Citrus Sinensis ID: 007311
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 608 | 2.2.26 [Sep-21-2011] | |||||||
| Q94AC1 | 581 | Rhodanese-like domain-con | yes | no | 0.927 | 0.970 | 0.674 | 0.0 | |
| Q5T7W7 | 516 | Thiosulfate sulfurtransfe | yes | no | 0.513 | 0.604 | 0.373 | 2e-52 | |
| Q5RCP1 | 516 | Thiosulfate sulfurtransfe | yes | no | 0.513 | 0.604 | 0.376 | 2e-52 | |
| Q3U269 | 495 | Thiosulfate sulfurtransfe | yes | no | 0.511 | 0.628 | 0.373 | 7e-52 | |
| A9NHA2 | 318 | UPF0176 protein ACL_1123 | yes | no | 0.381 | 0.729 | 0.361 | 4e-38 | |
| Q4JXR5 | 309 | UPF0176 protein jk0240 OS | yes | no | 0.458 | 0.902 | 0.309 | 5e-38 | |
| Q4A0W6 | 316 | UPF0176 protein SSP0127 O | yes | no | 0.490 | 0.943 | 0.333 | 6e-38 | |
| A8F9I7 | 322 | UPF0176 protein BPUM_0205 | yes | no | 0.379 | 0.717 | 0.359 | 5e-37 | |
| Q92BX1 | 319 | UPF0176 protein Lin1421 O | yes | no | 0.486 | 0.927 | 0.309 | 5e-37 | |
| Q8Y7A4 | 319 | UPF0176 protein Lmo1384 O | yes | no | 0.486 | 0.927 | 0.315 | 7e-37 |
| >sp|Q94AC1|STR6_ARATH Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana GN=STR6 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/606 (67%), Positives = 470/606 (77%), Gaps = 42/606 (6%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
+ +EQYGVLLYYKY+++PDL+ L +FYES+C+ LGLLGRVRL+P GVNVTVGGKL++LE
Sbjct: 15 EDEEQYGVLLYYKYTSVPDLDELVSFYESSCNSLGLLGRVRLSPKGVNVTVGGKLTALEE 74
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
HI A KS LFEGTDFKLAS +PLN KVA ECGFTSLSIR+V+ELVTFS P L PP++
Sbjct: 75 HIAAAKSNCLFEGTDFKLASCHHPLNDKVAEECGFTSLSIRVVEELVTFSPCPPLKPPEI 134
Query: 126 SNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP 185
SNAG+HLSA EFHS+LQS +++K+LVLLDARNLYETRIGKF + +VETLDP
Sbjct: 135 SNAGKHLSAAEFHSVLQSAN------GKSENKELVLLDARNLYETRIGKFESENVETLDP 188
Query: 186 EIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQR 245
EIRQ+SDLPTWID NAE+++GK+VLMYCTGGIRCEMASAY+RSKGAGFEN FQLYGGIQR
Sbjct: 189 EIRQYSDLPTWIDQNAEKMKGKNVLMYCTGGIRCEMASAYIRSKGAGFENTFQLYGGIQR 248
Query: 246 YLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLV 305
YLEQFP GGFFKGKNFVFDHRISVGSS DI+GSCLLC+++FDDYS RCRC CRMLVLV
Sbjct: 249 YLEQFPSGGFFKGKNFVFDHRISVGSSKEDIIGSCLLCNNTFDDYSPRCRCRLCRMLVLV 308
Query: 306 CDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNVSSESTVSPQMPWRN 365
C+ CR++G Y+CELCRKHGK P+S D N SES N
Sbjct: 309 CNHCRVKGDIYICELCRKHGK--GEVPLSLDP-----------LNQPSES---------N 346
Query: 366 GIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSS 425
G RRKLRILCLHGFRQNASSFKGRT SLAKKLKNIAE VFIDAPHEL FIYQT+
Sbjct: 347 GDNTRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTAT--- 403
Query: 426 VIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK 485
PPS C K+FAW V+ DF ET W +A FDP QYQ QT+G D SL YLK
Sbjct: 404 -------PPSGVCNKKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLK 456
Query: 486 TIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA---LHSAEFEHR 542
T F ++GPFDGILGFSQGAAMAA+VC + E+L GEIDFRF +LCSGF L + E R
Sbjct: 457 TAFEEKGPFDGILGFSQGAAMAAAVCGKQEQLVGEIDFRFCVLCSGFTPWPLLEMK-EKR 515
Query: 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKS 602
SI CPSLHIFG G DRQ+ QAS +LA FE+GC+ I+EHD GHIIPT+SPYIDEIK+
Sbjct: 516 SIKCPSLHIFGSQPGKDRQIVTQASSDLAGLFEDGCATIVEHDFGHIIPTKSPYIDEIKA 575
Query: 603 FLQRFL 608
FL +F+
Sbjct: 576 FLYQFI 581
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5T7W7|TSTD2_HUMAN Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 OS=Homo sapiens GN=TSTD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 184/335 (54%), Gaps = 23/335 (6%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
Q E+ VLLYY Y + D + + + C L L G++R+A G+N TVGG +
Sbjct: 163 QGSEEGEVLLYYCYHDLEDPQWICAWQTALCQHLHLTGKIRIAAEGINGTVGGSKLATRL 222
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
+++ + S LF+ L D+ + AH F L + + +E+V ++P +
Sbjct: 223 YVEVMLSFPLFKDD---LCKDDFKTSKGGAH--CFPELRVGVFEEIVPMG----ISPKKI 273
Query: 126 S--NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETL 183
S G HLS EFH ++ ++E + +LLD RN YE++IG+F+ L
Sbjct: 274 SYKKPGIHLSPGEFHKEVEKFLSQANQEQSD----TILLDCRNFYESKIGRFQG----CL 325
Query: 184 DPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI 243
P+IR+FS P+++D N E + K VLMYCTGGIRCE SAY+++KG E VFQL GGI
Sbjct: 326 APDIRKFSYFPSYVDKNLELFREKRVLMYCTGGIRCERGSAYLKAKGVCKE-VFQLKGGI 384
Query: 244 QRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLV 303
+YLE+FPD GF+KGK FVFD R ++ S ++D++ C C + +D Y C CR LV
Sbjct: 385 HKYLEEFPD-GFYKGKLFVFDERYAL-SYNSDVVSECSYCGARWDQY-KLCSTPQCRQLV 441
Query: 304 LVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSK 338
L C C+ +G C C+ G S P+ + K
Sbjct: 442 LTCPACQGQGFTACCVTCQDKGSRKVSGPMQDSFK 476
|
Homo sapiens (taxid: 9606) |
| >sp|Q5RCP1|TSTD2_PONAB Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 OS=Pongo abelii GN=TSTD2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 185/335 (55%), Gaps = 23/335 (6%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
Q E+ VLLYY Y + D + + + C QL L G++R+A G+N TVGG +
Sbjct: 163 QGSEEGEVLLYYCYRDLEDPQWICAWQTALCQQLHLTGKIRIAAEGINGTVGGSKLATRL 222
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
+++ + S LF+ L D+ + AH F L + + +E+V ++P +
Sbjct: 223 YVEVMLSFPLFKDD---LCKDDFKTSKGGAH--CFPELRVGVFEEIVPMG----ISPKKI 273
Query: 126 S--NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETL 183
S G HLS EFH ++ + L + N + +LLD RN YE++IG+F+ L
Sbjct: 274 SYKKPGIHLSPGEFHKEVE---KFLSQAN-QEQSDTILLDCRNFYESKIGRFQG----CL 325
Query: 184 DPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI 243
P+IR+FS P+++D N E + K VLMYCTGGIRCE SAY+++KG E VFQL GGI
Sbjct: 326 APDIRKFSYFPSYVDKNLELFREKRVLMYCTGGIRCERGSAYLKAKGVCKE-VFQLKGGI 384
Query: 244 QRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLV 303
+YLE+FPD GF+KGK FVFD R ++ S ++D++ C C + +D Y C C LV
Sbjct: 385 HKYLEEFPD-GFYKGKLFVFDERYAL-SYNSDVVSECSYCGARWDQY-KLCSTPQCHQLV 441
Query: 304 LVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSK 338
L C C+ +G C C+ G S P+ + K
Sbjct: 442 LTCPACQGQGFTACCVTCQDKGSRKVSGPMQDSFK 476
|
Pongo abelii (taxid: 9601) |
| >sp|Q3U269|TSTD2_MOUSE Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 OS=Mus musculus GN=Tstd2 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 190/335 (56%), Gaps = 24/335 (7%)
Query: 5 NQSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLE 64
Q E+ VLLYY Y + D + + + + C L L G++R+A G+N TVGG +
Sbjct: 161 GQGDEEGEVLLYYCYCDLEDPHWVCAWQTALCHHLHLTGKIRIATEGINGTVGGSKVATR 220
Query: 65 SHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPD 124
+++ + S LF+ D+ L+ D+ + +H F L + + +E+V ++P
Sbjct: 221 LYVEVMLSCPLFK--DY-LSEDDFKSSKGGSH--CFPELRVGVFEEIVPMG----ISPSQ 271
Query: 125 VS--NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVET 182
VS G HLS EFH ++ L +++ + ++LD RN YE++IG+F+
Sbjct: 272 VSYKKPGIHLSPGEFHKEIEK----LLSQSSEEQGNTIILDCRNFYESKIGRFQG----C 323
Query: 183 LDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGG 242
L P+IR+FS P+++D N + + K VLMYCTGGIRCE SAY+R+KG E VFQL GG
Sbjct: 324 LAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKE-VFQLKGG 382
Query: 243 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRML 302
I +YLE+FPD GF+KGK FVFD R ++ + ++ ++ C C + +D Y C CR L
Sbjct: 383 IHKYLEEFPD-GFYKGKLFVFDERFAL-AYNSSVVSECSYCGAPWDQY-KLCSTPQCRQL 439
Query: 303 VLVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDS 337
VL C C+ +G C C+ G +S P S+DS
Sbjct: 440 VLTCSACQGQGFTACCVTCQDKGGKQASGP-SQDS 473
|
Mus musculus (taxid: 10090) |
| >sp|A9NHA2|Y1123_ACHLI UPF0176 protein ACL_1123 OS=Acholeplasma laidlawii (strain PG-8A) GN=ACL_1123 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 8 QEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHI 67
Q+ Y VLLYYKY+ I + + + C LLGR+ ++ G+N T+ G E+++
Sbjct: 2 QKNYRVLLYYKYTAIENPEKFKDEHLAYCKSQDLLGRILVSSEGINGTLSGTFEQTENYM 61
Query: 68 DAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSN 127
D +KS+ FE FK+ D AH F+ + +R+ KELV S +NP +++
Sbjct: 62 DYLKSLQGFEDIFFKIDEVD-------AH--AFSKMHVRVKKELVNLSLEDDVNPLEIT- 111
Query: 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEI 187
G++L +EF+ LQ D V++DARN YE +G FR + PEI
Sbjct: 112 -GKYLEPIEFYQKLQ-------------DPNTVVIDARNDYEFDLGHFRG----AIKPEI 153
Query: 188 RQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRY- 246
+ F DLP WI N +Q + K +L YCTGG+RCE S ++ + GF QL+GGI Y
Sbjct: 154 KNFRDLPDWIRENKDQFKDKEILTYCTGGVRCEKFSGWLIKE--GFNVAGQLHGGIHNYG 211
Query: 247 LEQFPDGGFFKGKNFVFDHRISV 269
+ +G + GK +VFD RI+V
Sbjct: 212 TSKDTEGKLWDGKMYVFDERIAV 234
|
Acholeplasma laidlawii (strain PG-8A) (taxid: 441768) |
| >sp|Q4JXR5|Y240_CORJK UPF0176 protein jk0240 OS=Corynebacterium jeikeium (strain K411) GN=jk0240 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 162/310 (52%), Gaps = 31/310 (10%)
Query: 13 VLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKS 72
+LLYY ++ I D ++ + + C QL L GR+ ++ HG+N TVGG L+S + ++ +
Sbjct: 13 ILLYYCFTPIDDPTAVMLWQRALCEQLELKGRILISKHGINGTVGGSLASCKQYVRRTRE 72
Query: 73 ISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPD--VSNAGR 130
F+ +FK ++ F LS+++ +E+V F + L + V G
Sbjct: 73 FPGFKKMEFKWSAGSAD---------DFPRLSVKVREEIVAFGAPDELKVDENGVIGGGV 123
Query: 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF 190
HL E + +++ G ++V D RN E IGKF+ V P++R
Sbjct: 124 HLKPEEVNKLVEERGD-----------EVVFFDGRNAMEAEIGKFKNAIV----PDVRTT 168
Query: 191 SDLPTWIDNNA-EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249
D + I++ + L+ K V+ YCTGGIRCE+ S+ ++++ GFE V+Q+ GGI RY E+
Sbjct: 169 HDFISEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMKNR--GFEEVYQIDGGIVRYGEK 226
Query: 250 FPDGGFFKGKNFVFDHRISVG-SSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDT 308
+ D G ++G +VFD R+ + S DA +G C C + +D+ + C CR +L+C+
Sbjct: 227 YGDKGLWEGSLYVFDGRMHMEFSDDAATLGRCRACGHATNDFHN-CVNEQCREQILLCEE 285
Query: 309 CRMEGAQYVC 318
C + C
Sbjct: 286 CAADPESATC 295
|
Corynebacterium jeikeium (strain K411) (taxid: 306537) |
| >sp|Q4A0W6|Y127_STAS1 UPF0176 protein SSP0127 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0127 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 169/336 (50%), Gaps = 38/336 (11%)
Query: 11 YGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAV 70
Y VLLYYKY+TI D T + + C L L GR+ ++ G+N TV G + + + +++A+
Sbjct: 3 YRVLLYYKYTTIDDPELFATEHLAFCKDLELKGRILVSTEGINGTVSGTVEATDKYMEAL 62
Query: 71 KSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGR 130
K+ + F+G FK+ ++ H F + +R +E+V +NP +++ G
Sbjct: 63 KNDARFQGITFKVDEAE-------GH--AFKKMHVRPRQEIVALDLEDDVNPRELT--GN 111
Query: 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF 190
+LS EF L S DD V++DARN YE +G FR + P+I +F
Sbjct: 112 YLSPKEFREALLS-----------DD--TVVIDARNDYEYDLGHFRG----AVRPDITRF 154
Query: 191 SDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250
DLP WI N EQ K ++ YCTGGIRCE S Y+ + GFE+V QL GGI Y +
Sbjct: 155 RDLPDWIKENKEQFMDKKIVTYCTGGIRCEKFSGYLLKE--GFEDVSQLEGGIATYGKD- 211
Query: 251 PD--GGFFKGKNFVFDHRISVGSSDAD--IMGSCLLCSSSFDDYSSRCRCTHCRMLVLVC 306
P+ G F+ GK +VFD RISV + D ++G + + Y + C C +LV
Sbjct: 212 PETKGEFWDGKMYVFDERISVEVNHVDKTVVGKEWFDGTPCERYIN-CSNPECNKQILVS 270
Query: 307 DTCRMEGAQYVCELCRKH--GKSISSSPVSEDSKMK 340
+ C KH + + +S++ K K
Sbjct: 271 EENEARYLGACSHECAKHENNRYVKKHNISDEEKAK 306
|
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) |
| >sp|A8F9I7|Y205_BACP2 UPF0176 protein BPUM_0205 OS=Bacillus pumilus (strain SAFR-032) GN=BPUM_0205 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 145/264 (54%), Gaps = 33/264 (12%)
Query: 8 QEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHI 67
++QY VLLYY+Y I D + + + C +LGLLGR+ ++ G+N TV G + + ++
Sbjct: 2 EKQYRVLLYYQYVPIEDPETFTAEHLAFCKELGLLGRILISSEGINGTVSGTIEQTDKYM 61
Query: 68 DAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSN 127
+A+K F K+ +D H F + +R ELV S +NP +++
Sbjct: 62 EALKEDPRFASMPIKIDEAD-------GH--AFKKMHVRHRNELVNLSLEDDVNPLELT- 111
Query: 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEI 187
G+HLS VEF+ +QS V++DARN YE +G FR + P+I
Sbjct: 112 -GKHLSPVEFYEQMQSP-------------DTVVIDARNDYEFDVGHFRG----AVRPDI 153
Query: 188 RQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247
F +LP WI +N E L+GK +L YCTGG+RCE S +++ + GFE+V QL GGI Y
Sbjct: 154 ETFRELPEWIRDNKEILEGKKILTYCTGGVRCEKFSGWLKRE--GFEDVSQLDGGIVTYG 211
Query: 248 EQFPD--GGFFKGKNFVFDHRISV 269
+ P+ G + G+ +VFD R++V
Sbjct: 212 KD-PEVQGKLWDGQCYVFDTRLTV 234
|
Bacillus pumilus (strain SAFR-032) (taxid: 315750) |
| >sp|Q92BX1|Y1421_LISIN UPF0176 protein Lin1421 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin1421 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 34/330 (10%)
Query: 11 YGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAV 70
Y VLLYYKY+TI D + + + C ++ L GR+ +A G+N TV G + + ++D +
Sbjct: 4 YQVLLYYKYTTIDDPETFAKEHLAACKEMELKGRILVATEGINGTVSGTVEATNKYMDYM 63
Query: 71 KSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGR 130
+ + F FK+ ++D +H F + +R E+V+ S +NP +++ G
Sbjct: 64 ANDARFADMVFKIDAAD-------SH--AFKKMHVRPRAEIVSLSLEEDVNPLEIT--GD 112
Query: 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF 190
+L EF L D+ V+LDARN YE IG FR + P+I+ F
Sbjct: 113 YLEPAEFRDALL-------------DEDTVILDARNDYEFDIGHFRG----AVRPDIQNF 155
Query: 191 SDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRY-LEQ 249
+LP WI++N +QL+ K ++ YCTGGIRCE S ++++ AGFE+V QL+GGI Y +
Sbjct: 156 RELPGWIEDNRDQLEDKKIVTYCTGGIRCEKFSGWLKT--AGFEDVSQLHGGIATYGKNE 213
Query: 250 FPDGGFFKGKNFVFDHRISV--GSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCD 307
G + G+ +VFD RI+V + I+G + + Y + C +C +L
Sbjct: 214 ETKGELWDGQMYVFDERIAVPINQVNPTIVGKDYFDGTPCERYIN-CANPYCNKQILASL 272
Query: 308 TCRMEGAQYVCELCRKHGKSISSSPVSEDS 337
+ + CR H ++ + +S++
Sbjct: 273 ENEKKYLRSCSHECRVHPANLYTKELSKEE 302
|
Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626) |
| >sp|Q8Y7A4|Y1384_LISMO UPF0176 protein Lmo1384 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo1384 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 168/330 (50%), Gaps = 34/330 (10%)
Query: 11 YGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAV 70
Y VLLYYKY+TI D + + + C ++ L GR+ +A G+N TV G + + ++D +
Sbjct: 4 YQVLLYYKYTTIDDPETFAKEHLAACKEMELKGRILVATEGINGTVSGTVEATNKYMDYM 63
Query: 71 KSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGR 130
+ + F FK+ ++D AH F + +R E+V+ S +NP +V+ G
Sbjct: 64 ANDARFADMVFKIDAAD-------AH--AFKKMHVRPRAEIVSLSLEEDVNPLEVT--GT 112
Query: 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF 190
+L EF L D+ V+LDARN YE IG FR + P+I+ F
Sbjct: 113 YLEPSEFREALL-------------DEDTVILDARNDYEFDIGHFRG----AVRPDIQNF 155
Query: 191 SDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRY-LEQ 249
+LP WI++N EQL K ++ YCTGGIRCE S ++++ AGF++V QL+GGI Y +
Sbjct: 156 RELPGWIEDNREQLADKKIVTYCTGGIRCEKFSGWLKT--AGFDDVSQLHGGIATYGKNE 213
Query: 250 FPDGGFFKGKNFVFDHRISV--GSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCD 307
G + G+ +VFD RI+V + I+G + + Y + C +C +L
Sbjct: 214 ETKGELWDGQMYVFDERIAVPINQVNPTIVGKDYFDGTPCERYIN-CANPYCNKQILASV 272
Query: 308 TCRMEGAQYVCELCRKHGKSISSSPVSEDS 337
+ + CR H ++ + +S++
Sbjct: 273 ENEKKYLRSCSHDCRVHPANLYTKNLSKEE 302
|
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 608 | ||||||
| 296089796 | 613 | unnamed protein product [Vitis vinifera] | 0.993 | 0.985 | 0.731 | 0.0 | |
| 225450547 | 611 | PREDICTED: thiosulfate sulfurtransferase | 0.990 | 0.985 | 0.731 | 0.0 | |
| 147818270 | 634 | hypothetical protein VITISV_026716 [Viti | 0.993 | 0.952 | 0.700 | 0.0 | |
| 224124646 | 590 | predicted protein [Populus trichocarpa] | 0.924 | 0.952 | 0.719 | 0.0 | |
| 356574080 | 590 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.996 | 0.688 | 0.0 | |
| 356533533 | 633 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 0.932 | 0.642 | 0.0 | |
| 18391002 | 581 | uncharacterized protein [Arabidopsis tha | 0.927 | 0.970 | 0.674 | 0.0 | |
| 297849232 | 581 | hypothetical protein ARALYDRAFT_471018 [ | 0.927 | 0.970 | 0.678 | 0.0 | |
| 255542932 | 541 | Protein C9orf97, putative [Ricinus commu | 0.863 | 0.970 | 0.648 | 0.0 | |
| 326497653 | 621 | predicted protein [Hordeum vulgare subsp | 0.976 | 0.956 | 0.603 | 0.0 |
| >gi|296089796|emb|CBI39615.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/614 (73%), Positives = 519/614 (84%), Gaps = 10/614 (1%)
Query: 3 GDNQSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSS 62
DN +QYGV+LYYKY+ IPD++ LF+FY+SNC+ LGLLGRVRLAP GVNVT+GGKLS
Sbjct: 2 ADNDGPDQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSL 61
Query: 63 LESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNP 122
LE HI AVKS SLFEGTDFKLAS +PLN +VA ECGFTSLSIR+VKELVTFS HPLL
Sbjct: 62 LEKHIAAVKSNSLFEGTDFKLASCHHPLNDQVAKECGFTSLSIRVVKELVTFSPHPLLKS 121
Query: 123 PDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVET 182
P++SNAG HLSAVEFHS+LQS G +L+KEN ++ KKLVLLDARNLYETRIGKF+TP+VET
Sbjct: 122 PEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETRIGKFKTPNVET 181
Query: 183 LDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGG 242
LDP IRQ+SDLP+WID+N+E+ +G VLMYCTGGIRCEMASAY+RSKGAGFENVFQL+GG
Sbjct: 182 LDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGAGFENVFQLFGG 241
Query: 243 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRML 302
IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDA+IMG+CLLC SSFDDYSSRCRC HCRML
Sbjct: 242 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYSSRCRCNHCRML 301
Query: 303 VLVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNV-SSESTVSPQM 361
VLVCD+C+ + A YVCELC+KHGK S P+ E+ + +V + I+LK V S ++T+SPQ+
Sbjct: 302 VLVCDSCQKKDALYVCELCQKHGKGYGSIPLIENDESQVITQPIKLKTVPSDDTTLSPQI 361
Query: 362 PWRNGIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQ-- 419
R+G RKLRILCLHGFRQNAS FKGRTASL KKLK+IAE VF+DAPHELPFIYQ
Sbjct: 362 HSRHGSKPSRKLRILCLHGFRQNASGFKGRTASLVKKLKSIAELVFVDAPHELPFIYQPC 421
Query: 420 -----TSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQT 474
+ ++SS+ Q PPP NC+K+FAW V+PDFSG E+NWK ADG FDP QYQQQT
Sbjct: 422 LQEPNSKDLSSLSQQSPPP--ANCRKKFAWLVSPDFSGASESNWKKADGQFDPLQYQQQT 479
Query: 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534
DG DVSLAYLKT+FSQ GPFDGI+GFSQGAAMAA+V A+ R GE+DFRF ILCSGFAL
Sbjct: 480 DGFDVSLAYLKTVFSQAGPFDGIMGFSQGAAMAAAVSARRGRPGGEMDFRFVILCSGFAL 539
Query: 535 HSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS 594
+ + SINCPSLHIFG + GNDRQ+ANQAS++LA +FEEGCSVIIEHD GH+IPTRS
Sbjct: 540 NLPDSVGGSINCPSLHIFGNEQGNDRQIANQASRDLAASFEEGCSVIIEHDSGHMIPTRS 599
Query: 595 PYIDEIKSFLQRFL 608
PYIDEI+ FL RFL
Sbjct: 600 PYIDEIRDFLHRFL 613
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225450547|ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/614 (73%), Positives = 518/614 (84%), Gaps = 12/614 (1%)
Query: 3 GDNQSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSS 62
DN +QYGV+LYYKY+ IPD++ LF+FY+SNC+ LGLLGRVRLAP GVNVT+GGKLS
Sbjct: 2 ADNDGPDQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSL 61
Query: 63 LESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNP 122
LE HI AVKS SLFEGTDFKLAS +PLN +VA ECGFTSLSIR+VKELVTFS HPLL
Sbjct: 62 LEKHIAAVKSNSLFEGTDFKLASCHHPLNDQVAKECGFTSLSIRVVKELVTFSPHPLLKS 121
Query: 123 PDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVET 182
P++SNAG HLSAVEFHS+LQS G +L+KEN ++ KKLVLLDARNLYETRIGKF+TP+VET
Sbjct: 122 PEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETRIGKFKTPNVET 181
Query: 183 LDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGG 242
LDP IRQ+SDLP+WID+N+E+ +G VLMYCTGGIRCEMASAY+RSKGAGFENVFQL+GG
Sbjct: 182 LDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGAGFENVFQLFGG 241
Query: 243 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRML 302
IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDA+IMG+CLLC SSFDDYSSRCRC HCRML
Sbjct: 242 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYSSRCRCNHCRML 301
Query: 303 VLVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNV-SSESTVSPQM 361
VLVCD+C + A YVCELC+KHGK S P+ E+ + +V + I+LK V S ++T+SPQ+
Sbjct: 302 VLVCDSC--QDALYVCELCQKHGKGYGSIPLIENDESQVITQPIKLKTVPSDDTTLSPQI 359
Query: 362 PWRNGIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQ-- 419
R+G RKLRILCLHGFRQNAS FKGRTASL KKLK+IAE VF+DAPHELPFIYQ
Sbjct: 360 HSRHGSKPSRKLRILCLHGFRQNASGFKGRTASLVKKLKSIAELVFVDAPHELPFIYQPC 419
Query: 420 -----TSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQT 474
+ ++SS+ Q PPP NC+K+FAW V+PDFSG E+NWK ADG FDP QYQQQT
Sbjct: 420 LQEPNSKDLSSLSQQSPPP--ANCRKKFAWLVSPDFSGASESNWKKADGQFDPLQYQQQT 477
Query: 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534
DG DVSLAYLKT+FSQ GPFDGI+GFSQGAAMAA+V A+ R GE+DFRF ILCSGFAL
Sbjct: 478 DGFDVSLAYLKTVFSQAGPFDGIMGFSQGAAMAAAVSARRGRPGGEMDFRFVILCSGFAL 537
Query: 535 HSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS 594
+ + SINCPSLHIFG + GNDRQ+ANQAS++LA +FEEGCSVIIEHD GH+IPTRS
Sbjct: 538 NLPDSVGGSINCPSLHIFGNEQGNDRQIANQASRDLAASFEEGCSVIIEHDSGHMIPTRS 597
Query: 595 PYIDEIKSFLQRFL 608
PYIDEI+ FL RFL
Sbjct: 598 PYIDEIRDFLHRFL 611
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147818270|emb|CAN64715.1| hypothetical protein VITISV_026716 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/635 (70%), Positives = 520/635 (81%), Gaps = 31/635 (4%)
Query: 3 GDNQSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSS 62
DN +QYGV+LYYKY+ IPD++ LF+FY+SNC+ LGLLGRVRLAP GVNVT+GGKLS
Sbjct: 2 ADNDGPDQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSL 61
Query: 63 LESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNP 122
LE HI AVKS SLFEGTDFKLAS +PLN +VA ECGFTSLSIR+VKELVTFS HPLL
Sbjct: 62 LEKHIAAVKSNSLFEGTDFKLASCHHPLNDQVAKECGFTSLSIRVVKELVTFSPHPLLKS 121
Query: 123 PDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVET 182
P++SNAG HLSAVEFHS+LQS G +L+KEN ++ KKLVLLDARNLYETRIGKF+TP+VET
Sbjct: 122 PEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETRIGKFKTPNVET 181
Query: 183 LDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGG 242
LDP IRQ+SDLP+WID+N+E+ +G VLMYCTGGIRCEMASAY+RSKGAGFENVFQL+GG
Sbjct: 182 LDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGAGFENVFQLFGG 241
Query: 243 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRML 302
IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDA+IMG+CLLC SSFDDYSSRCRC CRML
Sbjct: 242 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYSSRCRCNRCRML 301
Query: 303 VLVCDTCRM-EGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNV-SSESTVSPQ 360
VLVCD+C+ + A YVCELC+KHGK S P+ E+ + +V + I+LK V S ++T+SPQ
Sbjct: 302 VLVCDSCQQKKDALYVCELCQKHGKGYGSIPLIENDESQVITQPIKLKTVPSGDTTLSPQ 361
Query: 361 MPWRNG----IVCR----------------RKLRILCLHGFRQNASSFKGRTASLAKKLK 400
+ R+G ++ + R+LRILCLHGFRQNAS FKGRTASL KKLK
Sbjct: 362 IHSRHGKYQIMLSKSQFLFDKHYDTGSNPSRRLRILCLHGFRQNASGFKGRTASLVKKLK 421
Query: 401 NIAEFVFIDAPHELPFIYQ-------TSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGK 453
++AE VF+DAPHELPFIYQ + ++SS+ Q PPP NC+K+FAW V+PDFSG
Sbjct: 422 SLAELVFVDAPHELPFIYQPCLQEPNSKDLSSLSQQSPPP--ANCRKKFAWLVSPDFSGA 479
Query: 454 RETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQ 513
E+NWK ADG FDP QYQQQTDG DVSLAYLKT+FSQ GPFDGI+GFSQGAAMAA+V A+
Sbjct: 480 SESNWKKADGQFDPLQYQQQTDGFDVSLAYLKTVFSQAGPFDGIMGFSQGAAMAAAVSAR 539
Query: 514 WERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573
R GE+DFRF ILCSGF L+ + SINCPSLHIFG + GNDRQ+ANQAS++LA +
Sbjct: 540 RGRPGGEMDFRFVILCSGFTLNLPDSVGGSINCPSLHIFGNEQGNDRQIANQASRDLAAS 599
Query: 574 FEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
FEEGCSVIIEHD GH+IPTRSPYIDEI+ FL RFL
Sbjct: 600 FEEGCSVIIEHDSGHMIPTRSPYIDEIRDFLHRFL 634
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124646|ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|222871500|gb|EEF08631.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/605 (71%), Positives = 485/605 (80%), Gaps = 43/605 (7%)
Query: 11 YGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAV 70
YGVLLYYKY+ IPDLNSL +FY SNC+ L LLGRVRL+ HGVNVTVGGKLSSLE HI+AV
Sbjct: 22 YGVLLYYKYTEIPDLNSLLSFYNSNCTSLSLLGRVRLSLHGVNVTVGGKLSSLEKHIEAV 81
Query: 71 KSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGR 130
K+ISLFEGTDFKLAS +PLN KVAHECGFTSLSIRIVKELVTFS +PL+ PDVSNAGR
Sbjct: 82 KAISLFEGTDFKLASCHFPLNDKVAHECGFTSLSIRIVKELVTFSPYPLVKAPDVSNAGR 141
Query: 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF 190
HLSAVEFHS LQS G + DDK LVLLDARNLYETRIGKF P+V+TLDP IRQ+
Sbjct: 142 HLSAVEFHSALQSAGDL------ADDKGLVLLDARNLYETRIGKFDMPNVDTLDPGIRQY 195
Query: 191 SDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250
SDLP+WID+N+EQL+GK+VLMYCTGGIRCEMASAY+RSKGAGFENVFQL+GGIQRYLEQF
Sbjct: 196 SDLPSWIDDNSEQLRGKNVLMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQF 255
Query: 251 PDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCR 310
PDGGFFKGKNFVFDHRISV SSD +I+G+CLLC SFDDYSSRCRC++CRMLVLVCD+CR
Sbjct: 256 PDGGFFKGKNFVFDHRISVXSSDTNILGTCLLCGLSFDDYSSRCRCSYCRMLVLVCDSCR 315
Query: 311 MEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNVSSESTVSPQMPWRNGIVCR 370
E A Y CELC+KHGK I S NV+ P
Sbjct: 316 KEEAVYACELCQKHGKVIES-------------------NVAENGARPP----------- 345
Query: 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQT-------SNV 423
RKLRILCLHGFRQNAS FKGRTASLAKKLKNIAE VF+DAPHELPFIYQ+ S+
Sbjct: 346 RKLRILCLHGFRQNASGFKGRTASLAKKLKNIAELVFVDAPHELPFIYQSCVSELECSDE 405
Query: 424 SSVIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAY 483
SS PP+E C+ +FAW +APD G+ T+WK AD PFDP QY QQT+G DVSL+Y
Sbjct: 406 SSFSSQQILPPTETCRGKFAWLIAPDCKGRSATDWKKADSPFDPLQYLQQTEGFDVSLSY 465
Query: 484 LKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRS 543
LKT+FS++GPFDGILGFSQGAAMAA +CAQ RLKG+IDFRFAILCSGFAL E E S
Sbjct: 466 LKTVFSRDGPFDGILGFSQGAAMAALLCAQKGRLKGDIDFRFAILCSGFALPFVEIESGS 525
Query: 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSF 603
INCPSLH+FG G DRQ+AN+ S+ELA FE+GCSVIIEHD GHIIPTR+PYIDEIK F
Sbjct: 526 INCPSLHVFGCVPGKDRQIANKTSRELASLFEDGCSVIIEHDFGHIIPTRTPYIDEIKGF 585
Query: 604 LQRFL 608
LQRFL
Sbjct: 586 LQRFL 590
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574080|ref|XP_003555180.1| PREDICTED: uncharacterized protein LOC100786152 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/603 (68%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 7 SQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESH 66
S+E YGVLLYYKY+ IP+L+ L TFY SNCS L LLGRVRL+ GVNVTVGG LSSLE H
Sbjct: 2 SEEMYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSSRGVNVTVGGNLSSLEIH 61
Query: 67 IDAVKSI-SLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
I+A+K+ SLF TDFKLA+ PLN KVA ECGFTSLSIRIV ELVT SSHPLL PD+
Sbjct: 62 IEALKAYNSLFHDTDFKLANCHQPLNDKVAQECGFTSLSIRIVDELVTLSSHPLLKSPDI 121
Query: 126 SNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP 185
SNAG+HLSA++FHS L +T ++E+ +D LVLLDARNLYETRIGKF P++ETLDP
Sbjct: 122 SNAGKHLSALDFHSSLHNT----NRESPEND--LVLLDARNLYETRIGKFHVPNIETLDP 175
Query: 186 EIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQR 245
++RQ+SDL +WID+N E+L+GK++LMYCTGGIRCEMASAY+RSKGAGFENVFQL+GGIQR
Sbjct: 176 QVRQYSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQR 235
Query: 246 YLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLV 305
YLEQFPDGGFFKGKNFVFDHRISVGSSDA+++G+CL+C SFDDYSSRCRC +CRMLVLV
Sbjct: 236 YLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCAYCRMLVLV 295
Query: 306 CDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNVSSESTVSPQMPWRN 365
C +C+ E QYVCELC+K GK + S+ + E+ + K + P E +N SS++ PQ+P +
Sbjct: 296 CGSCQNESTQYVCELCQKQGKVVRSTQLIENGESKSSLPGAEFQNFSSDTMCLPQVPRGD 355
Query: 366 GIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSS 425
RKLRILCLHGFRQNASSFKGRTASLAKKLK +AEFVFI+APHELPFIYQ
Sbjct: 356 DPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMAEFVFINAPHELPFIYQIPV--- 412
Query: 426 VIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK 485
PPPP ENCKK+FAWF+AP+F G +WK+ADGPFD QYQQQTDG D+S+++LK
Sbjct: 413 -----PPPPLENCKKKFAWFLAPNFDGSSGVDWKVADGPFDALQYQQQTDGYDISVSHLK 467
Query: 486 TIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSIN 545
+FSQ+GPFDGILGFSQGAAMAA + AQ E+LKGE+DF+F +LCSGFAL E E I
Sbjct: 468 NVFSQQGPFDGILGFSQGAAMAALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECGPIK 527
Query: 546 CPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605
CPSLHIFG + G DRQ+ANQASKEL ++ CS I+EHDCGHIIPTRSPYID IK FL
Sbjct: 528 CPSLHIFGNEHGKDRQIANQASKELVSLYDSDCSGIVEHDCGHIIPTRSPYIDGIKDFLG 587
Query: 606 RFL 608
RFL
Sbjct: 588 RFL 590
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533533|ref|XP_003535318.1| PREDICTED: uncharacterized protein LOC100799148 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/644 (64%), Positives = 492/644 (76%), Gaps = 54/644 (8%)
Query: 7 SQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESH 66
S+++YGVLLYYKY+ IP+L+ L TFY SNCS L LLGRVRL+ HGVNVTVGG LSSL +H
Sbjct: 2 SEDKYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSSHGVNVTVGGNLSSLGNH 61
Query: 67 IDAVKSIS-LFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
I A+K+ S LF TDFKLA+ +PLN KVA ECGFTSLSIRIV ELVT SSHPLL P++
Sbjct: 62 IQALKAYSTLFHHTDFKLATCHHPLNDKVAQECGFTSLSIRIVHELVTLSSHPLLKSPNI 121
Query: 126 SNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP 185
SNAG+HLS++ + + + +K LVLLDARNLYETRIGKF P+VETLDP
Sbjct: 122 SNAGKHLSSLH------------NTNSESPEKGLVLLDARNLYETRIGKFDVPNVETLDP 169
Query: 186 EIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQR 245
++RQFSDL +WID+N E+L+GK++LMYCTGGIRCEMASAY+RSKGAGFENVFQL+GGIQR
Sbjct: 170 QVRQFSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQR 229
Query: 246 YLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLV 305
YLEQFPDGGFFKGKNFVFDHRISVGSSDA+++G+CL+C SFDDYSSRCRC +CRMLVLV
Sbjct: 230 YLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCAYCRMLVLV 289
Query: 306 CDTCRM----------------------------------EGAQYVCELCRKHGKSISSS 331
C +C+ E QYVCELC+K GK++ S+
Sbjct: 290 CGSCQSIGLKIGFQACSHLNNICPKAMGPITWINYISELNESTQYVCELCQKQGKAVRST 349
Query: 332 PVSEDSKMKVTSPQIELKNVSSESTVS-PQMPWRNGIVCRRKLRILCLHGFRQNASSFKG 390
+ E+ + K + P +E +N SS++T+ PQ+P + RKLRILCLHGFRQNASSFKG
Sbjct: 350 QLIENGESKTSLPGVEFQNFSSDTTMCLPQVPRGDDPRTSRKLRILCLHGFRQNASSFKG 409
Query: 391 RTASLAKKLKNIAEFVFIDAPHELPFIYQTS------NVSSVIQNGPPPPSENCKKRFAW 444
RTASLAKKLK + EFVFIDAPHELPFIYQT N +S PPPP +NCKK+FAW
Sbjct: 410 RTASLAKKLKKMTEFVFIDAPHELPFIYQTPMPELNVNCASSSPPSPPPPLDNCKKKFAW 469
Query: 445 FVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGA 504
FVAP+F G +WK+ADGPFDP QYQQQT+G D+S+++LK +FSQEGPFDGILGFSQGA
Sbjct: 470 FVAPNFDGSSAADWKVADGPFDPLQYQQQTNGYDISVSHLKNVFSQEGPFDGILGFSQGA 529
Query: 505 AMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVAN 564
AM A + AQ E+LKGE+DF+F +LCSGFAL E E I CPSLHIFG + G DRQ+AN
Sbjct: 530 AMTALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECGPIKCPSLHIFGNEHGKDRQIAN 589
Query: 565 QASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
QASKELA ++ CS I+EHDCGHIIPTRSPYIDEIK FL RFL
Sbjct: 590 QASKELASLYDSDCSAIVEHDCGHIIPTRSPYIDEIKDFLGRFL 633
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18391002|ref|NP_563840.1| uncharacterized protein [Arabidopsis thaliana] gi|75164945|sp|Q94AC1.1|STR6_ARATH RecName: Full=Rhodanese-like domain-containing protein 6; AltName: Full=Sulfurtransferase 6; Short=AtStr6 gi|15081791|gb|AAK82550.1| At1g09280/T12M4_1 [Arabidopsis thaliana] gi|133778874|gb|ABO38777.1| At1g09280 [Arabidopsis thaliana] gi|332190303|gb|AEE28424.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/606 (67%), Positives = 470/606 (77%), Gaps = 42/606 (6%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
+ +EQYGVLLYYKY+++PDL+ L +FYES+C+ LGLLGRVRL+P GVNVTVGGKL++LE
Sbjct: 15 EDEEQYGVLLYYKYTSVPDLDELVSFYESSCNSLGLLGRVRLSPKGVNVTVGGKLTALEE 74
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
HI A KS LFEGTDFKLAS +PLN KVA ECGFTSLSIR+V+ELVTFS P L PP++
Sbjct: 75 HIAAAKSNCLFEGTDFKLASCHHPLNDKVAEECGFTSLSIRVVEELVTFSPCPPLKPPEI 134
Query: 126 SNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP 185
SNAG+HLSA EFHS+LQS +++K+LVLLDARNLYETRIGKF + +VETLDP
Sbjct: 135 SNAGKHLSAAEFHSVLQSAN------GKSENKELVLLDARNLYETRIGKFESENVETLDP 188
Query: 186 EIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQR 245
EIRQ+SDLPTWID NAE+++GK+VLMYCTGGIRCEMASAY+RSKGAGFEN FQLYGGIQR
Sbjct: 189 EIRQYSDLPTWIDQNAEKMKGKNVLMYCTGGIRCEMASAYIRSKGAGFENTFQLYGGIQR 248
Query: 246 YLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLV 305
YLEQFP GGFFKGKNFVFDHRISVGSS DI+GSCLLC+++FDDYS RCRC CRMLVLV
Sbjct: 249 YLEQFPSGGFFKGKNFVFDHRISVGSSKEDIIGSCLLCNNTFDDYSPRCRCRLCRMLVLV 308
Query: 306 CDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNVSSESTVSPQMPWRN 365
C+ CR++G Y+CELCRKHGK P+S D N SES N
Sbjct: 309 CNHCRVKGDIYICELCRKHGK--GEVPLSLDP-----------LNQPSES---------N 346
Query: 366 GIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSS 425
G RRKLRILCLHGFRQNASSFKGRT SLAKKLKNIAE VFIDAPHEL FIYQT+
Sbjct: 347 GDNTRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTAT--- 403
Query: 426 VIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK 485
PPS C K+FAW V+ DF ET W +A FDP QYQ QT+G D SL YLK
Sbjct: 404 -------PPSGVCNKKFAWLVSSDFDKPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLK 456
Query: 486 TIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA---LHSAEFEHR 542
T F ++GPFDGILGFSQGAAMAA+VC + E+L GEIDFRF +LCSGF L + E R
Sbjct: 457 TAFEEKGPFDGILGFSQGAAMAAAVCGKQEQLVGEIDFRFCVLCSGFTPWPLLEMK-EKR 515
Query: 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKS 602
SI CPSLHIFG G DRQ+ QAS +LA FE+GC+ I+EHD GHIIPT+SPYIDEIK+
Sbjct: 516 SIKCPSLHIFGSQPGKDRQIVTQASSDLAGLFEDGCATIVEHDFGHIIPTKSPYIDEIKA 575
Query: 603 FLQRFL 608
FL +F+
Sbjct: 576 FLYQFI 581
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297849232|ref|XP_002892497.1| hypothetical protein ARALYDRAFT_471018 [Arabidopsis lyrata subsp. lyrata] gi|297338339|gb|EFH68756.1| hypothetical protein ARALYDRAFT_471018 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/606 (67%), Positives = 469/606 (77%), Gaps = 42/606 (6%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
+ +EQYGVLLYYKY+++PDL+ L +FYES+C+ LGLLGRVRL+P GVNVTVGGKL++LE
Sbjct: 15 EDEEQYGVLLYYKYTSVPDLDELVSFYESSCNSLGLLGRVRLSPKGVNVTVGGKLTALEE 74
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
HI A KS LFEGTDFKLAS +PLN KVA ECGFTSLSIR+V+ELVTFS P L PP++
Sbjct: 75 HIAAAKSNCLFEGTDFKLASCHHPLNDKVAEECGFTSLSIRVVEELVTFSPCPPLKPPEI 134
Query: 126 SNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP 185
SNAG+HLSA EFHS+LQS +++K LVLLDARNLYETRIGKF + +VETLDP
Sbjct: 135 SNAGKHLSAAEFHSVLQSA------NGKSENKDLVLLDARNLYETRIGKFESDNVETLDP 188
Query: 186 EIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQR 245
EIRQ+SDLPTWID NAE+L+GK+VLMYCTGGIRCEMASAY+RSKGAGFEN FQLYGGIQR
Sbjct: 189 EIRQYSDLPTWIDQNAEKLKGKNVLMYCTGGIRCEMASAYIRSKGAGFENTFQLYGGIQR 248
Query: 246 YLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLV 305
YLEQFP GGFFKGKNFVFDHRISVGSS DI+GSCLLC+++FDDYS RCRC CRMLVLV
Sbjct: 249 YLEQFPSGGFFKGKNFVFDHRISVGSSKGDIIGSCLLCNNTFDDYSPRCRCKLCRMLVLV 308
Query: 306 CDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNVSSESTVSPQMPWRN 365
C+ CR++G VCELCRKHGK S P+S D N SES N
Sbjct: 309 CNHCRVKGDICVCELCRKHGK--SEVPLSLDP-----------SNQPSES---------N 346
Query: 366 GIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSS 425
G RRKLRILCLHGFRQNASSFKGRT SLAKKLKNIAE VFIDAPHEL FIYQT+
Sbjct: 347 GDNIRRKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTAT--- 403
Query: 426 VIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK 485
PPS C K+FAW V+ DF ET W +A FDP QYQ QT+G D SL YLK
Sbjct: 404 -------PPSGACNKKFAWLVSSDFDQPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLK 456
Query: 486 TIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA---LHSAEFEHR 542
T+F+++GPFDGILGFSQGAAMAA+VC + E+L GEIDFRF +LCSGF L E E
Sbjct: 457 TVFAEKGPFDGILGFSQGAAMAAAVCGKQEQLVGEIDFRFCVLCSGFTPWPLLEKE-EKG 515
Query: 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKS 602
SI CPSLHIFG G DRQ+ QAS +LA F++GC+ IIEHD GHIIPT+SPYIDEIK
Sbjct: 516 SITCPSLHIFGSQPGKDRQIVTQASSDLAGLFDDGCATIIEHDFGHIIPTKSPYIDEIKV 575
Query: 603 FLQRFL 608
FL +F+
Sbjct: 576 FLYQFI 581
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542932|ref|XP_002512529.1| Protein C9orf97, putative [Ricinus communis] gi|223548490|gb|EEF49981.1| Protein C9orf97, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/612 (64%), Positives = 445/612 (72%), Gaps = 87/612 (14%)
Query: 3 GDNQSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSS 62
GDN QYGVLLYYKY+ IPDLNSL +FY SNC+ L LLGRVRL+ GVNVTVGG LSS
Sbjct: 11 GDNH---QYGVLLYYKYTLIPDLNSLLSFYNSNCTSLSLLGRVRLSSRGVNVTVGGLLSS 67
Query: 63 LESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNP 122
L+ HI AV+ + LFEGTDFKLA+S YPLN KVA ECGFTSLSIRIVKELVTFSS+PLL
Sbjct: 68 LKKHIAAVELLKLFEGTDFKLAASHYPLNDKVARECGFTSLSIRIVKELVTFSSYPLLKQ 127
Query: 123 PDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVET 182
PDVSNAG+HLSA EFHS L+S GQ +E + ++ LVLLDARNLYETRIGKF PSVET
Sbjct: 128 PDVSNAGKHLSAFEFHSALKSAGQ---REGSKSNEGLVLLDARNLYETRIGKFHVPSVET 184
Query: 183 LDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGG 242
LDPEIRQ+SDLP+WID+N+EQL+GK VLMYCTGGIRCEMASAY++SKGAGFEN+FQL+GG
Sbjct: 185 LDPEIRQYSDLPSWIDDNSEQLRGKQVLMYCTGGIRCEMASAYIKSKGAGFENIFQLFGG 244
Query: 243 IQRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRML 302
IQRYLEQFPDGG FKGKNFVFDHRISV SSD +I+G CL C SFDDYSSRCRC++CRML
Sbjct: 245 IQRYLEQFPDGGHFKGKNFVFDHRISVASSDTNILGMCLTCGMSFDDYSSRCRCSYCRML 304
Query: 303 VLVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSKMKVTSPQIELKNVSSESTVSPQMP 362
VLVCD C+M+ A YVCELC+KHGK++ S P++E+ + + T P EST SP
Sbjct: 305 VLVCDGCQMKEAVYVCELCQKHGKAVGSVPLTENGQPEETMP---------ESTGSP--- 352
Query: 363 WRNGIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIY---- 418
RKLRILCLHGFRQNAS FKGRTASLAKKLKNIAE VFIDAPHELPFIY
Sbjct: 353 --------RKLRILCLHGFRQNASGFKGRTASLAKKLKNIAELVFIDAPHELPFIYQPHV 404
Query: 419 --QTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDG 476
Q N +S PP ENC+K+FAW +A DF G ET WK+AD
Sbjct: 405 TEQQDNKASFPSQQILPPKENCRKKFAWLIATDFKGSSETEWKVAD-------------- 450
Query: 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536
GFSQGAA+AASVCA RLK
Sbjct: 451 ----------------------GFSQGAAIAASVCALDRRLK------------------ 470
Query: 537 AEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPY 596
E E SINCPSLHIFG G DRQ+ANQAS+ELA FEEG SVII HDCGHIIPTR P+
Sbjct: 471 -EIEPGSINCPSLHIFGSTSGKDRQIANQASRELASLFEEGSSVIINHDCGHIIPTRPPF 529
Query: 597 IDEIKSFLQRFL 608
ID+IK FLQRFL
Sbjct: 530 IDQIKGFLQRFL 541
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326497653|dbj|BAK05916.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/598 (60%), Positives = 440/598 (73%), Gaps = 4/598 (0%)
Query: 13 VLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKS 72
VLLYYKY+ +PD +L FYES C L L+GRVR+ P GVN T+GG++++LE HI + S
Sbjct: 26 VLLYYKYAEVPDAPALAAFYESRCRALALVGRVRVGPDGVNATLGGRMAALEKHIKEMSS 85
Query: 73 ISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHL 132
SLF+G DFKLAS + P++ +VA ECGFTSLS+R+VKELVT S+P L PD+ AGRHL
Sbjct: 86 NSLFDGADFKLASCEDPVDDRVARECGFTSLSVRLVKELVTLCSNPSLTTPDIKFAGRHL 145
Query: 133 SAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD 192
SA EFHS+LQS G LD E +V+LDARNLYETRIGKF P+VETL PEIRQ+SD
Sbjct: 146 SAAEFHSVLQSVGTCLDTEAPAGQNDVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSD 205
Query: 193 LPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252
LP WID + E+L+GK ++MYCTGGIRCEMASAY+RSKG GFENVFQLYGGIQRYLEQ+PD
Sbjct: 206 LPLWIDEHTEKLRGKSIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQYPD 265
Query: 253 GGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRME 312
GG+F GKNFVFDHRISVG +I+G+CL+C S++DDYSSRCRC+HCRMLVLVC TC+
Sbjct: 266 GGYFDGKNFVFDHRISVGRIKDNILGTCLICGSTYDDYSSRCRCSHCRMLVLVCSTCQDS 325
Query: 313 GAQYVCELCRKHGKSISSSPVSED--SKMKVTSPQIELKNVSSESTVSPQMPWRNGIVCR 370
+YVCELC K+GK V +D +K +++ P K S S + P NG
Sbjct: 326 TKEYVCELCLKNGKQCCEISVKQDCQTKSELSEPSDIGKLSISNKISSFKAPGSNGSEQL 385
Query: 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNG 430
+KLRILCLHGFRQN+S+FKGRT+SLAKKLK+IAE VFIDAPHEL F+YQ V +
Sbjct: 386 KKLRILCLHGFRQNSSNFKGRTSSLAKKLKHIAELVFIDAPHELSFVYQPH--PDVYSDK 443
Query: 431 PPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ 490
P PPS K +FAW V+P S +WK+AD PFDP QYQ+QTDG S AYL +I +Q
Sbjct: 444 PSPPSATAKTKFAWLVSPKMSCHSMQDWKVADAPFDPLQYQEQTDGFKESYAYLDSIIAQ 503
Query: 491 EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLH 550
+G FDG+LGFSQGAAMAA +C Q ++ G FRF I CSG+ +F+ I PSLH
Sbjct: 504 DGNFDGVLGFSQGAAMAALLCRQQQKTCGSPKFRFGIFCSGYPAPVGDFDSEPIRLPSLH 563
Query: 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
FGG G+DRQ+A++AS ELA FEEG I+EHD GHIIPTR PYID++K FL F+
Sbjct: 564 CFGGGEGHDRQIASRASTELAGMFEEGRCTIVEHDMGHIIPTRPPYIDQMKEFLCNFI 621
|
Source: Hordeum vulgare subsp. vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 608 | ||||||
| TAIR|locus:2195286 | 581 | AT1G09280 "AT1G09280" [Arabido | 0.537 | 0.562 | 0.723 | 3e-216 | |
| RGD|1310893 | 493 | Tstd2 "thiosulfate sulfurtrans | 0.513 | 0.632 | 0.388 | 2.6e-54 | |
| UNIPROTKB|Q5T7W7 | 516 | TSTD2 "Thiosulfate sulfurtrans | 0.513 | 0.604 | 0.379 | 2.4e-53 | |
| MGI|MGI:3039624 | 495 | Tstd2 "thiosulfate sulfurtrans | 0.509 | 0.626 | 0.377 | 6.3e-53 | |
| UNIPROTKB|P67330 | 328 | SP_0095 "UPF0176 protein SP_00 | 0.294 | 0.545 | 0.340 | 1.1e-30 | |
| UNIPROTKB|Q5LWN8 | 301 | SPO0091 "UPF0176 protein SPO00 | 0.179 | 0.362 | 0.457 | 7.6e-29 | |
| TIGR_CMR|SPO_0091 | 301 | SPO_0091 "rhodanese-like domai | 0.179 | 0.362 | 0.457 | 7.6e-29 | |
| UNIPROTKB|Q8WZ82 | 227 | OVCA2 "Ovarian cancer-associat | 0.361 | 0.969 | 0.345 | 2.4e-24 | |
| RGD|1564623 | 227 | Ovca2 "ovarian tumor suppresso | 0.358 | 0.960 | 0.350 | 5.1e-24 | |
| WB|WBGene00007730 | 221 | C25G4.2 [Caenorhabditis elegan | 0.226 | 0.624 | 0.337 | 2.9e-23 |
| TAIR|locus:2195286 AT1G09280 "AT1G09280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1300 (462.7 bits), Expect = 3.0e-216, Sum P(2) = 3.0e-216
Identities = 243/336 (72%), Positives = 287/336 (85%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
+ +EQYGVLLYYKY+++PDL+ L +FYES+C+ LGLLGRVRL+P GVNVTVGGKL++LE
Sbjct: 15 EDEEQYGVLLYYKYTSVPDLDELVSFYESSCNSLGLLGRVRLSPKGVNVTVGGKLTALEE 74
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
HI A KS LFEGTDFKLAS +PLN KVA ECGFTSLSIR+V+ELVTFS P L PP++
Sbjct: 75 HIAAAKSNCLFEGTDFKLASCHHPLNDKVAEECGFTSLSIRVVEELVTFSPCPPLKPPEI 134
Query: 126 SNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP 185
SNAG+HLSA EFHS+LQS +++K+LVLLDARNLYETRIGKF + +VETLDP
Sbjct: 135 SNAGKHLSAAEFHSVLQSAN------GKSENKELVLLDARNLYETRIGKFESENVETLDP 188
Query: 186 EIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQR 245
EIRQ+SDLPTWID NAE+++GK+VLMYCTGGIRCEMASAY+RSKGAGFEN FQLYGGIQR
Sbjct: 189 EIRQYSDLPTWIDQNAEKMKGKNVLMYCTGGIRCEMASAYIRSKGAGFENTFQLYGGIQR 248
Query: 246 YLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLV 305
YLEQFP GGFFKGKNFVFDHRISVGSS DI+GSCLLC+++FDDYS RCRC CRMLVLV
Sbjct: 249 YLEQFPSGGFFKGKNFVFDHRISVGSSKEDIIGSCLLCNNTFDDYSPRCRCRLCRMLVLV 308
Query: 306 CDTCRMEGAQYVCELCRKHGKS---ISSSPVSEDSK 338
C+ CR++G Y+CELCRKHGK +S P+++ S+
Sbjct: 309 CNHCRVKGDIYICELCRKHGKGEVPLSLDPLNQPSE 344
|
|
| RGD|1310893 Tstd2 "thiosulfate sulfurtransferase (rhodanese)-like domain containing 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 130/335 (38%), Positives = 190/335 (56%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
Q E+ VLLYY Y + D + + + + C L L G++R+A G+N TVGG +
Sbjct: 162 QGNEEGEVLLYYCYCDLEDPDWVCAWQAALCRHLHLTGKIRIATEGINGTVGGSKVATRL 221
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
+++ + S LF+ D+ L+ D+ + K C F L + + +E+V ++P +V
Sbjct: 222 YMEVMLSCPLFK--DY-LSEDDFK-SSKGGSHC-FPELRVGVFEEIVPMG----ISPSEV 272
Query: 126 S--NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETL 183
S N G HLS EFH ++ ++L + N L LLD RN YE++IG+F+ L
Sbjct: 273 SYKNPGIHLSPGEFHKEIE---KLLSQANQEQGDTL-LLDCRNFYESKIGRFQG----CL 324
Query: 184 DPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI 243
P+IR+FS P+++D N + + K VLMYCTGGIRCE SAY+R+KG E VFQL GGI
Sbjct: 325 APDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKE-VFQLKGGI 383
Query: 244 QRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLV 303
+YLE+FPDG FFKGK FVFD R ++ + A ++ C C + +D Y C CR LV
Sbjct: 384 HKYLEEFPDG-FFKGKLFVFDERFALAYNSA-VVSECSYCGAPWDQYKL-CSTPQCRQLV 440
Query: 304 LVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSK 338
L C C+ +G C +C+ G +S P + K
Sbjct: 441 LTCSACQGQGFTACCVMCQDKGGKQASDPTQDSFK 475
|
|
| UNIPROTKB|Q5T7W7 TSTD2 "Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 127/335 (37%), Positives = 186/335 (55%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
Q E+ VLLYY Y + D + + + C L L G++R+A G+N TVGG +
Sbjct: 163 QGSEEGEVLLYYCYHDLEDPQWICAWQTALCQHLHLTGKIRIAAEGINGTVGGSKLATRL 222
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
+++ + S LF+ L D+ + AH C F L + + +E+V ++P +
Sbjct: 223 YVEVMLSFPLFKDD---LCKDDFKTSKGGAH-C-FPELRVGVFEEIVPMG----ISPKKI 273
Query: 126 S--NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETL 183
S G HLS EFH ++ + L + N + +LLD RN YE++IG+F+ L
Sbjct: 274 SYKKPGIHLSPGEFHKEVE---KFLSQANQ-EQSDTILLDCRNFYESKIGRFQG----CL 325
Query: 184 DPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI 243
P+IR+FS P+++D N E + K VLMYCTGGIRCE SAY+++KG E VFQL GGI
Sbjct: 326 APDIRKFSYFPSYVDKNLELFREKRVLMYCTGGIRCERGSAYLKAKGVCKE-VFQLKGGI 384
Query: 244 QRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLV 303
+YLE+FPDG F+KGK FVFD R ++ S ++D++ C C + +D Y C CR LV
Sbjct: 385 HKYLEEFPDG-FYKGKLFVFDERYAL-SYNSDVVSECSYCGARWDQYKL-CSTPQCRQLV 441
Query: 304 LVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDSK 338
L C C+ +G C C+ G S P+ + K
Sbjct: 442 LTCPACQGQGFTACCVTCQDKGSRKVSGPMQDSFK 476
|
|
| MGI|MGI:3039624 Tstd2 "thiosulfate sulfurtransferase (rhodanese)-like domain containing 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 126/334 (37%), Positives = 190/334 (56%)
Query: 6 QSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLES 65
Q E+ VLLYY Y + D + + + + C L L G++R+A G+N TVGG +
Sbjct: 162 QGDEEGEVLLYYCYCDLEDPHWVCAWQTALCHHLHLTGKIRIATEGINGTVGGSKVATRL 221
Query: 66 HIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDV 125
+++ + S LF+ D+ L+ D+ + K C F L + + +E+V ++P V
Sbjct: 222 YVEVMLSCPLFK--DY-LSEDDFK-SSKGGSHC-FPELRVGVFEEIVPMG----ISPSQV 272
Query: 126 S--NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETL 183
S G HLS EFH ++ L +++ + ++LD RN YE++IG+F+ L
Sbjct: 273 SYKKPGIHLSPGEFHKEIEK----LLSQSSEEQGNTIILDCRNFYESKIGRFQG----CL 324
Query: 184 DPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI 243
P+IR+FS P+++D N + + K VLMYCTGGIRCE SAY+R+KG E VFQL GGI
Sbjct: 325 APDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKE-VFQLKGGI 383
Query: 244 QRYLEQFPDGGFFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLV 303
+YLE+FPDG F+KGK FVFD R ++ + ++ ++ C C + +D Y C CR LV
Sbjct: 384 HKYLEEFPDG-FYKGKLFVFDERFAL-AYNSSVVSECSYCGAPWDQYKL-CSTPQCRQLV 440
Query: 304 LVCDTCRMEGAQYVCELCRKHGKSISSSPVSEDS 337
L C C+ +G C C+ G +S P S+DS
Sbjct: 441 LTCSACQGQGFTACCVTCQDKGGKQASGP-SQDS 473
|
|
| UNIPROTKB|P67330 SP_0095 "UPF0176 protein SP_0095" [Streptococcus pneumoniae TIGR4 (taxid:170187)] | Back alignment and assigned GO terms |
|---|
Score = 244 (91.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 66/194 (34%), Positives = 103/194 (53%)
Query: 141 LQSTGQVLD-KE--NATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWI 197
L++TG L KE A DK V+LD RN YE +G FR + P+IR F +LP W+
Sbjct: 113 LETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRG----AIRPDIRNFRELPQWV 168
Query: 198 DNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD--GGF 255
+N E+ K V++YCTGG+RCE S ++ +G +++V QL+GGI Y + P+ G
Sbjct: 169 RDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREG--YKDVGQLHGGIATYGKD-PEVQGEL 225
Query: 256 FKGKNFVFDHRISVGSSDAD--IMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRMEG 313
+ GK +VFD RI+V + + I+G + + Y + C C +L + +
Sbjct: 226 WDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVN-CGNPFCNRRILTSEENEDKY 284
Query: 314 AQYVCELCRKHGKS 327
+ CR H ++
Sbjct: 285 LRGCSHECRVHPRN 298
|
|
| UNIPROTKB|Q5LWN8 SPO0091 "UPF0176 protein SPO0091" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 253 (94.1 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 54/118 (45%), Positives = 73/118 (61%)
Query: 154 TDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYC 213
+DD +VL+D RN YE IG F +DP F D P W + N E+ K V M+C
Sbjct: 122 SDD--VVLIDTRNDYEVAIGTFEG----AIDPMTESFRDFPAWWEANKERFHNKRVAMFC 175
Query: 214 TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP-DGGFFKGKNFVFDHRISVG 270
TGGIRCE ++ Y+ G G E+V+ L GGI RYLE+ P + ++G+ FVFD+R+SVG
Sbjct: 176 TGGIRCEKSTNYLL--GQGVEDVYHLKGGILRYLEEVPAENSTWQGECFVFDNRVSVG 231
|
|
| TIGR_CMR|SPO_0091 SPO_0091 "rhodanese-like domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 253 (94.1 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 54/118 (45%), Positives = 73/118 (61%)
Query: 154 TDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYC 213
+DD +VL+D RN YE IG F +DP F D P W + N E+ K V M+C
Sbjct: 122 SDD--VVLIDTRNDYEVAIGTFEG----AIDPMTESFRDFPAWWEANKERFHNKRVAMFC 175
Query: 214 TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP-DGGFFKGKNFVFDHRISVG 270
TGGIRCE ++ Y+ G G E+V+ L GGI RYLE+ P + ++G+ FVFD+R+SVG
Sbjct: 176 TGGIRCEKSTNYLL--GQGVEDVYHLKGGILRYLEEVPAENSTWQGECFVFDNRVSVG 231
|
|
| UNIPROTKB|Q8WZ82 OVCA2 "Ovarian cancer-associated gene 2 protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 286 (105.7 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 85/246 (34%), Positives = 120/246 (48%)
Query: 367 IVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSV 426
+ +R LR+LCL GFRQ+ F+ +T +L K L+ AE V + PH +P S
Sbjct: 1 MAAQRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSD 60
Query: 427 IQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKT 486
G PP E + R WF ++E AD F + GL+ SL +
Sbjct: 61 F--GSCPPEE--QPRGWWF------SEQE-----AD-VFSALEEPAVCRGLEESLGMVAQ 104
Query: 487 IFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDF-RFAILCSGFALHSAEFEH---- 541
++ GPFDG+LGFSQGAA+AA VCA + RF +L SGF F+
Sbjct: 105 ALNRLGPFDGLLGFSQGAALAALVCALGQAGDPRFPLPRFILLVSGFCPRGIGFKESILQ 164
Query: 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIK 601
R ++ PSLH+FG D+ + +Q S +LA F G ++ + H GH IP +P
Sbjct: 165 RPLSLPSLHVFGD---TDKVIPSQESVQLASQFP-G-AITLTHSGGHFIPAAAPQRQAYL 219
Query: 602 SFLQRF 607
FL +F
Sbjct: 220 KFLDQF 225
|
|
| RGD|1564623 Ovca2 "ovarian tumor suppressor candidate 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 283 (104.7 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 87/248 (35%), Positives = 121/248 (48%)
Query: 367 IVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSV 426
+ R+ LR+LCL GFRQ+ F+ +T +L K L+ AE V + PH P ++ +
Sbjct: 1 MAARQTLRVLCLAGFRQSERGFREKTGALRKALRGHAELVCLSGPH--PVTEAAASEGAG 58
Query: 427 IQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKT 486
+GP P E + R WF + E AD F + GL+ +L +
Sbjct: 59 TDSGPCSPEE--QPRGWWF------SEEE-----AD-VFSALEEPTVCRGLEAALETVAQ 104
Query: 487 IFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDF---RFAILCSGFAL----HSAEF 539
+ GPFDG+LGFSQGAA+AA VCA + G+ F RF IL SGF H
Sbjct: 105 ALDKLGPFDGLLGFSQGAALAAFVCALGQA--GDPRFPLPRFIILVSGFCPRGLDHKEPI 162
Query: 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDE 599
I+ PSLH+FG DR + +Q S +LA F G +V + H GH IP + +
Sbjct: 163 LQSPISLPSLHVFGD---TDRVIPSQESMQLASRFL-G-AVTLTHSGGHFIPAAASHRQA 217
Query: 600 IKSFLQRF 607
FL +F
Sbjct: 218 YLKFLDQF 225
|
|
| WB|WBGene00007730 C25G4.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 184 (69.8 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 51/151 (33%), Positives = 82/151 (54%)
Query: 465 FDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDF- 523
F + + G + S+A + + GPFDG+LGFSQGA+M + A+ + GEI
Sbjct: 70 FSSRESTEVAVGFEESVAAVVKFIEENGPFDGLLGFSQGASMVHLLIAKAQL--GEIKLP 127
Query: 524 --RFAILCSGFALHSAEFEHRSI----NCPSLHIFGGDLGNDRQVANQASKELAKAFEEG 577
RFAI SGF S++ + ++ PS+H+FG D D VA S+++A F+
Sbjct: 128 GIRFAIFFSGFLSLSSKHDSLTLLRIKEFPSMHVFG-DA--DEIVARPKSEKMADMFDVE 184
Query: 578 CSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
+ I HD GH++P+ S + ++I F++ L
Sbjct: 185 -PLRIAHDGGHVVPSMSKHKEKIAGFMREQL 214
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q94AC1 | STR6_ARATH | No assigned EC number | 0.6749 | 0.9276 | 0.9707 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 608 | |||
| PRK00142 | 314 | PRK00142, PRK00142, putative rhodanese-related sul | 7e-81 | |
| COG1054 | 308 | COG1054, COG1054, Predicted sulfurtransferase [Gen | 1e-62 | |
| pfam03959 | 209 | pfam03959, FSH1, Serine hydrolase (FSH1) | 4e-55 | |
| cd01518 | 101 | cd01518, RHOD_YceA, Member of the Rhodanese Homolo | 4e-38 | |
| PRK05320 | 257 | PRK05320, PRK05320, rhodanese superfamily protein; | 7e-37 | |
| PRK01415 | 247 | PRK01415, PRK01415, hypothetical protein; Validate | 1e-22 | |
| smart00450 | 100 | smart00450, RHOD, Rhodanese Homology Domain | 4e-13 | |
| COG0400 | 207 | COG0400, COG0400, Predicted esterase [General func | 2e-07 | |
| pfam00581 | 106 | pfam00581, Rhodanese, Rhodanese-like domain | 3e-07 | |
| pfam02230 | 213 | pfam02230, Abhydrolase_2, Phospholipase/Carboxyles | 3e-05 | |
| cd00158 | 89 | cd00158, RHOD, Rhodanese Homology Domain (RHOD); a | 4e-05 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 5e-05 | |
| COG0607 | 110 | COG0607, PspE, Rhodanese-related sulfurtransferase | 3e-04 | |
| cd01528 | 101 | cd01528, RHOD_2, Member of the Rhodanese Homology | 6e-04 | |
| PRK05597 | 355 | PRK05597, PRK05597, molybdopterin biosynthesis pro | 0.002 |
| >gnl|CDD|234663 PRK00142, PRK00142, putative rhodanese-related sulfurtransferase; Provisional | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 7e-81
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 40/322 (12%)
Query: 8 QEQYGVLLYYKYSTIPDL----NSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSL 63
+ Y VLLYYKY+ I D + C LGL GR+ +A G+N TV G +
Sbjct: 1 MKPYRVLLYYKYTPIEDPEAFRDEHLAL----CKSLGLKGRILVAEEGINGTVSGTIEQT 56
Query: 64 ESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPP 123
E+++ +K+ F FK++ D F LS+++ KE+V ++P
Sbjct: 57 EAYMAWLKADPRFADIRFKISEDD---------GHAFPRLSVKVRKEIVALGLDDDIDP- 106
Query: 124 DVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETL 183
+ N G +L E + +L DD +V +D RN YE IG F +
Sbjct: 107 -LENVGTYLKPKEVNELL-------------DDPDVVFIDMRNDYEYEIGHFEN----AI 148
Query: 184 DPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI 243
+P+I F + P W++ N + L+ K V+MYCTGGIRCE ASA+++ + GF+ V+QL GGI
Sbjct: 149 EPDIETFREFPPWVEENLDPLKDKKVVMYCTGGIRCEKASAWMKHE--GFKEVYQLEGGI 206
Query: 244 QRYLEQFPDGG-FFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRML 302
Y E G + GK +VFD R++V +D +G C C + D Y + C C +L
Sbjct: 207 ITYGEDPETQGLLWDGKLYVFDERMAVPINDEVPIGHCHQCGTPCDRYVN-CANPACNLL 265
Query: 303 VLVCDTCRMEGAQYVCELCRKH 324
+L C+ C + E C +H
Sbjct: 266 ILQCEECEEKYLGCCSEECCEH 287
|
Length = 314 |
| >gnl|CDD|223982 COG1054, COG1054, Predicted sulfurtransferase [General function prediction only] | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 1e-62
Identities = 99/318 (31%), Positives = 153/318 (48%), Gaps = 41/318 (12%)
Query: 9 EQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHID 68
E Y VL YYK+ I D +L + C LG+ GR+ LA G+N TV G ++E+++
Sbjct: 3 EPYTVLAYYKFVPIEDPEALRDPLLALCKALGVKGRILLAHEGINGTVSGSAEAIEAYMA 62
Query: 69 AVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNA 128
+++ F FK++ +D F L +++ KE+V ++P + N
Sbjct: 63 WLRADPGFADLRFKISEADEK---------PFWRLKVKLKKEIVALGVEDDVDPLE--NV 111
Query: 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIR 188
G +LS +++ +L D +V++D RN YE IG F ++P+I
Sbjct: 112 GTYLSPKDWNELLS-------------DPDVVVIDTRNDYEVAIGHFEG----AVEPDIE 154
Query: 189 QFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248
F + P W++ N + L+ K V+MYCTGGIRCE ASA+++ GF+ V+ L GGI +YLE
Sbjct: 155 TFREFPAWVEENLDLLKDKKVVMYCTGGIRCEKASAWMKEN--GFKEVYHLEGGILKYLE 212
Query: 249 QFP-DGGFFKGKNFVFDHRISVGSSDADI-MGSCLLC---SSSFDDYSSR-CRCTHCRML 302
+G + GK FVFD R++V + C C + S C +C
Sbjct: 213 DVGTEGSLWDGKCFVFDERVAVPIGLVEGDHTPCDNCRNPLCNLLFISCEYCEGKYCGC- 271
Query: 303 VLVC-DTCRMEGAQYVCE 319
C D C E E
Sbjct: 272 ---CSDECSEEPRLRYEE 286
|
Length = 308 |
| >gnl|CDD|217816 pfam03959, FSH1, Serine hydrolase (FSH1) | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 4e-55
Identities = 77/236 (32%), Positives = 116/236 (49%), Gaps = 35/236 (14%)
Query: 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNG 430
+KL+ILCLHGF Q+ F+ +T +L K LK E V++DAP L + +++ +
Sbjct: 3 KKLKILCLHGFGQSGEIFRAKTGALRKLLKKGVELVYLDAPFPLA---EKADLPFEESDA 59
Query: 431 PPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ 490
+ AWF D D ++Y GLD SL Y++ +
Sbjct: 60 EEGEDDEPY--RAWFFGDD----------------DTNEY----RGLDESLDYVRDYIKE 97
Query: 491 EGPFDGILGFSQGAAMAASVCAQWERLKGE---IDFRFAILCSGFALHSAEFE---HRSI 544
GPFDGILGFSQGAA+AA + + E +FAIL SGF ++ I
Sbjct: 98 NGPFDGILGFSQGAALAAILASLLEEGLPLESHPPLKFAILISGFRPREPKYAEYYSPPI 157
Query: 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEI 600
PSLH+ G D V + S++LA+A + + ++EH GH +P + P+++ I
Sbjct: 158 QTPSLHVIG---ELDTVVPEERSEKLAEACKNS-ATVLEHPGGHFVPNKKPFVEAI 209
|
This is a family of serine hydrolases. Length = 209 |
| >gnl|CDD|238776 cd01518, RHOD_YceA, Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 4e-38
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 19/120 (15%)
Query: 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIR 188
G +LS E++ +L+ D ++VLLD RN YE IG F+ ++P++
Sbjct: 1 GTYLSPAEWNELLE-------------DPEVVLLDVRNDYEYDIGHFKG----AVNPDVD 43
Query: 189 QFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248
F + P W+D N + L+GK VLMYCTGGIRCE ASAY++ + GF+NV+QL GGI +YLE
Sbjct: 44 TFREFPFWLDENLDLLKGKKVLMYCTGGIRCEKASAYLKER--GFKNVYQLKGGILKYLE 101
|
This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins. Length = 101 |
| >gnl|CDD|235405 PRK05320, PRK05320, rhodanese superfamily protein; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 7e-37
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 36/258 (13%)
Query: 17 YKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLF 76
YK+ ++ D +L + C LGL G + LAP G+N+ + G ++++ +++ + F
Sbjct: 9 YKFVSLDDPETLRPLVLARCEALGLKGTILLAPEGINLFLAGTREAIDAFYAWLRADARF 68
Query: 77 EGTDFKLASSDY-PLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAV 135
K + SD P F + +++ +E++T P + P GR S
Sbjct: 69 ADLQVKESLSDSQP----------FRRMLVKLKREIITMK-RPAIRPEL----GRAPSV- 112
Query: 136 EFHSILQSTGQVLDK--ENATDD--KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS 191
L + + DD + +V+LD RN +E +G F LD I +F+
Sbjct: 113 --------DAATLKRWLDQGHDDAGRPVVMLDTRNAFEVDVGTFD----GALDYRIDKFT 160
Query: 192 DLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP 251
+ P + + L GK V+ +CTGGIRCE A+ +++ G +NV+QL GGI +Y E+
Sbjct: 161 EFPEALAAHRADLAGKTVVSFCTGGIRCEKAAIHMQE--VGIDNVYQLEGGILKYFEEV- 217
Query: 252 DGGFFKGKNFVFDHRISV 269
G + G FVFD+R ++
Sbjct: 218 GGAHYDGDCFVFDYRTAL 235
|
Length = 257 |
| >gnl|CDD|167229 PRK01415, PRK01415, hypothetical protein; Validated | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 1e-22
Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGG 216
+ ++++D RN YE +G F++ ++P + F P W+ N E L+GK + M CTGG
Sbjct: 126 QDVIVIDTRNDYEVEVGTFKS----AINPNTKTFKQFPAWVQQNQELLKGKKIAMVCTGG 181
Query: 217 IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD-GGFFKGKNFVFDHRISV 269
IRCE +++ ++S G++ V+ L GGI +YLE + ++G+ FVFD R +V
Sbjct: 182 IRCEKSTSLLKS--IGYDEVYHLKGGILQYLEDTQNKNNLWQGECFVFDDRRAV 233
|
Length = 247 |
| >gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 4e-13
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 155 DDKKLVLLDARNLYETRIGKFRT----PSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVL 210
+D+K+VLLD R+ E G P E LD + + K V+
Sbjct: 1 NDEKVVLLDVRSPEEYEGGHIPGAVNIPLSELLDRRGELDILEFEELLKRLGLDKDKPVV 60
Query: 211 MYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252
+YC G R A+ +R GF+NV+ L GG + + P
Sbjct: 61 VYCRSGNRSAKAAWLLRE--LGFKNVYLLDGGYKEWSAAGPP 100
|
An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100 |
| >gnl|CDD|223477 COG0400, COG0400, Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 497 ILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDL 556
++GFSQGA +A S+ L F AIL SG E P L G
Sbjct: 103 LIGFSQGANIALSLG-----LTLPGLFAGAILFSGMLPLEPELLPDLAGTPILLSHG--- 154
Query: 557 GNDRQVANQASKELAKAFE-EGCSV-IIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
D V ++ LA+ G V + H+ GH IP ++ +S+L L
Sbjct: 155 TEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPEE--LEAARSWLANTL 206
|
Length = 207 |
| >gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-07
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 155 DDKKLVLLDARNLYETRIGKFRT-----PSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209
+ +VL+D R+ E G S+ +LD + +L +D + K +
Sbjct: 10 EADDVVLIDVRSPEEYAKGHIPGAVNIPLSLPSLDKLESELEELGKKLDKD------KTI 63
Query: 210 LMYCTGGIRCEMASAYVRSKG---AGFENVFQLYGGIQRYLEQ 249
++YC G R A+A + + G++NV+ L GG + + +
Sbjct: 64 VVYCASGNRSGQAAALLLALILKALGYKNVYVLDGGFEAWKAE 106
|
Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106 |
| >gnl|CDD|216940 pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 33/151 (21%), Positives = 51/151 (33%), Gaps = 19/151 (12%)
Query: 465 FDPHQYQQQTDGLDVSLAYLKTIFSQEG----PFDGIL--GFSQGAAMA-ASVCAQWERL 517
P+ + G+ S ++ + E P I+ GFSQGAA+A + + L
Sbjct: 69 LSPNA-SEDEAGIKNSAETIEELIDAELKTGIPASRIIIGGFSQGAAVALYTALTSPQPL 127
Query: 518 KGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVAN---QASKELAKAF 574
G I SG +F + I D V + +KE K
Sbjct: 128 GG------IIAFSGALPLPQKFPQHPTGVADIPILQLHGYEDPVVPLALGKLAKEYLKTL 181
Query: 575 EEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605
+ GH I + + +IK FL
Sbjct: 182 LNPVTFKSYPGMGHSICPQE--MQDIKKFLA 210
|
This family consists of both phospholipases and carboxylesterases with broad substrate specificity, and is structurally related to alpha/beta hydrolases pfam00561. Length = 213 |
| >gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-05
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 155 DDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCT 214
DD+ VLLD R E G ++ E+ + + L E + K +++YC
