCTTEEEE-EEEEC
T ss_pred CceEEEECCHHHHHHHHHHHHHhhcC--cHHHHHHHHHhhccCCeEEEEEECCEEEEEEEEEeccccCCcceEE-EEEEC
Confidence 34579999999999999998775544 2222222222222 568889999999999997652 23344555 59999
Q ss_pred ccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 523 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|+|||+|+|++||+.++++|++.|++.+. .| ..+.+||+|+||+..+..
T Consensus 216 p~~RGkGiG~~Ll~~l~~~a~~~g~~~i~-~v~~~N~~A~~~YeklGF~~~~~l 268 (276)
T 3iwg_A 216 QSNRGQGIAKKVLTFLTKHAATQGLTSIC-STESNNVAAQKAIAHAGFTSAHRI 268 (276)
T ss_dssp GGGTTSSHHHHHHHHHHHHHHHTTCEEEE-EEETTCHHHHHHHHHTTEEEEEEE
T ss_pred HHHcCCCHHHHHHHHHHHHHHHcCCCEEE-EEccCCHHHHHHHHHCCCEEeeEE
Confidence 99999999999999999999999999998 66 379999999999998754
|
| >1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=7e-12 Score=119.04 Aligned_cols=124 Identities=12% Similarity=0.038 Sum_probs=95.3
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC---ccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEec-CCCeEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFF-KEKCGEV 516 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~-~~~~~eI 516 (609)
...||+++++|++.+ ++++......+. .+...+.+.... ...|++..++++||++.+.+.. ....++|
T Consensus 21 ~i~lr~~~~~D~~~l-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~~~~~~~i 99 (197)
T 1yre_A 21 ALRLEPLVEADIPEL-VSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEI 99 (197)
T ss_dssp TEEEEECCGGGHHHH-HHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred cEEEecCChhhHHHH-HhhcChhhhhccCCCchhHHHHHHHHHHhhccCCeEEEEEEECCeEEEEEEEEeecCCcCeeEE
Confidence 357999999999999 998654322221 111222222211 2356666899999999997543 3467899
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+.++|+|+|||+|+|++|++.++++|++ .|++.+.+.+ .++.+||+|+||+..+..
T Consensus 100 ~~l~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 160 (197)
T 1yre_A 100 GWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVL 160 (197)
T ss_dssp EEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEEECHhHhcCCHHHHHHHHHHHHHHhhcCccEEEEEEcCCCHHHHHHHHHcCCeeeeee
Confidence 8889999999999999999999999998 7999999988 378999999999998765
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} | Back alignment and structure |
|---|
Probab=99.38 E-value=9.8e-13 Score=124.39 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=89.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc-CccC-C------HHHHH----hhc--CeEEE-EEECCEEEEEEEEEEe-----
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRR-T------DEELL----KAL--DSFYV-VEREGQIIACAALFPF----- 508 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~-~~~~-~------~e~l~----~~i--~~~~V-~~~dg~IVG~~~l~~~----- 508 (609)
..||+++++|++.+.+++........ ...+ . .+.+. ..+ ...++ ++.++++||++...+.
T Consensus 2 ~~ir~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ivG~~~~~~~~~~~~ 81 (197)
T 3qb8_A 2 YTLIKLTSEYTSRAISFTSRNFVASEPTSIALKLTTCDFTTSFQNIMKQCVDYGHSFAFVDADDNIKAQILNIPYDAYEN 81 (197)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEECTTCCEEEEEEEEEHHHHHT
T ss_pred cEEEECCHHHHHHHHHHHHHhccccCcHHHHhCCCcchHHHHHHHHHHHHHhcCceEEEEcCCCCEEEEEEecCCcccch
Confidence 46999999999999998754321111 0000 0 11111 111 33455 4678999999554432
Q ss_pred --c---CCCe-------------EEEE---EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCC
Q 007275 509 --F---KEKC-------------GEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRG 565 (609)
Q Consensus 509 --~---~~~~-------------~eI~---~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~G 565 (609)
. .... .+|. .++|+|+|||||+|++||+.++++|++.|+..+.+.+ ..+.+||+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~~y~k~G 161 (197)
T 3qb8_A 82 MHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHG 161 (197)
T ss_dssp CCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHCC
Confidence 0 0111 5555 8999999999999999999999999999999999988 47899999999
Q ss_pred CeEeeeec
Q 007275 566 FRECSIEM 573 (609)
Q Consensus 566 F~~~~~~~ 573 (609)
|+..+...
T Consensus 162 F~~~~~~~ 169 (197)
T 3qb8_A 162 FETVGSVK 169 (197)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 99998765
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=122.03 Aligned_cols=119 Identities=18% Similarity=0.195 Sum_probs=88.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhh-ccCccCCHHHHHhhc-----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV 521 (609)
++.||+++.+|.+.+.++.+..... ........+.+...+ ..+++++.++++||++.+... .+.++|..++|
T Consensus 4 ~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~V 81 (181)
T 3ey5_A 4 MIRFQPITTSDVQHYKFMEELLVESFPPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWDF--DEFYYVEHFAT 81 (181)
T ss_dssp -CEEEECCTTSHHHHHHHHHHHHHHSCGGGSCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC--SSCEEEEEEEE
T ss_pred ceEEEECccccHHHHHHHHHHHHHhCCccccchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEEEc--CCeEEEEEEEE
Confidence 3579999999998877766543222 111222333333332 457888999999999999843 56899999999
Q ss_pred cccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--------HHHHHHHHHCCCeEeeee
Q 007275 522 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--------TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 522 ~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--------~~a~~fYek~GF~~~~~~ 572 (609)
+|+|||||+|++||+.++++|+ ..+.+.+ .++.+||+++||+..+..
T Consensus 82 ~p~~rg~GiG~~Ll~~~~~~a~----~~~~l~v~~~~~~~n~~a~~fY~k~GF~~~~~~ 136 (181)
T 3ey5_A 82 NPALRNGGYGKRTLEHLCEFLK----RPIVLEVERPVEEMAKRRINFYQRHGFTLWEKD 136 (181)
T ss_dssp CGGGTTSSHHHHHHHHHHHHCC----SCEEEEECCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred chhhcCCCHHHHHHHHHHHhhh----hCeEEEEeCCCccchHHHHHHHHHCCCEECCcc
Confidence 9999999999999999999998 2333433 257899999999999843
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-11 Score=115.77 Aligned_cols=145 Identities=12% Similarity=0.158 Sum_probs=98.8
Q ss_pred cccccCCcCCHHHHHHHHhh---hHhhccCccCCHHHHHhhc----C-eEEEEEECCEEEEEEEEEEecCCCeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL----D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~---~~~~~~~~~~~~e~l~~~i----~-~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~ia 520 (609)
++||+++.+|.+....++.. .....+ ...+.+.+...+ . .++++..++++||++.+.+.......++..++
T Consensus 2 i~~r~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~l~ 80 (164)
T 1ygh_A 2 IEFRVVNNDNTKENMMVLTGLKNIFQKQL-PKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCA 80 (164)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred eeEEEecCCCchhhHHHHHHHHHHHHhhc-ccCCHHHHHHHhhCCCceEEEEECCCCEEEEEEEEEEcCCCCceEEEEEE
Confidence 46888888887766655433 222223 223444443322 2 24667778999999999876555678899999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe-HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
|+|+|||+|+|++||+.+++++++ .|++.+.+.. +++.+||+++||+..+... ......+...-...++|.+-+
T Consensus 81 V~p~~rg~Gig~~ll~~~~~~a~~~~g~~~l~v~~~n~a~~~y~k~GF~~~~~~~--~~~~~~~~~~~~~~~~m~~~l 156 (164)
T 1ygh_A 81 ISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEITLD--KSIWMGYIKDYEGGTLMQCSM 156 (164)
T ss_dssp ECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCCSC--HHHHBTTBCCTTCCEEEEEEC
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEecCChHHHHHHHcCCEecceec--cceEEEEEEEecCeEEEEeec
Confidence 999999999999999999999998 8998555444 4789999999999876542 222222322233445554444
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-12 Score=115.22 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=88.0
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc--cCccCCHHHHHhhc------CeEEEEEEC-CEEEEEEEEEEecCCCeEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG--ALVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFKEKCGEVA 517 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~--~~~~~~~e~l~~~i------~~~~V~~~d-g~IVG~~~l~~~~~~~~~eI~ 517 (609)
|...||+++++|++.+.+++....... +..+...+.+...+ ..+++++.+ +++||++.+.+ .+|.
T Consensus 1 M~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~------~~i~ 74 (147)
T 2kcw_A 1 MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSG------QHMD 74 (147)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTTTTTSCCEEEEETTSCEEEEEEEET------TEEE
T ss_pred CeEEEecCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHhhCCCCcEEEEEcCCCCEEEEEEEec------ceec
Confidence 446799999999999999987654332 22222222222222 346788877 99999999872 5788
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCCCeEeeeecc
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~GF~~~~~~~l 574 (609)
.++|+|+|||+|+|++|++.++++++. -.+.+.. ..+.+||+|+||+..+....
T Consensus 75 ~~~v~p~~rg~Gig~~ll~~~~~~~~~---~~~~v~~~N~~a~~~y~k~Gf~~~~~~~~ 130 (147)
T 2kcw_A 75 ALFIDPDVRGCGVGRVLVEHALSMAPE---LTTNVNEQNEQAVGFYKKVGFKVTGRSEV 130 (147)
T ss_dssp EEEECHHHHTTTHHHHHHHHHHHHCTT---CEEEEETTCHHHHHHHHHHTEEEEEECSS
T ss_pred cEEECHHHhCCCHHHHHHHHHHHhccc---eEEEEecCChHHHHHHHHCCCEEeceeee
Confidence 999999999999999999999999843 2333333 47899999999999887643
|
| >3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.36 E-value=6e-12 Score=121.65 Aligned_cols=126 Identities=13% Similarity=0.072 Sum_probs=99.0
Q ss_pred cccccccCCcC-CHHHHHHHHhhhHh-hccC---ccCCHHHHHhhc--------CeEEEEEE--CCEEEEEEEEEEec-C
Q 007275 447 LYEGTRTAKVT-DLSGIKQIIQPLVE-SGAL---VRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF-K 510 (609)
Q Consensus 447 ~~~~IR~a~~~-D~~~I~~L~~~~~~-~~~~---~~~~~e~l~~~i--------~~~~V~~~--dg~IVG~~~l~~~~-~ 510 (609)
..+.||+++.+ |.+.+.+++..... ..+. ...+.+.+..++ ..+|++.. ++++||++.+.... .
T Consensus 37 ~~l~lr~~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~~ 116 (209)
T 3pzj_A 37 EAVSLQPLDAPRHGAALFRLFAGDDSHWEHLPYGPFEDEDAFITWLALTVAQSDTALYVVCAKDSDQALGFLGYRQMVQA 116 (209)
T ss_dssp SSEEEEECCHHHHHHHHHHHHHTCGGGGTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEEEEETTCCCCCEEEEEEEEEGG
T ss_pred CeEEEEECCcccCHHHHHHHHcCCHHHHhhCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEECCCCcEEEEEEeeeecCc
Confidence 34579999999 99999998775321 2221 223455554444 24566664 89999999997543 3
Q ss_pred CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 ~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...++|+.++|+|+|||+|+|++|++.++++|++.|+++|.+.+ .++.+||+|+||+..+..
T Consensus 117 ~~~~ei~~~~v~~~~~g~Gig~~ll~~l~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 182 (209)
T 3pzj_A 117 HGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFELGYRRCEWRCDSRNAASAAAARRFGFQFEGTL 182 (209)
T ss_dssp GTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred CCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHcCCcEEEEeecCCCHHHHHHHHHCCCEEeeee
Confidence 56799988889999999999999999999999999999999988 379999999999998765
|
| >2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=8.7e-12 Score=115.77 Aligned_cols=124 Identities=11% Similarity=0.040 Sum_probs=95.1
Q ss_pred ccccccCCcCCHHHHHHH-HhhhHhhccC----ccCCHHHHHhhc-----------CeEEEEEE--CCEEEEEEEEEEec
Q 007275 448 YEGTRTAKVTDLSGIKQI-IQPLVESGAL----VRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFF 509 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L-~~~~~~~~~~----~~~~~e~l~~~i-----------~~~~V~~~--dg~IVG~~~l~~~~ 509 (609)
...||+++++|++.+.++ .+......+. .+.+.+....++ ...|++.. ++++||++.+.+..
T Consensus 14 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~~ 93 (181)
T 2fck_A 14 RLQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFY 93 (181)
T ss_dssp SEEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred cEEEEECchhhHHHHHHHHhCCHhHhcccCcCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEEEECCCCcEEEEEEEEEec
Confidence 357999999999999999 6553322221 233444433332 34566665 89999999997543
Q ss_pred -CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 -~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
....++| .++|+|+|||+|+|++|++.++++|++. |++.+.+.+ .++.+||+|+||+..+..
T Consensus 94 ~~~~~~~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 161 (181)
T 2fck_A 94 HTFNMASL-GYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLA 161 (181)
T ss_dssp GGGTEEEE-EEEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred ccCCeEEE-EEEEChhhcCCChHHHHHHHHHHHHHHhcCceEEEEEEccCCHHHHHHHHHcCCEEEEEE
Confidence 3457788 6899999999999999999999999985 999999988 378999999999998764
|
| >2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=8.6e-12 Score=118.29 Aligned_cols=123 Identities=8% Similarity=-0.026 Sum_probs=94.9
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC---ccCCH-HHHHhhc--------CeEEEEEECCEEEEEEEEEEec-CCCeE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTD-EELLKAL--------DSFYVVEREGQIIACAALFPFF-KEKCG 514 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~---~~~~~-e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~-~~~~~ 514 (609)
...||+++++|++.+.++ .......+. .+.+. +....++ ..+|++..++++||++.+.+.. ....+
T Consensus 12 ~~~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~vG~~~~~~~~~~~~~~ 90 (194)
T 2z10_A 12 HVRLEPLALAHLPAFLRH-YDPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAPEPEHAKL 90 (194)
T ss_dssp SEEEEECCGGGHHHHHHT-CCHHHHTTSTTCCSSSSHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEEGGGTEE
T ss_pred eEEEeeCCHHHHHHHHHh-cCHHHHHhcCCCCCCChHHHHHHHHHHhhcCCCceEEEEecCCCEEEEEEecccCcccCEE
Confidence 357999999999999999 553332222 12332 3333332 3467778899999999997543 34578
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+|+.+.+ |+|||+|+|++|++.++++|++. |++.+.+.+ .++.+||+|+||+..+..
T Consensus 91 ~i~~~~~-p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 152 (194)
T 2z10_A 91 ELGTMLF-KPFWGSPANKEAKYLLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVL 152 (194)
T ss_dssp EEEEEEC-GGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEeeEEC-HhHhCCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCcEEEec
Confidence 8977666 99999999999999999999886 999999988 378999999999998765
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=6.9e-12 Score=117.60 Aligned_cols=118 Identities=25% Similarity=0.322 Sum_probs=92.6
Q ss_pred cccccCCcCCH-----HHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEec---CC---CeEE
Q 007275 449 EGTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF---KE---KCGE 515 (609)
Q Consensus 449 ~~IR~a~~~D~-----~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~---~~---~~~e 515 (609)
..||+++.+|+ +.+.++++... ......+.+...+ ..+++ +.++++||++.+.... .+ ..++
T Consensus 6 ~~ir~~~~~D~~~~~~~~i~~l~~~~~----~~~~~~~~~~~~~~~~~~~v-~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 80 (181)
T 1m4i_A 6 HTARLVHTADLDSETRQDIRQMVTGAF----AGDFTETDWEHTLGGMHALI-WHHGAIIAHAAVIQRRLIYRGNALRCGY 80 (181)
T ss_dssp TCCEEEEGGGCCHHHHHHHHHHHHHHT----TTCCCHHHHHHTCSSEEEEE-EETTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEECChHHcchhHHHHHHHHHHHHc----ccccCHHHHHhhcCCcEEEE-EECCEEEEEEEEEEeccccCCCCcceeE
Confidence 57999999999 88888876533 2234456666555 34667 8899999999997543 22 5678
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
|..++|+|+|||||+|++|++.+++++++ ++....+.. ..+.+||+|+||+..+..
T Consensus 81 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~l~~~~~n~~a~~~y~k~GF~~~~~~ 137 (181)
T 1m4i_A 81 VEGVAVRADWRGQRLVSALLDAVEQVMRG-AYQLGALSSSARARRLYASRGWLPWHGP 137 (181)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHH-HCSEEEEECCTTTHHHHHHTTCEECCSC
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHh-CcEEEEecCCHHHHHHHHhcCCEEcCCc
Confidence 99999999999999999999999999998 565544444 478999999999998754
|
| >1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.2e-12 Score=123.38 Aligned_cols=127 Identities=13% Similarity=-0.021 Sum_probs=94.6
Q ss_pred cccccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEecC-------
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK------- 510 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~~------- 510 (609)
+...||+++.+|++.|..+.++... ..+..+++.+....++ ..+++++.++++||++.+.....
T Consensus 41 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~iG~~~l~~~~~~~~~~~~ 120 (210)
T 1yk3_A 41 PPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYY 120 (210)
T ss_dssp TTEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSS
T ss_pred CcEEEEECCHHHHHHHHHHHcChHHHHHhCCCCCHHHHHHHHHHhhcCCcceEEEEEECCEEEEEEEEEccccccccccc
Confidence 3457999999999999999865432 2222345555544333 23677788999999999874211
Q ss_pred ---CCeEEEEEEEEc-ccCcCCcHHHHHHHHHHHHHHH--CCCCEEEEEe----HHHHHHHHHCCCeEeeeecc
Q 007275 511 ---EKCGEVAAIGVS-PECRGQGQGDKLLDYIEKKAAS--LGLDMLFLLT----TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 511 ---~~~~eI~~iaV~-p~~RgqGiG~~LL~~l~~~A~~--~G~~~I~l~t----~~a~~fYek~GF~~~~~~~l 574 (609)
.....+ .++|. |+|||||+|++||+.++++|++ .|+++|.+.+ .++++||+|+||+..+....
T Consensus 121 ~~~~~~~g~-~~~i~~p~~rGkGiG~~ll~~~~~~a~~~~~g~~~I~l~v~~~N~~A~~lyek~GF~~~g~~~~ 193 (210)
T 1yk3_A 121 DADPYDLGL-HAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDT 193 (210)
T ss_dssp CCCTTCEEE-EEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEEC
T ss_pred CCCCCceEE-EEEEEChhhcCCChHHHHHHHHHHHHHhcCCCCCEEEEecCccCHHHHHHHHHcCCEEeEEEeC
Confidence 111223 45665 9999999999999999999986 7999999988 47999999999999987654
|
| >2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.33 E-value=7.8e-12 Score=118.99 Aligned_cols=128 Identities=14% Similarity=0.060 Sum_probs=95.9
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc-cCccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEec--------C
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF--------K 510 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~--------~ 510 (609)
...||+++++|++.+.+++++..... +....+.+....++ ..+++++.++++||++.+.... .
T Consensus 21 ~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 100 (198)
T 2qml_A 21 KLSFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYYP 100 (198)
T ss_dssp EEEEEECCGGGHHHHHHHTTSTTTHHHHCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEGGGSGGGGGSC
T ss_pred cEEEEECCHHHHHHHHHHHcCcchhhhccCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEeccccccccccc
Confidence 35799999999999999976533211 11112444443332 2457788899999999997543 2
Q ss_pred CCeEEEE-EEEEc-ccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 511 EKCGEVA-AIGVS-PECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 511 ~~~~eI~-~iaV~-p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
...+++. .++|. |+|||||+|++|++.++++|.+ .|++++.+.+ .++.+||+|+||+..+....+
T Consensus 101 ~~~~~~~~~~~v~~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 172 (198)
T 2qml_A 101 FEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKFQEPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKEVELP 172 (198)
T ss_dssp CCTTCEEEEEEECSGGGSSSSTHHHHHHHHHHHHHTSTTCCEEEECCBTTCHHHHHHHHHTTCEEEEEEECS
T ss_pred CCCccEEEEEEEeCHHHcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHCCCEEEEEEecC
Confidence 3344554 47888 6999999999999999999987 4999999988 379999999999999876544
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=8.9e-12 Score=118.29 Aligned_cols=126 Identities=23% Similarity=0.291 Sum_probs=95.3
Q ss_pred ccccccc---CCcCCHHHHHHHHhhhHhhc----c----CccCCHHHH------------HhhcCeEEEEEECCEEEEEE
Q 007275 447 LYEGTRT---AKVTDLSGIKQIIQPLVESG----A----LVRRTDEEL------------LKALDSFYVVEREGQIIACA 503 (609)
Q Consensus 447 ~~~~IR~---a~~~D~~~I~~L~~~~~~~~----~----~~~~~~e~l------------~~~i~~~~V~~~dg~IVG~~ 503 (609)
|...||+ ++++|++.+.+++....... + ......+.+ ......+++++.++++||++
T Consensus 3 mi~~ir~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~ 82 (190)
T 2gan_A 3 GVKKIKNPSTVKDELLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLKFRLSQEFDELYTYQKDNRIIGTI 82 (190)
T ss_dssp EEEECSSGGGGHHHHHHHHHHHHHHTTTCSSCCTTCSSCCCTTCHHHHHHHHHHHHHHHHHTTCSEEEEEEESSCEEEEE
T ss_pred ceeeecCccccchhHhhhHheehhhhcccChHHHHhhccCCHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEE
Confidence 3456888 99999999988876542221 1 111122222 11225678888899999999
Q ss_pred EEEE-ec-------------CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHH-HHHCCC
Q 007275 504 ALFP-FF-------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADW-FKSRGF 566 (609)
Q Consensus 504 ~l~~-~~-------------~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~f-Yek~GF 566 (609)
.+.+ .. ....++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.. ..+.+| |+++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~~y~k~GF 162 (190)
T 2gan_A 83 ALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFPNLEAYSYYYMKKGF 162 (190)
T ss_dssp EEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCEEEEEECGGGSHHHHHHHTTTE
T ss_pred EEEecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecCCccccccEEecCCC
Confidence 9985 32 224789999999999999999999999999999999999999863 368999 999999
Q ss_pred eEeeee
Q 007275 567 RECSIE 572 (609)
Q Consensus 567 ~~~~~~ 572 (609)
+..+..
T Consensus 163 ~~~~~~ 168 (190)
T 2gan_A 163 REIMRY 168 (190)
T ss_dssp EEEECC
T ss_pred EEeecc
Confidence 988654
|
| >2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.7e-12 Score=114.92 Aligned_cols=110 Identities=12% Similarity=0.161 Sum_probs=81.0
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqG 529 (609)
.+++++.+|++++..++.... ...+ .......+++++.++++|||+.+... ...++|..++|+|+|||||
T Consensus 7 ~i~~~~~~d~~~l~~l~~~~~----~~~~----~~~~~~~~~va~~~~~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~G 76 (128)
T 2k5t_A 7 RLEKFSDQDRIDLQKIWPEYS----PSSL----QVDDNHRIYAARFNERLLAAVRVTLS--GTEGALDSLRVREVTRRRG 76 (128)
T ss_dssp ECSSCCHHHHHHHHHHCTTSC----CCCC----CCCSSEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECTTCSSSS
T ss_pred EehhCCHHHHHHHHHHcccCC----HHHh----EECCCccEEEEEECCeEEEEEEEEEc--CCcEEEEEEEECHHHcCCC
Confidence 366777888888877653221 1112 01112357788889999999998743 3569999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEe-H-----HHHHHHHHCCCeEeee
Q 007275 530 QGDKLLDYIEKKAASLGLDMLFLLT-T-----RTADWFKSRGFRECSI 571 (609)
Q Consensus 530 iG~~LL~~l~~~A~~~G~~~I~l~t-~-----~a~~fYek~GF~~~~~ 571 (609)
+|++||+.++++++. +..+.+.+ . .+.+||+++||+..+.
T Consensus 77 iG~~Ll~~~~~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~GF~~~~~ 122 (128)
T 2k5t_A 77 VGQYLLEEVLRNNPG--VSCWWMADAGVEDRGVMTAFMQALGFTTQQG 122 (128)
T ss_dssp HHHHHHHHHHHHSCS--CCEEEECCTTCSTHHHHHHHHHHHTCEECSS
T ss_pred HHHHHHHHHHHHhhh--CCEEEEeccCccccHHHHHHHHHcCCCcccc
Confidence 999999999999854 55566633 1 5789999999998764
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.7e-12 Score=116.93 Aligned_cols=117 Identities=16% Similarity=0.213 Sum_probs=88.3
Q ss_pred cccccCC-cCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEE-CCEEEEEEEEEEecCCCeEEEEEEEEcc
Q 007275 449 EGTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSP 523 (609)
Q Consensus 449 ~~IR~a~-~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~-dg~IVG~~~l~~~~~~~~~eI~~iaV~p 523 (609)
+.+|... +.|++++.+++ ..+..+.+.+.+...+ ..++++.+ ++++||++.+.+ .....++|..++|+|
T Consensus 10 i~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p 83 (145)
T 3s6f_A 10 IQFQTTLEGVTPAQLGGFF-----EGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALS-DGILAASIPLLEVQA 83 (145)
T ss_dssp CEEESSCTTCCGGGSCSCC-----TTCSSCCCHHHHHHHHHHSSEEEEEECTTCCEEEEEEEEE-CSSSEEECCCEEECT
T ss_pred eEEeeccccCCHHHHHHHH-----hcCCCCCCHHHHHHHhccCceEEEEECCCCCEEEEEEEEe-cCCcEEEEEEEEECH
Confidence 4566653 67777777775 2333344555555444 45566666 799999998873 345678999999999
Q ss_pred cCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeec
Q 007275 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 524 ~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~ 573 (609)
+|||+|+|++||+.++++++ +...+.+.+ ..+.+||+|+||+..+...
T Consensus 84 ~~rg~GiG~~Ll~~~~~~~~--~~~~~~l~~~~~a~~fY~k~GF~~~~~~~ 132 (145)
T 3s6f_A 84 GWRSLGLGSELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMF 132 (145)
T ss_dssp TSCSSSHHHHHHHHHHHHHC--SCSEEECCCCGGGHHHHHHTTCCCCCCCC
T ss_pred HHhcCcHHHHHHHHHHHHhc--CCCeEEEEECHHHHHHHHHCCCEECCcEE
Confidence 99999999999999999996 566677766 4799999999999976553
|
| >2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A | Back alignment and structure |
|---|
Probab=99.30 E-value=9.8e-12 Score=113.75 Aligned_cols=110 Identities=16% Similarity=0.104 Sum_probs=92.7
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH--hhcCeEEEEEECCEEEEEEEEEEec--CCCeEEEEEEEEcccC
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVEREGQIIACAALFPFF--KEKCGEVAAIGVSPEC 525 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~--~~i~~~~V~~~dg~IVG~~~l~~~~--~~~~~eI~~iaV~p~~ 525 (609)
.||+++++|++.+..|+.... .+.+.+. .....+||++.+|+++||+.+++.. +...+.|.+++ |
T Consensus 2 ~IR~a~~~D~~~l~~L~~~~~-------~~~~~L~~~~~~~~~fVAe~~g~ivG~v~l~~~i~gdg~~~~L~dl~----~ 70 (141)
T 2d4p_A 2 RFRPFTEEDLDRLNRLAGKRP-------VSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRIE----G 70 (141)
T ss_dssp EEECCCGGGHHHHHHTSTTSC-------CCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEEE----E
T ss_pred eEEECCHHHHHHHHHHHccCc-------chHHHHHhcCCCCeEEEEEECCEEEEEEeeeeEEEcCCeEEEEeHHh----h
Confidence 589999999999999976411 4455555 5567899999999999999888644 33457788888 9
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
|++|||+.||++++++|++.|+.++.|.| ..+..||+++||+..+
T Consensus 71 R~~GIG~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~Gf~~~~ 119 (141)
T 2d4p_A 71 RSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALGP 119 (141)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCCS
T ss_pred ccccHHHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHCCCEecC
Confidence 99999999999999999999999999988 3789999999999765
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=6.1e-11 Score=122.45 Aligned_cols=124 Identities=17% Similarity=0.136 Sum_probs=96.6
Q ss_pred cccccCCcCCHHHHHHHH---hhhHhhccC-ccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEecCCCeEEE
Q 007275 449 EGTRTAKVTDLSGIKQII---QPLVESGAL-VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~---~~~~~~~~~-~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~~~~~~eI 516 (609)
..||+++++|.+.+.++. .......+. .+.+.+.+..++ ..+|+++.+|++||++.+........++|
T Consensus 8 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i 87 (339)
T 2wpx_A 8 LEFVPLAANDDETVGQWLDLMALAAETGPRAAPPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARV 87 (339)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHSSSSCCCCCHHHHHHHHHCCCTTEEEEEEEEEETTEEEEEEEEEEETTCSEEEE
T ss_pred eEEEECCccCHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhccCCCcceeEEEEEECCEEEEEEEEEecCCCCeEEE
Confidence 469999999966655544 333322221 122566655554 24688889999999999986545578999
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-----------HHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-----------RTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-----------~a~~fYek~GF~~~~~~ 572 (609)
..++|+|+|||+|+|++|++.+++++++.|++.+.+.+. .+.+||+++||+..+..
T Consensus 88 ~~~~v~p~~r~~Gig~~Ll~~~~~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~~~~~Gf~~~~~~ 154 (339)
T 2wpx_A 88 DQLLVHPGRRRRGIGRALWAHARELARKHDRTTLTATVVESLPSGPAQDPGPAAFAAAMGAHRSDIP 154 (339)
T ss_dssp EEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEEEECCSSSCCCCCHHHHHHHHTTCEECSSC
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEeecCCCCcccccchHHHHHHHCCCeeeeee
Confidence 999999999999999999999999999999999999872 69999999999987643
|
| >2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.3e-11 Score=117.34 Aligned_cols=141 Identities=11% Similarity=0.088 Sum_probs=105.6
Q ss_pred ccccCCcCC-HHHHHHHHhhhHh-hccCcc-CCHHHHHhhcCeEEEEEECCEEEEEEEEEEecC----------------
Q 007275 450 GTRTAKVTD-LSGIKQIIQPLVE-SGALVR-RTDEELLKALDSFYVVEREGQIIACAALFPFFK---------------- 510 (609)
Q Consensus 450 ~IR~a~~~D-~~~I~~L~~~~~~-~~~~~~-~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~---------------- 510 (609)
.+|.++.+| ++++.+|....+. .++... ...+.+......+++++.+|++|||+.+.+...
T Consensus 8 ~ir~a~~~~~~~~i~~Lr~~~y~e~~~~~~~~~~~~~~~~~~~~~~a~~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~~~ 87 (198)
T 2g0b_A 8 VARILVAPNERDAARRIVRTTYEAQGYAIDESFATFLEGPSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELAAW 87 (198)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHTSTTEEEEEEEETTEEEEEEEEEECBTTBCTTHHHHHHHHHHH
T ss_pred eEEEeCCHHHHHHHHHHHHHHHHHhccCcccccchhhcCCCcEEEEEEECCEEEEEEEEEeCCCcCCchhhhchhhhhhh
Confidence 478887666 9999999887544 444333 111222223356788889999999999985332
Q ss_pred ----CCeEEEEEEEEcccC--------cCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeecchhH
Q 007275 511 ----EKCGEVAAIGVSPEC--------RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEE 577 (609)
Q Consensus 511 ----~~~~eI~~iaV~p~~--------RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp~~ 577 (609)
...++|.+|+|+|+| ||+|+|..||+.++++|++.|++.+++.+ .++.+||+++||+.++...+
T Consensus 88 ~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~~~a~~~a~~~g~~~i~levn~ra~~FY~k~GF~~~g~~~f--- 164 (198)
T 2g0b_A 88 RGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLFTMVLTYALETHIDYLCISINPKHDTFYSLLGFTQIGALKH--- 164 (198)
T ss_dssp HHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEEEE---
T ss_pred hhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHHHHHHHHHHHcCCCEEEEEeCHHHHHHHHHCCCEEeeCCcc---
Confidence 258999999999999 99999999999999999999999999977 48899999999999887631
Q ss_pred hhhhcccCCCceeEEeecCC
Q 007275 578 RRKRINLSRNSKYYMKKLLP 597 (609)
Q Consensus 578 ~~~~y~~~~~s~i~mkkll~ 597 (609)
|...+...++|..-++
T Consensus 165 ----y~~~g~p~~lm~~~~~ 180 (198)
T 2g0b_A 165 ----YGTVNAPAIARALYVP 180 (198)
T ss_dssp ----ETTTTEEEEEEEEEGG
T ss_pred ----CCCCCcceEeeecCHH
Confidence 2223456677765554
|
| >2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.1e-11 Score=116.95 Aligned_cols=124 Identities=11% Similarity=0.019 Sum_probs=91.6
Q ss_pred cccccCCcCCHHHHHHHHhh----hHhhccCccC----C---H-HHHHhh----c-------CeEEEEEECCEEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQP----LVESGALVRR----T---D-EELLKA----L-------DSFYVVEREGQIIACAAL 505 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~----~~~~~~~~~~----~---~-e~l~~~----i-------~~~~V~~~dg~IVG~~~l 505 (609)
..||+++.+|++.+.++++. .....+..++ + . +.+... . ..++++..++++||++.+
T Consensus 17 l~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~ 96 (218)
T 2vzy_A 17 LQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQAL 96 (218)
T ss_dssp EEEECCCHHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHTCBTTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCHHHHHHHHHHHhhcccCccccccccCcCCcCchHHHHHHHHHHHHhhcccCcCCceEEEEEEECCEEEEEEEE
Confidence 57999999999999999863 1111111111 1 1 111111 1 145677889999999999
Q ss_pred EEec--CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 506 FPFF--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 506 ~~~~--~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
.... ....+++ .++|+|+|||||+|++|++.++++|++ .|+++|.+.+ .++.+||+|+||+..+...
T Consensus 97 ~~~~~~~~~~~ei-g~~v~~~~rgkGig~~ll~~l~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~~ 170 (218)
T 2vzy_A 97 SSKDFPITRQVDS-GSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDR 170 (218)
T ss_dssp EEESHHHHCEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred eccccCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCceEEEEEeccCCHHHHHHHHHCCCEEeeeee
Confidence 8654 2457788 579999999999999999999999998 7999999988 3799999999999988653
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=6.8e-11 Score=110.10 Aligned_cols=92 Identities=21% Similarity=0.271 Sum_probs=78.9
Q ss_pred HHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH--
Q 007275 480 DEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-- 555 (609)
Q Consensus 480 ~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-- 555 (609)
.+.+...+ ..++++..++++||++.+.+ .....++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+.
T Consensus 29 ~~~~~~~l~~~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~ 107 (163)
T 1yvk_A 29 KDIVDEYLERGECYTAWAGDELAGVYVLLK-TRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNS 107 (163)
T ss_dssp HHHHHHHHHHSEEEEEEETTEEEEEEEEEE-CSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEEEe-cCCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 33444433 56788889999999999984 35678999999999999999999999999999999999999999882
Q ss_pred --HHHHHHHHCCCeEeeee
Q 007275 556 --RTADWFKSRGFRECSIE 572 (609)
Q Consensus 556 --~a~~fYek~GF~~~~~~ 572 (609)
++.+||+++||+..+..
T Consensus 108 n~~a~~~y~k~GF~~~~~~ 126 (163)
T 1yvk_A 108 SIHQLSLYQKCGFRIQAID 126 (163)
T ss_dssp CHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHCCCEEecee
Confidence 58999999999998764
|
| >4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.8e-11 Score=120.33 Aligned_cols=130 Identities=12% Similarity=0.072 Sum_probs=93.6
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhc------cC---ccCCHHHHHhhc------CeEEEEEE--CCEEEEEEEEEEecC
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESG------AL---VRRTDEELLKAL------DSFYVVER--EGQIIACAALFPFFK 510 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~------~~---~~~~~e~l~~~i------~~~~V~~~--dg~IVG~~~l~~~~~ 510 (609)
...||+++++|++.+.+++....... .. .+.+.+.+...+ ...+|+.+ +|+|||++.+.+...
T Consensus 30 ~~~IR~~~~~D~~~i~~~l~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~IVG~a~~~~~~~ 109 (238)
T 4fd7_A 30 WYRVQDLPEDRFEDAIRHMCDYFARDELMNQAKGLAKDLVAMGDVVALWKAMLPDRMSLVCFREGSDEIVGVNILDVASR 109 (238)
T ss_dssp EEEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTGGGCHHHHHHHHHHHHHHGGGSCCEEEEETTCCSEEEEEEEEEEET
T ss_pred eEEEEECCHHHHHHHHHHHHhhccCcChhhHHhCCCCChhhHHHHHHHHHHHHhCCcEEEEEECCCCcEEEEEEecccCc
Confidence 46799999999999999876532111 00 111122222221 34456654 579999998875432
Q ss_pred -----------------------------------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-
Q 007275 511 -----------------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 554 (609)
Q Consensus 511 -----------------------------------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t- 554 (609)
+...++..++|+|+|||||+|++|++.++++|++.|++.+.+.+
T Consensus 110 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~~~~ 189 (238)
T 4fd7_A 110 SDKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEILRARIPLCRAVGLKLSATCFT 189 (238)
T ss_dssp TCCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHHHTCCEEEEEEC
T ss_pred ccccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence 22456778999999999999999999999999999999776644
Q ss_pred -HHHHHHHHHCCCeEeeeecchhH
Q 007275 555 -TRTADWFKSRGFRECSIEMIPEE 577 (609)
Q Consensus 555 -~~a~~fYek~GF~~~~~~~lp~~ 577 (609)
..+.+||+++||+..+......-
T Consensus 190 n~~a~~~y~k~GF~~~~~~~~~~~ 213 (238)
T 4fd7_A 190 GPNSQTAATRVGFQEDFTITYGEL 213 (238)
T ss_dssp SHHHHHHHHHHTCEEEEEEEHHHH
T ss_pred CHHHHHHHHHCCCEEEEEEEehhe
Confidence 47999999999999987655543
|
| >3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.27 E-value=6.8e-11 Score=118.29 Aligned_cols=126 Identities=15% Similarity=0.024 Sum_probs=99.1
Q ss_pred cccccccCCc-CCHHHHHHHHh---hhHhhccC---ccCCHHHHHhhc--------CeEEEEEE--CCEEEEEEEEEEec
Q 007275 447 LYEGTRTAKV-TDLSGIKQIIQ---PLVESGAL---VRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF 509 (609)
Q Consensus 447 ~~~~IR~a~~-~D~~~I~~L~~---~~~~~~~~---~~~~~e~l~~~i--------~~~~V~~~--dg~IVG~~~l~~~~ 509 (609)
....||+++. +|.+.+.+++. ......+. ...+.+....++ ..+|++.. ++++||++.+....
T Consensus 42 ~~l~LR~~~~e~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~~g~~IG~~~l~~~~ 121 (246)
T 3tcv_A 42 RYVRLEPLNAQKHGDELFAASSVEDAEQRFTWLFETPPATRAEFEPWLDKASKSDDPLFFAVIDKASGKVAGRQALMRID 121 (246)
T ss_dssp SSEEEEECCHHHHHHHHHHHHTSTTHHHHHTTSSSCCCSSHHHHHHHHHHHHHCSSSEEEEEEETTTCSEEEEEEEEEEE
T ss_pred CcEEEEECCchhhHHHHHHHhcCCCCHHHHhccCCCCCCCHHHHHHHHHHHhcCCCceEEEEEECCCCCEEEEEEEeecc
Confidence 4457999999 79999999986 33222222 234555555544 23555653 89999999997543
Q ss_pred -CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 -~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
....++|+.++|+|+|||+|+|++++..++++|.+ .|+++|.+.+ .++.+||+|+||+..+..
T Consensus 122 ~~~~~~eig~~~v~p~~rgkGig~~ll~~ll~~a~~~~g~~~i~l~v~~~N~~s~~lyek~GF~~~G~~ 190 (246)
T 3tcv_A 122 PANGVIEIGSIYWGPLISRRPAATEAQFLFMQYVFDVLGYRRYEWECHNENGPSRRAAERFGFRFEGIF 190 (246)
T ss_dssp TTTTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred cccCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCcEEEEEEccCCCHHHHHHHHHCCCEEEEEE
Confidence 35789998888999999999999999999999987 5999999988 379999999999998865
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-11 Score=125.50 Aligned_cols=124 Identities=15% Similarity=0.128 Sum_probs=95.6
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc-----c----Cc----cCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCC
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG-----A----LV----RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKE 511 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~-----~----~~----~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~ 511 (609)
|...||+++++|++.+.++........ + .. .+..+.+...+ ..++++..++++||++.+... ..
T Consensus 4 m~i~IR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~va~~~g~iVG~~~~~~~-~~ 82 (266)
T 3c26_A 4 ADIVFDRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVSGRPVATIHMEKL-PD 82 (266)
T ss_dssp --CEEEECCGGGHHHHTTCBSCCSCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEEC-TT
T ss_pred ceEEEEECCHHHHHHHHHHHHHHhhcccccccccccccchhhhHHHHHHHHHhccCCcEEEEEECCEEEEEEEEEEc-CC
Confidence 446799999999999999865432211 0 00 11122233322 467888899999999999854 36
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||||+|++|++.+++++++.|++.+ +.+ .++.+||+|+||+..+..
T Consensus 83 ~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i-l~v~~~N~~a~~~Yek~GF~~~~~~ 146 (266)
T 3c26_A 83 GSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRGKTERLR-SAVYSWNEPSLRLVHRLGFHQVEEY 146 (266)
T ss_dssp SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHBTTBSEEE-EEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred CeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEE-EEEcCCCHHHHHHHHHCCCEEeeEE
Confidence 789999999999999999999999999999999999999 776 378999999999988754
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.5e-11 Score=122.43 Aligned_cols=124 Identities=14% Similarity=0.021 Sum_probs=99.7
Q ss_pred cccccCCcCC-HHHHHHHHhhhHhhccC-ccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecCCCeEEEEEE
Q 007275 449 EGTRTAKVTD-LSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (609)
Q Consensus 449 ~~IR~a~~~D-~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~i 519 (609)
..||+++.+| ++.+.++.+......+. .+.+.+.+...+ ..+++++.+|++||++.+.+......++|..+
T Consensus 173 ~~ir~~~~~dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i~~~ 252 (330)
T 3tt2_A 173 ITARTFVPGLDERATYEAVEEAFGDIWGRPPSTFERWLSMTQSERKDPELWLLAVETDSGHIVGTCLGQETAGKGWIGSV 252 (330)
T ss_dssp EEEEECCTTTSHHHHHHHHHHHTC----CCCCCHHHHHHHHTTGGGCGGGEEEEEETTTTEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEecCcccchHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhCCCCCccEEEEEEECCEEEEEEEEecCCCCCcEEEEEe
Confidence 4799999999 99999998776544332 344555554322 35788888999999999986445678999999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-----HHHHHHHHHCCCeEeeee
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-----~~a~~fYek~GF~~~~~~ 572 (609)
+|+|+|||+|+|++|+..+++++++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 253 ~v~p~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF~~~~~~ 310 (330)
T 3tt2_A 253 GVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKHRY 310 (330)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHTTCEEEEEE
T ss_pred eECHHHhhcCHHHHHHHHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHcCCEEeEEE
Confidence 99999999999999999999999999999998876 258899999999997654
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-11 Score=129.28 Aligned_cols=121 Identities=17% Similarity=0.242 Sum_probs=95.9
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh------cCeEEEEEECCEEEEEEEEEEecC---C---CeE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK---E---KCG 514 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~------i~~~~V~~~dg~IVG~~~l~~~~~---~---~~~ 514 (609)
|...||+++.+|++.+.+++..... .+++.+....+ ...++++++++++||++.+.++.. + ..+
T Consensus 2 m~~~iR~~~~~D~~~i~~L~~~~f~----~~~~~~~~~~~~~~~~~~~~~~v~~~~g~lvG~~~~~~~~~~~~~~~~~~~ 77 (388)
T 3n7z_A 2 NAMNVIRLKEDKFREALRLSEYAFQ----YKVDEDRLQQQITKMKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMG 77 (388)
T ss_dssp --CCEEECCGGGHHHHHHHHHHHTT----CCCCHHHHHHHHHHHHHHCEEEEEEETTEEEEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEECCHHHHHHHHHHHHHhCC----CCCChHHHHHHHHhhcCcccEEEEEECCEEEEEEEEEeEEEEECCEEEEee
Confidence 4457999999999999999766532 23444433322 157889999999999999775421 1 357
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
+|..++|+|+|||||+|++||+.+++++++.|+..+.+.. .+.+||+++||+..+..
T Consensus 78 ~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~l~~-~a~~~Y~~~Gf~~~~~~ 134 (388)
T 3n7z_A 78 GVAGVATYPEYRRSGYVKELLQHSLQTMKKDGYTVSMLHP-FAVSFYRKYGWELCANL 134 (388)
T ss_dssp EEEEEEECGGGGGGCHHHHHHHHHHHHHHHHTCCEEEECC-SCHHHHHTTTCEEEEEE
T ss_pred EEEEEEECHHHCCCChHHHHHHHHHHHHHHCCCcEEEEcc-CChhhhhhcCcEEeccE
Confidence 8999999999999999999999999999999999888764 68999999999987653
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-11 Score=123.40 Aligned_cols=123 Identities=11% Similarity=0.128 Sum_probs=90.3
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccC---CHHHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~---~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~i 519 (609)
..+.||+++.+|++++..+....... +..++ ..+.+...+ ..++++..+|++||++.+.. .+..++|..+
T Consensus 117 ~~i~Ir~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~va~~~g~~vG~~~~~~--~~~~~~i~~l 193 (254)
T 3frm_A 117 RDVDIQLVSSNNINDYLHVYDAFARP-FGDSYANMVKQHIYSSYNLDDIERLVAYVNHQPVGIVDIIM--TDKTIEIDGF 193 (254)
T ss_dssp CSCEEEECCTTTHHHHHHHHTTSCCT-TCHHHHHHHHHHHHHHTTTSSCEEEEEEETTEEEEEEEEEE--CSSCEEEEEE
T ss_pred CceEEEECCccCHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEE--cCCEEEEEEE
Confidence 34679999999999999986543211 11111 112222222 36788899999999999984 3567899999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
+|+|+|||||+|++||+.++++|+..++..+......+.+||+|+||+.++..
T Consensus 194 ~V~p~~Rg~GiG~~Ll~~~~~~a~~~~i~lv~~~n~~a~~~Y~k~GF~~~g~~ 246 (254)
T 3frm_A 194 GVLEEFQHQGIGSEIQAYVGRMANERPVILVADGKDTAKDMYLRQGYVYQGFK 246 (254)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHTTCCEEEEECSSCTTHHHHHHTTCEEEEEE
T ss_pred EECHHHcCCCHHHHHHHHHHHHhccCcEEEEECCchHHHHHHHHCCCEEeeeE
Confidence 99999999999999999999999655443321111489999999999998765
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.23 E-value=5.1e-11 Score=127.76 Aligned_cols=122 Identities=15% Similarity=0.237 Sum_probs=93.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccC-----ccCCHHHHHhh------cCeEEEEEECCEEEEEEEEEEecC------C
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK------E 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~-----~~~~~e~l~~~------i~~~~V~~~dg~IVG~~~l~~~~~------~ 511 (609)
..||+++.+|++.+.++++........ ..|+.+..... ...+++++++|++||++.+.++.. .
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~f~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~va~~~g~lVG~~~~~~~~~~~~g~~~ 89 (406)
T 2i00_A 10 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 89 (406)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred ceEEECCHHHHHHHHHHHHHHcCCCCcccccccccccHHHHHHhhhccccccEEEEEECCEEEEEEEEEEEEEEECCEEE
Confidence 369999999999999997653322110 12332322211 256788999999999999875431 1
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~ 571 (609)
..++|..++|+|+|||||+|++||+.+++++++.|+..+.+.+. +.+||+|+||+.++.
T Consensus 90 ~~~~i~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~~-~~~fY~r~GF~~~~~ 148 (406)
T 2i00_A 90 KMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY-NIPYYRRKGWEIMSD 148 (406)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS-CHHHHHHTTCEEEEE
T ss_pred EeccEEEEEEChhhCCCCHHHHHHHHHHHHHHhCCCeEEEEEcc-ChhhhhccCceEccc
Confidence 35789999999999999999999999999999999998887663 699999999998764
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.1e-11 Score=127.78 Aligned_cols=119 Identities=19% Similarity=0.347 Sum_probs=95.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH---hhcCeEEEEEECCEEEEEEEEEEec------CCCeEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL---KALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAI 519 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~---~~i~~~~V~~~dg~IVG~~~l~~~~------~~~~~eI~~i 519 (609)
..||+++.+|++.+.++++..... .++.+.+. .....++++++++++||++.+.+.. ....++|..+
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v 85 (396)
T 2ozg_A 10 FKYTKASQENIQQLGNILEQCFVM----SFGDSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAV 85 (396)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTC----CTTHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHhhhcccCcEEEEEECCEEEEEEEEEeccceECCeecceeEEEEE
Confidence 469999999999999997665332 22333333 2223388888999999999998642 2356789999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
+|+|+|||||+|++||+.+++++++.|+..+.+. ..+.+||+++||+..+..
T Consensus 86 ~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~i~ln-~~a~~~Y~~~GF~~~~~~ 137 (396)
T 2ozg_A 86 GIAPEYRGDGAAIALIQHTLQEISEQDIPISVLY-PATQRLYRKAGYEQAGSS 137 (396)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEC-CSCHHHHHHTTCEEEEEE
T ss_pred EEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEc-cccHHHHHhcCCeEcccE
Confidence 9999999999999999999999999999999884 478999999999987643
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-10 Score=118.55 Aligned_cols=124 Identities=19% Similarity=0.166 Sum_probs=97.5
Q ss_pred cccccCCcC-CHHHHHHHHhhhHhhcc-CccCCHHHHHhhc-------CeEEEEE------ECCEEEEEEEEEEecC-CC
Q 007275 449 EGTRTAKVT-DLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVE------REGQIIACAALFPFFK-EK 512 (609)
Q Consensus 449 ~~IR~a~~~-D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~i-------~~~~V~~------~dg~IVG~~~l~~~~~-~~ 512 (609)
..||+++.+ |.+.+.++.+....... ..+++.+.+...+ ..++++. .++++|||+.+..... ..
T Consensus 155 ~~ir~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~g~~vG~~~~~~~~~~~~ 234 (318)
T 1p0h_A 155 VVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPG 234 (318)
T ss_dssp EEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTSTT
T ss_pred eEEEecCcccchHHHHHHHHHHhccCCCCCCcCHHHHHHHhhCcccCcCceEEEEeccccCCCCcEEEEEEeeccCCCCc
Confidence 469999999 99999999877544322 2356666665543 2467777 7899999998874432 24
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC----------CEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL----------DMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~----------~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|..++|+|+|||+|+|++|+..+++++++.|+ +.+.+.+ ..+.+||+++||+..+..
T Consensus 235 ~~~i~~~~V~p~~rg~Glg~~ll~~~~~~~~~~g~~~~~~~~~~~~~i~l~v~~~N~~a~~~y~~~GF~~~~~~ 308 (318)
T 1p0h_A 235 LGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVD 308 (318)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEEEECHHhccCCHHHHHHHHHHHHHHHcccccccccccccceEEEEecCCCHHHHHHHHhcCCEEEeEE
Confidence 79999999999999999999999999999999999 9988877 378999999999987654
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=6.9e-11 Score=126.40 Aligned_cols=121 Identities=12% Similarity=0.192 Sum_probs=93.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh--cCeEEEEEECCEEEEEEEEEEecC------CCeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--LDSFYVVEREGQIIACAALFPFFK------EKCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~--i~~~~V~~~dg~IVG~~~l~~~~~------~~~~eI~~ia 520 (609)
..||+++.+|++.+.++.+..........+ .+.+... ...+++++++|++||++.+.++.. ...++|..++
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~f~~~~~~~~-~~~~~~~~~~~~~~va~~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v~ 85 (400)
T 2hv2_A 7 KRVKKMGKEEMKEMFDLVIYAFNQEPTAER-QERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 85 (400)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCCHHH-HHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHHcCCCCcHHH-HHHHHhhcccCcEEEEEECCEEEEEEEEeeeEEEECCEEEEeccEeEEE
Confidence 479999999999999997654332211000 1122221 256888999999999999876431 1357899999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~ 571 (609)
|+|+|||||+|++||+++++++++.|+..+.+.+ .+.+||+++||+..+.
T Consensus 86 V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~L~~-~~~~~Y~~~GF~~~~~ 135 (400)
T 2hv2_A 86 SYPEYRGEGGISAIMKEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 135 (400)
T ss_dssp ECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred EChhhcCCCHHHHHHHHHHHHHHHcCceEEEEec-CCHhHHHhcCCEEece
Confidence 9999999999999999999999999999888765 3589999999998753
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=3.5e-11 Score=125.28 Aligned_cols=121 Identities=13% Similarity=0.023 Sum_probs=91.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhh----ccC-c-cCCHHHHHhhc------CeEEEEEECCEEEEEEEEEEecC-CCeEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVES----GAL-V-RRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK-EKCGE 515 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~----~~~-~-~~~~e~l~~~i------~~~~V~~~dg~IVG~~~l~~~~~-~~~~e 515 (609)
..||+++++|.+.+.+++...... .+. . ....+...... ...|++++++++||++.+..... ...++
T Consensus 156 l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~e 235 (333)
T 4ava_A 156 LMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAE 235 (333)
T ss_dssp EEEEECCTTCGGGTCCCSSCCCHHHHHGGGCC-----HHHHHHHHHHCCSSEEEEEEEETTEEEEEEEEEECSSCTTEEE
T ss_pred EEecCCChhHHHHHHHHHHhCChhhHHHHHcCCCCCCHHHHHHHhccCccccEEEEEEeCCCeEEEEEEEecCCCCCeEE
Confidence 469999999999998776542111 111 1 12222222111 34678888999999999986544 35677
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
+ .++|+|+|||+|+|++|++.++++|++.|++++++.+ .++.+||+|+||+..+
T Consensus 236 ~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 293 (333)
T 4ava_A 236 I-AFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQR 293 (333)
T ss_dssp E-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCEE
T ss_pred E-EEEECHHhcCCCHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCceec
Confidence 7 7999999999999999999999999999999999988 4889999999999763
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.6e-11 Score=130.52 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=94.5
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh---c--CeEEEEEEC----CEEEEEEEEEEecC---C---
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA---L--DSFYVVERE----GQIIACAALFPFFK---E--- 511 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~---i--~~~~V~~~d----g~IVG~~~l~~~~~---~--- 511 (609)
|...||+++++|++.+.++++... ..+++.+....+ + ..+++++++ |++||++.+.+... +
T Consensus 27 m~~~IR~~~~~D~~~i~~L~~~~F----~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~g~lVG~~~~~~~~~~~~gg~~ 102 (428)
T 3r1k_A 27 MTVTLCSPTEDDWPGMFLLAAASF----TDFIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVV 102 (428)
T ss_dssp --CEEECCCGGGHHHHHHHHHHHC----TTCCCHHHHHHHGGGSCTTCEEEEECC----CCEEEEEEEEEEEEEETTTEE
T ss_pred CceEEEECCHHHHHHHHHHHHHHc----CCCCChHHHHHHHhhcCCCcEEEEEecCCCCCcEEEEEEEEeeeeccCCCcc
Confidence 445799999999999999977543 223343333222 2 467888876 99999999876431 1
Q ss_pred -CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 512 -KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 -~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||||+|++||+.+++++++.|+..+.+.+ .+.+||+|+||+.++..
T Consensus 103 ~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~a~~~g~~~~~L~~-~a~~fY~r~GF~~~~~~ 163 (428)
T 3r1k_A 103 LPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHA-SEGGIYGRFGYGPATTL 163 (428)
T ss_dssp EEEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEC-SSTTSSGGGTCEECCEE
T ss_pred cceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec-CCHHHHHhCCCEEeeeE
Confidence 3578999999999999999999999999999999999888865 46899999999987643
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-10 Score=116.26 Aligned_cols=121 Identities=20% Similarity=0.196 Sum_probs=93.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccC-ccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~ia 520 (609)
+.||+++.+|++.+.+++.......+. ...+.+.+...+ ..+++++.+|++||++.+.+. .....+..++
T Consensus 13 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~--~~~~~~~~~~ 90 (330)
T 3tt2_A 13 FIARAPVPADAPAIARLIAACQEADGDEPDASAEEVLRDWEGLDLGQEAVLVVAPDGEAAAYADVLNR--RYVQLSVYGY 90 (330)
T ss_dssp CEEECCCGGGHHHHHHHHHHHHHHTTCCCCCCHHHHHHHTTTSCHHHHEEEEECTTSSEEEEEEEEEE--TTTEEEEEEE
T ss_pred eeeCCCChHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHhhccCcccceEEEECCCCcEEEEEEEEec--CCeEEEEEEE
Confidence 469999999999999999886555443 445666666554 256777778999999999642 3344555799
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHC-------CCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASL-------GLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~-------G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
|+|+|||+|+|++||+.+++++++. +...+.+.+ ..+.+||+++||+....
T Consensus 91 V~p~~rg~Gig~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y~~~Gf~~~~~ 152 (330)
T 3tt2_A 91 VHPRFRGMGLGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQHGYRPVRD 152 (330)
T ss_dssp ECTTSTTSSHHHHHHHHHHHHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ECccccCccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeccccCChHHHHHHHhCCCceEEE
Confidence 9999999999999999999999886 445554444 36899999999998654
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.12 E-value=6.6e-11 Score=128.15 Aligned_cols=118 Identities=14% Similarity=0.192 Sum_probs=94.3
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHH---HHhhc--CeEEEEEEC--CEEEEEEEEEEec----CC---CeEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE---LLKAL--DSFYVVERE--GQIIACAALFPFF----KE---KCGE 515 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~---l~~~i--~~~~V~~~d--g~IVG~~~l~~~~----~~---~~~e 515 (609)
.||+++++|++.+.++++.... .+++.+. +...+ ..+++++++ +++||++.+.+.. .. ..++
T Consensus 26 ~IR~~~~~D~~~i~~L~~~~F~----~~~~~~~~~~~~~~~~~~~~~va~~~~~g~lvG~~~~~~~~~~~~g~~~~~~~~ 101 (422)
T 3sxn_A 26 TLHTITDDDWTRIALLARFAFG----DIEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDMQLTVPGGEVLPVAG 101 (422)
T ss_dssp EESSCCHHHHHHHHHHHHHHHS----CCCCHHHHHHHHTTCCTTCEEEEECTTSSSEEEEEEEEEEEEECTTSCEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHcC----CCCChHHHHHHHhhcCCCcEEEEEECCCCcEEEEEEEEEeEeecCCCcccccce
Confidence 6999999999999999876542 2333332 22222 467888888 9999999988643 11 3478
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
|..++|+|+|||||+|++||+.+++.+++.|+..+.+.+ .+.+||+|+||+.++..
T Consensus 102 I~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~-~~~~fY~r~GF~~~~~~ 157 (422)
T 3sxn_A 102 ISFVAVAPTHRRRGVLRAMYTELHDRIARAGYPLAVLTA-SEGGIYGRFGYGVATIE 157 (422)
T ss_dssp EEEEEECTTTTTSSHHHHHHHHHHHHHHHHTCSEEEECC-SSTTSSGGGTCEECCEE
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCHHHHHhCCCEEecee
Confidence 999999999999999999999999999999998887764 46799999999988654
|
| >2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.3e-10 Score=105.52 Aligned_cols=109 Identities=14% Similarity=0.313 Sum_probs=84.0
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecC---------CCeEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK---------EKCGEVA 517 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~---------~~~~eI~ 517 (609)
.+..||+++.+|++.+.++........ ....++++..+++++|++.+..... ...++|.
T Consensus 19 ~~~~iR~~~~~D~~~i~~l~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i~ 86 (163)
T 2pr1_A 19 EFKKFKEYGIQELSMLEELQDNIIEND------------STSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELW 86 (163)
T ss_dssp HHTTSSSCCHHHHHHHHHHHHCGGGTT------------EEEEEEEEEETTEEEEEEEEEEECTTSSCCSGGGCCEEEEE
T ss_pred ceeeeEEcChhhHHHHHHHHHHhhccc------------cCCceEEEEeCCceeEEEEEEecCCeeeeEEecCCCEEEEE
Confidence 345799999999999999876432211 1234567778999999998875432 3468999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++||+.+++. |+ .+.+.+ +++.+||+|+||+..+..
T Consensus 87 ~l~V~p~~rg~GiG~~Ll~~~~~~----g~-~l~~~~~n~a~~fY~k~GF~~~~~~ 137 (163)
T 2pr1_A 87 KLEVLPGYQNRGYGRALVEFAKSF----KM-PIRTNPRMKSAEFWNKMNFKTVKYD 137 (163)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHTT----CS-CEEECCCGGGHHHHHHTTCEECCCC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHc----Cc-EEEEecCchHHHHHHHcCCEEeeeE
Confidence 999999999999999999999983 54 355544 478999999999998764
|
| >2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=99.08 E-value=6.1e-11 Score=116.57 Aligned_cols=104 Identities=16% Similarity=0.091 Sum_probs=77.7
Q ss_pred CeEEEEEECCEEEEEEEEEEecC---------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCE---------
Q 007275 488 DSFYVVEREGQIIACAALFPFFK---------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM--------- 549 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~---------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~--------- 549 (609)
..++|++.||++||++.+.+... ...++|..++|+|+|||+|+|++||+.++++|+..++..
T Consensus 61 ~~~~vA~~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll~~~~~~a~~~~~i~l~~~~~~~~ 140 (211)
T 2q04_A 61 GRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHW 140 (211)
T ss_dssp CEEEEEEETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHTSGGGGGSEEEEEECGGGC
T ss_pred cEEEEEEECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceeeeehhhhc
Confidence 46788899999999999875321 146789889999999999999999999999988765432
Q ss_pred ----EEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 550 ----LFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 550 ----I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
+.+.+ ..|.+||+++||+..+....... + ....++|.++-++
T Consensus 141 ~~~~~~L~V~~~N~~A~~lY~k~GF~~~g~~~~~~~----~---~~d~~~M~r~g~~ 190 (211)
T 2q04_A 141 DLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIA----S---HPANCLMARIGKH 190 (211)
T ss_dssp CHHHHCCCHHHHHHHHHHHHHHTTCEEECCCCHHHH----T---STTCEEEEEECTT
T ss_pred CccccccchhhhhHHHHHHHHHCCCEEeccCCcccc----c---cHHHHhhhhhcCC
Confidence 33333 36899999999999987532111 1 2347888776554
|
| >3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis} | Back alignment and structure |
|---|
Probab=99.06 E-value=9.2e-10 Score=110.90 Aligned_cols=119 Identities=11% Similarity=0.013 Sum_probs=87.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccCccC-CHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~-~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
...||+++++|++.+.... +...+...| +.+.+... ...+++..++++||++.+... .+...++ .++|+|+||
T Consensus 123 ~~~ir~~d~~d~~~~~~~~---w~~~~~~~~~~~~~~~~~-g~~~v~~~~g~iVG~~~~~~~-~~~~~ei-~i~v~p~~r 196 (249)
T 3g3s_A 123 SFDMKLIDRNLYETCLVEE---WSRDLVGNYIDVEQFLDL-GLGCVILHKGQVVSGASSYAS-YSAGIEI-EVDTREDYR 196 (249)
T ss_dssp TSEEEECCHHHHHHHHHST---TTGGGTTTSSSHHHHHHH-CCEEEEEETTEEEEEEEEEEE-ETTEEEE-EEEECGGGT
T ss_pred CcEEEECCHHHHHHHHhcc---CHHHHHHhccCHHHHHhC-CcEEEEEECCEEEEEEEEEEe-cCCeEEE-EEEEChHhc
Confidence 3478999988888876332 222222112 23444333 456677789999999988754 4455666 799999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
|||+|++||+.++++|++.|+....... .++.+||+|+||+..+..
T Consensus 197 GkGlg~~Ll~~li~~a~~~g~~~~~~~~N~~a~~lYeKlGF~~~g~~ 243 (249)
T 3g3s_A 197 GLGLAKACAAQLILACLDRGLYPSWDAHTLTSLKLAEKLGYELDKAY 243 (249)
T ss_dssp TSSHHHHHHHHHHHHHHHTTCEEECEESSHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHCCCEEeeeE
Confidence 9999999999999999999987443322 589999999999998754
|
| >1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-10 Score=97.65 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=68.1
Q ss_pred CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCC-C
Q 007275 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRG-F 566 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~G-F 566 (609)
..+++.+.++++||++.+.+. .+...+|..++|+|+|||+|+|++||+.++++|++.|++.+.+. ..+..||+++| |
T Consensus 11 ~~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~-~~~~nfy~k~~~~ 88 (102)
T 1r57_A 11 NKFYIGDDENNALAEITYRFV-DNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASC-SFAKHMLEKEDSY 88 (102)
T ss_dssp TEEEEESSSTTEEEEEEEEES-SSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESS-HHHHHHHHHCGGG
T ss_pred CEEEEEECCCeEEEEEEEEeC-CCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHcCCCEEEcC-HHHHHHHHhChHH
Confidence 345555578999999999853 34678999999999999999999999999999999999887665 46889999998 9
Q ss_pred eEee
Q 007275 567 RECS 570 (609)
Q Consensus 567 ~~~~ 570 (609)
+...
T Consensus 89 ~~~~ 92 (102)
T 1r57_A 89 QDVY 92 (102)
T ss_dssp TTTB
T ss_pred HHHh
Confidence 8654
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=9.4e-10 Score=113.48 Aligned_cols=83 Identities=11% Similarity=-0.033 Sum_probs=72.2
Q ss_pred EEEEEE--CCEEEEEEEEEEec-CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH--CCCCEEEEEe----HHHHHH
Q 007275 490 FYVVER--EGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS--LGLDMLFLLT----TRTADW 560 (609)
Q Consensus 490 ~~V~~~--dg~IVG~~~l~~~~-~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~--~G~~~I~l~t----~~a~~f 560 (609)
++++.+ +|++|||+.+.... ....++|..++|+|+|||+|+|++||..+++++++ .|++.+.+.+ ..+++|
T Consensus 237 ~~~~~~~~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~~~~~~~~~~~~~g~~~~~l~v~~~N~~a~~l 316 (339)
T 2wpx_A 237 HTGAVHDATGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLKLANLEYVLRHEPEVRLVETANAEDNHPMIAV 316 (339)
T ss_dssp EEEEEETTTTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHH
T ss_pred EEEEEeCCCCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHHHHHHHHHHHhCCCceEEEEecccccHHHHHH
Confidence 566666 89999999988532 34578999999999999999999999999999999 9999999887 378999
Q ss_pred HHHCCCeEeeee
Q 007275 561 FKSRGFRECSIE 572 (609)
Q Consensus 561 Yek~GF~~~~~~ 572 (609)
|+++||+..+..
T Consensus 317 y~~~Gf~~~~~~ 328 (339)
T 2wpx_A 317 NAALGFEPYDRW 328 (339)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCEEeccE
Confidence 999999998754
|
| >2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-09 Score=110.66 Aligned_cols=121 Identities=11% Similarity=-0.022 Sum_probs=91.0
Q ss_pred ccccccCCcC-CHHHHHHHHhhhHhhccC---ccCCHHHHHhh--------cCeEEEEE--ECCEEEEEEEEEEecCCCe
Q 007275 448 YEGTRTAKVT-DLSGIKQIIQPLVESGAL---VRRTDEELLKA--------LDSFYVVE--REGQIIACAALFPFFKEKC 513 (609)
Q Consensus 448 ~~~IR~a~~~-D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~--------i~~~~V~~--~dg~IVG~~~l~~~~~~~~ 513 (609)
...||+++.+ |++.+.+++++.....+. .....+.+... -...|++. .++++ |++.+..... .
T Consensus 16 ~l~lR~~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~-G~~~~~~~~~--~ 92 (301)
T 2zw5_A 16 RLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVP-GMAGLLGGTD--V 92 (301)
T ss_dssp SCEEEECCHHHHHHHHHHHHTCHHHHTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEECCBTTTBCC-EEEEEESSCS--S
T ss_pred CEEEEeCchhcCHHHHHHHhcCchhhhhcCCChHHHHHHHHHHHHHhhccCCceEEEEEECCCCCe-EEEEEecCCC--e
Confidence 3579999999 999999998764443332 12222332221 12344443 36889 9999985433 7
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++|+ ++|+|+|||||+|++|++.++++|. ..|+++|.+.+ .++++||+|+||+..+..
T Consensus 93 ~~ig-~~v~~~~~g~G~g~~l~~~l~~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~ 155 (301)
T 2zw5_A 93 PGLT-WLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARL 155 (301)
T ss_dssp CEEE-EEECTTSTTTTHHHHHHHHHHHHHHTTTCCSEEEEEEESSCHHHHHHHHHTTCEEEEEE
T ss_pred EEEE-EEECHhHcCCCHHHHHHHHHHHHHHhcCCccEEEEEeCCCCHHHHHHHHHcCCcCccee
Confidence 7885 8899999999999999999999995 46999999988 389999999999998864
|
| >2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=4.8e-09 Score=103.68 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=89.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc-cC-ccCCHH----HHHhhc---------CeEEEEE-ECCEEEEEEEEEEecCCC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG-AL-VRRTDE----ELLKAL---------DSFYVVE-REGQIIACAALFPFFKEK 512 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~-~~-~~~~~e----~l~~~i---------~~~~V~~-~dg~IVG~~~l~~~~~~~ 512 (609)
..||+++++|++.+.++........ +. ...+.+ .+..++ ..+|+++ .+|++||++.+.+.. ..
T Consensus 94 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~l~~~~-~~ 172 (235)
T 2ft0_A 94 SGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELN-AT 172 (235)
T ss_dssp CCCEECCGGGHHHHHHHHHHHTTTSTTCTTTSCTTHHHHHHHHHHHHHHTCCTTEEEEEEECTTSCEEEEEEEEECS-SS
T ss_pred ceEEeCCHHhHHHHHHHHHhhHhhccCCCCCCCHHHHHHHHHHHHHHhhccCCCceEEEEECCCCcEEEEEEEEecC-CC
Confidence 3699999999999999988755543 21 111111 222222 3478888 789999999998532 22
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
...++|.| |+|+|++||..+++++++.|++.+.+.+ ..+.+||+++||+.++..
T Consensus 173 ---~~~i~v~~---g~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~lY~k~GF~~~~~~ 230 (235)
T 2ft0_A 173 ---DARIGLLA---GRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTA 230 (235)
T ss_dssp ---EEEEEEEE---CTTCHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ---ceEEEEEc---CCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEeEEE
Confidence 36788888 9999999999999999999999999988 378999999999987654
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=5.3e-09 Score=107.20 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=84.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEEC---CEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVERE---GQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~d---g~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
.+|+++.+|++.|.+++..........+...+ +..++ ..+|+++.+ |++||++.+.+.... ...+..++|+
T Consensus 9 ~~R~~~~~D~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~g~~vG~~~~~~~~~~-~~~~~~l~v~ 86 (318)
T 1p0h_A 9 WRSALTADEQRSVRALVTATTAVDGVAPVGEQ-VLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPRGA-GGAMAELVVH 86 (318)
T ss_dssp CBSCCCHHHHHHHHHHHHHHHHHHSSCSSCHH-HHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEEC
T ss_pred eecCCCHHHHHHHHHHHHHHHHhcCCCchhHH-HHHHhhcCCCcEEEEEeCCCCCcEEEEEEEECCCCC-CcEEEEEEEC
Confidence 35799999999999999876543332333433 33333 357888888 999999999854322 2234478999
Q ss_pred ccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 523 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
|+|||||+|++||+.+++++. ..+.+.+ ..+.+||+++||+..+.
T Consensus 87 p~~rg~Gig~~Ll~~~~~~~~----~~~~~~~~~~~~~a~~~y~~~Gf~~~~~ 135 (318)
T 1p0h_A 87 PQSRRRGIGTAMARAALAKTA----GRNQFWAHGTLDPARATASALGLVGVRE 135 (318)
T ss_dssp GGGCSSSHHHHHHHHHHHHTT----TCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCHHHHHHHHHHHhhc----CEEEEEEcCCCHHHHHHHHHCCCeeEeE
Confidence 999999999999999998762 3345555 36889999999998764
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 | Back alignment and structure |
|---|
Probab=98.91 E-value=5.3e-09 Score=108.70 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=84.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEE-ECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~-~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
..||+++.+|++.+.+++... ...+.+.+...+ ..+.+.. .+|++||++.+. ..++|..++|+|+
T Consensus 174 l~lR~l~~~D~~~i~~~~~~~------~~~~~~~i~~~i~~~~~~~i~~~~~g~~VG~~~~~-----~~~~i~~l~V~p~ 242 (312)
T 1sqh_A 174 FEIRRLRAEDAAMVHDSWPNK------GEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQN-----DFSGLGMLQVLPK 242 (312)
T ss_dssp EEEECCCGGGHHHHHHTCTTC------SSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEEC-----TTSSEEEEEECGG
T ss_pred eEEEECCHHHHHHHHHHhCcC------CcchHHHHHHHHhcCCcEEEEEecCCCEEEEEEEc-----CCceEEEEEECHH
Confidence 469999999999998875321 122333333322 3344444 579999998754 2356888999999
Q ss_pred CcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 525 CRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|||+|+|++|++.++++++ +.|+. +.+.+ .+|++||+|+||+..+..
T Consensus 243 ~rgkGiG~~ll~~l~~~~~~~~g~~-i~l~V~~~N~~A~~lyeklGF~~~g~~ 294 (312)
T 1sqh_A 243 AERRGLGGLLAAAMSREIARGEEIT-LTAWIVATNWRSEALLKRIGYQKDLVN 294 (312)
T ss_dssp GCSSSHHHHHHHHHHHHHHHHSCSC-EEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred HcCCCHHHHHHHHHHHHHHHhCCCe-EEEEEeCCCHHHHHHHHHCCCEEeeeE
Confidence 9999999999999999998 89998 77766 379999999999987653
|
| >1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3 | Back alignment and structure |
|---|
Probab=98.78 E-value=3.3e-08 Score=96.15 Aligned_cols=118 Identities=9% Similarity=0.140 Sum_probs=89.3
Q ss_pred cccCCcCCHHHHHHHHhhhHhh--ccCc----cCCHHHHHhhcCeEEEEEECCEEEEEEEEEEec---------------
Q 007275 451 TRTAKVTDLSGIKQIIQPLVES--GALV----RRTDEELLKALDSFYVVEREGQIIACAALFPFF--------------- 509 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~--~~~~----~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~--------------- 509 (609)
.+..+.+++.++.++....+.. ++.. ....+++......+++..++|++||++.+.+..
T Consensus 11 ~~~~~~~~~~~~~~LR~~VFv~E~g~~~~~~~~~E~D~~D~~~~~~lv~~~~g~~vGt~Rll~~~~~~~l~~~f~~~~~~ 90 (201)
T 1ro5_A 11 REEFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHG 90 (201)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTT
T ss_pred cccCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCEEEEEEeCCeEEEEEecCCCCCCchhhhhhhhhcCC
Confidence 4556667778888887775443 3321 111233333334566666789999999998632
Q ss_pred -----CCCeEEEEEEEEcccCcC----CcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeE
Q 007275 510 -----KEKCGEVAAIGVSPECRG----QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 568 (609)
Q Consensus 510 -----~~~~~eI~~iaV~p~~Rg----qGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~ 568 (609)
....+++.+++|+|++|+ .|+|..||..++++|++.|++.+++.+ ..+.+||+++||..
T Consensus 91 ~~~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~~~~~~~a~~~g~~~~~~~a~~~~~~fy~r~G~~~ 159 (201)
T 1ro5_A 91 KEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDV 159 (201)
T ss_dssp CCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEE
T ss_pred CCCCCCCCEEEeeeeEECchhhccccchHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCe
Confidence 245689999999999998 799999999999999999999999988 58899999999985
|
| >2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.71 E-value=6.5e-08 Score=109.34 Aligned_cols=108 Identities=19% Similarity=0.185 Sum_probs=77.4
Q ss_pred HHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEecC--------------------------
Q 007275 461 GIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK-------------------------- 510 (609)
Q Consensus 461 ~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~-------------------------- 510 (609)
.+.+++.-+...++. .+++++...+ ..++|++.++++||++.+....+
T Consensus 365 ~L~~~~~Ll~~aHYr--~sp~dL~~llD~p~~~l~va~~~g~IVG~i~v~~eG~l~~~~~~~~~~g~rRp~G~lip~~l~ 442 (671)
T 2zpa_A 365 TPLKVYQLLSGAHYR--TSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLA 442 (671)
T ss_dssp HHHHHHHHHHHHSSS--BCHHHHHHHHHCTTEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHTSCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHhcccC--CCHHHHHHHhcCCCceEEEEEECCeEEEEEEEEEcCCcCHHHHHHHHhcccCCCCcchhHHHH
Confidence 344444445555553 3445554433 56888888999999999863211
Q ss_pred ----------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE---eHHHHHHHHHCCCeEeeee
Q 007275 511 ----------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL---TTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 ----------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~---t~~a~~fYek~GF~~~~~~ 572 (609)
...++|..|+|+|+|||+|||++||++++++++. +..+.+. ...+.+||+|+||+.+...
T Consensus 443 ~~~~~~e~~~~~~~~I~~IAV~P~~rg~GiG~~LL~~~e~~a~~--~~~l~v~~~~n~~ai~FYek~GF~~v~ig 515 (671)
T 2zpa_A 443 AHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTQD--LDYLSVSFGYTGELWRFWQRCGFVLVRMG 515 (671)
T ss_dssp HHSSCTTGGGSEEEEEEEEEECTTSCSSSHHHHHHHHHHHTCCS--CSEEEEEEECCHHHHHHHHHTTCEEEEEC
T ss_pred HhhcchhhcccCceEEEEEEECHHHcCCCHHHHHHHHHHHHHhc--CCEEEEEecCCHHHHHHHHHCCCEEEeee
Confidence 2346899999999999999999999999998744 4444333 2578999999999998653
|
| >3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.9e-07 Score=89.56 Aligned_cols=119 Identities=15% Similarity=0.147 Sum_probs=82.9
Q ss_pred cccCCcCCHHHHHHHHhhhHhh--ccCcc-----CCHHHHHhhcCeEEEEEE-CCEEEEEEEEEEec-------------
Q 007275 451 TRTAKVTDLSGIKQIIQPLVES--GALVR-----RTDEELLKALDSFYVVER-EGQIIACAALFPFF------------- 509 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~--~~~~~-----~~~e~l~~~i~~~~V~~~-dg~IVG~~~l~~~~------------- 509 (609)
+..++.+++.++.++....+.. ++..+ ...+.+...-..+++... +|+++|++.+.+..
T Consensus 8 ~~~l~~~~~~~~~~LR~~VFv~Eqg~~~~~~~~~~E~D~~D~~~~h~lv~~~~~g~~vgt~Rll~~~~~~~l~~~f~~l~ 87 (201)
T 3p2h_A 8 AGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKMERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQEVFPHLL 87 (201)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTSCCSCCCCSSCCCCCTTCCTTCEEEEEECTTSCEEEEEEEEETTSCCHHHHTCGGGC
T ss_pred cccCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccCCCCCCCEEEEEEcCCCeEEEEEEeccccCCccccccChhhc
Confidence 4556677778888887774433 33222 223333332234555654 68999999998632
Q ss_pred ------CCCeEEEEEEEEcccC-cC----CcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEe
Q 007275 510 ------KEKCGEVAAIGVSPEC-RG----QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 569 (609)
Q Consensus 510 ------~~~~~eI~~iaV~p~~-Rg----qGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~ 569 (609)
....+++.+++|+|+| |+ .+.+..||..++++|+++|++.+++.+ ..+.+||+++||...
T Consensus 88 ~~~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~~~~~~~a~~~g~~~~~~~aq~~~~~~y~rlG~~~~ 159 (201)
T 3p2h_A 88 ADEAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQLIGVTFCSMERMFRRIGVHAH 159 (201)
T ss_dssp SSCCCCCTTEEEEEEEEEC----------CTTHHHHHHHHHHHHHHTTCSEEEEEEEHHHHHHHHHHTCEEE
T ss_pred CCccCCCCCEEEEEEEEEcchhcccccccChHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 1467899999999999 64 335999999999999999999999888 588999999999853
|
| >1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.1e-07 Score=80.75 Aligned_cols=69 Identities=14% Similarity=0.062 Sum_probs=57.1
Q ss_pred EEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHH-HHHHCC-CeE
Q 007275 499 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSRG-FRE 568 (609)
Q Consensus 499 IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~-fYek~G-F~~ 568 (609)
.+|++.+....++..++|..++|+|+|||||+|++||+.++++|++.|++.+.+ +..+.+ ||+|+. |..
T Consensus 22 ~vG~i~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l-~~~~~~~f~~k~~~~~~ 92 (103)
T 1xmt_A 22 HEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPS-CSYVSDTFLPRNPSWKP 92 (103)
T ss_dssp SSSEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTCEEEEC-SHHHHHTHHHHCGGGGG
T ss_pred cEEEEEEEEcCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCeEEEE-ehhhhHHHHHhChhHHh
Confidence 578888874433458999999999999999999999999999999999987754 456777 999984 653
|
| >1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A | Back alignment and structure |
|---|
Probab=98.40 E-value=3.4e-07 Score=91.00 Aligned_cols=83 Identities=11% Similarity=0.115 Sum_probs=69.7
Q ss_pred CeEEEEEECCEEEEEEEEEEecC-------------------CCeEEEEEEEEcccCcCCc-------HHHHHHHHHHHH
Q 007275 488 DSFYVVEREGQIIACAALFPFFK-------------------EKCGEVAAIGVSPECRGQG-------QGDKLLDYIEKK 541 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~-------------------~~~~eI~~iaV~p~~RgqG-------iG~~LL~~l~~~ 541 (609)
..+++..+++++||++.+.+... +. ++|.+++|+|+ |++| ++..||..++++
T Consensus 72 ~~hll~~~~g~~Vgt~RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~~al~~~ 149 (230)
T 1kzf_A 72 TRYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLFLAMVNW 149 (230)
T ss_dssp CEEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHHHHHHHH
T ss_pred CeEEEEEcCCeEEEEEeecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHHHHHHHH
Confidence 34566667999999999986321 23 79999999999 8887 999999999999
Q ss_pred HHHCCCCEEEEEe-HHHHHHHHHCCCeE--eeee
Q 007275 542 AASLGLDMLFLLT-TRTADWFKSRGFRE--CSIE 572 (609)
Q Consensus 542 A~~~G~~~I~l~t-~~a~~fYek~GF~~--~~~~ 572 (609)
|++.|++.+++.+ ..+.+||+++||.. .+..