Sbjct: 7 DDEDAVLLDVREPEEYAAGHI-PGAINIPLSELEERAAL-------LELDKDKPIVVYCR 58
Query: 215 GGIRCEMASAYVRSKGAGFENVFQLYGGIQ 244
G R A+ +R AG NV+ L GG+
Sbjct: 59 SGNRSARAAKLLRK--AGGTNVYNLEGGML 86
|
The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Query: 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGD 555
++G S G +A + A+ R+K A++ + A + + P L I G
Sbjct: 61 VLVGHSLGGGVALLLAARDPRVKA------AVVLAAGDPPDALDDLAKLTVPVLIIHG-- 112
Query: 556 LGNDRQVANQASKELAKAFEEGCSVIIEHDCGH 588
D V + ++ LA A +++ GH
Sbjct: 113 -TRDGVVPPEEAEALAAALPGPAELVVIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|223680 COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 3e-04
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 155 DDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCT 214
+ VLLD R E G ++ E++ +L E +++YC
Sbjct: 17 AGEDAVLLDVREPEEYERGHIPGAAINIPLSELKAAENLL-------ELPDDDPIVVYCA 69
Query: 215 GGIRCEMASAYVRSKGAGFENVFQLYGGI 243
G+R A+A ++ AGF NV+ L GGI
Sbjct: 70 SGVRSAAAAAALKL--AGFTNVYNLDGGI 96
|
Length = 110 |
| >gnl|CDD|238786 cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2 | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 6e-04
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 153 ATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF--SDLPTWIDNNAEQLQGKHVL 210
A + ++ VL+D R E I P S++P K ++
Sbjct: 12 ADEREEPVLIDVREPEELEIAFL---------PGFLHLPMSEIPERSKELDSDNPDKDIV 62
Query: 211 MYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRY 246
+ C G R + ++ GFENV+ L GGI +
Sbjct: 63 VLCHHGGRSMQVAQWLLR--QGFENVYNLQGGIDAW 96
|
Subgroup 2 includes uncharacterized putative rhodanese-related domains. Length = 101 |
| >gnl|CDD|235526 PRK05597, PRK05597, molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 51/220 (23%), Positives = 76/220 (34%), Gaps = 55/220 (25%)
Query: 35 NCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYPLNGKV 94
+CSQ G+LG V V V G S++ A++++ L G PL GK+
Sbjct: 184 SCSQAGVLGPV--------VGVVG--SAM-----AMEALKLITGVG-------TPLIGKL 221
Query: 95 AHECGFTSLSIRIVKELVTFSSHP-----LLNPPDVSNAGRHLSAVEFHSILQSTGQVLD 149
+ E + +P + V H I G+VLD
Sbjct: 222 GYYDSLDGTW-----EYIPVVGNPAVLERVRGSTPV------------HGISGGFGEVLD 264
Query: 150 KENATDDKKLV-LLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208
+ V L+D R E L IR N G
Sbjct: 265 VPRVSALPDGVTLIDVREPSEFAAYSIPGAHNVPLS-AIR--EGA-----NPPSVSAGDE 316
Query: 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248
V++YC G+R A A + AG+ + L GGI+ +L+
Sbjct: 317 VVVYCAAGVRSAQAVAILER--AGYTGMSSLDGGIEGWLD 354
|
Length = 355 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 608 | |||
| COG1054 | 308 | Predicted sulfurtransferase [General function pred | 100.0 | |
| PRK00142 | 314 | putative rhodanese-related sulfurtransferase; Prov | 100.0 | |
| PRK01415 | 247 | hypothetical protein; Validated | 100.0 | |
| PRK05320 | 257 | rhodanese superfamily protein; Provisional | 100.0 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 100.0 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.97 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.88 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.87 | |
| cd01518 | 101 | RHOD_YceA Member of the Rhodanese Homology Domain | 99.82 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.81 | |
| cd01523 | 100 | RHOD_Lact_B Member of the Rhodanese Homology Domai | 99.69 | |
| cd01533 | 109 | 4RHOD_Repeat_2 Member of the Rhodanese Homology Do | 99.67 | |
| cd01528 | 101 | RHOD_2 Member of the Rhodanese Homology Domain sup | 99.65 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.65 | |
| cd01526 | 122 | RHOD_ThiF Member of the Rhodanese Homology Domain | 99.65 | |
| cd01534 | 95 | 4RHOD_Repeat_3 Member of the Rhodanese Homology Do | 99.64 | |
| cd01522 | 117 | RHOD_1 Member of the Rhodanese Homology Domain sup | 99.61 | |
| cd01520 | 128 | RHOD_YbbB Member of the Rhodanese Homology Domain | 99.61 | |
| PRK00162 | 108 | glpE thiosulfate sulfurtransferase; Validated | 99.6 | |
| cd01444 | 96 | GlpE_ST GlpE sulfurtransferase (ST) and homologs a | 99.6 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.58 | |
| cd01525 | 105 | RHOD_Kc Member of the Rhodanese Homology Domain su | 99.58 | |
| cd01519 | 106 | RHOD_HSP67B2 Member of the Rhodanese Homology Doma | 99.58 | |
| PLN02160 | 136 | thiosulfate sulfurtransferase | 99.58 | |
| cd01530 | 121 | Cdc25 Cdc25 phosphatases are members of the Rhodan | 99.57 | |
| cd01531 | 113 | Acr2p Eukaryotic arsenate resistance proteins are | 99.57 | |
| cd01527 | 99 | RHOD_YgaP Member of the Rhodanese Homology Domain | 99.56 | |
| cd01529 | 96 | 4RHOD_Repeats Member of the Rhodanese Homology Dom | 99.55 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.55 | |
| KOG1530 | 136 | consensus Rhodanese-related sulfurtransferase [Ino | 99.53 | |
| cd01524 | 90 | RHOD_Pyr_redox Member of the Rhodanese Homology Do | 99.53 | |
| cd01443 | 113 | Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda | 99.52 | |
| cd01447 | 103 | Polysulfide_ST Polysulfide-sulfurtransferase - Rho | 99.52 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.51 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.51 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.51 | |
| TIGR03865 | 162 | PQQ_CXXCW PQQ-dependent catabolism-associated CXXC | 99.51 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.5 | |
| cd01449 | 118 | TST_Repeat_2 Thiosulfate sulfurtransferase (TST), | 99.5 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.5 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.49 | |
| PF00581 | 113 | Rhodanese: Rhodanese-like domain This Prosite entr | 99.48 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.47 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.47 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.46 | |
| smart00450 | 100 | RHOD Rhodanese Homology Domain. An alpha beta fold | 99.46 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.46 | |
| cd01521 | 110 | RHOD_PspE2 Member of the Rhodanese Homology Domain | 99.45 | |
| COG0607 | 110 | PspE Rhodanese-related sulfurtransferase [Inorgani | 99.45 | |
| cd01448 | 122 | TST_Repeat_1 Thiosulfate sulfurtransferase (TST), | 99.45 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.44 | |
| PLN02578 | 354 | hydrolase | 99.44 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.43 | |
| PRK10566 | 249 | esterase; Provisional | 99.43 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.42 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.41 | |
| cd01532 | 92 | 4RHOD_Repeat_1 Member of the Rhodanese Homology Do | 99.41 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.4 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.4 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.39 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.38 | |
| TIGR02981 | 101 | phageshock_pspE phage shock operon rhodanese PspE. | 99.38 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 99.37 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.37 | |
| cd00158 | 89 | RHOD Rhodanese Homology Domain (RHOD); an alpha be | 99.36 | |
| PRK07411 | 390 | hypothetical protein; Validated | 99.35 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.35 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.34 | |
| PRK10287 | 104 | thiosulfate:cyanide sulfurtransferase; Provisional | 99.34 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 99.33 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.33 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.33 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 99.33 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.32 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.31 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.3 | |
| cd01535 | 145 | 4RHOD_Repeat_4 Member of the Rhodanese Homology Do | 99.3 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.3 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.29 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.29 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.29 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.25 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.25 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.24 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 99.24 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.23 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.23 | |
| cd01446 | 132 | DSP_MapKP N-terminal regulatory rhodanese domain o | 99.23 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.21 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.21 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.2 | |
| PRK11784 | 345 | tRNA 2-selenouridine synthase; Provisional | 99.19 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.19 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.18 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.17 | |
| TIGR03167 | 311 | tRNA_sel_U_synt tRNA 2-selenouridine synthase. The | 99.17 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.12 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.08 | |
| PRK11493 | 281 | sseA 3-mercaptopyruvate sulfurtransferase; Provisi | 99.08 | |
| PRK09629 | 610 | bifunctional thiosulfate sulfurtransferase/phospha | 99.07 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.07 | |
| KOG2017 | 427 | consensus Molybdopterin synthase sulfurylase [Coen | 99.07 | |
| cd01445 | 138 | TST_Repeats Thiosulfate sulfurtransferases (TST) c | 99.06 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.06 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.05 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.05 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.05 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.03 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.02 | |
| PLN02723 | 320 | 3-mercaptopyruvate sulfurtransferase | 99.01 | |
| PLN02511 | 388 | hydrolase | 99.01 | |
| PLN02723 | 320 | 3-mercaptopyruvate sulfurtransferase | 98.98 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 98.96 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 98.95 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 98.94 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.94 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 98.93 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 98.91 | |
| PRK11493 | 281 | sseA 3-mercaptopyruvate sulfurtransferase; Provisi | 98.9 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.89 | |
| PLN00021 | 313 | chlorophyllase | 98.87 | |
| PRK09629 | 610 | bifunctional thiosulfate sulfurtransferase/phospha | 98.84 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 98.83 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 98.77 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 98.76 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 98.75 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 98.74 | |
| PRK01269 | 482 | tRNA s(4)U8 sulfurtransferase; Provisional | 98.65 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 98.65 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 98.65 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 98.62 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 98.62 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 98.6 | |
| PLN02872 | 395 | triacylglycerol lipase | 98.59 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 98.56 | |
| KOG3772 | 325 | consensus M-phase inducer phosphatase [Cell cycle | 98.53 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 98.53 | |
| COG2897 | 285 | SseA Rhodanese-related sulfurtransferase [Inorgani | 98.46 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.43 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 98.38 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 98.34 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 98.33 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.32 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.3 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.28 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 98.26 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.21 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 98.2 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 98.2 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 98.17 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.17 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 98.13 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.13 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.11 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.09 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.06 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.01 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.0 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 97.99 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 97.99 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 97.98 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.97 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.95 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 97.95 | |
| PRK10115 | 686 | protease 2; Provisional | 97.94 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 97.94 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.91 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 97.87 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 97.85 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 97.8 | |
| COG2897 | 285 | SseA Rhodanese-related sulfurtransferase [Inorgani | 97.8 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 97.78 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 97.77 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 97.72 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 97.7 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.68 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 97.65 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 97.51 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 97.49 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 97.41 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 97.41 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 97.37 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 97.34 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 97.34 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 97.3 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 97.28 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 97.14 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.1 | |
| COG5105 | 427 | MIH1 Mitotic inducer, protein phosphatase [Cell di | 97.09 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 97.09 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 97.06 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 97.05 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 97.04 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.01 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 96.96 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 96.92 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 96.84 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.67 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 96.67 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 96.43 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 96.41 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 96.4 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.34 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 96.27 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 96.22 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.22 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.07 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.05 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 96.05 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 95.86 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 95.85 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 95.79 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 95.7 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 95.53 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 95.52 | |
| PRK14429 | 90 | acylphosphatase; Provisional | 95.52 | |
| PF00708 | 91 | Acylphosphatase: Acylphosphatase; InterPro: IPR001 | 95.49 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 95.44 | |
| PRK14448 | 90 | acylphosphatase; Provisional | 95.4 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 95.35 | |
| PRK14420 | 91 | acylphosphatase; Provisional | 95.24 | |
| PRK14430 | 92 | acylphosphatase; Provisional | 95.16 | |
| COG1254 | 92 | AcyP Acylphosphatases [Energy production and conve | 95.16 | |
| PRK14447 | 95 | acylphosphatase; Provisional | 95.15 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 95.1 | |
| PRK14449 | 90 | acylphosphatase; Provisional | 95.08 | |
| TIGR01244 | 135 | conserved hypothetical protein TIGR01244. No membe | 94.98 | |
| PRK14422 | 93 | acylphosphatase; Provisional | 94.98 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 94.94 | |
| PRK14436 | 91 | acylphosphatase; Provisional | 94.93 | |
| PRK14435 | 90 | acylphosphatase; Provisional | 94.91 | |
| KOG1529 | 286 | consensus Mercaptopyruvate sulfurtransferase/thios | 94.89 | |
| PRK14433 | 87 | acylphosphatase; Provisional | 94.88 | |
| PRK14450 | 91 | acylphosphatase; Provisional | 94.85 | |
| PRK14426 | 92 | acylphosphatase; Provisional | 94.85 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 94.84 | |
| PRK14445 | 91 | acylphosphatase; Provisional | 94.82 | |
| PRK14451 | 89 | acylphosphatase; Provisional | 94.8 | |
| PRK14428 | 97 | acylphosphatase; Provisional | 94.79 | |
| PRK14440 | 90 | acylphosphatase; Provisional | 94.78 | |
| PRK14427 | 94 | acylphosphatase; Provisional | 94.63 | |
| PRK14432 | 93 | acylphosphatase; Provisional | 94.62 | |
| PRK14421 | 99 | acylphosphatase; Provisional | 94.61 | |
| PRK14438 | 91 | acylphosphatase; Provisional | 94.57 | |
| PRK14425 | 94 | acylphosphatase; Provisional | 94.56 | |
| PRK14423 | 92 | acylphosphatase; Provisional | 94.43 | |
| PRK14444 | 92 | acylphosphatase; Provisional | 94.43 | |
| PRK14424 | 94 | acylphosphatase; Provisional | 94.39 | |
| PRK14446 | 88 | acylphosphatase; Provisional | 94.34 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 94.22 | |
| PRK14452 | 107 | acylphosphatase; Provisional | 94.1 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 93.97 | |
| PRK14437 | 109 | acylphosphatase; Provisional | 93.81 | |
| PRK14442 | 91 | acylphosphatase; Provisional | 93.62 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 93.58 | |
| PRK14434 | 92 | acylphosphatase; Provisional | 93.54 | |
| PRK14441 | 93 | acylphosphatase; Provisional | 93.37 | |
| PRK14431 | 89 | acylphosphatase; Provisional | 93.36 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 93.33 | |
| COG2603 | 334 | Predicted ATPase [General function prediction only | 93.22 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 92.34 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 92.24 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 92.22 | |
| PF04273 | 110 | DUF442: Putative phosphatase (DUF442); InterPro: I | 92.2 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 92.14 | |
| KOG3360 | 98 | consensus Acylphosphatase [Energy production and c | 91.79 | |
| PLN02727 | 986 | NAD kinase | 91.45 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 91.44 | |
| PRK14443 | 93 | acylphosphatase; Provisional | 91.35 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 91.28 | |
| KOG1529 | 286 | consensus Mercaptopyruvate sulfurtransferase/thios | 91.05 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 90.97 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 90.82 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 90.79 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 90.49 | |
| PRK14439 | 163 | acylphosphatase; Provisional | 90.09 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 88.86 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 88.45 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 87.8 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 87.58 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 87.2 | |
| PLN02847 | 633 | triacylglycerol lipase | 86.77 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 86.66 | |
| PRK14890 | 59 | putative Zn-ribbon RNA-binding protein; Provisiona | 86.43 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 86.29 | |
| COG2888 | 61 | Predicted Zn-ribbon RNA-binding protein with a fun | 86.11 | |
| PLN02408 | 365 | phospholipase A1 | 84.98 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 83.98 | |
| PLN02454 | 414 | triacylglycerol lipase | 83.43 | |
| cd00127 | 139 | DSPc Dual specificity phosphatases (DSP); Ser/Thr | 83.39 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 83.22 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 80.62 | |
| PLN02571 | 413 | triacylglycerol lipase | 80.38 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 80.3 |
| >COG1054 Predicted sulfurtransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-78 Score=602.41 Aligned_cols=278 Identities=35% Similarity=0.681 Sum_probs=256.1
Q ss_pred CceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCC
Q 007311 9 EQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDY 88 (608)
Q Consensus 9 ~~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~ 88 (608)
++|.|++||+|++|+||++++++|+++|+++||+||||||.|||||||||+.+++++|++||+++|+|+++.||+|.++
T Consensus 3 ~~~~vla~Y~f~~i~dp~~~~~~l~~~~~~~~vkGrillA~EGINgtvsG~~e~~~~~~~~l~a~~~f~~l~~K~s~~~- 81 (308)
T COG1054 3 EPYTVLAYYKFVPIEDPEALRDPLLALCKALGVKGRILLAHEGINGTVSGSAEAIEAYMAWLRADPGFADLRFKISEAD- 81 (308)
T ss_pred cceEEEEEEEEEecCCHHHHHHHHHHHHHHcCceeEEEEccCCcceeEecCHHHHHHHHHHHHhCcccccceeeecccc-
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh
Q 007311 89 PLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY 168 (608)
Q Consensus 89 ~~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~ 168 (608)
+++|++|+||+|+|||+||..+.+++ ....|.||+|+||+++|.+ +++++||+||.|
T Consensus 82 --------~~pF~r~kVk~kkEIV~lg~~ddv~p--~~~vG~yl~p~~wn~~l~D-------------~~~vviDtRN~Y 138 (308)
T COG1054 82 --------EKPFWRLKVKLKKEIVALGVEDDVDP--LENVGTYLSPKDWNELLSD-------------PDVVVIDTRNDY 138 (308)
T ss_pred --------CCCcceEEEeehhhheecCCCCCcCc--cccccCccCHHHHHHHhcC-------------CCeEEEEcCcce
Confidence 46999999999999999998764553 5667999999999999976 689999999999
Q ss_pred hhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 169 ETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 169 E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||++|||.| |++|++++|++||.|+.++.+..++|+|+||||||||||||++||++. ||++||||+|||..|++
T Consensus 139 E~~iG~F~g----Av~p~~~tFrefP~~v~~~~~~~~~KkVvmyCTGGIRCEKas~~m~~~--GF~eVyhL~GGIl~Y~e 212 (308)
T COG1054 139 EVAIGHFEG----AVEPDIETFREFPAWVEENLDLLKDKKVVMYCTGGIRCEKASAWMKEN--GFKEVYHLEGGILKYLE 212 (308)
T ss_pred eEeeeeecC----ccCCChhhhhhhHHHHHHHHHhccCCcEEEEcCCceeehhhHHHHHHh--cchhhhcccchHHHHhh
Confidence 999999999 899999999999999999999999999999999999999999999997 99999999999999999
Q ss_pred hCCCC-CeeceeeeeeeeccccCCCCCCc-cccccCCCCccccccCCCCCccccceEEeCccccccccccccchhhhcCC
Q 007311 249 QFPDG-GFFKGKNFVFDHRISVGSSDADI-MGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRMEGAQYVCELCRKHGK 326 (608)
Q Consensus 249 ~~~~~-~~~~G~~fVFD~R~~~~~~~~~~-~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~~~~~~~c~~c~~~~~ 326 (608)
+++.. .+|+|+|||||+|+||+++.... +..|. ||+|+.|+.++++|+.|..+...+|.+.|+++.+
T Consensus 213 ~~~~~g~lw~G~cFVFDeRvav~~~l~~~~~~~C~-----------~C~~p~~~~~~~~~~~~~~~~~~~C~~ec~~~~~ 281 (308)
T COG1054 213 DVGTEGSLWDGKCFVFDERVAVPIGLVEGDHTPCD-----------NCRNPLCNLLFISCEYCEGKYCGCCSDECSEEPR 281 (308)
T ss_pred hcCccCceeccceeEecceecccCcccCCCcchhh-----------hcCCCCCHHHhhcchhhhcccCCCccHHHhhhhh
Confidence 99874 58999999999999999864433 43343 7999999999999999998777766688998876
Q ss_pred C
Q 007311 327 S 327 (608)
Q Consensus 327 ~ 327 (608)
.
T Consensus 282 ~ 282 (308)
T COG1054 282 L 282 (308)
T ss_pred h
Confidence 3
|
|
| >PRK00142 putative rhodanese-related sulfurtransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-65 Score=534.60 Aligned_cols=287 Identities=36% Similarity=0.704 Sum_probs=261.7
Q ss_pred ceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 007311 10 QYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYP 89 (608)
Q Consensus 10 ~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~~ 89 (608)
+|.|++||||++|+||+++++++++.|+.++++|||++|.|||||||+|+.+++.+|+.||..+|+|+++++|++.++
T Consensus 3 ~~~v~~~Y~f~~i~~~~~~~~~l~~~~~~~d~rg~i~~a~egIngtis~~~~~~~~~~~~l~~~~~~~~i~l~~~~~~-- 80 (314)
T PRK00142 3 PYRVLLYYKYTPIEDPEAFRDEHLALCKSLGLKGRILVAEEGINGTVSGTIEQTEAYMAWLKADPRFADIRFKISEDD-- 80 (314)
T ss_pred ccEEEEEEccccCCCHHHHHHHHHHHHHHcCCeeEEEEcCCCceEEEEecHHHHHHHHHHHhhCcCCCCceEEecccc--
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhh
Q 007311 90 LNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYE 169 (608)
Q Consensus 90 ~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E 169 (608)
.++|++|++|+++|||++|.++.+. +....+.+|+|+||++++++ ++++||||||.+|
T Consensus 81 -------~~~f~~l~~~~~~eLv~~G~d~~v~--~~~~~~~~is~~el~~~l~~-------------~~~vlIDVR~~~E 138 (314)
T PRK00142 81 -------GHAFPRLSVKVRKEIVALGLDDDID--PLENVGTYLKPKEVNELLDD-------------PDVVFIDMRNDYE 138 (314)
T ss_pred -------CCCcccceeeeeeeeeecCCCCCCC--ccccCCcccCHHHHHHHhcC-------------CCeEEEECCCHHH
Confidence 3589999999999999999864443 35577999999999999975 5799999999999
Q ss_pred hhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 170 TRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 170 ~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|++|||+| +++++...|.+++.++.+.+...++++|||||++|+||++|+.+|+++ ||+|||+|+|||.+|.++
T Consensus 139 ~~~GhI~G----Ai~ip~~~~~~~~~~l~~~~~~~kdk~IvvyC~~G~Rs~~aa~~L~~~--Gf~~V~~L~GGi~~w~~~ 212 (314)
T PRK00142 139 YEIGHFEN----AIEPDIETFREFPPWVEENLDPLKDKKVVMYCTGGIRCEKASAWMKHE--GFKEVYQLEGGIITYGED 212 (314)
T ss_pred HhcCcCCC----CEeCCHHHhhhhHHHHHHhcCCCCcCeEEEECCCCcHHHHHHHHHHHc--CCCcEEEecchHHHHHHh
Confidence 99999999 788888888888888866566679999999999999999999999997 999999999999999999
Q ss_pred CCCCC-eeceeeeeeeeccccCCCCCCccccccCCCCccccccCCCCCccccceEEeCccccccccccccchhhhcCCC
Q 007311 250 FPDGG-FFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRMEGAQYVCELCRKHGKS 327 (608)
Q Consensus 250 ~~~~~-~~~G~~fVFD~R~~~~~~~~~~~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~~~~~~~c~~c~~~~~~ 327 (608)
+++++ +|+|+|||||+|++++.+..+++++|+.||+|+|+|. ||+|+.||+++++|+.|..+...+||..|..+.+.
T Consensus 213 ~~~~~~~w~G~~fVFD~R~~~~~~~~~~~~~c~~cg~~~~~~~-~C~~~~C~~~~~~c~~c~~~~~~~~s~~~~~~~~~ 290 (314)
T PRK00142 213 PETQGLLWDGKLYVFDERMAVPINDEVPIGHCHQCGTPCDRYV-NCANPACNLLILQCEECEEKYLGCCSEECCEHPRN 290 (314)
T ss_pred hccccceeecCCccccCcccCCCCccccccccccCCCCcchhh-CCCCCCCCCeEeechhhhHHhcCccCchhcccccC
Confidence 98764 9999999999999998876788999999999999998 89999999999999999988888888778776643
|
|
| >PRK01415 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-64 Score=502.61 Aligned_cols=234 Identities=28% Similarity=0.555 Sum_probs=216.4
Q ss_pred CceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCC
Q 007311 9 EQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDY 88 (608)
Q Consensus 9 ~~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~ 88 (608)
++|.|++||+|++|+||++++++|+++|+.++|+||||||+|||||||||+.+++++|+++|+++++|+++++|+|.++
T Consensus 3 ~~~~v~~fY~f~~i~~~~~~~~~l~~~~~~~~~~G~i~la~EGIN~tisg~~~~~~~~~~~l~~~~~~~~~~~k~s~~~- 81 (247)
T PRK01415 3 EKIAILSAYSFVNIEEPANLIPKLLLIGKRKYVRGTILLANEGFNGSFSGSYENVNLVLEELIKLTGPKDVNVKINYSD- 81 (247)
T ss_pred CCcEEEEEEccccCCCHHHHHHHHHHHHHHcCCeeEEEEccCccceEeeCCHHHHHHHHHHHHhCcCCCCceeeccccc-
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh
Q 007311 89 PLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY 168 (608)
Q Consensus 89 ~~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~ 168 (608)
.++|++|+||+|+|||+||.. .+++ ....|++|+|++|++++++ ++++||||||++
T Consensus 82 --------~~~F~~l~vr~k~eiV~~g~~-~~~~--~~~~g~~i~p~e~~~ll~~-------------~~~vvIDVRn~~ 137 (247)
T PRK01415 82 --------VHPFQKLKVRLKKEIVAMNVD-DLNV--DLFKGEYIEPKDWDEFITK-------------QDVIVIDTRNDY 137 (247)
T ss_pred --------CCCCCccEEEeeceEEecCCC-CCCc--cccCccccCHHHHHHHHhC-------------CCcEEEECCCHH
Confidence 469999999999999999984 3443 3457999999999999976 589999999999
Q ss_pred hhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 169 ETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 169 E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||++|||+| ++++++..|+++|.|++...+.+++++|+|||++|+||++|+++|+++ ||+|||+|+|||.+|++
T Consensus 138 E~~~Ghi~g----Ainip~~~f~e~~~~~~~~~~~~k~k~Iv~yCtgGiRs~kAa~~L~~~--Gf~~Vy~L~GGi~~w~~ 211 (247)
T PRK01415 138 EVEVGTFKS----AINPNTKTFKQFPAWVQQNQELLKGKKIAMVCTGGIRCEKSTSLLKSI--GYDEVYHLKGGILQYLE 211 (247)
T ss_pred HHhcCCcCC----CCCCChHHHhhhHHHHhhhhhhcCCCeEEEECCCChHHHHHHHHHHHc--CCCcEEEechHHHHHHH
Confidence 999999999 888888889999998876666789999999999999999999999997 99999999999999999
Q ss_pred hCCC-CCeeceeeeeeeeccccCCCC
Q 007311 249 QFPD-GGFFKGKNFVFDHRISVGSSD 273 (608)
Q Consensus 249 ~~~~-~~~~~G~~fVFD~R~~~~~~~ 273 (608)
++++ +++|+|+|||||+|+||++..
T Consensus 212 ~~~~~~~~w~G~~fVFD~R~av~~~l 237 (247)
T PRK01415 212 DTQNKNNLWQGECFVFDDRRAVTDDL 237 (247)
T ss_pred hcccCCCeeeeeeeeeCceeecCCCC
Confidence 9886 479999999999999998753
|
|
| >PRK05320 rhodanese superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-61 Score=486.96 Aligned_cols=253 Identities=27% Similarity=0.534 Sum_probs=225.1
Q ss_pred ceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 007311 10 QYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYP 89 (608)
Q Consensus 10 ~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~~ 89 (608)
.|.|++||||++|+||++++++|+++|+.++|+||||||+|||||||||+.+.+++|+.+|++++.|+++.+|++.+..
T Consensus 2 ~~~~~~~Y~f~~i~~~~~~~~~~~~~~~~~~~~G~i~ia~eGiN~t~~g~~~~id~~~~~l~~~~~~~dl~~k~~~~~~- 80 (257)
T PRK05320 2 QIVNIAAYKFVSLDDPETLRPLVLARCEALGLKGTILLAPEGINLFLAGTREAIDAFYAWLRADARFADLQVKESLSDS- 80 (257)
T ss_pred ceEEEEEEceeecCCHHHHHHHHHHHHHHCCCeEEEEEcCCCceEEEEeeHHHHHHHHHHHhhCCCccCceeecccccC-
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhh
Q 007311 90 LNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYE 169 (608)
Q Consensus 90 ~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E 169 (608)
+||.+|+||+|+|||++|.. .++ .....+.+|+|+||++++++. .++.+++++||||||.+|
T Consensus 81 --------~pF~~l~vk~k~eiv~~g~~-~~n--~~~~~~~~is~~el~~~l~~~-------~~~~~~~~vlIDVR~~~E 142 (257)
T PRK05320 81 --------QPFRRMLVKLKREIITMKRP-AIR--PELGRAPSVDAATLKRWLDQG-------HDDAGRPVVMLDTRNAFE 142 (257)
T ss_pred --------CCchhccchhhhHHhhcCCc-ccC--cccCcCceeCHHHHHHHHhcc-------ccccCCCeEEEECCCHHH
Confidence 49999999999999999963 232 244568999999999999762 011124689999999999
Q ss_pred hhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 170 TRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 170 ~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|++|||+| +++++...|++++.|+.+.....++|+|+|||++|+||++|+.+|+++ ||+|||+|+|||.+|.++
T Consensus 143 ~~~Ghi~G----AiniPl~~f~~~~~~l~~~~~~~kdk~IvvyC~~G~Rs~~Aa~~L~~~--Gf~~V~~L~GGi~~w~~~ 216 (257)
T PRK05320 143 VDVGTFDG----ALDYRIDKFTEFPEALAAHRADLAGKTVVSFCTGGIRCEKAAIHMQEV--GIDNVYQLEGGILKYFEE 216 (257)
T ss_pred HccCccCC----CEeCChhHhhhhHHHHHhhhhhcCCCeEEEECCCCHHHHHHHHHHHHc--CCcceEEeccCHHHHHHh
Confidence 99999999 788888888899998876554458999999999999999999999997 999999999999999999
Q ss_pred CCCCCeeceeeeeeeeccccCCC-CCCccccccCCCCccc
Q 007311 250 FPDGGFFKGKNFVFDHRISVGSS-DADIMGSCLLCSSSFD 288 (608)
Q Consensus 250 ~~~~~~~~G~~fVFD~R~~~~~~-~~~~~~~C~~C~~~~~ 288 (608)
+++ .+|+|+|||||+|+||++. .+.+++.|+.|+.|..
T Consensus 217 ~~~-~~~~G~~fVFD~R~~~~~~~~~~~~~~c~~c~~~~~ 255 (257)
T PRK05320 217 VGG-AHYDGDCFVFDYRTALDPQLAPLVDVTCFACRAVVT 255 (257)
T ss_pred CCC-CeeeeeeeeecCeeecCCCCccCccceecCCCCcCC
Confidence 865 5799999999999999986 4566889999999975
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=269.10 Aligned_cols=212 Identities=41% Similarity=0.747 Sum_probs=169.2
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++++|||||||.||++.|+.+|++|++.|.+.++++|++||++++....+....+...+- |+ +.....++||....
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a--~~-~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDA--PP-DVEQNRYGWFSNNE 79 (230)
T ss_pred CCCceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccC--Cc-ccccchhhhhcccc
Confidence 4578999999999999999999999999999889999999999988655433211111110 11 00111567776321
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhh---hhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWER---LKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~---~~~~~~l~~v 526 (608)
. ......++++++++|.+.|.+.||+|||+||||||+||..++...+. ....++++++
T Consensus 80 -------------~------~~~~~~~~eesl~yl~~~i~enGPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~ 140 (230)
T KOG2551|consen 80 -------------A------SFTEYFGFEESLEYLEDYIKENGPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFA 140 (230)
T ss_pred -------------c------ccccccChHHHHHHHHHHHHHhCCCccccccchhHHHHHHhhcccccCCcccCCCCeEEE
Confidence 0 12346789999999999999999999999999999999999983332 1235789999
Q ss_pred EEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHH
Q 007311 527 ILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 527 IlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~ 602 (608)
|++||+.+.... .....+++|+|||.|+ .|.+||.+.++.|++.|++ ..++.|+|||+||+..++++.|.+
T Consensus 141 v~~SGf~~~~~~~~~~~~~~~i~~PSLHi~G~---~D~iv~~~~s~~L~~~~~~--a~vl~HpggH~VP~~~~~~~~i~~ 215 (230)
T KOG2551|consen 141 VFISGFKFPSKKLDESAYKRPLSTPSLHIFGE---TDTIVPSERSEQLAESFKD--ATVLEHPGGHIVPNKAKYKEKIAD 215 (230)
T ss_pred EEEecCCCCcchhhhhhhccCCCCCeeEEecc---cceeecchHHHHHHHhcCC--CeEEecCCCccCCCchHHHHHHHH
Confidence 999999987322 2356899999999999 8999999999999999998 599999999999999999999999
Q ss_pred HHHHhC
Q 007311 603 FLQRFL 608 (608)
Q Consensus 603 Fl~~~L 608 (608)
||..++
T Consensus 216 fi~~~~ 221 (230)
T KOG2551|consen 216 FIQSFL 221 (230)
T ss_pred HHHHHH
Confidence 998753
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=266.06 Aligned_cols=202 Identities=39% Similarity=0.687 Sum_probs=125.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+|++||||||+|||++.|+.|++.|++.|.+ .++|+|+|||++++ ++.++...............+.++|+....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~----~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 78 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVP----PGPGIEPFSSEAESAFGDPGPFYSWWDPDD 78 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE-------GGG-SS---HHHHHHHHTT--EESS---S
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccC----CcccccccccccccccCCCCcceeeeecCC
Confidence 5789999999999999999999999999998 99999999999883 111111000000000123456899988332
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhh---CCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLK---GEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~---~~~~l~~v 526 (608)
. .....++++++++|.+.+.+++|++||+||||||+||+.++.++++.. ...+++++
T Consensus 79 ~--------------------~~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~ 138 (212)
T PF03959_consen 79 D--------------------DHEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFA 138 (212)
T ss_dssp ---------------------SGGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEE
T ss_pred C--------------------cccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEE
Confidence 0 134578999999999999999999999999999999999998776533 35789999
Q ss_pred EEecCCCCCcccc----ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHH
Q 007311 527 ILCSGFALHSAEF----EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEI 600 (608)
Q Consensus 527 IlisG~~~~~~~~----~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i 600 (608)
|++||+.|..... ...+|++|+|||+|+ +|.+++.+.+++|++.|.+. ..+++|++||.+|...++++++
T Consensus 139 V~~sg~~p~~~~~~~~~~~~~i~iPtlHv~G~---~D~~~~~~~s~~L~~~~~~~-~~v~~h~gGH~vP~~~~~~~~~ 212 (212)
T PF03959_consen 139 VFISGFPPPDPDYQELYDEPKISIPTLHVIGE---NDPVVPPERSEALAEMFDPD-ARVIEHDGGHHVPRKKEDVDKY 212 (212)
T ss_dssp EEES----EEE-GTTTT--TT---EEEEEEET---T-SSS-HHHHHHHHHHHHHH-EEEEEESSSSS----HHHHHH-
T ss_pred EEEcccCCCchhhhhhhccccCCCCeEEEEeC---CCCCcchHHHHHHHHhccCC-cEEEEECCCCcCcCChhhccCC
Confidence 9999999875531 356789999999999 89999999999999999987 8999999999999988777653
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.6e-22 Score=195.44 Aligned_cols=193 Identities=24% Similarity=0.317 Sum_probs=126.7
Q ss_pred CCCCccEEEEecCCCCChHHHHHHHHHHHH-H-ccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeee
Q 007311 368 VCRRKLRILCLHGFRQNASSFKGRTASLAK-K-LKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWF 445 (608)
Q Consensus 368 ~~~~~~~iLlLHG~G~na~~f~~~~~~L~~-~-L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 445 (608)
...++++||+|||+|+|++.|. .+.. . ..+.+.+|+++||........ .....+||
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~----~~~~~~~~~~~~~~i~p~ap~~~~~~~~------------------g~~~~~Wf 67 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFA----LLAELNLALPNTRFISPRAPSRPVTVPG------------------GYRMPAWF 67 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHH----HHHHHHTCSTTEEEEEE---EEE-GGGT------------------T-EEE-SS
T ss_pred CCCCceEEEEECCCCCCcchhH----HHHhhcccCCceEEEeccCCCCCccccc------------------ccCCCcee
Confidence 3466789999999999997776 3333 1 235799999999974432110 01134999
Q ss_pred ccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh------CCceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 446 VAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE------GPFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~------~~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
+.... ++.. ....+++.++.++|.++|+.. .....|+||||||+||+.++++ .
T Consensus 68 ~~~~~---------------~~~~-~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~-----~ 126 (216)
T PF02230_consen 68 DIYDF---------------DPEG-PEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALR-----Y 126 (216)
T ss_dssp -BSCS---------------SSSS-EB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHC-----T
T ss_pred eccCC---------------Ccch-hhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHH-----c
Confidence 84321 1111 234678888888888888753 1345799999999999999994 4
Q ss_pred CCCccEEEEecCCCCCccccc---cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC
Q 007311 520 EIDFRFAILCSGFALHSAEFE---HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR 593 (608)
Q Consensus 520 ~~~l~~vIlisG~~~~~~~~~---~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~ 593 (608)
+.+++++|++||+.+...... ....++|++++||. +|++||.+.++++.+.+... ..++..++ +||.++.
T Consensus 127 p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~---~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~- 202 (216)
T PF02230_consen 127 PEPLAGVVALSGYLPPESELEDRPEALAKTPILIIHGD---EDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP- 202 (216)
T ss_dssp SSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEET---T-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-
T ss_pred CcCcCEEEEeeccccccccccccccccCCCcEEEEecC---CCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-
Confidence 678999999999998754321 22337999999999 89999999999999999864 35677777 7999954
Q ss_pred hhhHHHHHHHHHHhC
Q 007311 594 SPYIDEIKSFLQRFL 608 (608)
Q Consensus 594 ~~~~~~i~~Fl~~~L 608 (608)
+++.++.+||++.+
T Consensus 203 -~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 203 -EELRDLREFLEKHI 216 (216)
T ss_dssp -HHHHHHHHHHHHH-
T ss_pred -HHHHHHHHHHhhhC
Confidence 89999999998764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=190.71 Aligned_cols=186 Identities=23% Similarity=0.259 Sum_probs=142.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+..++||+|||+|+|..+|. ++.+.+.+++.++++++|.... + ....++|++
T Consensus 16 p~~~~iilLHG~Ggde~~~~----~~~~~~~P~~~~is~rG~v~~~----g-----------------~~~~f~~~~--- 67 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLV----PLPELILPNATLVSPRGPVAEN----G-----------------GPRFFRRYD--- 67 (207)
T ss_pred CCCcEEEEEecCCCChhhhh----hhhhhcCCCCeEEcCCCCcccc----C-----------------cccceeecC---
Confidence 44568999999999999999 6777777889999999996633 1 124677776
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.+.||..+. ........+.|.....+.+ ....++||||||+||+.++++. +..++++
T Consensus 68 ------------~~~~d~edl---~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~-----~~~~~~a 127 (207)
T COG0400 68 ------------EGSFDQEDL---DLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL-----PGLFAGA 127 (207)
T ss_pred ------------CCccchhhH---HHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC-----chhhccc
Confidence 334542222 2223333333444444433 3567999999999999999954 5689999
Q ss_pred EEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 527 ILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 527 IlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
|+++|.+|+..........+|+|++||+ .|++||...+.++++.+... .+++.++++||.++. ++++++.+|+
T Consensus 128 il~~g~~~~~~~~~~~~~~~pill~hG~---~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~--e~~~~~~~wl 202 (207)
T COG0400 128 ILFSGMLPLEPELLPDLAGTPILLSHGT---EDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPP--EELEAARSWL 202 (207)
T ss_pred hhcCCcCCCCCccccccCCCeEEEeccC---cCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCH--HHHHHHHHHH
Confidence 9999999988765567788999999999 89999999999999999864 466777889999966 8999999999
Q ss_pred HHhC
Q 007311 605 QRFL 608 (608)
Q Consensus 605 ~~~L 608 (608)
.+.+
T Consensus 203 ~~~~ 206 (207)
T COG0400 203 ANTL 206 (207)
T ss_pred Hhcc
Confidence 8753
|
|
| >cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-20 Score=161.82 Aligned_cols=101 Identities=52% Similarity=1.035 Sum_probs=84.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
|+.|+++++.+++++ ++++|||||++.||+.|||+| +++.+...+.+++..+.+....+++++
T Consensus 1 ~~~is~~~l~~~~~~-------------~~~~iiDvR~~~e~~~ghi~g----A~~ip~~~~~~~~~~~~~~~~~~~~~~ 63 (101)
T cd01518 1 GTYLSPAEWNELLED-------------PEVVLLDVRNDYEYDIGHFKG----AVNPDVDTFREFPFWLDENLDLLKGKK 63 (101)
T ss_pred CCcCCHHHHHHHHcC-------------CCEEEEEcCChhhhhcCEecc----ccCCCcccHhHhHHHHHhhhhhcCCCE
Confidence 578999999999965 478999999999999999999 566554444444444444334478999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||+||.+|.||..|+.+|+++ ||+|||+|.|||.+|++
T Consensus 64 ivvyC~~G~rs~~a~~~L~~~--G~~~v~~l~GG~~~W~~ 101 (101)
T cd01518 64 VLMYCTGGIRCEKASAYLKER--GFKNVYQLKGGILKYLE 101 (101)
T ss_pred EEEECCCchhHHHHHHHHHHh--CCcceeeechhHHHHhC
Confidence 999999999999999999987 99999999999999975
|
This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=175.58 Aligned_cols=186 Identities=18% Similarity=0.148 Sum_probs=129.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++++||+|||+|+|++.|......|.+.+. .+.++++++|.... ..++++||+...
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~-~~~~i~~~g~~~~~----------------------~~~g~~W~~~~~ 70 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFP-DALVVSVGGPEPSG----------------------NGAGRQWFSVQG 70 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCC-CCEEECCCCCCCcC----------------------CCCCcccccCCC
Confidence 4457899999999999999966655655433 47899999984321 113678987321
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHh----Hh---CCceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS----QE---GPFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~----~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
. +. .....++.+++..|.+.++ +. ...++|+||||||++|+.++... +..
T Consensus 71 ~---------------~~---~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----~~~ 127 (232)
T PRK11460 71 I---------------TE---DNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----PGL 127 (232)
T ss_pred C---------------Cc---cchHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----CCc
Confidence 1 00 0112233444343333332 22 23568999999999999988743 445
Q ss_pred ccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEE-eCCCCcCCCChhhHHH
Q 007311 523 FRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIE-HDCGHIIPTRSPYIDE 599 (608)
Q Consensus 523 l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~-~~gGH~ip~~~~~~~~ 599 (608)
++++|+++|..+... ......+|+|++||+ +|++||.+.++++.+.++... ++... .++||.+.. ++++.
T Consensus 128 ~~~vv~~sg~~~~~~--~~~~~~~pvli~hG~---~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~--~~~~~ 200 (232)
T PRK11460 128 AGRVIAFSGRYASLP--ETAPTATTIHLIHGG---EDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP--RLMQF 200 (232)
T ss_pred ceEEEEecccccccc--ccccCCCcEEEEecC---CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH--HHHHH
Confidence 778899999865332 233568999999999 899999999999999997532 44554 457999954 89999
Q ss_pred HHHHHHHhC
Q 007311 600 IKSFLQRFL 608 (608)
Q Consensus 600 i~~Fl~~~L 608 (608)
+.+||.++|
T Consensus 201 ~~~~l~~~l 209 (232)
T PRK11460 201 ALDRLRYTV 209 (232)
T ss_pred HHHHHHHHc
Confidence 999998765
|
|
| >cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.9e-17 Score=140.00 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=75.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHH----Hh-hhhhcCC
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWI----DN-NAEQLQG 206 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~----~~-~~~~~k~ 206 (608)
|+++|+.++++++ ++++|||||++.||+.|||+| +++.+... +...+ ++ ....+++
T Consensus 1 is~~el~~~l~~~------------~~~~liDvR~~~e~~~ghi~g----a~~ip~~~---~~~~~~~~~~~~~~~~~~~ 61 (100)
T cd01523 1 LDPEDLYARLLAG------------QPLFILDVRNESDYERWKIDG----ENNTPYFD---PYFDFLEIEEDILDQLPDD 61 (100)
T ss_pred CCHHHHHHHHHcC------------CCcEEEEeCCHHHHhhcccCC----Cccccccc---chHHHHHhhHHHHhhCCCC
Confidence 5899999999763 568999999999999999999 55554322 22111 11 1234688
Q ss_pred CeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 207 KHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 207 k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
++||+||.+|.||..|+..|++. ||+ ||+|+||+.+|.
T Consensus 62 ~~ivv~C~~G~rs~~aa~~L~~~--G~~-~~~l~GG~~~W~ 99 (100)
T cd01523 62 QEVTVICAKEGSSQFVAELLAER--GYD-VDYLAGGMKAWS 99 (100)
T ss_pred CeEEEEcCCCCcHHHHHHHHHHc--Cce-eEEeCCcHHhhc
Confidence 99999999999999999999987 998 999999999996
|
This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain. |
| >cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2 | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=140.53 Aligned_cols=99 Identities=20% Similarity=0.247 Sum_probs=80.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++++.++++++ .+.+|||||++.||..|||+| +++.+. .++..+++. +...++++
T Consensus 9 ~~~i~~~~l~~~~~~~------------~~~~liDvR~~~e~~~ghIpg----ainip~---~~l~~~~~~-l~~~~~~~ 68 (109)
T cd01533 9 TPSVSADELAALQARG------------APLVVLDGRRFDEYRKMTIPG----SVSCPG---AELVLRVGE-LAPDPRTP 68 (109)
T ss_pred CCcCCHHHHHHHHhcC------------CCcEEEeCCCHHHHhcCcCCC----ceeCCH---HHHHHHHHh-cCCCCCCe
Confidence 4578999999999753 357899999999999999999 666553 334444433 22346889
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCc-EEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFEN-VFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~n-V~~L~GGi~~w~~~ 249 (608)
||+||.+|.|+..|+..|++. ||+| |++|.||+.+|...
T Consensus 69 ivv~C~~G~rs~~a~~~L~~~--G~~~~v~~l~gG~~~W~~~ 108 (109)
T cd01533 69 IVVNCAGRTRSIIGAQSLINA--GLPNPVAALRNGTQGWTLA 108 (109)
T ss_pred EEEECCCCchHHHHHHHHHHC--CCCcceeEecCCHHHHHhc
Confidence 999999999999999999987 9998 99999999999863
|
This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue. |
| >cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2 | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-16 Score=136.34 Aligned_cols=99 Identities=24% Similarity=0.406 Sum_probs=79.6
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
|+++|+.++++.. ..++++||||+..||+.+||+| +++.+.. ++..+++......++++||+
T Consensus 2 i~~~~l~~~~~~~-----------~~~~~iiDvR~~~e~~~~hI~g----a~~ip~~---~~~~~~~~~~~~~~~~~vv~ 63 (101)
T cd01528 2 ISVAELAEWLADE-----------REEPVLIDVREPEELEIAFLPG----FLHLPMS---EIPERSKELDSDNPDKDIVV 63 (101)
T ss_pred CCHHHHHHHHhcC-----------CCCCEEEECCCHHHHhcCcCCC----CEecCHH---HHHHHHHHhcccCCCCeEEE
Confidence 7899999999751 1368999999999999999999 5655533 33344433222246899999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
||.+|.|+..++.+|++. ||++|+.|+||+.+|.+.+
T Consensus 64 ~c~~g~rs~~~~~~l~~~--G~~~v~~l~GG~~~w~~~~ 100 (101)
T cd01528 64 LCHHGGRSMQVAQWLLRQ--GFENVYNLQGGIDAWSLEV 100 (101)
T ss_pred EeCCCchHHHHHHHHHHc--CCccEEEecCCHHHHhhhc
Confidence 999999999999999987 9999999999999998765
|
Subgroup 2 includes uncharacterized putative rhodanese-related domains. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-15 Score=143.92 Aligned_cols=188 Identities=21% Similarity=0.244 Sum_probs=139.6
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++.+||+|||.|++...|. .+.+.|+ +++++|+|.||......+. .....+||+...
T Consensus 2 h~atIi~LHglGDsg~~~~----~~~~~l~l~NiKwIcP~aP~rpvt~~~------------------G~~~~aWfd~~~ 59 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWA----QFLKQLPLPNIKWICPTAPSRPVTLNG------------------GAFMNAWFDIME 59 (206)
T ss_pred ceEEEEEEecCCCCCccHH----HHHHcCCCCCeeEEcCCCCCCcccccC------------------CCcccceeccee
Confidence 4668999999999999998 6666677 7899999999966543332 123567999443
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC------CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG------PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~------~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
.. +. .+...+++..+.+.+...++++. ...+|.||||||++|+.++..+ +..+
T Consensus 60 ~~---------------~~-~~~d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~-----~~~l 118 (206)
T KOG2112|consen 60 LS---------------SD-APEDEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY-----PKAL 118 (206)
T ss_pred eC---------------cc-cchhhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc-----cccc
Confidence 21 11 11135678888888888888752 2346889999999999999844 5678
Q ss_pred cEEEEecCCCCCcccc----ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEeCC-CCcCCCChhh
Q 007311 524 RFAILCSGFALHSAEF----EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEHDC-GHIIPTRSPY 596 (608)
Q Consensus 524 ~~vIlisG~~~~~~~~----~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~g-GH~ip~~~~~ 596 (608)
.+++..+|+.|..... ......+|+++.||+ .|++||...++...+.+.... .+...+.+ +|..- +.+
T Consensus 119 ~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~---~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~--~~e 193 (206)
T KOG2112|consen 119 GGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGT---ADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS--PQE 193 (206)
T ss_pred ceeeccccccccchhhccCCccccCcchhheeccc---CCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc--HHH
Confidence 8999999999855431 111227999999999 999999999999888887543 33344444 89874 479
Q ss_pred HHHHHHHHHH
Q 007311 597 IDEIKSFLQR 606 (608)
Q Consensus 597 ~~~i~~Fl~~ 606 (608)
++++..|+.+
T Consensus 194 ~~~~~~~~~~ 203 (206)
T KOG2112|consen 194 LDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHHH
Confidence 9999999976
|
|
| >cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-16 Score=140.89 Aligned_cols=104 Identities=18% Similarity=0.323 Sum_probs=82.8
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh-------
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN------- 200 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~------- 200 (608)
....|+++|+.+++++. ++++|||||++.||+.|||+| +++.+...+ ..+....
T Consensus 6 ~~~~is~~el~~~~~~~------------~~~~ivDvR~~~e~~~~hIpg----ai~ip~~~~---~~~~~~~~~~~~~~ 66 (122)
T cd01526 6 PEERVSVKDYKNILQAG------------KKHVLLDVRPKVHFEICRLPE----AINIPLSEL---LSKAAELKSLQELP 66 (122)
T ss_pred cccccCHHHHHHHHhCC------------CCeEEEEcCCHHHhhcccCCC----CeEccHHHH---hhhhhhhhhhhhcc
Confidence 35678999999999763 478999999999999999999 555553322 2222111
Q ss_pred hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCC-CcEEEcCccHHHHHHhCCC
Q 007311 201 AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGF-ENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 201 ~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf-~nV~~L~GGi~~w~~~~~~ 252 (608)
....++++|++||.+|.|+.+++..|++. || ++|+.|+|||.+|.+++..
T Consensus 67 ~~~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~~~v~~l~GG~~~W~~~~~~ 117 (122)
T cd01526 67 LDNDKDSPIYVVCRRGNDSQTAVRKLKEL--GLERFVRDIIGGLKAWADKVDP 117 (122)
T ss_pred cccCCCCcEEEECCCCCcHHHHHHHHHHc--CCccceeeecchHHHHHHHhCc
Confidence 12367899999999999999999999997 99 7999999999999988653
|
This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains. |
| >cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3 | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.2e-16 Score=133.51 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=74.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
|+++|+.+++++. +++++|||||++.||+.|||+| +++.+.. ++..+... ....++++||+
T Consensus 1 is~~~l~~~~~~~-----------~~~~~liDvR~~~e~~~ghipg----a~~ip~~---~l~~~~~~-~~~~~~~~iv~ 61 (95)
T cd01534 1 IGAAELARWAAEG-----------DRTVYRFDVRTPEEYEAGHLPG----FRHTPGG---QLVQETDH-FAPVRGARIVL 61 (95)
T ss_pred CCHHHHHHHHHcC-----------CCCeEEEECCCHHHHHhCCCCC----cEeCCHH---HHHHHHHH-hcccCCCeEEE
Confidence 5889999999762 1368899999999999999999 5665532 23222222 12236789999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
||.+|.||..++.+|+.. ||+ |+.|.||+.+|+
T Consensus 62 ~c~~G~rs~~aa~~L~~~--G~~-v~~l~GG~~~W~ 94 (95)
T cd01534 62 ADDDGVRADMTASWLAQM--GWE-VYVLEGGLAAAL 94 (95)
T ss_pred ECCCCChHHHHHHHHHHc--CCE-EEEecCcHHHhc
Confidence 999999999999999886 998 999999999996
|
This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue. |
| >cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1 | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-15 Score=136.85 Aligned_cols=99 Identities=23% Similarity=0.397 Sum_probs=78.9
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh-ccccCCCCccccCcccccCCC------chHHHHhhhhhc
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR-IGKFRTPSVETLDPEIRQFSD------LPTWIDNNAEQL 204 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~-~Gh~~g~~~~~l~~~~~~~~~------~~~~~~~~~~~~ 204 (608)
||++|+.+++++. +++++||||+++||+ .|||++ +++.+...+.+ +..++... ..
T Consensus 1 is~~el~~~l~~~------------~~~~vIDvR~~~e~~~~ghIpg----A~~ip~~~~~~~~~~~~~~~~l~~~--~~ 62 (117)
T cd01522 1 LTPAEAWALLQAD------------PQAVLVDVRTEAEWKFVGGVPD----AVHVAWQVYPDMEINPNFLAELEEK--VG 62 (117)
T ss_pred CCHHHHHHHHHhC------------CCeEEEECCCHHHHhcccCCCC----ceecchhhccccccCHHHHHHHHhh--CC
Confidence 5899999999863 579999999999999 999999 55554332221 12222221 25
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
++++||+||.+|.||.+++..|++. ||+||+.+.|||.+|...-
T Consensus 63 ~~~~ivv~C~~G~rs~~aa~~L~~~--G~~~v~~l~gG~~~~~~~~ 106 (117)
T cd01522 63 KDRPVLLLCRSGNRSIAAAEAAAQA--GFTNVYNVLEGFEGDLDAA 106 (117)
T ss_pred CCCeEEEEcCCCccHHHHHHHHHHC--CCCeEEECcCceecCCCCC
Confidence 8899999999999999999999987 9999999999999998653
|
This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins. |
| >cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=136.91 Aligned_cols=97 Identities=22% Similarity=0.357 Sum_probs=74.0
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC---------------------
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF--------------------- 190 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~--------------------- 190 (608)
||++|+++++++ +++|||||++.||+.|||+|+ ++.+....
T Consensus 1 ~s~~el~~~l~~--------------~~~iiDvR~~~e~~~ghIpgA----inip~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (128)
T cd01520 1 ITAEDLLALRKA--------------DGPLIDVRSPKEFFEGHLPGA----INLPLLDDEERALVGTLYKQQGREAAIEL 62 (128)
T ss_pred CCHHHHHHHHhc--------------CCEEEECCCHHHhccCcCCCc----EEccCCChhHHHHhhhheeccCHHHHHHH
Confidence 689999999863 579999999999999999994 44432111
Q ss_pred ------CCchHHHHhh--hhhcCCCeEEEEcC-CCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 191 ------SDLPTWIDNN--AEQLQGKHVLMYCT-GGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 191 ------~~~~~~~~~~--~~~~k~k~Iv~yCt-gGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+++..+.+. ....++++||+||. +|.||..|+..|+.. || +|++|.|||.+|.+-
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~--G~-~v~~L~GG~~aw~~~ 127 (128)
T cd01520 63 GLELVSGKLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESL--GI-DVPLLEGGYKAYRKF 127 (128)
T ss_pred HHHHHhhhHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHc--CC-ceeEeCCcHHHHHhh
Confidence 0111222221 24578999999996 799999999999886 99 699999999999763
|
This CD includes several putative ATP /GTP binding proteins including E. coli YbbB. |
| >PRK00162 glpE thiosulfate sulfurtransferase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-15 Score=132.61 Aligned_cols=97 Identities=21% Similarity=0.344 Sum_probs=81.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
-+.++++|+.+++++ .++++||||++.||+.|||+| +++.+. .++..++.. ..++++
T Consensus 4 ~~~is~~el~~~l~~-------------~~~~ivDvR~~~e~~~ghi~g----A~~ip~---~~l~~~~~~---~~~~~~ 60 (108)
T PRK00162 4 FECINVEQAHQKLQE-------------GGAVLVDIRDPQSFAMGHAPG----AFHLTN---DSLGAFMRQ---ADFDTP 60 (108)
T ss_pred ccccCHHHHHHHHHc-------------CCCEEEEcCCHHHHhcCCCCC----CeECCH---HHHHHHHHh---cCCCCC
Confidence 457899999999975 358999999999999999999 555542 234444433 457899
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
|++||.+|.|+..++..|+.. ||+||+.|+||+.+|.+..
T Consensus 61 ivv~c~~g~~s~~a~~~L~~~--G~~~v~~l~GG~~~w~~~~ 100 (108)
T PRK00162 61 VMVMCYHGNSSQGAAQYLLQQ--GFDVVYSIDGGFEAWRRTF 100 (108)
T ss_pred EEEEeCCCCCHHHHHHHHHHC--CchheEEecCCHHHHHhcC
Confidence 999999999999999999987 9999999999999998763
|
|
| >cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-15 Score=129.69 Aligned_cols=93 Identities=23% Similarity=0.413 Sum_probs=77.6
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc--cccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI--GKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~--Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
+|+++++.++++.+ .+++|||||+..||+. |||+| +++.+.. ++..++. ..+++++
T Consensus 1 ~i~~~~~~~~~~~~------------~~~~ivDvR~~~e~~~~~~hi~g----a~~ip~~---~~~~~~~---~~~~~~~ 58 (96)
T cd01444 1 RISVDELAELLAAG------------EAPVLLDVRDPASYAALPDHIPG----AIHLDED---SLDDWLG---DLDRDRP 58 (96)
T ss_pred CcCHHHHHHHHhcC------------CCcEEEECCCHHHHhcccCCCCC----CeeCCHH---HHHHHHh---hcCCCCC
Confidence 47899999998752 4689999999999999 99999 5655532 3444433 2458999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
||+||.+|.|+..++..|+.. ||+||+.|+||+.+|.
T Consensus 59 ivv~c~~g~~s~~a~~~l~~~--G~~~v~~l~gG~~~w~ 95 (96)
T cd01444 59 VVVYCYHGNSSAQLAQALREA--GFTDVRSLAGGFEAWR 95 (96)
T ss_pred EEEEeCCCChHHHHHHHHHHc--CCceEEEcCCCHHHhc
Confidence 999999999999999999997 9999999999999996
|
Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.1e-14 Score=144.65 Aligned_cols=168 Identities=17% Similarity=0.131 Sum_probs=117.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||+|++...|. .+.+.|.+.++++.+|.| +.. ....+ .
T Consensus 26 ~plvllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G-------------------~S~~~--~--- 69 (276)
T TIGR02240 26 TPLLIFNGIGANLELVF----PFIEALDPDLEVIAFDVP--------GVG-------------------GSSTP--R--- 69 (276)
T ss_pred CcEEEEeCCCcchHHHH----HHHHHhccCceEEEECCC--------CCC-------------------CCCCC--C---
Confidence 56999999999999998 777777778999999988 110 00000 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
....++...+.+.++++..+ ....|+|||+||.+|+.+|.+.+ ..++++|++++
T Consensus 70 --------------------~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p-----~~v~~lvl~~~ 124 (276)
T TIGR02240 70 --------------------HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYP-----ERCKKLILAAT 124 (276)
T ss_pred --------------------CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCH-----HHhhheEEecc
Confidence 01134555566666666654 34579999999999999998653 34555555543
Q ss_pred CCCCc-------------------------------------c--c------------------------------cccC
Q 007311 532 FALHS-------------------------------------A--E------------------------------FEHR 542 (608)
Q Consensus 532 ~~~~~-------------------------------------~--~------------------------------~~~~ 542 (608)
..... . . ....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 204 (276)
T TIGR02240 125 AAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLH 204 (276)
T ss_pred CCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhh
Confidence 32000 0 0 0124
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.+++|+|+++|+ +|+++|.+.++++++.+.+ .+++..++||.++.+.+ +.+.|.+|+.+
T Consensus 205 ~i~~P~lii~G~---~D~~v~~~~~~~l~~~~~~--~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 205 KIQQPTLVLAGD---DDPIIPLINMRLLAWRIPN--AELHIIDDGHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred cCCCCEEEEEeC---CCCcCCHHHHHHHHHhCCC--CEEEEEcCCCchhhccHHHHHHHHHHHHHH
Confidence 788999999999 8999999999999999886 45555567999877643 67788888765
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.4e-15 Score=129.70 Aligned_cols=97 Identities=22% Similarity=0.356 Sum_probs=74.5
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC-------CCchHHHHhhhhhc
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF-------SDLPTWIDNNAEQL 204 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~-------~~~~~~~~~~~~~~ 204 (608)
||++++++++++. .++++|||||+..||+.|||+|+ ++.+...+ ..++. .. .+...