T Consensus 150 a~~~G~~~l~~~aq~~~~~fy~r~G~~~~~~G~~ 183 (230)
T 1kzf_A 150 AQNNAYGNIYTIVSRAMLKILTRSGWQIKVIKEA 183 (230)
T ss_dssp HHHTTCSEEEEEEEHHHHHHHHHHCCCCEEEEEE
T ss_pred HHHCCCCEEEEEeCHHHHHHHHHcCCCeEECCCC
Confidence 9999999999988 57899999999974 5544
|
| >3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.39 E-value=2.3e-07 Score=87.16 Aligned_cols=118 Identities=9% Similarity=0.036 Sum_probs=80.7
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHhhccCccCC---HHHHHhh-----cCeEEEE-E-ECCEEEEEEEEEEecCCCeEE
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT---DEELLKA-----LDSFYVV-E-REGQIIACAALFPFFKEKCGE 515 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~---~e~l~~~-----i~~~~V~-~-~dg~IVG~~~l~~~~~~~~~e 515 (609)
.....|||++++|++.+..+++.. ..+..... .+..... -...|.+ . .++++||++.+. .....++
T Consensus 11 ~~rl~LR~~~~~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~--~~~~~~e 86 (176)
T 3shp_A 11 GPTVYLRAMVEDDKHHAAAWFDSR--FPVNAARAEAFLKEKLQGDPWDARWHLLAIVRRSDEAVVGSCRIE--FGKQTAS 86 (176)
T ss_dssp CSSEEEEECCHHHHHHGGGTCCCS--CCSCSSSCCCCCCGGGGCCGGGCEEEEEEEEETTTCCEEEEEEEE--ECSSEEE
T ss_pred cCeEEEeeCCHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhhcCccccCceEEEEEECCCCcEEEEEEEe--cCCCEEE
Confidence 344679999999999888866521 11100000 0111111 0123433 3 478999999993 3456788
Q ss_pred EEEE----EE-cccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 516 VAAI----GV-SPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 516 I~~i----aV-~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|+ + .+ +|+||| +.++..+++++.+ .++++|.+.+ .+++++|+|+||+..+..
T Consensus 87 ig-~~~~~~i~~~~~~G----~ea~~~ll~~af~~~~~~~i~~~v~~~N~~s~~l~ek~GF~~~G~~ 148 (176)
T 3shp_A 87 LR-FHMAPWLDDADVLR----AEALELVVPWLRDEHELLVITVEIAADEQRTLAAAEAAGLKAAVRM 148 (176)
T ss_dssp EE-EEECTTCSCHHHHH----HHHHHHHHHHHHHHSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EE-EeecceecChhHhh----HHHHHHHHHHHHhhCCeEEEEEEEcCCCHHHHHHHHHCCCEEEEEe
Confidence 84 4 45 899988 8888999999964 7999999988 489999999999998865
|
| >1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.16 E-value=5e-06 Score=86.11 Aligned_cols=101 Identities=8% Similarity=0.219 Sum_probs=73.3
Q ss_pred cccccCCcCCHHHHHHHHhhhH-------hhccCccCCHHHHHhhcCeEEEEEE-CCEEEEEEEEEEecC----------
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLV-------ESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFK---------- 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~-------~~~~~~~~~~e~l~~~i~~~~V~~~-dg~IVG~~~l~~~~~---------- 510 (609)
..|+.++.+| +.+..|++... +.+..... ++ .....++|.+. ++.+||++++++++.
T Consensus 134 ~eI~~a~~~D-~~~~~L~~r~q~~~l~fIE~~~~id~--dd--~~w~~~~v~e~~~~~ivG~~t~y~~~~~~~~~~f~~~ 208 (320)
T 1bob_A 134 FVVYKSSLVD-DFARRMHRRVQIFSLLFIEAANYIDE--TD--PSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDED 208 (320)
T ss_dssp EEEEEECSCS-HHHHHHHHHHTHHHHHHSTTCCCCCT--TC--TTEEEEEEEETTTCCEEEEEEEEEECCC---------
T ss_pred EEEEEeccCC-HHHHHHHHHHHHHHHhcccCCcccCc--cC--CCceEEEEEEccCCcEEEEEEEEeeeccCCccccccc
Confidence 5699999999 99999887531 11111111 11 22245666665 789999999986432
Q ss_pred ---CCeEEEEEEEEcccCcCCcHHHHHHHHHH-HHHHHCCCCEEEEEe
Q 007275 511 ---EKCGEVAAIGVSPECRGQGQGDKLLDYIE-KKAASLGLDMLFLLT 554 (609)
Q Consensus 511 ---~~~~eI~~iaV~p~~RgqGiG~~LL~~l~-~~A~~~G~~~I~l~t 554 (609)
....+|..+.|.|.|||+|+|++|++.++ .+++..++..|.+.-
T Consensus 209 ~~~~~R~rIsq~lVlPpyQgkGiG~~Ll~~i~~~~~~~~~i~~ItVeD 256 (320)
T 1bob_A 209 IDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVED 256 (320)
T ss_dssp CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESS
T ss_pred ccCCceEEEEEEEEcHHHhCCCHHHHHHHHHHHHHHhcCCCceEEEEC
Confidence 33578999999999999999999999999 566667888887754
|
| >1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8 | Back alignment and structure |
|---|
Probab=98.08 E-value=1.4e-05 Score=83.08 Aligned_cols=146 Identities=14% Similarity=0.142 Sum_probs=88.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHH-----------hhc-----C-eEEEEEE--CCEEEEEEEEEEe-
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-----------KAL-----D-SFYVVER--EGQIIACAALFPF- 508 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~-----------~~i-----~-~~~V~~~--dg~IVG~~~l~~~- 508 (609)
..|||++.+|+++|.++....-..-...+.+.+.+. ... . .++|+++ +|+|||++.+...
T Consensus 4 ~~IRpa~~~Dl~aL~~La~e~G~G~tsLP~d~e~L~~rI~~S~~sf~~~~~~~~~~~ylfVlED~~~g~VVG~~gI~a~v 83 (342)
T 1yle_A 4 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 83 (342)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred eEEecCCHHHHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEECCCCEEEEEEEEEEec
Confidence 359999999999999987654211111233333332 211 2 3567775 6999999976432
Q ss_pred ----------------------------------cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH---CCCCEEE
Q 007275 509 ----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS---LGLDMLF 551 (609)
Q Consensus 509 ----------------------------------~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~---~G~~~I~ 551 (609)
+-.+..+|+.++|+|+||++|+|+.|.+...-...+ +--+++.
T Consensus 84 G~~~PfY~yr~~t~v~~S~~L~v~~~~~~L~L~~d~tg~sEl~tLfl~p~~R~~G~G~lLS~~R~lfiA~~~~rF~~~v~ 163 (342)
T 1yle_A 84 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVV 163 (342)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEE
T ss_pred CCCccceeeeecceeeeccccccccccceEEeecCCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHChhhhhhhhh
Confidence 014678899999999999999999999988776643 4566777
Q ss_pred EEe------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCC
Q 007275 552 LLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598 (609)
Q Consensus 552 l~t------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~ 598 (609)
..- ...-+||+..|=.-.+.+. ...+ |-..-.++-|+..|.|.
T Consensus 164 AEmrG~~De~G~SPFW~~lg~~Ff~mdF-~~AD---~lsg~~~k~FIaeLmP~ 212 (342)
T 1yle_A 164 VEIVGYSDEQGESPFWNAVGRNFFDLNY-IEAE---KLSGLKSRTFLAELMPH 212 (342)
T ss_dssp EECCBCCCTTCCCHHHHHTGGGTSCCCH-HHHH---HHHHHC----------C
T ss_pred eeccCccCCCCCCccHhHhhcccCCCCH-HHHH---HHhcCCCcchHHHHCCC
Confidence 765 2346899988866555542 2111 11123466777776664
|
| >3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00011 Score=66.38 Aligned_cols=81 Identities=11% Similarity=0.149 Sum_probs=67.8
Q ss_pred eEEEEEECCEEEEEEEEEEec-CCCeEEEEEEEEcccCcCCc---HHHHHHHHHHHHHH-HCCCCEEEEEe--HHHHHHH
Q 007275 489 SFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQG---QGDKLLDYIEKKAA-SLGLDMLFLLT--TRTADWF 561 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~-~~~~~eI~~iaV~p~~RgqG---iG~~LL~~l~~~A~-~~G~~~I~l~t--~~a~~fY 561 (609)
.|.+-..++++||.+.+...+ .+..+++ .+.+.++ |+| +|+..+..+++++. ++++++|.+.+ .++.+.|
T Consensus 21 ~fiI~~~~~~~IG~i~i~~Id~~nr~a~i-~I~Igk~--gkG~~~ygtEAl~l~l~y~F~elnlhKi~l~v~~~~ai~~y 97 (135)
T 3dns_A 21 EYLITDKYGITIGRIFIVDLNKDNRFCMF-RMKIYKQ--GKSINTYIKEILSVFMEFLFKSNDINKVNIIVDEEVSTQPF 97 (135)
T ss_dssp EEEEEETTCCEEEEEEEEEEETTTTEEEE-EEEECCC--SSCCHHHHHHHHHHHHHHHHHHSCCSEEEEEEETTSCSHHH
T ss_pred EEEEECCCCCEEEEEEEEEeccccCEEEE-EEEEeeC--CCChHHHHHHHHHHHHHHHHHhcCceEEEEEEecHHHHHHH
Confidence 344444579999999998755 4577888 7777766 999 99999999999996 58999999988 5899999
Q ss_pred HHCCCeEeeee
Q 007275 562 KSRGFRECSIE 572 (609)
Q Consensus 562 ek~GF~~~~~~ 572 (609)
+++||+..+..
T Consensus 98 eKlGF~~EG~l 108 (135)
T 3dns_A 98 VELGFAFEGII 108 (135)
T ss_dssp HHTTCEEEEEE
T ss_pred HHcCCeEeeee
Confidence 99999999876
|
| >2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.038 Score=57.03 Aligned_cols=57 Identities=12% Similarity=0.264 Sum_probs=46.4
Q ss_pred EEEEEEEEEEec---CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe
Q 007275 498 QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT 554 (609)
Q Consensus 498 ~IVG~~~l~~~~---~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t 554 (609)
.++||++.+.++ +.....|..+.|.|.|||+|+|++|++.+-+.+.. ..+..|.+.-
T Consensus 200 ~~vGy~T~Y~f~~yp~~~R~RISQ~LILPPyQ~kG~G~~Ll~~iy~~~~~~~~v~eiTVED 260 (324)
T 2p0w_A 200 ATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAED 260 (324)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTCTTBCCBEESS
T ss_pred EEEEEEEEEEeeecCCcccceeEEEEEcCcccccCcHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 589999987653 33457899999999999999999999999999986 4566665543
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.098 Score=52.33 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=65.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~ 525 (609)
..+|+++..| +.+.++...... ..+ ...+..|+ ..+.++ ++ +||+.+.+ ..|+.++.
T Consensus 159 ~~v~~~~~~d-~~l~~~d~~~~~----~~r-~~~l~~~~~~~~~~~~~--~~--~Gy~~~r~------~~igp~~a---- 218 (288)
T 3ddd_A 159 EGVVEVNKIP-NWVKEIDKKAFG----DDR-IRVLEAYMRRGARLLCA--EN--EGFGLVYR------GKIGPLVA---- 218 (288)
T ss_dssp CSEEEESSCC-HHHHHHHHHHHS----SCC-HHHHHHHHHTTCEEEEE--TT--TEEEEEET------TEEEEEEE----
T ss_pred cceeEcccCc-HHHHHHhHHhCC----ccH-HHHHHHHHcCCCcEEEE--cC--ceEEEEee------cccccccc----
Confidence 3689999999 988887544322 111 12233333 344445 34 99998764 44555553
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 526 RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++.++++.|+..+.+. |. +.+.+ ..+.+||+++||+.+...
T Consensus 219 ~~~~~a~~Ll~~l~~~----g~--~~ldv~~~n~~a~~l~~~~Gf~~~~~~ 263 (288)
T 3ddd_A 219 DSPRVAEKILLKAFQL----GA--REIIIPEVNKDALELIKIFKPSQVTSC 263 (288)
T ss_dssp SSHHHHHHHHHHHHHT----TC--CEEEEETTCHHHHHHHGGGCCEEEEEE
T ss_pred CCHHHHHHHHHHHHhC----CC--EEEEecCCCHHHHHHHHHcCCeEeeeE
Confidence 7789999999999887 44 56665 257999999999987543
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=91.87 E-value=0.46 Score=49.95 Aligned_cols=94 Identities=19% Similarity=0.141 Sum_probs=64.7
Q ss_pred CHHHHHHHHhhhHhhc----cCccCCHHHHHhhcC------eE-EEEE--ECCEEEEEEEEEEec---C---CCeEEEEE
Q 007275 458 DLSGIKQIIQPLVESG----ALVRRTDEELLKALD------SF-YVVE--REGQIIACAALFPFF---K---EKCGEVAA 518 (609)
Q Consensus 458 D~~~I~~L~~~~~~~~----~~~~~~~e~l~~~i~------~~-~V~~--~dg~IVG~~~l~~~~---~---~~~~eI~~ 518 (609)
++.++..+++..+-+. |....+.+-+...+. .+ ..+. .++++|||+.-.|.. . -...+|.-
T Consensus 58 ~l~evy~lL~~nYVED~d~~FRf~YS~efL~WaL~~Pg~~~~whiGVR~~~~~kLVgfIsaiP~~irv~~~~~~~~eINF 137 (385)
T 4b14_A 58 DRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNF 137 (385)
T ss_dssp HHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHHHHhhccCCCcceEeccCCHHHHhhhhcCCCCCcceEEEEEEccCCeEEEEEeeeEEEEEEeceEeeeEEEEE
Confidence 3455555555533222 223456666655552 12 2222 479999999987631 1 25689999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 551 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~ 551 (609)
+|||+++|+++++-.|++++.+++...|+-+-.
T Consensus 138 LCVHKklRsKrlAPvLIkEitRR~n~~gI~qAv 170 (385)
T 4b14_A 138 LCVHKTLRSKRLAPVLIKEITRRINLENIWQAI 170 (385)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHTTTCCEEE
T ss_pred EEEehhHhccCccHHHHHHHHHHhhccCceEEE
Confidence 999999999999999999999999999976543
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=91.43 E-value=0.85 Score=47.90 Aligned_cols=118 Identities=18% Similarity=0.204 Sum_probs=83.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhcC------eEEEEEECCEEEEEEEEEEecC-----C-----
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK-----E----- 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i~------~~~V~~~dg~IVG~~~l~~~~~-----~----- 511 (609)
..+|+++++|++++.++++.... .......+.+++..|+. ..||++++|+|.+|+.++..+. .
T Consensus 226 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~ee~~Hw~lp~~~Vi~syVve~~~~itdf~SFY~lps~vi~~~k~~~l 305 (385)
T 4b14_A 226 KNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTL 305 (385)
T ss_dssp TTCEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEECCEEESSCSSCSEE
T ss_pred CccccCcHhhHHHHHHHHHHHHhcCCeeEecCHHHeeeeeecCCCeEEEEEECCCCcEeEEEEEEEcceeeeCCCCccee
Confidence 35999999999999999987543 33445678999998872 3678899999999999974321 1
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
..+++ -..+... ---..||..++-.|++.|+....+.. -....|.+++.|..-+-
T Consensus 306 ~~AY~-fY~~~~~----~~l~~l~~dali~ak~~~fDVfnaL~~~~N~~fl~~lkF~~GdG 361 (385)
T 4b14_A 306 NAAYS-FYNVTTT----ATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDG 361 (385)
T ss_dssp CEEEE-CCCEESS----SCHHHHHHHHHHHHHHTTCSEEEEESCTTGGGGTTTTTCEEEEE
T ss_pred eeEeE-EEeeecC----ccHHHHHHHHHHHHHHCCCCEEEeccccchHHHHHHcCCCCCCC
Confidence 12232 1111111 12357999999999999998765554 34567999999987543
|
| >2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A | Back alignment and structure |
|---|
Probab=90.94 E-value=0.51 Score=47.16 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=39.1
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.+||+..-. ........+++|.|.|.||++|+|+.|++..=+..+..|.
T Consensus 131 h~vGYFSKE-K~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 179 (284)
T 2ozu_A 131 HLVGYFSKE-KHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQ 179 (284)
T ss_dssp EEEEEEEEE-SSCTTCEEESEEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeeeec-ccccccCcEEEEEecChhHhccHhHHHHHHHHHHhhhcCc
Confidence 578876554 2223457899999999999999999999999998887763
|
| >3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A* | Back alignment and structure |
|---|
Probab=90.76 E-value=0.5 Score=47.01 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=39.2
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.++||..-.. .......++||.|.|.||++|+|+.|++..=+..+..|.
T Consensus 126 h~vGyFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 174 (276)
T 3to7_A 126 HLVGYFSKEK-ESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENK 174 (276)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred eecccccccc-cccCCCeEEEEEecChHHcCCccceeehheeeeeeccCC
Confidence 5788776552 223446799999999999999999999999988887763
|
| >4hkf_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase, MEC-17, GNAT, acetyl-COA, GNAT FO transferase; HET: ACO; 1.70A {Danio rerio} PDB: 4h6u_A* 4h6z_A* | Back alignment and structure |
|---|
Probab=90.67 E-value=1.2 Score=42.20 Aligned_cols=93 Identities=13% Similarity=0.165 Sum_probs=57.7
Q ss_pred hccCcc-CCHHHHHhhcCeEEEEEEC------CEEEEEEEEEE-----ecC-C-----CeEEEEEEEEcccCcCCcHHHH
Q 007275 472 SGALVR-RTDEELLKALDSFYVVERE------GQIIACAALFP-----FFK-E-----KCGEVAAIGVSPECRGQGQGDK 533 (609)
Q Consensus 472 ~~~~~~-~~~e~l~~~i~~~~V~~~d------g~IVG~~~l~~-----~~~-~-----~~~eI~~iaV~p~~RgqGiG~~ 533 (609)
.+...+ -+.+.+...-+..|+..+. +.++|+.-+-+ .+. + ....|-+++|++.+|++|+|++
T Consensus 55 Q~L~~piTs~~rl~~~~~~lYll~d~~~~~g~g~viG~LKvG~K~Lf~~d~~g~~~e~~~lcIlDFyV~es~QR~G~Gk~ 134 (191)
T 4hkf_A 55 QQLPAPITSAAKLQANRHHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLDFYVTETLQRHGYGSE 134 (191)
T ss_dssp TTCSSCSCCHHHHHHSCCEEEEEEETTHHHHTCEEEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHHHH
T ss_pred cCCCCCccCHHHhccCCceEEEEecccccCCCceEEEEEEecCcceEEEcCCCCEEEEeccEEEeEEEeeeeeccCHHHH
Confidence 344433 3566676655666666553 47999876532 222 1 2356779999999999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEEe----HHHHHHHHH-CCCe
Q 007275 534 LLDYIEKKAASLGLDMLFLLT----TRTADWFKS-RGFR 567 (609)
Q Consensus 534 LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek-~GF~ 567 (609)
|++++.+. .++..+.+.. .....|..| +|+.
T Consensus 135 lfe~mL~~---e~i~p~rvA~DnPS~k~l~Fl~Khy~l~ 170 (191)
T 4hkf_A 135 LFDFMLKH---KQVEPAQMAYDRPSPKFLSFLEKRYDLR 170 (191)
T ss_dssp HHHHHHHH---HTCCGGGSEEESCCHHHHHHHHHHHCCC
T ss_pred HHHHHHHh---cCCcceeeecCCchHHHHHHHHhccCcc
Confidence 99988654 3343333322 245677666 3554
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=90.65 E-value=1.1 Score=47.32 Aligned_cols=118 Identities=16% Similarity=0.169 Sum_probs=84.0
Q ss_pred cccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhcC------eEEEEEECCEEEEEEEEEEecC----C------
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK----E------ 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i~------~~~V~~~dg~IVG~~~l~~~~~----~------ 511 (609)
..+|+++++|++++.+|++.... ......++.+++..|+. ..||++.+|+|-+|+.++-.+. .
T Consensus 262 ~glR~m~~~Dvp~v~~LL~~yl~~f~la~~ft~eev~Hw~lp~~~Vi~tYVvE~~g~ITDf~SFY~Lpstvi~~~~~~~l 341 (421)
T 2wuu_A 262 SGLREMKPSDVPQVRRILMNYLDNFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNIL 341 (421)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSBEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEEEEEEEC------CE
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHhccCcCCceEEEEEeCCCcEeeEEEEEEcceeecCCCcchhh
Confidence 35999999999999999887544 34446788999999873 3578888999999999974322 1
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
..+++ -..+.... -=.+||..++-.|++.|+....+.. -....|.+.+.|..-+-
T Consensus 342 ~aAY~-fY~~~t~~----~l~~Lm~DaLi~Ak~~gfDVfNaL~~mdN~~fL~~lKFg~GdG 397 (421)
T 2wuu_A 342 NAAYV-HYYAATSM----PLHQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDG 397 (421)
T ss_dssp EEEEE-EEEEESSS----CHHHHHHHHHHHHHHTTCCEEEEESCTTGGGGTTTTTCEEEEE
T ss_pred hhhhh-hhhccCCc----cHHHHHHHHHHHHHHcCCcEEecccccccHHHHHhCCCCCCCC
Confidence 12333 22332222 2467999999999999998765554 35566889999987543
|
| >2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.31 E-value=0.44 Score=47.67 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=39.3
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.+||+..--. .......++||.|.|.||++|+|+.||+..=+..+..|.
T Consensus 124 h~vGYFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 172 (280)
T 2ou2_A 124 HIVGYFSKEK-ESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGK 172 (280)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEeeccc-cCccccceEEEEecchHHhcchhHHHHHHHHHHHHhhCc
Confidence 5788776552 223457899999999999999999999999888887764
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=89.97 E-value=0.61 Score=48.70 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=64.5
Q ss_pred CHHHHHHHHhhhHhh----ccCccCCHHHHHhhcC------eEE-EEE--ECCEEEEEEEEEEec---C---CCeEEEEE
Q 007275 458 DLSGIKQIIQPLVES----GALVRRTDEELLKALD------SFY-VVE--REGQIIACAALFPFF---K---EKCGEVAA 518 (609)
Q Consensus 458 D~~~I~~L~~~~~~~----~~~~~~~~e~l~~~i~------~~~-V~~--~dg~IVG~~~l~~~~---~---~~~~eI~~ 518 (609)
++.++..|++..+-+ .|.-.++.+-+...+. .+. .+. .++++|||++-.|.. . -...+|.-
T Consensus 55 ~l~ely~lL~~nYVEDdd~~FRF~YS~efL~WaL~pPg~~~~whvGVR~~~s~kLVgfIsaiP~~irv~~~~~~~~eINF 134 (383)
T 3iu1_A 55 VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINF 134 (383)
T ss_dssp HHHHHHHHHHHHSCBCTTSCEEECCCHHHHHHHHSSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHHHHhccccCCcceEEeeCCHHHHHHhccCCCCCcceEEEEEEccCCeEEEEEecceEEEEEcceEeeeeEEEE
Confidence 445556665553322 2334567777666552 122 222 379999999877631 1 24689999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCE
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~ 549 (609)
+|||++.|.++++--|++++.+++...|+-+
T Consensus 135 LCVhKkLRsKrLAPvLIkEITRRvn~~gI~q 165 (383)
T 3iu1_A 135 LCVHKKLRSKRVAPVLIREITRRVHLEGIFQ 165 (383)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHTTTCCC
T ss_pred EEEcHhHHhCCCcHHHHHHHHHHhhhcchhh
Confidence 9999999999999999999999999988754
|
| >2pq8_A Probable histone acetyltransferase MYST1; MOF, structural genomics, structural genomics consortium, SGC; HET: COA; 1.45A {Homo sapiens} PDB: 2giv_A* 3qah_A* 2y0m_A* 3toa_A* 3tob_A* | Back alignment and structure |
|---|
Probab=89.66 E-value=0.68 Score=46.29 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=39.3
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.+||+..-. ........++||.|.|.||++|+|+.||+..=+..+..|.
T Consensus 126 h~vGYFSKE-K~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 174 (278)
T 2pq8_A 126 HIVGYFSKE-KESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLEST 174 (278)
T ss_dssp EEEEEEEEE-TTCTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEeecc-ccccccCceEEEEecChhhccchhHHHHHHHHHHHhhcCc
Confidence 578876654 2233457899999999999999999999999888887664
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=89.51 E-value=0.51 Score=47.34 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=42.8
Q ss_pred CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-----CCCEEEEEe
Q 007275 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-----GLDMLFLLT 554 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-----G~~~I~l~t 554 (609)
..+|.+++++++||+++++ .+ . .+-.++|+|.||.+| +.|...+ .+.. +++.++..+
T Consensus 43 ~~~~~~~~~~~~~G~~~v~--~~--~-~~~~~~~~~~~~~~~--~~lf~~~---~~~~~~~~~~i~~~f~~~ 104 (276)
T 3iwg_A 43 AKHFGFYVNKNLVGFCCVN--DD--G-YLLQYYLQPEFQLCS--QELFTLI---SQQNSSVIGEVKGAFVST 104 (276)
T ss_dssp SEEEEEEETTEEEEEEEEC--TT--S-EEEEEEECGGGHHHH--HHHHHHH---HTTCCTTTCCCCEEEEET
T ss_pred ceEEEEEECCEEEEEEEEc--CC--c-eeeEEEecHHHHhhH--HHHHHHH---HhcCCccceecCccccCc
Confidence 6789999999999999997 22 2 555999999999876 6664333 3445 678887765
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=88.18 E-value=1.5 Score=45.83 Aligned_cols=92 Identities=14% Similarity=0.175 Sum_probs=64.6
Q ss_pred CHHHHHHHHhhhHhh----ccCccCCHHHHHhhcC------eEE-EEE--ECCEEEEEEEEEEe---cCCC-----eEEE
Q 007275 458 DLSGIKQIIQPLVES----GALVRRTDEELLKALD------SFY-VVE--REGQIIACAALFPF---FKEK-----CGEV 516 (609)
Q Consensus 458 D~~~I~~L~~~~~~~----~~~~~~~~e~l~~~i~------~~~-V~~--~dg~IVG~~~l~~~---~~~~-----~~eI 516 (609)
++.++..+++.-+-+ -|...++.+-+...+. .+. .+. .++++|||+.-.|. ..+. ..+|
T Consensus 36 ~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv~~~~~~~~~~eI 115 (392)
T 1iyk_A 36 QLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEI 115 (392)
T ss_dssp HHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTTTEEEEEEEE
T ss_pred HHHHHHHHHHhCcccCCCCceeeeCCHHHHhhhccCCCCccceEEEEEEcCCCcEEEEEeeeeEEEEEcCcCceEEEEEE
Confidence 345666666554322 2234567776665551 222 222 46899999988762 1233 6899
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCE
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~ 549 (609)
.-+|||++.|.++++--|++++.+++...|+-+
T Consensus 116 NFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~Q 148 (392)
T 1iyk_A 116 NFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQ 148 (392)
T ss_dssp EEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCC
T ss_pred EEEEEcHhHhhcCCcHHHHHHHHHHhhhcccee
Confidence 999999999999999999999999999988754
|
| >4b5o_A Alpha-tubulin N-acetyltransferase; microtubules, cilium, intraflagellar transport; HET: ACO; 1.05A {Homo sapiens} PDB: 4b5p_A* | Back alignment and structure |
|---|
Probab=87.93 E-value=2.1 Score=40.67 Aligned_cols=92 Identities=12% Similarity=0.193 Sum_probs=54.9
Q ss_pred hhccCcc-CCHHHHHhhcCeEEEEEEC-------CEEEEEEEEE-----EecC-CCe-----EEEEEEEEcccCcCCcHH
Q 007275 471 ESGALVR-RTDEELLKALDSFYVVERE-------GQIIACAALF-----PFFK-EKC-----GEVAAIGVSPECRGQGQG 531 (609)
Q Consensus 471 ~~~~~~~-~~~e~l~~~i~~~~V~~~d-------g~IVG~~~l~-----~~~~-~~~-----~eI~~iaV~p~~RgqGiG 531 (609)
..+...+ -+.+.+...-+..|+..+. +.++|+.-+- .++. ... ..|-++||++.+|++|+|
T Consensus 61 AQgL~~~ITs~~kl~~~d~~lYll~d~~~~~~~~~~v~G~LKvG~K~Lfl~d~~g~~~e~~~lCvLDFYVhEs~QR~G~G 140 (200)
T 4b5o_A 61 AQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGHG 140 (200)
T ss_dssp HTTCSSCSCCHHHHHHSCCEEEEEECTTCCCC----EEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHH
T ss_pred HcCCCCCccCHHHhccCCcEEEEEeecccccCCCceEEEEEEEeeeeeEEECCCCCEEEeecceEEEEEechhhhhcCcH
Confidence 3344433 3566676555666666542 4688987432 1222 222 335599999999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHH
Q 007275 532 DKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS 563 (609)
Q Consensus 532 ~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek 563 (609)
++|.+++++.-. .....+-.+- .....|..|
T Consensus 141 k~LF~~ML~~e~-~~p~~la~DrPS~Kll~FL~K 173 (200)
T 4b5o_A 141 RELFQYMLQKER-VEPHQLAIDRPSQKLLKFLNK 173 (200)
T ss_dssp HHHHHHHHHHHT-CCGGGCEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CChhhccccCCCHHHHHHHHH
Confidence 999999998532 2233444443 345666665
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=87.49 E-value=2.4 Score=44.29 Aligned_cols=119 Identities=15% Similarity=0.164 Sum_probs=82.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhcC------eEEEEEE-CCEEEEEEEEEEecC-----CCeEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFK-----EKCGE 515 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i~------~~~V~~~-dg~IVG~~~l~~~~~-----~~~~e 515 (609)
..+|+++++|++++..|++.... .......+.+++..|+. ..||+++ +|+|-.|+.++-.+. ...-.
T Consensus 223 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~ft~eev~Hw~lp~~~Vi~syVve~~~g~ITDf~SFY~Lpstvl~~~~~~~ 302 (383)
T 3iu1_A 223 AGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKS 302 (383)
T ss_dssp TTEEECCGGGHHHHHHHHHHHGGGSSEEEECCHHHHHHHHSCC-CCEEEEEEECTTSCEEEEEEEEECCEEETTCSSCCE
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCCeeeCCHHHhhhhcccCCCeEEEEEEECCCCcEeeEEEEEEccceecCCCCcce
Confidence 35999999999999999987543 34446689999999983 2466765 689999999874321 11222
Q ss_pred EEEEE----EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 516 VAAIG----VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 516 I~~ia----V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
|..-+ +...- -=..||..++-.|++.|+....+.. -....|.+.+.|-.-+-
T Consensus 303 l~aAY~fY~~~t~~----~l~~Lm~DaLi~Ak~~gfDVFNaL~~m~N~~fL~~lKFg~GdG 359 (383)
T 3iu1_A 303 LKAAYSFYNVHTQT----PLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDG 359 (383)
T ss_dssp ECEEEECCCBCSSS----CHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEEE
T ss_pred eeeEEEEEEeecCC----CHHHHHHHHHHHHHHcCCeEEEcccccccHHHHHHcCCCCCCC
Confidence 22111 11111 1357899999999999998876655 35567889999977543
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=87.33 E-value=1.8 Score=45.58 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=64.6
Q ss_pred CCHHHHHHHHhhhHhh----ccCccCCHHHHHhhcC------eEEE-EE--ECCEEEEEEEEEEe---c-----------
Q 007275 457 TDLSGIKQIIQPLVES----GALVRRTDEELLKALD------SFYV-VE--REGQIIACAALFPF---F----------- 509 (609)
Q Consensus 457 ~D~~~I~~L~~~~~~~----~~~~~~~~e~l~~~i~------~~~V-~~--~dg~IVG~~~l~~~---~----------- 509 (609)
+++.++..|++.-+-+ -|...++.+-+...+. .+.+ +. .++++|||+.-.|. .
T Consensus 67 ~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~~~whiGVR~~~~~kLVgFIsgiP~~irv~~~~~~~~~~~ 146 (421)
T 2wuu_A 67 DDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPSYIPDWHVAVRRKADKKLLAFIAGVPVTLRMGTPKYMKVKAQ 146 (421)
T ss_dssp HHHHHHHHHHHHHSCC---CCEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTCCEEEEEEEEEEEEECSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhcCCCCCCcceEEEEEEccCCcEEEEEeeeeEEEEeccccccccccc
Confidence 3355666666553322 2334567776665551 2222 22 47899999987662 1
Q ss_pred ----------CC---CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCE
Q 007275 510 ----------KE---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549 (609)
Q Consensus 510 ----------~~---~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~ 549 (609)
.+ ...+|.-+|||++.|+++++--|++.+.+++...|+-+
T Consensus 147 ~~~~~~~~~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~q 199 (421)
T 2wuu_A 147 EKGQEEEAAKYDAPRHICEINFLCVHKQLREKRLAPILIKEVTRRVNRTNVWQ 199 (421)
T ss_dssp HTTCHHHHHTTCSCEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccchhcccceeeeeeEEEEEechhHhhccCcHHHHHHHHHHhhhcchhh
Confidence 11 35789999999999999999999999999999988754
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=86.82 E-value=1.2 Score=47.15 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=64.3
Q ss_pred HHHHHHHHhhhHhh----ccCccCCHHHHHhhcC------eEE-EEE--ECCEEEEEEEEEEec----C--CCeEEEEEE
Q 007275 459 LSGIKQIIQPLVES----GALVRRTDEELLKALD------SFY-VVE--REGQIIACAALFPFF----K--EKCGEVAAI 519 (609)
Q Consensus 459 ~~~I~~L~~~~~~~----~~~~~~~~e~l~~~i~------~~~-V~~--~dg~IVG~~~l~~~~----~--~~~~eI~~i 519 (609)
+.++..|++.-+-+ -|...++.+-+...+. .+. .+. .++++|||+.-.|.. + -...+|.-+
T Consensus 59 l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv~~~~~~~~eINFL 138 (422)
T 1iic_A 59 LEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFL 138 (422)
T ss_dssp HHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred HHHHHHHHHhCcccCCCCceeeeCCHHHHHhhccCCCCccceEEEEEEccCCcEEEEEeceeEEEEEcceEEEeeEEEEE
Confidence 44666666553322 2335567776665551 222 222 478999999887631 1 246899999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCE
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDM 549 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~ 549 (609)
|||++.|.++++--|++.+.+++...|+-+
T Consensus 139 CVHKKLRsKRLAPVLIkEITRRvn~~gI~Q 168 (422)
T 1iic_A 139 CVHKQLRSKRLTPVLIKEITRRVNKCDIWH 168 (422)
T ss_dssp EECGGGTTSSCHHHHHHHHHHHHHTTTCCC
T ss_pred EechhhhhccCcHHHHHHHHHHhhhcchhe
Confidence 999999999999999999999999988754
|
| >4h6u_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase; HET: ACO; 2.45A {Danio rerio} PDB: 4h6z_A* | Back alignment and structure |
|---|
Probab=86.70 E-value=2.2 Score=40.56 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=44.6
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHH-CCCeEeeeecchhHhhhhcccCCCceeE
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS-RGFRECSIEMIPEERRKRINLSRNSKYY 591 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek-~GF~~~~~~~lp~~~~~~y~~~~~s~i~ 591 (609)
.|-++||++.+|++|+|++|.+++++.-. .....+-.+- ..-..|..| +|-.. +-++.++-+.
T Consensus 118 CvLDFYVhEs~QR~G~Gk~LF~~ML~~e~-~~p~~la~DrPS~Kll~FL~KhY~L~~-------------~ipQ~NnFVV 183 (200)
T 4h6u_A 118 CVLAFYVTETLQRHGYGSELFDFMLKHKQ-VEPAQMAYDRPSPKFLSFLEKRYDLRN-------------SVPQVNNFVV 183 (200)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHT-CCGGGSEEESCCHHHHHHHHHHSCCCC-------------BCCCSSSEEC
T ss_pred eeeeeeeehhhcccCcHHHHHHHHHHHcC-CChhHccccCCCHHHHHHHHHhcCCCc-------------cCCcCccEEE
Confidence 35599999999999999999999998532 2233443433 355677766 34433 2234555566
Q ss_pred EeecCCCCCCC
Q 007275 592 MKKLLPDTSGI 602 (609)
Q Consensus 592 mkkll~~~~g~ 602 (609)
....+.+.++-
T Consensus 184 f~~fF~~~~~~ 194 (200)
T 4h6u_A 184 FAGFFQSRSGT 194 (200)
T ss_dssp BGGGC------
T ss_pred ehHHhcCCCCC
Confidence 66677666653
|
| >3gkr_A FEMX; FEMX, peptidoglycan, hexapeptide, transferase, transferase- transferase product complex; HET: UMA; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A | Back alignment and structure |
|---|
Probab=86.54 E-value=6.1 Score=40.38 Aligned_cols=74 Identities=12% Similarity=0.004 Sum_probs=57.4
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-------HHHHHH
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-------RTADWF 561 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-------~a~~fY 561 (609)
.++++..+|++||.+.+... ++..+..-.+.+++ +..+-+..|.-.++++|.++|++..-+... ...+|-
T Consensus 230 ~l~~a~~~g~~vA~~l~~~~--~~~~~~~~~g~~~~-~~~~~~~ll~~~~i~~a~~~G~~~~Dfgg~~~~~~~~Gl~~FK 306 (336)
T 3gkr_A 230 RIFVAEREGKLLSTGIALKY--GRKIWYMYAGSMDG-NTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFK 306 (336)
T ss_dssp EEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECSS-CCTTHHHHHHHHHHHHHHHTTCSEEEEEECSCSSTTCHHHHHH
T ss_pred EEEEEEECCEEEEEEEEEEE--CCEEEEEeeeECch-hccChhHHHHHHHHHHHHHCCCCEEECcCCCCCCCCccHHHHh
Confidence 46778899999998877633 34555556777888 888999999999999999999998777541 345666
Q ss_pred HHCC
Q 007275 562 KSRG 565 (609)
Q Consensus 562 ek~G 565 (609)
+++|
T Consensus 307 ~~Fg 310 (336)
T 3gkr_A 307 HVFV 310 (336)
T ss_dssp HHHC
T ss_pred hcCC
Confidence 7766
|
| >4gs4_A Alpha-tubulin N-acetyltransferase; acetyl coenzyme A binding, cytosolic; HET: ACO; 2.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.12 E-value=2.2 Score=41.61 Aligned_cols=92 Identities=11% Similarity=0.170 Sum_probs=54.0
Q ss_pred hhccCcc-CCHHHHHhhcCeEEEEEEC-------CEEEEEEEEEE-----ecCC-C-----eEEEEEEEEcccCcCCcHH
Q 007275 471 ESGALVR-RTDEELLKALDSFYVVERE-------GQIIACAALFP-----FFKE-K-----CGEVAAIGVSPECRGQGQG 531 (609)
Q Consensus 471 ~~~~~~~-~~~e~l~~~i~~~~V~~~d-------g~IVG~~~l~~-----~~~~-~-----~~eI~~iaV~p~~RgqGiG 531 (609)
..+...+ -+.+.+...-+..|+..+. +.++|+.-+-. ++.. . ...|=++||++.+|++|+|
T Consensus 61 AQgL~~~ITS~~kl~~~d~~lYll~d~~~~~~g~~~v~G~LKvG~K~Lfl~d~~g~~~e~~plCvLDFYVhes~QR~G~G 140 (240)
T 4gs4_A 61 AQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGHG 140 (240)
T ss_dssp HTTCSSCSCCHHHHHTSCEEEEEEECC--------CEEEEEEEEECCEEEECTTSCEEEECCEEEEEEEECGGGTTSSHH
T ss_pred HcCCCCccccHHHHhcCCcEEEEEEecCCCCCCceeEEEEEEEeeeeeEEECCCCCEEEeccceEEEEEeecceeeeccH
Confidence 3344433 3466665544455555432 34788875421 2221 1 2334499999999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHH
Q 007275 532 DKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS 563 (609)
Q Consensus 532 ~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek 563 (609)
++|.+++++.-. .....+-.+- .....|..|
T Consensus 141 k~LF~~ML~~e~-~~p~~lA~DrPS~Kll~FL~K 173 (240)
T 4gs4_A 141 RELFQYMLQKER-VEPHQLAIDRPSQKLLKFLNK 173 (240)
T ss_dssp HHHHHHHHHHHT-CCGGGCEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCHhhccccCCCHHHHHHHHH
Confidence 999999998532 2333444443 345666655
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=84.08 E-value=5.1 Score=41.93 Aligned_cols=123 Identities=17% Similarity=0.165 Sum_probs=83.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhc----C-------eEEEEE-ECCEEEEEEEEEEecC----C
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL----D-------SFYVVE-REGQIIACAALFPFFK----E 511 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i----~-------~~~V~~-~dg~IVG~~~l~~~~~----~ 511 (609)
..+|+++++|++++.+|++.... ......++.+++..|+ . ..||++ ++|+|-.|+.++-.+. .
T Consensus 206 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~eev~Hw~lp~~~~~~~~Vi~tYVve~~~g~ITDf~SFY~Lpstv~~~ 285 (392)
T 1iyk_A 206 KGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDN 285 (392)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSC
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHHcccCCCCCCCceEEEEEEECCCCcEeeEEEEEECcccccCC
Confidence 35999999999999999988543 3444668899999887 2 257777 6899999999974221 1
Q ss_pred ------CeEEEEEEEEcccCcCC--cHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 512 ------KCGEVAAIGVSPECRGQ--GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 512 ------~~~eI~~iaV~p~~Rgq--GiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
..+++--.+-...+... --=..||..++-.|++.|+....+.. -....|.+.+.|..-+-
T Consensus 286 ~~~~~l~aAY~fY~~~~~~~~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~GdG 354 (392)
T 1iyk_A 286 AQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDG 354 (392)
T ss_dssp SSCSEECEEEEEEEEETTTTSTTHHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEEE
T ss_pred CccchhhhhhhhhccccccccccccchHHHHHHHHHHHHHHcCCcEEecccccccHHHHHHCCCCCCCC
Confidence 23444222222211111 02456888888889999998766655 35566889999987543
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=83.76 E-value=5 Score=42.35 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=84.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhc----C--------eEEEEE-ECCEEEEEEEEEEecC----
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL----D--------SFYVVE-REGQIIACAALFPFFK---- 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i----~--------~~~V~~-~dg~IVG~~~l~~~~~---- 510 (609)
..+|+++++|++++.+|++.... ......++.+++..|+ . ..||++ ++|+|-.|+.++-.+.
T Consensus 226 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~ft~eev~Hwflp~~~~~~~~~Vi~tYVvE~~~g~ITDf~SFY~Lpstv~~ 305 (422)
T 1iic_A 226 AGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILN 305 (422)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECS
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCCeeeCCHHHHHHHccCCCCCCCCCceEEEEEEECCCCcEeeEEEEEEccccccC
Confidence 35999999999999999988543 3444678899999887 2 257777 6899999999974221
Q ss_pred C------CeEEEEEEEEcccCcC--Cc----------HHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeee
Q 007275 511 E------KCGEVAAIGVSPECRG--QG----------QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 571 (609)
Q Consensus 511 ~------~~~eI~~iaV~p~~Rg--qG----------iG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~ 571 (609)
. ..+++--.+-...+.. .+ -=..||..++-.|++.|+....+.. -....|.+.+.|-.-+-
T Consensus 306 ~~kh~~l~aAY~fY~~~t~~~~~~~~~~~~~~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~GdG 385 (422)
T 1iic_A 306 NTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDG 385 (422)
T ss_dssp CSSCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEEE
T ss_pred CCccchhhhhhhhhheecccccccccccchhhhhhhhhHHHHHHHHHHHHHHcCCCEEecccccccHHHHHhCCCCCCCC
Confidence 1 2344422222222211 11 2457888888999999998776655 35566889999987543
|
| >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 | Back alignment and structure |
|---|
Probab=82.57 E-value=1.3 Score=47.66 Aligned_cols=91 Identities=16% Similarity=0.147 Sum_probs=64.3
Q ss_pred HHHHHHHHhhhHhh----ccCccCCHHHHHhhcC------eE-EEEE--ECCEEEEEEEEEEec------CCCeEEEEEE
Q 007275 459 LSGIKQIIQPLVES----GALVRRTDEELLKALD------SF-YVVE--REGQIIACAALFPFF------KEKCGEVAAI 519 (609)
Q Consensus 459 ~~~I~~L~~~~~~~----~~~~~~~~e~l~~~i~------~~-~V~~--~dg~IVG~~~l~~~~------~~~~~eI~~i 519 (609)
+..+..|++.-+-+ -|...++.+-+...+. .+ +.+. .++++|||+.-.|.. .-...+|.-+
T Consensus 169 l~Ely~LL~enYVEDdd~mFRF~YS~eFL~WaL~pPG~~k~WhiGVRv~~s~KLVgFIsgiP~~irv~~~~~~~~eINFL 248 (496)
T 1rxt_A 169 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFL 248 (496)
T ss_dssp HHHHHHHHHTSSCCCCSSCCCBCCCHHHHHHHHCCTTCCGGGSEEEECSSSSCEEEEECCEECCCCCSSSCCCCEECCCC
T ss_pred HHHHHHHHHhCcccCCCCceeeeCCHHHHHHhccCCCCccceEEEEEEccCCeEEEEEeeeEEEEEEcceEEEeeeEEEE
Confidence 44566665553322 2345567777666551 22 2222 478999999887632 1357899999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCE
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDM 549 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~ 549 (609)
|||++.|.++++--|++.+.+++...|+-+
T Consensus 249 CVHKKLRsKRLAPVLIKEITRRvnl~gI~Q 278 (496)
T 1rxt_A 249 CVHKKLRSKRVAPVLIREITRRVHLEGIFQ 278 (496)
T ss_dssp EECSSCCCSSSHHHHHHHHHHHHTTTTCCC
T ss_pred EecHhhhhccCcHHHHHHHHHHhhhcceee
Confidence 999999999999999999999998888754
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=80.58 E-value=12 Score=38.52 Aligned_cols=114 Identities=4% Similarity=-0.088 Sum_probs=70.2
Q ss_pred cccccCC-cCCHHHHHHHHhhhHhhccC-ccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecCCC--eEEEE
Q 007275 449 EGTRTAK-VTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEK--CGEVA 517 (609)
Q Consensus 449 ~~IR~a~-~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~~~--~~eI~ 517 (609)
..+|+++ .+| +.+..++......... ..++.+.+..++ ..+++.+.+|+++||+.+....+++ ...|.
T Consensus 154 ~~v~~~~~~~d-~~~~~~~~~~~~~~~g~~~r~~~~w~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~~~~~~~~~~~~~I~ 232 (396)
T 2ozg_A 154 LPLEPVVLKNN-PIFHELYQQQAQLTHGYLDRHPAIWQGLNRTLDTETLYSYLIGDKDKPQGYIIFTQERTRDGSILRIR 232 (396)
T ss_dssp SCEEECCCTTC-HHHHHHHHHHHHHSTTCEECCHHHHHHHTCCCTTCCCEEEEEEETTEEEEEEEEEEEECSSCEEEEEE
T ss_pred ceEEECCccch-HHHHHHHHHHHhhCCCCccCCHHHHHHHhcccCCCceEEEEECCCCCccEEEEEEEcCCCCcceEEEE
Confidence 3688888 888 8888887765444332 345544444333 4456667899999999887543311 45565
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH---HHHHHHHHCCCeEe
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT---RTADWFKSRGFREC 569 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~---~a~~fYek~GF~~~ 569 (609)
.++.. .......|+.++.... .....+.+.+. +...|.+..|++..
T Consensus 233 ~l~a~----~~~a~~~L~~~l~~~~--~~~~~v~~~~p~~~~l~~~l~~~~~~~~ 281 (396)
T 2ozg_A 233 DWVTL----SNPAVQSFWTFIANHR--SQIDKVTWKSSVIDALTLLLPEQSATIR 281 (396)
T ss_dssp EEEEC----SHHHHHHHHHHHHTTT--TTCSEEEEEECTTCSGGGGSSSCCCEEE
T ss_pred EeeeC----CHHHHHHHHHHHHhHh--hhheEEEEEcCCCCchhhhCCCCcceeE
Confidence 55432 3467777887776532 14567777662 34556667777644
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 609 | ||||
| d2bufa1 | 300 | c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Ps | 8e-35 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 2e-34 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 2e-10 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 1e-26 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 2e-10 | |
| d1e19a_ | 313 | c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcu | 1e-14 | |
| d1qsra_ | 162 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 2e-11 | |
| d2gana1 | 182 | d.108.1.1 (A:1-182) Hypothetical protein PH0736 {P | 2e-11 | |
| d1i12a_ | 157 | d.108.1.1 (A:) Glucosamine-phosphate N-acetyltrans | 5e-11 | |
| d1ygha_ | 164 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 1e-10 | |
| d1n71a_ | 180 | d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransfera | 1e-10 | |
| d1r57a_ | 102 | d.108.1.1 (A:) Hypothetical protein SA2309 {Staphy | 6e-10 | |
| d1b7ba_ | 307 | c.73.1.1 (A:) Carbamate kinase {Enterococcus faeci | 6e-10 | |
| d1yx0a1 | 151 | d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bac | 1e-09 | |
| d1z4ra1 | 162 | d.108.1.1 (A:497-658) Catalytic domain of GCN5 his | 2e-09 | |
| d2hv2a2 | 285 | d.108.1.10 (A:2-286) Hypothetical protein EF1021 { | 5e-09 | |
| d1y9ka1 | 152 | d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillu | 3e-08 | |
| d1sqha_ | 297 | d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fr | 4e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 5e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 2e-07 | |
| d2i00a2 | 291 | d.108.1.10 (A:10-300) Putative acetyltransferase E | 8e-08 | |
| d1vkca_ | 149 | d.108.1.1 (A:) Putative acetyltransferase PF0028 { | 1e-07 | |
| d1y9wa1 | 140 | d.108.1.1 (A:1-140) Probable acetyltransferase BC2 | 1e-07 | |
| d2aj6a1 | 118 | d.108.1.1 (A:1-118) Hypothetical protein MW0638 {S | 3e-07 | |
| d1m4ia_ | 181 | d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransfera | 6e-07 | |
| d2fiaa1 | 157 | d.108.1.1 (A:1-157) Probable acetyltransferase EF1 | 1e-06 | |
| d1z4ea1 | 150 | d.108.1.1 (A:4-153) Transcriptional regulator BH19 | 1e-06 | |
| d2i6ca1 | 160 | d.108.1.1 (A:1001-1160) Putative acetyltransferase | 2e-06 | |
| d2g3aa1 | 137 | d.108.1.1 (A:1-137) Probable acetyltransferase Atu | 3e-06 | |
| d1u6ma_ | 189 | d.108.1.1 (A:) Putative acetyltransferase EF0945 { | 8e-05 | |
| d1p0ha_ | 308 | d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacter | 1e-04 | |
| d1ghea_ | 170 | d.108.1.1 (A:) Tabtoxin resistance protein {Pseudo | 2e-04 | |
| d1tiqa_ | 173 | d.108.1.1 (A:) Protease synthase and sporulation n | 2e-04 | |
| d1cjwa_ | 166 | d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep | 6e-04 | |
| d1s3za_ | 147 | d.108.1.1 (A:) Aminoglycoside N-acetyltransferase | 8e-04 | |
| d1ufha_ | 155 | d.108.1.1 (A:) Putative acetyltransferase YycN {Ba | 9e-04 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 131 bits (330), Expect = 8e-35
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 25/257 (9%)
Query: 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIR 132
T + + Q K EA PY+ G T V+ G + S L +D+ + +GI
Sbjct: 1 TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGIN 60
Query: 133 FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPP 191
V+V G QI LL E+ ++ R+TD+ ++ GG + I ++
Sbjct: 61 PVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLIN---- 116
Query: 192 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVT 242
RHG S+ +G++ + AK+ V + +D G GEV V+V
Sbjct: 117 -----RHGGSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVG 167
Query: 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESG 301
+ + G + +++ +G S+GE N N VA A A++A+KL+ + + ++D+ G
Sbjct: 168 LLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQG 227
Query: 302 HLIRFLTLQEADSLIRQ 318
++ L+ ++ + LI
Sbjct: 228 QVLTGLSTEQVNELIAD 244
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 130 bits (327), Expect = 2e-34
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 15/238 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSP-YLDPILKDIAFLHHLGIRFVLVPGTH 140
V EA PY+ G TFV+ G + ++DI L + GI+ ++V G
Sbjct: 4 DTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGG 63
Query: 141 VQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGD 200
I +++ + G E + +R+TD +++ G N +
Sbjct: 64 PAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGK--------------INKEIVMN 109
Query: 201 SSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG 260
+ V + + + D G G+VKKV+ + ++ + +++ +G
Sbjct: 110 LNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVG 169
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
G N N A A ++ A+KLI + D + + G LI LT EA+ LIR
Sbjct: 170 IGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 60.2 bits (145), Expect = 2e-10
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 233 GMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 107 bits (268), Expect = 1e-26
Identities = 57/251 (22%), Positives = 89/251 (35%), Gaps = 13/251 (5%)
Query: 73 ETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGI 131
E + EA P+L G VV G ++ L D+AFL + GI
Sbjct: 2 EALPT---HIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGI 58
Query: 132 RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP 191
V+V G QI +L G E + G +R+T E L A G L
Sbjct: 59 HPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHG 118
Query: 192 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251
+ G+ ++ + D G G+V +V+ M + + G
Sbjct: 119 PYAVGITGEDAQLF---------TAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAG 169
Query: 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQE 311
+ ++S L + G V N N A A A A+ A+KL+ + D L L +
Sbjct: 170 RIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEI 229
Query: 312 ADSLIRQRVKQ 322
+ Q +
Sbjct: 230 DTGTLAQLLPT 240
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A GV H++DG + +L+ELF G GT V
Sbjct: 244 GMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKV 288
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 73.0 bits (178), Expect = 1e-14
Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 34/235 (14%)
Query: 116 LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175
+ + IA + G V+ G Q+ LL G + A +
Sbjct: 29 VRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWI 88
Query: 176 GG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA------------KRK 222
G I+ ++ +L + + + + + + K
Sbjct: 89 GYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREK 148
Query: 223 GVVDGVDYG--------ATGEVKKVDVTRMR--------ERLDGGCLVILSNLGYSSSGE 266
G + D G + V+ ++ GG V + G
Sbjct: 149 GWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGV 208
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGPIL-----DESGHLIRFLTLQEADSLI 316
+ A + AD + + D E +R + ++E
Sbjct: 209 EAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYY 263
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Score = 60.5 bits (146), Expect = 2e-11
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
S +++ + ++I + ++ EVA + V+ + +G G +L++ + ++
Sbjct: 48 SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIE 107
Query: 549 MLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598
L A +FK +GF + M E+ + I + P
Sbjct: 108 YLLTYADNFAIGYFKKQGFTK-EHRMPQEKWKGYIKDYDGGTLMECYIHPY 157
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 61.0 bits (147), Expect = 2e-11
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 430 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 488
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 489 SFYVVEREGQIIACAALFP--------------FFKEKCGEVAAIGVSPECRGQGQGDKL 534
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 535 LDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570
L++ K+ SLG D +++T + ++ +GFRE
Sbjct: 128 LEFAVKRLRSLGKD-PYVVTFPNLEAYSYYYMKKGFREIM 166
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.2 bits (142), Expect = 5e-11
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 24/146 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------------------FYVV 493
R + DL + + ++ L G + + +L+K + V
Sbjct: 8 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 67
Query: 494 EREGQIIACAALFPFFKE-----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
+R + A + K CG + I V+ + +GQG G L+D + G
Sbjct: 68 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCY 127
Query: 549 MLFLLTTRTA-DWFKSRGFRECSIEM 573
+ L +++ GF +EM
Sbjct: 128 KIILDCDEKNVKFYEKCGFSNAGVEM 153
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.6 bits (141), Expect = 1e-10
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
S V+ + ++ PF K + E+ +S + +G G L+++++ +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNI 108
Query: 549 MLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 598
FL +FK +GF + I + I +LP
Sbjct: 109 KYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGYIKDYEGGTLMQCSMLPR 159
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} Length = 180 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Score = 58.8 bits (141), Expect = 1e-10
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 442 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 501
M+ S+ ++ LS + ++ P + EE++ + +++
Sbjct: 1 MIISE-FDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEV-EEMMNPERIAVAAVDQDELVG 58
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
P + E+ + V R G +L++Y+EK+ AS G ++L T
Sbjct: 59 FIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGT 111
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Length = 102 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Score = 54.6 bits (131), Expect = 6e-10
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 538
++ E+ + + FY+ + E +A + F + GVS E GQG G KLL +
Sbjct: 2 SNLEIKQGENKFYIGDDENNALAEIT-YRFVDNNEINIDHTGVSDELGGQGVGKKLLKAV 60
Query: 539 EKKAASLGLDMLFLLTTRTADWFK 562
+ A L ++ + +
Sbjct: 61 VEHARENNLKIIASCSF-AKHMLE 83
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Score = 58.4 bits (140), Expect = 6e-10
Identities = 27/259 (10%), Positives = 64/259 (24%), Gaps = 39/259 (15%)
Query: 99 GGTFVVIISGEIVSSP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE 149
G VV + G + S L + L G R ++ G Q+ LL +
Sbjct: 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQ 60
Query: 150 RGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP-----------ICNIRRH 198
+ D+ + + +L+ + +
Sbjct: 61 QQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADE 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERLDG 250
+ +G + A + G + + + + +
Sbjct: 121 AFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKN 180
Query: 251 GCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-----DE 299
+ I G G + + A ++AD L+ + +
Sbjct: 181 DIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKP 240
Query: 300 SGHLIRFLTLQEADSLIRQ 318
+ +T+ E + +
Sbjct: 241 DEKQLTNVTVAELEEYKQA 259
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Score = 54.8 bits (131), Expect = 1e-09
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 455 KVTDLSGIKQIIQPLVESGALVRR-TDEELLKALD---------SFYVVEREGQIIACAA 504
K+ DL+G +Q++ + E + + E + AL +F+ ++ C A
Sbjct: 4 KIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGA 62
Query: 505 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----- 559
L GE+ ++ S +G ++L +I ++A G + L L T A
Sbjct: 63 LKELDTR-HGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPAR 121
Query: 560 -WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
++S GF+ C E NS + KKL
Sbjct: 122 KLYESFGFQYC-------EPFADYGEDPNSVFMTKKL 151
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 2e-09
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549
+ ++G++I F + E+ V+ + +G G L++++++ +
Sbjct: 54 TLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILY 113
Query: 550 LFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLP 597
A +FK +GF + +P+ R M +L P
Sbjct: 114 FLTYADEYAIGYFKKQGFSK--DIKVPKSRYLGYIKDYEGATLMECELNP 161
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Score = 55.2 bits (132), Expect = 5e-09
Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 8/129 (6%)
Query: 452 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF- 509
+ ++ + ++ + R+ E L + Y + Q+ + PF
Sbjct: 6 KKMGKEEMKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQV 65
Query: 510 -----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 564
+ + + PE RG+G ++ + A + L L + +++
Sbjct: 66 NFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVA-LSYLAPFSYPFYRQY 124
Query: 565 GFRECSIEM 573
G+ + +
Sbjct: 125 GYEQTFEQA 133
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Score = 50.8 bits (121), Expect = 3e-08
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 549
YV ++ G +I L + K E+ I V+ +G+G G KLL + + A G+
Sbjct: 37 TYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSK 95
Query: 550 LFLLT----TRTADWFKSRGFRECSIE 572
L + T ++ GFR SI+
Sbjct: 96 LEVGTGNSSVSQLALYQKCGFRIFSID 122
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 53.1 bits (127), Expect = 4e-08
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 27/193 (13%)
Query: 396 RLNGYLSELAAA--AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEG--T 451
L RGV + + L D DL
Sbjct: 117 LLTNVDLGFCNRVKELAVSRGVTAIQPRQ-----CFGMVLSHEDAF-CAKVPDLPSEFEI 170
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 510
R + D + + G + L++ S + + G++IA F
Sbjct: 171 RRLRAEDAAMVHDSWPN---KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQNDF-- 225
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 566
+ + V P+ +G G L + ++ A L R+ K G+
Sbjct: 226 ---SGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGY 282
Query: 567 RECS----IEMIP 575
++ I+++P
Sbjct: 283 QKDLVNEWIKLVP 295
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (123), Expect = 5e-08
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445
G + ++ AA R + V + L LF MGT + +
Sbjct: 213 GMIVKVNAALDAARTLGRPVDIASWRHAE-QLPALFNGMPMGTRILA 258
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 50.2 bits (118), Expect = 2e-07
Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 18/220 (8%)
Query: 103 VVIISGEIVSSP-YLDPILKDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRY 160
++ + G ++ S L+ + + R V+V G +D+L+ K
Sbjct: 6 IIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGL 65
Query: 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
R+T ++ + A G + I + +V
Sbjct: 66 RVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKV------------- 112
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+ G G + + L+ G L ++S++G + G+++N N + ATA A
Sbjct: 113 ---TQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALA 169
Query: 281 LAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRV 320
+ AD ++ ILD G I +T +A+ LI Q +
Sbjct: 170 ATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI 209
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Score = 51.9 bits (123), Expect = 8e-08
Identities = 23/169 (13%), Positives = 59/169 (34%), Gaps = 18/169 (10%)
Query: 452 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKAL---DSFYVVEREGQII 500
+ + + +++ + ESG +R + + + + E Q+I
Sbjct: 4 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 63
Query: 501 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 554
+ A++P K G V +G PE G L+ ++ + L
Sbjct: 64 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQW-ISYLF 122
Query: 555 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGII 603
+++ +G+ S ++ + R ++ + +++L D +
Sbjct: 123 PYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVF 171
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Score = 49.4 bits (117), Expect = 1e-07
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
Query: 490 FYVVEREGQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL 545
F + +++ + K + I V RG G G LL E+ A
Sbjct: 55 FVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKER 114
Query: 546 GLDMLFLLTTRT---ADWFKSRGFRECSIEMIPEERRKRI 582
G + L W++ RG++ ++ M K I
Sbjct: 115 GAKKIVLRVEIDNPAVKWYEERGYKARALIM-----EKPI 149
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Score = 49.1 bits (116), Expect = 1e-07
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
S V EG+I +F + + V R G G +LL IE A G
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYHLH--IDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 549 MLFLLTTRT-ADWFKSR-GFRECSIEMIPEERRKRINLSRNSKYYMKKL 595
++ L + A F + G+RE + + ++ K+L
Sbjct: 99 LILLDSFSFQAPEFYKKHGYREYG-------VVEDHPKGHSQHFFEKRL 140
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Length = 118 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Score = 47.6 bits (112), Expect = 3e-07
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 15/114 (13%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEE------------LLKALDSFYVVERE 496
RT + + IKQI L+ + + L D Y+ E E
Sbjct: 2 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 61
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550
GQ+IA ++ + + V P+ R G +L +EK A ++ +
Sbjct: 62 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI 115
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 47.9 bits (113), Expect = 6e-07
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYV-VEREGQIIACAALFPF- 508
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 509 -----FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 563
+CG V + V + RGQ LLD +E+ + R + S
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYAS 128
Query: 564 RGFR 567
RG+
Sbjct: 129 RGWL 132
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 20/159 (12%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL--------VRRTDEELLKALD--SFYVVEREGQIIA 501
R A +L I Q + + + + ++ + + Y++ E I +
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFS 63
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW- 560
A ++ + SP +G G L +EK+A G ++ T T
Sbjct: 64 MATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRM 123
Query: 561 ---FKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596
F+S+GF + E + L S Y K L
Sbjct: 124 IRFFESKGFTKI------HESLQMNRLDFGSFYLYVKEL 156
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} Length = 150 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Score = 46.5 bits (109), Expect = 1e-06
Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 20/142 (14%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA------LVRRTDEELLKALDS-----FYVVEREGQII 500
R A DL + ++ V + + K + V +I+
Sbjct: 5 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 64
Query: 501 ACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 554
+ + + RGQG G +L+ + ++A G ++ L T
Sbjct: 65 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 124
Query: 555 ---TRTADWFKSRGFRECSIEM 573
+++ GF+ +
Sbjct: 125 KQRPDALRFYEQLGFKASHEGL 146
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.9 bits (107), Expect = 2e-06
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 18/158 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI-----EKKAASLGLDMLFLLTTRTA 558
+ + + + V+P RG G L+ + E+ A L F
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 559 DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596
+ G++ +I + +R+ L M K L
Sbjct: 126 LLYTQLGYQPRAIAERHDPDGRRVAL-----IQMDKPL 158
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 44.9 bits (105), Expect = 3e-06
Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 14/146 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
+ V D K I PLV R E + L + + + +
Sbjct: 4 VLSDVADAEAEKAIRDPLVAYNL--ARFGESDKRDL-NITIRNDDNSVTGGLVGHTARGW 60
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSR-GFREC 569
V + V RGQG KLL E++A G ++ T R GF +
Sbjct: 61 LY--VQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKI 118
Query: 570 SIEMIPEERRKRINLSRNSKYYMKKL 595
++ ++ + K+
Sbjct: 119 -------GSLGPLSSGQSITWLEKRF 137
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Score = 41.6 bits (96), Expect = 8e-05
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 60/195 (30%)
Query: 452 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDSFY-------------VVER 495
R+A D I +++ + +E L ++E+++ L V E
Sbjct: 4 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH 63
Query: 496 EGQIIACAALFPFFKEK------------------------------CGEVAAIGVSPEC 525
G++ A +P EK + I V
Sbjct: 64 AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERF 123
Query: 526 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 581
RG G G KLLD + + A + G L L + S+GF++ + I
Sbjct: 124 RGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLY-- 181
Query: 582 INLSRNSKYYMKKLL 596
+M+K +
Sbjct: 182 --------NHMQKEV 188
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 9/129 (6%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS-------FYVVEREGQIIACAA 504
+ ++ ++ + V E++L+ L G II
Sbjct: 6 SALTADEQRSVRALVT-ATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLN 64
Query: 505 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 564
L P + G +A + V P+ R +G G + K A +
Sbjct: 65 LSPP-RGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASAL 123
Query: 565 GFRECSIEM 573
G +
Sbjct: 124 GLVGVRELI 132
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Score = 40.3 bits (93), Expect = 2e-04
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKC---GEVAAIGVSPECRG 527
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 42 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 101
Query: 528 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW---FKSRGFRECSIEMIPEERRKRINL 584
+G G +L+D +E+ A +L L T + + + + +P
Sbjct: 102 RGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGE--LPGYCATPDGR 159
Query: 585 SRNSKYYMKKL 595
+ Y K L
Sbjct: 160 LHPTAIYFKTL 170
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} Length = 173 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 2e-04
Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 33/172 (19%)
Query: 452 RTAKVTDLSGIKQI-----------------IQPLVESGALVRRTDEELLKALDSFYVVE 494
+ DL ++Q+ ++ +ES + ++EL F+ +
Sbjct: 5 KKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIY 64
Query: 495 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 548
+ +I + + E+ I + + G G LL+ + A
Sbjct: 65 FDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKK 124
Query: 549 MLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596
++L ++K GF + + + M K L
Sbjct: 125 NIWLGVWEKNENAIAFYKKMGFVQTG------AHSFYMGDEEQTDLIMAKTL 170
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 38.8 bits (89), Expect = 6e-04
Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 21/139 (15%)
Query: 452 RTAKVTDLSGIKQIIQ-----PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 506
R D +G+ +I + + L + EG+++A
Sbjct: 9 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 68
Query: 507 PFFKEKC--------------GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552
+ +E+ + A+ V R QG+G LL + +
Sbjct: 69 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 128
Query: 553 LTTRTA--DWFKSRGFREC 569
L A +++ GF
Sbjct: 129 LMCEDALVPFYQRFGFHPA 147
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} Length = 147 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Score = 37.9 bits (87), Expect = 8e-04
Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 16/143 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 508
R T L + + + L A + +E L + ++ +G I A
Sbjct: 6 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 65
Query: 509 FK-------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 557
+ I V P R +G +L+ +++ + G + T T +
Sbjct: 66 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTIS 125
Query: 558 ADWFKSRGFRECSIEMIPEERRK 580
++ GF E E + R++
Sbjct: 126 QKVHQALGFEE--TERVIFYRKR 146
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} Length = 155 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Score = 38.1 bits (87), Expect = 9e-04
Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 490 FYVVEREGQIIACAALFPFFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547
+ + E I+ + + ++ + G+ RG+G + L +++ A S+G+
Sbjct: 62 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 121
Query: 548 DMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRI 582
L L ++ GF+E + M K++
Sbjct: 122 RKLSLHVFAHNQTARKLYEQTGFQETDVVM-----SKKL 155
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 609 | |||
| d2bufa1 | 300 | N-acetyl-l-glutamate kinase {Pseudomonas aeruginos | 100.0 | |
| d2btya1 | 282 | N-acetyl-l-glutamate kinase {Thermotoga maritima [ | 100.0 | |
| d2ap9a1 | 291 | N-acetyl-l-glutamate kinase {Mycobacterium tubercu | 100.0 | |
| d1e19a_ | 313 | Carbamate kinase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1b7ba_ | 307 | Carbamate kinase {Enterococcus faecium [TaxId: 135 | 100.0 | |
| d1gs5a_ | 258 | N-acetyl-l-glutamate kinase {Escherichia coli [Tax | 100.0 | |
| d2akoa1 | 250 | Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 | 99.94 | |
| d2brxa1 | 225 | Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: | 99.93 | |
| d2ij9a1 | 219 | Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax | 99.9 | |
| d1ybda1 | 236 | Uridylate kinase PyrH {Neisseria meningitidis [Tax | 99.86 | |
| d2a1fa1 | 236 | Uridylate kinase PyrH {Haemophilus influenzae [Tax | 99.85 | |
| d1z9da1 | 238 | Uridylate kinase PyrH {Streptococcus pyogenes [Tax | 99.78 | |
| d2fiwa1 | 156 | Probable N-acetyltransferase RPA1999 {Rhodopseudom | 99.72 | |
| d1yr0a1 | 163 | Phosphinothricin acetyltransferase {Agrobacterium | 99.69 | |
| d1tiqa_ | 173 | Protease synthase and sporulation negative regulat | 99.68 | |
| d2i6ca1 | 160 | Putative acetyltransferase PA4794 {Pseudomonas aer | 99.67 | |
| d2fiaa1 | 157 | Probable acetyltransferase EF1919 {Enterococcus fa | 99.66 | |
| d1yvoa1 | 169 | Hypothetical protein PA4866 {Pseudomonas aeruginos | 99.64 | |
| d2fe7a1 | 156 | Probable N-acetyltransferase PA0478 {Pseudomonas a | 99.64 | |
| d1n71a_ | 180 | Aminoglycoside 6'-N-acetyltransferase {Enterococcu | 99.63 | |
| d1qsra_ | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.63 | |
| d1mk4a_ | 157 | Hypothetical protein YqiY {Bacillus subtilis [TaxI | 99.62 | |
| d1vhsa_ | 165 | Putative phosphinothricin acetyltransferase YwnH { | 99.62 | |
| d1y9wa1 | 140 | Probable acetyltransferase BC2806 {Bacillus cereus | 99.62 | |
| d1s3za_ | 147 | Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal | 99.61 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 99.61 | |
| d1yx0a1 | 151 | Hypothetical protein YsnE {Bacillus subtilis [TaxI | 99.6 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 99.6 | |
| d1u6ma_ | 189 | Putative acetyltransferase EF0945 {Enterococcus fa | 99.58 | |
| d1i12a_ | 157 | Glucosamine-phosphate N-acetyltransferase GNA1 {Ba | 99.58 | |
| d1ygha_ | 164 | Catalytic domain of GCN5 histone acetyltransferase | 99.58 | |
| d2ae6a1 | 161 | Putative acetyltransferase EF0244 {Enterococcus fa | 99.58 | |
| d2cy2a1 | 174 | Probable acetyltransferase TTHA1209 {Thermus therm | 99.57 | |
| d2atra1 | 137 | Probable acetyltransferase SP0256 {Streptococcus p | 99.57 | |
| d2fl4a1 | 146 | Probable spermine/spermidine acetyltransferase EF1 | 99.57 | |
| d2ge3a1 | 164 | Probable acetyltransferase Atu2290 {Agrobacterium | 99.55 | |
| d1cjwa_ | 166 | Serotonin N-acetyltranferase {Sheep (Ovis aries) [ | 99.55 | |
| d1y9ka1 | 152 | IAA acetyltransferase {Bacillus cereus [TaxId: 139 | 99.52 | |
| d2g3aa1 | 137 | Probable acetyltransferase Atu2258 {Agrobacterium | 99.51 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 99.51 | |
| d1z4ra1 | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.5 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 99.5 | |
| d1ufha_ | 155 | Putative acetyltransferase YycN {Bacillus subtilis | 99.5 | |
| d2b5ga1 | 167 | Diamine acetyltransferase 1 {Human (Homo sapiens) | 99.49 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 99.49 | |
| d1q2ya_ | 140 | Probable acetyltransferase YjcF {Bacillus subtilis | 99.48 | |
| d2euia1 | 153 | Probable acetyltransferase PA4026 {Pseudomonas aer | 99.48 | |
| d1yvka1 | 152 | Hypothetical protein YvbK (BSu33890) {Bacillus sub | 99.46 | |
| d2beia1 | 167 | Diamine acetyltransferase 2 {Human (Homo sapiens) | 99.46 | |
| d1wwza1 | 157 | Hypothetical protein PH1933 {Pyrococcus horikoshii | 99.45 | |
| d2hmfa1 | 302 | Aspartokinase {Methanococcus jannaschii [TaxId: 21 | 99.44 | |
| d1vkca_ | 149 | Putative acetyltransferase PF0028 {Pyrococcus furi | 99.43 | |
| d2gana1 | 182 | Hypothetical protein PH0736 {Pyrococcus horikoshii | 99.39 | |
| d1xeba_ | 149 | Hypothetical protein PA0115 {Pseudomonas aeruginos | 99.37 | |
| d1bo4a_ | 137 | Aminoglycoside 3-N-acetyltransferase {Serratia mar | 99.35 | |
| d2cdqa1 | 304 | Aspartokinase {Thale cress (Arabidopsis thaliana) | 99.35 | |
| d2aj6a1 | 118 | Hypothetical protein MW0638 {Staphylococcus aureus | 99.33 | |
| d2j0wa1 | 292 | Aspartokinase {Escherichia coli [TaxId: 562]} | 99.26 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 99.25 | |
| d1yk3a1 | 198 | Hypothetical protein Rv1347c/MT1389 {Mycobacterium | 99.23 | |
| d1s7ka1 | 174 | L7/L12-Ribosomal-protein-serine acetyltransferase | 99.2 | |
| d2hv2a2 | 285 | Hypothetical protein EF1021 {Enterococcus faecalis | 99.19 | |
| d2i00a2 | 291 | Putative acetyltransferase EF2353 {Enterococcus fa | 99.17 | |
| d1nsla_ | 180 | Probable acetyltransferase YdaF {Bacillus subtilis | 99.15 | |
| d1m4ia_ | 181 | Aminoglycoside 2'-N-acetyltransferase {Mycobacteri | 99.14 | |
| d1yrea1 | 183 | Hypothetical protein PA3270 {Pseudomonas aeruginos | 99.1 | |
| d2fcka1 | 178 | Putative ribosomal-protein-serine acetyltransferas | 99.08 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 99.07 | |
| d2fsra1 | 164 | Probable acetyltranferase Atu2435 {Agrobacterium t | 99.03 | |
| d1sqha_ | 297 | Hypothetical protein cg14615-pa {Fruit fly (Drosop | 98.99 | |
| d1r57a_ | 102 | Hypothetical protein SA2309 {Staphylococcus aureus | 98.97 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.43 | |
| d1ro5a_ | 197 | Autoinducer synthesis protein LasI {Pseudomonas ae | 98.06 | |
| d1kzfa_ | 210 | Acyl-homoserinelactone synthase EsaI {Pantoea stew | 97.58 | |
| d1xmta_ | 95 | Hypothetical protein AT1g77540 {Thale cress (Arabi | 97.31 | |
| d1ylea1 | 338 | Arginine N-succinyltransferase, alpha chain, AstA | 97.12 | |
| d1lrza3 | 182 | Methicillin resistance protein FemA {Staphylococcu | 95.78 | |
| d1rxta1 | 141 | N-myristoyl transferase, NMT {Human (Homo sapiens) | 94.81 | |
| d1iyka1 | 165 | N-myristoyl transferase, NMT {Yeast (Candida albic | 94.39 | |
| d1iica1 | 185 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 93.74 | |
| d1boba_ | 315 | Histone acetyltransferase HAT1 {Baker's yeast (Sac | 93.02 | |
| d2giva1 | 271 | Probable histone acetyltransferase MYST1 {Human (H | 92.44 | |
| d1ne9a2 | 171 | Peptidyltransferase FemX {Weissella viridescens [T | 90.75 | |
| d2ozua1 | 270 | Histone acetyltransferase MYST3 {Human (Homo sapie | 90.61 | |
| d1iica2 | 237 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 90.61 | |
| d1fy7a_ | 273 | Histone acetyltransferase ESA1 {Baker's yeast (Sac | 89.98 | |
| d1iyka2 | 227 | N-myristoyl transferase, NMT {Yeast (Candida albic | 89.82 | |
| d2d4pa1 | 130 | Hypothetical protein TTHA1254 {Thermus thermophilu | 87.13 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.1e-55 Score=457.22 Aligned_cols=282 Identities=28% Similarity=0.469 Sum_probs=262.0
Q ss_pred chhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccccc
Q 007275 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL 157 (609)
Q Consensus 79 ~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~ 157 (609)
...+|+++||+|+|||++||||+|||||||+++++++ +.++++||+.|+..|.++|||||||||++..+++++++++++
T Consensus 6 ~~~~~~~~l~~a~PYi~~~r~ktiVIKlGG~~l~~~~~~~~~~~dIa~L~~~G~~vViVhGgg~~i~~~l~~~gi~~~~~ 85 (300)
T d2bufa1 6 DAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFI 85 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEEChHHhCChhHHHHHHHHHHHHHHcCCcEEEecChHHHHHHHHHhcccCceec
Confidence 4678999999999999999999999999999999876 578999999999999999999999999999999999999999
Q ss_pred CCccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcc---------cC
Q 007275 158 GRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DG 227 (609)
Q Consensus 158 ~g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~---------~~ 227 (609)
+|.|+|+++.|+.+ +++.+++|..+++. |.++|++ ++++++.|++++.+++..+. ++
T Consensus 86 ~g~RvT~~~~l~~~~~~~~g~vn~~lv~~---------l~~~g~~----a~~l~~~d~~~i~~~~~~~~~~~~~~~~~~~ 152 (300)
T d2bufa1 86 DGMRVTDAATMDVVEMVLGGQVNKDIVNL---------INRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEI 152 (300)
T ss_dssp SSSBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTCC----EEEEEETGGGCEEEEECCCCCC--------C
T ss_pred CCcccccchhHHHHHHHHHhHHHHHHHHH---------HHhcCCc----ccccCCCccceEEeecccccccCcccccccc
Confidence 99999999999998 77789999999987 4788887 89999999999998886543 46
Q ss_pred cCCcceeeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEeccccc-CCCCccccc
Q 007275 228 VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRF 306 (609)
Q Consensus 228 ~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv-~~~~~lI~~ 306 (609)
+|++|+|+|+.+|.+.|+.||+.|+|||++|++++.+|+.+|+|+|.+|+++|.+|+||+||||||+||+ +.+++++++
T Consensus 153 id~g~~G~v~~v~~~~i~~ll~~g~Ipvis~~~~~~~G~~~nin~D~~Aa~lA~~L~AdkLI~Ltdv~Gv~~~~g~~~~~ 232 (300)
T d2bufa1 153 IDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTG 232 (300)
T ss_dssp CCCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCE
T ss_pred cccCcccceeecchhHHHHHhcCCCeEEecccccCcccchhcccHHHHHHHHHHHcCCCeEEEEcCCCccccCCCcchhh
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998 577999999
Q ss_pred cCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccc
Q 007275 307 LTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGF 386 (609)
Q Consensus 307 it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~ 386 (609)
++.+++++++..+. + +| |
T Consensus 233 l~~~~~~~li~~~~-----------------------------i------------------------~g-G-------- 250 (300)
T d2bufa1 233 LSTEQVNELIADGT-----------------------------I------------------------YG-G-------- 250 (300)
T ss_dssp ECHHHHHHHHHTTC-----------------------------S------------------------CT-T--------
T ss_pred ccHHHHHHHHHcCC-----------------------------c------------------------Cc-h--------
Confidence 99999999986532 1 12 4
Q ss_pred cccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccccc
Q 007275 387 AIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448 (609)
Q Consensus 387 ~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d~~ 448 (609)
|.+||++|..||++||+||||+||+.+++||.||||++|+||+|+++.|
T Consensus 251 -------------M~~Kl~aa~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~GT~I~~~~~ 299 (300)
T d2bufa1 251 -------------MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKR 299 (300)
T ss_dssp -------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECCCC
T ss_pred -------------HHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHcCCCCceeEEecCCC
Confidence 9999999999999999999999999999999999999999999998876
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.8e-51 Score=420.63 Aligned_cols=276 Identities=29% Similarity=0.462 Sum_probs=253.7
Q ss_pred hHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCC
Q 007275 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (609)
Q Consensus 81 ~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g 159 (609)
.+||+.||||+|||++||+|+||||+||+++++++ +++++++|+.|++.|+++|||||||++++..+.++++++.+..+
T Consensus 3 ~~~~~~~~~~~pyi~~~r~k~iVIKlGgsvi~~~~~~~~l~~dIa~L~~~G~~iVlVhGg~~~~~~~l~~~~i~~~~~~~ 82 (282)
T d2btya1 3 IDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNG 82 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSS
T ss_pred chHHHHHHHHHHHHHHhCCCEEEEEECchHhCChhHHHHHHHHHHHHHHCCCeEEEEECCCccchhhHHHcCCcceeccC
Confidence 47999999999999999999999999999999876 78999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEee
Q 007275 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (609)
Q Consensus 160 ~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~ 238 (609)
.|+|+.+.++.+ +++++.+|..++.. |.++|++ +++++..+.....+.. ..+..|++++|+++.