T Consensus 1 is~~~l~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpgA----~~ip~~~~~~~~~~~~~~~~-~~-~~~~~ 63 (105)
T cd01525 1 ISVYDVIRLLDNS-----------PAKLAAVDIRSSPDFRRGHIEGS----INIPFSSVFLKEGELEQLPT-VP-RLENY 63 (105)
T ss_pred CCHHHHHHHHhCC-----------CCCeEEEECCCHHHHhCCccCCC----EeCCHHHhcccccccccccc-hH-HHHhh
Confidence 5899999999752 14689999999999999999994 44432211 12221 11 12223
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
++++||+||.+|.|+..++..|+.. ||+|||.|.||+.+|+
T Consensus 64 ~~~~vv~~c~~g~~s~~~a~~L~~~--G~~~v~~l~GG~~a~~ 104 (105)
T cd01525 64 KGKIIVIVSHSHKHAALFAAFLVKC--GVPRVCILDGGINALK 104 (105)
T ss_pred cCCeEEEEeCCCccHHHHHHHHHHc--CCCCEEEEeCcHHHhc
Confidence 6889999999999999999999987 9999999999999995
|
Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD. |
| >cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.9e-15 Score=131.57 Aligned_cols=96 Identities=24% Similarity=0.398 Sum_probs=73.9
Q ss_pred CHHHHHHHHH-ccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC----chHHHHhhh---hhc
Q 007311 133 SAVEFHSILQ-STGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD----LPTWIDNNA---EQL 204 (608)
Q Consensus 133 sp~e~~~~l~-~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~----~~~~~~~~~---~~~ 204 (608)
|++++.++++ . ++++|||||++.||+.|||++ +++.+...+.+ .+..+.+.. ...
T Consensus 2 ~~~~~~~~l~~~-------------~~~~iiDvR~~~e~~~ghIpg----A~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (106)
T cd01519 2 SFEEVKNLPNPH-------------PNKVLIDVREPEELKTGKIPG----AINIPLSSLPDALALSEEEFEKKYGFPKPS 64 (106)
T ss_pred cHHHHHHhcCCC-------------CCEEEEECCCHHHHhcCcCCC----cEEechHHhhhhhCCCHHHHHHHhcccCCC
Confidence 6788888886 3 579999999999999999999 45444322211 011222211 235
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
++++||+||.+|.|+.+++.+|+.. ||+||+.|.||+.+|.
T Consensus 65 ~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~~~Gg~~~W~ 105 (106)
T cd01519 65 KDKELIFYCKAGVRSKAAAELARSL--GYENVGNYPGSWLDWA 105 (106)
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHc--CCccceecCCcHHHHc
Confidence 7899999999999999999999987 9999999999999995
|
This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized. |
| >PLN02160 thiosulfate sulfurtransferase | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.7e-15 Score=135.01 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=77.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC---CCc--hHHHHhhhh-
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF---SDL--PTWIDNNAE- 202 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~---~~~--~~~~~~~~~- 202 (608)
-..++++|+.+++++ +.+|||||++.||..|||+|+.+ ++.+...+ .++ +..+....+
T Consensus 14 ~~~i~~~e~~~~~~~--------------~~~lIDVR~~~E~~~ghIpgA~~--iniP~~~~~~~~~l~~~~~~~~~~~~ 77 (136)
T PLN02160 14 VVSVDVSQAKTLLQS--------------GHQYLDVRTQDEFRRGHCEAAKI--VNIPYMLNTPQGRVKNQEFLEQVSSL 77 (136)
T ss_pred eeEeCHHHHHHHHhC--------------CCEEEECCCHHHHhcCCCCCcce--ecccchhcCcccccCCHHHHHHHHhc
Confidence 457899999999864 35899999999999999999521 33332100 111 122222122
Q ss_pred hcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 203 QLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 203 ~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
..++++||+||.+|.||..|+..|++. ||++||+|.||+.+|.++
T Consensus 78 ~~~~~~IivyC~sG~RS~~Aa~~L~~~--G~~~v~~l~GG~~~W~~~ 122 (136)
T PLN02160 78 LNPADDILVGCQSGARSLKATTELVAA--GYKKVRNKGGGYLAWVDH 122 (136)
T ss_pred cCCCCcEEEECCCcHHHHHHHHHHHHc--CCCCeeecCCcHHHHhhC
Confidence 357899999999999999999999987 999999999999999875
|
|
| >cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.6e-15 Score=134.84 Aligned_cols=105 Identities=17% Similarity=0.327 Sum_probs=78.3
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh---hhhcCCC
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN---AEQLQGK 207 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~---~~~~k~k 207 (608)
.|+++|+.+++++.. +...++++|||||++.||+.|||+| +++.+.. .++...+.+. +..++++
T Consensus 3 ~Is~~el~~~l~~~~-------~~~~~~~~liDvR~~~e~~~ghI~g----A~~ip~~--~~l~~~~~~~~~~~~~~~~~ 69 (121)
T cd01530 3 RISPETLARLLQGKY-------DNFFDKYIIIDCRFPYEYNGGHIKG----AVNLSTK--DELEEFFLDKPGVASKKKRR 69 (121)
T ss_pred ccCHHHHHHHHhccc-------ccCCCCEEEEECCCHHHHhCCcCCC----CEeCCcH--HHHHHHHHHhhcccccCCCC
Confidence 689999999997520 0012468999999999999999999 5554421 1233322211 1246899
Q ss_pred eEEEEcC-CCccHHHHHHHHHhcC----------CCCCcEEEcCccHHHHHH
Q 007311 208 HVLMYCT-GGIRCEMASAYVRSKG----------AGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 208 ~Iv~yCt-gGiR~~~a~~~L~~~~----------~Gf~nV~~L~GGi~~w~~ 248 (608)
+||+||. +|.|+.+|+.+|++.+ .||.+||.|+|||.+|.+
T Consensus 70 ~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~~ 121 (121)
T cd01530 70 VLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFFE 121 (121)
T ss_pred EEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhcC
Confidence 9999996 9999999999999731 389999999999999953
|
They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR). |
| >cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.3e-15 Score=130.66 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=76.1
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
.+|+++|+++++... .+++++||||+. ||..|||+| +++.+...+......+.+.....++++|
T Consensus 2 ~~is~~~l~~~~~~~-----------~~~~~iiDvR~~-e~~~~hi~g----A~~ip~~~l~~~~~~~~~~~~~~~~~~i 65 (113)
T cd01531 2 SYISPAQLKGWIRNG-----------RPPFQVVDVRDE-DYAGGHIKG----SWHYPSTRFKAQLNQLVQLLSGSKKDTV 65 (113)
T ss_pred CcCCHHHHHHHHHcC-----------CCCEEEEEcCCc-ccCCCcCCC----CEecCHHHHhhCHHHHHHHHhcCCCCeE
Confidence 468999999999652 135789999999 999999999 5554433332222222222222578899
Q ss_pred EEEcC-CCccHHHHHHHHHhc----C--CCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCT-GGIRCEMASAYVRSK----G--AGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCt-gGiR~~~a~~~L~~~----~--~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||. +|.|+..|+..|.+. . .||+|||.|.|||.+|.+.
T Consensus 66 v~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~ 112 (113)
T cd01531 66 VFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS 112 (113)
T ss_pred EEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence 99997 889999998877541 0 2999999999999999875
|
Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs. |
| >cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-14 Score=126.31 Aligned_cols=93 Identities=15% Similarity=0.231 Sum_probs=76.3
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEE
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVL 210 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv 210 (608)
.++++|+.+++++ +.+|||||+..||..|||+| +++.+...+.+ . ....+++++||
T Consensus 3 ~i~~~el~~~~~~--------------~~~liDvR~~~e~~~~hi~g----a~~ip~~~~~~---~---~~~~~~~~~iv 58 (99)
T cd01527 3 TISPNDACELLAQ--------------GAVLVDIREPDEYLRERIPG----ARLVPLSQLES---E---GLPLVGANAII 58 (99)
T ss_pred ccCHHHHHHHHHC--------------CCEEEECCCHHHHHhCcCCC----CEECChhHhcc---c---ccCCCCCCcEE
Confidence 5799999999875 37899999999999999999 55544322221 1 12346789999
Q ss_pred EEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 211 MYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 211 ~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+||.+|.|+..++..|++. ||.||+.|.||+.+|...
T Consensus 59 ~~c~~g~~s~~~~~~L~~~--g~~~v~~l~gG~~~W~~~ 95 (99)
T cd01527 59 FHCRSGMRTQQNAERLAAI--SAGEAYVLEGGLDAWKAA 95 (99)
T ss_pred EEeCCCchHHHHHHHHHHc--CCccEEEeeCCHHHHHHC
Confidence 9999999999999999987 999999999999999864
|
This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases. |
| >cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-14 Score=126.02 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=66.8
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||||++.||+.|||+| +++.+...+.....+++......++++||+||.+|.|+..++.+|+.. ||+||
T Consensus 11 ~~~~iiDvR~~~~~~~~hIpg----A~~ip~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v 84 (96)
T cd01529 11 PGTALLDVRAEDEYAAGHLPG----KRSIPGAALVLRSQELQALEAPGRATRYVLTCDGSLLARFAAQELLAL--GGKPV 84 (96)
T ss_pred CCeEEEeCCCHHHHcCCCCCC----cEeCCHHHhcCCHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHc--CCCCE
Confidence 678999999999999999999 555443333222233322112367899999999999999999999886 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
+.|.||+.+|.
T Consensus 85 ~~l~GG~~~W~ 95 (96)
T cd01529 85 ALLDGGTSAWV 95 (96)
T ss_pred EEeCCCHHHhc
Confidence 99999999995
|
This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=136.35 Aligned_cols=171 Identities=13% Similarity=0.117 Sum_probs=115.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++||++||+++++..|. .+.+.|.++++++.+|.| ... ..-..
T Consensus 12 ~~~~iv~lhG~~~~~~~~~----~~~~~l~~~~~vi~~D~~--------G~G-------------------~S~~~---- 56 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWA----PQLDVLTQRFHVVTYDHR--------GTG-------------------RSPGE---- 56 (257)
T ss_pred CCCEEEEEcCCCcchhHHH----HHHHHHHhccEEEEEcCC--------CCC-------------------CCCCC----
Confidence 3578999999999999998 555666667999999988 100 00000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. .....+++.++.+.++++..+ ....|+|+||||++|+.++...+ ..++++|++
T Consensus 57 --------------~------~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~v~~~i~~ 111 (257)
T TIGR03611 57 --------------L------PPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYP-----ERLLSLVLI 111 (257)
T ss_pred --------------C------cccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHCh-----HHhHHheee
Confidence 0 001234555666667776554 34579999999999999998543 357777777
Q ss_pred cCCCCCcc-----------------------------------------------------------------------c
Q 007311 530 SGFALHSA-----------------------------------------------------------------------E 538 (608)
Q Consensus 530 sG~~~~~~-----------------------------------------------------------------------~ 538 (608)
+++..... .
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (257)
T TIGR03611 112 NAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVS 191 (257)
T ss_pred cCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcH
Confidence 66432100 0
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+++++|+ +|.++|.+.++++++.+++. ..+...++||.+..+.+ ..+.|.+||+
T Consensus 192 ~~~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 192 ARLDRIQHPVLLIANR---DDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHhcccCccEEEEecC---cCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 0123678999999999 89999999999999988763 33344468999766433 4566666664
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-14 Score=127.16 Aligned_cols=103 Identities=20% Similarity=0.335 Sum_probs=79.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccccc----CCC-chHHHHhh--h
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ----FSD-LPTWIDNN--A 201 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~----~~~-~~~~~~~~--~ 201 (608)
-..++-++.+++++. +++++||||++.||..||++. +||.|... +.. -++.+.+. .
T Consensus 22 ~~sv~~~qvk~L~~~-------------~~~~llDVRepeEfk~gh~~~----siNiPy~~~~~~~~l~~~eF~kqvg~~ 84 (136)
T KOG1530|consen 22 PQSVSVEQVKNLLQH-------------PDVVLLDVREPEEFKQGHIPA----SINIPYMSRPGAGALKNPEFLKQVGSS 84 (136)
T ss_pred cEEEEHHHHHHHhcC-------------CCEEEEeecCHHHhhccCCcc----eEeccccccccccccCCHHHHHHhccc
Confidence 346788999999987 469999999999999999976 55554321 111 12222211 1
Q ss_pred hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 202 EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 202 ~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
....++.||+||.+|.|+-+|+..|.+. ||+||-++.||+.+|.+.-
T Consensus 85 kp~~d~eiIf~C~SG~Rs~~A~~~l~s~--Gyknv~ny~Gs~~~W~~k~ 131 (136)
T KOG1530|consen 85 KPPHDKEIIFGCASGVRSLKATKILVSA--GYKNVGNYPGSYLAWVDKG 131 (136)
T ss_pred CCCCCCcEEEEeccCcchhHHHHHHHHc--CcccccccCccHHHHHHcc
Confidence 2356789999999999999999999998 9999999999999999863
|
|
| >cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.3e-14 Score=122.40 Aligned_cols=89 Identities=24% Similarity=0.449 Sum_probs=73.3
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
++|+|+.++++ ++.++||+|+..||..|||+| +++.+.. ++..++. ...++++||+
T Consensus 1 ~~~~e~~~~~~--------------~~~~iiD~R~~~~~~~~hipg----A~~ip~~---~~~~~~~---~~~~~~~vvl 56 (90)
T cd01524 1 VQWHELDNYRA--------------DGVTLIDVRTPQEFEKGHIKG----AINIPLD---ELRDRLN---ELPKDKEIIV 56 (90)
T ss_pred CCHHHHHHHhc--------------CCCEEEECCCHHHHhcCCCCC----CEeCCHH---HHHHHHH---hcCCCCcEEE
Confidence 47899999883 467999999999999999999 5665532 2333332 2357889999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
||.+|.|+..++..|++. || +|+.|+||+.+|.
T Consensus 57 ~c~~g~~a~~~a~~L~~~--G~-~v~~l~GG~~~w~ 89 (90)
T cd01524 57 YCAVGLRGYIAARILTQN--GF-KVKNLDGGYKTYS 89 (90)
T ss_pred EcCCChhHHHHHHHHHHC--CC-CEEEecCCHHHhc
Confidence 999999999999999987 99 9999999999995
|
Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain. |
| >cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.9e-14 Score=127.16 Aligned_cols=103 Identities=17% Similarity=0.310 Sum_probs=73.1
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh---hhhcCC
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN---AEQLQG 206 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~---~~~~k~ 206 (608)
+.|+++|+++++++. .....++++|||||+. ||+.|||+| +++.+... +..++.+. ....+.
T Consensus 2 ~~is~~el~~~l~~~-------~~~~~~~~~iiDvR~~-ef~~ghipg----Ai~ip~~~---~~~~~~~~~~~~~~~~~ 66 (113)
T cd01443 2 KYISPEELVALLENS-------DSNAGKDFVVVDLRRD-DYEGGHIKG----SINLPAQS---CYQTLPQVYALFSLAGV 66 (113)
T ss_pred cccCHHHHHHHHhCC-------ccccCCcEEEEECCch-hcCCCcccC----ceecchhH---HHHHHHHHHHHhhhcCC
Confidence 468999999999751 0000136899999999 999999999 56555333 33333221 122467
Q ss_pred CeEEEEcCC-CccHHHHHHHHHh----cCCCCCcEEEcCccHHHHH
Q 007311 207 KHVLMYCTG-GIRCEMASAYVRS----KGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 207 k~Iv~yCtg-GiR~~~a~~~L~~----~~~Gf~nV~~L~GGi~~w~ 247 (608)
++||+||.+ |.|+..++.+|++ .|.||.+||+|.|||.+|.
T Consensus 67 ~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~ 112 (113)
T cd01443 67 KLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWY 112 (113)
T ss_pred CEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence 899999986 7999988877553 4445689999999999995
|
Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR). |
| >cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.1e-14 Score=124.16 Aligned_cols=95 Identities=25% Similarity=0.475 Sum_probs=74.5
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-hccccCCCCccccCcccccCCCchHHHHh-----hhhhcC
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-RIGKFRTPSVETLDPEIRQFSDLPTWIDN-----NAEQLQ 205 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~-----~~~~~k 205 (608)
|+++|+.+++++ ++.+|||||++.|+ ..|||+| +++.+.. .+..+.+. .....+
T Consensus 1 is~~el~~~~~~-------------~~~~iiDvR~~~~~~~~ghIpg----a~~ip~~---~~~~~~~~~~~~~~~~~~~ 60 (103)
T cd01447 1 LSPEDARALLGS-------------PGVLLVDVRDPRELERTGMIPG----AFHAPRG---MLEFWADPDSPYHKPAFAE 60 (103)
T ss_pred CCHHHHHHHHhC-------------CCeEEEECCCHHHHHhcCCCCC----cEEcccc---hhhhhcCccccccccCCCC
Confidence 578999999875 46899999999998 5799999 5554422 22222211 012458
Q ss_pred CCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 206 GKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 206 ~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
+++||+||.+|.|+..++..|+.. ||+||+.|.||+.+|.+
T Consensus 61 ~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~l~Gg~~~w~~ 101 (103)
T cd01447 61 DKPFVFYCASGWRSALAGKTLQDM--GLKPVYNIEGGFKDWKE 101 (103)
T ss_pred CCeEEEEcCCCCcHHHHHHHHHHc--ChHHhEeecCcHHHHhh
Confidence 899999999999999999999987 99999999999999964
|
This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=131.82 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=119.2
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
..+||||||.+|.++++ .|++.|. .++.+..|+.| ++. ..|-..-....+.|
T Consensus 16 ~AVLllHGFTGt~~Dvr----~Lgr~L~e~GyTv~aP~yp--------GHG--------~~~e~fl~t~~~DW------- 68 (243)
T COG1647 16 RAVLLLHGFTGTPRDVR----MLGRYLNENGYTVYAPRYP--------GHG--------TLPEDFLKTTPRDW------- 68 (243)
T ss_pred EEEEEEeccCCCcHHHH----HHHHHHHHCCceEecCCCC--------CCC--------CCHHHHhcCCHHHH-------
Confidence 67999999999999999 8888886 58899888877 111 00000000011223
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
|+++.+-...+.++.-+.+.|+|+||||.+|+.+|.+ .+++++|.+|.
T Consensus 69 -------------------------~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~-------~p~K~iv~m~a 116 (243)
T COG1647 69 -------------------------WEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYH-------YPPKKIVPMCA 116 (243)
T ss_pred -------------------------HHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhh-------CCccceeeecC
Confidence 2333333333332333566899999999999999994 35888999887
Q ss_pred CCCCccc---------------------------------------------------cccCCCCCCEEEEEcCCCCCCc
Q 007311 532 FALHSAE---------------------------------------------------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 532 ~~~~~~~---------------------------------------------------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
..-.... .....|..|++++.|+ +|+
T Consensus 117 ~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~---~D~ 193 (243)
T COG1647 117 PVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGR---QDE 193 (243)
T ss_pred CcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecc---cCC
Confidence 6543211 2346789999999999 899
Q ss_pred ccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCChh---hHHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEGCSVIIEHDC-GHIIPTRSP---YIDEIKSFLQ 605 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~---~~~~i~~Fl~ 605 (608)
.||.+.+..+++.......++.++.+ ||.|-.+.+ ..++|.+||+
T Consensus 194 mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 194 MVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred CCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 99999999999999877677777765 888866533 4566777765
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.8e-13 Score=133.30 Aligned_cols=171 Identities=16% Similarity=0.182 Sum_probs=118.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||++||++++...|. .+...|.+.++++++|.|- .. ...+..
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~----~~~~~l~~~~~vi~~D~~G--------~G------------------~s~~~~--- 60 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLG----VLARDLVNDHDIIQVDMRN--------HG------------------LSPRDP--- 60 (255)
T ss_pred CCCCCEEEECCCCCchhHHH----HHHHHHhhCCeEEEECCCC--------CC------------------CCCCCC---
Confidence 45678999999999999998 6666676679999999881 00 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
...+.+..+.+.++++..+ ....|+||||||++|+.+|.+. +..++++|+
T Consensus 61 ------------------------~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----~~~v~~lvl 111 (255)
T PRK10673 61 ------------------------VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALA-----PDRIDKLVA 111 (255)
T ss_pred ------------------------CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhC-----HhhcceEEE
Confidence 0134455556666666544 3358999999999999999854 456888888
Q ss_pred ecCCCCCc--------------------c--------------c---------------------------------ccc
Q 007311 529 CSGFALHS--------------------A--------------E---------------------------------FEH 541 (608)
Q Consensus 529 isG~~~~~--------------------~--------------~---------------------------------~~~ 541 (608)
+++.+... . . ...
T Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (255)
T PRK10673 112 IDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKI 191 (255)
T ss_pred EecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCccc
Confidence 75421110 0 0 012
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
..+++|+|+|+|+ +|+.++.+..+.+++.+++. ..++..++||..+.+.+ .++.|.+||..
T Consensus 192 ~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 192 PAWPHPALFIRGG---NSPYVTEAYRDDLLAQFPQA-RAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCCeEEEECC---CCCCCCHHHHHHHHHhCCCc-EEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 3457899999999 89999999999999998873 33445567999776543 56788888764
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.9e-13 Score=130.02 Aligned_cols=172 Identities=21% Similarity=0.274 Sum_probs=127.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++++|||-.|+++..|. +|...|+..++++.++.|= ...-+..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr----~W~~~lp~~iel~avqlPG----------------------------R~~r~~e-- 50 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFR----SWSRRLPADIELLAVQLPG----------------------------RGDRFGE-- 50 (244)
T ss_pred CCCceEEEecCCCCCHHHHH----HHHhhCCchhheeeecCCC----------------------------cccccCC--
Confidence 45678999999999999999 9999999999999999881 1111111
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....+++..++.|...|.. ..|+ .++||||||++|..+|.+.++... . ...+
T Consensus 51 ----------------------p~~~di~~Lad~la~el~~~~~d~P~-alfGHSmGa~lAfEvArrl~~~g~-~-p~~l 105 (244)
T COG3208 51 ----------------------PLLTDIESLADELANELLPPLLDAPF-ALFGHSMGAMLAFEVARRLERAGL-P-PRAL 105 (244)
T ss_pred ----------------------cccccHHHHHHHHHHHhccccCCCCe-eecccchhHHHHHHHHHHHHHcCC-C-cceE
Confidence 1234677777888777762 2344 899999999999999998876332 2 5555
Q ss_pred EEecCCCCCccc----------------------------------------------------cccCCCCCCEEEEEcC
Q 007311 527 ILCSGFALHSAE----------------------------------------------------FEHRSINCPSLHIFGG 554 (608)
Q Consensus 527 IlisG~~~~~~~----------------------------------------------------~~~~~i~~PvL~i~G~ 554 (608)
.+.++..|.... .....+.+|+..+.|+
T Consensus 106 fisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~ 185 (244)
T COG3208 106 FISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGE 185 (244)
T ss_pred EEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccC
Confidence 555555552210 1245889999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHH
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
+|..|..+....+.++.+.. .++..++|||+++.. ..+++.++|.+
T Consensus 186 ---~D~~vs~~~~~~W~~~t~~~-f~l~~fdGgHFfl~~--~~~~v~~~i~~ 231 (244)
T COG3208 186 ---KDHEVSRDELGAWREHTKGD-FTLRVFDGGHFFLNQ--QREEVLARLEQ 231 (244)
T ss_pred ---cchhccHHHHHHHHHhhcCC-ceEEEecCcceehhh--hHHHHHHHHHH
Confidence 89999999999999998865 899999999998773 34455555544
|
|
| >TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.6e-14 Score=132.52 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=76.2
Q ss_pred CCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh----hhhcc---------ccCCCCccccCcccccCCCc
Q 007311 127 NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY----ETRIG---------KFRTPSVETLDPEIRQFSDL 193 (608)
Q Consensus 127 ~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~----E~~~G---------h~~g~~~~~l~~~~~~~~~~ 193 (608)
.....|+++|+++++++ ++++|||||+.. |+..| ||+|+ ++.+...+.++
T Consensus 33 ~~~~~vs~~el~~~l~~-------------~~~~lIDVR~~~~~~~e~~~G~~~~~~~~~HIPGA----v~ip~~~~~~l 95 (162)
T TIGR03865 33 KGARVLDTEAAQALLAR-------------GPVALIDVYPRPPKPKNLLEGTVWRDEPRLNIPGS----LWLPNTGYGNL 95 (162)
T ss_pred CCccccCHHHHHHHHhC-------------CCcEEEECCCCccccccccccceeccccCCCCCCc----EEecccCCCCC
Confidence 34678999999999976 468899999865 45444 89994 43321112222
Q ss_pred h--------HHHHhhhhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 194 P--------TWIDNNAEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 194 ~--------~~~~~~~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
. ..+.+.....++++||+||.+|. ||.+++..|+.. ||+|||+|.||+.+|.++
T Consensus 96 ~~~~~~~~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~--G~~~V~~l~GG~~aW~~a 158 (162)
T TIGR03865 96 APAWQAYFRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAY--GYSNVYWYPDGTDGWQAA 158 (162)
T ss_pred CCchhHHHHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhc--CCcceEEecCCHHHHHHc
Confidence 2 11211112258999999999997 899999999987 999999999999999864
|
Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-12 Score=134.60 Aligned_cols=173 Identities=16% Similarity=0.105 Sum_probs=112.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..++.||++||+++++..|. .+.+.|. .++.++.+|.| ++. . +....
T Consensus 23 ~~~~~v~llHG~~~~~~~~~----~~~~~l~~~g~~via~D~~--------G~G------~-------S~~~~------- 70 (276)
T PHA02857 23 YPKALVFISHGAGEHSGRYE----ELAENISSLGILVFSHDHI--------GHG------R-------SNGEK------- 70 (276)
T ss_pred CCCEEEEEeCCCccccchHH----HHHHHHHhCCCEEEEccCC--------CCC------C-------CCCcc-------
Confidence 34567888899999999999 5566664 37999999988 110 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH----hC-CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ----EG-PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~----~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
.+ ..++...++.+.+.+.. .. ....|+|+||||++|+.+|.+. +..+
T Consensus 71 ----------------~~-------~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~-----p~~i 122 (276)
T PHA02857 71 ----------------MM-------IDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN-----PNLF 122 (276)
T ss_pred ----------------CC-------cCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC-----cccc
Confidence 00 01122222222222221 12 2247999999999999999743 4568
Q ss_pred cEEEEecCCCCCc--------------------------cc---------------------------------------
Q 007311 524 RFAILCSGFALHS--------------------------AE--------------------------------------- 538 (608)
Q Consensus 524 ~~vIlisG~~~~~--------------------------~~--------------------------------------- 538 (608)
+++|++++..... ..
T Consensus 123 ~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (276)
T PHA02857 123 TAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVR 202 (276)
T ss_pred ceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHH
Confidence 9999988742100 00
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh-----hHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP-----YIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~-----~~~~i~~Fl~~ 606 (608)
....++++|+|++||+ +|.++|.+.++++.+.+... .+++. .++||.+..+.+ ..+++.+||.+
T Consensus 203 ~~l~~i~~Pvliv~G~---~D~i~~~~~~~~l~~~~~~~-~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 203 KIIPKIKTPILILQGT---NNEISDVSGAYYFMQHANCN-REIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred HhcccCCCCEEEEecC---CCCcCChHHHHHHHHHccCC-ceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 1234788999999999 89999999999999887543 55544 457999876533 45677777765
|
|
| >cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.9e-14 Score=127.80 Aligned_cols=97 Identities=22% Similarity=0.258 Sum_probs=74.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc-----------cccCCCCccccCcccccCCC------ch
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI-----------GKFRTPSVETLDPEIRQFSD------LP 194 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~-----------Gh~~g~~~~~l~~~~~~~~~------~~ 194 (608)
++++++.+++++ ++++|||||+..||.. |||+| +++.+...+.. .+
T Consensus 1 ~s~~~l~~~l~~-------------~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpg----A~~~p~~~~~~~~~~~~~~ 63 (118)
T cd01449 1 VTAEEVLANLDS-------------GDVQLVDARSPERFRGEVPEPRPGLRSGHIPG----AVNIPWTSLLDEDGTFKSP 63 (118)
T ss_pred CCHHHHHHhcCC-------------CCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCC----CcccChHHhcCCCCCcCCH
Confidence 478899988864 4689999999999976 99999 44443222111 12
Q ss_pred HHHHhh---hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 195 TWIDNN---AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 195 ~~~~~~---~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
+.+.+. ....++++||+||++|.||..++..|+.. ||+||+.|.||+.+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~--G~~~v~~l~GG~~~W~ 117 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELL--GYKNVRLYDGSWSEWG 117 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHc--CCCCeeeeCChHHHhc
Confidence 233322 22357899999999999999999999987 9999999999999995
|
TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.8e-13 Score=137.47 Aligned_cols=174 Identities=17% Similarity=0.119 Sum_probs=116.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.||+|||++++...|. .+...|.+.++++++|.| +..+ ..+. .+
T Consensus 30 ~~vlllHG~~~~~~~w~----~~~~~L~~~~~vi~~DlpG~G~S----------------------~~~~-~~------- 75 (294)
T PLN02824 30 PALVLVHGFGGNADHWR----KNTPVLAKSHRVYAIDLLGYGYS----------------------DKPN-PR------- 75 (294)
T ss_pred CeEEEECCCCCChhHHH----HHHHHHHhCCeEEEEcCCCCCCC----------------------CCCc-cc-------
Confidence 57999999999999999 555555556899999988 1100 0000 00
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.++. .....+++..+.|.++|+..+ ....|+||||||++|+.+|+++ +..++++|+++
T Consensus 76 ------------~~~~----~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lili~ 134 (294)
T PLN02824 76 ------------SAPP----NSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDA-----PELVRGVMLIN 134 (294)
T ss_pred ------------cccc----cccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhC-----hhheeEEEEEC
Confidence 0000 011245566667777776543 4457999999999999999954 45688888877
Q ss_pred CCCCC----------cc----------------------------------------c----------------------
Q 007311 531 GFALH----------SA----------------------------------------E---------------------- 538 (608)
Q Consensus 531 G~~~~----------~~----------------------------------------~---------------------- 538 (608)
+.... .. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
T PLN02824 135 ISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVF 214 (294)
T ss_pred CCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHH
Confidence 53210 00 0
Q ss_pred -------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh--hHHHHHH
Q 007311 539 -------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP--YIDEIKS 602 (608)
Q Consensus 539 -------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--~~~~i~~ 602 (608)
.....+++|+|+|+|+ +|..+|.+.++++.+.... .++++ .++||..+.+.+ ..+.|.+
T Consensus 215 ~~~~~~~~~~~~~~~l~~i~~P~lvi~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (294)
T PLN02824 215 LDFISYSGGPLPEELLPAVKCPVLIAWGE---KDPWEPVELGRAYANFDAV--EDFIVLPGVGHCPQDEAPELVNPLIES 289 (294)
T ss_pred HHHhccccccchHHHHhhcCCCeEEEEec---CCCCCChHHHHHHHhcCCc--cceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 0123578999999999 8999999999998877654 34444 467999776533 5677777
Q ss_pred HHHH
Q 007311 603 FLQR 606 (608)
Q Consensus 603 Fl~~ 606 (608)
||.+
T Consensus 290 fl~~ 293 (294)
T PLN02824 290 FVAR 293 (294)
T ss_pred HHhc
Confidence 7764
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=132.61 Aligned_cols=169 Identities=13% Similarity=0.111 Sum_probs=116.7
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
.|||+||++.+...|. .+.+.| ..+++++.+|.| . +.+=+.+
T Consensus 5 ~vvllHG~~~~~~~w~----~~~~~L~~~~~~via~Dl~--------G---------------------~G~S~~~---- 47 (255)
T PLN02965 5 HFVFVHGASHGAWCWY----KLATLLDAAGFKSTCVDLT--------G---------------------AGISLTD---- 47 (255)
T ss_pred EEEEECCCCCCcCcHH----HHHHHHhhCCceEEEecCC--------c---------------------CCCCCCC----
Confidence 4999999999999999 444445 457999999988 1 1100000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ .....+++..+.|.++++..+ ....++||||||++|+.++... +..++++|+++
T Consensus 48 --------------~----~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~-----p~~v~~lvl~~ 104 (255)
T PLN02965 48 --------------S----NTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKF-----TDKISMAIYVA 104 (255)
T ss_pred --------------c----cccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhC-----chheeEEEEEc
Confidence 0 001235667777888888764 2558999999999999999854 45677777766
Q ss_pred CCCCC------------------------------c-------cc-----------------------c-----------
Q 007311 531 GFALH------------------------------S-------AE-----------------------F----------- 539 (608)
Q Consensus 531 G~~~~------------------------------~-------~~-----------------------~----------- 539 (608)
+..+. . .. .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (255)
T PLN02965 105 AAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDK 184 (255)
T ss_pred cccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhh
Confidence 53100 0 00 0
Q ss_pred ---ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 540 ---EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 540 ---~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
....+++|+++++|+ +|.++|++.++++++.+++. ..++..++||.+..+.+ +.+.|.+|++.
T Consensus 185 ~~~~~~~i~vP~lvi~g~---~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 185 LPPNPEAEKVPRVYIKTA---KDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred ccchhhcCCCCEEEEEcC---CCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 012589999999999 89999999999999999873 33344567999776543 56777777654
|
|
| >PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-13 Score=121.75 Aligned_cols=98 Identities=24% Similarity=0.413 Sum_probs=74.6
Q ss_pred CHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccccc-----CCCchHHHHhh-----hh
Q 007311 133 SAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ-----FSDLPTWIDNN-----AE 202 (608)
Q Consensus 133 sp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~-----~~~~~~~~~~~-----~~ 202 (608)
||+|+.++++. ++++|||||+..||+.|||+|+ ++.+... ...++..+... ..
T Consensus 1 s~~el~~~l~~-------------~~~~liD~R~~~~~~~~hI~ga----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (113)
T PF00581_consen 1 SPEELKEMLEN-------------ESVLLIDVRSPEEYERGHIPGA----VNIPFPSLDPDEPSLSEDKLDEFLKELGKK 63 (113)
T ss_dssp -HHHHHHHHTT-------------TTEEEEEESSHHHHHHSBETTE----EEEEGGGGSSSSSBCHHHHHHHHHHHHTHG
T ss_pred CHHHHHhhhhC-------------CCeEEEEeCCHHHHHcCCCCCC----cccccccccccccccccccccccccccccc
Confidence 68999999933 6899999999999999999994 4443311 11122222211 12
Q ss_pred hcCCCeEEEEcCCCccHHHHHHH-----HHhcCCCCCcEEEcCccHHHHHHh
Q 007311 203 QLQGKHVLMYCTGGIRCEMASAY-----VRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 203 ~~k~k~Iv~yCtgGiR~~~a~~~-----L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
..++++||+||.+|.|+..+++. |++. ||++|+.|+||+.+|.++
T Consensus 64 ~~~~~~iv~yc~~~~~~~~~~~~~~~~~l~~~--g~~~v~~l~GG~~~w~~~ 113 (113)
T PF00581_consen 64 IDKDKDIVFYCSSGWRSGSAAAARVAWILKKL--GFKNVYILDGGFEAWKAE 113 (113)
T ss_dssp STTTSEEEEEESSSCHHHHHHHHHHHHHHHHT--TTSSEEEETTHHHHHHHH
T ss_pred ccccccceeeeecccccchhHHHHHHHHHHHc--CCCCEEEecChHHHHhcC
Confidence 36888999999999999998887 8875 999999999999999874
|
; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A .... |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=128.66 Aligned_cols=163 Identities=18% Similarity=0.211 Sum_probs=110.2
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||+|++...|. .+...|.+.++++.+|.| ... . +. . .
T Consensus 5 ~~iv~~HG~~~~~~~~~----~~~~~l~~~~~vi~~d~~--------G~G------~-------s~--~--~-------- 47 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFR----CLDEELSAHFTLHLVDLP--------GHG------R-------SR--G--F-------- 47 (245)
T ss_pred ceEEEEcCCCCchhhHH----HHHHhhccCeEEEEecCC--------cCc------c-------CC--C--C--------
Confidence 57999999999999998 777777777999999987 100 0 00 0 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
...++++.++.+.+.+ .....++||||||.+|+.++.+. +..++++|++++.
T Consensus 48 --------------------~~~~~~~~~~~~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~il~~~~ 99 (245)
T TIGR01738 48 --------------------GPLSLADAAEAIAAQA---PDPAIWLGWSLGGLVALHIAATH-----PDRVRALVTVASS 99 (245)
T ss_pred --------------------CCcCHHHHHHHHHHhC---CCCeEEEEEcHHHHHHHHHHHHC-----HHhhheeeEecCC
Confidence 0112444444444443 23457999999999999999854 3457777777654
Q ss_pred CCCc-----c-------------------c--------------------------------------------------
Q 007311 533 ALHS-----A-------------------E-------------------------------------------------- 538 (608)
Q Consensus 533 ~~~~-----~-------------------~-------------------------------------------------- 538 (608)
+... . .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (245)
T TIGR01738 100 PCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVD 179 (245)
T ss_pred cccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhccc
Confidence 3110 0 0
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHh
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
....++++|+|+++|+ +|..+|.+..+.+++.+++ .+++.. ++||.+..+ ..+++.+-|.+|
T Consensus 180 ~~~~l~~i~~Pvlii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e--~p~~~~~~i~~f 244 (245)
T TIGR01738 180 LRQPLQNISVPFLRLYGY---LDGLVPAKVVPYLDKLAPH--SELYIFAKAAHAPFLS--HAEAFCALLVAF 244 (245)
T ss_pred HHHHHhcCCCCEEEEeec---CCcccCHHHHHHHHHhCCC--CeEEEeCCCCCCcccc--CHHHHHHHHHhh
Confidence 0124789999999999 8999999999999988876 555555 579998774 344444444444
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-12 Score=138.27 Aligned_cols=63 Identities=24% Similarity=0.278 Sum_probs=48.5
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh------hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP------YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~------~~~~i~~Fl~~~ 607 (608)
..+++|+|++||+ +|.++|.+.++++++.+.....+++.+ ++||.+..+.+ .++.|.+||.++
T Consensus 276 ~~i~~P~Lii~G~---~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 276 EEVSLPLLILHGE---ADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred ccCCCCEEEEEeC---CCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 4689999999999 899999999999998885433555555 46999865432 567788898765
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=132.31 Aligned_cols=163 Identities=17% Similarity=0.198 Sum_probs=110.0
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||+|++...|. .+.+.|.+.++++.+|-| +.. . +. .| +
T Consensus 14 ~~ivllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G------~-------S~----~~-~------ 57 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWR----CIDEELSSHFTLHLVDLP--------GFG------R-------SR----GF-G------ 57 (256)
T ss_pred CeEEEECCCCCChhHHH----HHHHHHhcCCEEEEecCC--------CCC------C-------CC----CC-C------
Confidence 46999999999999999 566666667999999988 110 0 00 00 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
...+++.++.+.+. ......++|||+||.+|+.+|.+. +..++++|++++.
T Consensus 58 ---------------------~~~~~~~~~~l~~~---~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lili~~~ 108 (256)
T PRK10349 58 ---------------------ALSLADMAEAVLQQ---APDKAIWLGWSLGGLVASQIALTH-----PERVQALVTVASS 108 (256)
T ss_pred ---------------------CCCHHHHHHHHHhc---CCCCeEEEEECHHHHHHHHHHHhC-----hHhhheEEEecCc
Confidence 01233334444332 223447999999999999998854 4567888887653
Q ss_pred CCCcc------------------------c--------------------------------------------------
Q 007311 533 ALHSA------------------------E-------------------------------------------------- 538 (608)
Q Consensus 533 ~~~~~------------------------~-------------------------------------------------- 538 (608)
+.... .
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (256)
T PRK10349 109 PCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDL 188 (256)
T ss_pred cceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCcc
Confidence 21100 0
Q ss_pred -cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh--hHHHHHHHHH
Q 007311 539 -FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 -~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+.++.+.+.+++ .++++ .++||.++.+.+ +.+.+.+|-+
T Consensus 189 ~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~i~~--~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 189 RQPLQNVSMPFLRLYGY---LDGLVPRKVVPMLDKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred HHHHhhcCCCeEEEecC---CCccCCHHHHHHHHHhCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 1134678999999999 8999999999999999886 44444 467999887643 4566666543
|
|
| >smart00450 RHOD Rhodanese Homology Domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-13 Score=118.69 Aligned_cols=88 Identities=27% Similarity=0.380 Sum_probs=68.1
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchH--------HHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHh
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPT--------WIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRS 228 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~--------~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~ 228 (608)
++++|||||+..||+.|||+|+ ++.+...+..... .........++++||+||.+|.|+..++.+|++
T Consensus 3 ~~~~ivDvR~~~e~~~~hi~ga----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~ 78 (100)
T smart00450 3 EKVVLLDVRSPEEYEGGHIPGA----VNIPLSELLDRRGELDILEFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRE 78 (100)
T ss_pred CCEEEEECCCHHHhccCCCCCc----eeCCHHHhccCCCCcCHHHHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHH
Confidence 5789999999999999999994 4443222221110 011123456889999999999999999999998
Q ss_pred cCCCCCcEEEcCccHHHHHHhC
Q 007311 229 KGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 229 ~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
. ||++||.|.||+.+|.++.
T Consensus 79 ~--G~~~v~~l~GG~~~w~~~~ 98 (100)
T smart00450 79 L--GFKNVYLLDGGYKEWSAAG 98 (100)
T ss_pred c--CCCceEEecCCHHHHHhcC
Confidence 7 9999999999999998764
|
An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=128.87 Aligned_cols=169 Identities=15% Similarity=0.141 Sum_probs=111.2
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.||++||+|.+...|. .+...|..+++++.+|.| ... . ..+ .
T Consensus 12 ~~~~li~~hg~~~~~~~~~----~~~~~l~~~~~v~~~d~~--------G~G------~------------s~~-~---- 56 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWD----PVLPALTPDFRVLRYDKR--------GHG------L------------SDA-P---- 56 (251)
T ss_pred CCCeEEEEcCcccchhhHH----HHHHHhhcccEEEEecCC--------CCC------C------------CCC-C----
Confidence 4578999999999999998 666777778999999988 100 0 000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
....++...++.+.+.++... ....|+|||+||++|+.+|.+.+ ..++++|++
T Consensus 57 ---------------------~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p-----~~v~~li~~ 110 (251)
T TIGR02427 57 ---------------------EGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRP-----DRVRALVLS 110 (251)
T ss_pred ---------------------CCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCH-----HHhHHHhhc
Confidence 001134455556666666543 34579999999999999998642 335555554
Q ss_pred cCCCCC-------------------------------------cc------------------------------ccccC
Q 007311 530 SGFALH-------------------------------------SA------------------------------EFEHR 542 (608)
Q Consensus 530 sG~~~~-------------------------------------~~------------------------------~~~~~ 542 (608)
++.... .. .....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (251)
T TIGR02427 111 NTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLG 190 (251)
T ss_pred cCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhh
Confidence 422110 00 01123
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
++++|+++++|+ +|..+|.+..+.+.+.+++ ..++.. ++||.+..+ ..+.+.+.+..|
T Consensus 191 ~~~~Pvlii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~--~p~~~~~~i~~f 249 (251)
T TIGR02427 191 AIAVPTLCIAGD---QDGSTPPELVREIADLVPG--ARFAEIRGAGHIPCVE--QPEAFNAALRDF 249 (251)
T ss_pred hcCCCeEEEEec---cCCcCChHHHHHHHHhCCC--ceEEEECCCCCccccc--ChHHHHHHHHHH
Confidence 578999999999 8999999999999888876 455555 579987663 334555554444
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-13 Score=120.63 Aligned_cols=98 Identities=18% Similarity=0.273 Sum_probs=77.0
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++|+.++++.. .++++|||||+..||..|||+| +++.+... +..+ .....+++++
T Consensus 7 ~~~~s~~el~~~l~~~-----------~~~~~iiDvR~~~e~~~ghIpg----A~~ip~~~---l~~~--~~~~i~~~~~ 66 (110)
T cd01521 7 AFETDCWDVAIALKNG-----------KPDFVLVDVRSAEAYARGHVPG----AINLPHRE---ICEN--ATAKLDKEKL 66 (110)
T ss_pred eeecCHHHHHHHHHcC-----------CCCEEEEECCCHHHHhcCCCCC----CEeCCHHH---hhhH--hhhcCCCCCe
Confidence 5678999999999752 1358999999999999999999 55544222 2211 1123468899
Q ss_pred EEEEcCCC--ccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGG--IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgG--iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+| .|+..++..|++. || +|+.|.||+.+|.+.
T Consensus 67 vvvyc~~g~~~~s~~~a~~l~~~--G~-~v~~l~GG~~~W~~~ 106 (110)
T cd01521 67 FVVYCDGPGCNGATKAALKLAEL--GF-PVKEMIGGLDWWKRE 106 (110)
T ss_pred EEEEECCCCCchHHHHHHHHHHc--CC-eEEEecCCHHHHHHC
Confidence 99999988 4899999999987 99 599999999999875
|
This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins. |
| >COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-13 Score=120.46 Aligned_cols=85 Identities=27% Similarity=0.438 Sum_probs=67.7
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++.+|||||++.||+.+|++++ +++.+. ++++....... .+++++|++||.+|.||..|+.+|+++ ||++|
T Consensus 19 ~~~~liDvR~~~e~~~~~i~~~---~~~ip~---~~~~~~~~~~~-~~~~~~ivv~C~~G~rS~~aa~~L~~~--G~~~~ 89 (110)
T COG0607 19 EDAVLLDVREPEEYERGHIPGA---AINIPL---SELKAAENLLE-LPDDDPIVVYCASGVRSAAAAAALKLA--GFTNV 89 (110)
T ss_pred CCCEEEeccChhHhhhcCCCcc---eeeeec---ccchhhhcccc-cCCCCeEEEEeCCCCChHHHHHHHHHc--CCccc
Confidence 6799999999999999999982 223332 23333222111 458999999999999999999999998 99999
Q ss_pred EEcCccHHHHHHhC
Q 007311 237 FQLYGGIQRYLEQF 250 (608)
Q Consensus 237 ~~L~GGi~~w~~~~ 250 (608)
++|.|||.+|....
T Consensus 90 ~~l~gG~~~w~~~~ 103 (110)
T COG0607 90 YNLDGGIDAWKGAG 103 (110)
T ss_pred cccCCcHHHHHhcC
Confidence 99999999998864
|
|
| >cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-13 Score=122.47 Aligned_cols=103 Identities=25% Similarity=0.238 Sum_probs=75.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh-------hhhhccccCCCCccccCcccccC----CCc--hHHHH
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL-------YETRIGKFRTPSVETLDPEIRQF----SDL--PTWID 198 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~-------~E~~~Gh~~g~~~~~l~~~~~~~----~~~--~~~~~ 198 (608)
++++++.+++++ ++++|||||+. .||+.|||+|+...++....... ..+ ++.+.
T Consensus 2 i~~~~l~~~l~~-------------~~~~ivDvR~~~~~~~~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~ 68 (122)
T cd01448 2 VSPDWLAEHLDD-------------PDVRILDARWYLPDRDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFA 68 (122)
T ss_pred cCHHHHHHHhCC-------------CCeEEEEeecCCCCCchhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHH
Confidence 689999999865 46899999999 99999999995432221111000 001 11222
Q ss_pred hh---hhhcCCCeEEEEcCC-CccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 199 NN---AEQLQGKHVLMYCTG-GIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 199 ~~---~~~~k~k~Iv~yCtg-GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+. ...+++++||+||.+ |.|+..++..|+.. ||+||+.|.||+.+|...
T Consensus 69 ~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~--G~~~v~~l~GG~~~W~~~ 121 (122)
T cd01448 69 ELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYF--GHENVRVLDGGLQAWKAE 121 (122)
T ss_pred HHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHc--CCCCEEEecCCHHHHHhC
Confidence 22 234689999999988 59999999999987 999999999999999763
|
TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.5e-12 Score=128.16 Aligned_cols=168 Identities=21% Similarity=0.217 Sum_probs=112.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.|||+||++.+...|. .+.+.|...++++.+|.| ... . + ..+.
T Consensus 28 ~~~vv~~hG~~~~~~~~~----~~~~~l~~~~~vi~~D~~--------G~G------~-----S--~~~~---------- 72 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSWR----DLMPPLARSFRVVAPDLP--------GHG------F-----T--RAPF---------- 72 (278)
T ss_pred CCeEEEEcCCCCCHHHHH----HHHHHHhhCcEEEeecCC--------CCC------C-----C--CCcc----------
Confidence 467999999999999999 566666667999999987 100 0 0 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++...+.+.++++..+ ....|+||||||++|+.++.+. +..++++|+++
T Consensus 73 --------------------~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~v~~~ 127 (278)
T TIGR03056 73 --------------------RFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDG-----PVTPRMVVGIN 127 (278)
T ss_pred --------------------ccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhC-----CcccceEEEEc
Confidence 001235556666777776544 3348999999999999999854 44567777765
Q ss_pred CCCCCc-------------------------------cc-----------------------------------------
Q 007311 531 GFALHS-------------------------------AE----------------------------------------- 538 (608)
Q Consensus 531 G~~~~~-------------------------------~~----------------------------------------- 538 (608)
+..... ..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (278)
T TIGR03056 128 AALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQW 207 (278)
T ss_pred CcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcc
Confidence 432100 00
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl 604 (608)
.....+++|+|+++|+ +|..+|.+.++++.+.+++ ..++..+ +||.++.+.+ .++.|.+||
T Consensus 208 ~~~~~~~~~~~i~~P~lii~g~---~D~~vp~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 208 DLAPLNRDLPRITIPLHLIAGE---EDKAVPPDESKRAATRVPT--ATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred cccchhhhcccCCCCEEEEEeC---CCcccCHHHHHHHHHhccC--CeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 0123478999999999 8999999999999988876 4555554 5999876432 556666665
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.9e-12 Score=135.94 Aligned_cols=59 Identities=17% Similarity=0.423 Sum_probs=47.9
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
..+++|+++|+|+ +|.++|.+.++++++.+++ ..++..++||.++.+.+ ..+.|.+||.
T Consensus 293 ~~i~~PvLiI~G~---~D~~v~~~~~~~l~~~~p~--a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 293 SKLSCPLLLLWGD---LDPWVGPAKAEKIKAFYPD--TTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred hcCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 4578999999999 8999999999999999876 45555589999877543 6677888875
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.6e-12 Score=129.79 Aligned_cols=173 Identities=19% Similarity=0.217 Sum_probs=110.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||+|++...|......+...+..+++++.+|.| + +.+-+.+
T Consensus 31 ~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~--------G---------------------~G~S~~~---- 77 (282)
T TIGR03343 31 EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSP--------G---------------------FNKSDAV---- 77 (282)
T ss_pred CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCC--------C---------------------CCCCCCC----
Confidence 569999999999988864333343334457999999988 1 1100000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
. .++ ...+ ...+.+.++++..+ ....++||||||++|+.++.++ +..++++|++++
T Consensus 78 ------------~--~~~---~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~ 134 (282)
T TIGR03343 78 ------------V--MDE---QRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEY-----PDRIGKLILMGP 134 (282)
T ss_pred ------------c--Ccc---cccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhC-----hHhhceEEEECC
Confidence 0 000 0001 11334555555544 3458999999999999999854 345777777664
Q ss_pred CCC-------Cc-----------------------------c-------------------c------------------
Q 007311 532 FAL-------HS-----------------------------A-------------------E------------------ 538 (608)
Q Consensus 532 ~~~-------~~-----------------------------~-------------------~------------------ 538 (608)
... .. . .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (282)
T TIGR03343 135 GGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWD 214 (282)
T ss_pred CCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccch
Confidence 210 00 0 0
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|+.++.+.++++++.+++. ..++..++||.++.+.+ ..+.|.+||.
T Consensus 215 ~~~~l~~i~~Pvlli~G~---~D~~v~~~~~~~~~~~~~~~-~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 215 VTARLGEIKAKTLVTWGR---DDRFVPLDHGLKLLWNMPDA-QLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhhCCCCEEEEEcc---CCCcCCchhHHHHHHhCCCC-EEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 0123678999999999 89999999999999998863 33344467999877643 5577777775
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.9e-12 Score=129.33 Aligned_cols=185 Identities=17% Similarity=0.156 Sum_probs=110.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCc-cCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPH-ELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
...|.||++||++++...|. .+++.|. .++.++.+|.|. ..+ .. .........|+.
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~G~~-----------~~------~~~~~~~~~~~~- 82 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYS----YFAVALAQAGFRVIMPDAPMHGAR-----------FS------GDEARRLNHFWQ- 82 (249)
T ss_pred CCCCEEEEeCCCCcccchHH----HHHHHHHhCCCEEEEecCCccccc-----------CC------CccccchhhHHH-
Confidence 34579999999999998888 5555554 479999999882 100 00 000000111111
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. .....+++.+.++++.+.-.......+|+||||||.+|+.++.+. ..++..+
T Consensus 83 ------------~---------~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~------~~~~~~~ 135 (249)
T PRK10566 83 ------------I---------LLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARH------PWVKCVA 135 (249)
T ss_pred ------------H---------HHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhC------CCeeEEE
Confidence 0 000012222333333221001124568999999999999988743 2344443
Q ss_pred Ee--cCCC--------CC-cc----------------c-----cccCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHh
Q 007311 528 LC--SGFA--------LH-SA----------------E-----FEHRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAF 574 (608)
Q Consensus 528 li--sG~~--------~~-~~----------------~-----~~~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~ 574 (608)
.+ +++. +. .. . ....++ ++|+|++||+ +|.+||.+.++++.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~---~D~~v~~~~~~~l~~~l 212 (249)
T PRK10566 136 SLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGL---ADDVVPAAESLRLQQAL 212 (249)
T ss_pred EeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcC---CCCcCCHHHHHHHHHHH
Confidence 32 2221 11 00 0 012344 6999999999 89999999999999988
Q ss_pred ccCC----cEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 575 EEGC----SVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 575 ~~~~----~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
.... ...+.+ +.||.+. +..++++.+||++.|
T Consensus 213 ~~~g~~~~~~~~~~~~~~H~~~--~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 213 RERGLDKNLTCLWEPGVRHRIT--PEALDAGVAFFRQHL 249 (249)
T ss_pred HhcCCCcceEEEecCCCCCccC--HHHHHHHHHHHHhhC
Confidence 7532 344444 4599874 578999999999865
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-12 Score=116.81 Aligned_cols=143 Identities=23% Similarity=0.298 Sum_probs=100.7
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
.||++||++.+...|. .+.+.|. .++.++.+|.|..-. ..
T Consensus 1 ~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~~~~~~~~-----------------------------~~------ 41 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ----PLAEALAEQGYAVVAFDYPGHGD-----------------------------SD------ 41 (145)
T ss_dssp EEEEECTTTTTTHHHH----HHHHHHHHTTEEEEEESCTTSTT-----------------------------SH------
T ss_pred CEEEECCCCCCHHHHH----HHHHHHHHCCCEEEEEecCCCCc-----------------------------cc------
Confidence 4899999999999998 5555554 479999998772211 00
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
....+.+.++.+.+... .....+++|||+||.+++.++.+ . .+++++|+++++
T Consensus 42 --------------------~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~-----~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 42 --------------------GADAVERVLADIRAGYP-DPDRIILIGHSMGGAIAANLAAR-----N-PRVKAVVLLSPY 94 (145)
T ss_dssp --------------------HSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHHHHHHHH-----S-TTESEEEEESES
T ss_pred --------------------hhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHHHHHhhh-----c-cceeEEEEecCc
Confidence 01123333443331111 33556899999999999999983 2 689999999995
Q ss_pred CCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCc
Q 007311 533 ALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHI 589 (608)
Q Consensus 533 ~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ 589 (608)
+. .......++|+++++|+ +|+.++.+..+++++.+... .++++.+ ++|.
T Consensus 95 ~~---~~~~~~~~~pv~~i~g~---~D~~~~~~~~~~~~~~~~~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 95 PD---SEDLAKIRIPVLFIHGE---NDPLVPPEQVRRLYEALPGP-KELYIIPGAGHF 145 (145)
T ss_dssp SG---CHHHTTTTSEEEEEEET---T-SSSHHHHHHHHHHHHCSS-EEEEEETTS-TT
T ss_pred cc---hhhhhccCCcEEEEEEC---CCCcCCHHHHHHHHHHcCCC-cEEEEeCCCcCc
Confidence 32 23456888999999999 89999999999999999844 5655555 4774
|
... |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-12 Score=133.67 Aligned_cols=106 Identities=20% Similarity=0.171 Sum_probs=75.7
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc-------c------------------------c----
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS-------A------------------------E---- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~-------~------------------------~---- 538 (608)
...|+|+||||++|+.++.. .+..++++|+++++.... . .
T Consensus 135 ~i~l~GhSmGG~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (330)
T PLN02298 135 PRFLYGESMGGAICLLIHLA-----NPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVK 209 (330)
T ss_pred CEEEEEecchhHHHHHHHhc-----CcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCccccccc
Confidence 35899999999999998874 345688999887642100 0 0
Q ss_pred -----------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE
Q 007311 539 -----------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE 583 (608)
Q Consensus 539 -----------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~ 583 (608)
.....+++|+|++||+ +|.++|.+.++++++.+.....+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~---~D~ivp~~~~~~l~~~i~~~~~~l~~ 286 (330)
T PLN02298 210 VPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGS---ADVVTDPDVSRALYEEAKSEDKTIKI 286 (330)
T ss_pred CHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecC---CCCCCCHHHHHHHHHHhccCCceEEE
Confidence 0123578999999999 89999999999999887643366666
Q ss_pred eCC-CCcCCCChh------hHHHHHHHHHHh
Q 007311 584 HDC-GHIIPTRSP------YIDEIKSFLQRF 607 (608)
Q Consensus 584 ~~g-GH~ip~~~~------~~~~i~~Fl~~~ 607 (608)
+++ ||.+....+ ..+.+.+||.+.
T Consensus 287 ~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 287 YDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred cCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 664 899754322 356677787664
|
|
| >cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1 | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.4e-13 Score=115.08 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=62.3
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCcc--HHHHHHHHHhcCCCCC
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIR--CEMASAYVRSKGAGFE 234 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR--~~~a~~~L~~~~~Gf~ 234 (608)
++++|||||++.||..|||+| +++.+...+.. ..... ...++++||+||.+|.| +..|+..|++. ||+
T Consensus 9 ~~~~liDvR~~~e~~~~hi~g----a~~ip~~~~~~--~~~~~--~~~~~~~ivl~c~~G~~~~s~~aa~~L~~~--G~~ 78 (92)
T cd01532 9 EEIALIDVREEDPFAQSHPLW----AANLPLSRLEL--DAWVR--IPRRDTPIVVYGEGGGEDLAPRAARRLSEL--GYT 78 (92)
T ss_pred CCeEEEECCCHHHHhhCCccc----CeeCCHHHHHh--hhHhh--CCCCCCeEEEEeCCCCchHHHHHHHHHHHc--Ccc
Confidence 568999999999999999998 55544221110 01111 11358899999999998 58899999987 999
Q ss_pred cEEEcCccHHHHH
Q 007311 235 NVFQLYGGIQRYL 247 (608)
Q Consensus 235 nV~~L~GGi~~w~ 247 (608)
+|+.|+||+.+|.
T Consensus 79 ~v~~l~GG~~~W~ 91 (92)
T cd01532 79 DVALLEGGLQGWR 91 (92)
T ss_pred CEEEccCCHHHHc
Confidence 9999999999996
|
This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-11 Score=128.59 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=112.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.|||+||++++...|. .+.+.|...++++.+|.| ... . +..+.
T Consensus 27 g~~vvllHG~~~~~~~w~----~~~~~L~~~~~via~D~~--------G~G------~-------S~~~~---------- 71 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWR----NIIPHLAGLGRCLAPDLI--------GMG------A-------SDKPD---------- 71 (295)
T ss_pred CCEEEEECCCCCCHHHHH----HHHHHHhhCCEEEEEcCC--------CCC------C-------CCCCC----------
Confidence 357999999999999999 666666656799999988 100 0 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++...+.+..+++..+ ....|+|||+||.+|+.++.++ +..++++|+++
T Consensus 72 ---------------------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~ 125 (295)
T PRK03592 72 ---------------------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARH-----PDRVRGIAFME 125 (295)
T ss_pred ---------------------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhC-----hhheeEEEEEC
Confidence 00134455566666666654 4558999999999999999954 45688888877
Q ss_pred CCCCC------cc---------------c---------------------------------------------------
Q 007311 531 GFALH------SA---------------E--------------------------------------------------- 538 (608)
Q Consensus 531 G~~~~------~~---------------~--------------------------------------------------- 538 (608)
+...+ .. .
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (295)
T PRK03592 126 AIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELP 205 (295)
T ss_pred CCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcC
Confidence 52110 00 0
Q ss_pred ----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHH-HHhccCCcEEEEeCCCCcCCCChh--hHHH
Q 007311 539 ----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELA-KAFEEGCSVIIEHDCGHIIPTRSP--YIDE 599 (608)
Q Consensus 539 ----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~-~~~~~~~~~vv~~~gGH~ip~~~~--~~~~ 599 (608)
.....+++|+|+|+|+ +|.+++.....++. +..++. ...+..++||.+..+.+ ..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~v~~~ 281 (295)
T PRK03592 206 IDGEPADVVALVEEYAQWLATSDVPKLLINAE---PGAILTTGAIRDWCRSWPNQL-EITVFGAGLHFAQEDSPEEIGAA 281 (295)
T ss_pred CCCcchhhHhhhhHhHHHhccCCCCeEEEecc---CCcccCcHHHHHHHHHhhhhc-ceeeccCcchhhhhcCHHHHHHH
Confidence 0012368999999999 89999555554544 455542 33333478999876533 5688
Q ss_pred HHHHHHHh
Q 007311 600 IKSFLQRF 607 (608)
Q Consensus 600 i~~Fl~~~ 607 (608)
|.+||++.
T Consensus 282 i~~fl~~~ 289 (295)
T PRK03592 282 IAAWLRRL 289 (295)
T ss_pred HHHHHHHh
Confidence 88898763
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.3e-12 Score=133.79 Aligned_cols=171 Identities=13% Similarity=0.104 Sum_probs=110.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++++...|. .+...|.+.++++.+|.| +. ..-+.+.
T Consensus 88 gp~lvllHG~~~~~~~w~----~~~~~L~~~~~via~Dl~--------G~---------------------G~S~~~~-- 132 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWR----RNIGVLAKNYTVYAIDLL--------GF---------------------GASDKPP-- 132 (360)
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhcCCEEEEECCC--------CC---------------------CCCCCCC--
Confidence 467999999999999999 555566667999999988 11 0000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ ....++...+.+.++++..+ ....|+|||+||.+|+.++... .+..++++|+++
T Consensus 133 ----------~----------~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~P~rV~~LVLi~ 188 (360)
T PLN02679 133 ----------G----------FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASES----TRDLVRGLVLLN 188 (360)
T ss_pred ----------C----------ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhc----ChhhcCEEEEEC
Confidence 0 01134455556666666543 3457999999999999888632 134577777766
Q ss_pred CCCCC-----------------------------------c-----------------c----c----------------
Q 007311 531 GFALH-----------------------------------S-----------------A----E---------------- 538 (608)
Q Consensus 531 G~~~~-----------------------------------~-----------------~----~---------------- 538 (608)
+.... . . .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T PLN02679 189 CAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGA 268 (360)
T ss_pred CccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCCh
Confidence 32100 0 0 0
Q ss_pred -----------------cccCCCCCCEEEEEcCCCCCCcccchHH-----HHHHHHHhccCCcEEEEe-CCCCcCCCChh
Q 007311 539 -----------------FEHRSINCPSLHIFGGDLGNDRQVANQA-----SKELAKAFEEGCSVIIEH-DCGHIIPTRSP 595 (608)
Q Consensus 539 -----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-----~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~ 595 (608)
.....+++|+|+|+|+ +|+.+|.+. .+++.+.+++ .++++. ++||.++.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~---~D~~~p~~~~~~~~~~~l~~~ip~--~~l~~i~~aGH~~~~E~P 343 (360)
T PLN02679 269 LDAFVSIVTGPPGPNPIKLIPRISLPILVLWGD---QDPFTPLDGPVGKYFSSLPSQLPN--VTLYVLEGVGHCPHDDRP 343 (360)
T ss_pred HHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeC---CCCCcCchhhHHHHHHhhhccCCc--eEEEEcCCCCCCccccCH
Confidence 0123578999999999 899998763 2345555555 455444 56999877544
Q ss_pred --hHHHHHHHHHH
Q 007311 596 --YIDEIKSFLQR 606 (608)
Q Consensus 596 --~~~~i~~Fl~~ 606 (608)
+.+.|.+||.+
T Consensus 344 e~~~~~I~~FL~~ 356 (360)
T PLN02679 344 DLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHHHHHHHh
Confidence 66888888875
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=128.89 Aligned_cols=172 Identities=13% Similarity=0.101 Sum_probs=115.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++|||+||++++...|. .+.+.|. .+++++.+|.| ... ...+.+
T Consensus 46 ~~~lvliHG~~~~~~~w~----~~~~~L~~~gy~vi~~Dl~--------G~G------------------~S~~~~---- 91 (302)
T PRK00870 46 GPPVLLLHGEPSWSYLYR----KMIPILAAAGHRVIAPDLI--------GFG------------------RSDKPT---- 91 (302)
T ss_pred CCEEEEECCCCCchhhHH----HHHHHHHhCCCEEEEECCC--------CCC------------------CCCCCC----
Confidence 468999999999999999 5556664 46999999988 110 000000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. ....++++..+.+.++++..+ ....|+|||+||.+|+.+|... +..++++|++
T Consensus 92 ----------------~----~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~ 146 (302)
T PRK00870 92 ----------------R----REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEH-----PDRFARLVVA 146 (302)
T ss_pred ----------------C----cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhC-----hhheeEEEEe
Confidence 0 001235666677777777654 4457999999999999999854 4457777777
Q ss_pred cCCCCCc-----------------------------------c-c-----------------------------------
Q 007311 530 SGFALHS-----------------------------------A-E----------------------------------- 538 (608)
Q Consensus 530 sG~~~~~-----------------------------------~-~----------------------------------- 538 (608)
++..+.. . +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T PRK00870 147 NTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVA 226 (302)
T ss_pred CCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchH
Confidence 6432100 0 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC-c-EEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC-S-VIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~-~-~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.....+++|+++|||+ +|+++|... +++.+.+++.. . .++..++||.++.+.+ ..+.|.+||.+
T Consensus 227 ~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 227 ANRAAWAVLERWDKPFLTAFSD---SDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred HHHHHHHhhhcCCCceEEEecC---CCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 0013578999999999 899999766 88888887632 2 2344467999776533 56777888764
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=122.32 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=70.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++|||+||++++...|. .+.+.|. .++++.+|.| +..+ .. +
T Consensus 2 ~p~vvllHG~~~~~~~w~----~~~~~l~-~~~vi~~D~~G~G~S---------------------------~~---~-- 44 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQ----PVGEALP-DYPRLYIDLPGHGGS---------------------------AA---I-- 44 (242)
T ss_pred CCEEEEECCCCCChHHHH----HHHHHcC-CCCEEEecCCCCCCC---------------------------CC---c--
Confidence 357999999999999999 6666675 5999999988 1000 00 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
....+++..+.+.++++..+ ....++||||||.+|+.++.+.+ +..++++|++
T Consensus 45 ----------------------~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~----~~~v~~lvl~ 98 (242)
T PRK11126 45 ----------------------SVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGL----AGGLCGLIVE 98 (242)
T ss_pred ----------------------cccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCC----cccccEEEEe
Confidence 01146667777888887755 34579999999999999999542 2238888887
Q ss_pred cCC
Q 007311 530 SGF 532 (608)
Q Consensus 530 sG~ 532 (608)
++.
T Consensus 99 ~~~ 101 (242)
T PRK11126 99 GGN 101 (242)
T ss_pred CCC
Confidence 654
|
|
| >TIGR02981 phageshock_pspE phage shock operon rhodanese PspE | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.6e-13 Score=115.62 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=64.6
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
.+..+||||++.||..|||+| +++.+. .++.+++.. ...+++++|++||.+|.||..++..|++. ||++|
T Consensus 17 ~~~~lIDvR~~~ef~~ghIpg----Ainip~---~~l~~~l~~-~~~~~~~~vvlyC~~G~rS~~aa~~L~~~--G~~~v 86 (101)
T TIGR02981 17 AAEHWIDVRIPEQYQQEHIQG----AINIPL---KEIKEHIAT-AVPDKNDTVKLYCNAGRQSGMAKDILLDM--GYTHA 86 (101)
T ss_pred cCCEEEECCCHHHHhcCCCCC----CEECCH---HHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHc--CCCeE
Confidence 467899999999999999999 555542 234444433 22357889999999999999999999997 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
+.+ ||+.+|.
T Consensus 87 ~~~-GG~~~~~ 96 (101)
T TIGR02981 87 ENA-GGIKDIA 96 (101)
T ss_pred Eec-CCHHHhh
Confidence 986 9999996
|
Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-12 Score=141.12 Aligned_cols=102 Identities=25% Similarity=0.398 Sum_probs=82.6
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGK 207 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k 207 (608)
....++++|+.++++++ .+++|||||++.||+.|||+| +++.+...+.. ...+ .+.++++
T Consensus 285 ~~~~Is~~el~~~l~~~------------~~~~lIDvR~~~ef~~ghIpG----Ainip~~~l~~-~~~~---~~l~~d~ 344 (392)
T PRK07878 285 AGSTITPRELKEWLDSG------------KKIALIDVREPVEWDIVHIPG----AQLIPKSEILS-GEAL---AKLPQDR 344 (392)
T ss_pred CCCccCHHHHHHHHhCC------------CCeEEEECCCHHHHhcCCCCC----CEEcChHHhcc-hhHH---hhCCCCC
Confidence 35789999999999763 468999999999999999999 55544322221 1112 2346889
Q ss_pred eEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCC
Q 007311 208 HVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 208 ~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
+||+||.+|.|+..|+.+|++. ||+||+.|+||+.+|..++.
T Consensus 345 ~iVvyC~~G~rS~~aa~~L~~~--G~~~V~~L~GG~~~W~~~~~ 386 (392)
T PRK07878 345 TIVLYCKTGVRSAEALAALKKA--GFSDAVHLQGGVVAWAKQVD 386 (392)
T ss_pred cEEEEcCCChHHHHHHHHHHHc--CCCcEEEecCcHHHHHHhcC
Confidence 9999999999999999999997 99999999999999998764
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-11 Score=120.16 Aligned_cols=155 Identities=16% Similarity=0.180 Sum_probs=105.4
Q ss_pred cEEEEecCCCCChHHHHHH-HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGR-TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~-~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++||+||||+++...|..+ +..+.......++++.+|.| .|.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~-------------------------------g~~------ 44 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP-------------------------------PYP------ 44 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC-------------------------------CCH------
Confidence 4699999999999999853 33333333346888888876 110
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
++..+.+.++++..+ ....|+|+||||.+|+.+|.+.+ .+ +|+++
T Consensus 45 --------------------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~-------~~-~vl~~ 90 (190)
T PRK11071 45 --------------------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFM-------LP-AVVVN 90 (190)
T ss_pred --------------------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcC-------CC-EEEEC
Confidence 123445556665543 34589999999999999998542 23 46666
Q ss_pred CCCCCcc---------------c--------------c--ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc
Q 007311 531 GFALHSA---------------E--------------F--EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS 579 (608)
Q Consensus 531 G~~~~~~---------------~--------------~--~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~ 579 (608)
+...+.. + . .....+.|++++||+ +|.+||.+.+.++++.+ .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~iihg~---~De~V~~~~a~~~~~~~----~ 163 (190)
T PRK11071 91 PAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIWLLQQT---GDEVLDYRQAVAYYAAC----R 163 (190)
T ss_pred CCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEEEEEeC---CCCcCCHHHHHHHHHhc----c
Confidence 5443200 0 0 112366788999999 89999999999998843 3
Q ss_pred EEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 580 VIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 580 ~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.++..+++|.+...+...+.+.+|+.