T Consensus 83 ~~~t~~~~~~~~~~~~~~~~n~~~~~~---------l~~~g~~----a~~l~~~~~~~~~~~~--~~~~~d~~~~g~~~~ 147 (282)
T d2btya1 83 HRVTDEKTMEIVEMVLVGKINKEIVMN---------LNLHGGR----AVGICGKDSKLIVAEK--ETKHGDIGYVGKVKK 147 (282)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHTTTCC----EEEEETTGGGSEEEEE--CCTTCCCBSBEEEEE
T ss_pred ccccchhhHHHHHHHHhchhhHHHHHH---------HHhcCCC----eeeeeccccceeEecc--ccccccccccccccc
Confidence 999999999998 77889999999886 4778887 8899888777666554 356689999999999
Q ss_pred eCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCCCCccccccCHHHHHHHHHh
Q 007275 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318 (609)
Q Consensus 239 v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~~~~lI~~it~~e~~~l~~~ 318 (609)
+|.+.|+.+|+.|.|||++|++++++|+++|+|+|.+|+.+|.+++||+|||+||++|+++++++|++++..|++.++..
T Consensus 148 v~~~~i~~lL~~~~ipvi~~~~~~~~g~~~nl~~d~~aa~iA~~l~AdkLI~ltdv~Gl~~d~~~i~~~~~~~~~~~~~~ 227 (282)
T d2btya1 148 VNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTT
T ss_pred cChHHHHHHHhCCCceeecCcccCCcceeeeccccchhHHHhhhcCCceeEEeccccceecCccccccCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999998888644
Q ss_pred hchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhccc
Q 007275 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (609)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~ 398 (609)
+. + +| |
T Consensus 228 ~~-----------------------------~------------------------tg-G-------------------- 233 (282)
T d2btya1 228 GT-----------------------------V------------------------TG-G-------------------- 233 (282)
T ss_dssp TC-----------------------------S------------------------CT-T--------------------
T ss_pred CC-----------------------------c------------------------Cc-h--------------------
Confidence 21 1 23 5
Q ss_pred CCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccccc
Q 007275 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (609)
Q Consensus 399 ~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~d 446 (609)
|.+||++|..||++||+||||+||+.+++|+.|||+++|+||+|+.+
T Consensus 234 -M~~Kl~aA~~A~~~GV~~v~I~~g~~~~~ll~elft~~g~GT~I~~~ 280 (282)
T d2btya1 234 -MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp -HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred -HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhCCCCceEEEEeC
Confidence 99999999999999999999999999999999999999999999865
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=9.7e-50 Score=410.93 Aligned_cols=277 Identities=27% Similarity=0.385 Sum_probs=249.5
Q ss_pred chhHHHHHHHHhhhhHHhhcCCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCccccc
Q 007275 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL 157 (609)
Q Consensus 79 ~~~~~~~~~r~a~pyi~~~~~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~ 157 (609)
+..-+.++||||+|||++||+|+||||+||+++++++ ++++++||+.|++.|+++|||||||++++..+..+++++++.
T Consensus 5 ~~~~~~~~l~~a~pYi~~~r~ktiVIKlGGsvl~~~~~~~~l~~dia~L~~~G~~vVlVhGg~~~i~~~l~~~~~~~~~~ 84 (291)
T d2ap9a1 5 PTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFK 84 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCCS
T ss_pred ChhhHHHHHHHHhHHHHHhCCCEEEEEECcHHhcCHHHHHHHHHHHHHHHHCCCEEEEEeCCccccchhHHHcCCCcccc
Confidence 4567999999999999999999999999999999876 688999999999999999999999999999999999999999
Q ss_pred CCccCCCHHHHHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCc---ccCcCCcce
Q 007275 158 GRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGAT 233 (609)
Q Consensus 158 ~g~rvt~~~~l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~---~~~~d~g~~ 233 (609)
++.|+|+.++++.+ ++..+..+..+.+.+ ..+|.. ++++...+.++..+.+... .++.|++++
T Consensus 85 ~~~r~t~~~~~~~v~~~~~~~~~~~~~~~~---------~~~g~~----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (291)
T d2ap9a1 85 GGFRVTTPEVLDVARMVLFGQVGRELVNLI---------NAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGLV 151 (291)
T ss_dssp SSSCCBCHHHHHHHHHHHHHTHHHHHHHHH---------TTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBSE
T ss_pred cccccCcHHHHHHHHHhhhhHHHHHHHHHH---------HhcCCc----cccchhhhcccccccccccccccccccceee
Confidence 99999999999988 677788888888864 556665 7888899998888777542 356789999
Q ss_pred eeEeeeCHHHHHHHHhCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccCC----CCccccccCH
Q 007275 234 GEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTL 309 (609)
Q Consensus 234 G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~~----~~~lI~~it~ 309 (609)
|.++.++.+.|+.+|+.|.|||++|++++++|+.+|+|+|.+|+++|.+|+||+||||||+||++. ..++++.++.
T Consensus 152 G~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~n~d~D~lAa~lA~~l~AdkLI~LTdv~Gv~~~~~~~~~~~~~~~~ 231 (291)
T d2ap9a1 152 GDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDT 231 (291)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEEH
T ss_pred cccccchHHHHHHHHhcCCCcccCccccCCccccccccHHHHHHHHHHhcCCcEEEEeeccCcccccccccccccccCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999843 2567788888
Q ss_pred HHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCcccccccccc
Q 007275 310 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 389 (609)
Q Consensus 310 ~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g 389 (609)
.+++++++.. +| |
T Consensus 232 ~~~~~~~~~~-------------------------------------------------------~g-G----------- 244 (291)
T d2ap9a1 232 GTLAQLLPTL-------------------------------------------------------EL-G----------- 244 (291)
T ss_dssp HHHHHHGGGS-------------------------------------------------------CT-T-----------
T ss_pred HHHHHHHhhh-------------------------------------------------------hC-c-----------
Confidence 8888775321 23 5
Q ss_pred ccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 390 ~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
|.+||++|.+||++||+||||+||+.+++||.|||+++|+||+|.+
T Consensus 245 ----------M~~Kl~aA~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~GT~I~r 290 (291)
T d2ap9a1 245 ----------MVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVR 290 (291)
T ss_dssp ----------THHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEEC
T ss_pred ----------hHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCceEEec
Confidence 9999999999999999999999999999999999999999999864
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=1e-36 Score=316.22 Aligned_cols=259 Identities=16% Similarity=0.112 Sum_probs=203.4
Q ss_pred CCeEEEEeCCcccCCCC-----------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHH
Q 007275 99 GGTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-----------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (609)
||+||||+|||+|+++. +++++++|+.|++.|+++|||||||||++..+.++++++.+.++.|+|+...
T Consensus 1 ~KrIVIKiGgs~l~~~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vVlVhGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~ 80 (313)
T d1e19a_ 1 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVA 80 (313)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred CCEEEEEeChHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCCccccCCCcccccHHH
Confidence 79999999999998763 4678999999999999999999999999999999999999999999999988
Q ss_pred HHHH-HHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcce----eEEEe-----ecCCceeeeeecC------------c-
Q 007275 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVS-----VASGNFLAAKRKG------------V- 224 (609)
Q Consensus 168 l~~~-~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~----av~l~-----~~d~~~l~ak~~~------------~- 224 (609)
+..+ +...+.++..+...+ ..++++.... +..+. ..++....++... .
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 151 (313)
T d1e19a_ 81 GAMSQGWIGYMIQQALKNEL---------RKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWI 151 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------HHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HhccccHHhhHHHHhhhhhhHHHHhhccCceeehhhhhhHHHHHHhhcCce
Confidence 8887 667777777777753 5555553221 12222 2233333332210 0
Q ss_pred -------ccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCCccCC--------CCcEEEecHHHHHHHHHHHcCCCEEE
Q 007275 225 -------VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS--------SGEVLNCNTYEVATACALAIEADKLI 289 (609)
Q Consensus 225 -------~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~~~~~--------~ge~~~id~D~lAa~lA~~L~Ad~LI 289 (609)
....+.+..+.++.++.+.|..+++++.+|++++.+..+ +|+.+|+|+|++|+.+|.+|+||+||
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~v~~~~i~~~~~~~~i~vl~~~~~~~v~~~~~~~~G~~~ninaD~lAa~vA~~l~Ad~LI 231 (313)
T d1e19a_ 152 VKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFM 231 (313)
T ss_dssp EEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEE
T ss_pred eeeccCccceeeccCCCceeEecccceeeccccchhhhhccCCCCCccccCCCcCceEEecchhHHHHHHHHHHHHHHHH
Confidence 011123445667889999999999999999999766533 68999999999999999999999999
Q ss_pred EEeccccc-----CCCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCccccccc
Q 007275 290 CIIDGPIL-----DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (609)
Q Consensus 290 iLTDvdgv-----~~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (609)
|||||||+ ++++++|++++.+|+++++..+.
T Consensus 232 lLTdv~Gv~~~~~~~~~~~i~~l~~~e~~~li~~g~-------------------------------------------- 267 (313)
T d1e19a_ 232 ILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH-------------------------------------------- 267 (313)
T ss_dssp EEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC--------------------------------------------
T ss_pred hccCCcceeccCCCcccceeeeCCHHHHHHHhhCCC--------------------------------------------
Confidence 99999998 35689999999999999875421
Q ss_pred ccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+++| | |.+||+||..|++.|+++|+|.+. +. +.+++.+ +.||+|.
T Consensus 268 --------~~~G-G---------------------M~~Kv~aA~~a~~~Gv~~v~I~~~---~~-i~~~l~g-~~GT~i~ 312 (313)
T d1e19a_ 268 --------FKAG-S---------------------MGPKVLAAIRFIEWGGERAIIAHL---EK-AVEALEG-KTGTQVL 312 (313)
T ss_dssp --------SCTT-T---------------------HHHHHHHHHHHHHHTCSEEEEEEG---GG-HHHHHTT-SSSEEEE
T ss_pred --------cccC-C---------------------hHHHHHHHHHHHHhCCCEEEECCh---HH-HHHHHCC-CCCCEEc
Confidence 3345 5 999999999999999999999653 32 5677765 5899997
Q ss_pred c
Q 007275 445 S 445 (609)
Q Consensus 445 ~ 445 (609)
|
T Consensus 313 P 313 (313)
T d1e19a_ 313 P 313 (313)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Probab=100.00 E-value=4.7e-35 Score=302.46 Aligned_cols=259 Identities=14% Similarity=0.115 Sum_probs=191.1
Q ss_pred CCeEEEEeCCcccCCCC---------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~---------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
|||||||+|||+|++++ +++++++|+.|++.|+++|||||||||++..+.+++..+.+..+.|.++...+.
T Consensus 1 gk~iVIK~GGsal~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vViVHGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (307)
T d1b7ba_ 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAM 80 (307)
T ss_dssp CCEEEEEECHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHH
T ss_pred CCEEEEEEChhhhCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcCCCCcccccccccchHHHH
Confidence 79999999999998753 578999999999999999999999999998888887776666666666665555
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCC--------------------cceeEEEeecCCceeeeeecCc-----
Q 007275 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS--------------------RWHEVGVSVASGNFLAAKRKGV----- 224 (609)
Q Consensus 170 ~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~--------------------~~~av~l~~~d~~~l~ak~~~~----- 224 (609)
........+...+.... .....+. ...++++...+++...+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 151 (307)
T d1b7ba_ 81 TQGSIGYWLSNALNQEL---------NKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKED 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHTTCCCEEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhhhhHHHH---------hhcccchhhhhhhhhhhHHHHHHHHHccCcceeeecccchHHHHHHhhcceecc
Confidence 54333333333333221 1111111 1113344333332222111110
Q ss_pred ---ccCcCCcceeeEeeeCHHHHHHHHhCCCeEEEcCC------ccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEeccc
Q 007275 225 ---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295 (609)
Q Consensus 225 ---~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPVi~~~------~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvd 295 (609)
....+.++.+.++.++.+.+..+++.+.||++.++ +.+.+|+++|+|+|++|+++|.+|+||+||||||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~ninaD~lAa~iA~~l~Ad~Li~lTdv~ 231 (307)
T d1b7ba_ 152 AGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVD 231 (307)
T ss_dssp TTTEEEEEECCCCEEEETTHHHHHHHHHTTEEEECSGGGCEEEETTTTEECSCCCCHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred ccccceeecCcCceeeeechhhhhhhhhcCceeeccCCccccccccCCCCcEEecchhHHHHHHHHHhhhhheeeccccC
Confidence 11122345566778899999999999999998764 456679999999999999999999999999999999
Q ss_pred ccC-----CCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCC
Q 007275 296 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (609)
Q Consensus 296 gv~-----~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (609)
|++ +++++++.++.+|+++++..+.
T Consensus 232 Gv~~~~~~~~~~~i~~l~~~e~~~l~~~g~-------------------------------------------------- 261 (307)
T d1b7ba_ 232 YVCINYGKPDEKQLTNVTVAELEEYKQAGH-------------------------------------------------- 261 (307)
T ss_dssp SCEETTTSTTCEECSEEEHHHHHHHHHTTC--------------------------------------------------
T ss_pred ceeeCCCcccccccccCCHHHHHHHHHCCC--------------------------------------------------
Confidence 983 3567899999999999976531
Q ss_pred cccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccc
Q 007275 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (609)
Q Consensus 371 ~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i 443 (609)
+++| | |.|||+||..|+++|+.++||+++. +.|.|+|+++++||+|
T Consensus 262 --~~~G-G---------------------M~pKl~aA~~al~~Gv~~~~ii~~~---~~l~~l~~~~~~GT~I 307 (307)
T d1b7ba_ 262 --FAPG-S---------------------MLPKIEAAIQFVESQPNKQAIITSL---ENLGSMSGDEIVGTVV 307 (307)
T ss_dssp --SCTT-T---------------------HHHHHHHHHHHHTTSTTCEEEEECH---HHHTTCSSCSCEEECC
T ss_pred --cccC-C---------------------hHHHHHHHHHHHHcCCCeEEEECCH---HHHHHHHcCCCCCCCC
Confidence 3345 5 9999999999999999999999763 2588999999999986
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-32 Score=272.35 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=213.1
Q ss_pred CCeEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCe-EEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-HHHH
Q 007275 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAA 175 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~-vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~ 175 (609)
.++||||+||++|++++ +++++++|+.|++.|++ +|||||+|++++.+++++++++++..+.++++...+..+ ++..
T Consensus 2 m~~IVIKiGgs~lt~~~~~~~~~~~ia~l~~~g~~~vvvvhG~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1gs5a_ 2 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALA 81 (258)
T ss_dssp CCCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHH
T ss_pred CCCEEEEECchhccCHHHHHHHHHHHHHHHHCCCceEEEECCCchhhhcchhhhccccccccccchhhHHHHHHHHHHHH
Confidence 47899999999999876 88999999999999987 899999999999999999999999999999999999887 6777
Q ss_pred HHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEE
Q 007275 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (609)
Q Consensus 176 g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPV 255 (609)
+.++..++.. +...+.+ +..+...+.++..... ...++.+.+++..++...+..+++.+.+|+
T Consensus 82 ~~~~~~~~~~---------~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~i~v 144 (258)
T d1gs5a_ 82 GTANKTLLAW---------AKKHQIA----AVGLFLGDGDSVKVTQ----LDEELGHVGLAQPGSPKLINSLLENGYLPV 144 (258)
T ss_dssp THHHHHHHHH---------HHHTTCC----EEEECTTGGGCEEEEE----CCGGGBSBEEEEECCCHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHH---------HhccCcc----cccccccccccccccc----ccccccccccccccccchHHHHHhcccccc
Confidence 7888888775 3666765 5666666655555433 235678899999999999999999999999
Q ss_pred EcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccc-cCCCCccccccCHHHHHHHHHhhchhhhhHhhhhhhhh
Q 007275 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPI-LDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVA 334 (609)
Q Consensus 256 i~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdg-v~~~~~lI~~it~~e~~~l~~~~~~~~~~~~~~~~~~~ 334 (609)
+.+++.++++++.++++|.+++.+|..++|++++ +||+++ ++.+...++.++..+...+...+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~a~~~a~~l~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 208 (258)
T d1gs5a_ 145 VSSIGVTDEGQLMNVNADQAATALAATLGADLIL-LSDVSGILDGKGQRIAEMTAAKAEQLIEQG--------------- 208 (258)
T ss_dssp ECSEEECTTSCEEECCHHHHHHHHHHHHTCEEEE-EESSSSCBCTTSCBCCEECHHHHHHHHHTT---------------
T ss_pred ccccccccCCcEEEechhhhhhhHHHHHHhhhhh-hcccccccccccccccccchHHHHHHHhCC---------------
Confidence 9999999999999999999999999999999765 566665 45677788888877766654321
Q ss_pred cccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHHHHHHcC
Q 007275 335 EEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414 (609)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~~a~~~G 414 (609)
+.+| | |.+||+||..|++.|
T Consensus 209 --------------------------------------~~tG-G---------------------M~~Kl~aA~~a~~~G 228 (258)
T d1gs5a_ 209 --------------------------------------IITD-G---------------------MIVKVNAALDAARTL 228 (258)
T ss_dssp --------------------------------------CSCT-H---------------------HHHHHHHHHHHHHHH
T ss_pred --------------------------------------cccc-h---------------------HHHHHHHHHHHHHcC
Confidence 2234 5 999999999999999
Q ss_pred CCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 415 v~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+++|||+||+.++ +|.++|++++.||+|.
T Consensus 229 v~~v~I~~g~~~~-~L~~l~~g~~~GT~i~ 257 (258)
T d1gs5a_ 229 GRPVDIASWRHAE-QLPALFNGMPMGTRIL 257 (258)
T ss_dssp TSCEEEEESSCGG-GHHHHHTTCCSSEEEC
T ss_pred CCEEEEEeCCCch-HHHHHhcCCCCceEEe
Confidence 9999999999877 6889999999999985
|
| >d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Glutamate 5-kinase species: Campylobacter jejuni [TaxId: 197]
Probab=99.94 E-value=1.2e-26 Score=232.41 Aligned_cols=233 Identities=15% Similarity=0.132 Sum_probs=163.7
Q ss_pred CeEEEEeCCcccCCCC------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHH-H
Q 007275 100 GTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-M 172 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~ 172 (609)
|+||||+||++|++++ +++++++|+.|.+ ++++||||||| +..+...+++... .....+++ .
T Consensus 1 krIViKlGGs~it~k~~~~~~~l~~~~~~I~~l~~-~~~~vIV~gGa--~~~G~~~~~~~~~--------~~~~~~~~~~ 69 (250)
T d2akoa1 1 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLME-KYEVILVTSAA--ISAGHTKLDIDRK--------NLINKQVLAA 69 (250)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHH-HSEEEEEECCH--HHHHHHHCCCCSS--------SHHHHHHHHH
T ss_pred CEEEEEeccCeeeCCCCcCHHHHHHHHHHHHHHHc-CCeEEEEEcCc--ccccccccccccc--------hhhhhhhhhc
Confidence 6899999999999764 5689999999876 89999999885 4444466776542 22223333 2
Q ss_pred HHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCC
Q 007275 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (609)
Q Consensus 173 ~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~ 252 (609)
..+..+...+.. .|..+|.. ++........+.. ........+.+..+++.+.
T Consensus 70 ~g~~~~~~~~~~---------~l~~~~~~----~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~ 121 (250)
T d2akoa1 70 IGQPFLISVYNE---------LLAKFNKL----GGQILLTGKDFDS---------------RKATKHAKNAIDMMINLGI 121 (250)
T ss_dssp HHHHHHHHHHHH---------HHGGGTCC----EEEEEECTGGGGC---------------HHHHHHHHHHHHHHHHTTC
T ss_pred ccchhHHHHHHH---------Hhhhcccc----cccccccccchhh---------------hhhhhhhhHHHHHHHHhCc
Confidence 223333333333 35677765 4443333322211 1122345678999999999
Q ss_pred eEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCH--HHHHHHHHhhchhh
Q 007275 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQS 323 (609)
Q Consensus 253 IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~--~e~~~l~~~~~~~~ 323 (609)
+||++++.....++..++++|.+|+++|..++|++|+++|||||++ +++++|++++. ++...+..
T Consensus 122 ipv~~~~~~~~~~~~~~~~~D~~A~~lA~~~~a~~li~~tdVdGVyd~dP~~~~~Ak~i~~It~~~~~~~~~~~------ 195 (250)
T d2akoa1 122 LPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATI------ 195 (250)
T ss_dssp EEEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC----------
T ss_pred ccccccCccccccccccccchhhHHHHHHhcccceeeeccCCCceeeCCCcccccccchhhccccchHHhhhhc------
Confidence 9999998887778888999999999999999999999999999984 56899999984 22222211
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
..++.++|| | |.+|
T Consensus 196 --------------------------------------------~~~s~~~tG-G---------------------M~~K 209 (250)
T d2akoa1 196 --------------------------------------------KTGSEHGTG-G---------------------IVTK 209 (250)
T ss_dssp -------------------------------------------------CBSC-H---------------------HHHH
T ss_pred --------------------------------------------ccCCCCCCC-c---------------------hHHH
Confidence 123445566 6 9999
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcC-CCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD-GMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~-g~GT~i~ 444 (609)
|+||..+.++|++ |+|+||+.++.|...|.+++ ..||.|.
T Consensus 210 l~aa~~~~~~gi~-v~I~nG~~~~~l~~~l~~~~~~~GTv~~ 250 (250)
T d2akoa1 210 LKAAKFLLEHNKK-MFLASGFDLSVAKTFLLEDKQIGGTLFE 250 (250)
T ss_dssp HHHHHHHHHTTCE-EEEEESSSCHHHHHHHHSCCCCSSEEEC
T ss_pred HHHHHHHHHCCCC-EEEecCCCccHHHHHHhCCCCCCceEeC
Confidence 9999999999996 99999999998776665553 4699884
|
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.93 E-value=1.4e-25 Score=221.13 Aligned_cols=212 Identities=14% Similarity=0.124 Sum_probs=152.1
Q ss_pred eEEEEeCCcccCCCC-----hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHHHHHHHH
Q 007275 101 TFVVIISGEIVSSPY-----LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-----l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~ 175 (609)
+||||+||++|++++ +++++++|+.+.+ +.++|||||||.+.+......... . .+....+......
T Consensus 2 rIViKiGGs~l~~~~~~~~~i~~l~~~I~~l~~-~~~~viV~ggG~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~ 72 (225)
T d2brxa1 2 RIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKF-------N-SSETFKDFIGIQI 72 (225)
T ss_dssp EEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTT-------T-CCHHHHHHHHHHH
T ss_pred eEEEEeehhhcCCCCCCHHHHHHHHHHHHHHHc-CCcEEEEECccHHHHHHHHhhhhc-------c-hhhHHHHHhhhhH
Confidence 699999999998754 5788899988876 789999999998876654322110 0 1222223333444
Q ss_pred HHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEE
Q 007275 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (609)
Q Consensus 176 g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPV 255 (609)
..++..+... .|...+++. . ..+......+++.+.|||
T Consensus 73 ~~~~~~~~~~--------~l~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~ipv 110 (225)
T d2brxa1 73 TRANAMLLIA--------ALREKAYPV---------V-------------------------VEDFWEAWKAVQLKKIPV 110 (225)
T ss_dssp HHHHHHHHHH--------HHGGGBCSS---------C-------------------------BCSHHHHHHHHHTTCBCE
T ss_pred HHHHHHHHHH--------HHHhhhccc---------c-------------------------cccHHHHHHHHHhccccc
Confidence 4555554443 245555541 0 012334556899999999
Q ss_pred EcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHhh
Q 007275 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (609)
Q Consensus 256 i~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~~~~ 328 (609)
+++++. +.++|.+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++...+.
T Consensus 111 ~~~~~~-------~~~~D~lAa~lA~~l~Ad~lii~TDVdGVyt~dP~~~~~Ak~i~~i~~~e~~~~~~~~~-------- 175 (225)
T d2brxa1 111 MGGTHP-------GHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGI-------- 175 (225)
T ss_dssp ECCCST-------TCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC----------
T ss_pred ccCCCC-------CcchhHHHHHHHHHhCchhhhhhhhhhhhhhcccccccccccceEEecchHHHHhccCc--------
Confidence 998654 346899999999999999999999999983 5789999999999888765432
Q ss_pred hhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHH
Q 007275 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (609)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~ 408 (609)
+..++| | |.+|+ ||.
T Consensus 176 ------------------------------------------~~~g~g-g---------------------~~~k~-Aa~ 190 (225)
T d2brxa1 176 ------------------------------------------EKAGSS-S---------------------VIDPL-AAK 190 (225)
T ss_dssp -------------------------------------------------C---------------------CSCHH-HHH
T ss_pred ------------------------------------------cccCCC-C---------------------cccHH-HHH
Confidence 123345 5 88888 778
Q ss_pred HHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 409 ~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.|.++|++ ++|+||..++. |.+++.++.+||+|.|
T Consensus 191 ~a~~~gi~-v~I~ng~~~~~-l~~~l~ge~~GT~i~P 225 (225)
T d2brxa1 191 IIARSGIK-TIVIGKEDAKD-LFRVIKGDHNGTTIEP 225 (225)
T ss_dssp HHHHHTCC-EEEECHHHHTC-HHHHHTTCSSSEEECC
T ss_pred HHHHCCCc-EEEEeCCCcch-HHHHHCCCCCCcEecC
Confidence 88999997 99999999996 5588899999999975
|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=2.5e-23 Score=203.96 Aligned_cols=206 Identities=18% Similarity=0.153 Sum_probs=146.1
Q ss_pred eEEEEeCCcccCCCC--hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHH---HcCCcccccCCccCCCHHHHHHHHHHH
Q 007275 101 TFVVIISGEIVSSPY--LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEAA 175 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~--l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~---~~g~~~~~~~g~rvt~~~~l~~~~~~~ 175 (609)
+||||+|||+|+++. +.+++++|+.+++. .++|||||||...+.... .++. +....+......
T Consensus 2 rIViKiGgs~l~~~~~~i~~la~~i~~l~~~-~~~vIVvsgG~~ar~~~~~~~~~~~-----------~~~~~~~~~~~~ 69 (219)
T d2ij9a1 2 KVVLSLGGSVLSNESEKIREFAKTIESVAQQ-NQVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIAA 69 (219)
T ss_dssp EEEEEECSSTTTTCHHHHHHHHHHHHHHHHH-SEEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHH
T ss_pred EEEEEecccccCCcHHHHHHHHHHHHHHHcC-CcEEEEECCCccccchhhhhhhcCc-----------cHHHHHHHHHHH
Confidence 799999999998754 78999999998875 489999999987654432 2222 223333333333
Q ss_pred HHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhCCCeEE
Q 007275 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (609)
Q Consensus 176 g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~G~IPV 255 (609)
..++..+.+.+ |...+.. ...+....+++++.+.+||
T Consensus 70 ~~~~~~~~~~~--------l~~~~~~-----------------------------------~~~~~~~~~~l~~~~~v~v 106 (219)
T d2ij9a1 70 TRLNAMLLISA--------IPSAAKK-----------------------------------VPVDFMEAEELSKLYRVVV 106 (219)
T ss_dssp HHHHHHHHHHH--------CTTBCSS-----------------------------------CCSSHHHHHHHHTTCSEEE
T ss_pred HHhhHHHHHHH--------hhhccch-----------------------------------hhHHHHHHHHHhccCCceE
Confidence 34444433321 2333322 1224456778999999998
Q ss_pred EcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHhh
Q 007275 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (609)
Q Consensus 256 i~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~~~~~~ 328 (609)
+.+. .-+.++|.+|+.+|..++||+||++|||||++ |++++|++++.+|+.++...+
T Consensus 107 ~~~~-------~~~~stD~laa~vA~~l~Ad~liilTDVDGvYt~dP~~~~~A~~i~~is~~e~~~~~~~~--------- 170 (219)
T d2ij9a1 107 MGGT-------FPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS--------- 170 (219)
T ss_dssp ECCC-------SSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC----------
T ss_pred ECCC-------CCCCcccHHHHHHHHHcCchHhhhccCcccccccccccCcccccccccCHHHHHHHhhcc---------
Confidence 8642 22457899999999999999999999999984 568999999998876653211
Q ss_pred hhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHHHHHHH
Q 007275 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (609)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~kl~aa~ 408 (609)
+..++| | |.+|++||.
T Consensus 171 ------------------------------------------~~~~~g-g---------------------~~~k~~Aa~ 186 (219)
T d2ij9a1 171 ------------------------------------------SAKAGT-N---------------------VVIDLLAAK 186 (219)
T ss_dssp ----------------------------------------------CC-C---------------------CCSCHHHHH
T ss_pred ------------------------------------------CccCCC-C---------------------CcchHHHHH
Confidence 112223 4 888999999
Q ss_pred HHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 409 ~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.|.++|++ ++|++|+ +++ +..++.++.+||.|.
T Consensus 187 ~a~~~gi~-~~I~~g~-~~n-i~~~l~Ge~vGT~Is 219 (219)
T d2ij9a1 187 IIERSKIK-TYVILGT-PEN-IMKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHHHTCC-EEEEECC-HHH-HHHHHTTCCCSEEEC
T ss_pred HHHHcCCc-EEEecCC-CcH-HHHHHCCCCCceEeC
Confidence 99999998 8999997 555 557778889999974
|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Neisseria meningitidis [TaxId: 487]
Probab=99.86 E-value=2.9e-20 Score=182.84 Aligned_cols=218 Identities=15% Similarity=0.091 Sum_probs=146.2
Q ss_pred cCCeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCcccccCCccCCCHHHHH
Q 007275 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 98 ~~k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (609)
+-|+|||||||++|++++ +.+++++|+.|++.|++||+|+||+...+......... +.....
T Consensus 3 k~krIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vviVssG~~~~~~~~~~~~~~----------~~~~~~ 72 (236)
T d1ybda1 3 KYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSM----------DRATAD 72 (236)
T ss_dssp SCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTS----------CHHHHH
T ss_pred CCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccccccccccc----------ccchhh
Confidence 448999999999997642 68899999999999999999999987766554433221 112222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHh
Q 007275 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (609)
Q Consensus 170 ~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~ 249 (609)
............+... .+...+.. ........... .........+...++
T Consensus 73 ~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~~~------------------~~~~~~~~~~~~~~~ 122 (236)
T d1ybda1 73 YMGMMATVMNALALKD--------AFETLGIK----ARVQSALSMQQ------------------IAETYARPKAIQYLE 122 (236)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCBSS------------------SCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHhcCcc----hhhhhhhhhhh------------------hhhhHHHHHHHhhhc
Confidence 2221222222222221 12333332 22221111000 011345567777888
Q ss_pred CCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchh
Q 007275 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (609)
Q Consensus 250 ~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~ 322 (609)
.+.+|++...+ +..+.|+|.+|+++|..++||.|+++|||||++ +++++++.++.+|... .
T Consensus 123 ~~~~~~~~~~~-----~~~~gdnD~laa~vA~~~~ad~liilTdVdGvy~~dP~~~~~a~~~~~~~~~e~~~---~---- 190 (236)
T d1ybda1 123 EGKVVIFAAGT-----GNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALL---K---- 190 (236)
T ss_dssp TTCEEEEESTT-----SSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHH---T----
T ss_pred cCceecccccc-----ccccccchHHHHHHHHHhCccceeeccCccchhhccccccccceeeccccHHHHHh---c----
Confidence 99888876543 345789999999999999999999999999983 5678888887665321 1
Q ss_pred hhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHH
Q 007275 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (609)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~ 402 (609)
++| | |.+
T Consensus 191 ---------------------------------------------------g~~-~---------------------m~~ 197 (236)
T d1ybda1 191 ---------------------------------------------------NLK-V---------------------MDA 197 (236)
T ss_dssp ---------------------------------------------------TCC-S---------------------SCH
T ss_pred ---------------------------------------------------Cch-H---------------------HHH
Confidence 122 3 644
Q ss_pred HHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 403 kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
.||..|.++|++ ++|+||+.++. |..++.++.+||+|.
T Consensus 198 --~Aa~~a~~~gi~-v~I~ng~~~~~-i~~~l~Ge~vGTlIh 235 (236)
T d1ybda1 198 --TAFALCRERKLN-IVVFGIAKEGS-LKRVITGEDEGTLVH 235 (236)
T ss_dssp --HHHHHHHHTTCC-EEEECTTSTTH-HHHHHHTCSCSEEEE
T ss_pred --HHHHHHHHCCCc-EEEEeCCCccH-HHHHHcCCCCCcEeC
Confidence 488899999998 99999999995 667778888999984
|
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Haemophilus influenzae [TaxId: 727]
Probab=99.85 E-value=3.1e-20 Score=183.17 Aligned_cols=215 Identities=17% Similarity=0.122 Sum_probs=143.0
Q ss_pred CeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHH-HHHcCCcccccCCccCCCHHHHHH
Q 007275 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAA 170 (609)
Q Consensus 100 k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~~ 170 (609)
|||||||||++|++++ +.+++++|+.|++.|+++++|+||+...+.. +...+.+ ......
T Consensus 6 kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg~~~~~~~~l~~~~~~-----------~~~~~~ 74 (236)
T d2a1fa1 6 KRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMN-----------RVVGDH 74 (236)
T ss_dssp SEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCC-----------HHHHHH
T ss_pred cEEEEEEccceecCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecccccchhhhhhhcCCC-----------chhhHH
Confidence 7999999999998542 6889999999999999999999986554332 2222221 111111
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHHhC
Q 007275 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (609)
Q Consensus 171 ~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL~~ 250 (609)
........+..+.+.+ +...... .......... ..........+..+++.
T Consensus 75 ~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~ 124 (236)
T d2a1fa1 75 MGMLATVMNGLAMRDS--------LFRADVN----AKLMSAFQLN------------------GICDTYNWSEAIKMLRE 124 (236)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHTTCC----EEEEESSCCT------------------TTSEECCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH--------HHhhccc----cchhhhhhhh------------------hhHHHhhhhhhhhhhhh
Confidence 1111111222222211 1111211 1111111100 00123345567788899
Q ss_pred CCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 007275 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (609)
Q Consensus 251 G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~~~ 323 (609)
+.+|++...+ ++.+.|||.+|+.+|.+++||.|+++|||||++ ++++++++++.+|+.+ .
T Consensus 125 ~~~~~~~~~~-----~~~~~dnD~laa~vA~~~~Ad~lii~TDVdGvyt~dP~~~~~A~~i~~i~~~e~l~---~----- 191 (236)
T d2a1fa1 125 KRVVIFSAGT-----GNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVID---K----- 191 (236)
T ss_dssp TCEEEEESTT-----SCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHH---T-----
T ss_pred cccccccccc-----cCCCCCCcHHHHHHHHHhchhHHHHhhcccccccccccccccccccccccHHHHHh---c-----
Confidence 9999887643 345679999999999999999999999999984 4688899988765421 1
Q ss_pred hhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCHHH
Q 007275 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (609)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~~k 403 (609)
| + |..|
T Consensus 192 ----------------------------------------------------G-~---------------------~v~k 197 (236)
T d2a1fa1 192 ----------------------------------------------------E-L---------------------KVMD 197 (236)
T ss_dssp ----------------------------------------------------T-C---------------------CSSC
T ss_pred ----------------------------------------------------C-C---------------------ceeH
Confidence 2 3 5668
Q ss_pred HHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCccccc
Q 007275 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (609)
Q Consensus 404 l~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~ 444 (609)
+.||..|.++|++ ++|+||..++. |.++++++..||+|.
T Consensus 198 ~~Aa~~a~~~gi~-v~I~ng~~~~~-l~~~l~Ge~~GTlI~ 236 (236)
T d2a1fa1 198 LSAFTLARDHGMP-IRVFNMGKPGA-LRQVVTGTEEGTTIC 236 (236)
T ss_dssp HHHHHHHHHHTCC-EEEEETTSTTH-HHHHHTCSCSSEEEC
T ss_pred HHHHHHHHHCCCe-EEEEeCCCCcH-HHHHHcCCCCcceeC
Confidence 9999999999997 99999999995 667888899999873
|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Streptococcus pyogenes [TaxId: 1314]
Probab=99.78 E-value=2.8e-18 Score=167.90 Aligned_cols=217 Identities=15% Similarity=0.108 Sum_probs=137.7
Q ss_pred CCeEEEEeCCcccCCCC--------hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHH-cCCcccccCCccCCCHHHHH
Q 007275 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE-RGHEAKYLGRYRITDSESLA 169 (609)
Q Consensus 99 ~k~iVIKlGGsvl~~~~--------l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~-~g~~~~~~~g~rvt~~~~l~ 169 (609)
.|+|||||||++|++++ +++++++|+.|++.|++||+|+||+......... .+. ......
T Consensus 4 ~krIViKiGgs~lt~~~~~~l~~~~l~~ia~~I~~l~~~g~~Vv~v~~g~~~~~~~~~~~~~~-----------~~~~~~ 72 (238)
T d1z9da1 4 YQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGM-----------DRVQAD 72 (238)
T ss_dssp CSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTC-----------CHHHHH
T ss_pred CCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccceeccccCC-----------cchhHH
Confidence 48999999999998643 6889999999999999999999997665443221 111 111111
Q ss_pred H-HHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeEEEeecCCceeeeeecCcccCcCCcceeeEeeeCHHHHHHHH
Q 007275 170 A-AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (609)
Q Consensus 170 ~-~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~~~~I~~LL 248 (609)
. ....+......... .+..+++. .............. .......+....
T Consensus 73 ~~~~~~~~~~~~~~~~---------~~~~~~i~----~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~ 122 (238)
T d1z9da1 73 YTGMLGTVMNALVMAD---------SLQHYGVD----TRVQTAIPMQNVAE-----------------PYIRGRALRHLE 122 (238)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHTTTCC----EEEEESSCBTTTBE-----------------ECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHhhCCcc----chhhhhhhhHHHHh-----------------hhhHHHHHhhhc
Confidence 1 22223333222222 24566665 22222221111100 011223444433
Q ss_pred hCCCeEEEcCCccCCCCcEEEecHHHHHHHHHHHcCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhch
Q 007275 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (609)
Q Consensus 249 ~~G~IPVi~~~~~~~~ge~~~id~D~lAa~lA~~L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~~ 321 (609)
... +++.... .+.....|+|.+++.+|..++||+++++|||||++ +++++++.++..|...
T Consensus 123 ~~~-~~~~~~~----~~~~~~~~~d~~~~~~a~~~~a~~li~~tdVdGvy~~~P~~~~~a~~~~~~~~~~~~~------- 190 (238)
T d1z9da1 123 KNR-IVVFGAG----IGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIK------- 190 (238)
T ss_dssp TTC-EEEEEST----TSCTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHT-------
T ss_pred ccc-ccceecc----eeccCCCCchHHHHHHHHHhhhhhhcccccccceecccccccccchhhccccccchhc-------
Confidence 333 3333222 22334568899999999999999999999999984 4567777776543210
Q ss_pred hhhhHhhhhhhhhcccccccCCCCCCcccccCCCCCcccccccccccCCcccCCCCCCccccccccccccchhhcccCCH
Q 007275 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (609)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~~~g~~~~~~~~~~m~ 401 (609)
.| + |.
T Consensus 191 -----------------------------------------------------~g-~---------------------~~ 195 (238)
T d1z9da1 191 -----------------------------------------------------RG-L---------------------KI 195 (238)
T ss_dssp -----------------------------------------------------TT-C---------------------CC
T ss_pred -----------------------------------------------------cC-c---------------------ch
Confidence 11 2 22
Q ss_pred HHHHHHHHHHHcCCCeEEEeecccccchhhhhhhcCCCcccccc
Q 007275 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (609)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~i~~g~~~~~ll~el~~~~g~GT~i~~ 445 (609)
.|+.||..+.++|++ ++|+||+.|+. |..+++++.+||.|..
T Consensus 196 ~k~~Aa~~a~~~gi~-v~I~nG~~p~~-i~~~l~Ge~~GTlIt~ 237 (238)
T d1z9da1 196 MDATASTLSMDNDID-LVVFNMNEAGN-IQRVVFGEHIGTTVSN 237 (238)
T ss_dssp SCHHHHHHHHHTTCE-EEEEETTSTTH-HHHHHTTCCCSEEEEC
T ss_pred hHHHHHHHHHHCCCc-EEEEeCCCcch-HHHHHCCCCCceEecc
Confidence 389999999999996 99999999996 5677789999999864
|
| >d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase RPA1999 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=99.72 E-value=3e-17 Score=151.37 Aligned_cols=137 Identities=20% Similarity=0.214 Sum_probs=103.4
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCH-------------HHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCe
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~-------------e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~ 513 (609)
..||+++++|.+.|.+++............+. +.+...+ ..+||++.|+++|||+.+.+ .
T Consensus 4 ~~IR~a~~~D~~~l~~l~~~a~~~~~~~~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~-----~ 78 (156)
T d2fiwa1 4 PALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLKG-----P 78 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEET-----T
T ss_pred cEEeeCCHHHHHHHHHHHHHHHHhhhhhcCCHHHHHhhccCCCCHHHHHHhccCceEEEEEECCEEEEEEeecc-----c
Confidence 46999999999999999876443322222222 2332222 45789999999999998862 2
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEE
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 592 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~m 592 (609)
.+|..++|+|+|||||+|++||+.++++|++.|+..+.+.+ ..+.+||+|+||+.++....+. +...-..+.|
T Consensus 79 ~~i~~l~V~p~~~g~GiG~~Ll~~~~~~a~~~g~~~l~~~~~~~A~~fY~k~GF~~~~~~~~~~------~g~~l~~~~M 152 (156)
T d2fiwa1 79 DHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSI------NGEWLANTTM 152 (156)
T ss_dssp TEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEEEEEE------TTEEEEEEEE
T ss_pred hhHHHHhccHHHcCCCHHHHHHHHHHHHHHhcCCCEEEEEeccchhHHHHhCCCEEEEEEEEeE------CCEEEEEEEE
Confidence 47999999999999999999999999999999999999987 4789999999999987654331 1111234677
Q ss_pred eecC
Q 007275 593 KKLL 596 (609)
Q Consensus 593 kkll 596 (609)
+|.|
T Consensus 153 ~K~L 156 (156)
T d2fiwa1 153 TKSL 156 (156)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7754
|
| >d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Phosphinothricin acetyltransferase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.69 E-value=2.4e-16 Score=145.22 Aligned_cols=124 Identities=23% Similarity=0.222 Sum_probs=101.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc----CccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecCC---CeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~~---~~~ 514 (609)
++||+++++|++.|.+++++...... ..+.+.+....++ ..++|++.|+++||++.+.+.... ...
T Consensus 2 i~IR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 81 (163)
T d1yr0a1 2 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 81 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEECCeEEEeecceeecccccccce
Confidence 47999999999999999887544322 2345555555444 457889999999999998864432 446
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.+..++|+|+|||+|+|++||++++++|+++|++++++.+ .++.+||+|+||+.++..
T Consensus 82 ~~~~~~v~p~~rg~Glg~~ll~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y~k~GF~~~G~~ 143 (163)
T d1yr0a1 82 REHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRF 143 (163)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeeeecccCCCCceeeeecccccccccccceEEEEEecCCHHHHHHHHHCCCEEEEEE
Confidence 7779999999999999999999999999999999999987 489999999999998764
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=4.4e-16 Score=145.48 Aligned_cols=126 Identities=16% Similarity=0.185 Sum_probs=101.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCH-------------HHHHhhc----CeEEEEEECCEEEEEEEEEEec--
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DSFYVVEREGQIIACAALFPFF-- 509 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~-------------e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~-- 509 (609)
++||+++++|++.|.++........+....+. +.+..++ ..+|+++.||++|||+.+....
T Consensus 2 i~ir~at~~D~~~l~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~ 81 (173)
T d1tiqa_ 2 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 81 (173)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHhcCCHHHHHHHHhCCCcEEEEEEECCEecceEEEEecCcc
Confidence 46999999999999999766554444333333 3333332 3578899999999999987422
Q ss_pred ----CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecc
Q 007275 510 ----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 510 ----~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~l 574 (609)
....++|..++|+|+|||+|+|++||++++++|++.|++.+++.+ .++.+||+++||+.++...+
T Consensus 82 ~~~~~~~~~~i~~i~v~~~~rgkGig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~fY~k~GF~~~g~~~~ 154 (173)
T d1tiqa_ 82 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSF 154 (173)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccCCCeEEEEEEEECHHHcCCCCCcchhHhhhhhhhhhhcchhhccccccCHHHHHHHHHCCCEEeeEEEe
Confidence 235789999999999999999999999999999999999999988 37999999999999987543
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.67 E-value=3.5e-16 Score=143.72 Aligned_cols=146 Identities=18% Similarity=0.197 Sum_probs=113.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhc-----cCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~-----~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~ 518 (609)
|..++|+++++|++.|.++.+...... ...+++.+.+.+.+ ..++|++.||++|||+.+........++|..
T Consensus 1 M~lt~R~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~~~~~~~i~~ 80 (160)
T d2i6ca1 1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGN 80 (160)
T ss_dssp CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred CceEEecCCHHHHHHHHHHHhCHHHHhhhcccccCCCCHHHHHHHHhccCCeEEEEECCEEEEEeeeeccccCCEEEEEE
Confidence 567899999999999999876543321 22345666655544 4578889999999999998777778899999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEe
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 593 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mk 593 (609)
++|+|+|||||+|++|++.++++|++. +.+.+.+.+ .++.+||+++||+.++...... .+..+...+.|+
T Consensus 81 ~~V~p~~rgkGig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~-----~~g~~~~~~~m~ 155 (160)
T d2i6ca1 81 MMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHD-----PDGRRVALIQMD 155 (160)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEC-----TTSCEEEEEEEE
T ss_pred eEeCHhHcCCcchhhhhHHHHHHHHHhccccceeeecccccchhhhHHHhCCCEEEEEEEeec-----CCCCEEEEEEEe
Confidence 999999999999999999999999875 678888776 3789999999999987553221 123344567788
Q ss_pred ecCC
Q 007275 594 KLLP 597 (609)
Q Consensus 594 kll~ 597 (609)
|.|.
T Consensus 156 k~l~ 159 (160)
T d2i6ca1 156 KPLE 159 (160)
T ss_dssp EECC
T ss_pred eeCC
Confidence 8774
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.66 E-value=1.2e-15 Score=139.68 Aligned_cols=126 Identities=20% Similarity=0.280 Sum_probs=104.6
Q ss_pred ccccCCcCCHHHHHHHHhhhH----hhcc---Cc-cCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLV----ESGA---LV-RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~----~~~~---~~-~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~i 519 (609)
+||+++++|++.|.++++... ..+. .. ....+.+..++ ..+|+++.+++++|++.+....+....++..+
T Consensus 2 ~iR~a~~~Dl~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~i~~~ 81 (157)
T d2fiaa1 2 KIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKRF 81 (157)
T ss_dssp CEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHhcCcchhhccchhHHHHHHhhccCceEEEEECCEEEEEEEEeecCccceeeeccc
Confidence 589999999999999987632 1111 11 12355565543 57889999999999999987667778999999
Q ss_pred EEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 520 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 520 aV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
+|+|+|||+|+|++||++++++|++.|++.+.+.| .++.+||+|+||+.++.....
T Consensus 82 ~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~v~e~~~~ 141 (157)
T d2fiaa1 82 ATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQM 141 (157)
T ss_dssp EECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEECCT
T ss_pred EECHHHcCCCCcchhhHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHHCCCEEeeeECCc
Confidence 99999999999999999999999999999999998 379999999999999877544
|
| >d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA4866 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=1.5e-15 Score=140.76 Aligned_cols=146 Identities=18% Similarity=0.164 Sum_probs=108.3
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhcc----CccCCHHHHHhhc-------CeEEEE-EECCEEEEEEEEEEecCC---CeE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFKE---KCG 514 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~i-------~~~~V~-~~dg~IVG~~~l~~~~~~---~~~ 514 (609)
+||+++++|++.|.+++++...... ..+.+.+++..++ ..++++ +.+++++|++.+.+.... +..
T Consensus 1 tiR~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (169)
T d1yvoa1 1 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGT 80 (169)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTTE
T ss_pred CcccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEecCCCEEEeeccccccccccccce
Confidence 5899999999999999887544332 1345666665554 235555 457899999999865432 345
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCcee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 590 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i 590 (609)
.+..++|+|+|||+|+|++|++.++++|++.|++++.+.+ .++++||+++||++++...--. ..+....+.+
T Consensus 81 ~~~~i~v~p~~rg~G~g~~l~~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~k~GF~~~g~~~~~~----~~~g~~~D~~ 156 (169)
T d1yvoa1 81 VEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVG----QKFGRWLDLT 156 (169)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEE
T ss_pred EEEEeecChhhhcCCeeeeeeeeeccccccccceEEEEEeccCcHHHHHHHhcCCcEEEEEEeeEE----EECCEEEEEE
Confidence 5668999999999999999999999999999999999988 4789999999999987652110 0111223567
Q ss_pred EEeecCCCC
Q 007275 591 YMKKLLPDT 599 (609)
Q Consensus 591 ~mkkll~~~ 599 (609)
+|.+.|+..
T Consensus 157 ~~~~~l~~~ 165 (169)
T d1yvoa1 157 FMQLNLDPT 165 (169)
T ss_dssp EEEEESCTT
T ss_pred EEEEECCCC
Confidence 787777543
|
| >d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase PA0478 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=1.3e-15 Score=139.94 Aligned_cols=121 Identities=23% Similarity=0.269 Sum_probs=97.6
Q ss_pred ccccCCcCCHHHHHHHHhhhHh---hccCccCCHHHHHhhc------CeEEEEEECCEEEEEEEEEEecC----CCeEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK----EKCGEV 516 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~---~~~~~~~~~e~l~~~i------~~~~V~~~dg~IVG~~~l~~~~~----~~~~eI 516 (609)
.||+++++|++.|.+|+.++.. ......++.+.+.+.+ ..++|++.|++++||+.+.+... ...++|
T Consensus 2 ~IR~a~~~D~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~i 81 (156)
T d2fe7a1 2 EIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIYL 81 (156)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHHHhccCCCceEEEEeeCCEEEEEEeEeecccccccCCeEEe
Confidence 6999999999999999877432 1222446677766654 24688899999999998775322 356889
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
..++|+|+|||+|+|++|+++++++|++.|+..+.+.| .++++||+++||+..+
T Consensus 82 ~~~~V~p~~Rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~ 139 (156)
T d2fe7a1 82 EDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQD 139 (156)
T ss_dssp EEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECT
T ss_pred eeeeechhhhccChHHHHHHHHHHHHHHccCCcceEEEcCCCHHHHHHHHHCCCEEcC
Confidence 99999999999999999999999999999999999988 3799999999999764
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Probab=99.63 E-value=3.4e-15 Score=140.80 Aligned_cols=142 Identities=13% Similarity=0.217 Sum_probs=103.6
Q ss_pred cccCCcCCH---HHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 451 TRTAKVTDL---SGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 451 IR~a~~~D~---~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
|+.++.+|. +.+.++.+..+...+.. ...+.+.+.. ..++++.++++++|++.+.+..+...++|..++|+|+
T Consensus 3 I~e~~~~~p~~~~~l~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~va~~~~~iig~~~~~~~~~~~~~~I~~i~V~p~ 81 (180)
T d1n71a_ 3 ISEFDRNNPVLKDQLSDLLRLTWPEEYGD-SSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVESS 81 (180)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHCTTTSSS-THHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECTT
T ss_pred EEEccccChHHHHHHHHHHHHhCCcccCc-chHHHHHHHhCCCCEEEEEEECCeEEEEEEEEEecCCCEEEEEEEEEchH
Confidence 566766664 45555544333222211 1123333333 4688899999999999888666678899999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-----------------------------HHHHHHHHCCCeEeeeecch
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-----------------------------RTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-----------------------------~a~~fYek~GF~~~~~~~lp 575 (609)
|||||+|++||++++++|++.|++.|+|.|. .+.+||+|+||+.++...
T Consensus 82 ~rg~GiG~~Ll~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~fY~k~Gf~~~g~~~-- 159 (180)
T d1n71a_ 82 RRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLP-- 159 (180)
T ss_dssp SCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEEET--
T ss_pred HhccHHHHHHHHHHHHHHHHCCCCEEEEEecCcccccchhhhhcccccccccchhccccHHHHHHHHHCCCEEEeeec--
Confidence 9999999999999999999999999999772 378999999999997642
Q ss_pred hHhhhhcccCCCceeEEeecCCCC
Q 007275 576 EERRKRINLSRNSKYYMKKLLPDT 599 (609)
Q Consensus 576 ~~~~~~y~~~~~s~i~mkkll~~~ 599 (609)
. .+....+..+|.|+|.|..
T Consensus 160 ~----~~g~~~~~~~m~k~l~~~~ 179 (180)
T d1n71a_ 160 N----ANGWDKPDIWMAKTIIPRP 179 (180)
T ss_dssp T----TTSTTCCEEEEEEECSCCC
T ss_pred C----CCCCCCCcEEEEEecCCCC
Confidence 1 2334455566667777754
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Probab=99.63 E-value=2.2e-15 Score=140.06 Aligned_cols=144 Identities=14% Similarity=0.252 Sum_probs=106.6
Q ss_pred ccccCCcCCHHHHHHHHhh---hHhhccCccCCHHHHHhhc-----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~---~~~~~~~~~~~~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV 521 (609)
.+|.++.+|.++...++.. ......+ .+..+.+.+.+ ..++|++.+|++|||+++.+..+...++|..++|
T Consensus 2 ~~r~i~~~d~~e~~~lL~~l~~if~~~lp-~~~~~y~~r~i~d~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~ei~~laV 80 (162)
T d1qsra_ 2 DFDILTNDGTHRNMKLLIDLKNIFSRQLP-KMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (162)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHHCT-TSCHHHHHHHHTSTTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHhhCcCCcEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEE
Confidence 4677888887776555444 2333222 33333333322 3578888899999999998777788999999999
Q ss_pred cccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 522 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 522 ~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
+|+|||+|+|++||+.++++|++.|++.+++.++ .+.+||+|+||+..+. .|...+..|.....+.+.|..-|
T Consensus 81 ~p~~rg~GiG~~Ll~~l~~~a~~~g~~~i~l~~~~~a~~fY~k~GF~~~~~--~~~~~~~~~~k~y~~~~~M~~~l 154 (162)
T d1qsra_ 81 TANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHR--MPQEKWKGYIKDYDGGTLMECYI 154 (162)
T ss_dssp CGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHTTCBSSCS--SCHHHHBTTBCCCTTSEEEEEEC
T ss_pred cHHHccCchHHHHHHHHHHHHHhCCCeEEEEecCCccHHHHHhCCCeeecc--CChhHhcCcccCCCCeEEEEEec
Confidence 9999999999999999999999999999999884 7889999999986543 34444444444445667775444
|
| >d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YqiY species: Bacillus subtilis [TaxId: 1423]
Probab=99.62 E-value=8.2e-16 Score=141.27 Aligned_cols=146 Identities=12% Similarity=0.146 Sum_probs=107.7
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh-cCeEEEEEECCEEEEEEEEEEe-cCCCeEEEEEEEEcccCcC
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA-LDSFYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRG 527 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~-i~~~~V~~~dg~IVG~~~l~~~-~~~~~~eI~~iaV~p~~Rg 527 (609)
+||+++.+|++.|.+++++.+..........+.+... ....||++.+++++||+..... .....+++..++|+|+|||
T Consensus 3 ~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rg 82 (157)
T d1mk4a_ 3 DIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRK 82 (157)
T ss_dssp EEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSCH
T ss_pred EEEeCCHHHHHHHHHHHHHHhcCCchhhHHHHhhhhccCceEEEEEECCEEEEEeeeeeeccCCccceeeEEEEEHHHcC
Confidence 5899999999999999887654443322222222232 3457889999999999876643 3346789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhH--hhhhcccCCC-ceeEEeec
Q 007275 528 QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEE--RRKRINLSRN-SKYYMKKL 595 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~--~~~~y~~~~~-s~i~mkkl 595 (609)
+|+|++||+.+++++++.|++++++.+ .++.+||+|+||+..+....+.. ....|+.... ..+|.|+|
T Consensus 83 ~Gig~~Ll~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~~y~g~~~d~~~~~k~l 157 (157)
T d1mk4a_ 83 MQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVKNI 157 (157)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCBEEEEEEC
T ss_pred CcccchHHHHHHHhhccccceEEEEEeccchHHHHHHHHHCCCEEeeeEeccCCceeEccCCCCCCEEEEEEEEC
Confidence 999999999999999999999999988 37899999999998765433221 2233554443 44455554
|
| >d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative phosphinothricin acetyltransferase YwnH species: Bacillus subtilis [TaxId: 1423]
Probab=99.62 E-value=1.5e-15 Score=140.28 Aligned_cols=144 Identities=24% Similarity=0.358 Sum_probs=105.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccC----ccCCHHHHHhhc------CeEEEEE-ECCEEEEEEEEEEecC----CCe
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL------DSFYVVE-REGQIIACAALFPFFK----EKC 513 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~i------~~~~V~~-~dg~IVG~~~l~~~~~----~~~ 513 (609)
.+||+++++|++.|.+++++....... .+.+.+....++ ..++++. .+++++|++.+.+... ...
T Consensus 2 ~~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 81 (165)
T d1vhsa_ 2 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 81 (165)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEecCCceEeeeeeeeccccccccce
Confidence 469999999999999998875443321 233444433333 3355555 5689999999876433 234
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCce
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 589 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~ 589 (609)
+++ .++|+|+|||+|+|++||+.++++|++.|++++.+.+ .++.+||+|+||+.++...-.. ..+....+.
T Consensus 82 ~~~-~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~D~ 156 (165)
T d1vhsa_ 82 AEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIA----EMDGKRYDL 156 (165)
T ss_dssp EEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEE
T ss_pred EEE-eeecCchhhcccccchhhhhhhhhhccccceeEEEEEecCCHHHHHHHHHCCCEEEEEEcCeE----EECCEEEEE
Confidence 455 7999999999999999999999999999999999987 4789999999999988642110 112223456
Q ss_pred eEEeecCC
Q 007275 590 YYMKKLLP 597 (609)
Q Consensus 590 i~mkkll~ 597 (609)
++|.|.|.
T Consensus 157 ~~m~k~l~ 164 (165)
T d1vhsa_ 157 KILGRELS 164 (165)
T ss_dssp EEEEEECC
T ss_pred EEEEeECC
Confidence 78887764
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Probab=99.62 E-value=1.4e-15 Score=137.57 Aligned_cols=133 Identities=20% Similarity=0.218 Sum_probs=101.1
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~R 526 (609)
..|+..+.+|.+.|.+.+.......+.. .+.... ..++|.++++++||++...+. ...++|..++|+|+||
T Consensus 4 ~~i~~~t~~~~~~I~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~V~~~~r 76 (140)
T d1y9wa1 4 KHIENGTRIEGEYIKNKVIQYNMSILTD-----EVKQPMEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESVR 76 (140)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHTSCG-----GGCCCCEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGGT
T ss_pred chhcCCcHHHHHHHHHHHHHHHHhhChH-----HHhCcccceEEEEEeCCCcEEEEEEEEEe--cCeeEEEEEEECcccc
Confidence 3688888888888887665544443321 111111 246677788999999988743 4678999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecC
Q 007275 527 GQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 596 (609)
Q Consensus 527 gqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll 596 (609)
|+|+|++||++++++|++.|++.+++.| ..|++||+|+||+.++...- |. .....++|.|-|
T Consensus 77 g~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k~GF~~~g~~~~-------~~-~~~~~~~m~K~L 140 (140)
T d1y9wa1 77 HDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED-------HP-KGHSQHFFEKRL 140 (140)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS-------CS-TTCCEEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhccceEEEEeechhhHHHHHHhCCCEEEEEECC-------CC-CCCcEEEEEeEC
Confidence 9999999999999999999999999998 36899999999999986421 22 244667776643
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Probab=99.61 E-value=4.9e-15 Score=133.55 Aligned_cols=123 Identities=16% Similarity=0.102 Sum_probs=96.8
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEec-------CCCeEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEVA 517 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~-------~~~~~eI~ 517 (609)
..||+++.+|++.+.++.+.+...... ......+...+ ..++++..+++++|++.+.... ....++|.
T Consensus 3 m~Ir~~~~~d~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 81 (147)
T d1s3za_ 3 MDIRQMNKTHLEHWRGLRKQLWPGHPD-DAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLE 81 (147)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSCH-HHHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHCCCCCc-HHHHHHHHHHhhCCCcEEEEEEECCEEEEEEEEEeecCcccccCCCCeEEEE
Confidence 359999999999999998776443221 11122222222 3567888999999999886432 23568999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.++|+|+|||+|+|++||+.++++|++.|++.+.+.+ +.+.+||+++||++++..
T Consensus 82 ~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~fY~k~GF~~~~~~ 140 (147)
T d1s3za_ 82 GIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERV 140 (147)
T ss_dssp EEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEECHHHcCCcHHHHHHHHHHHHhhhccccceEEEEcCCCHHHHHHHHHCCCEEECeE
Confidence 9999999999999999999999999999999999998 368999999999987654
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Probab=99.61 E-value=1.1e-14 Score=135.95 Aligned_cols=123 Identities=21% Similarity=0.303 Sum_probs=98.3
Q ss_pred ccccCCcCCHH----HHHHHHhhhHhh----ccCccCCHHHHHhhc-----------CeEEEEEECCEEEEEEEEEEecC
Q 007275 450 GTRTAKVTDLS----GIKQIIQPLVES----GALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK 510 (609)
Q Consensus 450 ~IR~a~~~D~~----~I~~L~~~~~~~----~~~~~~~~e~l~~~i-----------~~~~V~~~dg~IVG~~~l~~~~~ 510 (609)
.||.++.+|++ .+.+++.+.... ++..+++.++...+. ..+||+++|++|||++.+.+...
T Consensus 2 ~iR~~~~ed~~~~~~~l~~ll~d~~~~g~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~ 81 (170)
T d1ghea_ 2 QLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQK 81 (170)
T ss_dssp EEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECCS
T ss_pred ceEECCHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEeeccc
Confidence 58999999996 555555443332 355667766654332 25788899999999999886443
Q ss_pred C---CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHHHHHCCCeEeeee
Q 007275 511 E---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 511 ~---~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~fYek~GF~~~~~~ 572 (609)
. ..++|..++|+|+|||+|+|++||+.++++|+++|++.+.+.+ ..+.+||+|+||+.++..
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~l~L~~~~n~~a~~fY~k~GF~~~g~~ 149 (170)
T d1ghea_ 82 PNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGEL 149 (170)
T ss_dssp TTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEEE
T ss_pred cCCCcEEEEEEEEEcchhhcCCcHHHHHHHHHHHHHHcCCceEeeecccchHHHHHHHHCCCEEEEEe
Confidence 2 4589999999999999999999999999999999999999876 478999999999998864
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Probab=99.60 E-value=7e-16 Score=141.84 Aligned_cols=135 Identities=20% Similarity=0.263 Sum_probs=100.2
Q ss_pred cccCCcCCHHHHHHHHhhhHhhcc---C----ccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcc
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGA---L----VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~---~----~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p 523 (609)
||..+.+| +++..|+......-. + ...+.+.+...-..+|+++.||++|||+.+.+. .++.++|..++|+|
T Consensus 3 I~~~~~~~-~~i~~L~~~~~~~~~~~~p~e~~~~l~~~~l~~~~~~~~va~~~~~~vG~~~~~~~-~~~~~~i~~~~V~p 80 (151)
T d1yx0a1 3 IKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRTSA 80 (151)
T ss_dssp EEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCCST
T ss_pred eEECCCCC-HHHHHHHHHHHHHHHhcCCchhhhccCHhHccCCCeEEEEEEECCEEEEEEEEEec-cCceEEEEeeeeCH
Confidence 56555566 666666554322211 1 112445555444679999999999999998854 46789999999999
Q ss_pred cCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeec
Q 007275 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 524 ~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
+|||+|+|++||++++++|++.|++.++|.| ..|++||+|+||++++.. + .|..+..+. ||.|.
T Consensus 81 ~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~GF~~~~~~--~-----~y~~d~~~~-~m~K~ 150 (151)
T d1yx0a1 81 SHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF--A-----DYGEDPNSV-FMTKK 150 (151)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCCC--T-----TSCCCTTCC-CEEEC
T ss_pred HHHhCChhHHHHHHHHHHHHHCCCcEEEEEeccccchHHHHHHHHHcCCEECCcc--C-----CCCCCCccE-EEEEE
Confidence 9999999999999999999999999999976 268999999999998754 2 355555555 55544
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Probab=99.60 E-value=5.7e-15 Score=133.72 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=95.4
Q ss_pred cccccCCcCCHHHHHHHHhhhH----hhccCccCCHHHHHh---h----cCeEEEEEECCEEEEEEEEEEec-----CCC
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLV----ESGALVRRTDEELLK---A----LDSFYVVEREGQIIACAALFPFF-----KEK 512 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~----~~~~~~~~~~e~l~~---~----i~~~~V~~~dg~IVG~~~l~~~~-----~~~ 512 (609)
++||+++++|++.|.+++.+.. ......++..+.... . -..+++++.|++++|++.+.... ...
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iiG~~~~~~~~~~~~~~~~ 81 (150)
T d1z4ea1 2 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 81 (150)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEeCCHHHHHHHHHHHHHhhhhhccccccccchhHHHHHHHHHhcCCCcEEEEEEECCceEEEEEEEeecccCcCCCC
Confidence 4799999999999999986521 112222233222111 1 13678889999999999886422 235
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
.++|..++|+|+|||+|+|++||++++++|++.|++.+.+.+ .++.+||+|+||+..+.
T Consensus 82 ~~~i~~~~v~~~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 144 (150)
T d1z4ea1 82 RATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE 144 (150)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEE
T ss_pred EEEEEEEEcCHHHcCCChhHHHHHHHHHHHHHcCCCEEEEEEcCCCHHHHHHHHHCCCEEcce
Confidence 689999999999999999999999999999999999999988 36899999999987654
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.58 E-value=1.6e-14 Score=134.86 Aligned_cols=126 Identities=24% Similarity=0.342 Sum_probs=99.8
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhcc---CccCCHHHHHhhc-------------CeEEEEEECCEEEEEEEEEEecC---
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK--- 510 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~i-------------~~~~V~~~dg~IVG~~~l~~~~~--- 510 (609)
.||+++.+|.+.|.+++........ ......+.+...+ ..++|++.+++++|+....+...
T Consensus 2 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~e~~~~i~g~~~~~~~~~~~~ 81 (189)
T d1u6ma_ 2 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 81 (189)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred EeeeCcHHHHHHHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHhCcccccccceEEEEEEcCeEEEEEEEeccccccc
Confidence 4899999999999999987655422 1233333332222 24789999999999998764221
Q ss_pred ---------------------------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHH
Q 007275 511 ---------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 559 (609)
Q Consensus 511 ---------------------------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~ 559 (609)
.+.++|..++|+|+|||+|+|++||+.++++|++.|++.+++.+ ..+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~ 161 (189)
T d1u6ma_ 82 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 161 (189)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred cchhhhhhhhhcccccccccccccccCCCEEEEEEEEECHHHcCCCcCcchhHHHHHHHHhcCCceeEEEEcCCCHHHHH
Confidence 13478999999999999999999999999999999999999988 36899
Q ss_pred HHHHCCCeEeeeecch
Q 007275 560 WFKSRGFRECSIEMIP 575 (609)
Q Consensus 560 fYek~GF~~~~~~~lp 575 (609)
||+|+||+.++...++
T Consensus 162 ~Yek~GF~~~~~~~~~ 177 (189)
T d1u6ma_ 162 LYASKGFKDVTTMTIS 177 (189)
T ss_dssp HHHTTTCEEEEEEEET
T ss_pred HHHHCCCEEEEEEEEC
Confidence 9999999999876544
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.58 E-value=4.5e-15 Score=135.13 Aligned_cols=128 Identities=20% Similarity=0.344 Sum_probs=94.6
Q ss_pred cccccccccCCcCCHHHHHHHHhhhHhhccCccCC-HHHHH---hh----------c----CeEEEEEECCEEEEEEEEE
Q 007275 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELL---KA----------L----DSFYVVEREGQIIACAALF 506 (609)
Q Consensus 445 ~d~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~-~e~l~---~~----------i----~~~~V~~~dg~IVG~~~l~ 506 (609)
||.+ +||+++++|++.+.++++.+.......... .+.+. .. . ..+++.+.+++++|++.+.
T Consensus 2 p~~~-~IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~ 80 (157)
T d1i12a_ 2 PDGF-YIRRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNII 80 (157)
T ss_dssp CTTE-EEEECCGGGHHHHHHHHTTTSCCCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEE
T ss_pred CCCc-EEEeCCHHHHHHHHHHHHHHhhccccCHHHHHHHHHhhhhhhhHHHhhhhcccccceEEEEEEECCEEEEEEEEe
Confidence 3443 799999999999999986543322211100 01111 00 0 1234555689999999886
Q ss_pred Eec-----CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeec
Q 007275 507 PFF-----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 507 ~~~-----~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~ 573 (609)
... ....++|..++|+|+|||+|+|+.||++++++|+++|++.+++.+ ..+.+||+|+||+..+..+
T Consensus 81 ~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~l~~~~~~~~~Y~k~GF~~~g~~m 153 (157)
T d1i12a_ 81 IERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVEM 153 (157)
T ss_dssp EEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEEE
T ss_pred ccccccccCcceeEEEEEEecHhhcCCCchHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHhCCCEEeeEEE
Confidence 432 235689999999999999999999999999999999999999988 4789999999999987653
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.58 E-value=1.3e-14 Score=135.16 Aligned_cols=146 Identities=14% Similarity=0.195 Sum_probs=104.4
Q ss_pred ccccCCcCCHHHHHHHHhh---hHhhccCccCCHHHHHhhc-----CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEE
Q 007275 450 GTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~---~~~~~~~~~~~~e~l~~~i-----~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV 521 (609)
.+|.++..|.++-..++.. ...... ..+..+.+.+.+ ..++|+++++++|||+++.+..+...++|..++|
T Consensus 3 ~~r~i~~~~~~e~~~~L~~~~~if~~~l-p~~~~~~i~r~~~d~~~~~~~v~~~~~~iVG~~~~~~~~~~~~aeI~~laV 81 (164)
T d1ygha_ 3 EFRVVNNDNTKENMMVLTGLKNIFQKQL-PKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAI 81 (164)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHc-CCccHHHHHHHHhccCCceEEEEEeCCeEEEEEEEEecCCCCEEEEEEEEE
Confidence 4667777776654444433 222222 223444444332 3578888999999999998777778899999999
Q ss_pred cccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEe-ecCCC
Q 007275 522 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK-KLLPD 598 (609)
Q Consensus 522 ~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mk-kll~~ 598 (609)
+|+|||+|+|++||++++++|++.+...+.+.+ ..|.+||+|+||+..+. +|...+..|..+..+.++|. +|+|+
T Consensus 82 ~p~~rg~GiG~~L~~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k~GF~~~~~--~~~~~~~gy~kd~e~~ilM~~~l~p~ 159 (164)
T d1ygha_ 82 SSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEIT--LDKSIWMGYIKDYEGGTLMQCSMLPR 159 (164)
T ss_dssp CTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCC--SCHHHHBTTBCCTTCCEEEEEECCCC
T ss_pred CchhccCHHHHHHHHHHHHHHHhhCceEEEEEecCHHHHHHHHhcCCEEecc--cchhhhcCcccCCCCeEEEEEEcCCC
Confidence 999999999999999999999987766665655 47899999999976443 44445555655556777775 66654
|
| >d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0244 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.58 E-value=1e-14 Score=133.61 Aligned_cols=125 Identities=19% Similarity=0.253 Sum_probs=97.4
Q ss_pred ccccccCCcCCHHHHHHHHhhhHhhccC----ccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecC---CCeEEEEE
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK---EKCGEVAA 518 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~---~~~~eI~~ 518 (609)
..+||+++++|++.|.++.+........ .+.....+...+ ..+||++.++++||++.+.+... ....++..
T Consensus 4 ~i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 83 (161)
T d2ae6a1 4 SLTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLLS 83 (161)
T ss_dssp CEEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEEE
T ss_pred CeEEEeCCHHHHHHHHHHHHHHhhhcCCcccCChhhHHHHHHhCCCCcEEEEEECCEEEEEEeecccccccccceEEEEE
Confidence 3579999999999999997765433221 222333444444 56889999999999999875332 23478889
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++|+|+|||||+|++||+.+++++++.|++++.+.+ .++.+||+++||+..+..
T Consensus 84 ~~v~~~~rg~Gig~~ll~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~~GF~~~g~~ 141 (161)
T d2ae6a1 84 IGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHF 141 (161)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEeeccccccccccchhheeeccccccchhheehhccccHHHHHHHHHCCCEEEEEE
Confidence 999999999999999999999999999999999987 478999999999998765
|
| >d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase TTHA1209 species: Thermus thermophilus [TaxId: 274]
Probab=99.57 E-value=1.6e-14 Score=134.06 Aligned_cols=127 Identities=18% Similarity=0.189 Sum_probs=97.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccC--------ccCCHHHH----Hhhc------Ce-EEEEEECCEEEEEEEEEEec
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--------VRRTDEEL----LKAL------DS-FYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~--------~~~~~e~l----~~~i------~~-~~V~~~dg~IVG~~~l~~~~ 509 (609)
+.||+++++|++.|.++.++.+...+. ...+.+.. .+.+ .. +++.+.+++++||+.+.+..
T Consensus 1 i~IR~a~~~D~~~i~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 80 (174)
T d2cy2a1 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHhccChHHHHHHHHHHHhcCCCCceEEEEEEcCCEEEeeeeccccc
Confidence 369999999999999998776544332 11222222 1221 23 34445678999999887643
Q ss_pred C----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 510 K----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 510 ~----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
. ...++|..++|+|+|||+|+|++|++.++++|++.|++++.+.+ .++.+||+|+||+..+....+
T Consensus 81 ~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~y~k~GF~~~g~~~~~ 154 (174)
T d2cy2a1 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGEREIE 154 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccCCceEEEEEEEcHHHhhCCCchHHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHCCCEEEeEEEEe
Confidence 2 45689999999999999999999999999999999999999988 378999999999999875543
|
| >d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase SP0256 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.57 E-value=2.1e-15 Score=135.58 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=96.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCc-cCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALV-RRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~-~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
++||+++..|++++.++++.. .+.. ..+.+.+...+ ..++++++|+++||++.+.. .....++|..++|+|+
T Consensus 2 i~Ir~~~~~d~~ei~~l~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~l~V~~~ 77 (137)
T d2atra1 2 ITIKKQEIVKLEDVLHLYQAV---GWTNYTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPS 77 (137)
T ss_dssp EEEEEESCCCHHHHHHHHHTT---CCCC-----CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTT
T ss_pred EEEEeCChhhHHHHHHHHHHc---CCCCCCCCHHHHHHHHhCCcEEEEEEECCEEEEEEEEEc-cCCceEEEEEEEEEHH
Confidence 579999999999999997653 2221 22333444433 45788899999999998873 4567889999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeeec
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~~ 573 (609)
|||+|+|++||+.+++.|++.++..+.+.+ ..+.+||+|+||+..+...
T Consensus 78 ~rg~GiG~~Ll~~~~~~~~~~~~~~i~l~~~~~a~~fY~k~GF~~~~~~~ 127 (137)
T d2atra1 78 YQRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILSTYD 127 (137)
T ss_dssp SCSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGGGT
T ss_pred HcCchHHHHHHHHHHHHHHHCCCeEEEEeecHHHHHHHHhCCCEECccCC
Confidence 999999999999999999999998887766 4789999999999876654
|
| >d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable spermine/spermidine acetyltransferase EF1086 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.57 E-value=4.4e-15 Score=134.52 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=96.7
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh----cCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~----i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~ 522 (609)
|.+.||+++++|++.|..+........+... ..+.+... -..++++..|+++||++.+.+. .+..++|..++|+
T Consensus 1 M~i~ir~~t~~d~~~i~~l~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~i~~~~~~vG~~~~~~~-~~~~~~i~~~~v~ 78 (146)
T d2fl4a1 1 MEIHFEKVTSDNRKAVENLQVFAEQQAFIES-MAENLKESDQFPEWESAGIYDGNQLIGYAMYGRW-QDGRVWLDRFLID 78 (146)
T ss_dssp CCCCCCCCCTTTHHHHHTCCCTTCHHHHHHH-HHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHccccchhhhhh-HHHHHHHHhhCCCeEEEEEEECCEEEEEEEEEEc-CCCeEEEeeEEEc
Confidence 5678999999999999998544333333211 11112111 1357888899999999999854 4677899999999
Q ss_pred ccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeeec
Q 007275 523 PECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIEM 573 (609)
Q Consensus 523 p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~ 573 (609)
|+|||+|+|++||+.+++++. ..+++++.+.+ .++.+||+|+||+.++..+
T Consensus 79 ~~~rgkGiG~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~~ 134 (146)
T d2fl4a1 79 QRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGELD 134 (146)
T ss_dssp GGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEEC
T ss_pred HHHcCCChhhhhhhhhccccccccCceEEEeecccccHHHHHHHHHCCCEEeeEEe
Confidence 999999999999999988775 46999999988 3799999999999998653
|
| >d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2290 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.55 E-value=3.2e-14 Score=130.31 Aligned_cols=143 Identities=15% Similarity=0.259 Sum_probs=107.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhcc----CccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEecCC---CeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~~~~---~~~ 514 (609)
++|||++.+|++.+.+++++...... ....+.+....++ ..+++++.++++||++.+.+.... ..+
T Consensus 3 i~iR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 82 (164)
T d2ge3a1 3 VTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHCG 82 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTEE
T ss_pred EEEEECCHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHhhcCCceEEEEEECCEEEEEEEeeccccCCcCcEE
Confidence 57999999999999999887654322 2233444443333 467888999999999999865433 234
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCcee
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 590 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i 590 (609)
++ .++|+|+|||+|+|++|++.++++|+++|++++.+.+ ..+.+||+++||+..+...-- ..++....+.+
T Consensus 83 ~~-~~~v~~~~rg~Gig~~l~~~~~~~a~~~~~~~i~~~v~~~N~~s~~~y~k~GF~~~g~~~~~----~~~~g~~~D~~ 157 (164)
T d2ge3a1 83 TL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDA----VSIDGHYIDSL 157 (164)
T ss_dssp EE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEE----EESSSCEEEEE
T ss_pred EE-EEEeChhhccccccccchhhhhheeccccccccccccCcchHHHHHHHHHCCCEEEEEEecE----EEECCEEEEEE
Confidence 55 6899999999999999999999999999999999988 478999999999988765210 11222234667
Q ss_pred EEeecC
Q 007275 591 YMKKLL 596 (609)
Q Consensus 591 ~mkkll 596 (609)
+|..|+
T Consensus 158 ~~~~l~ 163 (164)
T d2ge3a1 158 NMAIIF 163 (164)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 777765
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.55 E-value=2.8e-14 Score=131.11 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=102.0
Q ss_pred ccccccCCcCCHHHHHHHHhhhHh-hccCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEe--------------
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF-------------- 508 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~-------------- 508 (609)
..+||+++++|++.|.++.+..+. .....+++.+.+...+ ..+++++.+++++|++.....
T Consensus 5 ~~~iR~~t~~D~~~l~~l~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~ 84 (166)
T d1cjwa_ 5 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 84 (166)
T ss_dssp SSEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred hHHhccCCHHHHHHHHHHHHHhCCcccccCcccHHHHhhhhhcCCceEEEEEECCceeeeecccccccccchhhhhhccc
Confidence 357999999999999999877433 2233556777665554 468999999999999876532
Q ss_pred cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEe-HHHHHHHHHCCCeEeeeecc
Q 007275 509 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEMI 574 (609)
Q Consensus 509 ~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~t-~~a~~fYek~GF~~~~~~~l 574 (609)
...+.++|..++|+|+|||+|+|+.||+.+++++++. +++.+.+.+ ..+++||+|+||+.++...+
T Consensus 85 ~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~~i~l~~~~~ai~fY~k~GF~~~G~~~~ 152 (166)
T d1cjwa_ 85 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAI 152 (166)
T ss_dssp TTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEECSC
T ss_pred CCCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhCCCceEEEecCHHHHHHHHHCCCEEEcceee
Confidence 1235789999999999999999999999999988775 688888887 57899999999999997643
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Probab=99.52 E-value=5.3e-14 Score=129.15 Aligned_cols=116 Identities=21% Similarity=0.301 Sum_probs=92.0
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
|...++.+.++++|.-..+..+ .+.+.+...+ ..+|+++++|++||++.+.+ ..++.++|..++|+|+
T Consensus 1 m~~~ie~i~~~~~P~~ll~~aD---------p~~~~i~~yl~~~~~~v~~~~g~ivG~~~~~~-~~~~~~~i~~l~V~p~ 70 (152)
T d1y9ka1 1 MSVVIERIPKEAIPKSLLLLAD---------PSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEH 70 (152)
T ss_dssp CCCEEEEECGGGCCHHHHHHHC---------CCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGG
T ss_pred CceEEEecChhhCChhHHhccC---------CCHHHHHHHhcCCeEEEEEECCEEEEEEEEEE-cCCCEEEEEEEEEcHH
Confidence 3456777888887754333221 1233333332 56889999999999998874 4577899999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|||+|+|++||+.++++|++.|++.+.+.| .++.+||+++||+.++..