T Consensus 164 ~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 164 QTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred eEEECCCCcchhhHHHhHHHHHHHhc
Confidence 33445679999665668888998875
|
|
| >cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-12 Score=109.56 Aligned_cols=81 Identities=27% Similarity=0.425 Sum_probs=64.9
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||+|+..||+.|||++ +++.+.. ++.... ......++++||+||..|.|+..++..|++. ||.+|
T Consensus 9 ~~~~iiD~R~~~~~~~~~i~g----a~~~~~~---~~~~~~-~~~~~~~~~~vv~~c~~~~~a~~~~~~l~~~--G~~~v 78 (89)
T cd00158 9 EDAVLLDVREPEEYAAGHIPG----AINIPLS---ELEERA-ALLELDKDKPIVVYCRSGNRSARAAKLLRKA--GGTNV 78 (89)
T ss_pred CCeEEEECCCHHHHhccccCC----CEecchH---HHhhHH-HhhccCCCCeEEEEeCCCchHHHHHHHHHHh--CcccE
Confidence 578999999999999999999 4444321 111110 1234568999999999999999999999997 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
+.|.||+.+|.
T Consensus 79 ~~l~gG~~~w~ 89 (89)
T cd00158 79 YNLEGGMLAWK 89 (89)
T ss_pred EEecCChhhcC
Confidence 99999999994
|
The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-12 Score=139.94 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=80.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...|+++|+.++++++ .++++|||||++.||+.|||+| +++.+...+.+-. .+++..+.+++++
T Consensus 281 ~~~Is~~el~~~l~~~-----------~~~~vlIDVR~~~E~~~ghIpG----AiniP~~~l~~~~-~~~~l~~l~~d~~ 344 (390)
T PRK07411 281 IPEMTVTELKALLDSG-----------ADDFVLIDVRNPNEYEIARIPG----SVLVPLPDIENGP-GVEKVKELLNGHR 344 (390)
T ss_pred cCccCHHHHHHHHhCC-----------CCCeEEEECCCHHHhccCcCCC----CEEccHHHhhccc-chHHHhhcCCCCe
Confidence 4679999999999752 1368999999999999999999 5554433222110 0112233468999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
||+||.+|.||..|+.+|++. ||++ ++|.||+.+|.+++..
T Consensus 345 IVvyC~~G~RS~~aa~~L~~~--G~~~-~~l~GG~~~W~~~~~p 385 (390)
T PRK07411 345 LIAHCKMGGRSAKALGILKEA--GIEG-TNVKGGITAWSREVDP 385 (390)
T ss_pred EEEECCCCHHHHHHHHHHHHc--CCCe-EEecchHHHHHHhcCC
Confidence 999999999999999999987 9974 6899999999987643
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-11 Score=120.12 Aligned_cols=162 Identities=20% Similarity=0.247 Sum_probs=115.3
Q ss_pred EEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCCcc
Q 007311 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGKR 454 (608)
Q Consensus 375 iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 454 (608)
|||+||++.+...|. .+.+.|.++++++.+|.|- .. . ..+ .
T Consensus 1 vv~~hG~~~~~~~~~----~~~~~l~~~~~v~~~d~~G--------~G------~------------s~~-~-------- 41 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD----PLAEALARGYRVIAFDLPG--------HG------R------------SDP-P-------- 41 (228)
T ss_dssp EEEE-STTTTGGGGH----HHHHHHHTTSEEEEEECTT--------ST------T------------SSS-H--------
T ss_pred eEEECCCCCCHHHHH----HHHHHHhCCCEEEEEecCC--------cc------c------------ccc-c--------
Confidence 799999999999999 5666666789999999881 00 0 000 0
Q ss_pred ccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 455 ETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 455 ~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+ .....+++.++.+.++++..+ ....|+|||+||.+++.++.+. +..++++|++++..
T Consensus 42 -------------~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 42 -------------PD--YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARY-----PDRVKGLVLLSPPP 101 (228)
T ss_dssp -------------SS--GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESS
T ss_pred -------------cc--cCCcchhhhhhhhhhccccccccccccccccccccccccccccc-----ccccccceeecccc
Confidence 00 012345666777777777765 4558999999999999999854 44799999999887
Q ss_pred CCc-----c---c-------------------------------------------------------cccCCCCCCEEE
Q 007311 534 LHS-----A---E-------------------------------------------------------FEHRSINCPSLH 550 (608)
Q Consensus 534 ~~~-----~---~-------------------------------------------------------~~~~~i~~PvL~ 550 (608)
... . . .....+++|+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~ 181 (228)
T PF12697_consen 102 PLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLV 181 (228)
T ss_dssp SHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEE
T ss_pred cccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCeEE
Confidence 421 0 0 012467999999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHHH
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~~ 602 (608)
++|+ +|.+++.+..+++.+.+++ ..++..+ +||.+.. +..+++.+
T Consensus 182 i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~--~~p~~~~~ 227 (228)
T PF12697_consen 182 IHGE---DDPIVPPESAEELADKLPN--AELVVIPGAGHFLFL--EQPDEVAE 227 (228)
T ss_dssp EEET---TSSSSHHHHHHHHHHHSTT--EEEEEETTSSSTHHH--HSHHHHHH
T ss_pred eecC---CCCCCCHHHHHHHHHHCCC--CEEEEECCCCCccHH--HCHHHHhc
Confidence 9999 8999999999999988876 6666665 6999755 34444443
|
... |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.7e-11 Score=122.94 Aligned_cols=173 Identities=18% Similarity=0.198 Sum_probs=114.5
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..+.++||+.||++.+...|. .+++.|. .++.++.+|.. .+. +. +. + .+.+
T Consensus 34 ~~~~~~vIi~HGf~~~~~~~~----~~A~~La~~G~~vLrfD~r--------g~~-----Ge-------S~-G--~~~~- 85 (307)
T PRK13604 34 PKKNNTILIASGFARRMDHFA----GLAEYLSSNGFHVIRYDSL--------HHV-----GL-------SS-G--TIDE- 85 (307)
T ss_pred CCCCCEEEEeCCCCCChHHHH----HHHHHHHHCCCEEEEecCC--------CCC-----CC-------CC-C--cccc-
Confidence 345578999999999987677 7777775 58999988854 100 00 00 0 0100
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. .++ ....++..+++|+++. .....+|+||||||++|+.+|. ..+++++|
T Consensus 86 -------------~--t~s-----~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~-------~~~v~~lI 135 (307)
T PRK13604 86 -------------F--TMS-----IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN-------EIDLSFLI 135 (307)
T ss_pred -------------C--ccc-----ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc-------CCCCCEEE
Confidence 0 000 0135677778888663 3345689999999999876665 33588999
Q ss_pred EecCCCCCc--------------------------------c-----------c------cccCCCCCCEEEEEcCCCCC
Q 007311 528 LCSGFALHS--------------------------------A-----------E------FEHRSINCPSLHIFGGDLGN 558 (608)
Q Consensus 528 lisG~~~~~--------------------------------~-----------~------~~~~~i~~PvL~i~G~~~~~ 558 (608)
+.+|+.... . . .....++.|+|+|||+ +
T Consensus 136 ~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~---~ 212 (307)
T PRK13604 136 TAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTAN---N 212 (307)
T ss_pred EcCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcC---C
Confidence 999886610 0 0 1123578999999999 8
Q ss_pred CcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHH
Q 007311 559 DRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 559 D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
|.+||.+.++++++.+......++.+ +++|.+... .--+.+|.+
T Consensus 213 D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~---~~~~~~~~~ 257 (307)
T PRK13604 213 DSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN---LVVLRNFYQ 257 (307)
T ss_pred CCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc---hHHHHHHHH
Confidence 99999999999999987433555555 558998553 333445544
|
|
| >PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-12 Score=113.69 Aligned_cols=80 Identities=15% Similarity=0.260 Sum_probs=64.4
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
.+-+|||||++.||+.|||+| +++.+. .++..++.. ....++++||+||.+|.|+..++..|.+. ||++|
T Consensus 19 ~~~~lIDvR~~~ef~~ghIpG----AiniP~---~~l~~~l~~-l~~~~~~~IVlyC~~G~rS~~aa~~L~~~--G~~~v 88 (104)
T PRK10287 19 AAEHWIDVRVPEQYQQEHVQG----AINIPL---KEVKERIAT-AVPDKNDTVKLYCNAGRQSGQAKEILSEM--GYTHA 88 (104)
T ss_pred CCCEEEECCCHHHHhcCCCCc----cEECCH---HHHHHHHHh-cCCCCCCeEEEEeCCChHHHHHHHHHHHc--CCCeE
Confidence 355799999999999999998 565553 234444443 22356789999999999999999999987 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
++ .||+.+|.
T Consensus 89 ~~-~GG~~~~~ 98 (104)
T PRK10287 89 EN-AGGLKDIA 98 (104)
T ss_pred Ee-cCCHHHHh
Confidence 88 69999995
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.2e-12 Score=138.97 Aligned_cols=96 Identities=23% Similarity=0.345 Sum_probs=78.2
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.++++|+.+++++ +.++||||++.||+.|||+| +++.+. .++..++.. ....++++|
T Consensus 3 ~~is~~el~~~l~~--------------~~~ivDvR~~~e~~~ghIpg----Ai~ip~---~~l~~~~~~-~~~~~~~~I 60 (376)
T PRK08762 3 REISPAEARARAAQ--------------GAVLIDVREAHERASGQAEG----ALRIPR---GFLELRIET-HLPDRDREI 60 (376)
T ss_pred ceeCHHHHHHHHhC--------------CCEEEECCCHHHHhCCcCCC----CEECCH---HHHHHHHhh-hcCCCCCeE
Confidence 46899999999864 47999999999999999999 555542 233333332 112578999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||.+|.|+..|+..|++. ||+||+.|+||+.+|.+.
T Consensus 61 vvyC~~G~rs~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 98 (376)
T PRK08762 61 VLICASGTRSAHAAATLREL--GYTRVASVAGGFSAWKDA 98 (376)
T ss_pred EEEcCCCcHHHHHHHHHHHc--CCCceEeecCcHHHHHhc
Confidence 99999999999999999987 999999999999999864
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.5e-11 Score=116.39 Aligned_cols=167 Identities=22% Similarity=0.276 Sum_probs=108.6
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||++++...|. .+.+.|...++++.+|.|-. . . +. ...+
T Consensus 2 ~~vv~~hG~~~~~~~~~----~~~~~L~~~~~v~~~d~~g~--------G------~-------s~--~~~~-------- 46 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQ----ALIELLGPHFRCLAIDLPGH--------G------S-------SQ--SPDE-------- 46 (251)
T ss_pred CEEEEEcCCCCchhhHH----HHHHHhcccCeEEEEcCCCC--------C------C-------CC--CCCc--------
Confidence 57999999999999999 77777777799999997710 0 0 00 0000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHH-HHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAY-LKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~-L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++++.++. +..+++..+ ....|+|||+||.+|+.++.+. +..++++|+++
T Consensus 47 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~-----~~~v~~lil~~ 102 (251)
T TIGR03695 47 -------------------IERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQY-----PERVQGLILES 102 (251)
T ss_pred -------------------cChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhC-----chheeeeEEec
Confidence 012345666666 555555433 3447899999999999999854 34577888877
Q ss_pred CCCCCcc------------------------------------------c------------------------------
Q 007311 531 GFALHSA------------------------------------------E------------------------------ 538 (608)
Q Consensus 531 G~~~~~~------------------------------------------~------------------------------ 538 (608)
+.+.... .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (251)
T TIGR03695 103 GSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGK 182 (251)
T ss_pred CCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhc
Confidence 5432110 0
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl 604 (608)
.....+++|+++++|+ +|..++ +..+++.+.+.+ .+++..+ +||.+..+.+ ..+.|.+||
T Consensus 183 ~~~~~~~~~~~~~P~l~i~g~---~D~~~~-~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 183 QPSLWPKLQALTIPVLYLCGE---KDEKFV-QIAKEMQKLLPN--LTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred ccchHHHhhCCCCceEEEeeC---cchHHH-HHHHHHHhcCCC--CcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 0023578999999999 787764 566667776655 5555555 5998766433 344555554
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.4e-11 Score=131.15 Aligned_cols=175 Identities=16% Similarity=0.224 Sum_probs=115.3
Q ss_pred CccEEEEecCCCCChHHHHHH-HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGR-TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~-~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||||||++.+...|..+ +..|.+.+...++++.+|.| +.. . + +.+.
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~--------G~G------~-------S--------~~p~ 250 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLL--------GFG------R-------S--------PKPA 250 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCC--------CCC------C-------C--------cCCC
Confidence 346799999999999999854 35666655568999999988 110 0 0 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHH-HHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK-TIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~-~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
+ ....+++..+.+. .+++..+ ....|+||||||++|+.+|.+++ ..++++|
T Consensus 251 ------------~----------~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~P-----e~V~~LV 303 (481)
T PLN03087 251 ------------D----------SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHP-----GAVKSLT 303 (481)
T ss_pred ------------C----------CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhCh-----HhccEEE
Confidence 0 0113444445553 4555443 44579999999999999998653 4567777
Q ss_pred EecCCCC---C--------------------c---------------------------cc---------------c---
Q 007311 528 LCSGFAL---H--------------------S---------------------------AE---------------F--- 539 (608)
Q Consensus 528 lisG~~~---~--------------------~---------------------------~~---------------~--- 539 (608)
++++..- . . .+ .
T Consensus 304 Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 383 (481)
T PLN03087 304 LLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGF 383 (481)
T ss_pred EECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHH
Confidence 7653210 0 0 00 0
Q ss_pred -------c----------------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE-EeCCCCc
Q 007311 540 -------E----------------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII-EHDCGHI 589 (608)
Q Consensus 540 -------~----------------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv-~~~gGH~ 589 (608)
. ...|++|+|++||+ +|.++|++.++.+++.+++ ..++ ..+.||.
T Consensus 384 ~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge---~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~ 458 (481)
T PLN03087 384 FCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGG---DDELIPVECSYAVKAKVPR--ARVKVIDDKDHI 458 (481)
T ss_pred HhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEEC---CCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCc
Confidence 0 01478999999999 8999999999999999987 4444 4467998
Q ss_pred CCC--C-hhhHHHHHHHHHH
Q 007311 590 IPT--R-SPYIDEIKSFLQR 606 (608)
Q Consensus 590 ip~--~-~~~~~~i~~Fl~~ 606 (608)
.+. . ..+.+.|.+|+++
T Consensus 459 ~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 459 TIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred chhhcCHHHHHHHHHHHhhc
Confidence 653 2 3467788888753
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-12 Score=137.36 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=72.7
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++|+.+++++ .+.+|||||++.||+.|||++. ..+++.+...+.+....+.+..+. ++++
T Consensus 270 ~~~~~~~el~~~l~~-------------~~~~lIDVR~~~E~~~ghI~~~-~gAinIPl~~l~~~~~~~~~l~~~-~~~~ 334 (370)
T PRK05600 270 AARTDTTSLIDATLN-------------GSATLLDVREPHEVLLKDLPEG-GASLKLPLSAITDDADILHALSPI-DGDN 334 (370)
T ss_pred hcccCHHHHHHHHhc-------------CCeEEEECCCHHHhhhccCCCC-CccEeCcHHHhhcchhhhhhcccc-CCCc
Confidence 347899999999976 3578999999999999999841 015555533332211111221222 3349
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCc-EEEcCccHH
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFEN-VFQLYGGIQ 244 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~n-V~~L~GGi~ 244 (608)
|++||.+|.||.+|+.+|++. ||++ ||+|+|||.
T Consensus 335 Ivv~C~sG~RS~~Aa~~L~~~--G~~~~v~~l~GG~~ 369 (370)
T PRK05600 335 VVVYCASGIRSADFIEKYSHL--GHELTLHNLPGGVN 369 (370)
T ss_pred EEEECCCChhHHHHHHHHHHc--CCCCceEEeccccC
Confidence 999999999999999999997 9996 999999985
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.1e-11 Score=121.75 Aligned_cols=159 Identities=16% Similarity=0.166 Sum_probs=107.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++|||+||++.++..|. .+...|. .+++++.+|.|- +. . .+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~----~~~~~L~~~g~~vi~~dl~g--------~G---------------------~--s~ 60 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWY----KIRCLMENSGYKVTCIDLKS--------AG---------------------I--DQ 60 (273)
T ss_pred CCCCeEEEECCCCCCcCcHH----HHHHHHHhCCCEEEEecccC--------CC---------------------C--CC
Confidence 34568999999999999999 6666664 479999999881 00 0 00
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
. ++ ....++++..+.|.++++... ....|+||||||++++.++... +..++++
T Consensus 61 ~----------------~~----~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~-----p~~v~~l 115 (273)
T PLN02211 61 S----------------DA----DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRF-----PKKICLA 115 (273)
T ss_pred C----------------Cc----ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhC-----hhheeEE
Confidence 0 00 001245556667777776642 4557999999999999998744 3456666
Q ss_pred EEecCCCCC-----------------------------------cc-----c----------------------------
Q 007311 527 ILCSGFALH-----------------------------------SA-----E---------------------------- 538 (608)
Q Consensus 527 IlisG~~~~-----------------------------------~~-----~---------------------------- 538 (608)
|+++++.+. .. +
T Consensus 116 v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (273)
T PLN02211 116 VYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPIL 195 (273)
T ss_pred EEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCcc
Confidence 666443210 00 0
Q ss_pred --c------ccCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC
Q 007311 539 --F------EHRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593 (608)
Q Consensus 539 --~------~~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~ 593 (608)
. ....+ ++|++.|+|+ +|..+|++..+++.+.+.. ..++..++||....+
T Consensus 196 ~~~~~~~~~~~~~~~~vP~l~I~g~---~D~~ip~~~~~~m~~~~~~--~~~~~l~~gH~p~ls 254 (273)
T PLN02211 196 ALRSARFEEETGDIDKVPRVYIKTL---HDHVVKPEQQEAMIKRWPP--SQVYELESDHSPFFS 254 (273)
T ss_pred ccccccccccccccCccceEEEEeC---CCCCCCHHHHHHHHHhCCc--cEEEEECCCCCcccc
Confidence 0 01123 6899999999 8999999999999998875 455666799986553
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.1e-11 Score=127.00 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=45.6
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHH--HHHHHHhccCCcEEEEe-CC----CCcCCCChh-hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQAS--KELAKAFEEGCSVIIEH-DC----GHIIPTRSP-YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~--~~l~~~~~~~~~~vv~~-~g----GH~ip~~~~-~~~~i~~Fl~~ 606 (608)
..|++|+|+|+|+ +|.++|.+.+ +++++.+++. ++++. ++ ||.+...++ +.+.|.+||.+
T Consensus 289 ~~I~~PvLvI~G~---~D~~~p~~~~~~~~la~~ip~a--~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 289 EKIKAPVLAINSA---DDERNPPETGVMEAALKRVKHG--RLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQ 356 (360)
T ss_pred HhCCCCEEEEecC---CCcccChhhHHHHHHHHhCcCC--eEEEECCCCCCCCcccccCHHHHHHHHHHHHHh
Confidence 4689999999999 8999998876 7889998873 44443 43 998764333 67788888865
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.2e-11 Score=118.37 Aligned_cols=125 Identities=19% Similarity=0.281 Sum_probs=99.6
Q ss_pred cccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------
Q 007311 472 QQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------- 538 (608)
Q Consensus 472 ~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------- 538 (608)
+..++++.++++|++.-. .....+|.|+|+|+..++.+|.+ .++.++|+.|++......
T Consensus 110 n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr-------~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~ 181 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASR-------YPLAAVVLHSPFTSGMRVAFPDTKTTYCFDA 181 (258)
T ss_pred cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhc-------CCcceEEEeccchhhhhhhccCcceEEeecc
Confidence 346789999999888765 44566899999999999999883 238999999988754321
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc-CCCChhhHHHHHHHHHHh
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI-IPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~-ip~~~~~~~~i~~Fl~~~ 607 (608)
.....+++|+|++||+ +|.+|+...+.+|++.+++..--.+.+++||. +...+++++.+..|+...
T Consensus 182 f~~i~kI~~i~~PVLiiHgt---dDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 182 FPNIEKISKITCPVLIIHGT---DDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSV 252 (258)
T ss_pred ccccCcceeccCCEEEEecc---cCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence 2356789999999999 99999999999999999986344566677875 666668999999998753
|
|
| >cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4 | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.5e-12 Score=118.24 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=66.6
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
.+++|||||...||+.|||+| +++.+ ..++...+.+ ..++++||+||.+|.++..++..|+.. ||++|
T Consensus 10 ~~~~ivDvR~~~e~~~gHIpg----Ai~~~---~~~l~~~l~~---l~~~~~vVv~c~~g~~a~~aa~~L~~~--G~~~v 77 (145)
T cd01535 10 GQTAVVDVTASANYVKRHIPG----AWWVL---RAQLAQALEK---LPAAERYVLTCGSSLLARFAAADLAAL--TVKPV 77 (145)
T ss_pred CCeEEEECCCHHHHHcCCCCC----ceeCC---HHHHHHHHHh---cCCCCCEEEEeCCChHHHHHHHHHHHc--CCcCe
Confidence 468999999999999999999 55443 1234433333 346789999999999999999999987 99999
Q ss_pred EEcCccHHHHHHh
Q 007311 237 FQLYGGIQRYLEQ 249 (608)
Q Consensus 237 ~~L~GGi~~w~~~ 249 (608)
+.|.||+.+|..+
T Consensus 78 ~~L~GG~~aW~~~ 90 (145)
T cd01535 78 FVLEGGTAAWIAA 90 (145)
T ss_pred EEecCcHHHHHHC
Confidence 9999999999975
|
This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.4e-11 Score=126.46 Aligned_cols=165 Identities=19% Similarity=0.230 Sum_probs=109.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||++++...|. .+...|...++++.+|.|- .. .... .
T Consensus 131 ~~~vl~~HG~~~~~~~~~----~~~~~l~~~~~v~~~d~~g--------~G------------------~s~~-~----- 174 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNWL----FNHAALAAGRPVIALDLPG--------HG------------------ASSK-A----- 174 (371)
T ss_pred CCeEEEECCCCCccchHH----HHHHHHhcCCEEEEEcCCC--------CC------------------CCCC-C-----
Confidence 467999999999999999 6666666669999999881 10 0000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++....+.+.+++...+ ....|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 175 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----~~~v~~lv~~~ 229 (371)
T PRK14875 175 --------------------VGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARA-----PQRVASLTLIA 229 (371)
T ss_pred --------------------CCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhC-----chheeEEEEEC
Confidence 001235566666777776665 3457999999999999998853 44688888887
Q ss_pred CCCCCc---------------------------------c-------------c------------------------cc
Q 007311 531 GFALHS---------------------------------A-------------E------------------------FE 540 (608)
Q Consensus 531 G~~~~~---------------------------------~-------------~------------------------~~ 540 (608)
+..... . . ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (371)
T PRK14875 230 PAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDR 309 (371)
T ss_pred cCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHH
Confidence 642100 0 0 01
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
...+++|+|+++|+ +|.++|.+.++.+. .. ..+...+ +||......+ ..+.|.+||+
T Consensus 310 l~~i~~Pvlii~g~---~D~~vp~~~~~~l~----~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 310 LASLAIPVLVIWGE---QDRIIPAAHAQGLP----DG-VAVHVLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred HhcCCCCEEEEEEC---CCCccCHHHHhhcc----CC-CeEEEeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 23678999999999 89999987766543 22 4555555 7998765432 3445555554
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-10 Score=122.89 Aligned_cols=177 Identities=17% Similarity=0.133 Sum_probs=112.4
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++||++||++++...|. .++..| ..+++++.+|.| ++. . +.+.. . ....
T Consensus 54 ~~~vll~HG~~~~~~~y~----~~~~~l~~~g~~v~~~D~~--------G~G------~-S~~~~-~-~~~~-------- 104 (330)
T PRK10749 54 DRVVVICPGRIESYVKYA----ELAYDLFHLGYDVLIIDHR--------GQG------R-SGRLL-D-DPHR-------- 104 (330)
T ss_pred CcEEEEECCccchHHHHH----HHHHHHHHCCCeEEEEcCC--------CCC------C-CCCCC-C-CCCc--------
Confidence 457999999999998888 555444 357999999988 111 0 00000 0 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
....+++..++.+..+++.. .....++||||||++|+.++.+. +..+++
T Consensus 105 ---------------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~-----p~~v~~ 158 (330)
T PRK10749 105 ---------------------GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH-----PGVFDA 158 (330)
T ss_pred ---------------------CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC-----CCCcce
Confidence 00123444444444444432 23347999999999999998843 556788
Q ss_pred EEEecCCCCC---------------------------------------------ccc----------------------
Q 007311 526 AILCSGFALH---------------------------------------------SAE---------------------- 538 (608)
Q Consensus 526 vIlisG~~~~---------------------------------------------~~~---------------------- 538 (608)
+|++++.... ..+
T Consensus 159 lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (330)
T PRK10749 159 IALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTY 238 (330)
T ss_pred EEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcH
Confidence 8888764210 000
Q ss_pred --------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-----CcEEEEe-CCCCcCCCChh---
Q 007311 539 --------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-----CSVIIEH-DCGHIIPTRSP--- 595 (608)
Q Consensus 539 --------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-----~~~vv~~-~gGH~ip~~~~--- 595 (608)
.....+++|+|++||+ +|++++.+.++++++.++.. .++++.+ ++||.+..+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~---~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r 315 (330)
T PRK10749 239 HWVRESILAGEQVLAGAGDITTPLLLLQAE---EERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMR 315 (330)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEeC---CCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHH
Confidence 0124688999999999 89999999999998887531 2355555 56998765332
Q ss_pred --hHHHHHHHHHH
Q 007311 596 --YIDEIKSFLQR 606 (608)
Q Consensus 596 --~~~~i~~Fl~~ 606 (608)
..++|.+||.+
T Consensus 316 ~~v~~~i~~fl~~ 328 (330)
T PRK10749 316 SVALNAIVDFFNR 328 (330)
T ss_pred HHHHHHHHHHHhh
Confidence 55677888765
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-10 Score=121.16 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=108.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++||||||++.+...|. .+...|...++++.+|.| +..+ ..+.
T Consensus 34 ~~~iv~lHG~~~~~~~~~----~~~~~l~~~~~vi~~D~~G~G~S----------------------~~~~--------- 78 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYR----DIIVALRDRFRCVAPDYLGFGLS----------------------ERPS--------- 78 (286)
T ss_pred CCEEEEECCCCccHHHHH----HHHHHHhCCcEEEEECCCCCCCC----------------------CCCC---------
Confidence 467999999999999998 666667767999999988 1100 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
+ ....++...+.+..+++..+ ....|+|||+||++|+.++... +..++++|++
T Consensus 79 ------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~-----p~~v~~lvl~ 132 (286)
T PRK03204 79 ------------------G---FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVER-----ADRVRGVVLG 132 (286)
T ss_pred ------------------c---cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhC-----hhheeEEEEE
Confidence 0 00123444555555555544 3458999999999999999854 4567777776
Q ss_pred cCCC-CC-c---------------c----------c---------------------------------c---cc-----
Q 007311 530 SGFA-LH-S---------------A----------E---------------------------------F---EH----- 541 (608)
Q Consensus 530 sG~~-~~-~---------------~----------~---------------------------------~---~~----- 541 (608)
++.. +. . . . . ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (286)
T PRK03204 133 NTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARP 212 (286)
T ss_pred CccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhH
Confidence 5432 00 0 0 0 0 00
Q ss_pred --C---------CCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHH
Q 007311 542 --R---------SINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 542 --~---------~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl 604 (608)
. .+++|+|+|+|+ +|..+++. .++++++.+++. ..++..++||.++.+.+ ..+.|.+||
T Consensus 213 ~~~~~~~~~~~~~~~~PtliI~G~---~D~~~~~~~~~~~~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 213 LLARLAREVPATLGTKPTLLVWGM---KDVAFRPKTILPRLRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHhhhhhhhhcCCCCeEEEecC---CCcccCcHHHHHHHHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 0 127999999999 89988554 578888888873 33444568999877533 344555554
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-10 Score=126.30 Aligned_cols=181 Identities=15% Similarity=0.129 Sum_probs=113.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||++||++.+...|. .+++.|. .++.++.+|.+ .+. . +... ..+..
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~----~~a~~L~~~Gy~V~~~D~r--------GhG------~-------S~~~-~~~~~--- 185 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYL----HFAKQLTSCGFGVYAMDWI--------GHG------G-------SDGL-HGYVP--- 185 (395)
T ss_pred CceEEEEECCchHHHHHHH----HHHHHHHHCCCEEEEeCCC--------CCC------C-------CCCC-CCCCc---
Confidence 4568999999999988888 6666664 57999999987 110 0 0000 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.+....+++.+.++++.... .+....|+||||||.+|+.++. .+ .....++++|+.
T Consensus 186 -------------------~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p--~~~~~v~glVL~ 241 (395)
T PLN02652 186 -------------------SLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YP--SIEDKLEGIVLT 241 (395)
T ss_pred -------------------CHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-cc--CcccccceEEEE
Confidence 00011223333333332211 1223589999999999997764 21 112468888888
Q ss_pred cCCCCCcc-----------------------------------c--------------------------------cccC
Q 007311 530 SGFALHSA-----------------------------------E--------------------------------FEHR 542 (608)
Q Consensus 530 sG~~~~~~-----------------------------------~--------------------------------~~~~ 542 (608)
|++..... . ....
T Consensus 242 sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~ 321 (395)
T PLN02652 242 SPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFK 321 (395)
T ss_pred CcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcc
Confidence 77531000 0 0124
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCC---hhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTR---SPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~---~~~~~~i~~Fl~~~ 607 (608)
.+++|+|++||+ +|.++|++.++++++.+.....++..+++ +|.+..+ .+.++.+.+||.+.
T Consensus 322 ~I~vPvLIi~G~---~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 322 SVTVPFMVLHGT---ADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred cCCCCEEEEEeC---CCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 678999999999 89999999999998887654355666665 7986443 34788899999865
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.4e-10 Score=114.43 Aligned_cols=56 Identities=23% Similarity=0.455 Sum_probs=39.6
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl 604 (608)
.+++|+|+++|+ +|.+ +.+.++++.+.++. .+++.. ++||....+.+ +.+.|.+||
T Consensus 229 ~i~~P~lii~G~---~D~~-~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 229 EIKVPTLLTVGE---FDTM-TPEAAREMQELIAG--SRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred ccCCCEEEEecC---CCcc-CHHHHHHHHHhccC--CeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 578999999999 7874 66788888888776 444444 57998776432 444555554
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.3e-10 Score=123.22 Aligned_cols=63 Identities=19% Similarity=0.370 Sum_probs=44.3
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHHhC
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQRFL 608 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~~L 608 (608)
..+++|+++|+|+ +|.+.+ ..+.++.+........++..++||.+..+.+ +.+.|.+|++.||
T Consensus 322 ~~I~vP~liI~G~---~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 322 SEWKVPTTFIYGR---HDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred ccCCCCEEEEEeC---CCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 4578999999999 787665 5565666555433234445567999777644 6788898888775
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.9e-10 Score=121.58 Aligned_cols=171 Identities=15% Similarity=0.126 Sum_probs=113.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
++.||||||++++...|. .+...|.+.++++.+|.| |..+ +.+.
T Consensus 127 ~~~ivllHG~~~~~~~w~----~~~~~L~~~~~Via~DlpG~G~S------------------------------~~p~- 171 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYR----KVLPVLSKNYHAIAFDWLGFGFS------------------------------DKPQ- 171 (383)
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhcCCEEEEECCCCCCCC------------------------------CCCc-
Confidence 467999999999999999 555566667999999988 1110 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.. ......++...+.|.+++++.+ ....|+|+|+||++|+.++..+ +..++++|++
T Consensus 172 ---------------~~---~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~-----P~~v~~lILi 228 (383)
T PLN03084 172 ---------------PG---YGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAH-----PDKIKKLILL 228 (383)
T ss_pred ---------------cc---ccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhC-----hHhhcEEEEE
Confidence 00 0001246666777777777654 3457999999999999999854 3456777776
Q ss_pred cCCCCCc----------------------------------------cc----------------------------cc-
Q 007311 530 SGFALHS----------------------------------------AE----------------------------FE- 540 (608)
Q Consensus 530 sG~~~~~----------------------------------------~~----------------------------~~- 540 (608)
++..+.. .+ ..
T Consensus 229 ~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l 308 (383)
T PLN03084 229 NPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKEL 308 (383)
T ss_pred CCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhccc
Confidence 6432100 00 00
Q ss_pred ------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 541 ------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 541 ------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
...+++|+|+|+|+ +|.+++.+.++++.+.. +. ..++..++||.++.+.+ ..+.|.+||.
T Consensus 309 ~~~~~~l~~~l~~~~i~vPvLiI~G~---~D~~v~~~~~~~~a~~~-~a-~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 309 KKYIEEMRSILTDKNWKTPITVCWGL---RDRWLNYDGVEDFCKSS-QH-KLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred chhhHHHHhhhccccCCCCEEEEeeC---CCCCcCHHHHHHHHHhc-CC-eEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 02368999999999 89999999888888874 31 33444467999877543 4566666664
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-11 Score=131.15 Aligned_cols=94 Identities=20% Similarity=0.370 Sum_probs=72.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
..++++++.++. .+.+|||||++.||+.|||+| +++.+...+.. .... ...+++++|
T Consensus 261 ~~i~~~~~~~~~---------------~~~~IIDVR~~~ef~~ghIpg----Ainip~~~l~~---~~~~-~~~~~~~~I 317 (355)
T PRK05597 261 EVLDVPRVSALP---------------DGVTLIDVREPSEFAAYSIPG----AHNVPLSAIRE---GANP-PSVSAGDEV 317 (355)
T ss_pred cccCHHHHHhcc---------------CCCEEEECCCHHHHccCcCCC----CEEeCHHHhhh---cccc-ccCCCCCeE
Confidence 467888887443 357999999999999999999 55544222111 0000 123578999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
++||.+|.|+.+|+..|++. ||+||+.|+||+.+|.+
T Consensus 318 vvyC~~G~rS~~Aa~~L~~~--G~~nV~~L~GGi~~W~~ 354 (355)
T PRK05597 318 VVYCAAGVRSAQAVAILERA--GYTGMSSLDGGIEGWLD 354 (355)
T ss_pred EEEcCCCHHHHHHHHHHHHc--CCCCEEEecCcHHHHhh
Confidence 99999999999999999987 99999999999999975
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=114.34 Aligned_cols=159 Identities=17% Similarity=0.147 Sum_probs=98.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|.||+|||++++...+.... .|.+.+. .++.+++||.+-... ......|+...
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~-~~~~~a~~~g~~Vv~Pd~~g~~~----------------------~~~~~~~~~~~ 67 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDW-GWKAAADRYGFVLVAPEQTSYNS----------------------SNNCWDWFFTH 67 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhc-ChHHHHHhCCeEEEecCCcCccc----------------------cCCCCCCCCcc
Confidence 34688999999999998775221 1333332 468899888772110 00122444311
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. ... ......++.+.++++.+..........|+||||||.+|+.++.+. +..+++++.
T Consensus 68 ~-------------~~~----~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~~~ 125 (212)
T TIGR01840 68 H-------------RAR----GTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTY-----PDVFAGGAS 125 (212)
T ss_pred c-------------cCC----CCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhC-----chhheEEEe
Confidence 0 000 001233455555555543222223557999999999999999853 456889999
Q ss_pred ecCCCCCccc--------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 529 CSGFALHSAE--------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 529 isG~~~~~~~--------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
+||....... ........|++++||. +|.+||++.++++.+.+..
T Consensus 126 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~---~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 126 NAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPIMSVVHGD---ADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred ecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCCCCeEEEEEcC---CCceeCcchHHHHHHHHHH
Confidence 9987642110 0011233446799999 8999999999999988875
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.7e-10 Score=122.96 Aligned_cols=62 Identities=19% Similarity=0.152 Sum_probs=48.8
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEE-Ee-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVII-EH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv-~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
..|++|+|+|+|+ +|.++|++.++++++.+.+.. ..++ .. +.||..+...+ +.+.|.+||++
T Consensus 306 ~~I~~PtLvI~G~---~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 306 ARIKARFLVVSFT---SDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred hcCCCCEEEEEEC---CccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 3678999999999 899999999999999998742 1333 43 68999766543 67888888875
|
|
| >cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.9e-11 Score=109.29 Aligned_cols=110 Identities=18% Similarity=0.249 Sum_probs=74.9
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccc-ccC--C------CchH-HHHhhh
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEI-RQF--S------DLPT-WIDNNA 201 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~-~~~--~------~~~~-~~~~~~ 201 (608)
|+|++++++|++. +++++|||||...||+.|||+++....+.... +.. . .++. ...+.+
T Consensus 2 is~~~l~~~l~~~-----------~~~~~iiDvR~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 70 (132)
T cd01446 2 IDCAWLAALLREG-----------GERLLLLDCRPFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRL 70 (132)
T ss_pred cCHHHHHHHHhcC-----------CCCEEEEECCCHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHH
Confidence 7899999999752 24799999999999999999985432222100 000 0 0100 011111
Q ss_pred hhcCCCeEEEEcCCCcc---------HHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 202 EQLQGKHVLMYCTGGIR---------CEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 202 ~~~k~k~Iv~yCtgGiR---------~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
...++++||+||.+|.+ ...+..+|.....++.+|+.|+||+.+|.+.+|.
T Consensus 71 ~~~~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~~~p~ 130 (132)
T cd01446 71 RRGESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSSEFPE 130 (132)
T ss_pred hcCCCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHhhCcc
Confidence 22368899999998876 6677777776201678999999999999999875
|
This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-09 Score=113.11 Aligned_cols=199 Identities=14% Similarity=0.101 Sum_probs=118.1
Q ss_pred CccEEEEecCCCCChHHHHHH--HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQNASSFKGR--TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~--~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+.|+|++|||++++.+.|..+ +..++.. .++.+|+||++..-. +..+. ...-..+....|+...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~--~g~~Vv~Pd~~~~g~---------~~~~~---~~~w~~g~~~~~~~d~ 106 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAE--HGLALVAPDTSPRGT---------GIAGE---DDAWDFGKGAGFYVDA 106 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhh--cCcEEEEeCCCCCcC---------CCCCC---cccccccCCccccccC
Confidence 358999999999999988643 2334332 368999999752110 00000 0000000112333210
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
. .++. ...........+.|..++++. .....|+|+||||.+|+.++.+. +..++
T Consensus 107 ~---------------~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~-----p~~~~ 164 (275)
T TIGR02821 107 T---------------EEPW--SQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN-----PDRFK 164 (275)
T ss_pred C---------------cCcc--cccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC-----cccce
Confidence 0 0000 000111222234444445442 23457999999999999999854 55688
Q ss_pred EEEEecCCCCCccc---------------c-----------ccCCCCCCEEEEEcCCCCCCcccch-HHHHHHHHHhccC
Q 007311 525 FAILCSGFALHSAE---------------F-----------EHRSINCPSLHIFGGDLGNDRQVAN-QASKELAKAFEEG 577 (608)
Q Consensus 525 ~vIlisG~~~~~~~---------------~-----------~~~~i~~PvL~i~G~~~~~D~~Vp~-~~~~~l~~~~~~~ 577 (608)
+++++++...+... . .......|++++||+ +|+.++. ..+..+.+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~---~D~~v~~~~~~~~~~~~l~~~ 241 (275)
T TIGR02821 165 SVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGT---ADQFLDEQLRPDAFEQACRAA 241 (275)
T ss_pred EEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecC---CCcccCccccHHHHHHHHHHc
Confidence 99998887422100 0 011356789999999 8999998 5667777777643
Q ss_pred --CcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 578 --CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 578 --~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
..++..+++ +|.+..-...+.+.++|+.+.+
T Consensus 242 g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 242 GQALTLRRQAGYDHSYYFIASFIADHLRHHAERL 275 (275)
T ss_pred CCCeEEEEeCCCCccchhHHHhHHHHHHHHHhhC
Confidence 256666776 9999877788899999988764
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.1e-10 Score=119.85 Aligned_cols=176 Identities=21% Similarity=0.271 Sum_probs=113.8
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++.||++||||+|...|..++..|.+.. +..+..+|-| ++. ...|.+.
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~--~~~v~aiDl~--------G~g------------------~~s~~~~-- 105 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAK--GLRVLAIDLP--------GHG------------------YSSPLPR-- 105 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhcccccccc--ceEEEEEecC--------CCC------------------cCCCCCC--
Confidence 456779999999999999995544444332 3889999977 100 1122220
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE-
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI- 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI- 527 (608)
+.. -.+.+.+..+.+.+.+.. ....|+|||+||.+|+.+|..+ +..++.+|
T Consensus 106 ------------~~~----------y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~-----P~~V~~lv~ 158 (326)
T KOG1454|consen 106 ------------GPL----------YTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYY-----PETVDSLVL 158 (326)
T ss_pred ------------CCc----------eehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhC-----cccccceee
Confidence 001 123444555555555543 2257999999999999999965 44566666
Q ss_pred --EecCCCCCcc-c------------------------------------------------------------------
Q 007311 528 --LCSGFALHSA-E------------------------------------------------------------------ 538 (608)
Q Consensus 528 --lisG~~~~~~-~------------------------------------------------------------------ 538 (608)
+++....... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (326)
T KOG1454|consen 159 LDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHR 238 (326)
T ss_pred ecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhh
Confidence 2222111100 0
Q ss_pred ------------------cccCCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--h
Q 007311 539 ------------------FEHRSIN-CPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--Y 596 (608)
Q Consensus 539 ------------------~~~~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~ 596 (608)
....++. +|+|++||+ +|+++|.+.++.+.+.+++ +++++- ++||....+.+ .
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~---~D~~~p~~~~~~~~~~~pn--~~~~~I~~~gH~~h~e~Pe~~ 313 (326)
T KOG1454|consen 239 DARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGD---KDQIVPLELAEELKKKLPN--AELVEIPGAGHLPHLERPEEV 313 (326)
T ss_pred hheeeEEEeccCccchHHHhhccccCCceEEEEcC---cCCccCHHHHHHHHhhCCC--ceEEEeCCCCcccccCCHHHH
Confidence 0123445 999999999 8999999999999998854 555444 58998766433 6
Q ss_pred HHHHHHHHHHh
Q 007311 597 IDEIKSFLQRF 607 (608)
Q Consensus 597 ~~~i~~Fl~~~ 607 (608)
+..|..|+++.
T Consensus 314 ~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 314 AALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHHh
Confidence 77888888764
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.4e-10 Score=120.05 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=80.8
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc----------c----------------c--------
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS----------A----------------E-------- 538 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~----------~----------------~-------- 538 (608)
...+|+|||+||.+|+.+|... +..++++|++++..... + .
T Consensus 265 ~ri~l~G~S~GG~~Al~~A~~~-----p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l 339 (414)
T PRK05077 265 TRVAAFGFRFGANVAVRLAYLE-----PPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGMHDASDEALRVEL 339 (414)
T ss_pred ccEEEEEEChHHHHHHHHHHhC-----CcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHh
Confidence 4568999999999999999742 45789999988764210 0 0
Q ss_pred ---c------ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 539 ---F------EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 539 ---~------~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
. ...++++|+|+|||+ +|+++|.+.++.+.+..++ .++++.++.|.+......++.+.+||++.|
T Consensus 340 ~~~sl~~~~~l~~~i~~PvLiI~G~---~D~ivP~~~a~~l~~~~~~--~~l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 340 NRYSLKVQGLLGRRCPTPMLSGYWK---NDPFSPEEDSRLIASSSAD--GKLLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred hhccchhhhhhccCCCCcEEEEecC---CCCCCCHHHHHHHHHhCCC--CeEEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 0 013588999999999 8999999999999888765 566666666666555568899999998765
|
|
| >PRK11784 tRNA 2-selenouridine synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.5e-11 Score=126.45 Aligned_cols=97 Identities=20% Similarity=0.387 Sum_probs=72.0
Q ss_pred CHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCC---------------------
Q 007311 133 SAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS--------------------- 191 (608)
Q Consensus 133 sp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~--------------------- 191 (608)
...+|.+++. ++++|||||++.||..|||+|+ +|.|..+..
T Consensus 4 ~~~~~~~~~~--------------~~~~lIDVRsp~Ef~~ghIpgA----iniPl~~~~er~~vgt~Ykq~g~~~a~~lg 65 (345)
T PRK11784 4 DAQDFRALFL--------------NDTPLIDVRSPIEFAEGHIPGA----INLPLLNDEERAEVGTCYKQQGQFAAIALG 65 (345)
T ss_pred cHHHHHHHHh--------------CCCEEEECCCHHHHhcCCCCCe----eeCCCCChhHHHhhchhhcccCHHHHHHhh
Confidence 4678888764 3689999999999999999994 444432110
Q ss_pred ------CchHHHHhhhhh--cCCCeEEEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 192 ------DLPTWIDNNAEQ--LQGKHVLMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 192 ------~~~~~~~~~~~~--~k~k~Iv~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
+++..+.+.... .++++|++|| +||.||..++.+|+.. || +|+.|.||+.+|....
T Consensus 66 ~~lv~~~l~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~--G~-~v~~L~GG~~awr~~~ 130 (345)
T PRK11784 66 HALVAGNIAAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEA--GI-DVPRLEGGYKAYRRFV 130 (345)
T ss_pred hhhcchhHHHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHc--CC-CcEEEcCCHHHHHHhh
Confidence 122222221111 2789999999 6999999999999986 99 6999999999998653
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-10 Score=120.35 Aligned_cols=59 Identities=25% Similarity=0.211 Sum_probs=43.8
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE---EEe-CCCCcCCCChh--hHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI---IEH-DCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v---v~~-~gGH~ip~~~~--~~~~i~~Fl 604 (608)
.|++|+|+|+|+ +|.++|.+.++++++.+++....+ ... +.||..+.+.+ +.+.|.+||
T Consensus 286 ~I~~P~Lvi~G~---~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL 350 (351)
T TIGR01392 286 RIKAPFLVVSIT---SDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFL 350 (351)
T ss_pred hCCCCEEEEEeC---CccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHh
Confidence 568999999999 899999999999999998753332 133 57999776432 445555555
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.4e-10 Score=140.73 Aligned_cols=179 Identities=20% Similarity=0.310 Sum_probs=115.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.||||||++++...|. .+.+.|.+.++++.+|.| ++.+-..+..
T Consensus 1370 ~~~~vVllHG~~~s~~~w~----~~~~~L~~~~rVi~~Dl~-----------------------------G~G~S~~~~~ 1416 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWI----PIMKAISGSARCISIDLP-----------------------------GHGGSKIQNH 1416 (1655)
T ss_pred CCCeEEEECCCCCCHHHHH----HHHHHHhCCCEEEEEcCC-----------------------------CCCCCCCccc
Confidence 3468999999999999999 556666667999999987 1111000000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. .+ +. ......++...+.|.++++..+ ....|+||||||++|+.++.++ +..++++|++
T Consensus 1417 ~-----~~-------~~---~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~-----P~~V~~lVli 1476 (1655)
T PLN02980 1417 A-----KE-------TQ---TEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRF-----SDKIEGAVII 1476 (1655)
T ss_pred c-----cc-------cc---ccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhC-----hHhhCEEEEE
Confidence 0 00 00 0001235556666666666543 3457999999999999999854 4567788877
Q ss_pred cCCCCCcc------------------------------------------c-----------------------------
Q 007311 530 SGFALHSA------------------------------------------E----------------------------- 538 (608)
Q Consensus 530 sG~~~~~~------------------------------------------~----------------------------- 538 (608)
++.+.... .
T Consensus 1477 s~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1556 (1655)
T PLN02980 1477 SGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGR 1556 (1655)
T ss_pred CCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcc
Confidence 65421100 0
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC----------CcEEEEe-CCCCcCCCChh--hHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG----------CSVIIEH-DCGHIIPTRSP--YIDEI 600 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~----------~~~vv~~-~gGH~ip~~~~--~~~~i 600 (608)
.....+++|+|+|+|+ +|..++ +.++++.+.+.+. ..++++. ++||.++.+.+ +.+.|
T Consensus 1557 ~~dl~~~L~~I~~PtLlI~Ge---~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I 1632 (1655)
T PLN02980 1557 QPSLWEDLKQCDTPLLLVVGE---KDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRAL 1632 (1655)
T ss_pred cchHHHHHhhCCCCEEEEEEC---CCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHH
Confidence 0124678999999999 898775 6677787777652 1344444 56999766533 67788
Q ss_pred HHHHHH
Q 007311 601 KSFLQR 606 (608)
Q Consensus 601 ~~Fl~~ 606 (608)
.+||.+
T Consensus 1633 ~~FL~~ 1638 (1655)
T PLN02980 1633 RKFLTR 1638 (1655)
T ss_pred HHHHHh
Confidence 888865
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.1e-10 Score=112.45 Aligned_cols=181 Identities=20% Similarity=0.179 Sum_probs=117.5
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+..+-+|+++||+|...+.+. ..++++|. .++.+..+|-. ++.. ++ +..+...
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~---~~~a~~l~~~g~~v~a~D~~--------GhG~----Sd----------Gl~~yi~- 104 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRY---QSTAKRLAKSGFAVYAIDYE--------GHGR----SD----------GLHAYVP- 104 (313)
T ss_pred CCCceEEEEEcCCcccchhhH---HHHHHHHHhCCCeEEEeecc--------CCCc----CC----------CCcccCC-
Confidence 355678999999999985433 15666665 58899988865 2110 00 0111111
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
.| +..+++...++.....+. +...-++|+||||+|++.++++. +.-..
T Consensus 105 ----------------~~--------d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----p~~w~ 155 (313)
T KOG1455|consen 105 ----------------SF--------DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-----PNFWD 155 (313)
T ss_pred ----------------cH--------HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-----Ccccc
Confidence 11 122333444444333222 22225899999999999999853 44566
Q ss_pred EEEEecCCCCCccc------------------------------------------------------------------
Q 007311 525 FAILCSGFALHSAE------------------------------------------------------------------ 538 (608)
Q Consensus 525 ~vIlisG~~~~~~~------------------------------------------------------------------ 538 (608)
|+|+++.-.....+
T Consensus 156 G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~ 235 (313)
T KOG1455|consen 156 GAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVT 235 (313)
T ss_pred cceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHH
Confidence 67765554332211
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCC--Chh----hHHHHHHHHHHh
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPT--RSP----YIDEIKSFLQRF 607 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~--~~~----~~~~i~~Fl~~~ 607 (608)
.....+.+|.|++||+ .|.+..++.++.|++.......++..++| =|.+-. .++ +..+|.+||.++
T Consensus 236 ~~le~~l~~vtvPflilHG~---dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 236 ADLEKNLNEVTVPFLILHGT---DDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHhcccccccEEEEecC---CCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 2456889999999999 89999999999999999877788888887 687542 222 567889998764
|
|
| >TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.4e-11 Score=124.16 Aligned_cols=86 Identities=22% Similarity=0.320 Sum_probs=64.4
Q ss_pred CcEEEecCChhhhhccccCCCCccccCcccccCC---------------------------CchHHHHhhhh-hcCCCeE
Q 007311 158 KLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS---------------------------DLPTWIDNNAE-QLQGKHV 209 (608)
Q Consensus 158 ~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~---------------------------~~~~~~~~~~~-~~k~k~I 209 (608)
+.+|||||++.||+.|||+| ++|.|..+.. .++..+++... ..++++|
T Consensus 2 ~~~liDVRsp~Ef~~ghipg----AiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~~~~~~v 77 (311)
T TIGR03167 2 FDPLIDVRSPAEFAEGHLPG----AINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFADGPPQP 77 (311)
T ss_pred CCEEEECCCHHHHhcCCCcC----CEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhcCCCCcE
Confidence 46899999999999999999 4444432110 13333333222 2345569
Q ss_pred EEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 210 LMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 210 v~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
|+|| ++|.||..++.+|++. || +|+.|.||+.+|....
T Consensus 78 vvyC~~gG~RS~~aa~~L~~~--G~-~v~~L~GG~~aw~~~~ 116 (311)
T TIGR03167 78 LLYCWRGGMRSGSLAWLLAQI--GF-RVPRLEGGYKAYRRFV 116 (311)
T ss_pred EEEECCCChHHHHHHHHHHHc--CC-CEEEecChHHHHHHhh
Confidence 9999 5899999999999987 99 7999999999998764
|
The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.1e-09 Score=109.31 Aligned_cols=177 Identities=17% Similarity=0.201 Sum_probs=124.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
...|.+|+||||=.+--+|..|+..|+.. .++++++|-+ ++.--+.|.
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~~---~~rviA~Dlr-----------------------------GyG~Sd~P~ 89 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLASR---GYRVIAPDLR-----------------------------GYGFSDAPP 89 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhhc---ceEEEecCCC-----------------------------CCCCCCCCC
Confidence 34578999999999999999888777654 4999999876 111101010
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. .....+...+..+..+|+..+ ....++||++||++|..+|+.+ +..++++|.
T Consensus 90 ----------------~-----~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~-----Perv~~lv~ 143 (322)
T KOG4178|consen 90 ----------------H-----ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFY-----PERVDGLVT 143 (322)
T ss_pred ----------------C-----cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhC-----hhhcceEEE
Confidence 0 012245566666777777766 4457999999999999999954 567888888
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++..+....
T Consensus 144 ~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~ 223 (322)
T KOG4178|consen 144 LNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAF 223 (322)
T ss_pred ecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHH
Confidence 8766551100
Q ss_pred ----------------------------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEeCCCCc
Q 007311 539 ----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 539 ----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
.....+.+|+++++|. +|++.+.. .+...+..+......++..++||+
T Consensus 224 ~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~---~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~ 300 (322)
T KOG4178|consen 224 YVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGD---LDPVLPYPIFGELYRKDVPRLTERVVIEGIGHF 300 (322)
T ss_pred HHhccccccccccchhhHHHhhCchhccccccccccceEEEEec---CcccccchhHHHHHHHhhccccceEEecCCccc
Confidence 0234688999999999 89998776 344455555554456666778999
Q ss_pred CCCChh--hHHHHHHHHHHh
Q 007311 590 IPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 590 ip~~~~--~~~~i~~Fl~~~ 607 (608)
+..+.+ ..+.+..||.++
T Consensus 301 vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 301 VQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccCHHHHHHHHHHHHHhh
Confidence 987754 678899999875
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-09 Score=116.03 Aligned_cols=61 Identities=18% Similarity=0.162 Sum_probs=46.3
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-C-CCCcCCCChh--hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-D-CGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~-gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.++++|+|+++|+ +|.++|.+.++++.+.+... ..+++. + +||.++.+.+ +...|.+||.+
T Consensus 274 ~~I~~PtLvi~G~---~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 274 EAIRVPTVVVAVE---GDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hcCCCCeEEEEeC---CCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 4678999999999 89999999999998887433 344444 3 7999877543 56777788764
|
|
| >PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-10 Score=117.66 Aligned_cols=101 Identities=23% Similarity=0.265 Sum_probs=73.9
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCC----------hhhhhccccCCCCccccCcccccCC--------
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARN----------LYETRIGKFRTPSVETLDPEIRQFS-------- 191 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn----------~~E~~~Gh~~g~~~~~l~~~~~~~~-------- 191 (608)
.-++++++++.+++ ++++|||||+ +.||..|||+|+. +.+...+.
T Consensus 5 ~lvs~~~l~~~l~~-------------~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~----~~~~~~~~~~~~~~~~ 67 (281)
T PRK11493 5 WFVAADWLAEHIDD-------------PEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAV----FFDIEALSDHTSPLPH 67 (281)
T ss_pred cccCHHHHHHhcCC-------------CCeEEEEeeCCCCCccccchHHHHHhCcCCCCE----EcCHHHhcCCCCCCCC
Confidence 45899999999965 5799999997 6889999999954 32211111
Q ss_pred Cc--hHHHHhh---hhhcCCCeEEEEcCCCcc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 192 DL--PTWIDNN---AEQLQGKHVLMYCTGGIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 192 ~~--~~~~~~~---~~~~k~k~Iv~yCtgGiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+ ++.+.+. +...++++||+||.+|.+ +.++...|+.. ||+||+.|.||+.+|.++
T Consensus 68 ~~~~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~--G~~~v~~l~GG~~~W~~~ 129 (281)
T PRK11493 68 MMPRPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTF--GVEKVSILAGGLAGWQRD 129 (281)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHh--cCCcEEEcCCCHHHHHHc
Confidence 11 2223322 234689999999999876 45666778775 999999999999999864
|
|
| >PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.3e-10 Score=129.77 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=77.0
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCc------ccc-cC---CCchHHHHh
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP------EIR-QF---SDLPTWIDN 199 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~------~~~-~~---~~~~~~~~~ 199 (608)
..|++++++++|++ ++++|||||+..||..|||+|+....++. +.. .+ .+|...+.+
T Consensus 9 ~lIs~~eL~~~l~~-------------~~vvIIDvR~~~eY~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~ 75 (610)
T PRK09629 9 LVIEPNDLLERLDA-------------PELILVDLTSSARYEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGE 75 (610)
T ss_pred ceecHHHHHHHhcC-------------CCEEEEECCChHHHHhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHH
Confidence 46899999999976 47999999999999999999954221110 000 01 112222322
Q ss_pred hhhhcCCCeEEEEcCCC-ccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 200 NAEQLQGKHVLMYCTGG-IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 200 ~~~~~k~k~Iv~yCtgG-iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+...++++||+||.+| .++.++...|+.. ||++|+.|.||+.+|..+
T Consensus 76 -lGI~~d~~VVvYd~~g~~~A~R~~w~L~~~--G~~~V~iLdGG~~aW~~a 123 (610)
T PRK09629 76 -LGHNPDAVYVVYDDEGGGWAGRFIWLLDVI--GHSGYHYLDGGVLAWEAQ 123 (610)
T ss_pred -cCCCCCCEEEEECCCCCchHHHHHHHHHHc--CCCCEEEcCCCHHHHHHc
Confidence 3457899999999976 5777888888886 999999999999999875
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-09 Score=113.87 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=48.7
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eC-CCCcCCCC--hhhHHHHHHHHHHhC
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HD-CGHIIPTR--SPYIDEIKSFLQRFL 608 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~-gGH~ip~~--~~~~~~i~~Fl~~~L 608 (608)
+|++|+|+|+|+ +|..+|.+.++.+++.+++ .++++ .+ .||..... +.+...|.+||+++|
T Consensus 273 ~I~~PtLvI~G~---~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 273 SITAKTFVMPIS---TDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred cCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 478999999999 8999999999999998877 44444 44 69976554 347888999998875
|
|
| >KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.4e-10 Score=114.61 Aligned_cols=181 Identities=19% Similarity=0.310 Sum_probs=123.3
Q ss_pred HHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCCCCCCCccccCCccccceeeecceee
Q 007311 34 SNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVT 113 (608)
Q Consensus 34 ~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~~~~~~~~~~~~F~~l~vr~~~eiv~ 113 (608)
..|.+-|+.|-| -|+| |++.++|...-.+.-.+.|++-..-++.- ...|+.+++|-+++=..
T Consensus 221 t~C~dgGVlGpv-------~Gvi-G~mQALE~iKli~~~~~~~s~~lllfdg~----------~~~~r~irlR~r~~~C~ 282 (427)
T KOG2017|consen 221 TNCADGGVLGPV-------TGVI-GCMQALETIKLIAGIGESLSGRLLLFDGL----------SGHFRTIRLRSRRPKCA 282 (427)
T ss_pred cccccCceeecc-------hhhh-hHHHHHHHHHHHHccCccCCcceEEEecc----------cceeEEEEeccCCCCCc
Confidence 457777877754 3555 57788887766665567777655444422 22588888887765322
Q ss_pred -cCCCCCCC------------CC-----CCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhcccc
Q 007311 114 -FSSHPLLN------------PP-----DVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKF 175 (608)
Q Consensus 114 -~~~~~~~~------------~~-----~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~ 175 (608)
.|.++.+. .. .....-..||..||+++++++ ...++||||...||+|.|+
T Consensus 283 ~Cg~n~tit~~~dYe~fCg~~~~~~~~l~lL~~~~Rvsv~d~k~il~~~------------~~h~llDvRp~~~~eI~~l 350 (427)
T KOG2017|consen 283 VCGKNPTITSLIDYELFCGSSATDKCPLKLLEPDERVSVTDYKRILDSG------------AKHLLLDVRPSHEYEICRL 350 (427)
T ss_pred ccCCCCccCcccchhcccCCccccccchhcCChhhcccHHHHHHHHhcC------------CCeEEEeccCcceEEEEec
Confidence 12222110 00 011224578999999999874 6789999999999999999
Q ss_pred CCCCccccCcccccCCCchHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 176 RTPSVETLDPEIRQFSDLPTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 176 ~g~~~~~l~~~~~~~~~~~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
+. ++|.++.. ++....+.+ .....++|++.|+.|+-|.+|+.+||++ .+..+|.-+.||..+|..++..
T Consensus 351 P~----avNIPL~~---l~~~~~~~~~~~~~~~~~~I~ViCrrGNdSQ~Av~~Lre~-~~~~~vrDvigGl~~w~~~vd~ 422 (427)
T KOG2017|consen 351 PE----AVNIPLKE---LRSRSGKKLQGDLNTESKDIFVICRRGNDSQRAVRILREK-FPDSSVRDVIGGLKAWAAKVDP 422 (427)
T ss_pred cc----ccccchhh---hhhhhhhhhcccccccCCCEEEEeCCCCchHHHHHHHHhh-CCchhhhhhhhHHHHHHHhcCc
Confidence 98 66665332 322211111 1235678999999999999999999997 4566899999999999988754
|
|
| >cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.9e-10 Score=104.33 Aligned_cols=105 Identities=21% Similarity=0.120 Sum_probs=72.1
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh--------hhhhc------------cccCCCCccccCcc---cc
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL--------YETRI------------GKFRTPSVETLDPE---IR 188 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~--------~E~~~------------Gh~~g~~~~~l~~~---~~ 188 (608)
+|++++.+.+++. ..+++++|||+|.. .||.. |||+|+....+... ..
T Consensus 1 vs~e~l~~~l~~~---------~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~ 71 (138)
T cd01445 1 KSTEQLAENLEAG---------KVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAG 71 (138)
T ss_pred CCHHHHHHHhhcc---------ccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCC
Confidence 5788999998741 01257999999977 88887 99999642211100 00
Q ss_pred cC-CCch--HHHHhh---hhhcCCCeEEEEcCC---CccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 189 QF-SDLP--TWIDNN---AEQLQGKHVLMYCTG---GIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 189 ~~-~~~~--~~~~~~---~~~~k~k~Iv~yCtg---GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
.+ ..+| +.+.+. +...++++||+||.+ |.++.++.-.|+.. |++||+.|.||+.+|+
T Consensus 72 ~~~~~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~--G~~~v~ildGG~~~W~ 137 (138)
T cd01445 72 FEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLC--GHPDVAILDGGFFEWF 137 (138)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHc--CCCCeEEeCCCHHHhh
Confidence 01 1122 122222 244678999999976 78888887788775 9999999999999996
|
Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.4e-09 Score=101.00 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 478 DVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
.++++.+.+.|++..+ ...|+|-|+||..|+.++.+.. ++. |++++...+...
T Consensus 43 ~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~-------~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~ 114 (187)
T PF05728_consen 43 EEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG-------LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYE 114 (187)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC-------CCE-EEEcCCCCHHHHHHHhhCccccCCCCccce
Confidence 4567778888877653 3689999999999999998542 444 566655433211
Q ss_pred ------c-------ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 539 ------F-------EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 539 ------~-------~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
. .......++++++|+ .|.+++.+.+ .+.+.. ...+++.+|+|.+-.-.+++..|++|+
T Consensus 115 ~~~~~~~~l~~l~~~~~~~~~~~lvll~~---~DEvLd~~~a---~~~~~~-~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 115 LTEEHIEELKALEVPYPTNPERYLVLLQT---GDEVLDYREA---VAKYRG-CAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred echHhhhhcceEeccccCCCccEEEEEec---CCcccCHHHH---HHHhcC-ceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 0 012345789999999 8999997444 344444 367788888999988788899999987
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.2e-09 Score=108.91 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++|+|++||. +|.++|.+.++++++.+++ ..+++. ++||... .++.+++|.+|+..||
T Consensus 248 ~~P~lii~g~---~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~-~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 248 NIPTYIVHGR---YDLCCPLQSAWALHKAFPE--AELKVTNNAGHSAF-DPNNLAALVHALETYL 306 (306)
T ss_pred CCCeEEEecC---CCCCCCHHHHHHHHHhCCC--CEEEEECCCCCCCC-ChHHHHHHHHHHHHhC
Confidence 5899999999 8999999999999999876 455555 5699974 5678999999999886
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1e-08 Score=106.41 Aligned_cols=202 Identities=13% Similarity=0.117 Sum_probs=112.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccC-CccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHEL-PFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.|++|||++++...|.... .+.+.+. ..+.+|.+|++..= .+... .+ .-....+..|+..
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~-~~~~~~~~~g~~Vv~pd~~~~g~~~~~~--------~~-----~~~~~~~~~~~~~ 110 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKS-GAQRAAAARGIALVAPDTSPRGLNVEGE--------AD-----SWDFGVGAGFYLN 110 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhh-hHHHHHhhcCeEEEecCCCCCCCCCCCC--------cc-----ccccCCCcceeec
Confidence 45689999999999998886332 3333333 46888999876210 00000 00 0000001122221
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.. ...|. ..++ .+.-.++...++.+.+.. .....+|+|+||||.+|+.++.+. +..++++
T Consensus 111 ~~-----~~~~~-------~~~~--~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~-----p~~~~~~ 171 (283)
T PLN02442 111 AT-----QEKWK-------NWRM--YDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKN-----PDKYKSV 171 (283)
T ss_pred cc-----cCCCc-------ccch--hhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhC-----chhEEEE
Confidence 00 00110 0000 011123333344444332 234457999999999999999853 5568889
Q ss_pred EEecCCCCCcc-------------------c--------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccC-
Q 007311 527 ILCSGFALHSA-------------------E--------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG- 577 (608)
Q Consensus 527 IlisG~~~~~~-------------------~--------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~- 577 (608)
+++++...+.. + ......++|+++++|+ +|..++.. .++.+++.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~---~D~~v~~~~~s~~~~~~l~~~g 248 (283)
T PLN02442 172 SAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGE---ADKFLKEQLLPENFEEACKEAG 248 (283)
T ss_pred EEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECC---CCccccccccHHHHHHHHHHcC
Confidence 99998853210 0 0122468999999999 89998863 356666666532
Q ss_pred -CcEEEEeCC-CCcCCCChhhHHHHHHHHHHh
Q 007311 578 -CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 578 -~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~ 607 (608)
..++.++++ +|.+..-...+++...|..++
T Consensus 249 ~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 249 APVTLRLQPGYDHSYFFIATFIDDHINHHAQA 280 (283)
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHHHHHH
Confidence 256666666 898764444555555555543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.2e-09 Score=121.43 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=47.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.+++|+|+|+|+ +|+++|.+..+.+++.+.. ..++..++||..+.+.+ +.+.|.+|+..
T Consensus 231 ~~~~P~lii~G~---~D~~v~~~~~~~~~~~~~~--~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 231 YTDVPVQLIVPT---GDPYVRPALYDDLSRWVPR--LWRREIKAGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred CccCceEEEEeC---CCcccCHHHhccccccCCc--ceEEEccCCCcchhhChhHHHHHHHHHHHh
Confidence 378999999999 8999999999988877765 55666678999876543 56778888764
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.6e-10 Score=109.51 Aligned_cols=107 Identities=21% Similarity=0.247 Sum_probs=72.4
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC-CCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHH
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG-FALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELA 571 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG-~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~ 571 (608)
...+++|||+||.+|+.++.. ...++++|...| ..+.........+++|+++++|+ +|+.++.+..+++.
T Consensus 98 ~kig~vGfc~GG~~a~~~a~~------~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~---~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 98 GKIGVVGFCWGGKLALLLAAR------DPRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGE---NDPFFPPEEVEALE 168 (218)
T ss_dssp EEEEEEEETHHHHHHHHHHCC------TTTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEET---T-TTS-HHHHHHHH
T ss_pred CcEEEEEEecchHHhhhhhhh------ccccceEEEEcCCCCCCcchhhhcccCCCEeecCcc---CCCCCChHHHHHHH
Confidence 456899999999999998862 246899999888 23333334567899999999999 89999999988888
Q ss_pred HHhcc--CCcEEEEeCC-CCcCCCChh----------hHHHHHHHHHHhC
Q 007311 572 KAFEE--GCSVIIEHDC-GHIIPTRSP----------YIDEIKSFLQRFL 608 (608)
Q Consensus 572 ~~~~~--~~~~vv~~~g-GH~ip~~~~----------~~~~i~~Fl~~~L 608 (608)
+.+.. ...++..|++ +|.+-.... -.+.+.+||++.|
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 88843 2477888875 898644321 2456778887765
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.3e-09 Score=107.50 Aligned_cols=177 Identities=20% Similarity=0.273 Sum_probs=116.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+..||++||||..-..|..-+..|++ ...+.++|-| + ++ .+.+|.|.
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~----~~~vyaiDll--------G------~G-------~SSRP~F~------ 136 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK----IRNVYAIDLL--------G------FG-------RSSRPKFS------ 136 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh----cCceEEeccc--------C------CC-------CCCCCCCC------
Confidence 4456699999999999988866666665 6889999987 0 00 01111111
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.|+ +....+.++.+++.-.+.+ ....|+|||+||.+|+.+|+.+ +.+++.+|+
T Consensus 137 ---------------~d~------~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKy-----PerV~kLiL 190 (365)
T KOG4409|consen 137 ---------------IDP------TTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKY-----PERVEKLIL 190 (365)
T ss_pred ---------------CCc------ccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhC-----hHhhceEEE
Confidence 111 1122355555666655555 4447999999999999999954 677999999
Q ss_pred ecCCCCCc---cc-------------------------------------------------------------------
Q 007311 529 CSGFALHS---AE------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~---~~------------------------------------------------------------------- 538 (608)
++++.-.. .+
T Consensus 191 vsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~ 270 (365)
T KOG4409|consen 191 VSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNA 270 (365)
T ss_pred ecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcC
Confidence 99775322 00
Q ss_pred ------------------------cccC--CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE-EEeCCCCcCC
Q 007311 539 ------------------------FEHR--SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI-IEHDCGHIIP 591 (608)
Q Consensus 539 ------------------------~~~~--~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v-v~~~gGH~ip 591 (608)
.... +-.+|++.|||+ +..+....+.++.+.+....+++ ++.++||.+-
T Consensus 271 ~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~----~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvy 346 (365)
T KOG4409|consen 271 QNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGD----RDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVY 346 (365)
T ss_pred CCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecC----cccccchhHHHHHHHhhcccceEEEecCCCceee
Confidence 1111 225999999998 66788888888877644333444 4556799876
Q ss_pred CChh--hHHHHHHHHHHh
Q 007311 592 TRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 592 ~~~~--~~~~i~~Fl~~~ 607 (608)
.+.+ +++.|..++...
T Consensus 347 lDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 347 LDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cCCHHHHHHHHHHHHhcc
Confidence 6644 677777777653
|
|
| >PLN02723 3-mercaptopyruvate sulfurtransferase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=115.38 Aligned_cols=102 Identities=22% Similarity=0.231 Sum_probs=73.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--------C-hhhhhccccCCCCccccCcccccCC--------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--------N-LYETRIGKFRTPSVETLDPEIRQFS-------- 191 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--------n-~~E~~~Gh~~g~~~~~l~~~~~~~~-------- 191 (608)
...|+++++++++++ ++++||||| + ..||..|||+|+. +.+...+.