T Consensus 71 ~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~t~~~n~~a~~fY~k~GF~~~~~~ 122 (152)
T d1y9ka1 71 LQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 122 (152)
T ss_dssp GCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred HCCCCcchHHHHHHHHHHHHcCCceEEEEeccCCHHHHHHHHHCCCEEEeEE
Confidence 999999999999999999999999999987 378999999999998865
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.51 E-value=4.8e-14 Score=127.05 Aligned_cols=96 Identities=19% Similarity=0.155 Sum_probs=79.7
Q ss_pred EEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe--HHHHHHHHHCCCe
Q 007275 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFR 567 (609)
Q Consensus 490 ~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t--~~a~~fYek~GF~ 567 (609)
+++.+.||++||++..... ....+|..++|+|+|||||+|++||+.++++|++.|+.++++.+ ..+.+||+|+||+
T Consensus 39 ~~v~d~~g~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~fY~k~GF~ 116 (137)
T d2g3aa1 39 ITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFT 116 (137)
T ss_dssp EEEECTTCCEEEEEEEEEE--TTEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCE
T ss_pred EEEEeCCCCEEEEEEEEEe--CCeEEEEEEEEChhhcCCChHHHHHHHHHHHHHHcCCceEEEecccHhhHHHHHhCCCE
Confidence 5566678999999887743 46789999999999999999999999999999999999999987 4789999999999
Q ss_pred EeeeecchhHhhhhcccCCCceeEEeec
Q 007275 568 ECSIEMIPEERRKRINLSRNSKYYMKKL 595 (609)
Q Consensus 568 ~~~~~~lp~~~~~~y~~~~~s~i~mkkl 595 (609)
.++.... |. ...+.++|+|-
T Consensus 117 ~~g~~~~-------~~-~~~~~~~m~K~ 136 (137)
T d2g3aa1 117 KIGSLGP-------LS-SGQSITWLEKR 136 (137)
T ss_dssp EEEEECC-------CT-TSCCEEEEEEE
T ss_pred EEEEECC-------CC-CCCcEEEEEEE
Confidence 9986531 22 33556777664
|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YitI species: Bacillus licheniformis [TaxId: 1402]
Probab=99.51 E-value=1.3e-13 Score=125.50 Aligned_cols=84 Identities=20% Similarity=0.224 Sum_probs=74.2
Q ss_pred eEEEEEECCEEEEEEEEEEec-----CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHH
Q 007275 489 SFYVVEREGQIIACAALFPFF-----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFK 562 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~-----~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYe 562 (609)
..+++.+|+++||++.+...+ ....++|..++|+|+|||+|+|++||++++++|++.|++.+++.+ ..+.+||+
T Consensus 39 ~h~~a~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~A~~fY~ 118 (145)
T d2jdca1 39 FHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYK 118 (145)
T ss_dssp EEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHH
T ss_pred EEEEEEeCCEEEEEEEEEeccccccCCCCeEEEEEEEEeHHHhhhhHHHHHHHHHHHHHHHcCCCEEEEeccchHHHHHH
Confidence 347888999999999887532 245678999999999999999999999999999999999999987 57999999
Q ss_pred HCCCeEeeee
Q 007275 563 SRGFRECSIE 572 (609)
Q Consensus 563 k~GF~~~~~~ 572 (609)
|+||+.++..
T Consensus 119 k~GF~~~g~~ 128 (145)
T d2jdca1 119 KLGFSEQGEV 128 (145)
T ss_dssp HTTCEEEEEE
T ss_pred HCCCEEeCcE
Confidence 9999999864
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.2e-13 Score=126.38 Aligned_cols=104 Identities=14% Similarity=0.236 Sum_probs=88.4
Q ss_pred CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCC
Q 007275 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 566 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF 566 (609)
+.++++.+++++||++++.+.++...++|..++|+|+|||||+|++||+.+++++++.|++.+++.+ +.|.+||+|+||
T Consensus 52 ~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~k~GF 131 (162)
T d1z4ra1 52 HKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGF 131 (162)
T ss_dssp CEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTE
T ss_pred ceEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEChhhhhhhHHHHHHHHHHHHHHHCCCcEEEEecCcchHHHHHhCCC
Confidence 5678888999999999999888888999999999999999999999999999999999999999987 579999999999
Q ss_pred eEeeeecchhHhhhhcccCCCceeEEe
Q 007275 567 RECSIEMIPEERRKRINLSRNSKYYMK 593 (609)
Q Consensus 567 ~~~~~~~lp~~~~~~y~~~~~s~i~mk 593 (609)
+.. ..+|...+..|-.+-+..++|.
T Consensus 132 ~~~--~~~~~~~~~~~ikdy~~~~lm~ 156 (162)
T d1z4ra1 132 SKD--IKVPKSRYLGYIKDYEGATLME 156 (162)
T ss_dssp ESC--CCSCHHHHTTTSCCCTTCEEEE
T ss_pred eEe--ccCchhHhcCCccCCCCeEEEE
Confidence 764 3356666666544445666663
|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2161 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.50 E-value=1.1e-13 Score=123.93 Aligned_cols=109 Identities=13% Similarity=0.126 Sum_probs=85.8
Q ss_pred CHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHH
Q 007275 458 DLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534 (609)
Q Consensus 458 D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~L 534 (609)
|.+++.++... ....+++.+.....+ ..++++.+++++|||+.+. .+....++|..++|+|+|||||+|++|
T Consensus 10 ~~e~~~~Lr~~----~g~~~~s~e~~~~~l~~s~~~~~~~~~~~~vG~~~~~-~~~~~~~~i~~l~V~p~~rg~GiG~~L 84 (133)
T d1y7ra1 10 TCEDYCALRIN----AGMSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVI-GDGGTVFQIVDIAVLKSYQGQAYGSLI 84 (133)
T ss_dssp CHHHHHHHHHH----TTCCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEE-ECSSSEEEEEEEEECGGGCSSSHHHHH
T ss_pred CHHHHHHHHHH----cCcCCCCHHHHHHHhcCCeEEEEEEECCEEEEEEEEE-eccCCEEEEEEEEEeecccchHHHHHH
Confidence 45555555322 223456777777665 3466778899999999887 345678999999999999999999999
Q ss_pred HHHHHHHHHHCCCCEEEEEe---HHHHHHHHHCCCeEeee
Q 007275 535 LDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSI 571 (609)
Q Consensus 535 L~~l~~~A~~~G~~~I~l~t---~~a~~fYek~GF~~~~~ 571 (609)
|++++++++++|++++++.+ +++.+||+|+||++.+.
T Consensus 85 l~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k~GF~~~~~ 124 (133)
T d1y7ra1 85 MEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEP 124 (133)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTT
T ss_pred HHHHHHHHHHcCCCEEEEEEcCChHHHHHHHHCCCEEeCC
Confidence 99999999999998776654 47899999999998643
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Probab=99.50 E-value=4.4e-14 Score=127.12 Aligned_cols=123 Identities=13% Similarity=0.176 Sum_probs=93.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccC--ccCC--------HHHHHhhc-------C--eEEEEEECCEEEEEEEEEEec
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRRT--------DEELLKAL-------D--SFYVVEREGQIIACAALFPFF 509 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~--~~~~--------~e~l~~~i-------~--~~~V~~~dg~IVG~~~l~~~~ 509 (609)
+.|||++++|++.+.++..+.....+. ..+. .+.+..++ . .+++...+++++|++.+....
T Consensus 2 i~lRp~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~ 81 (155)
T d1ufha_ 2 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 81 (155)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEEEEEEcCCeEEEEEEEEeec
Confidence 469999999999999987553221110 1111 22333332 1 233445679999999887543
Q ss_pred C--CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 510 K--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 510 ~--~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
. .+.++|..++|+|+|||+|+|+.||+.+++++++.|++++.+.| .++.+||+|+||++++.
T Consensus 82 ~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 149 (155)
T d1ufha_ 82 EHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDV 149 (155)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCC
T ss_pred cCCCCceEEEEEEEEHHHcCCcccchHHHHHHHHhhhcCCceeEEEEcCCCHHHHHHHHHCCCEEEeE
Confidence 2 46789999999999999999999999999999999999999988 37899999999998864
|
| >d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.7e-14 Score=131.25 Aligned_cols=123 Identities=21% Similarity=0.241 Sum_probs=94.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc---cCccCCHHHHHhhc------CeE--------EEEEECCEEEEEEEEEEecC-
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL------DSF--------YVVEREGQIIACAALFPFFK- 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~---~~~~~~~e~l~~~i------~~~--------~V~~~dg~IVG~~~l~~~~~- 510 (609)
++||+++++|.+.|.++++...... .....+.+.+.... ... ++...++.++|++.+.+..+
T Consensus 2 f~IR~at~~D~~~i~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (167)
T d2b5ga1 2 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 81 (167)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhccccchhhhhhhhccCceeEEeeCCeEEEEEEEEeeccc
Confidence 4799999999999999987753321 12334556555432 111 23345688999998875433
Q ss_pred --CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 511 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 511 --~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
....+|..++|+|+|||+|+|++||+.++++|+++|++.|.+.| .++++||+|+||+..+.
T Consensus 82 ~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~~~~ 148 (167)
T d2b5ga1 82 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 148 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred ccccceecceeeeeeccccCCCchhhhhhhhhhhcccCcceeeeecccCcHHHHHHHHHCCCEECcE
Confidence 24467889999999999999999999999999999999999988 38999999999998754
|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HPA2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.49 E-value=6.8e-14 Score=126.43 Aligned_cols=120 Identities=18% Similarity=0.240 Sum_probs=91.2
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHH---Hhhc--------CeEEEEEECCEEEEEEEEEEecC----CCe
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---LKAL--------DSFYVVEREGQIIACAALFPFFK----EKC 513 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l---~~~i--------~~~~V~~~dg~IVG~~~l~~~~~----~~~ 513 (609)
++||+++++|.+.+.+|++..... +....+.+.. ..++ ..+++.+.++.+||++.+.+.+. ...
T Consensus 3 i~IR~~~~~D~e~~~~L~~~y~~f-y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~~~~~ 81 (150)
T d1qsma_ 3 ITVRFVTENDKEGWQRLWKSYQDF-YEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDK 81 (150)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSCE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHH-hcccCchHHHHHHHHHHhCCCcccceeeeehhhcCcEEEEEEEeeccccccccch
Confidence 579999999999999997653321 1222333322 1221 12333445689999998876443 356
Q ss_pred EEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEe
Q 007275 514 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 569 (609)
Q Consensus 514 ~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~ 569 (609)
++|..++|+|++||+|+|++||+.++++|+++|+++|.+.| ++|++||+|+||+..
T Consensus 82 ~~l~~l~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GFk~~ 141 (150)
T d1qsma_ 82 IYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAP 141 (150)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECS
T ss_pred heehhhhhhhcccCccHHHHHHHHHHhhhcccccccceeEEccCCHHHHHHHHHcCCCCc
Confidence 78999999999999999999999999999999999999998 389999999999853
|
| >d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YjcF species: Bacillus subtilis [TaxId: 1423]
Probab=99.48 E-value=8.5e-14 Score=126.02 Aligned_cols=116 Identities=20% Similarity=0.240 Sum_probs=89.4
Q ss_pred CCcCCHHHHHHHHhhhHhh--ccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHH
Q 007275 454 AKVTDLSGIKQIIQPLVES--GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 531 (609)
Q Consensus 454 a~~~D~~~I~~L~~~~~~~--~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG 531 (609)
-+.+++.++.++....... +++.....+.+ +.....|++..++++||++.+.+ .++.++|..++|+|+|||+|+|
T Consensus 7 ~~~~el~~~~~iR~~VF~~Eq~ip~~~e~D~~-D~~~~h~v~~~~~~~vg~~~~~~--~~~~~~i~~l~V~~~~rg~GiG 83 (140)
T d1q2ya_ 7 KNEEQLKDAFYVREEVFVKEQNVPAEEEIDEL-ENESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHRSAGVG 83 (140)
T ss_dssp CSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTT-GGGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGTTTTHH
T ss_pred CCHHHHHHHHHHHHHHeeeccCCChhhhcCCC-CcccEEEEEeccccEEEEEeeec--ccceeeEeeeEEchhhcCCcHH
Confidence 3556677777776654333 22221111111 12245688899999999999974 4578999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 532 DKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 532 ~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
++||+.++++|++.|++.+++.+ ..+.+||+|+||+.++..
T Consensus 84 ~~Ll~~~~~~a~~~g~~~i~l~a~~~a~~fY~k~GF~~~~~~ 125 (140)
T d1q2ya_ 84 GIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSEK 125 (140)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCSC
T ss_pred HHHHHHHHHHHHHcCCCceEEeCCHHHHHHHHHCcCEEcCCe
Confidence 99999999999999999999988 578999999999998743
|
| >d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase PA4026 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.48 E-value=4.5e-14 Score=128.21 Aligned_cols=120 Identities=21% Similarity=0.196 Sum_probs=92.5
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--------C--eEEEEEECCEEEEEEEEEEecC----CCeEE
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------D--SFYVVEREGQIIACAALFPFFK----EKCGE 515 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--------~--~~~V~~~dg~IVG~~~l~~~~~----~~~~e 515 (609)
.||.++.+|++.|..+++..... +..+...+....++ . .+++.+.++++||++.+.+... ...++
T Consensus 2 ~Ir~a~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~ 80 (153)
T d2euia1 2 RIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWI 80 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHhCCCCcEEEEEEecCCeEEEEEeeecccccccccceEE
Confidence 58999999999999998764332 22222333222221 2 2344457899999998875332 35578
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEee
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 570 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~ 570 (609)
|..++|+|++||+|+|++||++++++|++.|++.+.+.| .++.+||+++||+..+
T Consensus 81 i~~~~V~~~~r~~Gig~~Ll~~~~~~ak~~g~~~i~l~~~~~N~~a~~~Y~k~GF~~~~ 139 (153)
T d2euia1 81 LNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQ 139 (153)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCC
T ss_pred ecceeeeecccCcchhhHHHHHHhhhHHHhhhccceEEecCCCHHHHHHHHHCCCEEcc
Confidence 999999999999999999999999999999999999998 4899999999998754
|
| >d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YvbK (BSu33890) species: Bacillus subtilis [TaxId: 1423]
Probab=99.46 E-value=6.2e-13 Score=121.90 Aligned_cols=84 Identities=21% Similarity=0.294 Sum_probs=77.4
Q ss_pred CeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHH
Q 007275 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKS 563 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek 563 (609)
..+|+++.+|++||++.+.+. ++..+++..++|+|+|||||+|++||+.++++|++.|++.+++.| ..|++||++
T Consensus 35 ~~~~v~~~~g~ivG~~~~~~~-~~~~~~l~~i~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~~~l~~~~~n~~a~~fYek 113 (152)
T d1yvka1 35 GECYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQK 113 (152)
T ss_dssp SEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred CeEEEEEECCEEEEEEEEEec-CCCEEEEEEeeeCHhHcCCCcccHHHHHHHHHhhhhcccccceeeccCCHHHHHHHHH
Confidence 578999999999999999854 567899999999999999999999999999999999999999988 378999999
Q ss_pred CCCeEeeee
Q 007275 564 RGFRECSIE 572 (609)
Q Consensus 564 ~GF~~~~~~ 572 (609)
+||+.++..
T Consensus 114 ~GF~~~~~~ 122 (152)
T d1yvka1 114 CGFRIQAID 122 (152)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999999876
|
| >d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=2.8e-13 Score=123.62 Aligned_cols=123 Identities=23% Similarity=0.256 Sum_probs=92.4
Q ss_pred cccccCCcCCHHHHHHHHhhhHh---hccCccCCHHHHHhhc------CeE--------EEEEECCEEEEEEEEEEecC-
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSF--------YVVEREGQIIACAALFPFFK- 510 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~---~~~~~~~~~e~l~~~i------~~~--------~V~~~dg~IVG~~~l~~~~~- 510 (609)
+.||+++++|++.|.+++++... ......++.+.+...+ ... .+...++.++|++.+.+...
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (167)
T d2beia1 2 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 81 (167)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHhhccccchhhhhhhhcccccceeecceeeeEEEeeccccc
Confidence 57999999999999999876432 2233456666665443 111 12234678889887764332
Q ss_pred --CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeee
Q 007275 511 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 571 (609)
Q Consensus 511 --~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~ 571 (609)
....++..++|+|+|||+|+|++||++++++|++.|+++|.+.| .++++||+|+||+.++.
T Consensus 82 ~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 148 (167)
T d2beia1 82 WKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTE 148 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHHH
T ss_pred ccccceeccceecCHhhcCCCcchhhHHHHHHHHhhhcccccceeeccCCHHHHHHHHHCCCEEccE
Confidence 35678899999999999999999999999999999999999988 38999999999998753
|
| >d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH1933 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.45 E-value=2.1e-13 Score=123.39 Aligned_cols=84 Identities=18% Similarity=0.237 Sum_probs=70.6
Q ss_pred CeEEEEEECCEEEEEEEEEEecC-----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHH
Q 007275 488 DSFYVVEREGQIIACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTA 558 (609)
Q Consensus 488 ~~~~V~~~dg~IVG~~~l~~~~~-----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~ 558 (609)
..++|+..|++++|++.+.+... ...++|..++|+|+|||+|+|++||+.++++|++.+.+. .+.+ .++.
T Consensus 55 ~~~~v~~~~~~~vg~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~~~~-~~~v~~~N~~a~ 133 (157)
T d1wwza1 55 DGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTI-ELWVGEKNYGAM 133 (157)
T ss_dssp GGEEEEEETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTCSEE-EEEEETTCHHHH
T ss_pred CeEEEEEECCEEEEEEEeeccccccccCCcEEEEEEEEEEehhccchhHHHHHHHHHHHHHHhCCce-EEEEcCCCHHHH
Confidence 56889999999999998864311 245789999999999999999999999999999988654 4444 3789
Q ss_pred HHHHHCCCeEeeee
Q 007275 559 DWFKSRGFRECSIE 572 (609)
Q Consensus 559 ~fYek~GF~~~~~~ 572 (609)
+||+|+||+.++..
T Consensus 134 ~~Y~k~GF~~~g~~ 147 (157)
T d1wwza1 134 NLYEKFGFKKVGKS 147 (157)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHHCCCEEEeEE
Confidence 99999999999865
|
| >d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.44 E-value=4.5e-12 Score=128.88 Aligned_cols=199 Identities=18% Similarity=0.200 Sum_probs=126.0
Q ss_pred eEEEEeCCcccCCCC-hHHHHHHHHHHHhCCCeEEEEECChHHHhHHHHHcCCc-------ccc---cCCc---------
Q 007275 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE-------AKY---LGRY--------- 160 (609)
Q Consensus 101 ~iVIKlGGsvl~~~~-l~~l~~~Ia~L~~~G~~vVLVhGgG~~i~~~l~~~g~~-------~~~---~~g~--------- 160 (609)
+.|.|+||+.+.+.+ ++++++-|..-.+.+.++|+|.++-.-+...|.+.... ... ...+
T Consensus 1 ~tV~KFGGTSvadae~i~~V~~II~~~~~~~~~~vVVVSA~ggvTn~L~~~~~~a~~~~~~~~~~~~l~~i~~~h~~~i~ 80 (302)
T d2hmfa1 1 TTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVRDIAKVGDFIKFIREKHYKAIE 80 (302)
T ss_dssp CEEEEECTGGGSSHHHHHHHHHHHHHHHHHCSCEEEEECCCTTHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEeCCCCChhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 479999999998854 77777777665566778888888754444433322100 000 0000
Q ss_pred -cCCC--------------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCChhhhHhcCCCCcceeE
Q 007275 161 -RITD--------------------------------SESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207 (609)
Q Consensus 161 -rvt~--------------------------------~~~l~~~~~~~g~i~~~l~~~Ls~~~~~~~l~~~G~~~~~~av 207 (609)
-+++ +...+.+......+...|.+. .|+..|++ +.
T Consensus 81 ~l~~~~~~~~~~~~~i~~~l~~L~~~l~~~~~~~e~~~~~~D~ils~GE~lSa~lla~--------~L~~~Gi~----a~ 148 (302)
T d2hmfa1 81 EAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSG--------AIRDLGEK----SI 148 (302)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHTHHHHHHHHHHHH--------HHHHTTCC----EE
T ss_pred HHhccHhHHHHHHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHhhhhhhHHhHHHHH--------HHHHcCCc----eE
Confidence 0001 111122222222333444443 47888887 55
Q ss_pred EEeecCCceeeeeecCcccCcCCcceeeEeeeC-HHHHHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHH
Q 007275 208 GVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALA 282 (609)
Q Consensus 208 ~l~~~d~~~l~ak~~~~~~~~d~g~~G~v~~v~-~~~I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~ 282 (609)
.+...+-.+.+.. .++.. .+.... .+.+..+++.+.|||+.+. +.+..|++..+ .+|..|+.+|.+
T Consensus 149 ~ld~~~~~i~t~~--------~~~~a-~~~~~~~~~~l~~~~~~~~v~Vv~GFig~~~~G~~ttLgRgGSD~tA~~la~~ 219 (302)
T d2hmfa1 149 ALEGGEAGIITDN--------NFGSA-RVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYG 219 (302)
T ss_dssp EECTTTTTEEECS--------CTTSC-CEEEECHHHHHHHHHHTTCEEEEESSEEECTTCCEEECCTTTHHHHHHHHHHH
T ss_pred EeeccccccccCC--------ccchh-hhhhhhhHHHHHHHHhcCCeEEeecccccCCCCCEEEEeccCcccHHHHHHHH
Confidence 5544443333221 22211 122222 4568888999999999985 67788988765 589999999999
Q ss_pred cCCCEEEEEecccccC-------CCCccccccCHHHHHHHHHhhc
Q 007275 283 IEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (609)
Q Consensus 283 L~Ad~LIiLTDvdgv~-------~~~~lI~~it~~e~~~l~~~~~ 320 (609)
|+|+.+.+.|||+|++ +++++|+.++.+|+.+|...|+
T Consensus 220 l~A~~~~i~tdv~gi~~~dP~~~~~a~~~~~~~y~ea~eLa~~g~ 264 (302)
T d2hmfa1 220 LDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGA 264 (302)
T ss_dssp HTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTC
T ss_pred hccHHHHHHhccchhccchhhcCCCceEecccCHHHHHHHHhCCC
Confidence 9999999999999982 5689999999999999976543
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.43 E-value=4.3e-13 Score=121.73 Aligned_cols=82 Identities=22% Similarity=0.392 Sum_probs=69.5
Q ss_pred eEEEE-EECCEEEEEEEEEEecC----CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe---HHHHHH
Q 007275 489 SFYVV-EREGQIIACAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADW 560 (609)
Q Consensus 489 ~~~V~-~~dg~IVG~~~l~~~~~----~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t---~~a~~f 560 (609)
.++++ +.++++|||+.+.+..+ ...++|..++|+|+|||||+|++||++++++|++.|++++.|.| ++|.+|
T Consensus 53 ~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~~~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~n~A~~~ 132 (149)
T d1vkca_ 53 KFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKW 132 (149)
T ss_dssp EEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHH
T ss_pred eEEEEEecCCeEEEEEEEEeccCCCCCCcEEEEEEEEECHHHcCCChHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
Confidence 34555 45789999998865322 35688999999999999999999999999999999999999987 368999
Q ss_pred HHHCCCeEee
Q 007275 561 FKSRGFRECS 570 (609)
Q Consensus 561 Yek~GF~~~~ 570 (609)
|+|+||+..+
T Consensus 133 Y~k~GF~~~~ 142 (149)
T d1vkca_ 133 YEERGYKARA 142 (149)
T ss_dssp HHHTTCCCCC
T ss_pred HHHCCCEEEE
Confidence 9999998754
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.39 E-value=2e-12 Score=121.32 Aligned_cols=110 Identities=28% Similarity=0.524 Sum_probs=87.0
Q ss_pred cCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhcCeEEEEEECCEEEEEEEEEEec--------------CCCeEEEEE
Q 007275 453 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF--------------KEKCGEVAA 518 (609)
Q Consensus 453 ~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~--------------~~~~~eI~~ 518 (609)
...+.|.+.+..++.+... ..+......+||++.|++|||++++.+.. ..+.++|..
T Consensus 41 ~~~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~va~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~~ 111 (182)
T d2gana1 41 KPNPNDFNGFREVYEPFLK---------FRLSQEFDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEF 111 (182)
T ss_dssp CCCTTCHHHHHHHHHHHHH---------HHHHTTCSEEEEEEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHH---------HHhcCCcceEEEEEECCEEEEEEEEeccCcccccccccccccCCCCEEEEEE
Confidence 3466778877777555332 23344456789999999999999987421 235689999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
++|+|+|||+|+|++||+.++++|++.|++ +++.| ..+.+||+|+||+.+...
T Consensus 112 l~V~p~~rg~GiG~~Ll~~~~~~ak~~G~~-~~l~~~~~n~~a~~fY~k~GF~~~~~y 168 (182)
T d2gana1 112 FVVDPEFQGKGIGSTLLEFAVKRLRSLGKD-PYVVTFPNLEAYSYYYMKKGFREIMRY 168 (182)
T ss_dssp EEECTTSTTSSHHHHHHHHHHHHHHHTTCE-EEEEECGGGSHHHHHHHTTTEEEEECC
T ss_pred EEECHhhcCCCHHHHHHHHHHHHHHHcCCe-EEEEEccCCHHHHHHHHHCCCEEeeEE
Confidence 999999999999999999999999999987 55666 378999999999987543
|
| >d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA0115 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.37 E-value=6.2e-13 Score=121.55 Aligned_cols=122 Identities=18% Similarity=0.210 Sum_probs=88.6
Q ss_pred cccCCcCCHHHHHHHHhhhHhhccCccCC-HHHHHhh-cCeEEEEEECCEEEEEEEEEEec-CCCeEEEEEEEEcccCcC
Q 007275 451 TRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLKA-LDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 527 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~-~e~l~~~-i~~~~V~~~dg~IVG~~~l~~~~-~~~~~eI~~iaV~p~~Rg 527 (609)
+..++.+|+.+|.+|..+........+.. .+....+ -...+++..|+++|||+.+.+.. ..+...|.+++|+|+|||
T Consensus 9 f~el~~~el~~i~~lR~~VFv~EQ~~~~~e~D~~D~~~~s~hl~~~~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~Rg 88 (149)
T d1xeba_ 9 HADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARG 88 (149)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTT
T ss_pred hHHCCHHHHHHHHHHHHHheEecCCCCCCCCcCCcccCceEEEEEEeCCeEEEEEEEeeccccCCcEEEEEEEEehhhhc
Confidence 45567777888888776643222111111 1111111 13356778899999999998533 346789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCC-CEEEEEe-HHHHHHHHHCCCeEeeee
Q 007275 528 QGQGDKLLDYIEKKAASLGL-DMLFLLT-TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~-~~I~l~t-~~a~~fYek~GF~~~~~~ 572 (609)
+|+|++||+.++++|++.+. ..|++.+ ..+.+||+++||+.++..
T Consensus 89 ~GiG~~L~~~~l~~~~~~~~~~~i~l~A~~~a~~FY~k~GF~~~g~~ 135 (149)
T d1xeba_ 89 QGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEV 135 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCC
T ss_pred cChhHHHHHHHHHHHHHhCCCCEEEEeChHHHHHHHHHCCCEECCCc
Confidence 99999999999999988754 4688877 478999999999998754
|
| >d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 3-N-acetyltransferase species: Serratia marcescens [TaxId: 615]
Probab=99.35 E-value=9.7e-13 Score=116.65 Aligned_cols=117 Identities=13% Similarity=0.151 Sum_probs=86.7
Q ss_pred cccccCCcCCHHHHHHHHhhhHhh-----c-cCccCCHHHHHhhc----CeEEEEEECCEEEEEEEEEEec----CCCeE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVES-----G-ALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCG 514 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~-----~-~~~~~~~e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~----~~~~~ 514 (609)
+.++.+.++|++++..++..+... . ...+.+.+.+...+ ..+++++.++++||++.+.+.. ....+
T Consensus 3 i~~~r~~P~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 82 (137)
T d1bo4a_ 3 IRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEI 82 (137)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred EEEEeCCHhhHHHHHHHHHHHHHHhcchhhhccCCCcHHHHHHhhcCCCeEEEEEEECCeeeeecccccccCccCCCCEE
Confidence 346667888988887775432211 1 11233344444433 3457778899999999876532 24567
Q ss_pred EEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCC
Q 007275 515 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 565 (609)
Q Consensus 515 eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~G 565 (609)
+|..++|+|+|||+|+|++||++++++|++.|++.|++.| .++.+||+|+|
T Consensus 83 ~i~~l~V~p~~Rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~~G 137 (137)
T d1bo4a_ 83 YIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLG 137 (137)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred EEEEEEEcHHHhhhchhhHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999998 26899999987
|
| >d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.35 E-value=2.2e-11 Score=123.80 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=66.4
Q ss_pred HHHHHHHhCCCeEEEcCC-ccC-CCCcEEEe---cHHHHHHHHHHHcCCCEEEEEeccccc---C----CCCccccccCH
Q 007275 242 TRMRERLDGGCLVILSNL-GYS-SSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTL 309 (609)
Q Consensus 242 ~~I~~LL~~G~IPVi~~~-~~~-~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~----~~~~lI~~it~ 309 (609)
..+..+++.+.|||+.+. +.+ .+|++..+ -+|..|+.+|.+|+|+.+.+.|||||+ | +++++|++++.
T Consensus 174 ~~~~~~~~~~~v~vv~Gfig~~~~~G~~ttLGRgGSD~TAa~la~~l~A~~~~iwtDV~Gi~taDPr~v~~a~~i~~lsy 253 (304)
T d2cdqa1 174 RLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTF 253 (304)
T ss_dssp HHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEH
T ss_pred HHhhhhhccCcEEEeeccccccCcCCceeeeccCccccHHHHHHHHhCchHHHHhcCcchheeccccccCCceEcCccCH
Confidence 345667899999999985 554 57888765 489999999999999999999999998 3 46899999999
Q ss_pred HHHHHHHHhhc
Q 007275 310 QEADSLIRQRV 320 (609)
Q Consensus 310 ~e~~~l~~~~~ 320 (609)
+|+.+|..-|+
T Consensus 254 ~EA~ela~~Ga 264 (304)
T d2cdqa1 254 DEAAELAYFGA 264 (304)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHhCCC
Confidence 99999976544
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.33 E-value=4.7e-12 Score=110.10 Aligned_cols=102 Identities=25% Similarity=0.246 Sum_probs=75.9
Q ss_pred cccCCcCCHHHHHHHHh---hhHhh-ccCccCCH-------HHHHhhc----CeEEEEEECCEEEEEEEEEEecCCCeEE
Q 007275 451 TRTAKVTDLSGIKQIIQ---PLVES-GALVRRTD-------EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE 515 (609)
Q Consensus 451 IR~a~~~D~~~I~~L~~---~~~~~-~~~~~~~~-------e~l~~~i----~~~~V~~~dg~IVG~~~l~~~~~~~~~e 515 (609)
||+++.+|.+.|.++.. ..... ......+. +.+...+ ..+||++.||++|||+.+.+......++
T Consensus 1 IR~~~kdd~~~I~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~ 80 (118)
T d2aj6a1 1 MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVN 80 (118)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEE
T ss_pred CCcCChhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHhhcCCCcEEEEEEECCEEEEEeeeccccCCCeEE
Confidence 68999999887766643 22221 11111111 1111111 4589999999999999988666677899
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 552 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l 552 (609)
|..++|+|+|||+|+|++||++++++|++.|+++|.+
T Consensus 81 i~~l~V~~~~RgkGiG~~Ll~~~~~~a~~~g~~~i~~ 117 (118)
T d2aj6a1 81 IELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISN 117 (118)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCC
T ss_pred EEEEEEchhhccCHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 9999999999999999999999999999999988743
|
| >d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Escherichia coli [TaxId: 562]
Probab=99.26 E-value=1e-10 Score=118.09 Aligned_cols=76 Identities=24% Similarity=0.280 Sum_probs=62.5
Q ss_pred HHHHHhCCCeEEEcCC-ccCCCCcEEEe---cHHHHHHHHHHHcCCCEEEEEeccccc---C----CCCccccccCHHHH
Q 007275 244 MRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEA 312 (609)
Q Consensus 244 I~~LL~~G~IPVi~~~-~~~~~ge~~~i---d~D~lAa~lA~~L~Ad~LIiLTDvdgv---~----~~~~lI~~it~~e~ 312 (609)
+...++.+ |||+.+. +.+..|++..+ .+|..|+.+|.+|+|+.+.+-|||||+ | +++++|++++.+|+
T Consensus 168 ~~~~~~~~-i~Vv~GFig~~~~G~~ttLGRgGSDytAa~~a~~l~A~~v~iwtDV~Gi~taDP~~v~~A~~i~~lsy~EA 246 (292)
T d2j0wa1 168 LLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEA 246 (292)
T ss_dssp THHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHH
T ss_pred hhhhhccc-ccccccccccccCCceEeeccCcccHHHHHHHHHhhcHHHHHhccCcceeechhhcCCCceEcceeCHHHH
Confidence 33344554 8899884 67788988876 489999999999999999999999998 3 46899999999999
Q ss_pred HHHHHhhc
Q 007275 313 DSLIRQRV 320 (609)
Q Consensus 313 ~~l~~~~~ 320 (609)
.+|..-|+
T Consensus 247 ~ela~~Ga 254 (292)
T d2j0wa1 247 AEMATFGA 254 (292)
T ss_dssp HHHHHTTC
T ss_pred HHHHhCCc
Confidence 99976544
|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase Ava4977 species: Anabaena variabilis [TaxId: 1172]
Probab=99.25 E-value=2.4e-11 Score=121.90 Aligned_cols=119 Identities=18% Similarity=0.330 Sum_probs=94.4
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc--CeEEEEEECCEEEEEEEEEEecC---C---CeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK---E---KCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i--~~~~V~~~dg~IVG~~~l~~~~~---~---~~~eI~~ia 520 (609)
+.||+++++|+++|.++++......+. ..+.+.+.+ ..++++.+|+++||++.+.|... + ..+.|..++
T Consensus 2 ~~~~ka~~~d~~~l~~l~~~~F~~~~~---~~~~~~~~~~~~~~~v~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~ 78 (283)
T d2ozga2 2 FKYTKASQENIQQLGNILEQCFVMSFG---DSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVG 78 (283)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTCCTT---HHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCCCcC---cHHHHHHHhcCCCEEEEEECCEEEEEEEEEEeeeeECCeeeeEeeEEEEE
Confidence 468999999999999997665433221 123344433 56899999999999999987431 1 447899999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~ 571 (609)
|+|+|||+|+|++||+.+++.+++.|+....+.+ .+..||+++||+.+..
T Consensus 79 v~p~~rg~G~~~~L~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 128 (283)
T d2ozga2 79 IAPEYRGDGAAIALIQHTLQEISEQDIPISVLYP-ATQRLYRKAGYEQAGS 128 (283)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred ECcccccCChHHHHHHHHHHHHHhcCceEEEccC-CccchHHcCCCeEece
Confidence 9999999999999999999999999998776654 4578999999998754
|
| >d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein Rv1347c/MT1389 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.23 E-value=1.9e-11 Score=116.05 Aligned_cols=135 Identities=13% Similarity=-0.029 Sum_probs=105.0
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhc-cCccCCHHHHHhhc--------CeEEEEEECCEEEEEEEEEEec----------
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF---------- 509 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~i--------~~~~V~~~dg~IVG~~~l~~~~---------- 509 (609)
..||+++.+|++.|.+++++..... +..+++.+...+++ ..+++++.|+.++|++.+....
T Consensus 34 ~~LR~~~~~D~~~l~~w~~dp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 113 (198)
T d1yk3a1 34 YGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDA 113 (198)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCC
T ss_pred eEEEeCCHHHHHHHHHHHcChhhhhccCCCCCHHHHHHHHHHHhcCCccceEEEEECCEEEEEEEEEecccccccccccc
Confidence 4799999999999999998754332 33455555544433 2467888999999999886421
Q ss_pred CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHH--HCCCCEEEEEe----HHHHHHHHHCCCeEeeeecchhHhhhhcc
Q 007275 510 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA--SLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRIN 583 (609)
Q Consensus 510 ~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~--~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp~~~~~~y~ 583 (609)
.+....+..+.++|+|||||+|+++++.+++++. ..++.+|.+.+ .+++++|+|+||+.++..++|.++-..|.
T Consensus 114 ~~~~~~~~~~~~~~~~~GkG~gt~~l~~li~~~f~~~~~~~ri~~~v~~~N~~s~rl~erlGF~~~ge~d~~~~~~~l~~ 193 (198)
T d1yk3a1 114 DPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNRRMALYA 193 (198)
T ss_dssp CTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEECSSCEEEEEE
T ss_pred CCCceEEEEEEEChhhcCCcHHHHHHHHHHHHHHhhcCCccEEEEEeCCCCHHHHHHHHHcCCEEEeEEecCCCcEEEEE
Confidence 1344567789999999999999999999999985 35899999988 48999999999999999888865544433
|
| >d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL species: Salmonella typhimurium [TaxId: 90371]
Probab=99.20 E-value=1.2e-10 Score=107.85 Aligned_cols=126 Identities=12% Similarity=0.104 Sum_probs=92.6
Q ss_pred ccccccccCCcCCHHHHHHHHhhhHh--hccC----ccCCHHHHHhh-----------cCeEEEEEECCEEEEEEEEEEe
Q 007275 446 DLYEGTRTAKVTDLSGIKQIIQPLVE--SGAL----VRRTDEELLKA-----------LDSFYVVEREGQIIACAALFPF 508 (609)
Q Consensus 446 d~~~~IR~a~~~D~~~I~~L~~~~~~--~~~~----~~~~~e~l~~~-----------i~~~~V~~~dg~IVG~~~l~~~ 508 (609)
.....+|+++++|.+.|.+++.+... ..+. ...+.++...+ ...++++..++++||++.+...
T Consensus 6 ~~~l~LR~~~~~d~~~l~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~ 85 (174)
T d1s7ka1 6 STTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAI 85 (174)
T ss_dssp SSSEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEcCCHHHHHHHHHHHHcCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHcCCCceeEEEEcCCceEEEeeccc
Confidence 45567999999999999998754211 1110 01122221111 1357788889999999999754
Q ss_pred c-CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 509 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 509 ~-~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
. ....++| .+.|+|+|||+|+|++++..+++++. ..+++++.+.+ .++.++|+|+||+..+..
T Consensus 86 ~~~~~~~ei-g~~i~~~~~gkG~~~ea~~~l~~~~f~~~~~~~l~a~~~~~N~~S~~~~~k~Gf~~eG~~ 154 (174)
T d1s7ka1 86 EPINKAAYI-GYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCM 154 (174)
T ss_dssp ETTTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCeEEE-EEEEeehhccchhHHHHHHHHHhhhhhhcCcccceeecccCcHHHHHHHHHCCCEEEEEE
Confidence 3 3567888 67889999999999999999999995 47999999988 489999999999998865
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.19 E-value=6.9e-11 Score=118.49 Aligned_cols=121 Identities=12% Similarity=0.185 Sum_probs=93.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhh--cCeEEEEEECCEEEEEEEEEEecC---C---CeEEEEEEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--LDSFYVVEREGQIIACAALFPFFK---E---KCGEVAAIG 520 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~--i~~~~V~~~dg~IVG~~~l~~~~~---~---~~~eI~~ia 520 (609)
..||+++++|++.+.+++........ .+...+.+... ...++++.++|++||++.+.|..- + ..+.|..++
T Consensus 3 ~~iR~l~~~d~~~i~~l~~~~F~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~ 81 (285)
T d2hv2a2 3 KRVKKMGKEEMKEMFDLVIYAFNQEP-TAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 81 (285)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCCCC-ChhHHHHHHHhhccCcEEEEEECCEEEEEEEEEEeEEEECCeeeeEEEEEEEE
Confidence 46999999999999999765432211 11112222222 256888999999999999886421 1 347899999
Q ss_pred EcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeee
Q 007275 521 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571 (609)
Q Consensus 521 V~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~ 571 (609)
|+|+|||+|+|++||+.+++.+++.|+..+.+.+ .+.+||+++||+.++.
T Consensus 82 v~p~~rg~G~~~~l~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 131 (285)
T d2hv2a2 82 SYPEYRGEGGISAIMKEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 131 (285)
T ss_dssp ECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred ECHHHcCCChHHHHHHHHHHHHHHhCCceeeeec-cchhhHhcCCcEEeee
Confidence 9999999999999999999999999999888865 3578999999997643
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.17 E-value=8.8e-11 Score=117.89 Aligned_cols=121 Identities=15% Similarity=0.267 Sum_probs=92.4
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccC----cc-CCHHHHHh------hcCeEEEEEECCEEEEEEEEEEec---CC---C
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGAL----VR-RTDEELLK------ALDSFYVVEREGQIIACAALFPFF---KE---K 512 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~----~~-~~~e~l~~------~i~~~~V~~~dg~IVG~~~l~~~~---~~---~ 512 (609)
+||+++++|++++.+|.+........ .. .....+.. ....++++.+||++||++.+.++. .+ .
T Consensus 2 ~iR~~~~~d~~~i~~L~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~~ 81 (291)
T d2i00a2 2 TLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALYK 81 (291)
T ss_dssp EEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHcCcccccchhcchhhhHHHHHhhccccccCcEEEEEECCEEEEEEEEEEeEEEECCeeee
Confidence 69999999999999998754221110 11 11222221 125788999999999999998643 11 3
Q ss_pred eEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeee
Q 007275 513 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 571 (609)
Q Consensus 513 ~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~ 571 (609)
.+.|..++|+|+|||+|+|++||+.+++.+++.|+....+.+ .+.+||+++||+.++.