T Consensus 21 ~~lvs~~~L~~~l~~-------------~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi----~i~~~~~~~~~~~~~~ 83 (320)
T PLN02723 21 EPVVSVDWLHANLRE-------------PDVKVLDASWYMPDEQRNPIQEYQVAHIPGAL----FFDLDGISDRTTDLPH 83 (320)
T ss_pred CceecHHHHHHHhcC-------------CCeEEEEeeccccCCCCchHHHHHhccCCCCe----ecCHHHhcCCCCCcCC
Confidence 467999999999965 579999996 3 3789999999954 32211111
Q ss_pred Cch--HHHHhh---hhhcCCCeEEEEcCCCccH-HHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 192 DLP--TWIDNN---AEQLQGKHVLMYCTGGIRC-EMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 192 ~~~--~~~~~~---~~~~k~k~Iv~yCtgGiR~-~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+| +.+.+. +...++++||+||.+|.+. .++...|+.. ||+||+.|.||+.+|.++
T Consensus 84 ~lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~--G~~~V~~LdGG~~~W~~~ 145 (320)
T PLN02723 84 MLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVF--GHEKVWVLDGGLPKWRAS 145 (320)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHc--CCCceEEcCCCHHHHHHc
Confidence 111 222222 2345789999999888765 5666678776 999999999999999874
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.5e-09 Score=112.63 Aligned_cols=61 Identities=23% Similarity=0.286 Sum_probs=42.7
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEE-eCCCCcCCCChh--------hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIE-HDCGHIIPTRSP--------YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--------~~~~i~~Fl~~~ 607 (608)
..|++|+|+|+|. +|+++|.+.. ..+.+..++ ..++. .++||....+.+ ..+.+.+||...
T Consensus 295 ~~I~vPtLiI~g~---dDpi~p~~~~~~~~~~~~p~--~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 295 KHVRVPLLCIQAA---NDPIAPARGIPREDIKANPN--CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred ccCCCCeEEEEcC---CCCcCCcccCcHhHHhcCCC--EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 4688999999999 8999997655 344455554 55554 457998655433 268888998754
|
|
| >PLN02723 3-mercaptopyruvate sulfurtransferase | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.6e-10 Score=115.91 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=75.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-----------hccccCCCCccccCcccccCCC----c-
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-----------RIGKFRTPSVETLDPEIRQFSD----L- 193 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-----------~~Gh~~g~~~~~l~~~~~~~~~----~- 193 (608)
..++.+++.+.++. ++++|||+|+..|| ..|||+|+ ++.+...+.+ |
T Consensus 190 ~~~~~~~v~~~~~~-------------~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgA----vnip~~~~~~~~~~~~ 252 (320)
T PLN02723 190 LVWTLEQVKKNIED-------------KTYQHIDARSKARFDGAAPEPRKGIRSGHIPGS----KCVPFPQMLDSSQTLL 252 (320)
T ss_pred ceecHHHHHHhhcC-------------CCeEEEECCCcccccCCCCCCCCCCcCCcCCCC----cccCHHHhcCCCCCCC
Confidence 34688888888754 46889999999888 56999994 4433221111 1
Q ss_pred -hHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 194 -PTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 194 -~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.+++.. ...++++||+||.+|+|+..+...|+.. ||+||+.+.||+..|...
T Consensus 253 ~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~--G~~~v~~YdGs~~eW~~~ 310 (320)
T PLN02723 253 PAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRL--GKTDVPVYDGSWTEWGAL 310 (320)
T ss_pred CHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHc--CCCCeeEeCCCHHHHhcC
Confidence 12233322 3468999999999999999999999876 999999999999999865
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.5e-08 Score=105.35 Aligned_cols=61 Identities=15% Similarity=0.182 Sum_probs=43.5
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcE-EEEeCCCCcCCCCh------h-hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSV-IIEHDCGHIIPTRS------P-YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~-vv~~~gGH~ip~~~------~-~~~~i~~Fl~~~ 607 (608)
..+++|+|+|+|+ +|++++.+....+.+..++ .. ++..++||....+- . ..+.+.+|+..+
T Consensus 252 ~~i~~P~lii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 252 NQIRKPTLIIHAK---DDPFMTHEVIPKPESLPPN--VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred hCCCCCEEEEecC---CCCCCChhhChHHHHhCCC--eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 5778999999999 8999998888777666554 44 34456799754321 1 346778888654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.5e-09 Score=102.69 Aligned_cols=126 Identities=23% Similarity=0.299 Sum_probs=87.4
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------- 538 (608)
.++.+++++|.+.-..+..+.+|+|+|+||.+|+.++.+. +..++++|..+|.......
T Consensus 46 ~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~-----~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~ 120 (213)
T PF00326_consen 46 DDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH-----PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYG 120 (213)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT-----CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHS
T ss_pred hhHHHHHHHHhccccccceeEEEEcccccccccchhhccc-----ceeeeeeeccceecchhcccccccccccccccccC
Confidence 3344444444332212335568999999999999999843 5678999998886543210
Q ss_pred ---------------cccCC--CCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCCh---h
Q 007311 539 ---------------FEHRS--INCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTRS---P 595 (608)
Q Consensus 539 ---------------~~~~~--i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~~---~ 595 (608)
..... +++|+|++||+ +|.+||++.+.++.+.+... ..+++.++ .||.+.... .
T Consensus 121 ~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~---~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 121 DPWDNPEFYRELSPISPADNVQIKPPVLIIHGE---NDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp STTTSHHHHHHHHHGGGGGGCGGGSEEEEEEET---TBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHH
T ss_pred ccchhhhhhhhhccccccccccCCCCEEEEccC---CCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHH
Confidence 11233 78999999999 89999999999999988753 35666655 599776532 2
Q ss_pred hHHHHHHHHHHhC
Q 007311 596 YIDEIKSFLQRFL 608 (608)
Q Consensus 596 ~~~~i~~Fl~~~L 608 (608)
..+.+.+||.+.|
T Consensus 198 ~~~~~~~f~~~~l 210 (213)
T PF00326_consen 198 WYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 5788899998765
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.3e-08 Score=106.05 Aligned_cols=58 Identities=12% Similarity=0.228 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh---hhHHHHHHHHH
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS---PYIDEIKSFLQ 605 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~---~~~~~i~~Fl~ 605 (608)
++|+|+++|+ +|++++.+.++++++.+......++.++ ++|.+..+. +.++.+.+||.
T Consensus 270 ~~P~Lii~G~---~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSK---GDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeC---CCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 6899999999 8999999999998877654336666665 489987653 35677777775
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-08 Score=99.74 Aligned_cols=156 Identities=18% Similarity=0.250 Sum_probs=98.3
Q ss_pred CccEEEEecCCCCChHHHHHHH--HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQNASSFKGRT--ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~--~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+.|.||+|||.+++++.|...+ ..|++. .++-+++|+...... ...-..|+...
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~--~GfivvyP~~~~~~~----------------------~~~cw~w~~~~ 70 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADR--EGFIVVYPEQSRRAN----------------------PQGCWNWFSDD 70 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhc--CCeEEEcccccccCC----------------------CCCcccccccc
Confidence 4578999999999999998654 234332 467788887653211 01123454411
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.. .+. .....+...++++......+..++.+.|+|.||+|+..++..+ +..|.++..
T Consensus 71 ~~-----------~g~-------~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~-----pd~faa~a~ 127 (220)
T PF10503_consen 71 QQ-----------RGG-------GDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY-----PDLFAAVAV 127 (220)
T ss_pred cc-----------cCc-------cchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC-----CccceEEEe
Confidence 00 000 1122345555555444433455667999999999999999844 667888888
Q ss_pred ecCCCCCccc-------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 529 CSGFALHSAE-------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 529 isG~~~~~~~-------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
.||....... .....-..|++++||+ .|.+|.+..+.++.+.+..
T Consensus 128 ~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~~~P~~v~hG~---~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 128 VSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYPGYPRIVFHGT---ADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred ecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCCCCCEEEEecC---CCCccCcchHHHHHHHHHH
Confidence 8876532110 0011224799999999 8999999988887776653
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.1e-08 Score=98.57 Aligned_cols=170 Identities=18% Similarity=0.183 Sum_probs=120.6
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccCC-cEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKNI-AEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~~-~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+|+|+|+.|+++..|. .|++.|+.. ..++.++.|..-. +
T Consensus 2 ~lf~~p~~gG~~~~y~----~la~~l~~~~~~v~~i~~~~~~~------------------------------~------ 41 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYR----PLARALPDDVIGVYGIEYPGRGD------------------------------D------ 41 (229)
T ss_dssp EEEEESSTTCSGGGGH----HHHHHHTTTEEEEEEECSTTSCT------------------------------T------
T ss_pred eEEEEcCCccCHHHHH----HHHHhCCCCeEEEEEEecCCCCC------------------------------C------
Confidence 6999999999999999 999999986 9999998882100 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCC--ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGP--FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~--~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++++.++...+.|....+ ...|+|||.||.+|+.+|.+.+. ....+..++++.
T Consensus 42 ------------------~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~--~G~~v~~l~liD 101 (229)
T PF00975_consen 42 ------------------EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEE--AGEEVSRLILID 101 (229)
T ss_dssp ------------------SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHH--TT-SESEEEEES
T ss_pred ------------------CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHH--hhhccCceEEec
Confidence 01234677777777777765322 24899999999999999998874 256788999999
Q ss_pred CCCCCccc------------------------------------------------cc-cCCC---CCCEEEEEcCCCCC
Q 007311 531 GFALHSAE------------------------------------------------FE-HRSI---NCPSLHIFGGDLGN 558 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------~~-~~~i---~~PvL~i~G~~~~~ 558 (608)
+++|.... .. ...+ .+|..+.+.. .
T Consensus 102 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 178 (229)
T PF00975_consen 102 SPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYAL---D 178 (229)
T ss_dssp CSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEEC---S
T ss_pred CCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecC---C
Confidence 88774310 01 1122 3457777777 6
Q ss_pred CcccchH---HHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 559 DRQVANQ---ASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 559 D~~Vp~~---~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
|+..... ...++.+.+... ..++..+|+|..... +.+.+|.++|.+.|
T Consensus 179 ~~~~~~~~~~~~~~W~~~~~~~-~~~~~v~G~H~~~l~-~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 179 DPLVSMDRLEEADRWWDYTSGD-VEVHDVPGDHFSMLK-PHVAEIAEKIAEWL 229 (229)
T ss_dssp SSSSSHHCGGHHCHHHGCBSSS-EEEEEESSETTGHHS-TTHHHHHHHHHHHH
T ss_pred CccccchhhhhHHHHHHhcCCC-cEEEEEcCCCcEecc-hHHHHHHHHHhccC
Confidence 7766544 333466666654 778888999997666 77888888887654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.9e-08 Score=101.40 Aligned_cols=175 Identities=17% Similarity=0.171 Sum_probs=111.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+||++||++....-+. .|+..|. .++.++..|-| ++. .++ ++.+
T Consensus 35 g~Vvl~HG~~Eh~~ry~----~la~~l~~~G~~V~~~D~R--------GhG--------~S~------r~~r-------- 80 (298)
T COG2267 35 GVVVLVHGLGEHSGRYE----ELADDLAARGFDVYALDLR--------GHG--------RSP------RGQR-------- 80 (298)
T ss_pred cEEEEecCchHHHHHHH----HHHHHHHhCCCEEEEecCC--------CCC--------CCC------CCCc--------
Confidence 68999999999998888 6666665 68999999987 111 000 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
+..+ ....+...++.+.+.+.. .+....|+||||||.+|+.++... ..+++++|+.
T Consensus 81 -----------g~~~------~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~-----~~~i~~~vLs 138 (298)
T COG2267 81 -----------GHVD------SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY-----PPRIDGLVLS 138 (298)
T ss_pred -----------CCch------hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC-----CccccEEEEE
Confidence 0000 011122222333333332 234448999999999999999854 4677788887
Q ss_pred cCCCCCc--------------------------c----c-----------------------------------------
Q 007311 530 SGFALHS--------------------------A----E----------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~--------------------------~----~----------------------------------------- 538 (608)
|+..... . .
T Consensus 139 sP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~ 218 (298)
T COG2267 139 SPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV 218 (298)
T ss_pred CccccCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc
Confidence 7654322 0 0
Q ss_pred ---cccCCCCCCEEEEEcCCCCCCcccc-hHHHHHHHHHhccCCcEEEEeCC-CCcCCCChh-----hHHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGDLGNDRQVA-NQASKELAKAFEEGCSVIIEHDC-GHIIPTRSP-----YIDEIKSFLQR 606 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~~~~D~~Vp-~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~-----~~~~i~~Fl~~ 606 (608)
.....+.+|+|+++|+ +|++++ .+.+.++.+.......+++.+++ -|.+-.+++ ..+.+.+||.+
T Consensus 219 ~~~~~~~~~~~PvLll~g~---~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 219 PALRDAPAIALPVLLLQGG---DDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred cchhccccccCCEEEEecC---CCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 1134678999999999 899999 68888877777765456666655 798765543 45566666654
|
|
| >PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3e-09 Score=110.22 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=65.3
Q ss_pred CCcEEEecCChhhhh-----------ccccCCCCccccCcccccCCC-----chHHHHhhh---hhcCCCeEEEEcCCCc
Q 007311 157 KKLVLLDARNLYETR-----------IGKFRTPSVETLDPEIRQFSD-----LPTWIDNNA---EQLQGKHVLMYCTGGI 217 (608)
Q Consensus 157 ~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~~~~~~-----~~~~~~~~~---~~~k~k~Iv~yCtgGi 217 (608)
.+++|||+|...||. .|||+|+ ++.+...+.+ -++.+++.+ ...++++||+||.+|+
T Consensus 167 ~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA----~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~ 242 (281)
T PRK11493 167 KTAQIVDARPAARFNAEVDEPRPGLRRGHIPGA----LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGV 242 (281)
T ss_pred CCcEEEeCCCccceeeeccCCCCCcccccCCCc----CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHH
Confidence 468999999999984 6999994 4433222211 133343322 2357899999999999
Q ss_pred cHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 218 RCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 218 R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
|+..+..+|+.. ||+||+.+.||+..|..
T Consensus 243 ~A~~~~~~l~~~--G~~~v~~y~Gs~~eW~~ 271 (281)
T PRK11493 243 TAAVVVLALATL--DVPNVKLYDGAWSEWGA 271 (281)
T ss_pred HHHHHHHHHHHc--CCCCceeeCCCHHHHcc
Confidence 999999999876 99999999999999985
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.3e-08 Score=94.82 Aligned_cols=115 Identities=20% Similarity=0.184 Sum_probs=76.4
Q ss_pred HHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC-ccc----------cccCCCCCCEEE
Q 007311 482 AYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH-SAE----------FEHRSINCPSLH 550 (608)
Q Consensus 482 ~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~-~~~----------~~~~~i~~PvL~ 550 (608)
..|.+.|.....-..|+|||.|+..++.++.. ....+++++++++++-+. ... .....+.+|.++
T Consensus 44 ~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~----~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~v 119 (171)
T PF06821_consen 44 QALDQAIDAIDEPTILVAHSLGCLTALRWLAE----QSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIV 119 (171)
T ss_dssp HHHHHCCHC-TTTEEEEEETHHHHHHHHHHHH----TCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEE
T ss_pred HHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhh----cccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEE
Confidence 34555555444445899999999999999952 346789999999999874 111 122356788999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh-hhHHHHHHHHH
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS-PYIDEIKSFLQ 605 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~-~~~~~i~~Fl~ 605 (608)
|.++ +|+.+|.+.++++++.+.. ..+..-++||+...+- ....++.+.|+
T Consensus 120 iaS~---nDp~vp~~~a~~~A~~l~a--~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 120 IASD---NDPYVPFERAQRLAQRLGA--ELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EEET---TBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EEcC---CCCccCHHHHHHHHHHcCC--CeEECCCCCCcccccCCCchHHHHHHhc
Confidence 9999 9999999999999999964 4445556799975421 13445555544
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.3e-08 Score=103.88 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=101.6
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
...+.||++||++.+...|. .+.+.|. .++.++.+|.+-..+ ....
T Consensus 50 g~~PvVv~lHG~~~~~~~y~----~l~~~Las~G~~VvapD~~g~~~------------------------~~~~----- 96 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYS----QLLQHIASHGFIVVAPQLYTLAG------------------------PDGT----- 96 (313)
T ss_pred CCCCEEEEECCCCCCcccHH----HHHHHHHhCCCEEEEecCCCcCC------------------------CCch-----
Confidence 44578999999999998888 5555554 368999988651000 0000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--------CCceEEEecChhHHHHHHHHHHHhhhhCC
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--------GPFDGILGFSQGAAMAASVCAQWERLKGE 520 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--------~~~~~IlGFSQGa~vAl~la~~~~~~~~~ 520 (608)
...++..+.++++.+.+... ....+|+|||+||.+|+.+|....+....
T Consensus 97 -----------------------~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~ 153 (313)
T PLN00021 97 -----------------------DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLP 153 (313)
T ss_pred -----------------------hhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccc
Confidence 01123445566666544321 13457999999999999999865432223
Q ss_pred CCccEEEEecCCCCCc---------cc--cccCCCCCCEEEEEcCCCCCC-----cccc----hHH-HHHHHHHhccCCc
Q 007311 521 IDFRFAILCSGFALHS---------AE--FEHRSINCPSLHIFGGDLGND-----RQVA----NQA-SKELAKAFEEGCS 579 (608)
Q Consensus 521 ~~l~~vIlisG~~~~~---------~~--~~~~~i~~PvL~i~G~~~~~D-----~~Vp----~~~-~~~l~~~~~~~~~ 579 (608)
.+++++|++....-.. .. .....+.+|+|++.+. .| ..+| ... ..++.+.++....
T Consensus 154 ~~v~ali~ldPv~g~~~~~~~~p~il~~~~~s~~~~~P~liig~g---~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~ 230 (313)
T PLN00021 154 LKFSALIGLDPVDGTSKGKQTPPPVLTYAPHSFNLDIPVLVIGTG---LGGEPRNPLFPPCAPDGVNHAEFFNECKAPAV 230 (313)
T ss_pred cceeeEEeeccccccccccCCCCcccccCcccccCCCCeEEEecC---CCcccccccccccCCCCCCHHHHHHhcCCCee
Confidence 4688889887643211 00 1233478999999888 44 2222 333 3678888877656
Q ss_pred EEEEeCCCCc
Q 007311 580 VIIEHDCGHI 589 (608)
Q Consensus 580 ~vv~~~gGH~ 589 (608)
.++..++||.
T Consensus 231 ~~~~~~~gH~ 240 (313)
T PLN00021 231 HFVAKDYGHM 240 (313)
T ss_pred eeeecCCCcc
Confidence 7777788997
|
|
| >PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.9e-09 Score=119.02 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=76.2
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh--------ccccCCCCccccCccc---ccCCCchHHHH
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR--------IGKFRTPSVETLDPEI---RQFSDLPTWID 198 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~--------~Gh~~g~~~~~l~~~~---~~~~~~~~~~~ 198 (608)
..++.+++.+.+++ ++++|||+|++.||. .|||+|+.+....... ..|.. ++.+.
T Consensus 147 ~~v~~e~v~~~l~~-------------~~~~iIDaR~~~ef~G~~~~~~r~GHIPGAvnip~~~~~~~~~~lk~-~~el~ 212 (610)
T PRK09629 147 PTATREYLQSRLGA-------------ADLAIWDARAPTEYSGEKVVAAKGGHIPGAVNFEWTAGMDKARNLRI-RQDMP 212 (610)
T ss_pred ccccHHHHHHhhCC-------------CCcEEEECCCccccCCcccccccCCCCCCCeecCHHHhcCCCCCCCC-HHHHH
Confidence 45788998888865 478899999999994 7999995432211000 01111 22233
Q ss_pred hh---hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 199 NN---AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 199 ~~---~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+. ....++++||+||.+|.|+..+...|+.. ||+||+.+.||+..|...
T Consensus 213 ~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~l--G~~~V~~YdGsw~eW~~~ 264 (610)
T PRK09629 213 EILRDLGITPDKEVITHCQTHHRSGFTYLVAKAL--GYPRVKAYAGSWGEWGNH 264 (610)
T ss_pred HHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHc--CCCCcEEeCCCHHHHhCC
Confidence 22 23468999999999999999999999876 999999999999999865
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1e-07 Score=96.23 Aligned_cols=190 Identities=17% Similarity=0.210 Sum_probs=124.6
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
|.||++|++.+-...++ .+++.|. .++.++.||.=..-. . +.... ....++..
T Consensus 28 P~VIv~hei~Gl~~~i~----~~a~rlA~~Gy~v~~Pdl~~~~~------~----------~~~~~--~~~~~~~~---- 81 (236)
T COG0412 28 PGVIVLHEIFGLNPHIR----DVARRLAKAGYVVLAPDLYGRQG------D----------PTDIE--DEPAELET---- 81 (236)
T ss_pred CEEEEEecccCCchHHH----HHHHHHHhCCcEEEechhhccCC------C----------CCccc--ccHHHHhh----
Confidence 88999999999998887 5555554 478888777332111 0 00000 00011110
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
+-.......+...++...+++|.+.-......++++|||+||.+|+.++.. .+.+++.|.+-|
T Consensus 82 -----------~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------~~~v~a~v~fyg 144 (236)
T COG0412 82 -----------GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR------APEVKAAVAFYG 144 (236)
T ss_pred -----------hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc------cCCccEEEEecC
Confidence 000000002234556666666655543334557899999999999999973 226999999999
Q ss_pred CCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCCh-----h--------
Q 007311 532 FALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRS-----P-------- 595 (608)
Q Consensus 532 ~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~-----~-------- 595 (608)
...........++++|+|+.+|+ .|..+|.+.-..+.+.+... ...+..+.+ .|.+.... .
T Consensus 145 ~~~~~~~~~~~~~~~pvl~~~~~---~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~ 221 (236)
T COG0412 145 GLIADDTADAPKIKVPVLLHLAG---EDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAED 221 (236)
T ss_pred CCCCCcccccccccCcEEEEecc---cCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHH
Confidence 88765544567999999999999 89999999999999988875 466777776 49876431 1
Q ss_pred hHHHHHHHHHHhC
Q 007311 596 YIDEIKSFLQRFL 608 (608)
Q Consensus 596 ~~~~i~~Fl~~~L 608 (608)
-.+++.+||++.|
T Consensus 222 a~~~~~~ff~~~~ 234 (236)
T COG0412 222 AWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHHHHHHHhc
Confidence 3467777877654
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=7e-08 Score=110.72 Aligned_cols=107 Identities=25% Similarity=0.310 Sum_probs=78.0
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc------------------------c--------cc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------------------------E--------FE 540 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------------------------~--------~~ 540 (608)
.+.+|.|+|.||.|+++++.+. + .++++|...+...... + ..
T Consensus 473 ~ri~i~G~SyGGymtl~~~~~~-----~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 546 (620)
T COG1506 473 ERIGITGGSYGGYMTLLAATKT-----P-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFY 546 (620)
T ss_pred HHeEEeccChHHHHHHHHHhcC-----c-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhh
Confidence 4558999999999999999842 2 5777766655321110 0 12
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEe-CCCCcCCCChh---hHHHHHHHHHHhC
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEH-DCGHIIPTRSP---YIDEIKSFLQRFL 608 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~-~gGH~ip~~~~---~~~~i~~Fl~~~L 608 (608)
..++++|+|+|||+ +|..+|.+.+.++.+.++..+ ++++++ +.||.+..... ...++.+||++.|
T Consensus 547 ~~~i~~P~LliHG~---~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 547 ADNIKTPLLLIHGE---EDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred hcccCCCEEEEeec---CCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 35789999999999 899999999999999998532 455666 55999877432 5678888887754
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-07 Score=100.95 Aligned_cols=61 Identities=18% Similarity=0.236 Sum_probs=46.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeC--CCCcCCCChh--hHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHD--CGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~--gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.+++|+|+|+|+ +|.++|.+.++++.+.++. ...++++.+ .||..+...+ +.+.|.+||.+
T Consensus 321 ~I~~PtLvI~G~---~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCK---QDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeC---CCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 579999999999 8999999999999999863 125555443 6998765432 56677777754
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.9e-08 Score=100.89 Aligned_cols=103 Identities=23% Similarity=0.240 Sum_probs=71.4
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc--------------------------c-------
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA--------------------------E------- 538 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~--------------------------~------- 538 (608)
+...++.|.||||.+++.+|.+ ..++++++..-++..... +
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaL------d~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~ 247 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAAL------DPRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFE 247 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH------SST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHH
T ss_pred cceEEEEeecCchHHHHHHHHh------CccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHH
Confidence 3445799999999999999986 346888888655542210 0
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhh-HHHHHHHHHH
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPY-IDEIKSFLQR 606 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~-~~~i~~Fl~~ 606 (608)
.-..+|++|+++..|- .|+++|+...-.+++.+... .+++.+. .||..+. .. .++..+||.+
T Consensus 248 ~L~Y~D~~nfA~ri~~pvl~~~gl---~D~~cPP~t~fA~yN~i~~~-K~l~vyp~~~He~~~--~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 248 TLSYFDAVNFARRIKCPVLFSVGL---QDPVCPPSTQFAAYNAIPGP-KELVVYPEYGHEYGP--EFQEDKQLNFLKE 319 (320)
T ss_dssp HHHTT-HHHHGGG--SEEEEEEET---T-SSS-HHHHHHHHCC--SS-EEEEEETT--SSTTH--HHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHcCCCEEEEEec---CCCCCCchhHHHHHhccCCC-eeEEeccCcCCCchh--hHHHHHHHHHHhc
Confidence 1246899999999999 89999999999999999865 6666665 5898855 54 7889999976
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.5e-07 Score=95.42 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=75.2
Q ss_pred cHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc------------------
Q 007311 476 GLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------------------ 537 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------------------ 537 (608)
++.+++++|.+... ..+...++|+|+||.+|+.++.. ...++++|+++++.....
T Consensus 84 d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 84 DIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA------DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh------CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 44555554443211 11445799999999999988752 346899999988743110
Q ss_pred ---c----------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH-----HHH
Q 007311 538 ---E----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA-----SKE 569 (608)
Q Consensus 538 ---~----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-----~~~ 569 (608)
. .....+++|+|+++|. .|...+.-. +.+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~---~D~~~~~~~~~~~~~~~ 233 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSG---NDLTAQEFADSVLGEPA 233 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcC---cchhHHHHHHHhccChh
Confidence 0 0112568999999999 898764221 145
Q ss_pred HHHHhccCCcEEEEe-CCCCcCCCChh---hHHHHHHHHHH
Q 007311 570 LAKAFEEGCSVIIEH-DCGHIIPTRSP---YIDEIKSFLQR 606 (608)
Q Consensus 570 l~~~~~~~~~~vv~~-~gGH~ip~~~~---~~~~i~~Fl~~ 606 (608)
+.+.+....++++.+ ++||.+..... ..+.|.+||.+
T Consensus 234 ~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 234 WRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 556554333666666 57998744322 56777888753
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.9e-08 Score=109.28 Aligned_cols=77 Identities=26% Similarity=0.375 Sum_probs=59.7
Q ss_pred CCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCc
Q 007311 156 DKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFEN 235 (608)
Q Consensus 156 ~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~n 235 (608)
.++.++||||++.||+.|||+|+.+.+++.+. .++...+. +.+++++|++||.+|.||..|+.+|++. ||+|
T Consensus 405 ~~~~~lIDVR~~~E~~~~hI~g~~~~a~niP~---~~l~~~~~---~l~~~~~iivyC~~G~rS~~aa~~L~~~--G~~n 476 (482)
T PRK01269 405 PPDDVIIDIRSPDEQEDKPLKLEGVEVKSLPF---YKLSTQFG---DLDQSKTYLLYCDRGVMSRLQALYLREQ--GFSN 476 (482)
T ss_pred CCCCEEEECCCHHHHhcCCCCCCCceEEECCH---HHHHHHHh---hcCCCCeEEEECCCCHHHHHHHHHHHHc--CCcc
Confidence 45789999999999999999984333444442 23333322 2468899999999999999999999987 9999
Q ss_pred EEEcC
Q 007311 236 VFQLY 240 (608)
Q Consensus 236 V~~L~ 240 (608)
|+...
T Consensus 477 v~~y~ 481 (482)
T PRK01269 477 VKVYR 481 (482)
T ss_pred EEecC
Confidence 98765
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.1e-07 Score=86.81 Aligned_cols=120 Identities=22% Similarity=0.295 Sum_probs=80.1
Q ss_pred CCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----
Q 007311 464 PFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----- 538 (608)
Q Consensus 464 ~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----- 538 (608)
.|++-.|-...+++...++++.. .....++|+|||-||-+++.+|..++. ++-+|-|||......-
T Consensus 79 sf~~Gn~~~eadDL~sV~q~~s~---~nr~v~vi~gHSkGg~Vvl~ya~K~~d------~~~viNcsGRydl~~~I~eRl 149 (269)
T KOG4667|consen 79 SFYYGNYNTEADDLHSVIQYFSN---SNRVVPVILGHSKGGDVVLLYASKYHD------IRNVINCSGRYDLKNGINERL 149 (269)
T ss_pred ccccCcccchHHHHHHHHHHhcc---CceEEEEEEeecCccHHHHHHHHhhcC------chheEEcccccchhcchhhhh
Confidence 34444443333444444444433 123455799999999999999997753 4446666665533210
Q ss_pred -----------------------------------------c--ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 539 -----------------------------------------F--EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 539 -----------------------------------------~--~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
. ..-...||||-+||. .|.+||.+.+.++++.++
T Consensus 150 g~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs---~D~IVPve~AkefAk~i~ 226 (269)
T KOG4667|consen 150 GEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGS---EDEIVPVEDAKEFAKIIP 226 (269)
T ss_pred cccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEecc---CCceeechhHHHHHHhcc
Confidence 1 123457999999999 899999999999999999
Q ss_pred cCCcEEEEeCCCCcCCCChhh
Q 007311 576 EGCSVIIEHDCGHIIPTRSPY 596 (608)
Q Consensus 576 ~~~~~vv~~~gGH~ip~~~~~ 596 (608)
+. ..-+..++.|.+-..+..
T Consensus 227 nH-~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 227 NH-KLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred CC-ceEEecCCCcCccchhhh
Confidence 84 555566778987654443
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.1e-07 Score=98.07 Aligned_cols=61 Identities=26% Similarity=0.268 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC-----hhhHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR-----SPYIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~-----~~~~~~i~~Fl~~ 606 (608)
.+++|+|+++|+ +|.++|.+.++++.+.+.....+++.+++||.-+.. .+...+|.+||.+
T Consensus 284 ~i~~Pvliv~G~---~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAE---RDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecC---CCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 578999999999 899999999999999987655677777899985332 2356888888875
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.4e-08 Score=94.38 Aligned_cols=172 Identities=20% Similarity=0.238 Sum_probs=112.0
Q ss_pred cEEEEecCCCC-ChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 373 LRILCLHGFRQ-NASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 373 ~~iLlLHG~G~-na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+.||++.|.-+ ...+|-.|+.+|-+.|+ +.+|..|.| |.-+ .| +.+.
T Consensus 43 ~~iLlipGalGs~~tDf~pql~~l~k~l~--~TivawDPpGYG~S----------------rP----P~Rk--------- 91 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLLSLFKPLQ--VTIVAWDPPGYGTS----------------RP----PERK--------- 91 (277)
T ss_pred ceeEecccccccccccCCHHHHhcCCCCc--eEEEEECCCCCCCC----------------CC----Cccc---------
Confidence 46899999754 45789988888877665 789999977 1000 00 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
|. .+-+.+-.++-..+++.. .+...|+|+|-||..|+.+|++ ++..+..+|++
T Consensus 92 --------------f~-------~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak-----~~e~v~rmiiw 145 (277)
T KOG2984|consen 92 --------------FE-------VQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAK-----GKEKVNRMIIW 145 (277)
T ss_pred --------------ch-------HHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeecc-----Chhhhhhheee
Confidence 10 111222223333334332 2444899999999999999984 45566666666
Q ss_pred cCCCCCccc-------------------------------------------------------cccCCCCCCEEEEEcC
Q 007311 530 SGFALHSAE-------------------------------------------------------FEHRSINCPSLHIFGG 554 (608)
Q Consensus 530 sG~~~~~~~-------------------------------------------------------~~~~~i~~PvL~i~G~ 554 (608)
++..-...+ ....+++||+|++||.
T Consensus 146 ga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~ 225 (277)
T KOG2984|consen 146 GAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGG 225 (277)
T ss_pred cccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCC
Confidence 655432211 2467899999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC--hhhHHHHHHHHHH
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR--SPYIDEIKSFLQR 606 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~--~~~~~~i~~Fl~~ 606 (608)
.|+.++....--+....+. +++.+|. |+|-+..+ .++...+.+||++
T Consensus 226 ---kDp~~~~~hv~fi~~~~~~--a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 226 ---KDPFCGDPHVCFIPVLKSL--AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred ---cCCCCCCCCccchhhhccc--ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 8999998877777777665 6666664 68976554 3467788888864
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-06 Score=90.75 Aligned_cols=61 Identities=26% Similarity=0.434 Sum_probs=52.0
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl~~~ 607 (608)
.....|||.++|. ++..|+.+.-.++...|+. +++.+.+ +||++..+.| .++.|.+|+.+.
T Consensus 250 ~~~~~pvlfi~g~---~S~fv~~~~~~~~~~~fp~--~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 250 GPYTGPVLFIKGL---QSKFVPDEHYPRMEKIFPN--VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cccccceeEEecC---CCCCcChhHHHHHHHhccc--hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 4567899999999 8999999999999999988 7777777 9999988755 688888888653
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.6e-06 Score=89.87 Aligned_cols=178 Identities=16% Similarity=0.053 Sum_probs=112.9
Q ss_pred ccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 372 KLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 372 ~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.||++||-| ++.+.|...+..|++. .++.++.+|.+ +. + ... ++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~--~g~~Vv~vdYr--la----p--------------------e~~-~p-- 129 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASY--SGCTVIGIDYT--LS----P--------------------EAR-FP-- 129 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHH--cCCEEEEecCC--CC----C--------------------CCC-CC--
Confidence 46899999966 6666776445555543 26889999865 21 0 000 01
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhC-CCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKG-EIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~-~~~l~ 524 (608)
...++..++++++.+..++.+ ...+|+|+|+||.+|+.++.+..+... ...++
T Consensus 130 -----------------------~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~ 186 (318)
T PRK10162 130 -----------------------QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVA 186 (318)
T ss_pred -----------------------CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChh
Confidence 123456667778776655543 356899999999999999986543211 25688
Q ss_pred EEEEecCCCCCccc-------------------------------ccc-------C---CCCCCEEEEEcCCCCCCcccc
Q 007311 525 FAILCSGFALHSAE-------------------------------FEH-------R---SINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 525 ~vIlisG~~~~~~~-------------------------------~~~-------~---~i~~PvL~i~G~~~~~D~~Vp 563 (608)
++|+++++...... ... . ..-.|+++++|+ .|+..+
T Consensus 187 ~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~---~D~L~d 263 (318)
T PRK10162 187 GVLLWYGLYGLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAE---FDPLLD 263 (318)
T ss_pred heEEECCccCCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecC---CCcCcC
Confidence 89998876432100 000 0 112599999999 898864
Q ss_pred hHHHHHHHHHhccC--CcEEEEeCC-CCcCCCC-------hhhHHHHHHHHHHhC
Q 007311 564 NQASKELAKAFEEG--CSVIIEHDC-GHIIPTR-------SPYIDEIKSFLQRFL 608 (608)
Q Consensus 564 ~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~-------~~~~~~i~~Fl~~~L 608 (608)
.++.+++.+... .++++++++ .|.+... ...++.+.+||++.|
T Consensus 264 --e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 264 --DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred --hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 678888888754 356667766 7975322 234677778887653
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=98.59 E-value=2e-07 Score=101.02 Aligned_cols=62 Identities=16% Similarity=0.287 Sum_probs=45.9
Q ss_pred CCC--CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCc--C-CCC--hhhHHHHHHHHHHh
Q 007311 542 RSI--NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHI--I-PTR--SPYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i--~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~--i-p~~--~~~~~~i~~Fl~~~ 607 (608)
.++ ++|+++++|+ +|..++++.++++.+.+... ..++.. +.||. + ..+ +...+.|.+||++.
T Consensus 320 ~~i~~~~Pv~i~~G~---~D~lv~~~dv~~l~~~Lp~~-~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 320 SLIPKSLPLWMGYGG---TDGLADVTDVEHTLAELPSK-PELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred ccCCCCccEEEEEcC---CCCCCCHHHHHHHHHHCCCc-cEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 355 5799999999 89999999999999988764 344444 45995 3 222 23578999999764
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.1e-06 Score=106.47 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=49.0
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC-----ChhhHHHHHHHHHHh
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT-----RSPYIDEIKSFLQRF 607 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~-----~~~~~~~i~~Fl~~~ 607 (608)
...|++|+|+|+|+ +|+++|++.++.+.+.+.+.....+..++||.-.. .++....|.+||+++
T Consensus 293 L~~i~~P~L~i~G~---~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 293 LADITCPVLAFVGE---VDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hhhCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 35788999999999 89999999999999998764333566788998321 124567888998753
|
|
| >KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-07 Score=97.20 Aligned_cols=112 Identities=14% Similarity=0.264 Sum_probs=77.7
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhh--hcC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAE--QLQ 205 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~--~~k 205 (608)
.-++|||++++.+|+... .+.....+|||+|-+|||.-|||+| ++|......-... .+.+... ..+
T Consensus 154 ~~k~Is~etl~~ll~~~~-------~~~~~~~~iiDcR~pyEY~GGHIkg----avnl~~~~~~~~~-f~~~~~~~~~~~ 221 (325)
T KOG3772|consen 154 DLKYISPETLKGLLQGKF-------SDFFDKFIIIDCRYPYEYEGGHIKG----AVNLYSKELLQDF-FLLKDGVPSGSK 221 (325)
T ss_pred cccccCHHHHHHHHHhcc-------ccceeeEEEEEeCCcccccCccccc----ceecccHhhhhhh-hccccccccccC
Confidence 357999999999998641 1122337899999999999999999 5555322211100 0111111 124
Q ss_pred CCeEEEEcC-CCccHHHHHHHHHhc----------CCCCCcEEEcCccHHHHHHhCC
Q 007311 206 GKHVLMYCT-GGIRCEMASAYVRSK----------GAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 206 ~k~Iv~yCt-gGiR~~~a~~~L~~~----------~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
...+|+||+ +-.|.-++|.+|++- -.-|.++|.|+||+.+|...++
T Consensus 222 ~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~~~ 278 (325)
T KOG3772|consen 222 RVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSNYP 278 (325)
T ss_pred ceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHhcc
Confidence 567899997 568999999999951 1246789999999999998876
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.1e-07 Score=86.79 Aligned_cols=179 Identities=17% Similarity=0.109 Sum_probs=118.9
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+|++|.||+..+|--.+..-...+-.+|+ ..+..++.. .+..+..
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~--mnv~ivsYR-------------------------------GYG~S~G 122 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLK--MNVLIVSYR-------------------------------GYGKSEG 122 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcC--ceEEEEEee-------------------------------ccccCCC
Confidence 4678999999999998877755555556654 455555433 1111000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
+-.. ....-+-+.++++|...-.-.....+++|-|.||++|..+|... ..++.++|+-
T Consensus 123 --------------spsE---~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~-----~~ri~~~ivE 180 (300)
T KOG4391|consen 123 --------------SPSE---EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN-----SDRISAIIVE 180 (300)
T ss_pred --------------Cccc---cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccc-----hhheeeeeee
Confidence 0000 00112345566666544333334457999999999999999854 4467788886
Q ss_pred cCCCCCccc-------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe
Q 007311 530 SGFALHSAE-------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH 584 (608)
Q Consensus 530 sG~~~~~~~-------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~ 584 (608)
..|...... ....+.++|+|.+-|. +|.+||+-+.++|++.+......+.++
T Consensus 181 NTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGl---kDelVPP~~Mr~Ly~~c~S~~Krl~eF 257 (300)
T KOG4391|consen 181 NTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGL---KDELVPPVMMRQLYELCPSRTKRLAEF 257 (300)
T ss_pred chhccchhhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEeecC---ccccCCcHHHHHHHHhCchhhhhheeC
Confidence 666543110 2345778999999999 899999999999999999776778888
Q ss_pred CCC-CcC-CCChhhHHHHHHHHHH
Q 007311 585 DCG-HII-PTRSPYIDEIKSFLQR 606 (608)
Q Consensus 585 ~gG-H~i-p~~~~~~~~i~~Fl~~ 606 (608)
+.| |-- -.-..|.+.|.+||.+
T Consensus 258 P~gtHNDT~i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 258 PDGTHNDTWICDGYFQAIEDFLAE 281 (300)
T ss_pred CCCccCceEEeccHHHHHHHHHHH
Confidence 764 531 0113699999999976
|
|
| >COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.8e-07 Score=92.92 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=76.5
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc----------cccCCCCccccCcccccCC------Cc
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI----------GKFRTPSVETLDPEIRQFS------DL 193 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~----------Gh~~g~~~~~l~~~~~~~~------~~ 193 (608)
...+..++...++. +..+|||+|++.||.- ||||| ++|.+-..+. ..
T Consensus 156 ~~~~~~~~~~~~~~-------------~~~~liDaR~~~rf~G~~~ep~~~~~GHIPG----AiNipw~~~~~~~~~~~~ 218 (285)
T COG2897 156 AVVDATLVADALEV-------------PAVLLIDARSPERFRGKEPEPRDGKAGHIPG----AINIPWTDLVDDGGLFKS 218 (285)
T ss_pred ccCCHHHHHHHhcC-------------CCeEEEecCCHHHhCCCCCCCCCCCCCCCCC----CcCcCHHHHhcCCCccCc
Confidence 45567777777765 5788999999999998 99999 4554422221 12
Q ss_pred hHHHHh---hhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 194 PTWIDN---NAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 194 ~~~~~~---~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
++.+.. .....++|+||+||.+|.|+....-.|+.. |+.++....|+...|....
T Consensus 219 ~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~l--g~~~~~lYdGSWsEWg~~~ 276 (285)
T COG2897 219 PEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAEL--GGPNNRLYDGSWSEWGSDP 276 (285)
T ss_pred HHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHh--CCCCcccccChHHHhhcCC
Confidence 223322 233578999999999999999998889887 7777888999999998753
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=3e-06 Score=87.47 Aligned_cols=65 Identities=20% Similarity=0.318 Sum_probs=44.1
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCc--CCCC--hh---hHHHHHHHHHHhC
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHI--IPTR--SP---YIDEIKSFLQRFL 608 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~--ip~~--~~---~~~~i~~Fl~~~L 608 (608)
....|++|+|+||.. +|++++.+............ +.+... -|||. +-.. .+ -.+.+.+||..++
T Consensus 269 ~L~~Ir~PtLii~A~---DDP~~~~~~iP~~~~~~np~-v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 269 LLPKIRKPTLIINAK---DDPFMPPEVIPKLQEMLNPN-VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred cccccccceEEEecC---CCCCCChhhCCcchhcCCCc-eEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 356899999999999 99999987777666643333 555544 57996 2211 12 2467888887653
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.4e-06 Score=92.21 Aligned_cols=47 Identities=17% Similarity=0.161 Sum_probs=39.0
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCC
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIP 591 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip 591 (608)
...|++|+|+++|+ +|.++|.+.+..+.+.+... ..++..++||...
T Consensus 411 L~~I~vPvLvV~G~---~D~IvP~~sa~~l~~~i~~~-~~~vL~~sGHi~~ 457 (532)
T TIGR01838 411 LSKVKVPVYIIATR---EDHIAPWQSAYRGAALLGGP-KTFVLGESGHIAG 457 (532)
T ss_pred hhhCCCCEEEEeeC---CCCcCCHHHHHHHHHHCCCC-EEEEECCCCCchH
Confidence 45789999999999 89999999999999998853 5555567899854
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=86.07 Aligned_cols=183 Identities=17% Similarity=0.223 Sum_probs=109.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+|++|+|||.-++.+. .-+..|.... ..++++|.++..= + . .....+| +-|.
T Consensus 123 ~~~P~vvilpGltg~S~~--~YVr~lv~~a~~~G~r~VVfN~RG-~-------~----g~~LtTp---------r~f~-- 177 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHE--SYVRHLVHEAQRKGYRVVVFNHRG-L-------G----GSKLTTP---------RLFT-- 177 (409)
T ss_pred CCCcEEEEecCCCCCChh--HHHHHHHHHHHhCCcEEEEECCCC-C-------C----CCccCCC---------ceee--
Confidence 456899999999777754 2333554444 4689999988661 0 0 0000000 1111
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
..-++++.++++++++..-+. ....+||||||+|.+.+..+-.. ..+-.+++.+
T Consensus 178 ----------------------ag~t~Dl~~~v~~i~~~~P~a--~l~avG~S~Gg~iL~nYLGE~g~--~~~l~~a~~v 231 (409)
T KOG1838|consen 178 ----------------------AGWTEDLREVVNHIKKRYPQA--PLFAVGFSMGGNILTNYLGEEGD--NTPLIAAVAV 231 (409)
T ss_pred ----------------------cCCHHHHHHHHHHHHHhCCCC--ceEEEEecchHHHHHHHhhhccC--CCCceeEEEE
Confidence 012567777777776553222 23688999999999998875431 1223455555
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++|-.....
T Consensus 232 ~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~ 311 (409)
T KOG1838|consen 232 CNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKK 311 (409)
T ss_pred eccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhh
Confidence 6676543110
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-CcEEEEeCCCCc------CCCChhhHHH-HHHHHHH
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-CSVIIEHDCGHI------IPTRSPYIDE-IKSFLQR 606 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-~~~vv~~~gGH~------ip~~~~~~~~-i~~Fl~~ 606 (608)
.....|++|+|.|... +|+++|.... -..+...+. ...++...|||. .|...-.+++ +++|+..
T Consensus 312 aSs~~~v~~I~VP~L~ina~---DDPv~p~~~i-p~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 312 ASSSNYVDKIKVPLLCINAA---DDPVVPEEAI-PIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cchhhhcccccccEEEEecC---CCCCCCcccC-CHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 2356899999999999 8999986422 222333332 244555668996 3333346777 8899876
Q ss_pred h
Q 007311 607 F 607 (608)
Q Consensus 607 ~ 607 (608)
+
T Consensus 388 ~ 388 (409)
T KOG1838|consen 388 A 388 (409)
T ss_pred H
Confidence 5
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.2e-06 Score=86.77 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=64.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++||++||+|.+...+......+++.|. .++.++.+|.|- .. +..
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G--------~G-----------------------~S~-- 71 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYG--------CG-----------------------DSA-- 71 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCC--------CC-----------------------CCC--
Confidence 57899999999864433322335666665 579999999881 10 000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+.+....+....+++..++++|.+. ......|+||||||.+|+.++.+. +..++++|+++
T Consensus 72 ------------g~~~~~~~~~~~~Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~-----p~~v~~lVL~~ 131 (266)
T TIGR03101 72 ------------GDFAAARWDVWKEDVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAANPL-----AAKCNRLVLWQ 131 (266)
T ss_pred ------------CccccCCHHHHHHHHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHHHhC-----ccccceEEEec
Confidence 0000000001122333344444321 123458999999999999998743 45688899988
Q ss_pred CCCC
Q 007311 531 GFAL 534 (608)
Q Consensus 531 G~~~ 534 (608)
+...
T Consensus 132 P~~~ 135 (266)
T TIGR03101 132 PVVS 135 (266)
T ss_pred cccc
Confidence 7554
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=82.03 Aligned_cols=130 Identities=15% Similarity=0.085 Sum_probs=84.5
Q ss_pred ccHHHHHHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------
Q 007311 475 DGLDVSLAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------- 538 (608)
.++..-..||..+|... ....-++||||||..++.++........-+.+..+|.|+|.......
T Consensus 80 ~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~ 159 (255)
T PF06028_consen 80 ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLN 159 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhc
Confidence 45666677777776653 24446999999999999888865432223578999999876532210
Q ss_pred ----------------c--ccCCCCCCEEEEEcC---CCCCCcccchHHHHHHHHHhccCCc---EEEEeC--CCCc-CC
Q 007311 539 ----------------F--EHRSINCPSLHIFGG---DLGNDRQVANQASKELAKAFEEGCS---VIIEHD--CGHI-IP 591 (608)
Q Consensus 539 ----------------~--~~~~i~~PvL~i~G~---~~~~D~~Vp~~~~~~l~~~~~~~~~---~vv~~~--gGH~-ip 591 (608)
. ..-.-.+.+|-|+|. .+..|..||...+..++-++..... +.++.+ +.|. .+
T Consensus 160 ~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lh 239 (255)
T PF06028_consen 160 KNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLH 239 (255)
T ss_dssp TT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGG
T ss_pred ccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCC
Confidence 0 122345779999996 2346999999999999999986322 222222 3675 56
Q ss_pred CChhhHHHHHHHH
Q 007311 592 TRSPYIDEIKSFL 604 (608)
Q Consensus 592 ~~~~~~~~i~~Fl 604 (608)
..+...+.|.+||
T Consensus 240 eN~~V~~~I~~FL 252 (255)
T PF06028_consen 240 ENPQVDKLIIQFL 252 (255)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 6566777788877
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-05 Score=76.30 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhH--h-C--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------
Q 007311 479 VSLAYLKTIFSQ--E-G--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------- 538 (608)
Q Consensus 479 ~s~~~L~~~i~~--~-~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------- 538 (608)
++++.|.+.+.+ . . ....|+|-|+||.-|.+++.++. ++ +|++++...+...
T Consensus 41 ~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g-------~~-aVLiNPAv~P~~~L~~~ig~~~~y~~~~ 112 (180)
T PRK04940 41 HDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG-------IR-QVIFNPNLFPEENMEGKIDRPEEYADIA 112 (180)
T ss_pred HHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC-------CC-EEEECCCCChHHHHHHHhCCCcchhhhh
Confidence 345555555543 1 1 23589999999999999999653 43 4555554433211
Q ss_pred ----cccCCCCCC--EEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 539 ----FEHRSINCP--SLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 539 ----~~~~~i~~P--vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.+. +++-| .+++..+ .|.+++...+.+ .+...-..++..+|.|.+...++++..|.+|+.
T Consensus 113 ~~h~~eL-~~~~p~r~~vllq~---gDEvLDyr~a~~---~y~~~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 113 TKCVTNF-REKNRDRCLVILSR---NDEVLDSQRTAE---ELHPYYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred HHHHHHh-hhcCcccEEEEEeC---CCcccCHHHHHH---HhccCceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 011 13445 4888998 799998665554 334321233444567989888889999999985
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.1e-05 Score=72.39 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=81.5
Q ss_pred HHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------cccCCCCCCEEEE
Q 007311 483 YLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-----------FEHRSINCPSLHI 551 (608)
Q Consensus 483 ~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-----------~~~~~i~~PvL~i 551 (608)
.|.+.+.......+|++||.|+.+++.++.+.+ .+++|+++++++-.-... ....++.-|++++
T Consensus 49 ~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~-----~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vv 123 (181)
T COG3545 49 RLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQ-----RQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVV 123 (181)
T ss_pred HHHHHHhccCCCeEEEEecccHHHHHHHHHhhh-----hccceEEEecCCCccccccchhhccccCCCccccCCCceeEE
Confidence 344444443222489999999999999998664 389999999988654321 1245677899999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC-----ChhhHHHHHHHHHH
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT-----RSPYIDEIKSFLQR 606 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~-----~~~~~~~i~~Fl~~ 606 (608)
+.. +|++++++.++++++.... ..+..-++||+--. -++-...+.+|+.+
T Consensus 124 aSr---nDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 124 ASR---NDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred Eec---CCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 999 9999999999999999886 55555667887322 23345555555543
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.26 E-value=4e-06 Score=82.13 Aligned_cols=106 Identities=25% Similarity=0.269 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC-----------C-----Ccc-c
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA-----------L-----HSA-E 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~-----------~-----~~~-~ 538 (608)
.....+.+..+++..+ ....++||||||++++.++.+. +..++.+|++++.. + ... .
T Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQY-----PERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLD 101 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHC-----chhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHH
Confidence 4444555555555544 3368999999999999999965 45799999999851 0 000 0
Q ss_pred -------------------------------------------------------------------cccCCCCCCEEEE
Q 007311 539 -------------------------------------------------------------------FEHRSINCPSLHI 551 (608)
Q Consensus 539 -------------------------------------------------------------------~~~~~i~~PvL~i 551 (608)
.....+++|+|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i 181 (230)
T PF00561_consen 102 NFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLII 181 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEE
T ss_pred hhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEE
Confidence 1235799999999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCC
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPT 592 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~ 592 (608)
+|+ +|.++|++.+..+.+.++. .+.+..++ ||....
T Consensus 182 ~~~---~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 182 WGE---DDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFL 218 (230)
T ss_dssp EET---TCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHH
T ss_pred EeC---CCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHh
Confidence 999 8999999999999999987 55555555 998644
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=2e-05 Score=98.04 Aligned_cols=171 Identities=15% Similarity=0.161 Sum_probs=116.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.++|+||+|+++..|. .+.+.|...+.++.++.|.. ....
T Consensus 1068 ~~~l~~lh~~~g~~~~~~----~l~~~l~~~~~v~~~~~~g~-----------------------------~~~~----- 1109 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS----VLSRYLDPQWSIYGIQSPRP-----------------------------DGPM----- 1109 (1296)
T ss_pred CCCeEEecCCCCchHHHH----HHHHhcCCCCcEEEEECCCC-----------------------------CCCC-----
Confidence 356999999999999999 88888888899999887711 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+++..+.+.+.+.... ....++|||+||.+|..+|.+.+. ....+..++++
T Consensus 1110 --------------------~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~--~~~~v~~l~l~ 1167 (1296)
T PRK10252 1110 --------------------QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRA--RGEEVAFLGLL 1167 (1296)
T ss_pred --------------------CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHH--cCCceeEEEEe
Confidence 012346666666666666532 124799999999999999987652 24567788887
Q ss_pred cCCCCCc------------c----------c-------------------------------cccCCCCCCEEEEEcCCC
Q 007311 530 SGFALHS------------A----------E-------------------------------FEHRSINCPSLHIFGGDL 556 (608)
Q Consensus 530 sG~~~~~------------~----------~-------------------------------~~~~~i~~PvL~i~G~~~ 556 (608)
.++.+.. . . .....+..|++++.|.
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1245 (1296)
T PRK10252 1168 DTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAE-- 1245 (1296)
T ss_pred cCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcC--
Confidence 7654311 0 0 0123566899999998
Q ss_pred CCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHh
Q 007311 557 GNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 557 ~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
.|..........+.+.. . ...+...++||.....++.+..+.+.|.+.
T Consensus 1246 -~~~~~~~~~~~~W~~~~-~-~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~ 1293 (1296)
T PRK10252 1246 -RTLQEGMSPEQAWSPWI-A-ELDVYRQDCAHVDIISPEAFEKIGPILRAT 1293 (1296)
T ss_pred -CCCcccCCcccchhhhc-C-CCEEEECCCCHHHHCCcHHHHHHHHHHHHH
Confidence 56544444445566665 3 367777899998766666778888777654
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-05 Score=80.91 Aligned_cols=105 Identities=21% Similarity=0.158 Sum_probs=63.0
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccC--CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKN--IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~--~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
++..|.++++||.|.++-.|. .+++.|.. ..+++.+|+. ++. . .=+.
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA----~~a~el~s~~~~r~~a~DlR--------gHG-e------------------Tk~~ 119 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFA----IFASELKSKIRCRCLALDLR--------GHG-E------------------TKVE 119 (343)
T ss_pred CCCccEEEEeecCcccchhHH----HHHHHHHhhcceeEEEeecc--------ccC-c------------------cccC
Confidence 345678999999999999999 55555543 4567778876 211 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
..+ .++ ...-..+....+.+...+..+.+.|+||||||++|...|.... -+.+.|+
T Consensus 120 -------------~e~-dlS------~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~----lpsl~Gl 175 (343)
T KOG2564|consen 120 -------------NED-DLS------LETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKT----LPSLAGL 175 (343)
T ss_pred -------------Chh-hcC------HHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhh----chhhhce
Confidence 000 011 1112233344455555556677789999999999988887533 2235555
Q ss_pred EE
Q 007311 527 IL 528 (608)
Q Consensus 527 Il 528 (608)
+.
T Consensus 176 ~v 177 (343)
T KOG2564|consen 176 VV 177 (343)
T ss_pred EE
Confidence 55
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.9e-05 Score=84.86 Aligned_cols=172 Identities=17% Similarity=0.169 Sum_probs=97.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHH-HHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASL-AKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L-~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|+||+.-|.-+-.+++. .+ .+.| +.++.++.+|.|-. + ...+|..
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~----~l~~~~l~~rGiA~LtvDmPG~-----------G--------------~s~~~~l- 237 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLY----RLFRDYLAPRGIAMLTVDMPGQ-----------G--------------ESPKWPL- 237 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGH----HHHHCCCHHCT-EEEEE--TTS-----------G--------------GGTTT-S-
T ss_pred CCCCEEEEeCCcchhHHHHH----HHHHHHHHhCCCEEEEEccCCC-----------c--------------ccccCCC-
Confidence 55689999999999998876 43 3344 36899999999910 0 0012311
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCC----ceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGP----FDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~----~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
+++.+...+.+.+.+..... .++++|+|+||.+|..+|... +.++
T Consensus 238 --------------------------~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----~~Rl 286 (411)
T PF06500_consen 238 --------------------------TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----DPRL 286 (411)
T ss_dssp ---------------------------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----TTT-
T ss_pred --------------------------CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----ccce
Confidence 01112344445555555443 346899999999999999743 5689
Q ss_pred cEEEEecCCCCCcc-c---------------------------------------c--c--cCCCCCCEEEEEcCCCCCC
Q 007311 524 RFAILCSGFALHSA-E---------------------------------------F--E--HRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 524 ~~vIlisG~~~~~~-~---------------------------------------~--~--~~~i~~PvL~i~G~~~~~D 559 (608)
+++|.+++...... + . - ..+.++|+|.+.|+ +|
T Consensus 287 kavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~---~D 363 (411)
T PF06500_consen 287 KAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGE---DD 363 (411)
T ss_dssp SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEET---T-
T ss_pred eeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecC---CC
Confidence 99999988643321 0 0 1 25678999999999 89
Q ss_pred cccchHHHHHHHHHhccCCcEEEEeCCC-CcCCCChhhHHHHHHHHHHhC
Q 007311 560 RQVANQASKELAKAFEEGCSVIIEHDCG-HIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~~~~vv~~~gG-H~ip~~~~~~~~i~~Fl~~~L 608 (608)
++.|.+..+-++..-.++ .......+. |.- -+.-+..+.+||++.|
T Consensus 364 ~v~P~eD~~lia~~s~~g-k~~~~~~~~~~~g--y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 364 PVSPIEDSRLIAESSTDG-KALRIPSKPLHMG--YPQALDEIYKWLEDKL 410 (411)
T ss_dssp SSS-HHHHHHHHHTBTT--EEEEE-SSSHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCC-ceeecCCCccccc--hHHHHHHHHHHHHHhc
Confidence 999988877766554432 333333333 431 1235788899998754
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.2e-05 Score=80.51 Aligned_cols=118 Identities=17% Similarity=0.063 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
.-.+++.|..+-..+..++++-|.||||++|+..+.+-+ +++.+++.-+++.....
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~------rik~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k 233 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP------RIKAVVADYPFLSDFPRAIELATEGPYDEIQTYFK 233 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh------hhhcccccccccccchhheeecccCcHHHHHHHHH
Confidence 333333333333334456689999999999999888643 34445444444322110
Q ss_pred -------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCc-CCCChhhH
Q 007311 539 -------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHI-IPTRSPYI 597 (608)
Q Consensus 539 -------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~-ip~~~~~~ 597 (608)
....+++.|+|+..|- -|+++|+...-..++.+... .++.++. -+|+ +|. -..
T Consensus 234 ~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL---~D~vcpPstqFA~yN~l~~~-K~i~iy~~~aHe~~p~--~~~ 307 (321)
T COG3458 234 RHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGL---MDPVCPPSTQFAAYNALTTS-KTIEIYPYFAHEGGPG--FQS 307 (321)
T ss_pred hcCchHHHHHHHHhhhhhhhHHHhhccceEEeecc---cCCCCCChhhHHHhhcccCC-ceEEEeeccccccCcc--hhH
Confidence 1246899999999999 99999999999999999865 4443332 2587 444 345
Q ss_pred HHHHHHHHH
Q 007311 598 DEIKSFLQR 606 (608)
Q Consensus 598 ~~i~~Fl~~ 606 (608)
++++.|++.
T Consensus 308 ~~~~~~l~~ 316 (321)
T COG3458 308 RQQVHFLKI 316 (321)
T ss_pred HHHHHHHHh
Confidence 668888865
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0001 Score=74.90 Aligned_cols=142 Identities=19% Similarity=0.242 Sum_probs=97.9
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
...-|+|-+||--+|..+|+ -++..|. .+.|+|-++.| ++..-+.
T Consensus 33 s~~gTVv~~hGsPGSH~DFk----Yi~~~l~~~~iR~I~iN~P-----------------------------Gf~~t~~- 78 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDFK----YIRPPLDEAGIRFIGINYP-----------------------------GFGFTPG- 78 (297)
T ss_pred CCceeEEEecCCCCCccchh----hhhhHHHHcCeEEEEeCCC-----------------------------CCCCCCC-
Confidence 33458999999999999999 6666665 48999999988 1111110
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
+..+...-.+-..++.+++++.+ ..+.++|||.|+-.|+.++..+ +..++
T Consensus 79 ---------------------~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~-------~~~g~ 130 (297)
T PF06342_consen 79 ---------------------YPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTH-------PLHGL 130 (297)
T ss_pred ---------------------CcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcC-------ccceE
Confidence 00112233456677778887754 4557899999999999999843 46688
Q ss_pred EEecCCC--CCccc-------------------------------------------------------------cccCC
Q 007311 527 ILCSGFA--LHSAE-------------------------------------------------------------FEHRS 543 (608)
Q Consensus 527 IlisG~~--~~~~~-------------------------------------------------------------~~~~~ 543 (608)
+++++.. +.... .....
T Consensus 131 ~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~ 210 (297)
T PF06342_consen 131 VLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNK 210 (297)
T ss_pred EEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhcc
Confidence 8887553 22110 12234
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
-++|+|+++|. +|..|-.+.+.+.+..+..
T Consensus 211 ~~ikvli~ygg---~DhLIEeeI~~E~a~~f~~ 240 (297)
T PF06342_consen 211 KPIKVLIAYGG---KDHLIEEEISFEFAMKFKG 240 (297)
T ss_pred CCCcEEEEEcC---cchhhHHHHHHHHHHHhCC
Confidence 45999999999 8999888877777666653
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00013 Score=70.92 Aligned_cols=51 Identities=25% Similarity=0.462 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP 595 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~ 595 (608)
..+.+|+++++|. +|.+.|........+........++..++||......+
T Consensus 218 ~~~~~P~l~i~g~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 268 (282)
T COG0596 218 ARITVPTLIIHGE---DDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAP 268 (282)
T ss_pred ccCCCCeEEEecC---CCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcH
Confidence 3567999999999 78777766555555555532234455567999877543
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.7e-06 Score=83.64 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=69.6
Q ss_pred cHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEE
Q 007311 476 GLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHI 551 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i 551 (608)
.+.+.++.+.+++... ..+..++|+|+||..++.++.++ +.-|.+++.++|...... .....-++|+-++
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf-----PdfFAaa~~iaG~~d~v~-lv~~lk~~piWvf 321 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF-----PDFFAAAVPIAGGGDRVY-LVRTLKKAPIWVF 321 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC-----chhhheeeeecCCCchhh-hhhhhccCceEEE
Confidence 3556666666666654 34556999999999999999855 556899999998765221 1234557899999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhcc
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
|+. +|.++|.+.++-++..++.
T Consensus 322 hs~---dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 322 HSS---DDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred Eec---CCCccccCcceeehHHHHh
Confidence 999 8999999999988887775
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.5e-05 Score=84.17 Aligned_cols=39 Identities=15% Similarity=-0.022 Sum_probs=31.9
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
....|+|||+||.+|..++... +..++.++++.+..|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~-----p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLT-----KHKVNRITGLDPAGPTF 157 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhC-----CcceeEEEEEcCCCCcc
Confidence 3457999999999999988743 46799999999887754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.8e-05 Score=76.05 Aligned_cols=162 Identities=15% Similarity=0.136 Sum_probs=99.9
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
...-|.+||+||++-.++.+. .+.+++. .++-+|.+|--. +. + .
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys----~ll~hvAShGyIVV~~d~~~-~~----------------------------~-~- 58 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYS----QLLEHVASHGYIVVAPDLYS-IG----------------------------G-P- 58 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHH----HHHHHHHhCceEEEEecccc-cC----------------------------C-C-
Confidence 344689999999997777777 5555555 477777776220 00 0 0
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--------CceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--------PFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--------~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
.-......+.+.++||.+-+...- ...+|.|||+||-+|+.+++.+.....
T Consensus 59 ---------------------~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~ 117 (259)
T PF12740_consen 59 ---------------------DDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL 117 (259)
T ss_pred ---------------------CcchhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhccccc
Confidence 001123456667777666554431 234699999999999999986632222
Q ss_pred CCCccEEEEecCCC---------CCcccc--ccCCCCCCEEEEEcCCCCCCc---------ccch-HHHHHHHHHhccCC
Q 007311 520 EIDFRFAILCSGFA---------LHSAEF--EHRSINCPSLHIFGGDLGNDR---------QVAN-QASKELAKAFEEGC 578 (608)
Q Consensus 520 ~~~l~~vIlisG~~---------~~~~~~--~~~~i~~PvL~i~G~~~~~D~---------~Vp~-~~~~~l~~~~~~~~ 578 (608)
...++++|++.+.- |..... ......+|+++| |+. .+. -+|. ...++.++.+....
T Consensus 118 ~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~~~P~lvi-GtG--Lg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~ 194 (259)
T PF12740_consen 118 DLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDFSMPALVI-GTG--LGGEPRNPLFPPCAPAGVNYREFFDECKPPS 194 (259)
T ss_pred ccceeEEEEeccccccccccCCCCccccCcccccCCCCCeEEE-ecc--cCcccccccCCCCCCCCCCHHHHHHhcCCCE
Confidence 45789999987665 111111 223355999777 543 332 2332 34566777777765
Q ss_pred cEEEEeCCCCc
Q 007311 579 SVIIEHDCGHI 589 (608)
Q Consensus 579 ~~vv~~~gGH~ 589 (608)
..++.-+.||.
T Consensus 195 ~~~v~~~~GH~ 205 (259)
T PF12740_consen 195 WHFVAKDYGHM 205 (259)
T ss_pred EEEEeCCCCch
Confidence 66777778997
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.7e-05 Score=80.75 Aligned_cols=118 Identities=17% Similarity=0.135 Sum_probs=69.8
Q ss_pred CccEEEEecCCCCChHHHHHHH--HHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFRQNASSFKGRT--ASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~--~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.++.+|.|||-+||+......+ ..|++. ..+-|+|||.- ..+. ......|+..
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg~d~lAd~--~gFlV~yPdg~~~~wn----------------------~~~~~~~~~p 115 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTGWDALADR--EGFLVAYPDGYDRAWN----------------------ANGCGNWFGP 115 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccchhhhhcc--cCcEEECcCccccccC----------------------CCcccccCCc
Confidence 3478999999999998877554 344433 46778887532 1110 1123455441
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.+ +-+. ......+.+.++.|......+..++.|-|+|-||.||..+++. .+..|.++-
T Consensus 116 ~~-------~~~g----------~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~-----~p~~faa~A 173 (312)
T COG3509 116 AD-------RRRG----------VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACE-----YPDIFAAIA 173 (312)
T ss_pred cc-------ccCC----------ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhc-----Cccccccee
Confidence 11 0000 0112223444444333333344566799999999999999994 456678888
Q ss_pred EecCCCC
Q 007311 528 LCSGFAL 534 (608)
Q Consensus 528 lisG~~~ 534 (608)
.++|..+
T Consensus 174 ~VAg~~~ 180 (312)
T COG3509 174 PVAGLLA 180 (312)
T ss_pred eeecccC
Confidence 8888774
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.7e-05 Score=78.88 Aligned_cols=107 Identities=18% Similarity=0.273 Sum_probs=67.1
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----------c------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA----------E------ 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~----------~------ 538 (608)
+-+++++++|.+.-......++|+|.|.||-+|+.+|..+ ..++.+|+++|...... .
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~------~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~ 77 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF------PQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPF 77 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS------SSEEEEEEES--SB--SSEEEETTE--EE----B
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC------CCccEEEEeCCceeEecchhcccCCCccCCcCCc
Confidence 5588899998877665667779999999999999999964 26888888776542110 0
Q ss_pred -------------------------------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccC----CcEEE
Q 007311 539 -------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG----CSVII 582 (608)
Q Consensus 539 -------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~----~~~vv 582 (608)
-...++++|+|+|.|+ +|...|.. .++.+.+.++.. ..+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~---dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l 154 (213)
T PF08840_consen 78 DISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGE---DDQIWPSSEMAEQIEERLKAAGFPHNVEHL 154 (213)
T ss_dssp -GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEET---T-SSS-HHHHHHHHHHHHHCTT-----EEE
T ss_pred ChhhceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeC---CCCccchHHHHHHHHHHHHHhCCCCcceEE
Confidence 0134688999999999 89998864 444566666643 24455
Q ss_pred Ee-CCCCcC
Q 007311 583 EH-DCGHII 590 (608)
Q Consensus 583 ~~-~gGH~i 590 (608)
.+ ++||.+
T Consensus 155 ~Y~~aGH~i 163 (213)
T PF08840_consen 155 SYPGAGHLI 163 (213)
T ss_dssp EETTB-S--
T ss_pred EcCCCCcee
Confidence 44 569996
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.6e-05 Score=75.79 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=40.6
Q ss_pred cccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 472 QQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 472 ~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+.+.+.+.++.+.+.... ....+.|+||||||.+|-.++.... .....++.+|.++...
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~--~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN--YDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc--cccccEEEEEEEcCCC
Confidence 3455566777776666622 2344579999999999988876432 1235688999988654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.7e-05 Score=74.57 Aligned_cols=165 Identities=20% Similarity=0.250 Sum_probs=105.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+-.|++.-=||-..++-+ .++.++. .++.++.||-=..=| -.++.+....-.|+...+
T Consensus 40 ~~li~i~DvfG~~~~n~r----~~Adk~A~~Gy~v~vPD~~~Gdp----------------~~~~~~~~~~~~w~~~~~- 98 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTR----EGADKVALNGYTVLVPDFFRGDP----------------WSPSLQKSERPEWMKGHS- 98 (242)
T ss_pred eEEEEEEeeeccccHHHH----HHHHHHhcCCcEEEcchhhcCCC----------------CCCCCChhhhHHHHhcCC-
Confidence 334455555666665555 6677776 578888887331100 001112223445665221
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ ......+...+++|+ ..+ -..|+.||.+||.++..+.... ..+.++++
T Consensus 99 ----------------~---~~~~~~i~~v~k~lk----~~g~~kkIGv~GfCwGak~vv~~~~~~------~~f~a~v~ 149 (242)
T KOG3043|consen 99 ----------------P---PKIWKDITAVVKWLK----NHGDSKKIGVVGFCWGAKVVVTLSAKD------PEFDAGVS 149 (242)
T ss_pred ----------------c---ccchhHHHHHHHHHH----HcCCcceeeEEEEeecceEEEEeeccc------hhheeeeE
Confidence 1 111234555555554 444 4568999999999998877632 25677777
Q ss_pred ecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc---EEEEeCC-CCcCC
Q 007311 529 CSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS---VIIEHDC-GHIIP 591 (608)
Q Consensus 529 isG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~---~vv~~~g-GH~ip 591 (608)
+-|..... .....+++|+|.+.|+ .|..+|++...++.+.+++... .+.+|.+ +|.+-
T Consensus 150 ~hps~~d~--~D~~~vk~Pilfl~ae---~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 150 FHPSFVDS--ADIANVKAPILFLFAE---LDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred ecCCcCCh--hHHhcCCCCEEEEeec---ccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 66655543 3567888999999999 8999999999999999987533 5777876 89754
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.9e-05 Score=77.93 Aligned_cols=63 Identities=22% Similarity=0.194 Sum_probs=46.9
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc-EEEEeCCCCc-CCCChh-hHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS-VIIEHDCGHI-IPTRSP-YIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~-~vv~~~gGH~-ip~~~~-~~~~i~~Fl~~ 606 (608)
...++.|+|++-=+ .|...|++..+++++.+..... ..+.-+.||- +-.+.+ +...|..||+.