T Consensus 82 ~~~i~~v~v~p~~r~~G~~~~L~~~~~~~~~~~~~~~~~l~~-~~~~~Y~~~Gf~~~~~ 139 (291)
T d2i00a2 82 MGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFP-YNIPYYRRKGWEIMSD 139 (291)
T ss_dssp EEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred EEEEEEEEEchhhcCCChHHHHHHHHHHHHHhcCCcEEEeec-cchhhHhcCCCEEecc
Confidence 478999999999999999999999999999999998887765 3578999999998753
|
| >d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YdaF species: Bacillus subtilis [TaxId: 1423]
Probab=99.15 E-value=3.3e-10 Score=105.16 Aligned_cols=124 Identities=12% Similarity=0.067 Sum_probs=93.4
Q ss_pred ccccccCCcCCHHHHHHHHhhhHh--hcc----CccCCHHHHHhhc------------CeEEEEEECCEEEEEEEEEEe-
Q 007275 448 YEGTRTAKVTDLSGIKQIIQPLVE--SGA----LVRRTDEELLKAL------------DSFYVVEREGQIIACAALFPF- 508 (609)
Q Consensus 448 ~~~IR~a~~~D~~~I~~L~~~~~~--~~~----~~~~~~e~l~~~i------------~~~~V~~~dg~IVG~~~l~~~- 508 (609)
-..||+++++|.+.+.+++..... ..+ ..+.+.+.+.+.+ ...+++..++++||++.+...
T Consensus 10 ~l~LR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~ 89 (180)
T d1nsla_ 10 HITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLD 89 (180)
T ss_dssp SEEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHhcChHHHhhhcccCCCCccHHHHHHHHHHHHHHhhhccCcEEEEEEECCcEEEEEEeeecc
Confidence 357999999999999999753211 111 1223333332221 345666789999999998864
Q ss_pred cCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 509 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 509 ~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
.....++|+ +.|+|+|||+|+|++++..++++|. ..++++|.+.+ .+++++|+|+||+..+..
T Consensus 90 ~~~~~~eig-~~i~~~~~g~G~~~e~~~~~~~~af~~~~~~~i~~~v~~~N~~s~~~~~k~GF~~eg~~ 157 (180)
T d1nsla_ 90 QVNRKAEIG-YWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKA 157 (180)
T ss_dssp TTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred cCCCeEEEE-EeecccccccccchhhhhhhhhccccccCcceeecccccccHHHHHHHHHCCCEEEEEE
Confidence 345678994 8899999999999999999999995 56999999988 489999999999998754
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.14 E-value=1.4e-10 Score=108.77 Aligned_cols=116 Identities=25% Similarity=0.338 Sum_probs=84.0
Q ss_pred ccccCCcCCH-----HHHHHHHhhhHhhccCccCCHHHHHhhcCe-EEEEEECCEEEEEEEEEEec---C---CCeEEEE
Q 007275 450 GTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKALDS-FYVVEREGQIIACAALFPFF---K---EKCGEVA 517 (609)
Q Consensus 450 ~IR~a~~~D~-----~~I~~L~~~~~~~~~~~~~~~e~l~~~i~~-~~V~~~dg~IVG~~~l~~~~---~---~~~~eI~ 517 (609)
++|.+...|+ +++..+.. ..|...++.+.+...... .+++.++++++|++.+.+.. . ...++|.
T Consensus 7 T~R~~~~~dld~~~~~~i~~l~~----~aF~~d~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~ 82 (181)
T d1m4ia_ 7 TARLVHTADLDSETRQDIRQMVT----GAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVE 82 (181)
T ss_dssp CCEEEEGGGCCHHHHHHHHHHHH----HHTTTCCCHHHHHHTCSSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred eeeecchhhCCHHHHHHHHHHHH----HhccCCCCHHHHhhhcCceEEEEEeCCceeEEEEEEEEEEecCCcccceEEEE
Confidence 4555554444 45555543 334445667777666643 45667899999999886421 1 1357899
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEee
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 570 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~ 570 (609)
.++|+|+|||+|+|++||+.+++.+++.+ ....+.+ ..+.+||+++||+...
T Consensus 83 ~v~V~p~~Rg~Gig~~Ll~~~~~~~r~~~-~~~~l~~~~~~~~fY~~~G~~~~~ 135 (181)
T d1m4ia_ 83 GVAVRADWRGQRLVSALLDAVEQVMRGAY-QLGALSSSARARRLYASRGWLPWH 135 (181)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHHC-SEEEEECCTTTHHHHHHTTCEECC
T ss_pred EEEEcHHHCCCHHHHHHHHHHHHHHHhcC-CEEEEecchhhHHHHHHcCCEEcC
Confidence 99999999999999999999999998765 4555665 4788999999999764
|
| >d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA3270 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.10 E-value=8.1e-10 Score=103.13 Aligned_cols=126 Identities=13% Similarity=0.015 Sum_probs=96.9
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhh-cc-CccCCHHHHHhhc-------CeEEEEEECCEEEEEEEEEEe-cCCCeEEE
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVES-GA-LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPF-FKEKCGEV 516 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~-~~-~~~~~~e~l~~~i-------~~~~V~~~dg~IVG~~~l~~~-~~~~~~eI 516 (609)
....+||++++|.+.+.++.+..... .+ ..+...+.+...+ ...|++..++++||++.+... +....++|
T Consensus 8 ~~l~Lrpl~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~i~l~~~~~~~~~~ei 87 (183)
T d1yrea1 8 GALRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEI 87 (183)
T ss_dssp TTEEEEECCGGGHHHHHHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred CCEEEEECCHHHHHHHHHHHhCCHHHhccCCCCCCHHHHHHHHHHHhCCCceEEEEEECCEEEEEEEeeeccccCCeEEE
Confidence 34579999999999999987542211 11 2233333333222 235777889999999999854 45678899
Q ss_pred EEEEEcccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 517 AAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 517 ~~iaV~p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
+.+.++|+|||+|+|++++..+.++|. ..|++++.+.+ .+++++|+|+||+..+..
T Consensus 88 G~~~l~~~~~g~G~~~ea~~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~k~Gf~~eg~~ 148 (183)
T d1yrea1 88 GWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVL 148 (183)
T ss_dssp EEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEEecHHHcCCccchhHHHHHhhhhhhccCcceEEeecccCCHHHHhhHhccCeEEEEEe
Confidence 877899999999999999999999995 56999999988 388999999999998754
|
| >d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative ribosomal-protein-serine acetyltransferase VC1889 species: Vibrio cholerae [TaxId: 666]
Probab=99.08 E-value=7.1e-10 Score=102.89 Aligned_cols=123 Identities=12% Similarity=0.050 Sum_probs=92.5
Q ss_pred cccccCCcCCHHHHHHHHhhhHhh-cc----CccCCHHHHHhhc-----------CeEEEEE--ECCEEEEEEEEEEe-c
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVES-GA----LVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPF-F 509 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~-~~----~~~~~~e~l~~~i-----------~~~~V~~--~dg~IVG~~~l~~~-~ 509 (609)
..||+++.+|.+.+.+++++.... .+ ..+.+.+...+++ ..+|++. .++++||++.+... .
T Consensus 12 l~LR~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~ 91 (178)
T d2fcka1 12 LQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYH 91 (178)
T ss_dssp EEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEEG
T ss_pred EEEEeCCHHHHHHHHHHHcCCHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEeeeccCCceEEEEeeccccc
Confidence 579999999999999987753221 11 1223444433322 2344444 36899999998753 3
Q ss_pred CCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 510 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 510 ~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~-~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
....++| .+.|+|+|||+|+|++++..++++|.+ .++++|.+.+ .++.++|+|+||+..+..
T Consensus 92 ~~~~~ei-g~~i~~~~~g~G~~~e~l~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek~GF~~eg~~ 158 (178)
T d2fcka1 92 TFNMASL-GYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLA 158 (178)
T ss_dssp GGTEEEE-EEEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEE-EEeeecccccchhhhhhhheeeeeeccccCcceeeEecCCCcHHHHHHHHHCCCEEEEEE
Confidence 4578899 489999999999999999999999955 6999999988 389999999999998754
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.07 E-value=5e-10 Score=111.92 Aligned_cols=126 Identities=17% Similarity=0.102 Sum_probs=89.8
Q ss_pred cccccccCCcCCHHHHHHHHhhhHhhccC-ccCCHHHHHhhc-------------CeEEEEEECCEEEEEEEEEEecC-C
Q 007275 447 LYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK-E 511 (609)
Q Consensus 447 ~~~~IR~a~~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~i-------------~~~~V~~~dg~IVG~~~l~~~~~-~ 511 (609)
.+...+.....|.+.+.++.......... .++..+.+..+. ...++.+.||+++|++.+....+ .
T Consensus 149 ~~~~~~~~~~~d~~~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vvG~~~~~~~~~~~ 228 (308)
T d1p0ha_ 149 GVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHP 228 (308)
T ss_dssp TEEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTST
T ss_pred ceeeecccchHHHHHHHHHHHhhhhhccccccchhHHHHHHHhccccCcccccceeeecccccCCeEEEEEEEEEcCCCC
Confidence 33445667788888888887665443332 344555444432 12344567999999998875433 4
Q ss_pred CeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC----------CCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 512 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL----------GLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 512 ~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~----------G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
..++|..++|+|+|||+|+|+.|+..++++++++ |+..+.|.+ .+|.+||+++||++++..
T Consensus 229 ~~~~i~~~~V~p~~RGrGlG~~Ll~~~~~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~A~~lY~~~GF~~~~~~ 303 (308)
T d1p0ha_ 229 GLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVD 303 (308)
T ss_dssp TEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEeccEECHHHcCCCHHHHHHHHHHHHHHHhCCcceeeecCCccEEEEeccCCCHHHHHHHHHCCCEEeceE
Confidence 6789999999999999999999999999999887 666677766 378999999999998765
|
| >d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltranferase Atu2435 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.03 E-value=1.5e-09 Score=97.94 Aligned_cols=126 Identities=11% Similarity=0.018 Sum_probs=97.3
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc-----------CeEEEEE--ECCEEEEEEEEEEecCCCeEE
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKCGE 515 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i-----------~~~~V~~--~dg~IVG~~~l~~~~~~~~~e 515 (609)
..||+++.+|++.+.++.++.....+..+++.+...++. ..+|++. .++.++|++.+...+.....+
T Consensus 10 L~LRp~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ig~~~~~~~~~~~~~~ 89 (164)
T d2fsra1 10 LTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEKE 89 (164)
T ss_dssp EEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSCE
T ss_pred EEEecCCHHHHHHHHHHHcChhhhhcCCCCCcHHHHHHHHHHHHHHhhcCcceEEEEEcCCCeEEEEEEeeccCccccce
Confidence 469999999999999999876655555555554433322 2344444 368899999987544445566
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEe----HHHHHHHHHCCCeEeeeecch
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 575 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~-~~G~~~I~l~t----~~a~~fYek~GF~~~~~~~lp 575 (609)
+ .+.+.|+|+++|+|..++..++.++. ..|++++.+.+ .+++++|+|+||+..+.....
T Consensus 90 ~-g~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~GF~~eg~~~~~ 153 (164)
T d2fsra1 90 L-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAPRS 153 (164)
T ss_dssp E-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTSCCS
T ss_pred E-eeEeeeeeccccccccceeEEEeeccccccceeEEEEECcCCHHHHHHHHHCCCEEeeeEccc
Confidence 6 68999999999999999999999886 57999999988 489999999999998775433
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.99 E-value=4.3e-10 Score=113.80 Aligned_cols=113 Identities=15% Similarity=0.126 Sum_probs=87.9
Q ss_pred cccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---CeEEEE-EECCEEEEEEEEEEecCCCeEEEEEEEEccc
Q 007275 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVV-EREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (609)
Q Consensus 449 ~~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~~~~V~-~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~ 524 (609)
+.+|+++.+|.+.+.+++ . +..+.+.+.+...+ ..+.++ .++|++||++... ..++|..++|+|+
T Consensus 168 ~~lr~l~~~da~~i~~~W----~--~~~~~s~~~i~~~i~~~~~~gl~~~e~G~lv~w~~~~-----~~g~l~~l~V~p~ 236 (297)
T d1sqha_ 168 FEIRRLRAEDAAMVHDSW----P--NKGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQN-----DFSGLGMLQVLPK 236 (297)
T ss_dssp EEEECCCGGGHHHHHHTC----T--TCSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEEC-----TTSSEEEEEECGG
T ss_pred CEeecCCHHHHHHHHHhc----C--CCCcchHHHHHHHHhhCCeEEEEECCCCCEEEEEEEC-----CCEEEEEEEEChH
Confidence 479999999999988763 1 11234444444433 444444 4569999988554 3467999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEe----HHHHHHHHHCCCeEeeee
Q 007275 525 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 572 (609)
Q Consensus 525 ~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t----~~a~~fYek~GF~~~~~~ 572 (609)
|||+|+|+.|++.+.+++++.|+..+++.+ .++.+||+|+||+.++..
T Consensus 237 ~r~~G~g~~l~~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~klGF~~~~~~ 288 (297)
T d1sqha_ 237 AERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVN 288 (297)
T ss_dssp GCSSSHHHHHHHHHHHHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred hcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCcHHHHHHHHHCCCEEeeEE
Confidence 999999999999999999999999888877 478999999999988654
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.97 E-value=8.4e-10 Score=93.80 Aligned_cols=76 Identities=22% Similarity=0.277 Sum_probs=68.0
Q ss_pred cCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHC
Q 007275 487 LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 564 (609)
Q Consensus 487 i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~ 564 (609)
...||+.+++|+++|++.+.+ .+++.++|..++|.|+|||||+|++|++.++++|++.|+ ++...|+-+..||+|+
T Consensus 10 ~~~f~v~~~~g~~vg~~~~~~-~~~~~~~i~~~~V~p~~RG~Gig~~Lv~~~l~~Ar~~g~-kvvp~c~y~~~~~~k~ 85 (102)
T d1r57a_ 10 ENKFYIGDDENNALAEITYRF-VDNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNL-KIIASCSFAKHMLEKE 85 (102)
T ss_dssp TTEEEEESSSTTEEEEEEEEE-SSSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTC-EEEESSHHHHHHHHHC
T ss_pred CCEEEEEEeCCceEEEEEEEE-cCCCEEEEEEEEEChHHCCccHHHHHHHHHHHHHHHCCC-EEEEecHhHHHHHHhC
Confidence 367899999999999999885 456789999999999999999999999999999999998 4667788899999986
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.43 E-value=1e-07 Score=94.63 Aligned_cols=121 Identities=14% Similarity=0.093 Sum_probs=85.7
Q ss_pred cc-cCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc---C---eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcc
Q 007275 451 TR-TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---D---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523 (609)
Q Consensus 451 IR-~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i---~---~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p 523 (609)
.| .++++|++.+.+|+.......-..+...+.+.... . .+++.+.+|+++||+.+.+. ++....+..++|+|
T Consensus 4 ~r~~l~~~d~~~v~~l~~~~~~~d~~~p~~e~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~-~~~~~~~~~~~V~P 82 (308)
T d1p0ha_ 4 WRSALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPP-RGAGGAMAELVVHP 82 (308)
T ss_dssp CBSCCCHHHHHHHHHHHHHHHHHHSSCSSCHHHHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEECG
T ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCccHHHHHhhhccCCCceEEEEEecCCEEEEEEEEEec-CCCceeEEEEEECH
Confidence 45 48899999999998776554323344554444332 1 13344578999999998743 44456777899999
Q ss_pred cCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHHHHHHCCCeEeeee
Q 007275 524 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 572 (609)
Q Consensus 524 ~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~fYek~GF~~~~~~ 572 (609)
+||++|||++|++.+++.++..+...+......+..+|.++||......
T Consensus 83 ~~R~~GiG~~Ll~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 131 (308)
T d1p0ha_ 83 QSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVREL 131 (308)
T ss_dssp GGCSSSHHHHHHHHHHHHTTTCCEEEEGGGCHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCCHHHHHHHHHHHHHhhhccceecccchhhHHHHHhccccccccc
Confidence 9999999999999999988776554443333578899999999976543
|
| >d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Autoinducer synthesis protein LasI species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.06 E-value=9.9e-06 Score=75.98 Aligned_cols=114 Identities=10% Similarity=0.149 Sum_probs=82.2
Q ss_pred cCCHHHHHHHHhhhHhh--ccCcc----CCHHHHHhhcCeEEEEEECCEEEEEEEEEEec--------------------
Q 007275 456 VTDLSGIKQIIQPLVES--GALVR----RTDEELLKALDSFYVVEREGQIIACAALFPFF-------------------- 509 (609)
Q Consensus 456 ~~D~~~I~~L~~~~~~~--~~~~~----~~~e~l~~~i~~~~V~~~dg~IVG~~~l~~~~-------------------- 509 (609)
.++++++.++....+-. ++..+ ...+++...-..+++...+++++|++.+.+..
T Consensus 16 ~~~l~~~~rlR~~VFv~E~gw~~~~~~g~E~D~~D~~~~~~lv~~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~~ 95 (197)
T d1ro5a_ 16 KKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPC 95 (197)
T ss_dssp HHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCCCcccccccCCCcccEEEEeccccceEEEEEeecCCCCCcccccchhhhcCccccC
Confidence 34456667776664432 33221 11233333334567777899999999997521
Q ss_pred CCCeEEEEEEEEcccCcCC----cHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEe
Q 007275 510 KEKCGEVAAIGVSPECRGQ----GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 569 (609)
Q Consensus 510 ~~~~~eI~~iaV~p~~Rgq----GiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~ 569 (609)
....+++.+++|+|++|++ .++..|+..+.++|.++|++.++..+ ....+||+++||...
T Consensus 96 ~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~~~~~~~a~~~G~~~~~~~~~~~~~r~~~r~G~~~~ 160 (197)
T d1ro5a_ 96 SPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDVS 160 (197)
T ss_dssp CTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEEE
T ss_pred CCceEEEEEEEEccccccccchhHHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCcEE
Confidence 1346899999999999655 48899999999999999999998887 477899999999654
|
| >d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Acyl-homoserinelactone synthase EsaI species: Pantoea stewartii subsp. stewartii [TaxId: 66271]
Probab=97.58 E-value=3.8e-05 Score=72.67 Aligned_cols=87 Identities=10% Similarity=0.054 Sum_probs=70.1
Q ss_pred HHHhhcCeEEEEEECCEEEEEEEEEEec------------------CCCeEEEEEEEEcccCcCC------cHHHHHHHH
Q 007275 482 ELLKALDSFYVVEREGQIIACAALFPFF------------------KEKCGEVAAIGVSPECRGQ------GQGDKLLDY 537 (609)
Q Consensus 482 ~l~~~i~~~~V~~~dg~IVG~~~l~~~~------------------~~~~~eI~~iaV~p~~Rgq------GiG~~LL~~ 537 (609)
++...-..+++...+|+++|++.+.+.. ....+|+.+++|+|++|+. .+...|+..
T Consensus 46 ~yD~~~~~~lv~~~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~~~ 125 (210)
T d1kzfa_ 46 EFDGPGTRYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLA 125 (210)
T ss_dssp TTCSTTCEEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHHHH
T ss_pred ccCCCCCEEEEEEcCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHHHHH
Confidence 3433334577777899999999997632 1246899999999999865 378899999
Q ss_pred HHHHHHHCCCCEEEEEeH-HHHHHHHHCCCeE
Q 007275 538 IEKKAASLGLDMLFLLTT-RTADWFKSRGFRE 568 (609)
Q Consensus 538 l~~~A~~~G~~~I~l~t~-~a~~fYek~GF~~ 568 (609)
+.++|.+.|++.++..++ ...++|.++||..
T Consensus 126 ~~~~a~~~Gi~~~~~v~~~~~~r~~~r~G~~~ 157 (210)
T d1kzfa_ 126 MVNWAQNNAYGNIYTIVSRAMLKILTRSGWQI 157 (210)
T ss_dssp HHHHHHHTTCSEEEEEEEHHHHHHHHHHCCCC
T ss_pred HHHHHHHCCCCEEEEEeCHHHHHHHHHCCCCe
Confidence 999999999999988884 6789999999954
|
| >d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein AT1g77540 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.31 E-value=0.00039 Score=57.14 Aligned_cols=63 Identities=16% Similarity=0.061 Sum_probs=49.6
Q ss_pred EEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEEeHHHHH-HHHHC
Q 007275 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSR 564 (609)
Q Consensus 501 G~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~t~~a~~-fYek~ 564 (609)
|++.+....++....|....|.|++||||+|++|++.++++|++.|. +|.-.|.-+.+ |.+++
T Consensus 20 a~~~y~~~~~~~~i~i~HT~V~~~~rGqGia~~Lv~~al~~ar~~g~-kV~P~Cpyv~~~~~~kh 83 (95)
T d1xmta_ 20 AFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSI-SIIPSCSYVSDTFLPRN 83 (95)
T ss_dssp SEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTC-EEEECSHHHHHTHHHHC
T ss_pred EEEEEEEeCCCcEEEEEEEEeCcccCCChHHHHHHHHHHHHHHHCCC-EEEEeCHHHHHHHHHhC
Confidence 34444433455677899999999999999999999999999999996 67777876554 77764
|
| >d1ylea1 d.108.1.8 (A:1-338) Arginine N-succinyltransferase, alpha chain, AstA {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: AstA-like domain: Arginine N-succinyltransferase, alpha chain, AstA species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.12 E-value=0.0012 Score=65.63 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=86.9
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHHHHHhhc----------------C-eEEEEEE--CCEEEEEEEEEE---
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------D-SFYVVER--EGQIIACAALFP--- 507 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~i----------------~-~~~V~~~--dg~IVG~~~l~~--- 507 (609)
-|||++.+|+++|.+|-+..-..-...|.+.+.+.+.+ . .++|.|+ +|+|+|++++..
T Consensus 3 viRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~YlFVLED~~~g~vvGts~I~a~vG 82 (338)
T d1ylea1 3 VMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASAG 82 (338)
T ss_dssp EEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESSTT
T ss_pred EEEeCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhccCCCCCCccEEEEEEeCCCCeEEEEEeEEEeec
Confidence 48999999999999995432211122444555444333 1 3566775 589999999842
Q ss_pred --------------------------------ecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHH---HCCCCEEEE
Q 007275 508 --------------------------------FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDMLFL 552 (609)
Q Consensus 508 --------------------------------~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~---~~G~~~I~l 552 (609)
.+-.++.||+.++++|+||+.|.|+.|-..=.-+.. ++--+++..
T Consensus 83 ~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~L~~d~tg~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~~rF~~~viA 162 (338)
T d1ylea1 83 FSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVVV 162 (338)
T ss_dssp SSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEEE
T ss_pred CCCCcEEEEeCceeecccccCCccccceEEEeccCCCCeeEEEEEECHHHcCCcchhHHHHHHHHHHHHhHHhhhhhhhh
Confidence 011356789999999999999999988765555443 345667777
Q ss_pred Ee------HHHHHHHHHCCCeEeeeecchhHhhhhcccCCCceeEEeecCCCC
Q 007275 553 LT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDT 599 (609)
Q Consensus 553 ~t------~~a~~fYek~GF~~~~~~~lp~~~~~~y~~~~~s~i~mkkll~~~ 599 (609)
+- ...-+||+.+|=.-.+.+. ...+... ...++-|+..|.|.+
T Consensus 163 EmRG~~D~~G~SPFWd~lg~hFF~mdF-~~AD~Ls---~~~~k~FIaeLmP~~ 211 (338)
T d1ylea1 163 EIVGYSDEQGESPFWNAVGRNFFDLNY-IEAEKLS---GLKSRTFLAELMPHY 211 (338)
T ss_dssp ECCBCCCTTCCCHHHHHTGGGTSCCCH-HHHHHHH---HHC----------CC
T ss_pred hccCCcCCCCCCchHHHhhCcccCCCh-hHHHHHH---cCCchhhHHhhCCCC
Confidence 65 2346899998876665553 2222211 123566666666653
|
| >d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Methicillin resistance protein FemA species: Staphylococcus aureus [TaxId: 1280]
Probab=95.78 E-value=0.022 Score=51.13 Aligned_cols=80 Identities=13% Similarity=-0.056 Sum_probs=61.3
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE-eH----------HH
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-TT----------RT 557 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~-t~----------~a 557 (609)
.++++..+|++||++.+. .. ++..+....+.+++++..+.+..|+-.++++|.++|++..-+. +. ..
T Consensus 72 ~l~~a~~~~~~ia~~l~~-~~-~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG~~~~~~~~~~~~Gl 149 (182)
T d1lrza3 72 LVPLAYINELPISAGFFF-IN-PFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGV 149 (182)
T ss_dssp ECEEEEEEEEEEEEEEEE-EC-SSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHHH
T ss_pred eeeeeecCCccEEEEEEE-ee-chhheeeeceeccchhhcCchHHHHHHHHHHHHHcCCcEEEecCcCCCCCCCcccchH
Confidence 456777889999987766 33 3455555678999999999999999999999999999998774 21 24
Q ss_pred HHHHHHCCCeEee
Q 007275 558 ADWFKSRGFRECS 570 (609)
Q Consensus 558 ~~fYek~GF~~~~ 570 (609)
.+|-+++|=+.+.
T Consensus 150 ~~FK~~fg~~~v~ 162 (182)
T d1lrza3 150 VKFKKGYNAEIIE 162 (182)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHhcCCceee
Confidence 5677777777664
|
| >d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.81 E-value=0.015 Score=50.46 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=65.8
Q ss_pred CCHHHHHHHHhhhHhhc----cCccCCHHHHHhhcC------eE-EEE--EECCEEEEEEEEEEec------CCCeEEEE
Q 007275 457 TDLSGIKQIIQPLVESG----ALVRRTDEELLKALD------SF-YVV--EREGQIIACAALFPFF------KEKCGEVA 517 (609)
Q Consensus 457 ~D~~~I~~L~~~~~~~~----~~~~~~~e~l~~~i~------~~-~V~--~~dg~IVG~~~l~~~~------~~~~~eI~ 517 (609)
+++.++..+++..+-+. |....+.+.+...+. .+ ..+ ..++++|||+.-.|.. .-+..+|.
T Consensus 13 ~~~~el~~lL~~nYVeddd~~frf~Ys~efl~Wal~~Pg~~~~w~igvr~~~~~kLVgfIs~~P~~i~i~~~~~~~~~In 92 (141)
T d1rxta1 13 GVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEIN 92 (141)
T ss_dssp HHHHHHHHHHHTSSCCCCSSCCCBCCCHHHHHHHHCCTTCCGGGSEEEECSSSSCEEEEECCEECCCCCSSSCCCCEECC
T ss_pred HHHHHHHHHHHHhcccCCCceEEEEeCHHHcEEEecCCCCCcCcEEEEEEccCCeEEEEEeceEEEEEEeCCEeEEEEEE
Confidence 34556666666543332 224456666655542 12 222 3579999999988731 13678999
Q ss_pred EEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 007275 518 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550 (609)
Q Consensus 518 ~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I 550 (609)
-++||+++|.++++..|++.+.+++...|+-+-
T Consensus 93 FLCVhKklR~k~lAPvLI~EitRr~n~~gI~qa 125 (141)
T d1rxta1 93 FLCVHKKLRSKRVAPVLIREITRRVHLEGIFQA 125 (141)
T ss_dssp CCEECSSCCCSSSHHHHHHHHHHHHTTTTCCCE
T ss_pred EEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence 999999999999999999999999988887543
|
| >d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=94.39 E-value=0.06 Score=47.63 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=64.8
Q ss_pred CCHHHHHHHHhhhHhhc----cCccCCHHHHHhhcC------eE-EEE--EECCEEEEEEEEEEe----c-CC---CeEE
Q 007275 457 TDLSGIKQIIQPLVESG----ALVRRTDEELLKALD------SF-YVV--EREGQIIACAALFPF----F-KE---KCGE 515 (609)
Q Consensus 457 ~D~~~I~~L~~~~~~~~----~~~~~~~e~l~~~i~------~~-~V~--~~dg~IVG~~~l~~~----~-~~---~~~e 515 (609)
+++.++..++++.+-+. |....+.+-+...+. .+ ..+ ..++++|||++-.|. . .+ +..+
T Consensus 35 ~~l~ely~lL~~nYVeDdd~~frf~YS~efL~WaL~~Pg~~~~w~vgvR~~~~~kLvgfIs~~P~~i~i~~~~~~~~~~~ 114 (165)
T d1iyka1 35 LQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVE 114 (165)
T ss_dssp HHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTTTEEEEEEE
T ss_pred HHHHHHHHHHHhhcccCccceEEEecCHHHhhhhhcCCCCCccceEEEEEccCCcEEEEEecceEEEEEecCCcEEEEEE
Confidence 34455556665543332 223466666665552 22 222 246899999988762 1 12 4589
Q ss_pred EEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 007275 516 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 550 (609)
Q Consensus 516 I~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I 550 (609)
|.-++||+++|.++++-.|++.+.+++...|+-+-
T Consensus 115 INFLCVhKklR~KrlAPvLI~EitRr~n~~gI~qA 149 (165)
T d1iyka1 115 INFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQA 149 (165)
T ss_dssp EEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCE
T ss_pred EEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence 99999999999999999999999999998887543
|
| >d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.74 E-value=0.064 Score=48.64 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=63.1
Q ss_pred CHHHHHHHHhhhHhhc----cCccCCHHHHHhhcC-------eEEEEE--ECCEEEEEEEEEEec---C---CCeEEEEE
Q 007275 458 DLSGIKQIIQPLVESG----ALVRRTDEELLKALD-------SFYVVE--REGQIIACAALFPFF---K---EKCGEVAA 518 (609)
Q Consensus 458 D~~~I~~L~~~~~~~~----~~~~~~~e~l~~~i~-------~~~V~~--~dg~IVG~~~l~~~~---~---~~~~eI~~ 518 (609)
++..+..+++..+-+. |....+.+.+...+. ..+.+. .++++|||++-.|.. . -...+|.-
T Consensus 58 ~l~el~~lL~~nYved~d~~frf~Ys~~~l~w~l~~Pg~~~~~~igvr~~~~~KLvg~Is~~P~~i~i~~~~~~~~~VnF 137 (185)
T d1iica1 58 QLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINF 137 (185)
T ss_dssp HHHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHHHHhhccccccceEEeecCHHHheeeecCCCCCcCCEEEEEEccCCcEEEEEeeeEEEEEEcCeEEEEEEEEE
Confidence 3444555655533222 223456665554441 233333 368999999987631 1 25689999
Q ss_pred EEEcccCcCCcHHHHHHHHHHHHHHHCCCC-EEE
Q 007275 519 IGVSPECRGQGQGDKLLDYIEKKAASLGLD-MLF 551 (609)
Q Consensus 519 iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~-~I~ 551 (609)
+|||+++|.+|++-.|++.+.+++...|+- .++
T Consensus 138 LCVhkk~R~K~lAPvLI~EitRr~n~~~i~qavy 171 (185)
T d1iica1 138 LCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALY 171 (185)
T ss_dssp EEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred EEEchhHhhcCCcHHHHHHHHHHhcccCeEEEEE
Confidence 999999999999999999999999988874 444
|
| >d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HAT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.02 E-value=0.15 Score=50.03 Aligned_cols=58 Identities=10% Similarity=0.233 Sum_probs=45.3
Q ss_pred CCEEEEEEEEEEecC-------------CCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHC-CCCEEEEE
Q 007275 496 EGQIIACAALFPFFK-------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLL 553 (609)
Q Consensus 496 dg~IVG~~~l~~~~~-------------~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~-G~~~I~l~ 553 (609)
...++|+++.+.++. .....|.++.|.|-|||+|+|+.|++.+-+.+.+. ++..|.++
T Consensus 179 ~~~~~Gy~T~Y~~~~Y~~~~~f~~~~~~~~R~RISQ~LILPPyQ~kG~G~~L~~~iy~~~~~d~~v~eiTVE 250 (315)
T d1boba_ 179 TKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVE 250 (315)
T ss_dssp TCCEEEEEEEEEECCC---------CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEES
T ss_pred CCcccceeeeeeeeeccccccccccccccccceeEEEEEeCccccCCchHHHHHHHHHHHhcCCCeeecccc
Confidence 457999999876421 22467999999999999999999999999888764 55555443
|
| >d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable histone acetyltransferase MYST1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.44 E-value=0.11 Score=49.48 Aligned_cols=49 Identities=16% Similarity=0.126 Sum_probs=40.5
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
++||+..-.. .......|+||.|.|.||++|+|+.|++..=+.++..|.
T Consensus 121 h~vGYFSKEk-~s~~~~NLsCIltlP~yQrkGyG~lLI~fSYeLSr~E~~ 169 (271)
T d2giva1 121 HIVGYFSKEK-ESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLEST 169 (271)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeeeeEe-ccCCCceeeeeeccCHHHhcCHhHhHHhhhhhhhhccCC
Confidence 4899887763 223457899999999999999999999999988887763
|
| >d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Peptidyltransferase FemX species: Weissella viridescens [TaxId: 1629]
Probab=90.75 E-value=1.2 Score=38.41 Aligned_cols=62 Identities=15% Similarity=0.076 Sum_probs=43.3
Q ss_pred eEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q 007275 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 553 (609)
Q Consensus 489 ~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~~~I~l~ 553 (609)
.++++..+|+++|.+.+... . +.++...-+..+ .....-+..|+-.++++|++.|++..-+.
T Consensus 65 ~l~~~~~~g~~va~~l~~~~-~-~~~~y~~~a~~~-~~~~~~~~~L~~~~i~~~~~~G~~~~D~g 126 (171)
T d1ne9a2 65 RIFVAEREGKLLSTGIALKY-G-RKIWYMYAGSMD-GNTYYAPYAVQSEMIQWALDTNTDLYDLG 126 (171)
T ss_dssp EEEEEEETTEEEEEEEEEEE-T-TEEEEEEEEECS-SCCTTHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEEeCCeEEEEEEEEEE-C-CEEEEEEccccc-ccccccHHHHHHHHHHHHHHcCCcEEEeC
Confidence 35667789999998766633 3 333332334444 44555688888899999999999998775
|
| >d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase MYST3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.61 E-value=0.24 Score=46.94 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=40.1
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.++|+..-... ......|+||.|.|.||++|+|+.|++..=+.++..|.
T Consensus 121 h~vGyFSKEk~-s~~~~NLsCIltLP~~QrkGyG~lLI~fSYeLSr~Eg~ 169 (270)
T d2ozua1 121 HLVGYFSKEKH-CQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQ 169 (270)
T ss_dssp EEEEEEEEESS-CTTCEEESEEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred EEEeecceecc-cccCceeeeeeccchhhhcchhHHHHHHhhhhhhccCC
Confidence 58998776522 23447799999999999999999999999999887763
|
| >d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.61 E-value=0.68 Score=42.95 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=82.0
Q ss_pred ccccCCcCCHHHHHHHHhhhHhh-ccCccCCHHHHHhhcC------------eEEEEEE-CCEEEEEEEEEEecC----C
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------------SFYVVER-EGQIIACAALFPFFK----E 511 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~i~------------~~~V~~~-dg~IVG~~~l~~~~~----~ 511 (609)
.+|+++++|++++.+|++...+. .+....+.+++..|+- ..||+++ ||+|..|+.++..+. .
T Consensus 42 glR~M~~kDv~~V~~LL~~yl~~f~l~~~Ft~eev~Hwflp~~~~~~~~~VI~sYVve~~~g~ITDF~SFY~Lpstvi~~ 121 (237)
T d1iica2 42 GLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNN 121 (237)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECSC
T ss_pred ccccCchhhHHHHHHHHHHHHHhCcceEecCHHHhhheeccccCCCCCCcEEEEEEEECCCCcEeeEEEEEecchhhhCC
Confidence 48999999999999999885543 3345678999998872 1467775 789999999874321 1
Q ss_pred ------CeEEEEEEEEcccCcCC------------cHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEee
Q 007275 512 ------KCGEVAAIGVSPECRGQ------------GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 570 (609)
Q Consensus 512 ------~~~eI~~iaV~p~~Rgq------------GiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~ 570 (609)
..+++--.+-+-+++-. .-=..||..++-.|++.|+...-+.+ -....|.+++.|-.-+
T Consensus 122 ~kh~~l~aAY~fYy~~~~~~~~~~~~~~~~~~a~k~~l~~Li~Dali~Ak~~~fDVFNaL~~mdN~~fLe~lKFg~Gd 199 (237)
T d1iica2 122 TKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGD 199 (237)
T ss_dssp SSCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred CCcceEEEEEEEEEeeccccccccccchhhhhhhcchHHHHHHHHHHHHHHcCCcEEEeccccccHHHHHHcCCccCC
Confidence 34566444444444321 22334566666678999998776655 2455799999998754
|
| >d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase ESA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.98 E-value=0.22 Score=47.39 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=39.7
Q ss_pred EEEEEEEEEEecCCCeEEEEEEEEcccCcCCcHHHHHHHHHHHHHHHCCC
Q 007275 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 547 (609)
Q Consensus 498 ~IVG~~~l~~~~~~~~~eI~~iaV~p~~RgqGiG~~LL~~l~~~A~~~G~ 547 (609)
.++|+..-.. .......|+||.|.|.||++|+|+.|++..=+.++..|.
T Consensus 124 h~vGyFSKEk-~s~~~nNLaCIltLP~~QrkGyG~~LI~fSYeLSr~E~~ 172 (273)
T d1fy7a_ 124 HLVGYFSKEK-ESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENK 172 (273)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred eeeeecceec-cccCCceeEEEEecChHHhcchhhhHHHHHHHHhhhccc
Confidence 5888876652 222347799999999999999999999999999987654
|
| >d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=89.82 E-value=0.4 Score=44.27 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=82.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhh-ccCccCCHHHHHhhc--C---------eEEEEE-ECCEEEEEEEEEEecC-----C
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKAL--D---------SFYVVE-REGQIIACAALFPFFK-----E 511 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~i--~---------~~~V~~-~dg~IVG~~~l~~~~~-----~ 511 (609)
.+|+++++|++++.+|++...+. .+....+.+++..|+ . ..||++ ++|+|..|++++..+. .
T Consensus 42 glR~M~~kDv~~V~~LL~~yl~~f~l~~~F~~eev~Hwflp~~~~~~~~Vi~sYVve~~~g~ItDF~SFY~Lpstvi~~~ 121 (227)
T d1iyka2 42 GLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNA 121 (227)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSCS
T ss_pred CcccCchhhHHHHHHHHHHHHHcCcceEecCHHHHHHhhcCccccCCCCeEEEEEEECCCCcEeEEEEEeeccHHhhCCC
Confidence 49999999999999999885433 334567899999987 1 256766 4789999999874321 1
Q ss_pred -----CeEEEEEEEEcccCc---CCcHHHHHHHHHHHHHHHCCCCEEEEEe-HHHHHHHHHCCCeEee
Q 007275 512 -----KCGEVAAIGVSPECR---GQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 570 (609)
Q Consensus 512 -----~~~eI~~iaV~p~~R---gqGiG~~LL~~l~~~A~~~G~~~I~l~t-~~a~~fYek~GF~~~~ 570 (609)
..+++ -.++...+- -+.-=..||..++-.|++.|+...-+.. -....|.+++.|-.-+
T Consensus 122 ~h~~l~aAY~-fY~~~~~~~~~~~k~~l~~Li~Dali~Ak~~~fDVFNaL~~mdN~~fLe~lKFg~Gd 188 (227)
T d1iyka2 122 QHDELGIAYL-FYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGD 188 (227)
T ss_dssp SCSEECEEEE-EEEEETTTTSTTHHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred ccceEEEEEE-EEEEeecccchhhhhhHHHHHHHHHHHHHHcCCcEEEcccccccHHHHHHcCCccCC
Confidence 33555 223332221 1233456777777788999998776655 2455799999998754
|
| >d2d4pa1 d.108.1.1 (A:1-130) Hypothetical protein TTHA1254 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein TTHA1254 species: Thermus thermophilus [TaxId: 274]
Probab=87.13 E-value=3.9 Score=33.27 Aligned_cols=111 Identities=15% Similarity=0.130 Sum_probs=79.2
Q ss_pred ccccCCcCCHHHHHHHHhhhHhhccCccCCHH--HHHhhcCeEEEEEECCEEEEEEEEEEecCCCeEEEEEEEEcccCcC
Q 007275 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDE--ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (609)
Q Consensus 450 ~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~e--~l~~~i~~~~V~~~dg~IVG~~~l~~~~~~~~~eI~~iaV~p~~Rg 527 (609)
.+|+.++.|++.+..+.- ..+.+.. .+.+...+.|++++++.+.||+.....|.++...+-.-.+ +-+.
T Consensus 2 r~r~f~e~d~d~L~~~~g-------~~~~sl~alrfyeRsgHsF~Aed~e~~~Gf~lAQavWqGdrptVl~~r~--~~~~ 72 (130)
T d2d4pa1 2 RFRPFTEEDLDRLNRLAG-------KRPVSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRI--EGRS 72 (130)
T ss_dssp EEECCCGGGHHHHHHTST-------TSCCCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEE--EESS
T ss_pred cccccCchhHHHHHHHhc-------cCCCCHHHhhhhhhcCcceeeecCCceeeEeeehhhhcCCCceEEEEec--CCCc
Confidence 478999999999976621 1223333 3344456778999999999999887766654443322222 4456
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEeH----HHHHHHHHCCCeEe
Q 007275 528 QGQGDKLLDYIEKKAASLGLDMLFLLTT----RTADWFKSRGFREC 569 (609)
Q Consensus 528 qGiG~~LL~~l~~~A~~~G~~~I~l~t~----~a~~fYek~GF~~~ 569 (609)
.+.-.-||..+.+-|=.-++..+-+..+ .+.++-+..||..-
T Consensus 73 ee~~~gLL~AvvKSAYDaaVYev~~~ldpa~~a~~~a~ea~~~~~g 118 (130)
T d2d4pa1 73 VEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALG 118 (130)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHhhcceeeEEeeccCHHHHHHHHHHHhhccccC
Confidence 7788889999999998889999888763 56889999998753
|