T Consensus 302 l~~i~~~~lv~gi~---sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIKAPVLVVGIT---SDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCccCEEEEEec---ccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 45689999999888 8999999999999999998653 3344456885 333333 44778888764
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.1e-05 Score=79.14 Aligned_cols=38 Identities=13% Similarity=-0.074 Sum_probs=31.5
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
...|+|||+||.+|..++.+. +.+++.+|++.+..|..
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~-----~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRL-----NGKLGRITGLDPAGPLF 150 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHh-----cCccceeEEecCCcccc
Confidence 457999999999999999865 34799999998877654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00053 Score=68.38 Aligned_cols=126 Identities=20% Similarity=0.133 Sum_probs=84.3
Q ss_pred HHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC---ccc--------------
Q 007311 481 LAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH---SAE-------------- 538 (608)
Q Consensus 481 ~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~---~~~-------------- 538 (608)
..||+.++... .+..-++||||||.-...++.....-..-+++...|++.|..-. ...
T Consensus 119 s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~ 198 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLI 198 (288)
T ss_pred HHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCcccc
Confidence 44555555442 35667999999999999999877643445778899998886541 110
Q ss_pred -----------cccCCCCCCEEEEEcCCC---CCCcccchHHHHHHHHHhccCCcEEEE--e---CCCCc-CCCChhhHH
Q 007311 539 -----------FEHRSINCPSLHIFGGDL---GNDRQVANQASKELAKAFEEGCSVIIE--H---DCGHI-IPTRSPYID 598 (608)
Q Consensus 539 -----------~~~~~i~~PvL~i~G~~~---~~D~~Vp~~~~~~l~~~~~~~~~~vv~--~---~gGH~-ip~~~~~~~ 598 (608)
.....-.+-+|.|.|+-+ -.|..||...+..++.+|......+++ + +.-|. +|..+....
T Consensus 199 ~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~ 278 (288)
T COG4814 199 KTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAK 278 (288)
T ss_pred CcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHH
Confidence 001123467999999842 127889999999999999876333333 2 24564 566566778
Q ss_pred HHHHHHHH
Q 007311 599 EIKSFLQR 606 (608)
Q Consensus 599 ~i~~Fl~~ 606 (608)
.+..||-+
T Consensus 279 yv~~FLw~ 286 (288)
T COG4814 279 YVKNFLWE 286 (288)
T ss_pred HHHHHhhc
Confidence 88888854
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00063 Score=71.54 Aligned_cols=162 Identities=14% Similarity=0.133 Sum_probs=92.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+-.+|+|||+|.++. |-+.++.|++.|+ .++..+.+..|.......+... ... + ......-.=...+
T Consensus 85 ~~~G~vIilp~~g~~~d-~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~-~~~------~--~~~~a~~~~~~~~ 154 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPD-WPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA-TEA------E--EVPSAGDQQLSQP 154 (310)
T ss_pred CCceEEEEecCCCCCCC-cHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC-CCC------C--CCCCCCCCCcCCC
Confidence 44557999999999983 4556779999998 5888888887753321000000 000 0 0000000000000
Q ss_pred CCCCccccccccCCCCCC--CcccccccccHHHHHHHHHHHHhHhCCc-eEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 449 DFSGKRETNWKLADGPFD--PHQYQQQTDGLDVSLAYLKTIFSQEGPF-DGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d--~~~~~~~~~~l~~s~~~L~~~i~~~~~~-~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
. .. ...... ...+....+.+...++.+..+....+.+ .+|+|+++||.+++.+....+ ...+.+
T Consensus 155 ~-----~~----~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~----~~~~da 221 (310)
T PF12048_consen 155 S-----DE----PSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP----PPMPDA 221 (310)
T ss_pred C-----CC----CccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC----CcccCe
Confidence 0 00 000000 0001111223334444444455555555 689999999999999998543 345889
Q ss_pred EEEecCCCCCccc-----cccCCCCCCEEEEEcC
Q 007311 526 AILCSGFALHSAE-----FEHRSINCPSLHIFGG 554 (608)
Q Consensus 526 vIlisG~~~~~~~-----~~~~~i~~PvL~i~G~ 554 (608)
+|+++.+.|.... .....+++|||=|++.
T Consensus 222 LV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~ 255 (310)
T PF12048_consen 222 LVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSA 255 (310)
T ss_pred EEEEeCCCCcchhhhhHHHHhhccCCCEEEEecC
Confidence 9999999987654 3456899999999998
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00035 Score=65.01 Aligned_cols=85 Identities=16% Similarity=0.084 Sum_probs=57.6
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec-CCCCCcc-c----cccCCCCCCEEEEEcCCCCCCcccchHHHHH
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS-GFALHSA-E----FEHRSINCPSLHIFGGDLGNDRQVANQASKE 569 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis-G~~~~~~-~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~ 569 (608)
+|.|.||||.+|..++... ..++.++++++ .+.|+.. + .-..-+++|+|+++|+ .|+.=..+..
T Consensus 92 i~GGkSmGGR~aSmvade~-----~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGt---rD~fGtr~~V-- 161 (213)
T COG3571 92 IIGGKSMGGRVASMVADEL-----QAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGT---RDEFGTRDEV-- 161 (213)
T ss_pred eeccccccchHHHHHHHhh-----cCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeecc---cccccCHHHH--
Confidence 7899999999999998843 45588888877 4444432 2 2356789999999999 7877543333
Q ss_pred HHHHhccCCcEEEEeC-CCCcCC
Q 007311 570 LAKAFEEGCSVIIEHD-CGHIIP 591 (608)
Q Consensus 570 l~~~~~~~~~~vv~~~-gGH~ip 591 (608)
+...-....++++.. +.|-.-
T Consensus 162 -a~y~ls~~iev~wl~~adHDLk 183 (213)
T COG3571 162 -AGYALSDPIEVVWLEDADHDLK 183 (213)
T ss_pred -HhhhcCCceEEEEeccCccccc
Confidence 222222337777765 467653
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=9.8e-05 Score=85.80 Aligned_cols=112 Identities=16% Similarity=-0.003 Sum_probs=73.6
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-----c----------
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-----E---------- 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-----~---------- 538 (608)
..++..++++|.+.=-......+|.|-|.||.|+++++.+. +..++++|...|+.-... .
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~-----Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e 579 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR-----PELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEE 579 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC-----hhheeEEEecCCchhHhhhcccCCCCCChhHHHH
Confidence 34555555555322111234568999999999999988743 456888888766653220 0
Q ss_pred -------------------cccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccCC--cE-EEE---eCCCCcCCC
Q 007311 539 -------------------FEHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEGC--SV-IIE---HDCGHIIPT 592 (608)
Q Consensus 539 -------------------~~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~-vv~---~~gGH~ip~ 592 (608)
....+++.| +|+++|. +|+.||+..+.++...+.... .. ++. .+.||.-..
T Consensus 580 ~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~---~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~ 656 (686)
T PRK10115 580 WGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGL---HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKS 656 (686)
T ss_pred hCCCCCHHHHHHHHHcCchhccCccCCCceeEEecC---CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCc
Confidence 123456899 4566999 899999999999998887532 22 333 467998554
Q ss_pred C
Q 007311 593 R 593 (608)
Q Consensus 593 ~ 593 (608)
.
T Consensus 657 ~ 657 (686)
T PRK10115 657 G 657 (686)
T ss_pred C
Confidence 3
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.6e-05 Score=76.95 Aligned_cols=101 Identities=25% Similarity=0.308 Sum_probs=77.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|+|+|+.++....|. .|...|.+...++.+++| .|..
T Consensus 1 ~pLF~fhp~~G~~~~~~----~L~~~l~~~~~v~~l~a~-------------------------------g~~~------ 39 (257)
T COG3319 1 PPLFCFHPAGGSVLAYA----PLAAALGPLLPVYGLQAP-------------------------------GYGA------ 39 (257)
T ss_pred CCEEEEcCCCCcHHHHH----HHHHHhccCceeeccccC-------------------------------cccc------
Confidence 35899999999999999 999999988999999988 1110
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
..+....+++.++...+.|.+. ||+ .++|||.||.+|+.+|.+... ....+.+++++
T Consensus 40 -----------------~~~~~~~l~~~a~~yv~~Ir~~QP~GPy-~L~G~S~GG~vA~evA~qL~~--~G~~Va~L~ll 99 (257)
T COG3319 40 -----------------GEQPFASLDDMAAAYVAAIRRVQPEGPY-VLLGWSLGGAVAFEVAAQLEA--QGEEVAFLGLL 99 (257)
T ss_pred -----------------cccccCCHHHHHHHHHHHHHHhCCCCCE-EEEeeccccHHHHHHHHHHHh--CCCeEEEEEEe
Confidence 0012345677777766666653 566 799999999999999998763 24678999998
Q ss_pred cCCCC
Q 007311 530 SGFAL 534 (608)
Q Consensus 530 sG~~~ 534 (608)
-.+++
T Consensus 100 D~~~~ 104 (257)
T COG3319 100 DAVPP 104 (257)
T ss_pred ccCCC
Confidence 88877
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00022 Score=66.80 Aligned_cols=116 Identities=18% Similarity=0.201 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------------- 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------------- 538 (608)
...+++.|.++|.+.+ +..+|+|=|.||.-|.+++.+.. ++.+|+-....|...-
T Consensus 42 p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G-------irav~~NPav~P~e~l~gylg~~en~ytg~~y~ 114 (191)
T COG3150 42 PQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG-------IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYV 114 (191)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC-------ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEE
Confidence 5668888999998877 44689999999999999998642 4444443332222110
Q ss_pred -----------cccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 539 -----------FEHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 539 -----------~~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.....++-| .+.+.-.. -|.+.. .++..+.+.. +.++++.++.|.+.....++++|+.|..
T Consensus 115 le~~hI~~l~~~~~~~l~~p~~~~lL~qt--gDEvLD---yr~a~a~y~~-~~~~V~dgg~H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 115 LESRHIATLCVLQFRELNRPRCLVLLSQT--GDEVLD---YRQAVAYYHP-CYEIVWDGGDHKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred eehhhHHHHHHhhccccCCCcEEEeeccc--ccHHHH---HHHHHHHhhh-hhheeecCCCccccchHHhHHHHHHHhc
Confidence 122344445 34445541 388876 4455555554 2556666678999888889999999974
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00032 Score=73.65 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=41.1
Q ss_pred CCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc--CCCC-hhhHHHHHHHHH
Q 007311 546 CPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI--IPTR-SPYIDEIKSFLQ 605 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~--ip~~-~~~~~~i~~Fl~ 605 (608)
-.+++|.++ +|..||......|.+.-+. .++.+.+|||. +-.. ..+.++|.+-|.
T Consensus 290 ~~ii~V~A~---~DaYVPr~~v~~Lq~~WPG--sEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAK---NDAYVPRHGVLSLQEIWPG--SEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEec---CceEechhhcchHHHhCCC--CeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 346677777 8999999888899988887 88888899997 2222 336677776654
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00059 Score=71.55 Aligned_cols=125 Identities=13% Similarity=0.022 Sum_probs=82.4
Q ss_pred cccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-c-----------
Q 007311 474 TDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-E----------- 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-~----------- 538 (608)
.++..+++.+|.+...+. .....|+|.|-||.+|+.++....+. +.....+.++++++..... .
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~-~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~ 208 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR-GLPLPAAQVLISPLLDLTSSAASLPGYGEADL 208 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc-CCCCceEEEEEecccCCcccccchhhcCCccc
Confidence 345667778877665543 35568999999999999999876532 3456788888888754432 0
Q ss_pred ---------------------c---------c-cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEeC
Q 007311 539 ---------------------F---------E-HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEHD 585 (608)
Q Consensus 539 ---------------------~---------~-~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~ 585 (608)
. . ... --|+++++|+ .|.+.+ .++.+++.+...+ +++..++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~---~D~l~~--~~~~~a~~L~~agv~~~~~~~~ 282 (312)
T COG0657 209 LDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAE---FDPLRD--EGEAYAERLRAAGVPVELRVYP 282 (312)
T ss_pred cCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecC---CCcchh--HHHHHHHHHHHcCCeEEEEEeC
Confidence 0 0 011 3689999999 899887 6777777776543 4556666
Q ss_pred C-CCcCCCC-----hhhHHHHHHHHH
Q 007311 586 C-GHIIPTR-----SPYIDEIKSFLQ 605 (608)
Q Consensus 586 g-GH~ip~~-----~~~~~~i~~Fl~ 605 (608)
+ .|.+... ..-...+.+|+.
T Consensus 283 g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 283 GMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred CcceeccccCcHHHHHHHHHHHHHHH
Confidence 5 7876221 223455666665
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00014 Score=69.82 Aligned_cols=119 Identities=20% Similarity=0.208 Sum_probs=79.3
Q ss_pred ccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--cccCCCCCCEEE
Q 007311 473 QTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--FEHRSINCPSLH 550 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--~~~~~i~~PvL~ 550 (608)
..++...+++|+...-... +..-|.|||.|+.||+.+|.+.+ .. .+++|..++.... .......+|.++
T Consensus 84 E~~Da~aaldW~~~~hp~s-~~~~l~GfSFGa~Ia~~la~r~~------e~--~~~is~~p~~~~~dfs~l~P~P~~~lv 154 (210)
T COG2945 84 ELEDAAAALDWLQARHPDS-ASCWLAGFSFGAYIAMQLAMRRP------EI--LVFISILPPINAYDFSFLAPCPSPGLV 154 (210)
T ss_pred hHHHHHHHHHHHHhhCCCc-hhhhhcccchHHHHHHHHHHhcc------cc--cceeeccCCCCchhhhhccCCCCCcee
Confidence 3456777777776552221 22247899999999999998653 22 2334443333321 234567899999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh-hHHHHHHHHH
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP-YIDEIKSFLQ 605 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~-~~~~i~~Fl~ 605 (608)
|+|+ .|.+++.....++++-.+. ..++..+.+|++...-. ..+.+.+||.
T Consensus 155 i~g~---~Ddvv~l~~~l~~~~~~~~--~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 155 IQGD---ADDVVDLVAVLKWQESIKI--TVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred EecC---hhhhhcHHHHHHhhcCCCC--ceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9999 8999998888888776332 55566677999877544 5677788874
|
|
| >COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=6.4e-05 Score=77.42 Aligned_cols=111 Identities=18% Similarity=0.064 Sum_probs=71.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh--hhhhccccCCCCccccC----cccccCCCch--HHHHhh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL--YETRIGKFRTPSVETLD----PEIRQFSDLP--TWIDNN 200 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~--~E~~~Gh~~g~~~~~l~----~~~~~~~~~~--~~~~~~ 200 (608)
..-++|+.+.+.|++. +..-.++.+++++.. .+|..|||+||....++ .+...-..+| +.+.+.
T Consensus 10 ~~lVs~~wl~~~l~~~--------~~~~~d~~~~~~~~~~~~~Y~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e~fa~~ 81 (285)
T COG2897 10 EFLVSPDWLAENLDDP--------AVVIVDARIILPDPDDAEEYLEGHIPGAVFFDWEADLSDPVPLPHMLPSPEQFAKL 81 (285)
T ss_pred ceEEcHHHHHhhcccc--------ccccCceEEEeCCcchHHHHHhccCCCCEecCHHHhhcCCCCCCCCCCCHHHHHHH
Confidence 4568899999888642 011136667766666 89999999996421111 1110011222 233322
Q ss_pred ---hhhcCCCeEEEEcCCCcc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 201 ---AEQLQGKHVLMYCTGGIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 201 ---~~~~k~k~Iv~yCtgGiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+....|.+||+|-.+|.- +.+|.-.|+- +|.+||+.|.||+.+|+.+
T Consensus 82 ~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~--~Gh~~V~iLdGG~~~W~~~ 132 (285)
T COG2897 82 LGELGIRNDDTVVVYDDGGGFFAARAWWLLRY--LGHENVRILDGGLPAWKAA 132 (285)
T ss_pred HHHcCCCCCCEEEEECCCCCeehHHHHHHHHH--cCCCceEEecCCHHHHHHc
Confidence 345789999999976665 4455555555 4999999999999999975
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00037 Score=79.15 Aligned_cols=40 Identities=13% Similarity=-0.101 Sum_probs=27.4
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+++.+.++++.+.-- ....++++|+|+||.+++.+|...
T Consensus 79 ~~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~ 118 (550)
T TIGR00976 79 AADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ 118 (550)
T ss_pred chHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccC
Confidence 4556666776644311 123568999999999999998853
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00035 Score=82.01 Aligned_cols=127 Identities=16% Similarity=0.207 Sum_probs=89.0
Q ss_pred cccHHHHHHHHHHHH----h--------H--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC----
Q 007311 474 TDGLDVSLAYLKTIF----S--------Q--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH---- 535 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i----~--------~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~---- 535 (608)
.++..++++||...- + + ....++++|.|+||.+++.+|.. +++.++++|..++....
T Consensus 305 ~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~-----~pp~LkAIVp~a~is~~yd~y 379 (767)
T PRK05371 305 IESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATT-----GVEGLETIIPEAAISSWYDYY 379 (767)
T ss_pred HHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhh-----CCCcceEEEeeCCCCcHHHHh
Confidence 456778888887421 1 1 02345899999999999998883 35667777775543100
Q ss_pred -c------------------------------------------------------cc-----------cccCCCCCCEE
Q 007311 536 -S------------------------------------------------------AE-----------FEHRSINCPSL 549 (608)
Q Consensus 536 -~------------------------------------------------------~~-----------~~~~~i~~PvL 549 (608)
. .. ....++++|+|
T Consensus 380 r~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvL 459 (767)
T PRK05371 380 RENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVL 459 (767)
T ss_pred hcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEE
Confidence 0 00 11246899999
Q ss_pred EEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeCCCCcCCCCh---hhHHHHHHHHHHhC
Q 007311 550 HIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHDCGHIIPTRS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 550 ~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~gGH~ip~~~---~~~~~i~~Fl~~~L 608 (608)
+|||. +|..++...+.++++.+.. ....++.|.++|..+... ++.+.+.+||.++|
T Consensus 460 lIhGw---~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 460 VVHGL---NDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred EEeeC---CCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 99999 8999998889888888864 236778889999765432 35778889998765
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00063 Score=76.03 Aligned_cols=45 Identities=22% Similarity=0.331 Sum_probs=40.6
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
...|++|+|.+.|. .|.++|.+.+.++.+++... .+++..++||+
T Consensus 437 L~~I~~Pvl~va~~---~DHIvPw~s~~~~~~l~gs~-~~fvl~~gGHI 481 (560)
T TIGR01839 437 LKKVKCDSFSVAGT---NDHITPWDAVYRSALLLGGK-RRFVLSNSGHI 481 (560)
T ss_pred hhcCCCCeEEEecC---cCCcCCHHHHHHHHHHcCCC-eEEEecCCCcc
Confidence 46789999999999 89999999999999998764 88888899997
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00025 Score=69.57 Aligned_cols=112 Identities=17% Similarity=0.068 Sum_probs=75.8
Q ss_pred ccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC-cc--c--------
Q 007311 473 QTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH-SA--E-------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~-~~--~-------- 538 (608)
..++..+++++|.+...+. ....+|+|+|-||.+|+.++....+. +...++++++++++... .. .
T Consensus 48 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~-~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~ 126 (211)
T PF07859_consen 48 ALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR-GLPKPKGIILISPWTDLQDFDGPSYDDSNEN 126 (211)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-TTCHESEEEEESCHSSTSTSSCHHHHHHHHH
T ss_pred cccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh-cccchhhhhcccccccchhcccccccccccc
Confidence 4567778888887775443 24557999999999999999876542 23569999999998533 10 0
Q ss_pred -----------------------c---------c-cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEE
Q 007311 539 -----------------------F---------E-HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIE 583 (608)
Q Consensus 539 -----------------------~---------~-~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~ 583 (608)
. . ...--.|+++++|+ .|..+ ..+.++++.++..+ ++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~---~D~l~--~~~~~~~~~L~~~gv~v~~~~ 201 (211)
T PF07859_consen 127 KDDPFLPAPKIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGE---DDVLV--DDSLRFAEKLKKAGVDVELHV 201 (211)
T ss_dssp STTSSSBHHHHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEET---TSTTH--HHHHHHHHHHHHTT-EEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCeeeeccc---cccch--HHHHHHHHHHHHCCCCEEEEE
Confidence 0 0 00112489999999 78765 46788888887543 45556
Q ss_pred eCC-CCcC
Q 007311 584 HDC-GHII 590 (608)
Q Consensus 584 ~~g-GH~i 590 (608)
+++ +|.+
T Consensus 202 ~~g~~H~f 209 (211)
T PF07859_consen 202 YPGMPHGF 209 (211)
T ss_dssp ETTEETTG
T ss_pred ECCCeEEe
Confidence 665 7864
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0014 Score=71.63 Aligned_cols=101 Identities=16% Similarity=0.039 Sum_probs=68.4
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----------c--cc--cCCCCCCEEEEEcCCCCCCc
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA----------E--FE--HRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~----------~--~~--~~~i~~PvL~i~G~~~~~D~ 560 (608)
.+|.|+||||..|+.+++++ +..|+.++++||...... + .. .....+.+++-+|+ .|.
T Consensus 290 ~~IaG~S~GGl~AL~~al~~-----Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~~~~~~lr~~i~~G~---~E~ 361 (411)
T PRK10439 290 TVVAGQSFGGLAALYAGLHW-----PERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGEVSARGLRIVLEAGR---REP 361 (411)
T ss_pred eEEEEEChHHHHHHHHHHhC-----cccccEEEEeccceecCCccCCchhHHHHHHHhcccCCCCceEEEeCCC---CCc
Confidence 46999999999999999954 678999999998752110 0 01 11233568888998 665
Q ss_pred ccchHHHHHHHHHhccCC--cEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEGC--SVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~--~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
.+ .+..+++++.++..+ ..+.+++|||....-+..+.+-..||
T Consensus 362 ~~-~~~~~~l~~~L~~~G~~~~~~~~~GGHd~~~Wr~~L~~~L~~l 406 (411)
T PRK10439 362 MI-MRANQALYAQLHPAGHSVFWRQVDGGHDALCWRGGLIQGLIDL 406 (411)
T ss_pred hH-HHHHHHHHHHHHHCCCcEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 44 466788999888643 56677889998755444443333333
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0014 Score=70.93 Aligned_cols=63 Identities=17% Similarity=0.241 Sum_probs=46.0
Q ss_pred cCCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHh---ccCCc-EEEEeCCCCc-CCCC----hhhHHHHHHHHHH
Q 007311 541 HRSIN-CPSLHIFGGDLGNDRQVANQASKELAKAF---EEGCS-VIIEHDCGHI-IPTR----SPYIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~---~~~~~-~vv~~~gGH~-ip~~----~~~~~~i~~Fl~~ 606 (608)
...|+ +|+|.|.|+ +|.++|+..++.+.+++ ..... .....++||. +-.. .+....|.+||.+
T Consensus 333 l~~I~~~pll~V~ge---~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGE---NDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEecc---CCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 45788 999999999 89999999999999987 33223 4444588997 2111 1245678888865
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00048 Score=74.42 Aligned_cols=54 Identities=26% Similarity=0.268 Sum_probs=36.0
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~ 554 (608)
++++|||.||+.|+.++.. ..+++.+|++-+|..+........++.|+|+|..+
T Consensus 230 i~~~GHSFGGATa~~~l~~------d~r~~~~I~LD~W~~Pl~~~~~~~i~~P~L~InSe 283 (379)
T PF03403_consen 230 IGLAGHSFGGATALQALRQ------DTRFKAGILLDPWMFPLGDEIYSKIPQPLLFINSE 283 (379)
T ss_dssp EEEEEETHHHHHHHHHHHH-------TT--EEEEES---TTS-GGGGGG--S-EEEEEET
T ss_pred eeeeecCchHHHHHHHHhh------ccCcceEEEeCCcccCCCcccccCCCCCEEEEECc
Confidence 3599999999999988874 36799999999998765544456789999999887
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0064 Score=62.57 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=72.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++..||++.|.=+-.+.+..-+..|.+.|...+.++.+.-. |... +.. .... .
T Consensus 1 ~~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~-----------------~~~----~~~~--~--- 54 (266)
T PF10230_consen 1 PRPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTS-----------------PSN----SKFS--P--- 54 (266)
T ss_pred CcEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCC-----------------ccc----cccc--C---
Confidence 35679999999999999998888999988777877777422 1100 000 0000 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....|+ ..+.++.-++.|.+.+.. .....+|+|||.||-|++.++.+.. ....++.++
T Consensus 55 -----------~~~~~s------L~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~--~~~~~V~~~ 115 (266)
T PF10230_consen 55 -----------NGRLFS------LQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP--DLKFRVKKV 115 (266)
T ss_pred -----------CCCccC------HHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc--ccCCceeEE
Confidence 011111 123455555666666654 2344579999999999999998764 123456666
Q ss_pred EEecCC
Q 007311 527 ILCSGF 532 (608)
Q Consensus 527 IlisG~ 532 (608)
+++-+.
T Consensus 116 ~lLfPT 121 (266)
T PF10230_consen 116 ILLFPT 121 (266)
T ss_pred EEeCCc
Confidence 665544
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=97.41 E-value=9.8e-05 Score=78.30 Aligned_cols=82 Identities=16% Similarity=0.057 Sum_probs=44.4
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc-------------------------c---------
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS-------------------------A--------- 537 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~-------------------------~--------- 537 (608)
...++++||||||..++.++++- .+++..|+.+-..... +
T Consensus 225 ~~RIG~~GfSmGg~~a~~LaALD------dRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~P 298 (390)
T PF12715_consen 225 PDRIGCMGFSMGGYRAWWLAALD------DRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFP 298 (390)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHH-------TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HH
T ss_pred ccceEEEeecccHHHHHHHHHcc------hhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccH
Confidence 34557999999999999999863 4565555422111000 0
Q ss_pred ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-CcEEEEe
Q 007311 538 EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-CSVIIEH 584 (608)
Q Consensus 538 ~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-~~~vv~~ 584 (608)
+-..-...-|+|++-|. .|+.+|. .++.++..... ..++..+
T Consensus 299 dIasliAPRPll~~nG~---~Dklf~i--V~~AY~~~~~p~n~~~~~~ 341 (390)
T PF12715_consen 299 DIASLIAPRPLLFENGG---KDKLFPI--VRRAYAIMGAPDNFQIHHY 341 (390)
T ss_dssp HHHHTTTTS-EEESS-B----HHHHHH--HHHHHHHTT-GGGEEE---
T ss_pred HHHHHhCCCcchhhcCC---cccccHH--HHHHHHhcCCCcceEEeec
Confidence 01123457899999999 8998865 56666665532 2444443
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0031 Score=63.50 Aligned_cols=163 Identities=19% Similarity=0.151 Sum_probs=96.1
Q ss_pred CCCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 368 VCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 368 ~~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
....-|.|+|+|||.-..+.+.+.+.-++. .++-+|.+|--.. .|-+
T Consensus 42 ~~G~yPVilF~HG~~l~ns~Ys~lL~HIAS---HGfIVVAPQl~~~-----------------------------~~p~- 88 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYNSFYSQLLAHIAS---HGFIVVAPQLYTL-----------------------------FPPD- 88 (307)
T ss_pred cCCCccEEEEeechhhhhHHHHHHHHHHhh---cCeEEEechhhcc-----------------------------cCCC-
Confidence 334568999999999998888733333332 3566665542210 1100
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--------CceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--------PFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--------~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
-+...+...+.++||..-+.... ...++.|||.||..|..+|+.+. .
T Consensus 89 ----------------------~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a---~ 143 (307)
T PF07224_consen 89 ----------------------GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA---T 143 (307)
T ss_pred ----------------------chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc---c
Confidence 01224556677777777766532 23369999999999999998542 2
Q ss_pred CCCccEEEEecCCCCCc---------cc--cccCCCCCCEEEEEcCCCC--CCcccch-----HHHHHHHHHhccCCcEE
Q 007311 520 EIDFRFAILCSGFALHS---------AE--FEHRSINCPSLHIFGGDLG--NDRQVAN-----QASKELAKAFEEGCSVI 581 (608)
Q Consensus 520 ~~~l~~vIlisG~~~~~---------~~--~~~~~i~~PvL~i~G~~~~--~D~~Vp~-----~~~~~l~~~~~~~~~~v 581 (608)
..+|.++|.+-...-.. .. ...-.+.+|+++|-.. -| .....|. -..++..+.|+..+..+
T Consensus 144 ~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~SF~l~iPv~VIGtG-Lg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hf 222 (307)
T PF07224_consen 144 SLKFSALIGIDPVAGTSKGKQTPPPILTYVPQSFDLDIPVLVIGTG-LGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHF 222 (307)
T ss_pred cCchhheecccccCCCCCCCCCCCCeeecCCcccccCCceEEEecC-cCccccCCCCCCCCCCcCHHHHHHhhcccceee
Confidence 34555666543332111 11 1234567999997432 11 2222221 23566777777776778
Q ss_pred EEeCCCCc
Q 007311 582 IEHDCGHI 589 (608)
Q Consensus 582 v~~~gGH~ 589 (608)
+.-+.||+
T Consensus 223 V~~dYGHm 230 (307)
T PF07224_consen 223 VAKDYGHM 230 (307)
T ss_pred eecccccc
Confidence 88888998
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.003 Score=60.71 Aligned_cols=104 Identities=12% Similarity=0.143 Sum_probs=62.5
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------------------------
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------------------------ 538 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------------------------ 538 (608)
..++|||+||.+|..++..... ....+.+++++....+....
T Consensus 66 ~~l~g~s~Gg~~a~~~a~~l~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (212)
T smart00824 66 FVLVGHSSGGLLAHAVAARLEA--RGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRL 143 (212)
T ss_pred eEEEEECHHHHHHHHHHHHHHh--CCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHH
Confidence 3899999999999999987652 23456777776654432100
Q ss_pred ---cccCCCCCCEEEEEcCCCCCCccc-chHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGDLGNDRQV-ANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~~~~D~~V-p~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.....+.+|+.++.|+ .|... +......+.+... ....+...+++|...... ....+..-+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~W~~~~~-~~~~~~~~~g~H~~~~~~-~~~~~~~~~~ 209 (212)
T smart00824 144 FGGWTPGPVAAPTLLVRAS---EPLAEWPDEDPDGWRAHWP-LPHTVVDVPGDHFTMMEE-HAAATARAVH 209 (212)
T ss_pred hccCCCCCCCCCEEEEecc---CCCCCCCCCCcccccCCCC-CCceeEEccCchHHHHHH-hHHHHHHHHH
Confidence 0123567899999998 56443 2222223333333 347788889999864322 4455544443
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0036 Score=65.24 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhc-cC--CcEEEEeC-CCCcCCCChhhHHHHHHHHHHh
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFE-EG--CSVIIEHD-CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~-~~--~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
-+.|+++.||. .|.+||.....++.+.+. .+ .++++.+. ++|.... ..-......||.++
T Consensus 218 P~~Pv~i~~g~---~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~-~~~~~~a~~Wl~~r 281 (290)
T PF03583_consen 218 PTVPVLIYQGT---ADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA-FASAPDALAWLDDR 281 (290)
T ss_pred CCCCEEEEecC---CCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh-hcCcHHHHHHHHHH
Confidence 36999999999 899999999999886554 33 35555555 4887532 13457778888765
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00063 Score=65.81 Aligned_cols=105 Identities=14% Similarity=0.106 Sum_probs=71.5
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------------cccCCCCCCEEE
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-----------------------FEHRSINCPSLH 550 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-----------------------~~~~~i~~PvL~ 550 (608)
...+.|||-||-+|+.+..++. .+++.++++++|.+-.... .....++.|+|+
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r----~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~v~~~ilV 212 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQR----SPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTDVTVWILV 212 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhc----CchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcCceeeeeE
Confidence 3468899999999999887654 5678899998887654321 234567899999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCC--hhhHHHHHHHHHHh
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTR--SPYIDEIKSFLQRF 607 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~--~~~~~~i~~Fl~~~ 607 (608)
+.+. .|.---.+..+..++.+.. ..+..+.+ +|.-... .-.-..+..|++++
T Consensus 213 v~~~---~espklieQnrdf~~q~~~--a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 213 VAAE---HESPKLIEQNRDFADQLRK--ASFTLFKNYDHYDIIEETAIDDSDVSRFLRNI 267 (270)
T ss_pred eeec---ccCcHHHHhhhhHHHHhhh--cceeecCCcchhhHHHHhccccchHHHHHHHH
Confidence 9999 7765556677777777665 55566665 8872221 11234556666654
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0019 Score=66.53 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=72.6
Q ss_pred ccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------
Q 007311 473 QTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------- 538 (608)
...+..++++++.+. .-..-.++++|.|.+|..++.+|. ..++.|+++|..++......+
T Consensus 82 e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~-----~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~ 155 (272)
T PF02129_consen 82 EAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAA-----RRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFA 155 (272)
T ss_dssp HHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHT-----TT-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHH
T ss_pred HHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHh-----cCCCCceEEEecccCCcccccchhcCCcccccchh
Confidence 455677777777664 111224589999999999999998 346778888887655433220
Q ss_pred ------------------------------------------------------------------cccCCCCCCEEEEE
Q 007311 539 ------------------------------------------------------------------FEHRSINCPSLHIF 552 (608)
Q Consensus 539 ------------------------------------------------------------------~~~~~i~~PvL~i~ 552 (608)
....++++|+|++.
T Consensus 156 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~ 235 (272)
T PF02129_consen 156 GWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVG 235 (272)
T ss_dssp HHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEE
T ss_pred HHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEec
Confidence 12368899999999
Q ss_pred cCCCCCCcccchHHHHHHHHHhccCC---cEEEEeCCCCc
Q 007311 553 GGDLGNDRQVANQASKELAKAFEEGC---SVIIEHDCGHI 589 (608)
Q Consensus 553 G~~~~~D~~Vp~~~~~~l~~~~~~~~---~~vv~~~gGH~ 589 (608)
|- .|.... ..+.+..+.+.... ..++..+.+|.
T Consensus 236 Gw---~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 236 GW---YDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp ET---TCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred cc---CCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 99 896666 66777777777654 27888888885
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0046 Score=59.81 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc------------cc-------cccCCC-CCCEEEE
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS------------AE-------FEHRSI-NCPSLHI 551 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~------------~~-------~~~~~i-~~PvL~i 551 (608)
.....|+|||+||-|.-.+.-+.+. .....++.+++++....-. .. .+..++ ..|++-|
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~-~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~Ci 145 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPA-ALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCI 145 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCH-HHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEE
Confidence 3556899999999666555544321 1134566666655433211 11 122233 3699999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~ 593 (608)
+|++ .+|...| .++....+++..+|||++-.+
T Consensus 146 yG~~-E~d~~cp---------~l~~~~~~~i~lpGgHHfd~d 177 (192)
T PF06057_consen 146 YGED-EDDSLCP---------SLRQPGVEVIALPGGHHFDGD 177 (192)
T ss_pred EcCC-CCCCcCc---------cccCCCcEEEEcCCCcCCCCC
Confidence 9993 2232222 234445889999999999664
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0082 Score=60.57 Aligned_cols=140 Identities=19% Similarity=0.142 Sum_probs=84.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+.+..+|++|||..+-+.-..+++.+...+.-...+|.+ .|=-
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~F----------------------------------sWPS--- 58 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILF----------------------------------SWPS--- 58 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEE----------------------------------EcCC---
Confidence 456689999999999887766777777776522233332 3310
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhC----C
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKG----E 520 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~----~ 520 (608)
.+ ....|....+....+...|.++|... ...+.|++||||+.+.+.+......... .
T Consensus 59 ------------~g--~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~ 124 (233)
T PF05990_consen 59 ------------DG--SLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVK 124 (233)
T ss_pred ------------CC--ChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhH
Confidence 00 01111111223344455555555442 3455799999999999998776543211 2
Q ss_pred CCccEEEEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccc
Q 007311 521 IDFRFAILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 521 ~~l~~vIlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp 563 (608)
..+.-+|++++-.+...- .......-++.+.+-. +|....
T Consensus 125 ~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~---~D~AL~ 168 (233)
T PF05990_consen 125 ARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSR---NDRALK 168 (233)
T ss_pred hhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcC---CchHHH
Confidence 367889999877665321 1233455778888887 788764
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0023 Score=64.56 Aligned_cols=100 Identities=17% Similarity=0.048 Sum_probs=63.1
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc-------------cc-----c---ccCCCCCCEEEEEc
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS-------------AE-----F---EHRSINCPSLHIFG 553 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~-------------~~-----~---~~~~i~~PvL~i~G 553 (608)
.+|.|+||||..|+.+++++ +..|+.++++||+..+. .. . .......++.+..|
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~-----Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G 191 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRH-----PDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQKKKPLRIYLDVG 191 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHS-----TTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHTTSEEEEEEEEE
T ss_pred eEEeccCCCcHHHHHHHHhC-----ccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhcccCCCeEEEEeC
Confidence 48999999999999999954 67899999999873221 00 0 13455677888899
Q ss_pred CCCCCCcccc----------hHHHHHHHHHhcc--CCcEEEEeCCCCcCCCChhhHHHHHH
Q 007311 554 GDLGNDRQVA----------NQASKELAKAFEE--GCSVIIEHDCGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 554 ~~~~~D~~Vp----------~~~~~~l~~~~~~--~~~~vv~~~gGH~ip~~~~~~~~i~~ 602 (608)
+ .|.... ....+++.+.+.. .......++|+|..+.-...+.....
T Consensus 192 ~---~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~G~H~~~~W~~~l~~~L~ 249 (251)
T PF00756_consen 192 T---KDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFPGGHDWAYWRRRLPDALP 249 (251)
T ss_dssp T---TSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEHSESSHHHHHHHHHHHHH
T ss_pred C---CCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEecCccchhhHHHHHHHHHh
Confidence 9 565221 1233445555542 22455566789986554444444333
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00083 Score=68.50 Aligned_cols=111 Identities=18% Similarity=0.332 Sum_probs=75.5
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGK 207 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k 207 (608)
.-+.|+++.++.+|+..- .++- .+.+|||+|=+|||.-|||.. ++|+..++ ++...+.. ....--.
T Consensus 240 s~~RIs~etlk~vl~g~~------~~~f-~kCiIIDCRFeYEY~GGHIin----aVNi~s~~--~l~~~F~h-kplThp~ 305 (427)
T COG5105 240 SIQRISVETLKQVLEGMY------NIDF-LKCIIIDCRFEYEYRGGHIIN----AVNISSTK--KLGLLFRH-KPLTHPR 305 (427)
T ss_pred chhhcCHHHHHHHHhchh------hhhh-hceeEEeecceeeecCceeee----eeecchHH--HHHHHHHh-ccccCce
Confidence 357899999999997421 0111 136799999999999999987 56554221 11111100 0111235
Q ss_pred eEEEEcC-CCccHHHHHHHHHhcC----------CCCCcEEEcCccHHHHHHhCCC
Q 007311 208 HVLMYCT-GGIRCEMASAYVRSKG----------AGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 208 ~Iv~yCt-gGiR~~~a~~~L~~~~----------~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
-+|+.|. +..|.-..+..||... .=|-+||.|+||..+.-+.+|+
T Consensus 306 aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~n~p~ 361 (427)
T COG5105 306 ALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYSNYPD 361 (427)
T ss_pred eEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhhcCcc
Confidence 6888895 6799999999998641 1367899999999999998886
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0094 Score=59.47 Aligned_cols=163 Identities=19% Similarity=0.254 Sum_probs=90.1
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+.+.++||+-.|||.....|. .|+..|. .++.++-.|.-+....
T Consensus 27 ~~~~~tiliA~Gf~rrmdh~a----gLA~YL~~NGFhViRyDsl~HvGl------------------------------- 71 (294)
T PF02273_consen 27 PKRNNTILIAPGFARRMDHFA----GLAEYLSANGFHVIRYDSLNHVGL------------------------------- 71 (294)
T ss_dssp ---S-EEEEE-TT-GGGGGGH----HHHHHHHTTT--EEEE---B-----------------------------------
T ss_pred cccCCeEEEecchhHHHHHHH----HHHHHHhhCCeEEEeccccccccC-------------------------------
Confidence 355689999999999999999 8888886 6888888875533220
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.+|..+ ++ .......++..+.+++...+ +..+++.-|.-|.+|+..+. ...+.++
T Consensus 72 -------------SsG~I~--ef--tms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~-------~i~lsfL 127 (294)
T PF02273_consen 72 -------------SSGDIN--EF--TMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAA-------DINLSFL 127 (294)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTT-------TS--SEE
T ss_pred -------------CCCChh--hc--chHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhh-------ccCcceE
Confidence 000000 00 01123444444555555544 56789999999999999997 3468888
Q ss_pred EEecCCCCCccc-------------------------------------------------cccCCCCCCEEEEEcCCCC
Q 007311 527 ILCSGFALHSAE-------------------------------------------------FEHRSINCPSLHIFGGDLG 557 (608)
Q Consensus 527 IlisG~~~~~~~-------------------------------------------------~~~~~i~~PvL~i~G~~~~ 557 (608)
|.+-|..-.... .....+.+|++.++++
T Consensus 128 itaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~--- 204 (294)
T PF02273_consen 128 ITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTAN--- 204 (294)
T ss_dssp EEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEET---
T ss_pred EEEeeeeeHHHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeC---
Confidence 887776533210 2346789999999999
Q ss_pred CCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCC
Q 007311 558 NDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTR 593 (608)
Q Consensus 558 ~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~ 593 (608)
+|..|......++.+......+.+... +.+|..-..
T Consensus 205 ~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~en 241 (294)
T PF02273_consen 205 DDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGEN 241 (294)
T ss_dssp T-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSS
T ss_pred CCccccHHHHHHHHHhcCCCceeEEEecCccchhhhC
Confidence 899998888888777666655555554 458987553
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0024 Score=66.19 Aligned_cols=114 Identities=12% Similarity=0.095 Sum_probs=62.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++.|||+-|.++.--.. .-+..|++.|. ..+.++-+..... +..|...
T Consensus 32 ~~~~llfIGGLtDGl~tv-pY~~~La~aL~~~~wsl~q~~LsSS---------------------------y~G~G~~-- 81 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTV-PYLPDLAEALEETGWSLFQVQLSSS---------------------------YSGWGTS-- 81 (303)
T ss_dssp SSSEEEEE--TT--TT-S-TCHHHHHHHHT-TT-EEEEE--GGG---------------------------BTTS-S---
T ss_pred CCcEEEEECCCCCCCCCC-chHHHHHHHhccCCeEEEEEEecCc---------------------------cCCcCcc--
Confidence 556899999999976431 12237888886 4777777754411 2355441
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
...+..+.+.+.++||...-.. ....++|+|||-|+.-++.++..........++.++|
T Consensus 82 -------------------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~I 142 (303)
T PF08538_consen 82 -------------------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAI 142 (303)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEE
T ss_pred -------------------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEE
Confidence 1123355677777776655211 2244589999999999999988653211247799999
Q ss_pred EecCCC
Q 007311 528 LCSGFA 533 (608)
Q Consensus 528 lisG~~ 533 (608)
+-++..
T Consensus 143 LQApVS 148 (303)
T PF08538_consen 143 LQAPVS 148 (303)
T ss_dssp EEEE--
T ss_pred EeCCCC
Confidence 966653
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.038 Score=58.65 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=78.0
Q ss_pred cHHHHHHHHHH--HHhHh--CCceEEEecChhHHHHHHHHHHHhhhh-CCCCccEEEEecCCCCCcc----c--------
Q 007311 476 GLDVSLAYLKT--IFSQE--GPFDGILGFSQGAAMAASVCAQWERLK-GEIDFRFAILCSGFALHSA----E-------- 538 (608)
Q Consensus 476 ~l~~s~~~L~~--~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~-~~~~l~~vIlisG~~~~~~----~-------- 538 (608)
+--.++.|+.+ .+... ..++.|.|=|-||.+|..+|.+..+.. ....+++.|++.++.-... +
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~ 224 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS 224 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCC
Confidence 44456666665 33332 345679999999999999999876421 3578999999887753211 0
Q ss_pred -------------------------------c-----ccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccCCc--
Q 007311 539 -------------------------------F-----EHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEGCS-- 579 (608)
Q Consensus 539 -------------------------------~-----~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~-- 579 (608)
. ......+| +|++..+ .|... +.+...++.++..+.
T Consensus 225 ~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag---~D~L~--D~~~~Y~~~Lkk~Gv~v 299 (336)
T KOG1515|consen 225 PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAG---YDVLR--DEGLAYAEKLKKAGVEV 299 (336)
T ss_pred cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeC---chhhh--hhhHHHHHHHHHcCCeE
Confidence 0 01123344 8888777 78765 456666666665433
Q ss_pred EE-EEeCCCCcCCCC-------hhhHHHHHHHHHHh
Q 007311 580 VI-IEHDCGHIIPTR-------SPYIDEIKSFLQRF 607 (608)
Q Consensus 580 ~v-v~~~gGH~ip~~-------~~~~~~i~~Fl~~~ 607 (608)
++ ++.++.|.+... .+.++.+.+|+.+.
T Consensus 300 ~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 300 TLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 33 344567863222 12577888888764
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0033 Score=73.17 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=30.8
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAP 411 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP 411 (608)
.+.||++||++.+...|. .+++.|. .+++++.+|.|
T Consensus 449 ~P~VVllHG~~g~~~~~~----~lA~~La~~Gy~VIaiDlp 485 (792)
T TIGR03502 449 WPVVIYQHGITGAKENAL----AFAGTLAAAGVATIAIDHP 485 (792)
T ss_pred CcEEEEeCCCCCCHHHHH----HHHHHHHhCCcEEEEeCCC
Confidence 468999999999999999 6666665 57999999988
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.021 Score=61.00 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=73.3
Q ss_pred CCccEEEEecCCCCChHHHHHHH---HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNASSFKGRT---ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~---~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...|.||.|||-|---..+-.|+ .++.+.|+ ...++.+|.....+- ..
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~-----------------------~~----- 170 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSD-----------------------EH----- 170 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccc-----------------------cC-----
Confidence 34589999999886655544443 46677777 467788875522110 00
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
+.. | ...+.++++....+++.++ .-..|+|=|-||.+|+.+.....+.......+.
T Consensus 171 ---------------~~~-----y---PtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~ 227 (374)
T PF10340_consen 171 ---------------GHK-----Y---PTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKS 227 (374)
T ss_pred ---------------CCc-----C---chHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCce
Confidence 000 0 1235566666666664555 334689999999999998776554233345689
Q ss_pred EEEecCCCCCc
Q 007311 526 AILCSGFALHS 536 (608)
Q Consensus 526 vIlisG~~~~~ 536 (608)
+|++|+|..+.
T Consensus 228 ~iLISPWv~l~ 238 (374)
T PF10340_consen 228 AILISPWVNLV 238 (374)
T ss_pred eEEECCCcCCc
Confidence 99999998665
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0026 Score=68.00 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=40.2
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
....|+||++.+.|+ +|.+.|.+.......++.+ .++++..++||+
T Consensus 325 dL~~It~pvy~~a~~---~DhI~P~~Sv~~g~~l~~g-~~~f~l~~sGHI 370 (445)
T COG3243 325 DLGDITCPVYNLAAE---EDHIAPWSSVYLGARLLGG-EVTFVLSRSGHI 370 (445)
T ss_pred chhhcccceEEEeec---ccccCCHHHHHHHHHhcCC-ceEEEEecCceE
Confidence 356899999999999 8999998888888888887 488888999998
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0043 Score=65.59 Aligned_cols=174 Identities=14% Similarity=0.058 Sum_probs=102.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCC--ccceeeec
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENC--KKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~W~~ 446 (608)
.+.|.|++=||.|++.+.|. .+++++.+ ++-|..++-|-.- .++.+ ...... ..-..|++
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~----~~A~~lAs~Gf~Va~~~hpgs~------------~~~~~-~~~~~~~~~~p~~~~e 131 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFA----WLAEHLASYGFVVAAPDHPGSN------------AGGAP-AAYAGPGSYAPAEWWE 131 (365)
T ss_pred CcCCeEEecCCCCCCccchh----hhHHHHhhCceEEEeccCCCcc------------cccCC-hhhcCCcccchhhhhc
Confidence 35678888899999999999 88888875 4444444433110 00000 000000 00113333
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHH-----HhHh--CCceEEEecChhHHHHHHHHHHHhh---
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTI-----FSQE--GPFDGILGFSQGAAMAASVCAQWER--- 516 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~-----i~~~--~~~~~IlGFSQGa~vAl~la~~~~~--- 516 (608)
+..++...+.+|.+. +... ...++++|||.||..++.++-....
T Consensus 132 --------------------------rp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~ 185 (365)
T COG4188 132 --------------------------RPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEA 185 (365)
T ss_pred --------------------------ccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHH
Confidence 345677778888777 2221 2345799999999999987653211
Q ss_pred -----h-------------------------------hCCCCccEEEEecCCCCCc-cccccCCCCCCEEEEEcCCCCCC
Q 007311 517 -----L-------------------------------KGEIDFRFAILCSGFALHS-AEFEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 517 -----~-------------------------------~~~~~l~~vIlisG~~~~~-~~~~~~~i~~PvL~i~G~~~~~D 559 (608)
. ....+++.+|.+.+..... ......++..|++++.|. .|
T Consensus 186 ~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s---~D 262 (365)
T COG4188 186 LLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGS---AD 262 (365)
T ss_pred HHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeeccc---cc
Confidence 0 0124577777777665432 234567899999999999 77
Q ss_pred cccchH-HHHHHHHHhccC-CcEEEEeCCCCc
Q 007311 560 RQVANQ-ASKELAKAFEEG-CSVIIEHDCGHI 589 (608)
Q Consensus 560 ~~Vp~~-~~~~l~~~~~~~-~~~vv~~~gGH~ 589 (608)
...|.. ...+....++.. .....+.++.|.
T Consensus 263 ~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~ 294 (365)
T COG4188 263 GFAPPVTEQIRPFGYLPGALKYLRLVPGATHF 294 (365)
T ss_pred ccCCcccccccccccCCcchhheeecCCCccc
Confidence 755543 233344455542 235556677886
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.015 Score=64.51 Aligned_cols=88 Identities=16% Similarity=0.264 Sum_probs=62.7
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-------ccccCCCCCCEEEEEcCCCCCCcccchHHH
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-------EFEHRSINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
..|+|+|||+.|+..++... +...+.++|.++ |+.... ++..-.++.|+|+|-|. +|...+....
T Consensus 252 IiLvGrsmGAlVachVSpsn----sdv~V~~vVCig-ypl~~vdgprgirDE~Lldmk~PVLFV~Gs---nd~mcspn~M 323 (784)
T KOG3253|consen 252 IILVGRSMGALVACHVSPSN----SDVEVDAVVCIG-YPLDTVDGPRGIRDEALLDMKQPVLFVIGS---NDHMCSPNSM 323 (784)
T ss_pred eEEEecccCceeeEEecccc----CCceEEEEEEec-ccccCCCcccCCcchhhHhcCCceEEEecC---CcccCCHHHH
Confidence 36899999988888877632 234477776665 333222 13345788999999999 8999999999
Q ss_pred HHHHHHhccCCcEEEEe-CCCCcCC
Q 007311 568 KELAKAFEEGCSVIIEH-DCGHIIP 591 (608)
Q Consensus 568 ~~l~~~~~~~~~~vv~~-~gGH~ip 591 (608)
+.+.+..... .++++. .++|.+-
T Consensus 324 E~vreKMqA~-~elhVI~~adhsma 347 (784)
T KOG3253|consen 324 EEVREKMQAE-VELHVIGGADHSMA 347 (784)
T ss_pred HHHHHHhhcc-ceEEEecCCCcccc
Confidence 9999888765 445444 4589753
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.006 Score=61.95 Aligned_cols=64 Identities=27% Similarity=0.383 Sum_probs=49.7
Q ss_pred CCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHhcc-CCcEEEEeCCCCcCCC--Ch---hhHHHHHHHHHHhC
Q 007311 542 RSIN-CPSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSVIIEHDCGHIIPT--RS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 542 ~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~-~~~~vv~~~gGH~ip~--~~---~~~~~i~~Fl~~~L 608 (608)
..+. +|+|++||. +|.+||...+..+.+.... ....++..+++|.... .+ ...+++.+|+.+.|
T Consensus 228 ~~i~~~P~l~~~G~---~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 228 EKISPRPVLLVHGE---RDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhcCCcceEEEecC---CCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 3445 899999998 8999999999999998887 4455556677898663 22 36788999998764
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0094 Score=67.80 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=90.7
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+...-.+||++|..++-.. .++++..- .-+|-++|++-.... .....+.||...
T Consensus 86 elsGIPVLFIPGNAGSyKQ----vRSiAS~a----~n~y~~~~~e~t~~~------------------d~~~~~DFFaVD 139 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQ----VRSIASVA----QNAYQGGPFEKTEDR------------------DNPFSFDFFAVD 139 (973)
T ss_pred cCCCceEEEecCCCCchHH----HHHHHHHH----hhhhcCCchhhhhcc------------------cCccccceEEEc
Confidence 3455679999998888754 44777653 336777776533110 012356787732
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCc-------eEEEecChhHHHHHHHHHHHhhhhCCC
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF-------DGILGFSQGAAMAASVCAQWERLKGEI 521 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~-------~~IlGFSQGa~vAl~la~~~~~~~~~~ 521 (608)
..+++ ..++..-.+.|++-.-+++.++......+.++ ++|+||||||+||..++.... ..+.
T Consensus 140 -----FnEe~----tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn--~~~~ 208 (973)
T KOG3724|consen 140 -----FNEEF----TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKN--EVQG 208 (973)
T ss_pred -----ccchh----hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhh--hccc
Confidence 12222 22333334566777777777777777662222 368999999999998876431 1133
Q ss_pred CccEEEEecCCC---CCccc--------------------cccC-CCCCCEEEEEcCCCCCCcccchHHH
Q 007311 522 DFRFAILCSGFA---LHSAE--------------------FEHR-SINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 522 ~l~~vIlisG~~---~~~~~--------------------~~~~-~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
.+.-+|..|... |...+ .+.. ...+-++-|.|.- .|.+||.+.+
T Consensus 209 sVntIITlssPH~a~Pl~~D~~l~~fy~~vnn~W~k~~~~~~~~~ls~V~vVSisGG~--~Dy~V~se~s 276 (973)
T KOG3724|consen 209 SVNTIITLSSPHAAPPLPLDRFLLRFYLLVNNYWNKLQNNNSDPLLSHVGVVSISGGI--RDYQVPSELS 276 (973)
T ss_pred hhhhhhhhcCcccCCCCCCcHHHHHHHHHHHHHHHHHHhccccchhcceEEEEEecCc--cccccCcchh
Confidence 444455555432 11111 0111 2334466677763 8999986543
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.017 Score=62.69 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=41.4
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE-E-EeCCCCc-----CCCChhhHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI-I-EHDCGHI-----IPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v-v-~~~gGH~-----ip~~~~~~~~i~~Fl~~~ 607 (608)
..+.+|+.+.+|. +|-.+.++..+++...+.+..... + ..+-.|. .-......+.|.+.++.+
T Consensus 329 ~~i~~P~~l~~g~---~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 329 TNIKVPTALYYGD---NDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred cccccCEEEEecC---CcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 4578999999999 899999999998877776642211 1 1223554 111234667777777643
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.036 Score=65.21 Aligned_cols=125 Identities=18% Similarity=0.140 Sum_probs=82.4
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------- 538 (608)
.+...+++++.+..-.+....+|+|+|-||-|++.++...+ ..-++..|++++..-...-
T Consensus 590 ~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~----~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~ 665 (755)
T KOG2100|consen 590 KDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP----GDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSEND 665 (755)
T ss_pred HHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc----CceEEEEEEecceeeeeeecccccHhhcCCCcccc
Confidence 34444555444443223445689999999999999888431 1335555777766533210
Q ss_pred ---------cccCCCCCCE-EEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEE-eCCCCcCCCCh---hhHHHHHH
Q 007311 539 ---------FEHRSINCPS-LHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIE-HDCGHIIPTRS---PYIDEIKS 602 (608)
Q Consensus 539 ---------~~~~~i~~Pv-L~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~-~~gGH~ip~~~---~~~~~i~~ 602 (608)
.....++.|. |++||+ .|..|+.+.+.++.+.+...+ ...++ .+-.|.+-... .....+..
T Consensus 666 ~~y~e~~~~~~~~~~~~~~~LliHGt---~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~ 742 (755)
T KOG2100|consen 666 KGYEESSVSSPANNIKTPKLLLIHGT---EDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDR 742 (755)
T ss_pred chhhhccccchhhhhccCCEEEEEcC---CcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHH
Confidence 1234567777 999999 899999999999999998643 33344 45699975543 35677888
Q ss_pred HHHH
Q 007311 603 FLQR 606 (608)
Q Consensus 603 Fl~~ 606 (608)
||..
T Consensus 743 ~~~~ 746 (755)
T KOG2100|consen 743 FLRD 746 (755)
T ss_pred HHHH
Confidence 8864
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.13 Score=53.06 Aligned_cols=178 Identities=24% Similarity=0.335 Sum_probs=98.6
Q ss_pred CCccEEEEecCCCCChHH-HHHHH--HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNASS-FKGRT--ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~-f~~~~--~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..||+||-.|-.|-|... |.+.+ ... +.+.+.+-++-|||| +.. . +
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m-~~i~~~f~i~Hi~aP--------Gqe-----~------------g----- 69 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDM-QEILQNFCIYHIDAP--------GQE-----E------------G----- 69 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHH-HHHHTTSEEEEEE-T--------TTS-----T------------T-----
T ss_pred CCCceEEEeccccccchHHHHHHhcchhH-HHHhhceEEEEEeCC--------CCC-----C------------C-----
Confidence 468999999999999987 76443 122 233356899999999 110 0 0
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
.+--+.+| +.+.+++..+.|..+++..+- ..+-+|=--||.|-+.+|+.+ +..+-|
T Consensus 70 ----------------a~~~p~~y--~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~-----p~~V~G 126 (283)
T PF03096_consen 70 ----------------AATLPEGY--QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKH-----PERVLG 126 (283)
T ss_dssp ---------------------TT-------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHS-----GGGEEE
T ss_pred ----------------cccccccc--cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccC-----ccceeE
Confidence 00001111 345677777778888877663 334467778888888888844 567899
Q ss_pred EEEecCCCCCcc--c-----------------------------------------------------------------
Q 007311 526 AILCSGFALHSA--E----------------------------------------------------------------- 538 (608)
Q Consensus 526 vIlisG~~~~~~--~----------------------------------------------------------------- 538 (608)
+|+++.-..... +
T Consensus 127 LiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~ 206 (283)
T PF03096_consen 127 LILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYN 206 (283)
T ss_dssp EEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999775442211 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.......||+|++.|+ .-+.+ +.+.++.+.+....+.++.- +.|=.+-.+.| ..+++.=||+.
T Consensus 207 ~R~DL~~~~~~~~c~vLlvvG~---~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 207 SRTDLSIERPSLGCPVLLVVGD---NSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp T-----SECTTCCS-EEEEEET---TSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred ccccchhhcCCCCCCeEEEEec---CCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 1234567999999998 55543 56778888888765666554 55554433222 45666666653
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=59.38 Aligned_cols=34 Identities=24% Similarity=0.110 Sum_probs=26.1
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCC-CCccEEEEecCC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGE-IDFRFAILCSGF 532 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~-~~l~~vIlisG~ 532 (608)
..++||||||.++=.++.+- .. ++++-+|.++|.
T Consensus 96 ~naIGfSQGGlflRa~ierc----~~~p~V~nlISlggp 130 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFC----DGGPPVYNYISLAGP 130 (314)
T ss_pred EEEEEEccchHHHHHHHHHC----CCCCCcceEEEecCC
Confidence 36999999999988777643 33 578888887765
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.02 Score=57.83 Aligned_cols=51 Identities=22% Similarity=0.202 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.+.+.+.+. .+.+...=..++|+||||.+|=.++.. +...+++-.|.++|.
T Consensus 77 v~~~ce~v~-~m~~lsqGynivg~SQGglv~Raliq~----cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 77 VDVACEKVK-QMPELSQGYNIVGYSQGGLVARALIQF----CDNPPVKNFISLGGP 127 (296)
T ss_pred HHHHHHHHh-cchhccCceEEEEEccccHHHHHHHHh----CCCCCcceeEeccCC
Confidence 334444444 333333334699999999998877764 334677777877764
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.048 Score=53.27 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=29.9
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEec
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFID 409 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~d 409 (608)
..+-|+++.|-|..-+.++|..+-..-..+-..+..+|+||
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PD 81 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPD 81 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCC
Confidence 35568999999999999999977644444434556677666
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.011 Score=66.15 Aligned_cols=57 Identities=23% Similarity=0.151 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...+++|+.+.|..- ...+.|+|+|.||.+++.++.... ....++++|+.||...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPD---SKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcc---hhHHHHHHhhhcCCcc
Confidence 46778899999998874 345679999999999988877421 2345888999998764
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.019 Score=59.05 Aligned_cols=52 Identities=13% Similarity=0.115 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 477 LDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
+.+.++.+.+.+.... .=..++||||||.+.=.++.+ +...+++-+|.++|.
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~----c~~~~V~nlISlggp 115 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQR----CNDPPVHNLISLGGP 115 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-----TSS-EEEEEEES--
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHH----CCCCCceeEEEecCc
Confidence 3444555555555432 223589999999988777765 335678889998865
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.042 Score=57.04 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=25.5
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCC-CCccEEEEecCC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGE-IDFRFAILCSGF 532 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~-~~l~~vIlisG~ 532 (608)
..++||||||.++=.++.+- .. ++++-+|.++|.
T Consensus 97 ~naIGfSQGglflRa~ierc----~~~p~V~nlISlggp 131 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFC----DNAPPVINYVSLGGP 131 (306)
T ss_pred eEEEEEcchhHHHHHHHHHC----CCCCCcceEEEecCC
Confidence 36899999999987777643 23 578888887754
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.11 Score=51.56 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=27.6
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
.+.|++||||-.+|..+.. ..+++..|+++|.+-+.
T Consensus 58 ~i~lvAWSmGVw~A~~~l~-------~~~~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQ-------GIPFKRAIAINGTPYPI 93 (213)
T ss_pred eEEEEEEeHHHHHHHHHhc-------cCCcceeEEEECCCCCc
Confidence 3479999999999887654 24678889998877554
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.093 Score=55.30 Aligned_cols=107 Identities=20% Similarity=0.130 Sum_probs=69.0
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc---------cc--------------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS---------AE-------------------------- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~---------~~-------------------------- 538 (608)
...|+|+||||.=|+.+|+.. +..++.+..+||...+. ..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~-----pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~ 227 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKH-----PDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLS 227 (316)
T ss_pred CceeEEEeccchhhhhhhhhC-----cchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchh
Confidence 347999999999999999954 46688888888877665 21
Q ss_pred -ccc--CC----------CCCCEEEEEcCCCCCCcccc--hHHHHHHHHHhccC--CcEEEEe-CCCCcCCCChhhHHHH
Q 007311 539 -FEH--RS----------INCPSLHIFGGDLGNDRQVA--NQASKELAKAFEEG--CSVIIEH-DCGHIIPTRSPYIDEI 600 (608)
Q Consensus 539 -~~~--~~----------i~~PvL~i~G~~~~~D~~Vp--~~~~~~l~~~~~~~--~~~vv~~-~gGH~ip~~~~~~~~i 600 (608)
.+. .. ...+.+.-.|. .|.... ....+.+.+.+... ...+..+ +++|....-...+.+.
T Consensus 228 ~~~~l~~~~~~~~~~~~~~~~~~~~d~g~---ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w~~~l~~~ 304 (316)
T COG0627 228 LIEKLVANANTRIWVYGGSPPELLIDNGP---ADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFWASQLADH 304 (316)
T ss_pred HHHHhhhcccccceecccCCCcccccccc---chhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHHHHHHHHH
Confidence 000 11 33445555776 676653 22345566666532 2444555 6689876666788888
Q ss_pred HHHHHHhC
Q 007311 601 KSFLQRFL 608 (608)
Q Consensus 601 ~~Fl~~~L 608 (608)
..|+...|
T Consensus 305 ~~~~a~~l 312 (316)
T COG0627 305 LPWLAGAL 312 (316)
T ss_pred HHHHHHHh
Confidence 88887653
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.026 Score=59.99 Aligned_cols=42 Identities=12% Similarity=-0.123 Sum_probs=30.3
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA 537 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~ 537 (608)
....|+|||+||-||-.++..... ...++.++.+-++.|...
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~---~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKG---GGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT------SSEEEEES-B-TTTT
T ss_pred hHEEEEeeccchhhhhhhhhhccC---cceeeEEEecCccccccc
Confidence 345799999999999999987642 357899999998887654
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.014 Score=58.30 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHH
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~ 512 (608)
..+..+++.+++...+..+-|+|||||++||-.+..
T Consensus 59 ~~~l~~fI~~Vl~~TGakVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 59 AKQLRAFIDAVLAYTGAKVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHHHHHHHHHHT--EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCEEEEEEcCCcCHHHHHHHH
Confidence 344455555555556666679999999999988876
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.036 Score=55.24 Aligned_cols=26 Identities=19% Similarity=0.379 Sum_probs=19.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK 400 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~ 400 (608)
+.+.|||+||+++|..+|. .+...+.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~----~~~~~l~ 28 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMR----YLKNHLE 28 (217)
T ss_pred CCEEEEEeCCCCCCHHHHH----HHHHHHH
Confidence 3467999999999999998 5544443
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.59 Score=47.09 Aligned_cols=46 Identities=15% Similarity=0.065 Sum_probs=38.1
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~ 593 (608)
.+-+-..+|+ +|..+|.+....+++.+++.+..+-+-+..|.+-..
T Consensus 242 ~d~l~Fyygt---~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~ 287 (301)
T KOG3975|consen 242 LDSLWFYYGT---NDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVK 287 (301)
T ss_pred CcEEEEEccC---CCCCcchHHHHHHhhhcchhceeeccccCCcceeec
Confidence 4556778999 899999999999999999877887777779986553
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=95.52 E-value=1 Score=46.53 Aligned_cols=112 Identities=24% Similarity=0.239 Sum_probs=69.1
Q ss_pred CCCCCCccEEEEecCCCCChHH-HHHHH--HHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccc
Q 007311 366 GIVCRRKLRILCLHGFRQNASS-FKGRT--ASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKR 441 (608)
Q Consensus 366 ~~~~~~~~~iLlLHG~G~na~~-f~~~~--~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (608)
+.....|++||-.|..|-|... |.+.+ ...+..+ .++-++-|++| ++..
T Consensus 40 Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~fcv~HV~~PGqe~g-------------------------- 92 (326)
T KOG2931|consen 40 GDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EHFCVYHVDAPGQEDG-------------------------- 92 (326)
T ss_pred cCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHH-hheEEEecCCCccccC--------------------------
Confidence 3333467889999999999977 66443 1222222 24888999988 1100
Q ss_pred eeeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCce-EEEecChhHHHHHHHHHHHhhhhCC
Q 007311 442 FAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFD-GILGFSQGAAMAASVCAQWERLKGE 520 (608)
Q Consensus 442 ~~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~-~IlGFSQGa~vAl~la~~~~~~~~~ 520 (608)
.+.+ +.+| +.+.+++..+.|..+++..+-.. +=+|---||.+-+.+|+ ..+
T Consensus 93 -----Ap~~----------------p~~y--~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl-----~hp 144 (326)
T KOG2931|consen 93 -----APSF----------------PEGY--PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFAL-----NHP 144 (326)
T ss_pred -----CccC----------------CCCC--CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHh-----cCh
Confidence 0000 0111 24567777777778877665432 23466677778888887 446
Q ss_pred CCccEEEEecCC
Q 007311 521 IDFRFAILCSGF 532 (608)
Q Consensus 521 ~~l~~vIlisG~ 532 (608)
.++-|+|+++.-
T Consensus 145 ~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 145 ERVLGLVLINCD 156 (326)
T ss_pred hheeEEEEEecC
Confidence 789999997744
|
|
| >PRK14429 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.031 Score=47.74 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-..| |=..+.|+.+++++|+++|+..|.++.++
T Consensus 16 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 70 (90)
T PRK14429 16 GCRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVGVPCTEVL 70 (90)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEEE
Confidence 3688999999999999999999999 99999999999999999999888776543
|
|
| >PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3 | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.037 Score=47.26 Aligned_cols=52 Identities=29% Similarity=0.364 Sum_probs=46.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCC
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEG 78 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~ 78 (608)
-+|.+.+..+.++||+|-|+=..+| |-+.+.|+.+.+++|+++|++.|..+.
T Consensus 18 gFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p~a~ 70 (91)
T PF00708_consen 18 GFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPPPAR 70 (91)
T ss_dssp SHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSSTTSE
T ss_pred ChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCCCcE
Confidence 4789999999999999999999999 999999999999999999999776653
|
6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A .... |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.071 Score=46.60 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC--ChhhHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT--RSPYIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~--~~~~~~~i~~Fl~~ 606 (608)
....|+|++.++ .|++.|.+.++++++.+.+. +.+...+.||.+-. ..-..+.+.+||..
T Consensus 32 ~~~~piL~l~~~---~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 32 PGAPPILVLGGT---HDPVTPYEGARAMAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCCEEEEecC---cCCCCcHHHHHHHHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 345999999999 99999999999999999973 55555666998752 23366777788863
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PRK14448 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.041 Score=46.98 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=49.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+.+++|+|-|+=-++| |-..+.|+.++++.|+++|++.|.++.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 69 (90)
T PRK14448 16 GFRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQHGPPTAVV 69 (90)
T ss_pred chHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHHhCCCceEE
Confidence 4789999999999999999999999 9999999999999999999988887644
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.18 Score=52.13 Aligned_cols=83 Identities=22% Similarity=0.238 Sum_probs=60.2
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
.|+|||.||+.++..... ..+|+..|++-+|.-+..+....+++-|+|.|.-+ |=+.+ +.-.-+++.+.
T Consensus 244 aViGHSFGgAT~i~~ss~------~t~FrcaI~lD~WM~Pl~~~~~~~arqP~~finv~----~fQ~~-en~~vmKki~~ 312 (399)
T KOG3847|consen 244 AVIGHSFGGATSIASSSS------HTDFRCAIALDAWMFPLDQLQYSQARQPTLFINVE----DFQWN-ENLLVMKKIES 312 (399)
T ss_pred hheeccccchhhhhhhcc------ccceeeeeeeeeeecccchhhhhhccCCeEEEEcc----cccch-hHHHHHHhhhC
Confidence 389999999988876652 45799999999999888777778999999999865 55543 44444555555
Q ss_pred c-CCcEEEEeCC-CCc
Q 007311 576 E-GCSVIIEHDC-GHI 589 (608)
Q Consensus 576 ~-~~~~vv~~~g-GH~ 589 (608)
+ ....+++.+| =|.
T Consensus 313 ~n~g~~~it~~GsVHq 328 (399)
T KOG3847|consen 313 QNEGNHVITLDGSVHQ 328 (399)
T ss_pred CCccceEEEEccceec
Confidence 3 2456666665 354
|
|
| >PRK14420 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.043 Score=46.90 Aligned_cols=53 Identities=23% Similarity=0.319 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+.+++|+|-|+=-..| |=..+.|+.+++++|+++|++.|.++.+
T Consensus 16 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~p~~a~V 69 (91)
T PRK14420 16 GFRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKGSPFSKV 69 (91)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhCCCCCEE
Confidence 3688999999999999999999999 9999999999999999999988877754
|
|
| >PRK14430 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.046 Score=46.87 Aligned_cols=53 Identities=23% Similarity=0.221 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+..|+|+|-|+=-+.| |-.-+.|+.++++.|+++|+..|.++.+
T Consensus 18 GFR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l~~gp~~a~V 71 (92)
T PRK14430 18 GYRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWMEAGPPAAQV 71 (92)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999888877644
|
|
| >COG1254 AcyP Acylphosphatases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.075 Score=45.52 Aligned_cols=52 Identities=23% Similarity=0.294 Sum_probs=48.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCC
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEG 78 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~ 78 (608)
.+|.+.+..+.+|||+|.|+-=..| |-+-+.|+.+++++|++||+..|.++.
T Consensus 18 GFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~~g~~~a~ 70 (92)
T COG1254 18 GFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLRKGPPAAK 70 (92)
T ss_pred cHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHHhCCCceE
Confidence 4789999999999999999999999 999999999999999999998777763
|
|
| >PRK14447 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.044 Score=47.27 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC--cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG--VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG--iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|+=-+.| |-+.+.|+.+++++|+++|++.|.++.++
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~~gp~~a~V~ 73 (95)
T PRK14447 18 FFRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWARVGPPGARVE 73 (95)
T ss_pred cchHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCeEEE
Confidence 4788999999999999999999999 99999999999999999999888777543
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.16 Score=47.32 Aligned_cols=65 Identities=17% Similarity=-0.044 Sum_probs=43.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcccc----ccCCCCCCEEEEEcCCCCCCccc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEF----EHRSINCPSLHIFGGDLGNDRQV 562 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~----~~~~i~~PvL~i~G~~~~~D~~V 562 (608)
...|.||||||+||..++....... ......++.+++..+..... ........+..++.. .|.+.
T Consensus 29 ~i~v~GHSlGg~lA~l~a~~~~~~~-~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~~---~D~v~ 97 (153)
T cd00741 29 KIHVTGHSLGGALAGLAGLDLRGRG-LGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVND---NDIVP 97 (153)
T ss_pred eEEEEEcCHHHHHHHHHHHHHHhcc-CCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEEC---CCccC
Confidence 3468999999999999998764211 23455677777766544321 233445678888888 67663
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK14449 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.06 Score=45.97 Aligned_cols=53 Identities=19% Similarity=0.195 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+++|+|-|+=-.+| |=..+.|+.+++++|+++|++.|.++.+
T Consensus 17 GFR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~~~~~a~V 70 (90)
T PRK14449 17 GLRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKTGLRWARV 70 (90)
T ss_pred ChHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999998766643
|
|
| >TIGR01244 conserved hypothetical protein TIGR01244 | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.078 Score=48.77 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=48.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccc-c---------CCCCccccCcccccCCCc-hHHH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGK-F---------RTPSVETLDPEIRQFSDL-PTWI 197 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh-~---------~g~~~~~l~~~~~~~~~~-~~~~ 197 (608)
+..++++++..+-+.+ =..|||.|...|.+.-. . .|.. .++.++.. ..+ ++.+
T Consensus 12 s~qlt~~d~~~L~~~G-------------iktVIdlR~~~E~~~~p~~~~~~~~a~~~gl~--y~~iPv~~-~~~~~~~v 75 (135)
T TIGR01244 12 SPQLTKADAAQAAQLG-------------FKTVINNRPDREEESQPDFAQIKAAAEAAGVT--YHHQPVTA-GDITPDDV 75 (135)
T ss_pred cCCCCHHHHHHHHHCC-------------CcEEEECCCCCCCCCCCCHHHHHHHHHHCCCe--EEEeecCC-CCCCHHHH
Confidence 5678999998875542 35799999987743210 0 1211 22222111 111 1222
Q ss_pred Hh---hhhhcCCCeEEEEcCCCccHHHHHHHHHh
Q 007311 198 DN---NAEQLQGKHVLMYCTGGIRCEMASAYVRS 228 (608)
Q Consensus 198 ~~---~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~ 228 (608)
.. ..+ ..+++|++||++|.|+..+.+++..
T Consensus 76 ~~f~~~~~-~~~~pvL~HC~sG~Rt~~l~al~~~ 108 (135)
T TIGR01244 76 ETFRAAIG-AAEGPVLAYCRSGTRSSLLWGFRQA 108 (135)
T ss_pred HHHHHHHH-hCCCCEEEEcCCChHHHHHHHHHHH
Confidence 22 122 2468999999999999988776554
|
No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria. |
| >PRK14422 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.062 Score=46.17 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=49.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-+.| |-.-+.|+.+++++|+++|++.|.++.++
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V~ 74 (93)
T PRK14422 20 GFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRGDDTPGRVD 74 (93)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999888877543
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.84 Score=48.15 Aligned_cols=129 Identities=22% Similarity=0.233 Sum_probs=70.3
Q ss_pred cHHHHHHHHHHHHhH--hC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe-cCCCCCccc-----------
Q 007311 476 GLDVSLAYLKTIFSQ--EG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC-SGFALHSAE----------- 538 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~--~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli-sG~~~~~~~----------- 538 (608)
++-.+.+.+.+.+.+ .| ...++.|||.||+|++.++. .+...+...++.+++- .++......
T Consensus 193 dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~-~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~~~ 271 (365)
T PF05677_consen 193 DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALK-KEVLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIGKL 271 (365)
T ss_pred HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHH-hcccccCCCeeEEEEecCCcchHHHHHHHHHHHHHHH
Confidence 344444444444432 22 23467899999999997443 3322333346644443 344433211
Q ss_pred ------------cccCCCCCCEEEEEcCCC----CCCcccchHHHHHHHHHhcc-CC------cE--EEEeCCCCcCCCC
Q 007311 539 ------------FEHRSINCPSLHIFGGDL----GNDRQVANQASKELAKAFEE-GC------SV--IIEHDCGHIIPTR 593 (608)
Q Consensus 539 ------------~~~~~i~~PvL~i~G~~~----~~D~~Vp~~~~~~l~~~~~~-~~------~~--vv~~~gGH~ip~~ 593 (608)
.....+.+|-+++|+... ..|..++.+.. ++..|.+ .. .. +-.+.-.|.-|..
T Consensus 272 l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~--lA~~~l~~~~~~~~~~~Ki~i~~~~l~H~~~L~ 349 (365)
T PF05677_consen 272 LIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENC--LAAAFLDPPTAEKLSGKKIPIGERLLLHNEPLD 349 (365)
T ss_pred HHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcchh--hHHHhcCCcccccccccceecccccccccccCC
Confidence 235678899999999821 11444433222 3333322 11 12 2233447888888
Q ss_pred hhhHHHHHHHHHHh
Q 007311 594 SPYIDEIKSFLQRF 607 (608)
Q Consensus 594 ~~~~~~i~~Fl~~~ 607 (608)
.+.++.++.-+.+.
T Consensus 350 ~~~~~~la~~I~~~ 363 (365)
T PF05677_consen 350 DETIQALAEHILDH 363 (365)
T ss_pred hHHHHHHHHHHHhh
Confidence 78888888877664
|
|
| >PRK14436 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.065 Score=45.86 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-.+| |-.-+.|+.++++.|+++|+..|.++.++
T Consensus 18 GFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 72 (91)
T PRK14436 18 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQGPPLARVT 72 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhhCCCceEEE
Confidence 4788999999999999999999999 99999999999999999999888776543
|
|
| >PRK14435 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.062 Score=45.89 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=48.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+++|+|-|+=-++| |-..+.|+.+++++|+++|++.|.++.+
T Consensus 16 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 69 (90)
T PRK14435 16 GFRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVAKGPPAAVV 69 (90)
T ss_pred CChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 3688899999999999999999999 9999999999999999999988887644
|
|
| >KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.069 Score=54.53 Aligned_cols=104 Identities=25% Similarity=0.210 Sum_probs=66.7
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEec--------CC-hhhhhccccCCCCccccCcccccC----CCchH--
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDA--------RN-LYETRIGKFRTPSVETLDPEIRQF----SDLPT-- 195 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDv--------Rn-~~E~~~Gh~~g~~~~~l~~~~~~~----~~~~~-- 195 (608)
-++++-+++++.+ .++++||. |+ ..||..-||+|+...-++.-...- ..+|.
T Consensus 6 iv~~~~v~~~~~~-------------~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e 72 (286)
T KOG1529|consen 6 IVSVKWVMENLGN-------------HGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAE 72 (286)
T ss_pred ccChHHHHHhCcC-------------CCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHH
Confidence 3566666776654 46889986 33 578888899996532222110000 12332
Q ss_pred HHHh---hhhhcCCCeEEEEcC--CCccHHHHHH-HHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 WIDN---NAEQLQGKHVLMYCT--GGIRCEMASA-YVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~~~~---~~~~~k~k~Iv~yCt--gGiR~~~a~~-~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+++ .+....+..+|+|-+ +|+-+.--+. .++-. |+++|+-|.||+.+|++.
T Consensus 73 ~Fa~y~~~lGi~n~d~vViYd~~~~Gm~~Asrv~W~fr~f--Gh~~VslL~GG~~~Wk~~ 130 (286)
T KOG1529|consen 73 HFAEYASRLGVDNGDHVVIYDRGDGGMFSASRVWWTFRVF--GHTKVSLLNGGFRAWKAA 130 (286)
T ss_pred HHHHHHHhcCCCCCCeEEEEcCCCcceeehhhHHHHHHHh--CccEEEEecCcHHHHHHc
Confidence 1121 234567889999999 8876554444 56654 999999999999999985
|
|
| >PRK14433 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.065 Score=45.46 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++..++|.|-|+=-++| |-..+.|+.+++++|+++|++.|.++.+
T Consensus 15 GFR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V 68 (87)
T PRK14433 15 GYRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLRRGPRHARV 68 (87)
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 3688999999999999999999999 9999999999999999999988887654
|
|
| >PRK14450 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.071 Score=45.62 Aligned_cols=54 Identities=24% Similarity=0.321 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC--cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG--VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG--iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-.+| |=.-+.|+.++++.|+++|++.|.++.++
T Consensus 16 GFR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~~gp~~a~V~ 71 (91)
T PRK14450 16 YFRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLRSGPPRAEVK 71 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCcEEE
Confidence 4788999999999999999999999 88899999999999999999888887543
|
|
| >PRK14426 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.063 Score=46.02 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=49.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhC-CCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSI-SLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~-~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-++| |-..+.|+.++++.|+++|++. |.++.++
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g~P~~a~V~ 73 (92)
T PRK14426 18 GFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLKEGGPRSARVD 73 (92)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHhcCCCCCeEEE
Confidence 4788999999999999999999999 9999999999999999999998 8876443
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.94 Score=45.47 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHH-Hhh-h--hCC-CCccEEEEecCCCCCcc---------
Q 007311 476 GLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQ-WER-L--KGE-IDFRFAILCSGFALHSA--------- 537 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~-~~~-~--~~~-~~l~~vIlisG~~~~~~--------- 537 (608)
++..+++.|.+.+.+.. +...+-.||.||...+..... .+. . ... ..++++|+-|+......
T Consensus 46 ~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~ 125 (240)
T PF05705_consen 46 RLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSA 125 (240)
T ss_pred chHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHH
Confidence 45566666666666532 245788999988877765442 221 1 112 33889998776532110
Q ss_pred ------------c---------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHH
Q 007311 538 ------------E---------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAK 572 (608)
Q Consensus 538 ------------~---------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~ 572 (608)
. .......+|-|.++++ .|.+++.+..++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~---~D~l~~~~~ve~~~~ 202 (240)
T PF05705_consen 126 ALPKSSPRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSK---ADPLIPWRDVEEHAE 202 (240)
T ss_pred HcCccchhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCC---CCcCcCHHHHHHHHH
Confidence 0 1233567999999999 899999999998887
Q ss_pred HhccCC--cEEEEeC-CCCcCCCC---hhhHHHHHHHH
Q 007311 573 AFEEGC--SVIIEHD-CGHIIPTR---SPYIDEIKSFL 604 (608)
Q Consensus 573 ~~~~~~--~~vv~~~-gGH~ip~~---~~~~~~i~~Fl 604 (608)
..+..+ +....|+ .+|.-... .+|.+++.+|+
T Consensus 203 ~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 203 EARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred HHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 776543 3344444 46653222 34777777764
|
|
| >PRK14445 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.064 Score=45.89 Aligned_cols=54 Identities=22% Similarity=0.321 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-..| |=..+.|+.+++++|+++|+..|.++.++
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~gP~~a~V~ 72 (91)
T PRK14445 18 GFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAERGPSRSSVT 72 (91)
T ss_pred CChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999888776543
|
|
| >PRK14451 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.068 Score=45.54 Aligned_cols=54 Identities=24% Similarity=0.159 Sum_probs=49.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-..| |-.-+.|+.+++++|+++|+..|.++.++
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 71 (89)
T PRK14451 17 WFRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQKGPLNARVD 71 (89)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCceEEE
Confidence 4788999999999999999999999 99999999999999999999888877543
|
|
| >PRK14428 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.071 Score=46.15 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=49.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-.+| |-..+.|+.+++++|+++|+..|.++.++
T Consensus 22 GFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~~gP~~a~V~ 76 (97)
T PRK14428 22 GFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLAIGPRWSEVS 76 (97)
T ss_pred cchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHhhCCCccEEE
Confidence 4788999999999999999999999 99999999999999999999888887543
|
|
| >PRK14440 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.075 Score=45.37 Aligned_cols=53 Identities=21% Similarity=0.317 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+..++|+|-|+=-..| |-..+.|+.++++.|+++|++.|.++.+
T Consensus 17 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 70 (90)
T PRK14440 17 GFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEV 70 (90)
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999988877644
|
|
| >PRK14427 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.08 Score=45.59 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+++|+|-|+=-.+| |=.-+.|+.+++++|+++|++.|.++.+
T Consensus 20 GFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~~p~~a~V 73 (94)
T PRK14427 20 GFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNSDRAPGRV 73 (94)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4688999999999999999999999 9999999999999999999988877644
|
|
| >PRK14432 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.083 Score=45.40 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeee-cchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVG-GKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~-g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|.|+=-..| |=.-+. |+.++++.|+++|+..|.++.++
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~gp~~a~V~ 71 (93)
T PRK14432 16 GFRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKNGNKYSNIE 71 (93)
T ss_pred eehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHhCCCccEEE
Confidence 3688999999999999999999999 999996 99999999999999988887543
|
|
| >PRK14421 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.083 Score=45.93 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=49.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-..| |-..+.|+.+++++|+++|++.|.++.++
T Consensus 18 GFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V~ 72 (99)
T PRK14421 18 GYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCRRGPSAARVD 72 (99)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999888887543
|
|
| >PRK14438 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.08 Score=45.29 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=49.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|+=-+.| |=..+.|+.+++++|+++|+..|.++.++
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 71 (91)
T PRK14438 17 AFRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWCHHGPSRARVS 71 (91)
T ss_pred CccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEEE
Confidence 4688999999999999999999999 99999999999999999999888877543
|
|
| >PRK14425 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.083 Score=45.50 Aligned_cols=53 Identities=21% Similarity=0.301 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.++||+|-|+=-..| |-..+.|+.++++.|+++|+..|.++.+
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~~gp~~a~V 73 (94)
T PRK14425 20 GFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFRRGPPGASV 73 (94)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999988877644
|
|
| >PRK14423 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.092 Score=45.02 Aligned_cols=53 Identities=19% Similarity=0.159 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+|+|+|-|+=-.+| |-..+.|+.++++.|+++|+..|.++.+
T Consensus 19 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 72 (92)
T PRK14423 19 YYRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEGSPAAVV 72 (92)
T ss_pred eehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999988887654
|
|
| >PRK14444 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.098 Score=44.85 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+|+|+|-|+=-.+| |-..+.|+.++++.|+++|+..|.++.++
T Consensus 18 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 72 (92)
T PRK14444 18 NFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYSGPSHARVE 72 (92)
T ss_pred CcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999878776443
|
|
| >PRK14424 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.11 Score=44.65 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+..++|+|-|+=-+.| |-..+.|+.++++.|+++|++.|.++.+
T Consensus 21 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~~gp~~a~V 74 (94)
T PRK14424 21 GFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLRHGPPAARV 74 (94)
T ss_pred chHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCCcEE
Confidence 5789999999999999999999999 9999999999999999999988877643
|
|
| >PRK14446 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.067 Score=45.47 Aligned_cols=53 Identities=21% Similarity=0.191 Sum_probs=48.4
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
+|.+-+.++.+++|+|.|+=.++| |-.-+.|+.++++.|+++|+..|.++.++
T Consensus 17 FR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~~gP~~a~V~ 70 (88)
T PRK14446 17 YRASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLWQGPPAATVA 70 (88)
T ss_pred EhHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHhhCCCceEEE
Confidence 678889999999999999999999 99999999999999999999888777543
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.62 Score=52.50 Aligned_cols=119 Identities=19% Similarity=0.138 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 478 DVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 478 ~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
-+.+++|.+...- +-.+++|-|+|-||.+++.+..+++ .-++ ++|+|.+--...
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P-----~Ifr--vAIAGapVT~W~~YDTgYTERYMg~P~~nE 783 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP-----NIFR--VAIAGAPVTDWRLYDTGYTERYMGYPDNNE 783 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc-----ceee--EEeccCcceeeeeecccchhhhcCCCccch
Confidence 3444555444321 1255689999999999999888543 3343 445554432221
Q ss_pred ------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCChh---hHHHH
Q 007311 539 ------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRSP---YIDEI 600 (608)
Q Consensus 539 ------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~~---~~~~i 600 (608)
.....-.-..|++||- -|.-|......+|.+.+-.. ..+++.++- -|.+-.... +-..+
T Consensus 784 ~gY~agSV~~~VeklpdepnRLlLvHGl---iDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rl 860 (867)
T KOG2281|consen 784 HGYGAGSVAGHVEKLPDEPNRLLLVHGL---IDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARL 860 (867)
T ss_pred hcccchhHHHHHhhCCCCCceEEEEecc---cccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHH
Confidence 1122233458999999 89999999999988877542 356666654 787644322 45678
Q ss_pred HHHHHH
Q 007311 601 KSFLQR 606 (608)
Q Consensus 601 ~~Fl~~ 606 (608)
+.||++
T Consensus 861 l~FlQ~ 866 (867)
T KOG2281|consen 861 LHFLQE 866 (867)
T ss_pred HHHHhh
Confidence 888875
|
|
| >PRK14452 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.13 Score=45.32 Aligned_cols=54 Identities=20% Similarity=0.104 Sum_probs=49.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|.=-..| |-.-+.|+.+++++|++++...|.++.++
T Consensus 34 GFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~gP~~A~V~ 88 (107)
T PRK14452 34 GFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERGPPGARVK 88 (107)
T ss_pred ChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcCCCCcEEE
Confidence 4789999999999999999999999 99999999999999999999988887543
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.21 Score=56.05 Aligned_cols=56 Identities=25% Similarity=0.182 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+...+++|+++.|..-| ..+.|+|+|-||+.+..++..- .....|+.+|+.||..
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP---SSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG---GGTTSBSEEEEES--T
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecc---cccccccccccccccc
Confidence 356788999999999864 3456999999999988877752 3356799999999953
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PRK14437 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.14 Score=45.28 Aligned_cols=54 Identities=17% Similarity=0.125 Sum_probs=49.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|+=-..| |=.-+.|+.+++++|+++|+..|.++.++
T Consensus 37 GFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~~gP~~a~V~ 91 (109)
T PRK14437 37 FFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAVS 91 (109)
T ss_pred CchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCceEEE
Confidence 5899999999999999999999999 99999999999999999999888877543
|
|
| >PRK14442 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.15 Score=43.59 Aligned_cols=54 Identities=17% Similarity=0.085 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|.=-..| |-..+.|+.++++.|+++|+..|.++.++
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 72 (91)
T PRK14442 18 GFRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLGRGPRHAEVS 72 (91)
T ss_pred cccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCeEEE
Confidence 4688889999999999999999999 99999999999999999999888887543
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.25 Score=51.11 Aligned_cols=99 Identities=17% Similarity=0.106 Sum_probs=64.0
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------cccCCCCCCEEEEEcCCCCCCc
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
+|.|.|+||.+|+..++++ +..|+-|+..||+.-.... .....-.. ..+..|.+ .+.
T Consensus 180 ~L~G~SlGG~vsL~agl~~-----Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~-~~l~~g~~--~~~ 251 (299)
T COG2382 180 VLAGDSLGGLVSLYAGLRH-----PERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDER-IVLTTGGE--EGD 251 (299)
T ss_pred EEeccccccHHHHHHHhcC-----chhhceeeccCCccccCccccccccchhhhhhhhhccCccce-EEeecCCc--ccc
Confidence 5899999999999999954 6789999999988654321 01112223 44445541 333
Q ss_pred ccchHHHHHHHHHhccCC--cEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEGC--SVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~--~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
.. ..-++|++.|.... ..+.+++|||-.-.-++.+.+...+|
T Consensus 252 ~~--~pNr~L~~~L~~~g~~~~yre~~GgHdw~~Wr~~l~~~L~~l 295 (299)
T COG2382 252 FL--RPNRALAAQLEKKGIPYYYREYPGGHDWAWWRPALAEGLQLL 295 (299)
T ss_pred cc--chhHHHHHHHHhcCCcceeeecCCCCchhHhHHHHHHHHHHh
Confidence 33 45677888887543 45667889999866555544444443
|
|
| >PRK14434 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.14 Score=43.96 Aligned_cols=53 Identities=17% Similarity=0.205 Sum_probs=47.1
Q ss_pred HHHHHHHHhHhcC-CeeEEEEccCC-cceeeecch-HhHHHHHHHHHhCCC-CCCcc
Q 007311 28 LFTFYESNCSQLG-LLGRVRLAPHG-VNVTVGGKL-SSLESHIDAVKSISL-FEGTD 80 (608)
Q Consensus 28 ~~~~~~~~~~~~~-l~Gri~ia~eG-iN~t~~g~~-~~~~~~~~~~~~~~~-f~~~~ 80 (608)
+|.+.+.++++|+ |+|.|+=-.+| |-.-+.|+. +++++|+++|++.|. ++.++
T Consensus 17 FR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~g~pp~a~V~ 73 (92)
T PRK14434 17 FRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRKGPSKWAKVT 73 (92)
T ss_pred EhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhcCCCCCEEEE
Confidence 6888999999999 99999999999 999999987 699999999998763 76543
|
|
| >PRK14441 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.19 Score=43.22 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+.+|+|+|-|+=-+.| |=.-+.|+.+.++.|+++|++.|.++.+
T Consensus 19 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 72 (93)
T PRK14441 19 AFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCHAGPPAARV 72 (93)
T ss_pred cchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999988877644
|
|
| >PRK14431 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.16 Score=43.23 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=47.1
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCC-CCCCc
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSIS-LFEGT 79 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~-~f~~~ 79 (608)
+|-+.+..+..++|+|-|+=-.+||-..+.|+.+++++|+++|+..| .++.+
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~g~p~~a~V 69 (89)
T PRK14431 17 FRYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIEGASPASNV 69 (89)
T ss_pred EhHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhcCCCCcEEE
Confidence 67788899999999999999999999999999999999999999876 56644
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.23 Score=55.91 Aligned_cols=58 Identities=21% Similarity=0.066 Sum_probs=35.4
Q ss_pred ccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 471 QQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 471 ~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
++-..++..++++|.+.==.......+-|+|.||.++...+-+++ .-|+.+|+=-|+.
T Consensus 527 qN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP-----dLF~avia~Vpfm 584 (712)
T KOG2237|consen 527 QNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP-----DLFGAVIAKVPFM 584 (712)
T ss_pred cccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc-----hHhhhhhhcCcce
Confidence 445666777777664431112344578999999999988776543 3345555544443
|
|
| >COG2603 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.11 Score=53.17 Aligned_cols=85 Identities=18% Similarity=0.303 Sum_probs=54.6
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccC--------------CCchHH--------------HHhhhhhcCCCe
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF--------------SDLPTW--------------IDNNAEQLQGKH 208 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~--------------~~~~~~--------------~~~~~~~~k~k~ 208 (608)
.+..|||||.+-||..|++++ ++|.+..+= .+.-.. ++.......+.+
T Consensus 14 ~~~~lid~rap~ef~~g~~~i----a~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~ask~f~e~~~ 89 (334)
T COG2603 14 ADTPLIDVRAPIEFENGAMPI----AINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEASKAFQEENP 89 (334)
T ss_pred cCCceeeccchHHHhcccchh----hhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 378899999999999999987 455432110 000000 000001134677
Q ss_pred EEEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 209 VLMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 209 Iv~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
+-++| +||-|+.-.+.||... .|+ .+--+.||..++.
T Consensus 90 ~Gi~c~rgg~rsk~v~~~l~~~-~g~-~~~r~iGGeKalr 127 (334)
T COG2603 90 VGILCARGGLRSKIVQKWLGYA-AGI-DYPRVIGGEKALR 127 (334)
T ss_pred cceeeccccchhHHHHHHHHHH-HHh-hhhhhhchHHHHH
Confidence 88889 7899999999999443 375 4556778888775
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.59 Score=42.39 Aligned_cols=38 Identities=26% Similarity=0.191 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHhh
Q 007311 479 VSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 479 ~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
+..+.|.+.+++..+ ...|.|||+||++|..+++....
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 444556665555543 34688999999999999987653
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.99 Score=45.10 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=42.2
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-----CCCcCCCChhhHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-----CGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-----gGH~ip~~~~~~~~i~~Fl~ 605 (608)
...++||++.+--. +|+..|......+.+.+.+...+....+ -||+=-.+.+.-....++|.
T Consensus 212 yaaVrtPi~~~~~~---DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 212 YAAVRTPITFSRAL---DDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred HHHhcCceeeeccC---CCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 35789999999998 8999999999999999987555544432 38873223332233344443
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.22 E-value=10 Score=38.85 Aligned_cols=57 Identities=16% Similarity=-0.019 Sum_probs=40.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcccc------ccCCC-CCCEEEEEcCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEF------EHRSI-NCPSLHIFGGD 555 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~------~~~~i-~~PvL~i~G~~ 555 (608)
..+|+|||+||.+++...+. .+.-|+..+++|+..-...+. ..... ..++++..|..
T Consensus 138 ~~~i~GhSlGGLfvl~aLL~-----~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~ 201 (264)
T COG2819 138 RTAIIGHSLGGLFVLFALLT-----YPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSG 201 (264)
T ss_pred cceeeeecchhHHHHHHHhc-----CcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEeccc
Confidence 35799999999999998884 356788899999887655431 11111 55677777774
|
|
| >PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.19 Score=44.59 Aligned_cols=85 Identities=13% Similarity=0.104 Sum_probs=39.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh-ccccC-------CCCccccCcccccCCCc-hHHHHh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR-IGKFR-------TPSVETLDPEIRQFSDL-PTWIDN 199 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~-~Gh~~-------g~~~~~l~~~~~~~~~~-~~~~~~ 199 (608)
+..++++++.++-+.+ =..||+.|...|-. ..... ......++.|+.. .++ ++.+..
T Consensus 12 s~Q~~~~d~~~la~~G-------------fktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~-~~~~~~~v~~ 77 (110)
T PF04273_consen 12 SGQPSPEDLAQLAAQG-------------FKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDG-GAITEEDVEA 77 (110)
T ss_dssp ECS--HHHHHHHHHCT---------------EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----T-TT--HHHHHH
T ss_pred CCCCCHHHHHHHHHCC-------------CcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCC-CCCCHHHHHH
Confidence 3468999999888764 34799999887632 11110 0011122222211 111 122222
Q ss_pred hhh--hcCCCeEEEEcCCCccHHHHHHHHH
Q 007311 200 NAE--QLQGKHVLMYCTGGIRCEMASAYVR 227 (608)
Q Consensus 200 ~~~--~~k~k~Iv~yCtgGiR~~~a~~~L~ 227 (608)
..+ ....++|++||++|.|+...-++-+
T Consensus 78 f~~~l~~~~~Pvl~hC~sG~Ra~~l~~l~~ 107 (110)
T PF04273_consen 78 FADALESLPKPVLAHCRSGTRASALWALAQ 107 (110)
T ss_dssp HHHHHHTTTTSEEEE-SCSHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCChhHHHHHHHHh
Confidence 211 1246799999999999976655443
|
; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B. |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.28 Score=53.89 Aligned_cols=57 Identities=25% Similarity=0.135 Sum_probs=43.0
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...+++|+++.|+.-| .-+.|+|.|-||+.++.+++.- ..+.-|+.+|+.||...
T Consensus 159 ~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P---~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 159 LDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVP---SAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCc---cchHHHHHHHHhCCCCC
Confidence 456678999999999864 2346999999999988877631 22345778899999886
|
|
| >KOG3360 consensus Acylphosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.42 Score=40.77 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=43.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS 72 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~ 72 (608)
.+|.+-+..|+.|||+|=|.=..|| |-|++.|+.+.++.+..||+.
T Consensus 22 ~fr~~t~~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~ 68 (98)
T KOG3360|consen 22 CFRKHTLDEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLT 68 (98)
T ss_pred hhhHHHHHHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 6788888999999999999999999 999999999999999999985
|
|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
Probab=91.45 E-value=1.4 Score=52.13 Aligned_cols=171 Identities=14% Similarity=0.166 Sum_probs=92.3
Q ss_pred cCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHh---CCCCCCcccccccCCCCCCCCccc
Q 007311 20 STIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKS---ISLFEGTDFKLASSDYPLNGKVAH 96 (608)
Q Consensus 20 ~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~---~~~f~~~~~k~~~~~~~~~~~~~~ 96 (608)
..|+-..-+|..+++-|+++.+-=-=|+.+.+.-+ -.+..-++.|+. |..|-..+ +.| .
T Consensus 174 ~~~~~l~~~r~~~~~~ce~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~d~~~pr~~------~~p------~ 235 (986)
T PLN02727 174 DKLPPLAIFRGEMKRCCESLHVALENYLTPDDDRS------LDVWRKLQRLKNVCYDAGFPRSD------DYP------C 235 (986)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhccCCCCCcc------hhHHHHHHHHHhhhhhcCCCCCC------CCC------C
Confidence 34555667899999999999877777788877644 234444556665 33443211 011 1
Q ss_pred cCCcccccee----eecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc
Q 007311 97 ECGFTSLSIR----IVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI 172 (608)
Q Consensus 97 ~~~F~~l~vr----~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~ 172 (608)
..-|+.+..- .+..++..... +. --.+.+++|+++..+.+.+ =-.||+.|...|- -
T Consensus 236 ~~~~~n~~~v~~~~~~~~~~~~~~~--~~----~~rsgQpspe~la~LA~~G-------------fKTIINLRpd~E~-~ 295 (986)
T PLN02727 236 HTLFANWNPVYLSTSKEDIDSKESE--AA----FWRGGQVTEEGLKWLLEKG-------------FKTIVDLRAEIVK-D 295 (986)
T ss_pred cccccccceeeecccccccccccce--ee----EEEeCCCCHHHHHHHHHCC-------------CeEEEECCCCCcC-C
Confidence 1235554332 12222222110 00 0136789999998877653 2469999998872 1
Q ss_pred cccC--------CCCccccCcccccCCC-chHHHHhhhhhc---CCCeEEEEcCCCccH--HHHHHHHHh
Q 007311 173 GKFR--------TPSVETLDPEIRQFSD-LPTWIDNNAEQL---QGKHVLMYCTGGIRC--EMASAYVRS 228 (608)
Q Consensus 173 Gh~~--------g~~~~~l~~~~~~~~~-~~~~~~~~~~~~---k~k~Iv~yCtgGiR~--~~a~~~L~~ 228 (608)
+... ...+..++.++..... -++.+++..+.. ..++|+|||.+|.|+ .+.|.||.-
T Consensus 296 q~~~~ee~eAae~~GL~yVhIPVs~~~apt~EqVe~fa~~l~~slpkPVLvHCKSGarRAGamvA~yl~~ 365 (986)
T PLN02727 296 NFYQAAVDDAISSGKIEVVKIPVEVRTAPSAEQVEKFASLVSDSSKKPIYLHSKEGVWRTSAMVSRWKQY 365 (986)
T ss_pred CchhHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHHHHHHhhcCCCEEEECCCCCchHHHHHHHHHHH
Confidence 1110 0112223333211111 123444433333 579999999999953 456667763
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.43 Score=47.89 Aligned_cols=59 Identities=22% Similarity=0.153 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
++....+++++.+++........|.|||.||.+|..+++.... ....++..++...|..
T Consensus 65 ~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~-~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 65 TPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDD-EIQDRISKVYSFDGPG 123 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccH-HHhhheeEEEEeeCCC
Confidence 5566889999999988766556899999999999999886321 1234677788777643
|
|
| >PRK14443 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.43 Score=41.03 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=47.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCC-CCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISL-FEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~-f~~~ 79 (608)
-+|.+.+..+.+++|+|-|+=-+.| |-.-+.|+.+.++.|+++|+..|. ++.+
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~g~p~~a~V 72 (93)
T PRK14443 18 GFRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKKGPSPGCRI 72 (93)
T ss_pred cCcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhcCCCCcEEE
Confidence 4688889999999999999999999 999999999999999999998764 6644
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.65 Score=46.58 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=33.6
Q ss_pred cccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhh
Q 007311 474 TDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
.++..+-.+.|.+.|.. .+..+.|+||||||.+|...+.+...
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred chHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 34667777778888876 55556899999999999998887653
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=91.05 E-value=0.38 Score=49.25 Aligned_cols=87 Identities=16% Similarity=0.190 Sum_probs=58.3
Q ss_pred CCCCcEEEecCChhhhh-----------ccccCCCCccccCcccccCCC-----c-hHHHHh---hhhhcCCCeEEEEcC
Q 007311 155 DDKKLVLLDARNLYETR-----------IGKFRTPSVETLDPEIRQFSD-----L-PTWIDN---NAEQLQGKHVLMYCT 214 (608)
Q Consensus 155 ~~~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~~~~~~-----~-~~~~~~---~~~~~k~k~Iv~yCt 214 (608)
+.+++..||.|...+|. -|||+| +++.|...+-. . +..++. ......+++|++-|.
T Consensus 169 ~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpG----a~n~P~~~~~~~~g~~k~~edl~~~f~~~~l~~~~p~~~sC~ 244 (286)
T KOG1529|consen 169 ATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPG----AINFPFDEVLDPDGFIKPAEDLKHLFAQKGLKLSKPVIVSCG 244 (286)
T ss_pred ccccceeeeccccccccccCCCCcccCcCccCCC----cccCChHHhcccccccCCHHHHHHHHHhcCcccCCCEEEeec
Confidence 34679999999998885 489999 44444322210 0 122222 123356899999999
Q ss_pred CCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 215 GGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 215 gGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
.|+.....+..|..- | .+|-...|+...|.-
T Consensus 245 ~Gisa~~i~~al~r~--g-~~~~lYdGS~~Ew~~ 275 (286)
T KOG1529|consen 245 TGISASIIALALERS--G-PDAKLYDGSWTEWAL 275 (286)
T ss_pred cchhHHHHHHHHHhc--C-CCcceecccHHHHhh
Confidence 999855555555544 7 789999999999975
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.27 Score=48.48 Aligned_cols=39 Identities=18% Similarity=0.317 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHH
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+..++.++-.+...+..|+ +|.|||||+++...++...
T Consensus 78 ~DV~~AF~~yL~~~n~GRPf-ILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 78 SDVRAAFDYYLANYNNGRPF-ILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHhcCCCCCE-EEEEeChHHHHHHHHHHHH
Confidence 34444444433333323355 8999999999999998754
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.82 E-value=2 Score=45.62 Aligned_cols=54 Identities=15% Similarity=0.025 Sum_probs=33.5
Q ss_pred HHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhh---CCCCccEEEEecCCC
Q 007311 480 SLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLK---GEIDFRFAILCSGFA 533 (608)
Q Consensus 480 s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~---~~~~l~~vIlisG~~ 533 (608)
+++.+.+.|.... ..+.|++||||.-+++.+..+..... -...++=+|+.+.-.
T Consensus 176 aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 176 ALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 3444444444443 44579999999999999887654311 124566677766543
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.45 Score=52.54 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=31.2
Q ss_pred HHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 483 YLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 483 ~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.+.+..+.. +..+.|+||||||.+++.++.+.++.. ..-++.+|.+++.
T Consensus 151 lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~-~k~I~~~I~la~P 200 (440)
T PLN02733 151 KLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVF-EKYVNSWIAIAAP 200 (440)
T ss_pred HHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhH-HhHhccEEEECCC
Confidence 333343333 345689999999999999887543211 2346777777653
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=90.49 E-value=0.33 Score=46.89 Aligned_cols=60 Identities=12% Similarity=0.065 Sum_probs=38.4
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHH--HhhhhCCCCccEEEEecCCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQ--WERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~--~~~~~~~~~l~~vIlisG~~~ 534 (608)
..+..+..+.+.+...+-. ...+|+||||||+++..++.. ... ....++.++|+++-...
T Consensus 61 ~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~-~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPP-DVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSH-HHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCCh-hhhhhEEEEEEecCCcc
Confidence 3455566666665555543 356899999999999998876 110 11245788888876543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PRK14439 acylphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.09 E-value=0.62 Score=43.86 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=46.2
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh-CCCCCC
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS-ISLFEG 78 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~-~~~f~~ 78 (608)
+|.+.+..+.++||+|-|.=-++| |-..+.|+.++++.|+++|++ .|.++.
T Consensus 90 FR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~~gPp~A~ 142 (163)
T PRK14439 90 FRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSAR 142 (163)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCCeE
Confidence 578889999999999999999999 999999999999999999998 466653
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=88.86 E-value=1.7 Score=35.98 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=30.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAP 411 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP 411 (608)
.+.+|+++||++.....|. .+++.|. .++.++..|.+
T Consensus 15 ~k~~v~i~HG~~eh~~ry~----~~a~~L~~~G~~V~~~D~r 52 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYA----HLAEFLAEQGYAVFAYDHR 52 (79)
T ss_pred CCEEEEEeCCcHHHHHHHH----HHHHHHHhCCCEEEEECCC
Confidence 5778999999999998888 6667665 58999999866
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=88.45 E-value=1.4 Score=43.82 Aligned_cols=33 Identities=24% Similarity=0.157 Sum_probs=22.7
Q ss_pred HHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 483 YLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 483 ~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.+.+.+.+.. ....+.|||+||++|..++....
T Consensus 117 ~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 117 ELKSALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 3344444333 23468899999999999998654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=87.80 E-value=19 Score=39.08 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=48.7
Q ss_pred ceEEEecChhHHHHHHHHHHHh-----h------hhCCCCccEEEEecCCCCCcccc------ccCCCC-CCEEEEEcCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWE-----R------LKGEIDFRFAILCSGFALHSAEF------EHRSIN-CPSLHIFGGD 555 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~-----~------~~~~~~l~~vIlisG~~~~~~~~------~~~~i~-~PvL~i~G~~ 555 (608)
...++||||||=+-=.+.-+.. + +.-...-.|=|.+.||.....+. +..++. .-+.-|+|.
T Consensus 327 ~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~- 405 (456)
T COG3946 327 RVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGAGDVVPDIAKLPLARVQCIYGQ- 405 (456)
T ss_pred eEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCCCCcchhhhhCCcceeEEEecC-
Confidence 3469999999965433222211 0 01123344556677776554332 122333 347778998
Q ss_pred CCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC
Q 007311 556 LGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT 592 (608)
Q Consensus 556 ~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~ 592 (608)
+.+|...|. ++.....++..+|||++-.
T Consensus 406 ~e~d~~Cp~---------l~~~~~~~v~lpGgHHFd~ 433 (456)
T COG3946 406 EEKDTACPS---------LKAKGVDTVKLPGGHHFDG 433 (456)
T ss_pred ccccccCCc---------chhhcceeEecCCCcccCc
Confidence 334554541 1222377788899999955
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.58 E-value=1.9 Score=45.90 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 476 GLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.-++..+++.+.+...+ ....++||||||.++..++.... +...++.++.+++.-
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~---~~~~V~~~~tl~tp~ 164 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLG---GANRVASVVTLGTPH 164 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcC---ccceEEEEEEeccCC
Confidence 34556666777776664 45579999999999997776442 225677777777654
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=87.20 E-value=12 Score=41.72 Aligned_cols=47 Identities=21% Similarity=0.417 Sum_probs=31.9
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHH-HHHHhcc-------C-CcEEEEeC-CCCc
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKE-LAKAFEE-------G-CSVIIEHD-CGHI 589 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~-l~~~~~~-------~-~~~vv~~~-gGH~ 589 (608)
.+..|++|++++.|. .|.+.|++.+-. +.+.+.+ + +.....|+ .||.
T Consensus 292 DLr~Ir~Piivfas~---gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASY---GDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEecc---CCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 356899999999999 799999887754 2233332 1 23445566 4995
|
Their function is unknown. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.77 E-value=3.4 Score=46.78 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=26.8
Q ss_pred ccHHHHHHHHHHHH--------hHhCC-ceEEEecChhHHHHHHHHHHHh
Q 007311 475 DGLDVSLAYLKTIF--------SQEGP-FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 475 ~~l~~s~~~L~~~i--------~~~~~-~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.|+-.++.+|.+.+ ..... ...|.|||+||++|+.++....
T Consensus 224 ~Gml~AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 224 CGMVAAARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHh
Confidence 35555555554433 33333 3468899999999999987653
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=86.66 E-value=0.79 Score=49.88 Aligned_cols=44 Identities=11% Similarity=-0.024 Sum_probs=31.9
Q ss_pred HhCCceEEEecChhHHHHHHHHHHHhhhh-CCCCccEEEEecCCC
Q 007311 490 QEGPFDGILGFSQGAAMAASVCAQWERLK-GEIDFRFAILCSGFA 533 (608)
Q Consensus 490 ~~~~~~~IlGFSQGa~vAl~la~~~~~~~-~~~~l~~vIlisG~~ 533 (608)
..+..+.|+||||||.++..+........ ....++.+|.+++..
T Consensus 116 ~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 116 KNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 34666689999999999999887653210 134588999988754
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PRK14890 putative Zn-ribbon RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=86.43 E-value=0.53 Score=36.54 Aligned_cols=44 Identities=23% Similarity=0.733 Sum_probs=35.7
Q ss_pred ccccCCCCccc---cccCCCCCccccce-EEeCccccccccccccchhh
Q 007311 278 GSCLLCSSSFD---DYSSRCRCTHCRML-VLVCDTCRMEGAQYVCELCR 322 (608)
Q Consensus 278 ~~C~~C~~~~~---~~~~~c~~~~C~~l-~l~C~~C~~~~~~~~c~~c~ 322 (608)
-.|..|+.+.. .+. .-.|+.|... +.-|..|++.+..|.|+.|-
T Consensus 8 ~~CtSCg~~i~~~~~~~-~F~CPnCG~~~I~RC~~CRk~~~~Y~CP~CG 55 (59)
T PRK14890 8 PKCTSCGIEIAPREKAV-KFLCPNCGEVIIYRCEKCRKQSNPYTCPKCG 55 (59)
T ss_pred ccccCCCCcccCCCccC-EeeCCCCCCeeEeechhHHhcCCceECCCCC
Confidence 47999997653 343 5678999877 88999999999999999884
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.29 E-value=2.2 Score=48.53 Aligned_cols=109 Identities=16% Similarity=0.015 Sum_probs=66.5
Q ss_pred ccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------
Q 007311 473 QTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------- 538 (608)
-..++-++.++|.+.=-......+++|=|-||++...++-+. +..|+++|+-.+|......
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~-----P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~ 581 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA-----PDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWD 581 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC-----hhhhhheeecCCccchhhhhcCCCCCCCccchh
Confidence 345566666655443111234557899999999988888744 4568899987777543211
Q ss_pred ---------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc----cCCcEEEE--eCCCCc
Q 007311 539 ---------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE----EGCSVIIE--HDCGHI 589 (608)
Q Consensus 539 ---------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~----~~~~~vv~--~~gGH~ 589 (608)
....+--.|+|.+.|- .|+.|......++...+. +....+.. .++||.
T Consensus 582 EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl---~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHg 656 (682)
T COG1770 582 EWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGL---NDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHG 656 (682)
T ss_pred hhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccc---cCCccccchHHHHHHHHhhcccCCCcEEEEecccccCC
Confidence 1123444678888888 899987755554444333 32233333 567995
|
|
| >COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=86.11 E-value=0.37 Score=37.33 Aligned_cols=45 Identities=24% Similarity=0.699 Sum_probs=37.6
Q ss_pred cccccCCCCcc---ccccCCCCCcccc-ceEEeCccccccccccccchhh
Q 007311 277 MGSCLLCSSSF---DDYSSRCRCTHCR-MLVLVCDTCRMEGAQYVCELCR 322 (608)
Q Consensus 277 ~~~C~~C~~~~---~~~~~~c~~~~C~-~l~l~C~~C~~~~~~~~c~~c~ 322 (608)
...|..||... ..|+ .-.|+.|. ..+.-|..|++.++.|.|+.|-
T Consensus 9 ~~~CtSCg~~i~p~e~~v-~F~CPnCGe~~I~Rc~~CRk~g~~Y~Cp~CG 57 (61)
T COG2888 9 PPVCTSCGREIAPGETAV-KFPCPNCGEVEIYRCAKCRKLGNPYRCPKCG 57 (61)
T ss_pred CceeccCCCEeccCCcee-EeeCCCCCceeeehhhhHHHcCCceECCCcC
Confidence 56899999754 5565 57789999 8899999999999999999884
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=84.98 E-value=3.9 Score=43.91 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=25.6
Q ss_pred HHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHHh
Q 007311 480 SLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 480 s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~~ 515 (608)
..+.|.+++++... ...|.|||+||++|+..|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34455566655432 2478999999999999998664
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.98 E-value=6.9 Score=41.82 Aligned_cols=89 Identities=18% Similarity=0.293 Sum_probs=55.8
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccC----------CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccce
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKN----------IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRF 442 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~----------~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (608)
..||++|||-+|-.+|. .+...|.. .++||.|.-| +|
T Consensus 153 ~PlLl~HGwPGsv~EFy----kfIPlLT~p~~hg~~~d~~FEVI~PSlP-----------------------------Gy 199 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFY----KFIPLLTDPKRHGNESDYAFEVIAPSLP-----------------------------GY 199 (469)
T ss_pred cceEEecCCCchHHHHH----hhhhhhcCccccCCccceeEEEeccCCC-----------------------------Cc
Confidence 34899999999999999 66666642 1344544333 77
Q ss_pred eeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhh
Q 007311 443 AWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 443 ~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
.|-+.+.. ..| +..+...-+.+++-+.+ ...-|-|=-.|+.++..+|.+++.
T Consensus 200 gwSd~~sk------------~GF----------n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 200 GWSDAPSK------------TGF----------NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred ccCcCCcc------------CCc----------cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch
Confidence 88663321 112 22334445556665555 222466777999999999988754
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=83.43 E-value=3.1 Score=45.29 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHHh
Q 007311 478 DVSLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~~ 515 (608)
++.+..|.+++++... .+.|.|||+||+||+..|....
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~ 250 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIV 250 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHH
Confidence 3445555666655432 2568999999999999997653
|
|
| >cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
Probab=83.39 E-value=3.1 Score=37.54 Aligned_cols=25 Identities=32% Similarity=0.638 Sum_probs=18.8
Q ss_pred CCCeEEEEcCCCc-cHHH-HHHHHHhc
Q 007311 205 QGKHVLMYCTGGI-RCEM-ASAYVRSK 229 (608)
Q Consensus 205 k~k~Iv~yCtgGi-R~~~-a~~~L~~~ 229 (608)
.+++|+++|+.|. ||.. +++||...
T Consensus 80 ~~~~vlVHC~~G~~Rs~~~~~~~l~~~ 106 (139)
T cd00127 80 KGGKVLVHCLAGVSRSATLVIAYLMKT 106 (139)
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 5789999999997 8874 45566543
|
Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=83.22 E-value=2.9 Score=46.55 Aligned_cols=59 Identities=15% Similarity=0.076 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhh--h---CCCCccEEEEecCCCCCc
Q 007311 478 DVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERL--K---GEIDFRFAILCSGFALHS 536 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~--~---~~~~l~~vIlisG~~~~~ 536 (608)
++.++.|..++.+.. ....|+|+|+||..+-.+|....+. . ....++|+++-.|+..+.
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 334444444444322 2237999999999998888765421 1 136799999988887554
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.62 E-value=2.4 Score=48.04 Aligned_cols=55 Identities=25% Similarity=0.183 Sum_probs=38.7
Q ss_pred cHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 476 GLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
+...+++|+++.|..-+ ..+.|+|+|.||+.+..++..-. ....+..+|.+||..
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~---s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPH---SRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHh---hHHHHHHHHhhcccc
Confidence 56788999999998753 34569999999999988776321 113355566666653
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=80.38 E-value=2.4 Score=46.20 Aligned_cols=38 Identities=24% Similarity=0.146 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHHh
Q 007311 478 DVSLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~~ 515 (608)
++.+..|.++++.... ...|.|||+||+||+..|....
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHH
Confidence 4455666666665432 3478999999999999998653
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.30 E-value=45 Score=35.74 Aligned_cols=60 Identities=15% Similarity=0.294 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE--EEe-CCCCcC---CCChhhHHHHHHHHHHh
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI--IEH-DCGHII---PTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v--v~~-~gGH~i---p~~~~~~~~i~~Fl~~~ 607 (608)
..+.+.+++. .|.++|....++..+...+.+..+ +.+ ++-|.. -....+.++..+|++..
T Consensus 225 ~~~~ly~~s~---~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSD---NDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCC---ccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 6788899988 899999999999877776543333 333 344442 11225899999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 608 | ||||
| 4f67_A | 265 | Three Dimensional Structure Of The Double Mutant Of | 5e-27 | ||
| 1ycd_A | 243 | Crystal Structure Of Yeast Fsh1/yhr049w, A Member O | 3e-08 |
| >pdb|4F67|A Chain A, Three Dimensional Structure Of The Double Mutant Of Upf0176 Protein Lpg2838 From Legionella Pneumophila At The Resolution 1.8a, Northeast Structural Genomics Consortium (Nesg) Target Lgr82 Length = 265 | Back alignment and structure |
|
| >pdb|1YCD|A Chain A, Crystal Structure Of Yeast Fsh1/yhr049w, A Member Of The Serine Hydrolase Family Length = 243 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 608 | |||
| 4f67_A | 265 | UPF0176 protein LPG2838; structural genomics, PSI- | 1e-72 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 1e-45 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 7e-10 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 2e-09 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 6e-09 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 9e-09 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 3e-08 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 8e-08 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 4e-06 | |
| 1gmx_A | 108 | GLPE protein; transferase, rhodanese, sulfurtransf | 7e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1qxn_A | 137 | SUD, sulfide dehydrogenase; polysulfide-sulfur tra | 1e-05 | |
| 3d1p_A | 139 | Putative thiosulfate sulfurtransferase YOR285W; at | 3e-05 | |
| 1vee_A | 134 | Proline-rich protein family; hypothetical protein, | 4e-05 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 5e-05 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 6e-05 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 1e-04 | |
| 3hix_A | 106 | ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q | 2e-04 | |
| 1c25_A | 161 | CDC25A; hydrolase, cell cycle phosphatase,dual spe | 3e-04 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 3e-04 | |
| 3ilm_A | 141 | ALR3790 protein; rhodanese-like, NSR437H, NESG, st | 4e-04 | |
| 3i2v_A | 127 | Adenylyltransferase and sulfurtransferase MOCS3; r | 7e-04 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 9e-04 |
| >4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp} Length = 265 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 1e-72
Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 1 MSGDNQSQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKL 60
+ + + +YK+ + D SL + ++G+ G + LA GVN G
Sbjct: 5 HHHHSHMVKDIIIASFYKFIPLNDFRSLREPILTKMHEIGIKGTIILAHEGVNGGFAGNR 64
Query: 61 SSLESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVTFSSHPLL 120
+ D ++S S F FK + F +++ KE+VT +
Sbjct: 65 EQMNVFYDYLRSDSRFADLHFKETYDNKN---------PFDKAKVKLRKEIVTMG-VQKV 114
Query: 121 NPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSV 180
+P NAG +LS E+H + D ++LLD RN YE +G F+
Sbjct: 115 DP--SYNAGTYLSPEEWHQFI-------------QDPNVILLDTRNDYEYELGTFK---- 155
Query: 181 ETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLY 240
++P+I F + P ++ N + K + M+CTGGIRCE +AY++ GFE+V+QL+
Sbjct: 156 NAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGIRCEKTTAYMKEL--GFEHVYQLH 213
Query: 241 GGIQRYLEQFP-DGGFFKGKNFVFDHRISVG 270
GI YLE P ++GK FVFD R++V
Sbjct: 214 DGILNYLESIPESESLWEGKCFVFDDRVAVD 244
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} Length = 243 | Back alignment and structure |
|---|
Score = 161 bits (407), Expect = 1e-45
Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 53/263 (20%)
Query: 371 RKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQN 429
+ ++L LHGF QN F +++ + K L K + +IDAP L +
Sbjct: 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQ 63
Query: 430 GPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS 489
N R ++ H + L +
Sbjct: 64 ATLDADVN---RAWFY----------------------HSEISHELDISEGLKSVVDHIK 98
Query: 490 QEGPFDGILGFSQGAAMAASVCAQWER-LKGEIDFRFAILCSGFALHSAE---------- 538
GP+DGI+G SQGAA+++ + + + F+ +++ SG++ +
Sbjct: 99 ANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRIT 158
Query: 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS------VIIEHD 585
+ + I+G +D+ V + SK L + + + + EH
Sbjct: 159 EKFRDSFAVKPDMKTKMIFIYG---ASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHP 215
Query: 586 CGHIIPTRSPYIDEIKSFLQRFL 608
GH++P + I I + L
Sbjct: 216 GGHMVPNKKDIIRPIVEQITSSL 238
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} Length = 209 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 7e-10
Identities = 32/241 (13%), Positives = 63/241 (26%), Gaps = 63/241 (26%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
+L LH + +A+ + + I + +
Sbjct: 19 LLLLHSTGGDEHQL----VEIAEMIAPSHPILSIRGRINEQGVNR--------------- 59
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF 494
+F G F + + LD +L S
Sbjct: 60 ---------YF------------KLRGLGGFTKENFDL--ESLDEETDWLTDEVSLLAEK 96
Query: 495 DGI-------LGFSQGAAMAASVCAQW-ERLKGEIDFRFAILCSGFALHSAEFEHRSINC 546
+ +G+S GA +A ++ + I G + ++
Sbjct: 97 HDLDVHKMIAIGYSNGANVALNMFLRGKINFDK------IIAFHGM-QLEDFEQTVQLDD 149
Query: 547 PSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSV-IIEHDCGHIIPTRSPYIDEIKSFL 604
+ + ND V + +L E+ GC + I E GH + + K +L
Sbjct: 150 KHVFLSYAP--NDMIVPQKNFGDLKGDLEDSGCQLEIYESSLGHQLT--QEEVLAAKKWL 205
Query: 605 Q 605
Sbjct: 206 T 206
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* Length = 226 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 42/245 (17%), Positives = 75/245 (30%), Gaps = 56/245 (22%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
I+ LHG + + FK +L L + F+ AP + T N G P
Sbjct: 27 IIWLHGLGADRTDFKPVAEALQMVLPSTR-FILPQAPSQAV----TVN------GGWVMP 75
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF 494
+W+ D D L+ S + + ++
Sbjct: 76 --------SWY----------------DILAFSPARAIDEDQLNASADQVIALIDEQRAK 111
Query: 495 D------GILGFSQGAAMA--ASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINC 546
+ GFSQG A+ + + L G + S +A + +
Sbjct: 112 GIAAERIILAGFSQGGAVVLHTAFRRYAQPLGG------VLALSTYAPTFDDLALDERHK 165
Query: 547 -PSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSVI-IEHDCGHIIPTRSPYIDEIKSF 603
+ G D V + A + G V ++ GH + I +I ++
Sbjct: 166 RIPVLHLHGS--QDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVSLEE--IHDIGAW 221
Query: 604 LQRFL 608
L++ L
Sbjct: 222 LRKRL 226
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 6e-09
Identities = 38/237 (16%), Positives = 70/237 (29%), Gaps = 56/237 (23%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
+ LHG + + F +L + + S + +
Sbjct: 65 FVLLHGTGGDENQF----FDFGARL-----------LPQATIL-------SPVGDVSEHG 102
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF 494
+F + +G +D ++ T + + + +
Sbjct: 103 ------AARFF------------RRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVI 144
Query: 495 DGILGFSQGAAMAASVCAQW-ERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFG 553
LGFS GA + A+V + E A+L + L G
Sbjct: 145 --GLGFSNGANILANVLIEQPELFDA------AVLMHPLIPFEPKISPAKPTRRVLITAG 196
Query: 554 GDLGNDRQVANQASKELAKAFEE-GCSV-IIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
D Q +K L ++ + G +V + H GH I S ID ++ FL +
Sbjct: 197 ---ERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR--SGEIDAVRGFLAAYG 248
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 Length = 226 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 9e-09
Identities = 43/234 (18%), Positives = 82/234 (35%), Gaps = 52/234 (22%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
+L LHG N LA+ + + A + + V++NG
Sbjct: 41 LLLLHGTGGNELDL----LPLAEIVDSEASVLSVRGN--------------VLENG---- 78
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF 494
+F +LA+G FD +T L+ L + +
Sbjct: 79 ------MPRFF------------RRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNN 120
Query: 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554
+G+S GA +AAS+ +E + A+L + + ++ S+ I G
Sbjct: 121 IVAIGYSNGANIAASLLFHYENA-----LKGAVLHHPM-VPRRGMQLANLAGKSVFIAAG 174
Query: 555 DLGNDRQVANQASKELAKAFEE-GCSV-IIEHDCGHIIPTRSPYIDEIKSFLQR 606
ND ++ S+EL E +V + + GH + +++ K + +
Sbjct: 175 T--NDPICSSAESEELKVLLENANANVTMHWENRGHQLT--MGEVEKAKEWYDK 224
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* Length = 218 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 3e-08
Identities = 44/245 (17%), Positives = 73/245 (29%), Gaps = 55/245 (22%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
++ LHG + F +L + L FV AP T N G P
Sbjct: 17 VIWLHGLGADRYDFMPVAEALQESLLTTR-FVLPQAP----TRPVTIN------GGYEMP 65
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF 494
+W+ S R + L+VS + + +
Sbjct: 66 --------SWYDIKAMSPARS----------------ISLEELEVSAKMVTDLIEAQKRT 101
Query: 495 DG------ILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPS 548
+ GFSQG A+ + + I S +A + S +
Sbjct: 102 GIDASRIFLAGFSQGGAVVFHTAF----INWQGPLGGVIALSTYAPTFGDELELSASQQR 157
Query: 549 LHIFG--GDLGNDRQVANQASKELAKAFEE-GCSVI-IEHDCGHIIPTRSPY-IDEIKSF 603
+ G D V N + + + G +V E+ GH + P I +I ++
Sbjct: 158 IPALCLHGQ--YDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEV---LPQEIHDIGAW 212
Query: 604 LQRFL 608
L L
Sbjct: 213 LAARL 217
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 Length = 223 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 8e-08
Identities = 31/234 (13%), Positives = 54/234 (23%), Gaps = 53/234 (22%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
+ LHG + ++ LA+++ A V ++
Sbjct: 33 LFLLHGSGVDETTL----VPLARRIAPTATLVAARGRIPQEDGFR--------------- 73
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF 494
WF + + F+ +T
Sbjct: 74 ---------WF---ER---------IDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDH 112
Query: 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554
LG+S GA + +S+ L R A L + + I G
Sbjct: 113 ATFLGYSNGANLVSSLM-----LLHPGIVRLAALLRPMPV-LDHVPATDLAGIRTLIIAG 166
Query: 555 DLGNDRQVANQASKELAKAFEE-GCSV-IIEHDCGHIIPTRSPYIDEIKSFLQR 606
D + L G V GH I ++ +L
Sbjct: 167 A--AD-ETYGPFVPALVTLLSRHGAEVDARIIPSGHDIGDPD--AAIVRQWLAG 215
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 Length = 232 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 4e-06
Identities = 45/252 (17%), Positives = 74/252 (29%), Gaps = 67/252 (26%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
++ LHG + A + + +I ++ AP T N
Sbjct: 26 VIFLHGLGDTGHGWAEAFAGI--RSSHIK-YICPHAP----VRPVTLN------MNVA-- 70
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--- 491
+WF D G P Q+ G+ + +K + QE
Sbjct: 71 ------MPSWF---DIIG------------LSPD-SQEDESGIKQAAENIKALIDQEVKN 108
Query: 492 -GPFDGIL--GFSQGAAMAASVCAQW-ERLKGEIDFRFAILCSGFALHSAEFEHRSIN-- 545
P + I+ GFSQG A++ ++L G S + A F I
Sbjct: 109 GIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTAL------SCWLPLRASFPQGPIGGA 162
Query: 546 ---CPSLHIFGGDLGNDRQV---ANQASKELAKAFEEGCSV---IIEHDCGHIIPTRSPY 596
L G D V + E K +V E H +
Sbjct: 163 NRDISILQCHGDC---DPLVPLMFGSLTVEKLKTLVNPANVTFKTYE-GMMHSSCQQE-- 216
Query: 597 IDEIKSFLQRFL 608
+ ++K F+ + L
Sbjct: 217 MMDVKQFIDKLL 228
|
| >1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-06
Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 25/122 (20%)
Query: 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ 189
++ + H LQ +K+ VL+D R+ +G L
Sbjct: 5 ECINVADAHQKLQ-------------EKEAVLVDIRDPQSFAMG--HAVQAFHLT----- 44
Query: 190 FSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249
L ++ + V++ C G + A+ Y+ +G ++ V+ + GG + + Q
Sbjct: 45 NDTLGAFMR---DNDFDTPVMVMCYHGNSSKGAAQYLLQQG--YDVVYSIDGGFEAWQRQ 99
Query: 250 FP 251
FP
Sbjct: 100 FP 101
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 73/512 (14%), Positives = 139/512 (27%), Gaps = 189/512 (36%)
Query: 135 VEFHSILQSTGQVLDKENATDDKKLVLLDARN-LYETR------------IGKFRTPSV- 180
+E L + QV K N + + + L R L E R GK +
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKL--RQALLELRPAKNVLIDGVLGSGK----TWV 166
Query: 181 --ETL-DPEI-RQFSDLPTWI--------DNNAEQLQGKHVLMYCTGGIRCEMASAYVRS 228
+ ++ + W+ + E LQ + R +
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD-------- 218
Query: 229 KGAGFENVFQLYGGIQRYLEQFPDGGFFKGKNF-----VFDHRISVGSSDADIMGSCLLC 283
N+ IQ L + K K + V + V +A
Sbjct: 219 ---HSSNIKLRIHSIQAELRR-----LLKSKPYENCLLVLLN---V--QNAKAW------ 259
Query: 284 SSSFDDYSSRCRCTHCRMLVLVCDTCRMEG-AQYVCELCRKHGKSISSSPVSEDSKMKVT 342
++F+ C++L+ T R + ++ H + M +T
Sbjct: 260 -NAFN--------LSCKILL----TTRFKQVTDFLSAATTTH-------ISLDHHSMTLT 299
Query: 343 SPQIELKNVSSESTVSPQMPWRNGIVCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNI 402
E+K++ L K L
Sbjct: 300 PD--EVKSL-------------------------------------------LLKYLDCR 314
Query: 403 AEFVFIDAPHEL----PFIYQTSNVSSVIQNGPPPPSENCKKRFA-WFVAPDFSGKRETN 457
+ D P E+ P S+I +E+ + A W N
Sbjct: 315 PQ----DLPREVLTTNPR------RLSII-------AESIRDGLATW-----------DN 346
Query: 458 WKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASV-CAQWER 516
WK + + T ++ SL L+ ++ FD + F A + + W
Sbjct: 347 WKHVN-------CDKLTTIIESSLNVLEPAEYRK-MFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 517 LKGEIDFRFAILCSGFAL---HSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573
+ ++L E S+ + + +V + L ++
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTI------SIP----SIYLELKVKLENEYALHRS 448
Query: 574 FEEGCSVIIEHDCGHIIPTRSPYIDE-IKSFL 604
+ ++ D +IP PY+D+ S +
Sbjct: 449 IVDHYNIPKTFDSDDLIP---PYLDQYFYSHI 477
|
| >1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3 Length = 137 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-05
Identities = 16/97 (16%), Positives = 36/97 (37%), Gaps = 11/97 (11%)
Query: 150 KENATDDKKLVLLDARNLYETRIGKFRTPSVE--TLDPEIRQFSDLPTWIDNNAEQLQGK 207
+ ++ + L+D R+ E + P V+ L + + K
Sbjct: 31 YKLLQENPDITLIDVRDPDELKAM--GKPDVKNYKHMS----RGKLEPLLAKS-GLDPEK 83
Query: 208 HVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQ 244
V+++C R +A + + GF+ ++ GG+
Sbjct: 84 PVVVFCKTAARAALAGKTL--REYGFKTIYNSEGGMD 118
|
| >3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 3e-05
Identities = 22/106 (20%), Positives = 32/106 (30%), Gaps = 17/106 (16%)
Query: 153 ATDDKKLVLLDARNLYETRIGK---------FRTPSVETLDPEIRQFSDLPTWIDNNAEQ 203
D +VL+D R E I P LDP + D+
Sbjct: 35 GKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSA--- 91
Query: 204 LQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249
K ++ YC G R A S G+ N G + ++
Sbjct: 92 ---KELIFYCASGKRGGEAQKVASS--HGYSNTSLYPGSMNDWVSH 132
|
| >1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A Length = 134 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 4e-05
Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 19/122 (15%)
Query: 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYE-TRIGKFRTPSVETLDPE 186
+G SA ++ L D LLD R + ++G +
Sbjct: 3 SGSSGSAKNAYTKLG------------TDDNAQLLDIRATADFRQVGSPNIKGLGKKAVS 50
Query: 187 IR-QFSDLPTWIDNNAEQLQGKH---VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGG 242
D P ++ + + + + + E+ + V GF++ + + G
Sbjct: 51 TVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAELVAL--NGFKSAYAIKDG 108
Query: 243 IQ 244
+
Sbjct: 109 AE 110
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 24/198 (12%), Positives = 51/198 (25%), Gaps = 50/198 (25%)
Query: 446 VAPDF--SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFD----GILG 499
+ D + + Q D L + D ++G
Sbjct: 59 MTFDLRGHEGYASMRQSVTRA------QNLDDIKAA-YDQLAS----LPYVDAHSIAVVG 107
Query: 500 FSQGAAMAASVCAQ------------------WERLKGEIDFRFAIL-----CSGFALHS 536
S G ++A + + W++ K ++ ++ +
Sbjct: 108 LSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNL 167
Query: 537 AEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSV---IIEHDCGHII--- 590
A L + ND V + + A AF S+ +I H +
Sbjct: 168 ALAACAQYKGDVLLVEA---ENDVIVPHPVMRNYADAFTNARSLTSRVIA-GADHALSVK 223
Query: 591 PTRSPYIDEIKSFLQRFL 608
+ Y + +L +
Sbjct: 224 EHQQEYTRALIDWLTEMV 241
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 6e-05
Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 5/113 (4%)
Query: 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGD 555
G G S G M V A +R+K + + G + CP ++ D
Sbjct: 151 GWWGLSMGTMMGLPVTASDKRIKVALLGLMGV--EGVNGEDLVRLAPQVTCPVRYLLQWD 208
Query: 556 LGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608
D V+ Q+ EL + + H +L + L
Sbjct: 209 ---DELVSLQSGLELFGKLGTKQKTLHVNPGKHSAVPTWEMFAGTVDYLDQRL 258
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 1e-04
Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 26/185 (14%)
Query: 446 VAPDF--SGKRETNWKLADGPFDPHQ-YQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQ 502
+A D G+RE + P + Y+ + + + + G + G S
Sbjct: 55 LAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSL 114
Query: 503 GAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHR--------------SINCPS 548
GA +A + A+ R +G + F + + +
Sbjct: 115 GAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVP 174
Query: 549 LHIFGGDLGNDRQVANQASKELAKA-----FEEGCSVIIEHDCGHIIPTRSPYIDEIKSF 603
L G D V ++ +A E + +E GH + +F
Sbjct: 175 LLHLHGS--RDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP--LMARVGLAF 230
Query: 604 LQRFL 608
L+ +L
Sbjct: 231 LEHWL 235
|
| >3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 2e-04
Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 23/95 (24%)
Query: 156 DKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ-----FSDLPTWIDNNAEQL-QGKHV 209
+ +LD R+ G I DL D + L + + +
Sbjct: 11 EPAFTILDVRDRSTYNDGH------------IMGAMAMPIEDLV---DRASSSLEKSRDI 55
Query: 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQ 244
+Y G + A +RS AGFE+V +L GG+
Sbjct: 56 YVYGAGDEQTSQAVNLLRS--AGFEHVSELKGGLA 88
|
| >1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 Length = 161 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 3e-04
Identities = 26/153 (16%), Positives = 51/153 (33%), Gaps = 28/153 (18%)
Query: 114 FSSHPLLNPPDVSNAG-RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI 172
FS L + + +++S S+L + A K+ V++D R YE
Sbjct: 6 FSKGYLFHTVAGKHQDLKYISPEIMASVLNG-------KFANLIKEFVIIDCRYPYEYEG 58
Query: 173 GKFRT----PSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYC-TGGIRCEMASAYVR 227
G + E ++ + + +PT V+ +C R YVR
Sbjct: 59 GHIKGAVNLHMEEEVEDFLLKKPIVPTDGKR-------VIVVFHCEFSSERGPRMCRYVR 111
Query: 228 SK--------GAGFENVFQLYGGIQRYLEQFPD 252
+ + ++ L GG + + +
Sbjct: 112 ERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 36/248 (14%), Positives = 65/248 (26%), Gaps = 56/248 (22%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPP 434
++ LHG + + + + I P P T G
Sbjct: 26 LIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKII-YPTA-PPRSYTPM------KGGISN 77
Query: 435 SENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--- 491
WF + + + +DV L + +E
Sbjct: 78 --------VWFDRFKITNDCP----------------EHLESIDVMCQVLTDLIDEEVKS 113
Query: 492 -GPFDGIL--GFSQGAAMA-ASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHR----S 543
+ IL GFS G MA + + G S F ++ +
Sbjct: 114 GIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFAL------SSFLNKASAVYQALQKSN 167
Query: 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSV--IIEHDCGHIIPTRSPYIDEI 600
P L G D V + ++E + G + + H + +D +
Sbjct: 168 GVLPELFQCHGT--ADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTE--LDIL 223
Query: 601 KSFLQRFL 608
K ++ L
Sbjct: 224 KLWILTKL 231
|
| >3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 4e-04
Identities = 25/119 (21%), Positives = 39/119 (32%), Gaps = 34/119 (28%)
Query: 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ-- 189
A S L+ + +LD R+ G I
Sbjct: 2 SDAHVLKSRLEW-----------GEPAFTILDVRDRSTYNDGH------------IMGAM 38
Query: 190 ---FSDLPTWIDNNAEQL-QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQ 244
DL D + L + + + +Y G + A +RS AGFE+V +L GG+
Sbjct: 39 AMPIEDLV---DRASSSLEKSRDIYVYGAGDEQTSQAVNLLRS--AGFEHVSELKGGLA 92
|
| >3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens} Length = 127 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 7e-04
Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 23/129 (17%)
Query: 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFR------TPSVETLDP 185
+S ++ +L S +LLD R E I + +E D
Sbjct: 3 VSVTDYKRLLDS------------GAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDA 50
Query: 186 EIRQFSDLPTWIDNNAEQL-QGKHVLMYCTGGIRCEMASAYVRSKG----AGFENVFQLY 240
E + W + Q + + C G + A ++S V +
Sbjct: 51 ESLKLLKEAIWEEKQGTQEGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVV 110
Query: 241 GGIQRYLEQ 249
GG+ + +
Sbjct: 111 GGLMAWAAK 119
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 9e-04
Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 7/96 (7%)
Query: 516 RLKGEIDFRFAILCSGFALHSAEFE-HRSINCPSLHIFGGDLGNDRQVANQASKELAKAF 574
R K E + + + ++HI G Q L K
Sbjct: 254 RTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVG---ARSNWCPPQNQLFLQKTL 310
Query: 575 EEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQRFL 608
+ +I H++ +P I+ I + F+
Sbjct: 311 QNYHLDVIP-GGSHLVNVEAPDLVIERINHHIHEFV 345
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 608 | |||
| 4f67_A | 265 | UPF0176 protein LPG2838; structural genomics, PSI- | 100.0 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.87 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.87 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.85 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.85 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.79 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.77 | |
| 3iwh_A | 103 | Rhodanese-like domain protein; alpha-beta-alpha sa | 99.77 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.76 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.73 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.73 | |
| 3foj_A | 100 | Uncharacterized protein; protein SSP1007, structur | 99.73 | |
| 1gmx_A | 108 | GLPE protein; transferase, rhodanese, sulfurtransf | 99.72 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.72 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.71 | |
| 3eme_A | 103 | Rhodanese-like domain protein; alpha-beta-alpha sa | 99.71 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.69 | |
| 1qxn_A | 137 | SUD, sulfide dehydrogenase; polysulfide-sulfur tra | 99.68 | |
| 3i2v_A | 127 | Adenylyltransferase and sulfurtransferase MOCS3; r | 99.68 | |
| 3gk5_A | 108 | Uncharacterized rhodanese-related protein TVG08686 | 99.68 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.67 | |
| 3d1p_A | 139 | Putative thiosulfate sulfurtransferase YOR285W; at | 99.67 | |
| 3hix_A | 106 | ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q | 99.67 | |
| 2hhg_A | 139 | Hypothetical protein RPA3614; MCSG, structural gen | 99.67 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.66 | |
| 3ilm_A | 141 | ALR3790 protein; rhodanese-like, NSR437H, NESG, st | 99.66 | |
| 1tq1_A | 129 | AT5G66040, senescence-associated family protein; C | 99.65 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.63 | |
| 1wv9_A | 94 | Rhodanese homolog TT1651; CDC25, phosphatase, sulf | 99.63 | |
| 3flh_A | 124 | Uncharacterized protein LP_1913; alpha-beta protei | 99.62 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.62 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.62 | |
| 3g5j_A | 134 | Putative ATP/GTP binding protein; N-terminal domai | 99.61 | |
| 2fsx_A | 148 | RV0390, COG0607: rhodanese-related sulfurtransfera | 99.61 | |
| 1vee_A | 134 | Proline-rich protein family; hypothetical protein, | 99.61 | |
| 3nhv_A | 144 | BH2092 protein; alpha-beta protein, structural gen | 99.6 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.6 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.6 | |
| 3op3_A | 216 | M-phase inducer phosphatase 3; structural genomics | 99.59 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.59 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.59 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.58 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.58 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.58 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.58 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.58 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.57 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.57 | |
| 2jtq_A | 85 | Phage shock protein E; solution structure rhodanes | 99.57 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.57 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.57 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.57 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.56 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.56 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.56 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.56 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.56 | |
| 1t3k_A | 152 | Arath CDC25, dual-specificity tyrosine phosphatase | 99.56 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.56 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.55 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.55 | |
| 2k0z_A | 110 | Uncharacterized protein HP1203; A/B domain, struct | 99.55 | |
| 2vsw_A | 153 | Dual specificity protein phosphatase 16; hydrolase | 99.55 | |
| 2j6p_A | 152 | SB(V)-AS(V) reductase; arsenate reductase, antimon | 99.55 | |
| 1c25_A | 161 | CDC25A; hydrolase, cell cycle phosphatase,dual spe | 99.54 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.54 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.54 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.54 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.54 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.54 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.54 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.54 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.53 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.53 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.53 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.53 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.53 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.53 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.52 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.52 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.52 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.51 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.51 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.51 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.5 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.5 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.5 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.5 | |
| 2a2k_A | 175 | M-phase inducer phosphatase 2; dual specificity, s | 99.5 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.5 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.49 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.49 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.49 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.49 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.49 | |
| 1qb0_A | 211 | Protein (M-phase inducer phosphatase 2 (CDC25B)); | 99.49 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.49 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.49 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.49 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.49 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.48 | |
| 3f4a_A | 169 | Uncharacterized protein YGR203W; protein phosphata | 99.48 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.48 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.48 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.48 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.48 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.48 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.48 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.48 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.47 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.47 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.47 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.47 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.47 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.47 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.46 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.46 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.46 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.46 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.45 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.45 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.45 | |
| 1e0c_A | 271 | Rhodanese, sulfurtransferase; sulfur metabolism, t | 99.45 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.45 | |
| 2ouc_A | 142 | Dual specificity protein phosphatase 10; rhodanese | 99.45 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.44 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.44 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.44 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.44 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.44 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.44 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.44 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.44 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.44 | |
| 1e0c_A | 271 | Rhodanese, sulfurtransferase; sulfur metabolism, t | 99.43 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.43 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.43 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.43 | |
| 1urh_A | 280 | 3-mercaptopyruvate sulfurtransferase; rhodanese; 2 | 99.43 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.43 | |
| 3hzu_A | 318 | Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, | 99.42 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.42 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.42 | |
| 1rhs_A | 296 | Sulfur-substituted rhodanese; transferase, sulfurt | 99.42 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.41 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.41 | |
| 1hzm_A | 154 | Dual specificity protein phosphatase 6; hydrolase; | 99.41 | |
| 1urh_A | 280 | 3-mercaptopyruvate sulfurtransferase; rhodanese; 2 | 99.4 | |
| 3tg1_B | 158 | Dual specificity protein phosphatase 10; kinase/rh | 99.4 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.39 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.39 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.38 | |
| 3olh_A | 302 | MST, 3-mercaptopyruvate sulfurtransferase; structu | 99.38 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.38 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.38 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.37 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.37 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.37 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.37 | |
| 3aay_A | 277 | Putative thiosulfate sulfurtransferase; sulfurtran | 99.36 | |
| 1uar_A | 285 | Rhodanese; sulfurtransferase, riken structural gen | 99.36 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.36 | |
| 1yt8_A | 539 | Thiosulfate sulfurtransferase; rhodanase domains, | 99.36 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.36 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.36 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.36 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.35 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.35 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.35 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.34 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.34 | |
| 1rhs_A | 296 | Sulfur-substituted rhodanese; transferase, sulfurt | 99.34 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.33 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.33 | |
| 1uar_A | 285 | Rhodanese; sulfurtransferase, riken structural gen | 99.32 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.31 | |
| 3olh_A | 302 | MST, 3-mercaptopyruvate sulfurtransferase; structu | 99.31 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.31 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.31 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.3 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.3 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.3 | |
| 3ics_A | 588 | Coenzyme A-disulfide reductase; pyridine nucleotid | 99.29 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.29 | |
| 2gwf_A | 157 | Ubiquitin carboxyl-terminal hydrolase 8; protein-p | 99.28 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.28 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.28 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.28 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 98.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.27 | |
| 3hzu_A | 318 | Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, | 99.27 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.27 | |
| 3aay_A | 277 | Putative thiosulfate sulfurtransferase; sulfurtran | 99.26 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.26 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.25 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.25 | |
| 2wlr_A | 423 | Putative thiosulfate sulfurtransferase YNJE; rhoda | 99.25 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.25 | |
| 3tp9_A | 474 | Beta-lactamase and rhodanese domain protein; struc | 99.25 | |
| 3ntd_A | 565 | FAD-dependent pyridine nucleotide-disulphide oxido | 99.25 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.25 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.24 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.24 | |
| 1whb_A | 157 | KIAA0055; deubiqutinating enzyme, UBPY, structural | 99.24 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.24 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.24 | |
| 1okg_A | 373 | Possible 3-mercaptopyruvate sulfurtransferase; rho | 99.23 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.22 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.22 | |
| 1yt8_A | 539 | Thiosulfate sulfurtransferase; rhodanase domains, | 99.22 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.22 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.21 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.21 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.21 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.19 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.19 | |
| 2eg4_A | 230 | Probable thiosulfate sulfurtransferase; structural | 99.19 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.19 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.18 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.17 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.17 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.17 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.16 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.16 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.15 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.15 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.14 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.14 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.14 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.14 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.14 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.14 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.13 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.12 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.12 | |
| 3r2u_A | 466 | Metallo-beta-lactamase family protein; structural | 99.12 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.11 | |
| 2eg4_A | 230 | Probable thiosulfate sulfurtransferase; structural | 99.11 | |
| 2wlr_A | 423 | Putative thiosulfate sulfurtransferase YNJE; rhoda | 99.11 | |
| 1okg_A | 373 | Possible 3-mercaptopyruvate sulfurtransferase; rho | 99.1 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.09 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.08 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.08 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.06 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.04 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.0 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 98.98 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.97 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.97 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 98.95 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.93 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.91 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.88 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.86 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 98.82 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 98.81 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 98.8 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 98.8 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 98.79 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.78 | |
| 3tp9_A | 474 | Beta-lactamase and rhodanese domain protein; struc | 98.76 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 98.71 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 98.7 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 98.67 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 98.64 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 98.58 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 98.53 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.51 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.43 | |
| 3utn_X | 327 | Thiosulfate sulfurtransferase TUM1; rhodanese-like | 98.43 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.42 | |
| 3r2u_A | 466 | Metallo-beta-lactamase family protein; structural | 98.37 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 98.27 | |
| 3utn_X | 327 | Thiosulfate sulfurtransferase TUM1; rhodanese-like | 98.27 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.26 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 98.24 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 98.22 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.2 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.18 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.18 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.11 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.1 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.09 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 98.07 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.06 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 98.0 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 97.98 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 97.95 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 97.94 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.56 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 97.49 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 97.35 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 97.13 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 97.1 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 96.87 | |
| 1ulr_A | 88 | Putative acylphosphatase; hydrolase, structural ge | 96.73 | |
| 2bjd_A | 101 | Acylphosphatase; hyperthermophIle, hydrolase; 1.27 | 96.67 | |
| 2f46_A | 156 | Hypothetical protein; structural genomics, joint c | 96.62 | |
| 2fhm_A | 91 | Probable acylphosphatase; hydrolase; NMR {Bacillus | 96.57 | |
| 1w2i_A | 91 | Acylphosphatase; hydrolase, thermophilic, stabilit | 96.5 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 96.41 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.26 | |
| 2gv1_A | 92 | Probable acylphosphatase; globular alpha-helix/bet | 96.15 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 96.12 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 95.98 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 95.85 | |
| 2lxf_A | 121 | Uncharacterized protein; beaver fever, giardiasis, | 95.72 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 95.62 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 95.45 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 95.29 | |
| 1urr_A | 102 | CG18505 protein; acylphosphatase, enzyme; 1.5A {Dr | 95.25 | |
| 2vh7_A | 99 | Acylphosphatase-1; hydrolase, acetylation; 1.45A { | 95.17 | |
| 3trg_A | 98 | Acylphosphatase; fatty acid and phospholipid metab | 95.14 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 95.08 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 94.7 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 94.52 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 94.47 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 94.46 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 93.87 | |
| 1aps_A | 98 | Acylphosphatase; hydrolase(acting on acid anhydrid | 93.6 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 93.55 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 93.16 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 93.13 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 92.27 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 90.87 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 90.77 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 90.08 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 89.97 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 89.77 | |
| 1gxu_A | 91 | Hydrogenase maturation protein HYPF; phosphatase, | 89.76 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 89.15 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 89.01 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 88.62 | |
| 4erc_A | 150 | Dual specificity protein phosphatase 23; alpha bet | 87.14 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 86.83 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 86.78 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 86.41 | |
| 3rgo_A | 157 | Protein-tyrosine phosphatase mitochondrial 1; phos | 86.3 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 86.04 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 85.73 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 83.86 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 83.63 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 83.51 | |
| 2img_A | 151 | Dual specificity protein phosphatase 23; DUSP23, V | 83.45 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 83.24 | |
| 1xri_A | 151 | AT1G05000; structural genomics, protein structure | 80.15 |
| >4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-58 Score=467.90 Aligned_cols=237 Identities=33% Similarity=0.636 Sum_probs=216.6
Q ss_pred CceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCC
Q 007311 9 EQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDY 88 (608)
Q Consensus 9 ~~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~ 88 (608)
.+|.|++||||++|+||++++++|+++|++++|+||||||+|||||||||+.+++++|+++|+++|+|+++++|+|.++
T Consensus 13 ~~~~~~~~Y~f~~~~d~~~~~~~~~~~~~~~~~~G~i~~a~eGiN~t~~g~~~~~~~~~~~l~~~~~~~~~~~k~s~~~- 91 (265)
T 4f67_A 13 KDIIIASFYKFIPLNDFRSLREPILTKMHEIGIKGTIILAHEGVNGGFAGNREQMNVFYDYLRSDSRFADLHFKETYDN- 91 (265)
T ss_dssp SCEEEEEEEEECCCTTHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHHHHHHHTTSGGGTTCCCEEEEES-
T ss_pred cceEEEEEeCeecCCCHHHHHHHHHHHHHHCCCeEEEEEcCccceEEEEeCHHHHHHHHHHHHhCCCCCCCceeecccc-
Confidence 3799999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh
Q 007311 89 PLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY 168 (608)
Q Consensus 89 ~~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~ 168 (608)
.++|++|+||+++|||++|.. .+++ ....+++|+|+||++++++ ++++|||||+++
T Consensus 92 --------~~~F~~l~vk~k~eiV~~g~~-~~dp--~~~~~~~Is~~el~~ll~~-------------~~~vlIDVR~~~ 147 (265)
T 4f67_A 92 --------KNPFDKAKVKLRKEIVTMGVQ-KVDP--SYNAGTYLSPEEWHQFIQD-------------PNVILLDTRNDY 147 (265)
T ss_dssp --------SCCCSSEEEEECSSSSCCCCT-TCCC--TTCTTCEECHHHHHHHTTC-------------TTSEEEECSCHH
T ss_pred --------CCCccccccccccccccCCCC-CcCc--ccCCCceECHHHHHHHhcC-------------CCeEEEEeCCch
Confidence 469999999999999999974 3332 3556899999999999965 589999999999
Q ss_pred hhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 169 ETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 169 E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||+.|||+| +++++...+.+++.++.+.++..++++|||||++|+||++|+.+|+++ ||+|||+|+|||.+|.+
T Consensus 148 Ey~~GHIpG----AiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~RS~~Aa~~L~~~--Gf~nV~~L~GGi~aW~~ 221 (265)
T 4f67_A 148 EYELGTFKN----AINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGIRCEKTTAYMKEL--GFEHVYQLHDGILNYLE 221 (265)
T ss_dssp HHHHEEETT----CBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSHHHHHHHHHHHHH--TCSSEEEETTHHHHHHH
T ss_pred HhhcCcCCC----CEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCChHHHHHHHHHHHc--CCCCEEEecCHHHHHHH
Confidence 999999999 788887788888888876666789999999999999999999999998 99999999999999999
Q ss_pred hCCCC-CeeceeeeeeeeccccCCCCCCc
Q 007311 249 QFPDG-GFFKGKNFVFDHRISVGSSDADI 276 (608)
Q Consensus 249 ~~~~~-~~~~G~~fVFD~R~~~~~~~~~~ 276 (608)
++++. ++|+|+|||||+|+||++..+.+
T Consensus 222 ~~~~~~~~w~G~~fVFD~R~~~~~~l~~~ 250 (265)
T 4f67_A 222 SIPESESLWEGKCFVFDDRVAVDQKLDRV 250 (265)
T ss_dssp HSCTTTCCEEECEECSSTTCEECTTSCBC
T ss_pred hcCcccccccCcceeEcCccccccCHHHH
Confidence 99764 79999999999999999865544
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=201.69 Aligned_cols=195 Identities=15% Similarity=0.223 Sum_probs=138.9
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc---CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeee
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK---NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWF 445 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~---~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 445 (608)
.+++.+||+|||+|+|+++|. .|.+.|. +.+.|++|+||....... ....+++||
T Consensus 34 ~~~~~~VI~LHG~G~~~~dl~----~l~~~l~~~~~~~~~i~P~Ap~~~~~~~------------------~~~~~~~Wf 91 (246)
T 4f21_A 34 KQARFCVIWLHGLGADGHDFV----DIVNYFDVSLDEIRFIFPHADIIPVTIN------------------MGMQMRAWY 91 (246)
T ss_dssp SCCCEEEEEEEC--CCCCCGG----GGGGGCCSCCTTEEEEEECGGGSCTTTH------------------HHHHHHSCT
T ss_pred CcCCeEEEEEcCCCCCHHHHH----HHHHHhhhcCCCeEEEeCCCCccccccC------------------CCCCccccc
Confidence 356789999999999999998 5655554 468999999995422110 112367899
Q ss_pred ccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh------CCceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 446 VAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE------GPFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~------~~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
+....+.. ..+.....+++.++++.|..+++.. .....|+||||||+||+.++++ .
T Consensus 92 ~~~~~~~~-------------~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~-----~ 153 (246)
T 4f21_A 92 DIKSLDAN-------------SLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAIT-----S 153 (246)
T ss_dssp TCCCC----------------CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTT-----C
T ss_pred cccccccc-------------chhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHh-----C
Confidence 84432110 0111123456777777777766542 1345799999999999999983 4
Q ss_pred CCCccEEEEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCC
Q 007311 520 EIDFRFAILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPT 592 (608)
Q Consensus 520 ~~~l~~vIlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~ 592 (608)
+..++++|.+||+.|.... ......++|++++||+ +|++||.+.++++++.++.. .+++..+++ ||.++
T Consensus 154 ~~~~a~~i~~sG~lp~~~~~~~~~~~~~~~~Pvl~~HG~---~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~- 229 (246)
T 4f21_A 154 QRKLGGIMALSTYLPAWDNFKGKITSINKGLPILVCHGT---DDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC- 229 (246)
T ss_dssp SSCCCEEEEESCCCTTHHHHSTTCCGGGTTCCEEEEEET---TCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC-
T ss_pred ccccccceehhhccCccccccccccccccCCchhhcccC---CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC-
Confidence 6789999999999876432 1223457999999999 89999999999999999864 356666765 99985
Q ss_pred ChhhHHHHHHHHHHhC
Q 007311 593 RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 593 ~~~~~~~i~~Fl~~~L 608 (608)
+++++++.+||++.|
T Consensus 230 -~~~l~~~~~fL~k~l 244 (246)
T 4f21_A 230 -MEEIKDISNFIAKTF 244 (246)
T ss_dssp -HHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHh
Confidence 488999999999875
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=191.18 Aligned_cols=209 Identities=23% Similarity=0.403 Sum_probs=150.1
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++++||||||+|+|+..|..++..|++.|.+ +++++++|+|+...-. .. ...+++..........+.+.|+....
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~---~~-~~~~~~~~~~~~~g~g~~~~w~~~~~ 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKK---DL-PFEMDDEKWQATLDADVNRAWFYHSE 79 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGG---GC-SSCCCHHHHHHHHHTTCCEESSCCCS
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCc---Cc-ccccccccccccCCCCCCcccccCCC
Confidence 4578999999999999999989899999875 8999999999654310 00 00000000000000112467765211
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhh-CCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLK-GEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~-~~~~l~~vIl 528 (608)
. ....++.+++++|.+.+...++.++|+||||||++|+.++.+.+... ...+++++|+
T Consensus 80 -----------------~----~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~ 138 (243)
T 1ycd_A 80 -----------------I----SHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVV 138 (243)
T ss_dssp -----------------S----GGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEE
T ss_pred -----------------C----cchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEE
Confidence 0 12456788999999988877787899999999999999998754211 1346889999
Q ss_pred ecCCCCCccc-----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC------CcEEEEeC
Q 007311 529 CSGFALHSAE-----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG------CSVIIEHD 585 (608)
Q Consensus 529 isG~~~~~~~-----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~------~~~vv~~~ 585 (608)
++|+.+.... .....+++|+|++||+ +|++||.+.++++++.++.. ...++.++
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~---~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 215 (243)
T 1ycd_A 139 ISGYSFTEPDPEHPGELRITEKFRDSFAVKPDMKTKMIFIYGA---SDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHP 215 (243)
T ss_dssp ESCCCCEEECTTSTTCEEECGGGTTTTCCCTTCCCEEEEEEET---TCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEES
T ss_pred ecCCCCCCcccccccccccchhHHHhccCcccCCCCEEEEEeC---CCCccCHHHHHHHHHHhhhhccccccccEEEecC
Confidence 9998654211 1234588999999999 89999999999999988752 25667788
Q ss_pred CCCcCCCChhhHHHHHHHHHHh
Q 007311 586 CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 586 gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
+||.++...++++.+.+||.+.
T Consensus 216 ~gH~~~~~~~~~~~i~~fl~~~ 237 (243)
T 1ycd_A 216 GGHMVPNKKDIIRPIVEQITSS 237 (243)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCcCCchHHHHHHHHHHHHHh
Confidence 9999988777899999999864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-21 Score=196.58 Aligned_cols=192 Identities=23% Similarity=0.279 Sum_probs=140.8
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++.||||||+|+|++.|......|...++ .+.+++|+||..... ...+++||+...
T Consensus 64 ~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~-~~~~v~P~Ap~~~~~---------------------~~~G~~Wfd~~~ 121 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGADLLGLAEPLAPHLP-GTAFVAPDAPEPCRA---------------------NGFGFQWFPIPW 121 (285)
T ss_dssp CCSEEEEEECCTTBCHHHHHTTHHHHGGGST-TEEEEEECCSEECTT---------------------SSSCEESSCCHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhCC-CeEEEecCCCccccc---------------------CCCccccccccc
Confidence 5568899999999999999955555554443 589999999965431 123679987321
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH----h---CCceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ----E---GPFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~----~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
. +........+++.++.+.|..+++. . ...++|+||||||++|+.++++. +..
T Consensus 122 ~---------------~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~-----p~~ 181 (285)
T 4fhz_A 122 L---------------DGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRR-----AEE 181 (285)
T ss_dssp H---------------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----SSC
T ss_pred c---------------cCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhC-----ccc
Confidence 1 1111112345566666666655543 2 24568999999999999999843 568
Q ss_pred ccEEEEecCCCCCccc-cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCChhhHH
Q 007311 523 FRFAILCSGFALHSAE-FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRSPYID 598 (608)
Q Consensus 523 l~~vIlisG~~~~~~~-~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~~~~~ 598 (608)
++++|.+||+.+.... ......++|+|++||+ +|++||.+.++++++.++.. .+++.++.+ ||.+ .+++++
T Consensus 182 ~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~---~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i--~~~~l~ 256 (285)
T 4fhz_A 182 IAGIVGFSGRLLAPERLAEEARSKPPVLLVHGD---ADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGI--APDGLS 256 (285)
T ss_dssp CSEEEEESCCCSCHHHHHHHCCCCCCEEEEEET---TCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSC--CHHHHH
T ss_pred CceEEEeecCccCchhhhhhhhhcCcccceeeC---CCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC--CHHHHH
Confidence 9999999999875432 2345678999999999 89999999999999998853 356666665 9998 458899
Q ss_pred HHHHHHHHhC
Q 007311 599 EIKSFLQRFL 608 (608)
Q Consensus 599 ~i~~Fl~~~L 608 (608)
++.+||++.|
T Consensus 257 ~~~~fL~~~L 266 (285)
T 4fhz_A 257 VALAFLKERL 266 (285)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHC
Confidence 9999999875
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=185.72 Aligned_cols=177 Identities=21% Similarity=0.250 Sum_probs=130.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++||+|||+|+|++.|. .|++.|. +.+.+++|++| +++||+..
T Consensus 20 ~a~~~Vv~lHG~G~~~~~~~----~l~~~l~~~~~~v~~P~~~-----------------------------g~~w~~~~ 66 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAADII----SLQKVLKLDEMAIYAPQAT-----------------------------NNSWYPYS 66 (210)
T ss_dssp TCSEEEEEECCTTCCHHHHH----GGGGTSSCTTEEEEEECCG-----------------------------GGCSSSSC
T ss_pred cCCcEEEEEeCCCCCHHHHH----HHHHHhCCCCeEEEeecCC-----------------------------CCCccccc
Confidence 45678999999999999998 7888876 67889998877 55787733
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hC---CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EG---PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
... + ......+++++.+.+..+++. .+ ....|+||||||++|+.++++. +..
T Consensus 67 ~~~---------------~--~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~-----p~~ 124 (210)
T 4h0c_A 67 FMA---------------P--VQQNQPALDSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRN-----ARK 124 (210)
T ss_dssp TTS---------------C--GGGGTTHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHT-----BSC
T ss_pred cCC---------------C--cccchHHHHHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhC-----ccc
Confidence 211 0 011123455555555444433 22 3568999999999999999854 567
Q ss_pred ccEEEEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCChh
Q 007311 523 FRFAILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTRSP 595 (608)
Q Consensus 523 l~~vIlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~~~ 595 (608)
++++|.+||+.+.... ......++|+|++||+ +|++||.+.++++++.++.. .+++++++ .||.+. ++
T Consensus 125 ~~~vv~~sg~l~~~~~~~~~~~~~~~~~Pvl~~hG~---~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~--~~ 199 (210)
T 4h0c_A 125 YGGIIAFTGGLIGQELAIGNYKGDFKQTPVFISTGN---PDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS--GD 199 (210)
T ss_dssp CSEEEEETCCCCSSSCCGGGCCBCCTTCEEEEEEEE---SCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC--HH
T ss_pred CCEEEEecCCCCChhhhhhhhhhhccCCceEEEecC---CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC--HH
Confidence 9999999998865432 1234557999999999 89999999999999998853 35566665 499984 58
Q ss_pred hHHHHHHHHHH
Q 007311 596 YIDEIKSFLQR 606 (608)
Q Consensus 596 ~~~~i~~Fl~~ 606 (608)
+++.+.+||.+
T Consensus 200 el~~i~~wL~k 210 (210)
T 4h0c_A 200 EIQLVNNTILK 210 (210)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHHHcC
Confidence 89999999864
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=9.4e-19 Score=169.34 Aligned_cols=185 Identities=18% Similarity=0.216 Sum_probs=134.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
...| ||+|||+|++...|. .+.+.|...+.++.+|+|.... +.++|++.+.
T Consensus 15 ~~~p-vv~lHG~g~~~~~~~----~~~~~l~~~~~v~~~~~~~~~~------------------------g~~~~~~~~g 65 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEHQLV----EIAEMIAPSHPILSIRGRINEQ------------------------GVNRYFKLRG 65 (209)
T ss_dssp TSCC-EEEECCTTCCTTTTH----HHHHHHSTTCCEEEECCSBCGG------------------------GCCBSSCBCS
T ss_pred CCCC-EEEEeCCCCCHHHHH----HHHHhcCCCceEEEecCCcCCC------------------------Ccccceeccc
Confidence 3456 999999999999999 7777777789999999984311 2567876332
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHH----hHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIF----SQEG---PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i----~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
.... ..+.+ ..+++...++.+.+.+ ...+ ...+|+||||||.+|+.++.+ .+..
T Consensus 66 ~g~~-------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~-----~~~~ 126 (209)
T 3og9_A 66 LGGF-------TKENF-------DLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLR-----GKIN 126 (209)
T ss_dssp CTTC-------SGGGB-------CHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHT-----TSCC
T ss_pred cccc-------ccCCC-------CHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHh-----CCcc
Confidence 1100 00001 1223444444444433 3322 356899999999999999984 3567
Q ss_pred ccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHH
Q 007311 523 FRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEI 600 (608)
Q Consensus 523 l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i 600 (608)
++++|+++++.+.........+.+|+|++||+ +|+++|.+.++++++.+... ..++.++++||.+. .+..+++
T Consensus 127 ~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~---~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~--~~~~~~~ 201 (209)
T 3og9_A 127 FDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAP---NDMIVPQKNFGDLKGDLEDSGCQLEIYESSLGHQLT--QEEVLAA 201 (209)
T ss_dssp CSEEEEESCCCCCCCCCCCCCTTCEEEEEECT---TCSSSCHHHHHHHHHHHHHTTCEEEEEECSSTTSCC--HHHHHHH
T ss_pred cceEEEECCCCCCcccccccccCCCEEEEcCC---CCCccCHHHHHHHHHHHHHcCCceEEEEcCCCCcCC--HHHHHHH
Confidence 99999999988776555566788999999999 89999999999999998854 25666778999994 4789999
Q ss_pred HHHHHHh
Q 007311 601 KSFLQRF 607 (608)
Q Consensus 601 ~~Fl~~~ 607 (608)
.+||++.
T Consensus 202 ~~~l~~~ 208 (209)
T 3og9_A 202 KKWLTET 208 (209)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999863
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=161.74 Aligned_cols=195 Identities=16% Similarity=0.175 Sum_probs=140.4
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHH-c-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKK-L-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~-L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.++++||+|||+|++...|......|.+. + ...++++++++|........ ....+.|++.
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~------------------~~~~~~w~~~ 82 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMK------------------GGISNVWFDR 82 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGT------------------TCEEECSSCC
T ss_pred CCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCC------------------CCccccceec
Confidence 45689999999999999999555555543 1 24689999999953221110 1235678873
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH------hCCceEEEecChhHHHHHHHHHHHhhhhCCC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ------EGPFDGILGFSQGAAMAASVCAQWERLKGEI 521 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~------~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~ 521 (608)
.... . ........+++.++.|..+++. .....+|+||||||.+|+.++.+. +.
T Consensus 83 ~~~~-------------~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----~~ 141 (239)
T 3u0v_A 83 FKIT-------------N---DCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRN-----HQ 141 (239)
T ss_dssp SSSS-------------S---SSCCCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHH-----CT
T ss_pred cCCC-------------c---ccccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhC-----cc
Confidence 3211 0 0011234667777777777665 224568999999999999999855 45
Q ss_pred CccEEEEecCCCCCcccc----ccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCC
Q 007311 522 DFRFAILCSGFALHSAEF----EHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTR 593 (608)
Q Consensus 522 ~l~~vIlisG~~~~~~~~----~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~ 593 (608)
.++++|+++++.+..... ......+| +|++||+ +|.++|.+.++++++.+... ..+++++++ ||.+.
T Consensus 142 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pp~li~~G~---~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-- 216 (239)
T 3u0v_A 142 DVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGT---ADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS-- 216 (239)
T ss_dssp TSSEEEEESCCCCTTCHHHHHHHHCCSCCCCEEEEEET---TCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC--
T ss_pred ccceEEEecCCCCchhHHHHHHHhhccCCCCEEEEeeC---CCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC--
Confidence 799999999998765431 13567788 9999999 89999999999999988742 367777765 99986
Q ss_pred hhhHHHHHHHHHHhC
Q 007311 594 SPYIDEIKSFLQRFL 608 (608)
Q Consensus 594 ~~~~~~i~~Fl~~~L 608 (608)
.+..+.+.+||.++|
T Consensus 217 ~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 217 KTELDILKLWILTKL 231 (239)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 478999999998865
|
| >3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-19 Score=155.48 Aligned_cols=95 Identities=18% Similarity=0.398 Sum_probs=78.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.||++|++++|.+. ++++|||||++.||+.|||+| +++.+. .+++.+++ +.+++++|
T Consensus 2 k~Is~~el~~~l~~~------------~~~~liDvR~~~e~~~ghIpg----A~~ip~---~~l~~~~~---~l~~~~~i 59 (103)
T 3iwh_A 2 KSITTDELKNKLLES------------KPVQIVDVRTDEETAMGYIPN----AKLIPM---DTIPDNLN---SFNKNEIY 59 (103)
T ss_dssp CEECHHHHHHGGGSS------------SCCEEEECSCHHHHTTCBCTT----CEECCG---GGGGGCGG---GCCTTSEE
T ss_pred CCcCHHHHHHHHhCC------------CCeEEEECCChhHHhcCccCC----cccCcc---cchhhhhh---hhcCCCeE
Confidence 468999999998763 679999999999999999999 555553 34554433 34689999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||.+|.||.+|+.+|+++ ||+ +++|.|||.+|.++
T Consensus 60 vv~C~~G~rS~~aa~~L~~~--G~~-~~~l~GG~~~W~~~ 96 (103)
T 3iwh_A 60 YIVCAGGVRSAKVVEYLEAN--GID-AVNVEGGMHAWGDE 96 (103)
T ss_dssp EEECSSSSHHHHHHHHHHTT--TCE-EEEETTHHHHHCSS
T ss_pred EEECCCCHHHHHHHHHHHHc--CCC-EEEecChHHHHHHC
Confidence 99999999999999999997 995 45799999999764
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-18 Score=165.17 Aligned_cols=179 Identities=17% Similarity=0.172 Sum_probs=129.2
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.||+|||+|++...|. .+.+.|.+++.++++|+|.... +++.|++....
T Consensus 29 ~~p~vv~lHG~g~~~~~~~----~~~~~l~~~~~vv~~d~~~~~~------------------------~g~~~~~~~~~ 80 (223)
T 3b5e_A 29 SRECLFLLHGSGVDETTLV----PLARRIAPTATLVAARGRIPQE------------------------DGFRWFERIDP 80 (223)
T ss_dssp CCCEEEEECCTTBCTTTTH----HHHHHHCTTSEEEEECCSEEET------------------------TEEESSCEEET
T ss_pred CCCEEEEEecCCCCHHHHH----HHHHhcCCCceEEEeCCCCCcC------------------------CccccccccCC
Confidence 3478999999999999998 6777777789999999984321 14577652110
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH----h---CCceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ----E---GPFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~----~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
+. ....++....+.+.++++. . ....+|+||||||.+|+.++.+. +..+
T Consensus 81 ------------~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~ 136 (223)
T 3b5e_A 81 ------------TR-------FEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLH-----PGIV 136 (223)
T ss_dssp ------------TE-------ECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----TTSC
T ss_pred ------------Cc-------ccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhC-----cccc
Confidence 00 0112333344444433332 1 23458999999999999999853 5579
Q ss_pred cEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHH
Q 007311 524 RFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIK 601 (608)
Q Consensus 524 ~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~ 601 (608)
+++|+++++.+.........+++|+|+++|+ +|.++|.+.++ +++.+... ..+++++++||.+.. +..+.+.
T Consensus 137 ~~~v~~~~~~~~~~~~~~~~~~~P~li~~G~---~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~~gH~~~~--~~~~~i~ 210 (223)
T 3b5e_A 137 RLAALLRPMPVLDHVPATDLAGIRTLIIAGA---ADETYGPFVPA-LVTLLSRHGAEVDARIIPSGHDIGD--PDAAIVR 210 (223)
T ss_dssp SEEEEESCCCCCSSCCCCCCTTCEEEEEEET---TCTTTGGGHHH-HHHHHHHTTCEEEEEEESCCSCCCH--HHHHHHH
T ss_pred ceEEEecCccCccccccccccCCCEEEEeCC---CCCcCCHHHHH-HHHHHHHCCCceEEEEecCCCCcCH--HHHHHHH
Confidence 9999999988754333445678999999999 89999999999 99988752 256677779999854 6788999
Q ss_pred HHHHHh
Q 007311 602 SFLQRF 607 (608)
Q Consensus 602 ~Fl~~~ 607 (608)
+||++.
T Consensus 211 ~~l~~~ 216 (223)
T 3b5e_A 211 QWLAGP 216 (223)
T ss_dssp HHHHCC
T ss_pred HHHHhh
Confidence 999764
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=155.31 Aligned_cols=191 Identities=17% Similarity=0.228 Sum_probs=136.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..++.||+|||+|++...|. .+.+.|. .++.++.+|.|.. ++... .....+.||+.+
T Consensus 21 ~~~~~vv~lHG~~~~~~~~~----~~~~~l~~~g~~v~~~~~~~~-~~~~~-----------------~~~~~~~w~d~~ 78 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHGWA----EAFAGIRSSHIKYICPHAPVR-PVTLN-----------------MNVAMPSWFDII 78 (232)
T ss_dssp CCSEEEEEECCSSSCHHHHH----HHHHTTCCTTEEEEECCCCEE-EEGGG-----------------TTEEEECSSCBC
T ss_pred CCCceEEEEecCCCccchHH----HHHHHHhcCCcEEEecCCCcc-ccccc-----------------cccccccccccc
Confidence 55689999999999999998 7777777 4899999998841 11100 012356787744
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---C---CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---G---PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
... ... ......+++.++.+.++++.. + ...+|+||||||.+|+.++.+ .+..
T Consensus 79 g~~---------~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~ 137 (232)
T 1fj2_A 79 GLS---------PDS-------QEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALT-----TQQK 137 (232)
T ss_dssp CCS---------TTC-------CBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTT-----CSSC
T ss_pred cCC---------ccc-------ccccHHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHh-----CCCc
Confidence 320 000 011234555556666665542 2 356899999999999999983 3557
Q ss_pred ccEEEEecCCCCCccc-----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc----CCcEEEEeC-CCCcCCC
Q 007311 523 FRFAILCSGFALHSAE-----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE----GCSVIIEHD-CGHIIPT 592 (608)
Q Consensus 523 l~~vIlisG~~~~~~~-----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~----~~~~vv~~~-gGH~ip~ 592 (608)
++++|+++++.+.... .....+++|+|+++|+ +|.+++.+.++++.+.+.. ...+++.++ +||.+.
T Consensus 138 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~- 213 (232)
T 1fj2_A 138 LAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGD---CDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC- 213 (232)
T ss_dssp CSEEEEESCCCTTGGGSCSSCCCSTTTTCCEEEEEET---TCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC-
T ss_pred eeEEEEeecCCCCCccccccccccccCCCCEEEEecC---CCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccC-
Confidence 9999999998876542 1246788999999999 8999999999999888863 126666666 499983
Q ss_pred ChhhHHHHHHHHHHhC
Q 007311 593 RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 593 ~~~~~~~i~~Fl~~~L 608 (608)
.+..+.+.+||.++|
T Consensus 214 -~~~~~~i~~~l~~~l 228 (232)
T 1fj2_A 214 -QQEMMDVKQFIDKLL 228 (232)
T ss_dssp -HHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHhc
Confidence 467899999998875
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=156.23 Aligned_cols=194 Identities=20% Similarity=0.291 Sum_probs=136.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||++||+|++...|......|++ ...++.++.+|+|...... ........|++...
T Consensus 22 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~g~~v~~~d~p~~~~~~------------------~~g~~~~~w~d~~g 82 (226)
T 3cn9_A 22 NADACIIWLHGLGADRTDFKPVAEALQM-VLPSTRFILPQAPSQAVTV------------------NGGWVMPSWYDILA 82 (226)
T ss_dssp TCCEEEEEECCTTCCGGGGHHHHHHHHH-HCTTEEEEECCCCEEECGG------------------GTSCEEECSSCBCC
T ss_pred CCCCEEEEEecCCCChHHHHHHHHHHhh-cCCCcEEEeecCCCCcccc------------------CCCCcccccccccc
Confidence 4568999999999999999855444443 1158999999998321100 00123567877432
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---C---CceEEEecChhHHHHHHHHH-HHhhhhCCCC
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---G---PFDGILGFSQGAAMAASVCA-QWERLKGEID 522 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~---~~~~IlGFSQGa~vAl~la~-~~~~~~~~~~ 522 (608)
.. . +. ......+.+.++.+..+++.. + ...+|+||||||.+|+.++. +. +..
T Consensus 83 ~g-----------~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~ 141 (226)
T 3cn9_A 83 FS-----------P--AR---AIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRY-----AQP 141 (226)
T ss_dssp SS-----------S--TT---CBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTC-----SSC
T ss_pred cc-----------c--cc---cccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcC-----ccC
Confidence 11 0 00 012334555566666655543 2 35689999999999999987 54 346
Q ss_pred ccEEEEecCCCCCcccc--ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHH
Q 007311 523 FRFAILCSGFALHSAEF--EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYID 598 (608)
Q Consensus 523 l~~vIlisG~~~~~~~~--~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~ 598 (608)
++++|+++++.+..... ....+++|+|+++|+ +|.++|.+.++++++.+... ..+++.+++||.++. +..+
T Consensus 142 ~~~~v~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~~--~~~~ 216 (226)
T 3cn9_A 142 LGGVLALSTYAPTFDDLALDERHKRIPVLHLHGS---QDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVSL--EEIH 216 (226)
T ss_dssp CSEEEEESCCCGGGGGCCCCTGGGGCCEEEEEET---TCSSSCHHHHHHHHHHHHHTTCCEEEEEESCCSSCCH--HHHH
T ss_pred cceEEEecCcCCCchhhhhcccccCCCEEEEecC---CCCccCHHHHHHHHHHHHHcCCceeEEEecCCCCcch--hhHH
Confidence 99999999987654321 235778999999999 89999999999999998852 256666669999854 6788
Q ss_pred HHHHHHHHhC
Q 007311 599 EIKSFLQRFL 608 (608)
Q Consensus 599 ~i~~Fl~~~L 608 (608)
++.+||.++|
T Consensus 217 ~i~~~l~~~l 226 (226)
T 3cn9_A 217 DIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999999875
|
| >3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-18 Score=148.61 Aligned_cols=95 Identities=16% Similarity=0.339 Sum_probs=78.7
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.|+++|+.+++++. ++++|||||++.||+.|||+| +++.+.. ++...+. +.+++++|
T Consensus 2 ~~is~~el~~~l~~~------------~~~~liDvR~~~e~~~ghIpg----A~~ip~~---~l~~~~~---~l~~~~~i 59 (100)
T 3foj_A 2 ESITVTELKEKILDA------------NPVNIVDVRTDQETAMGIIPG----AETIPMN---SIPDNLN---YFNDNETY 59 (100)
T ss_dssp CEECHHHHHHGGGSS------------SCCEEEECSCHHHHTTCBCTT----CEECCGG---GGGGCGG---GSCTTSEE
T ss_pred CccCHHHHHHHHhcC------------CCcEEEECCCHHHHhcCcCCC----CEECCHH---HHHHHHH---hCCCCCcE
Confidence 368999999998643 689999999999999999999 5555532 3333222 34688999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||.+|.||..|+.+|+++ || |||+|.||+.+|.++
T Consensus 60 vvyC~~g~rs~~a~~~L~~~--G~-~v~~l~GG~~~W~~~ 96 (100)
T 3foj_A 60 YIICKAGGRSAQVVQYLEQN--GV-NAVNVEGGMDEFGDE 96 (100)
T ss_dssp EEECSSSHHHHHHHHHHHTT--TC-EEEEETTHHHHHCSS
T ss_pred EEEcCCCchHHHHHHHHHHC--CC-CEEEecccHHHHHHc
Confidence 99999999999999999987 99 999999999999753
|
| >1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6.8e-18 Score=147.93 Aligned_cols=96 Identities=22% Similarity=0.408 Sum_probs=82.0
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.|+++++.+++++ ++++|||||++.||+.|||+| +++.+. .++..++.+ .+++++|
T Consensus 5 ~~i~~~~l~~~~~~-------------~~~~liDvR~~~e~~~ghIpg----A~~ip~---~~l~~~~~~---l~~~~~i 61 (108)
T 1gmx_A 5 ECINVADAHQKLQE-------------KEAVLVDIRDPQSFAMGHAVQ----AFHLTN---DTLGAFMRD---NDFDTPV 61 (108)
T ss_dssp EEECHHHHHHHHHT-------------TCCEEEECSCHHHHHHCEETT----CEECCH---HHHHHHHHH---SCTTSCE
T ss_pred cccCHHHHHHHHhC-------------CCCEEEEcCCHHHHHhCCCcc----CEeCCH---HHHHHHHHh---cCCCCCE
Confidence 57899999999976 368999999999999999999 565553 244555443 4689999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
|+||.+|.|+..|+..|++. ||+|||+|.||+.+|.+++
T Consensus 62 vvyc~~g~rs~~a~~~L~~~--G~~~v~~l~GG~~~W~~~~ 100 (108)
T 1gmx_A 62 MVMCYHGNSSKGAAQYLLQQ--GYDVVYSIDGGFEAWQRQF 100 (108)
T ss_dssp EEECSSSSHHHHHHHHHHHH--TCSSEEEETTHHHHHHHHC
T ss_pred EEEcCCCchHHHHHHHHHHc--CCceEEEecCCHHHHHHhC
Confidence 99999999999999999998 9999999999999998773
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=157.80 Aligned_cols=186 Identities=19% Similarity=0.178 Sum_probs=129.8
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++.||++||+|++...|. .+.+.|...+.++.+|+++.-. +...|++...
T Consensus 60 ~~~p~vv~~HG~~~~~~~~~----~~~~~l~~~~~v~~~~~d~~g~------------------------g~s~~~~~~~ 111 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDENQFF----DFGARLLPQATILSPVGDVSEH------------------------GAARFFRRTG 111 (251)
T ss_dssp TTSCEEEEECCTTCCHHHHH----HHHHHHSTTSEEEEECCSEEET------------------------TEEESSCBCG
T ss_pred CCCcEEEEEeCCCCCHhHHH----HHHHhcCCCceEEEecCCcCCC------------------------CCcccccCCC
Confidence 35689999999999999998 7777777779999997663211 2445654211
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. +..+..+ .....++..+.+..+++. .....+|+||||||.+|+.++.+. +..++++|+
T Consensus 112 ~------------~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~v~~~v~ 171 (251)
T 2r8b_A 112 E------------GVYDMVD---LERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQ-----PELFDAAVL 171 (251)
T ss_dssp G------------GCBCHHH---HHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHS-----TTTCSEEEE
T ss_pred C------------CcCCHHH---HHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhC-----CcccCeEEE
Confidence 0 0011101 111223333333333333 335568999999999999999853 457999999
Q ss_pred ecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeCCCCcCCCChhhHHHHHHHHHH
Q 007311 529 CSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHDCGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 529 isG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
+++..+.........+++|+|+++|+ +|.++|.+.++++++.++. ....++..++||.+.. +..+.+.+||.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~P~li~~g~---~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~l~~ 246 (251)
T 2r8b_A 172 MHPLIPFEPKISPAKPTRRVLITAGE---RDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRS--GEIDAVRGFLAA 246 (251)
T ss_dssp ESCCCCSCCCCCCCCTTCEEEEEEET---TCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCH--HHHHHHHHHHGG
T ss_pred EecCCCccccccccccCCcEEEeccC---CCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCH--HHHHHHHHHHHH
Confidence 99987765323345678999999999 8999999999999999983 3234466788999854 678999999988
Q ss_pred hC
Q 007311 607 FL 608 (608)
Q Consensus 607 ~L 608 (608)
+|
T Consensus 247 ~l 248 (251)
T 2r8b_A 247 YG 248 (251)
T ss_dssp GC
T ss_pred hc
Confidence 75
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.7e-17 Score=155.59 Aligned_cols=194 Identities=21% Similarity=0.260 Sum_probs=132.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||++||+|++...|......|.+ ...++.++.+|+|....... .......|++...
T Consensus 12 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-~~~g~~v~~~d~p~~~~~~~------------------~g~~~~~w~d~~g 72 (218)
T 1auo_A 12 PADACVIWLHGLGADRYDFMPVAEALQE-SLLTTRFVLPQAPTRPVTIN------------------GGYEMPSWYDIKA 72 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHT-TCTTEEEEECCCCEEEEGGG------------------TTEEEECSSCEEE
T ss_pred CCCcEEEEEecCCCChhhHHHHHHHHhh-cCCceEEEeCCCCCccccCC------------------CCCcccceecCcC
Confidence 4567899999999999999844444432 11589999999984311100 0112456766322
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---C---CceEEEecChhHHHHHHHHH-HHhhhhCCCC
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---G---PFDGILGFSQGAAMAASVCA-QWERLKGEID 522 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~---~~~~IlGFSQGa~vAl~la~-~~~~~~~~~~ 522 (608)
.. . +. ......+.+..+.+..+++.. + ...+|+||||||.+|+.++. +. +..
T Consensus 73 ~g-----------~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~ 131 (218)
T 1auo_A 73 MS-----------P--AR---SISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINW-----QGP 131 (218)
T ss_dssp CS-----------S--SC---EECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTC-----CSC
T ss_pred CC-----------c--cc---ccchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcC-----CCC
Confidence 10 0 00 011234555555555555542 2 25689999999999999987 53 457
Q ss_pred ccEEEEecCCCCCcc-c--cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhH
Q 007311 523 FRFAILCSGFALHSA-E--FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYI 597 (608)
Q Consensus 523 l~~vIlisG~~~~~~-~--~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~ 597 (608)
++++|+++++.+... . .....+++|+|+++|+ +|.++|.+.++++.+.+... ..+++++++||.+.. +..
T Consensus 132 ~~~~v~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~~--~~~ 206 (218)
T 1auo_A 132 LGGVIALSTYAPTFGDELELSASQQRIPALCLHGQ---YDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLP--QEI 206 (218)
T ss_dssp CCEEEEESCCCTTCCTTCCCCHHHHTCCEEEEEET---TCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCCH--HHH
T ss_pred ccEEEEECCCCCCchhhhhhhhcccCCCEEEEEeC---CCceecHHHHHHHHHHHHhCCCceEEEEecCCCccCH--HHH
Confidence 999999999987511 1 1123678999999999 89999999999999999852 256666669999855 678
Q ss_pred HHHHHHHHHhC
Q 007311 598 DEIKSFLQRFL 608 (608)
Q Consensus 598 ~~i~~Fl~~~L 608 (608)
+++.+||.++|
T Consensus 207 ~~~~~~l~~~l 217 (218)
T 1auo_A 207 HDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998864
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.69 E-value=5.3e-16 Score=157.74 Aligned_cols=176 Identities=12% Similarity=0.132 Sum_probs=120.0
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.|||+|||+++...|. .+++.|. .+++++.+|.| .+. ....+..
T Consensus 50 ~~~~VlllHG~~~s~~~~~----~la~~La~~Gy~Via~Dl~--------GhG-------------------~S~~~~~- 97 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQSMR----FLAEGFARAGYTVATPRLT--------GHG-------------------TTPAEMA- 97 (281)
T ss_dssp SSEEEEEECCTTCCGGGGH----HHHHHHHHTTCEEEECCCT--------TSS-------------------SCHHHHH-
T ss_pred CCceEEEECCCCCCHHHHH----HHHHHHHHCCCEEEEECCC--------CCC-------------------CCCcccc-
Confidence 3456999999999999999 6666665 47999999988 110 0000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.. . .+++.+.+..+.+.+.......+|+||||||.+|+.+|.++ +..++++|++
T Consensus 98 --------------~~---~----~~~~~~d~~~~~~~l~~~~~~v~lvG~S~GG~ia~~~a~~~-----p~~v~~lvl~ 151 (281)
T 4fbl_A 98 --------------AS---T----ASDWTADIVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQF-----PERFAGIMPI 151 (281)
T ss_dssp --------------TC---C----HHHHHHHHHHHHHHHHHHCSEEEEEEETHHHHHHHHHHHHS-----TTTCSEEEEE
T ss_pred --------------CC---C----HHHHHHHHHHHHHHHHhCCCeEEEEEECcchHHHHHHHHhC-----chhhhhhhcc
Confidence 00 0 01122222222233333455668999999999999999854 5679999999
Q ss_pred cCCCCCccc---------------------------------------------------cccCCCCCCEEEEEcCCCCC
Q 007311 530 SGFALHSAE---------------------------------------------------FEHRSINCPSLHIFGGDLGN 558 (608)
Q Consensus 530 sG~~~~~~~---------------------------------------------------~~~~~i~~PvL~i~G~~~~~ 558 (608)
++....... ....+|++|+|++||+ +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~---~ 228 (281)
T 4fbl_A 152 NAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSR---E 228 (281)
T ss_dssp SCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEES---S
T ss_pred cchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeC---C
Confidence 886432210 1235689999999999 8
Q ss_pred CcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCC--hh-hHHHHHHHHHHh
Q 007311 559 DRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTR--SP-YIDEIKSFLQRF 607 (608)
Q Consensus 559 D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~--~~-~~~~i~~Fl~~~ 607 (608)
|.++|.+.++++++.+.....+++.+ ++||.++.+ ++ ..+.|.+||+++
T Consensus 229 D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 229 DHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp CSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred CCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 99999999999999987654666665 569987543 23 678899999863
|
| >1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3 | Back alignment and structure |
|---|
Probab=99.68 E-value=7e-17 Score=147.84 Aligned_cols=99 Identities=23% Similarity=0.386 Sum_probs=81.9
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc-cc--cCCCCccccCcccccCCCchHHHHhhhhhcC
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI-GK--FRTPSVETLDPEIRQFSDLPTWIDNNAEQLQ 205 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~-Gh--~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k 205 (608)
...|+++|+.+++++. ++++|||||++.||+. || |+| +++.+ +.++... .......+
T Consensus 22 ~~~is~~el~~~l~~~------------~~~~liDVR~~~E~~~~gh~~Ipg----Ainip---~~~l~~~-~~~~~l~~ 81 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQEN------------PDITLIDVRDPDELKAMGKPDVKN----YKHMS---RGKLEPL-LAKSGLDP 81 (137)
T ss_dssp SEEECHHHHHHHHHHC------------TTSEEEECCCHHHHHHTCEECCSS----EEECC---TTTSHHH-HHHHCCCT
T ss_pred CcccCHHHHHHHHhcC------------CCeEEEECCCHHHHHhcCCcCCCC----CEEcc---hHHhhhH-HhhccCCC
Confidence 4579999999999732 5799999999999999 99 999 56655 3344431 11123568
Q ss_pred CCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 206 GKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 206 ~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+++||+||.+|.||.+|+.+|++. ||+|||+|.|||.+|.++
T Consensus 82 ~~~ivvyC~~G~rS~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 123 (137)
T 1qxn_A 82 EKPVVVFCKTAARAALAGKTLREY--GFKTIYNSEGGMDKWLEE 123 (137)
T ss_dssp TSCEEEECCSSSCHHHHHHHHHHH--TCSCEEEESSCHHHHHHT
T ss_pred CCeEEEEcCCCcHHHHHHHHHHHc--CCcceEEEcCcHHHHHHC
Confidence 999999999999999999999998 999999999999999876
|
| >3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-17 Score=147.07 Aligned_cols=105 Identities=16% Similarity=0.241 Sum_probs=79.7
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCc-hH---HHHhhhhhcCC
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDL-PT---WIDNNAEQLQG 206 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~-~~---~~~~~~~~~k~ 206 (608)
.|+++|+.++++++ ++++|||||++.||+.|||+| +++.+...+.+. .. .+.+.+...++
T Consensus 2 ~is~~el~~~l~~~------------~~~~liDvR~~~e~~~ghIpg----A~~ip~~~~~~~~~~~~~~~~~~l~~~~~ 65 (127)
T 3i2v_A 2 RVSVTDYKRLLDSG------------AFHLLLDVRPQVEVDICRLPH----ALHIPLKHLERRDAESLKLLKEAIWEEKQ 65 (127)
T ss_dssp EECHHHHHHHHHHT------------CCCEEEECSCHHHHHHCCCTT----SEECCHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhCC------------CCeEEEECCCHHHhhheecCC----ceeCChHHHhhhhhhhHHHHHHHHhhhcc
Confidence 58999999999863 469999999999999999999 555443333221 11 11111121234
Q ss_pred -------CeEEEEcCCCccHHHHHHHHHhc----CCCCCcEEEcCccHHHHHHhCC
Q 007311 207 -------KHVLMYCTGGIRCEMASAYVRSK----GAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 207 -------k~Iv~yCtgGiR~~~a~~~L~~~----~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
++||+||.+|.||..|+.+|++. +.||.||++|.|||.+|.++..
T Consensus 66 ~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~ 121 (127)
T 3i2v_A 66 GTQEGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKID 121 (127)
T ss_dssp TC---CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTC
T ss_pred cccCCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcC
Confidence 49999999999999999999987 2369999999999999998754
|
| >3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1} | Back alignment and structure |
|---|
Probab=99.68 E-value=8e-17 Score=141.27 Aligned_cols=93 Identities=24% Similarity=0.415 Sum_probs=77.5
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.|+++|+.++++ +++|||||++.||+.|||+| +++.+. .++...+ .+.+++++|
T Consensus 4 ~~is~~el~~~l~---------------~~~iiDvR~~~e~~~ghIpg----A~~ip~---~~l~~~~---~~l~~~~~i 58 (108)
T 3gk5_A 4 RSINAADLYENIK---------------AYTVLDVREPFELIFGSIAN----SINIPI---SELREKW---KILERDKKY 58 (108)
T ss_dssp CEECHHHHHHTTT---------------TCEEEECSCHHHHTTCBCTT----CEECCH---HHHHHHG---GGSCTTSCE
T ss_pred cEeCHHHHHHHHc---------------CCEEEECCCHHHHhcCcCCC----CEEcCH---HHHHHHH---HhCCCCCeE
Confidence 5789999998873 28999999999999999999 555542 2333333 234689999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
|+||.+|.||.+|+.+|+++ || |||+|.|||.+|.++.
T Consensus 59 vvyC~~G~rs~~aa~~L~~~--G~-~v~~l~GG~~~W~~~~ 96 (108)
T 3gk5_A 59 AVICAHGNRSAAAVEFLSQL--GL-NIVDVEGGIQSWIEEG 96 (108)
T ss_dssp EEECSSSHHHHHHHHHHHTT--TC-CEEEETTHHHHHHHTT
T ss_pred EEEcCCCcHHHHHHHHHHHc--CC-CEEEEcCcHHHHHHcC
Confidence 99999999999999999987 99 9999999999999874
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.67 E-value=7.3e-16 Score=154.98 Aligned_cols=172 Identities=17% Similarity=0.246 Sum_probs=124.0
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
..++|||+||+|++...|. .+...|.+.++++.+|.| ... .++.
T Consensus 14 ~~~~vvllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G-----------------------~S~~- 57 (268)
T 3v48_A 14 DAPVVVLISGLGGSGSYWL----PQLAVLEQEYQVVCYDQR--------GTG-----------------------NNPD- 57 (268)
T ss_dssp TCCEEEEECCTTCCGGGGH----HHHHHHHTTSEEEECCCT--------TBT-----------------------TBCC-
T ss_pred CCCEEEEeCCCCccHHHHH----HHHHHHhhcCeEEEECCC--------CCC-----------------------CCCC-
Confidence 4578999999999999999 555556667999999988 110 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.. .....+++..+.+.++++..+ ....|+||||||++|+.+|.++ +..++++|++
T Consensus 58 -------------~~------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~-----p~~v~~lvl~ 113 (268)
T 3v48_A 58 -------------TL------AEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDY-----PASVTVLISV 113 (268)
T ss_dssp -------------CC------CTTCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEE
T ss_pred -------------Cc------cccCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhC-----hhhceEEEEe
Confidence 00 001245666777777777765 4458999999999999999854 6789999999
Q ss_pred cCCCCCcc------------------------------------c-----------------------------------
Q 007311 530 SGFALHSA------------------------------------E----------------------------------- 538 (608)
Q Consensus 530 sG~~~~~~------------------------------------~----------------------------------- 538 (608)
+++..... .
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 193 (268)
T 3v48_A 114 NGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFS 193 (268)
T ss_dssp SCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCT
T ss_pred ccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchh
Confidence 87643110 0
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.+++. ..++..++||.++.+.+ +.+.|.+||.+
T Consensus 194 ~~l~~i~~P~Lii~G~---~D~~~p~~~~~~l~~~~p~~-~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 259 (268)
T 3v48_A 194 HHADRIRCPVQIICAS---DDLLVPTACSSELHAALPDS-QKMVMPYGGHACNVTDPETFNALLLNGLAS 259 (268)
T ss_dssp TTGGGCCSCEEEEEET---TCSSSCTHHHHHHHHHCSSE-EEEEESSCCTTHHHHCHHHHHHHHHHHHHH
T ss_pred hhhhcCCCCeEEEEeC---CCcccCHHHHHHHHHhCCcC-eEEEeCCCCcchhhcCHHHHHHHHHHHHHH
Confidence 1135689999999999 89999999999999999873 33444567998765433 67788888875
|
| >3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-16 Score=145.74 Aligned_cols=106 Identities=21% Similarity=0.348 Sum_probs=82.4
Q ss_pred CCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCc----hHHHHhhh-
Q 007311 127 NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDL----PTWIDNNA- 201 (608)
Q Consensus 127 ~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~----~~~~~~~~- 201 (608)
.....|+++|+.+++++. +++++|||||++.||+.|||+| +++.+...+.+- +..+.+..
T Consensus 20 ~~~~~is~~el~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpg----Ainip~~~l~~~~~~~~~~~~~~~~ 84 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKH-----------DPNVVLVDVREPSEYSIVHIPA----SINVPYRSHPDAFALDPLEFEKQIG 84 (139)
T ss_dssp CCCEECCHHHHHHHHHHT-----------CTTEEEEECSCHHHHHHCCCTT----CEECCTTTCTTGGGSCHHHHHHHHS
T ss_pred CCcceecHHHHHHHHhCC-----------CCCeEEEECcCHHHHhCCCCCC----cEEcCHHHhhhhccCCHHHHHHHHh
Confidence 346789999999999751 1579999999999999999999 444443323211 11222211
Q ss_pred --hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 202 --EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 202 --~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
..+++++||+||.+|.||..|+.+|++. ||+|||.|.||+.+|.++
T Consensus 85 ~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 132 (139)
T 3d1p_A 85 IPKPDSAKELIFYCASGKRGGEAQKVASSH--GYSNTSLYPGSMNDWVSH 132 (139)
T ss_dssp SCCCCTTSEEEEECSSSHHHHHHHHHHHTT--TCCSEEECTTHHHHHHHT
T ss_pred ccCCCCCCeEEEECCCCchHHHHHHHHHHc--CCCCeEEeCCcHHHHHHc
Confidence 2468899999999999999999999987 999999999999999875
|
| >3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.6e-17 Score=142.27 Aligned_cols=94 Identities=22% Similarity=0.320 Sum_probs=68.9
Q ss_pred HHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcC
Q 007311 135 VEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCT 214 (608)
Q Consensus 135 ~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCt 214 (608)
+|++++|+.+ +++++|||||+..||+.|||+| +++.+. .++..++.. ...++++||+||.
T Consensus 1 eel~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpg----Ai~ip~---~~l~~~~~~--~l~~~~~ivvyc~ 60 (106)
T 3hix_A 1 MVLKSRLEWG-----------EPAFTILDVRDRSTYNDGHIMG----AMAMPI---EDLVDRASS--SLEKSRDIYVYGA 60 (106)
T ss_dssp -----------------------CCEEEECSCHHHHHTCEETT----CEECCG---GGHHHHHHH--HSCTTSCEEEECS
T ss_pred ChHHHHHHcC-----------CCCeEEEECCCHHHHhcCcCCC----CEeCCH---HHHHHHHHh--cCCCCCeEEEEEC
Confidence 3567777642 2579999999999999999999 555553 344443322 3468899999999
Q ss_pred CCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 215 GGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 215 gGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
+|.|+..|+..|++. ||+|||.|.|||.+|.++-
T Consensus 61 ~g~rs~~a~~~L~~~--G~~~v~~l~GG~~~W~~~g 94 (106)
T 3hix_A 61 GDEQTSQAVNLLRSA--GFEHVSELKGGLAAWKAIG 94 (106)
T ss_dssp SHHHHHHHHHHHHHT--TCSCEEECTTHHHHHHHTT
T ss_pred CCChHHHHHHHHHHc--CCcCEEEecCCHHHHHHCC
Confidence 999999999999997 9999999999999999863
|
| >2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-16 Score=146.61 Aligned_cols=101 Identities=23% Similarity=0.421 Sum_probs=80.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc-cccCCCCccccCcccccCCCchHHHHh-----hhh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI-GKFRTPSVETLDPEIRQFSDLPTWIDN-----NAE 202 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~-Gh~~g~~~~~l~~~~~~~~~~~~~~~~-----~~~ 202 (608)
...|+++|+.+++++. +++++|||||++.||+. |||+| +++.+. .++...++. ...
T Consensus 21 ~~~is~~~l~~~l~~~-----------~~~~~liDvR~~~e~~~~ghIpg----A~~ip~---~~l~~~~~~~~~~~~~~ 82 (139)
T 2hhg_A 21 IETLTTADAIALHKSG-----------ASDVVIVDIRDPREIERDGKIPG----SFSCTR---GMLEFWIDPQSPYAKPI 82 (139)
T ss_dssp SEEECHHHHHHHHHTT-----------CTTEEEEECSCHHHHHHHCCCTT----CEECCG---GGHHHHHCTTSTTCCGG
T ss_pred cCccCHHHHHHHHhcc-----------CCCeEEEECCCHHHHHhCCCCCC----eEECCh---HHHHHhcCccchhhhcc
Confidence 4679999999999731 15789999999999999 99999 555442 223322221 113
Q ss_pred hcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 203 QLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 203 ~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
..++++||+||.+|.||..|+.+|++. ||+|||+|.||+.+|.++
T Consensus 83 ~~~~~~ivvyC~~G~rs~~a~~~L~~~--G~~~v~~l~GG~~~W~~~ 127 (139)
T 2hhg_A 83 FQEDKKFVFYCAGGLRSALAAKTAQDM--GLKPVAHIEGGFGAWRDA 127 (139)
T ss_dssp GGSSSEEEEECSSSHHHHHHHHHHHHH--TCCSEEEETTHHHHHHHT
T ss_pred CCCCCeEEEECCCChHHHHHHHHHHHc--CCCCeEEecCCHHHHHHC
Confidence 468999999999999999999999998 999999999999999875
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.66 E-value=7.3e-16 Score=149.81 Aligned_cols=186 Identities=18% Similarity=0.161 Sum_probs=127.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||++||++++...|. .+.+.|.+++.++.+++...-. +...|+....
T Consensus 36 ~~~~~vv~~HG~~~~~~~~~----~~~~~l~~g~~v~~~~~d~~g~------------------------g~s~~~~~~~ 87 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNELDLL----PLAEIVDSEASVLSVRGNVLEN------------------------GMPRFFRRLA 87 (226)
T ss_dssp TTSCEEEEECCTTCCTTTTH----HHHHHHHTTSCEEEECCSEEET------------------------TEEESSCEEE
T ss_pred CCCcEEEEEecCCCChhHHH----HHHHHhccCceEEEecCcccCC------------------------cchhhccccC
Confidence 45688999999999999998 6666666678999996542100 1233433100
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.+.++ .......+.+..+++....... ....+|+||||||.+|+.++... +..++++
T Consensus 88 ------------~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~ 147 (226)
T 2h1i_A 88 ------------EGIFD---EEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHY-----ENALKGA 147 (226)
T ss_dssp ------------TTEEC---HHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHC-----TTSCSEE
T ss_pred ------------ccCcC---hhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhC-----hhhhCEE
Confidence 00011 0111222333444444433433 24568999999999999999843 4579999
Q ss_pred EEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 527 ILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 527 IlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
|+++++.+.........+++|+++++|+ +|.+++.+.++++.+.+... ...++..++||.++. +..+.+.+||
T Consensus 148 v~~~~~~~~~~~~~~~~~~~p~l~~~G~---~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~l 222 (226)
T 2h1i_A 148 VLHHPMVPRRGMQLANLAGKSVFIAAGT---NDPICSSAESEELKVLLENANANVTMHWENRGHQLTM--GEVEKAKEWY 222 (226)
T ss_dssp EEESCCCSCSSCCCCCCTTCEEEEEEES---SCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCCH--HHHHHHHHHH
T ss_pred EEeCCCCCcCccccccccCCcEEEEeCC---CCCcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCH--HHHHHHHHHH
Confidence 9999998766544455668999999999 89999999999999999853 234433456999854 7889999999
Q ss_pred HHhC
Q 007311 605 QRFL 608 (608)
Q Consensus 605 ~~~L 608 (608)
.++|
T Consensus 223 ~~~l 226 (226)
T 2h1i_A 223 DKAF 226 (226)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9876
|
| >3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=146.76 Aligned_cols=96 Identities=23% Similarity=0.322 Sum_probs=80.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
||++|+.++++++ +++++|||||+..||+.|||+| +++.+. .++..++.. ...++++||+
T Consensus 2 Is~~el~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpg----Ai~ip~---~~l~~~~~~--~l~~~~~ivv 61 (141)
T 3ilm_A 2 SDAHVLKSRLEWG-----------EPAFTILDVRDRSTYNDGHIMG----AMAMPI---EDLVDRASS--SLEKSRDIYV 61 (141)
T ss_dssp CCHHHHHHHHHHS-----------CSCEEEEECSCHHHHHHCEETT----CEECCG---GGHHHHHHT--TSCTTSEEEE
T ss_pred CCHHHHHHHHhcC-----------CCCEEEEECCCHHHHhCCCCCC----CEEcCH---HHHHHHHHh--cCCCCCeEEE
Confidence 7899999999863 2469999999999999999999 555552 344444322 3468899999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||.+|.||..|+.+|++. ||+|||.|.||+.+|.++
T Consensus 62 yC~~g~rs~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 97 (141)
T 3ilm_A 62 YGAGDEQTSQAVNLLRSA--GFEHVSELKGGLAAWKAI 97 (141)
T ss_dssp ECSSHHHHHHHHHHHHHT--TCCSEEECTTHHHHHHHT
T ss_pred EECCChHHHHHHHHHHHc--CCCCEEEecCHHHHHHHC
Confidence 999999999999999997 999999999999999875
|
| >1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-16 Score=143.88 Aligned_cols=105 Identities=18% Similarity=0.230 Sum_probs=81.6
Q ss_pred CCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCC-----CchHHHHh
Q 007311 125 VSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS-----DLPTWIDN 199 (608)
Q Consensus 125 ~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~-----~~~~~~~~ 199 (608)
.......|+++|+.++++. +++|||||++.||+.|||+| +++.+...+. .-++.++.
T Consensus 13 ~~~~~~~is~~e~~~~l~~--------------~~~lIDvR~~~e~~~ghIpg----Ainip~~~~~~~~~~~~~~~~~~ 74 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLLLA--------------GHRYLDVRTPEEFSQGHACG----AINVPYMNRGASGMSKNTDFLEQ 74 (129)
T ss_dssp CSCCCEEEEHHHHHHHHHH--------------TCCEEEESCHHHHHHCCBTT----BEECCSCCCSTTTCCCTTTHHHH
T ss_pred hcCCCcccCHHHHHHHhcC--------------CCEEEECCCHHHHhcCCCCC----cEECcHhhcccccccCCHHHHHH
Confidence 3445678999999999863 57899999999999999999 4544431110 00122222
Q ss_pred hh-hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 200 NA-EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 200 ~~-~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.. ..+++++||+||.+|.||..|+.+|++. ||+|||.|.|||.+|.++
T Consensus 75 ~~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 123 (129)
T 1tq1_A 75 VSSHFGQSDNIIVGCQSGGRSIKATTDLLHA--GFTGVKDIVGGYSAWAKN 123 (129)
T ss_dssp HTTTCCTTSSEEEEESSCSHHHHHHHHHHHH--HCCSEEEEECCHHHHHHH
T ss_pred HHhhCCCCCeEEEECCCCcHHHHHHHHHHHc--CCCCeEEeCCcHHHHHhC
Confidence 21 2468899999999999999999999998 999999999999999875
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=144.24 Aligned_cols=158 Identities=18% Similarity=0.188 Sum_probs=105.5
Q ss_pred cEEEEecCCCCChHHHHH-HHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKG-RTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~-~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
|+||+||||++++..++. .+..+.+.....++++.+|.|. +
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~-------------------------------~------- 44 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPP-------------------------------Y------- 44 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCS-------------------------------S-------
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCC-------------------------------C-------
Confidence 689999999999877653 3445545555568888887661 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
-+++.+.+...+... ....+|+|+||||.+|+.+|.+.+ .....++...
T Consensus 45 -------------------------g~~~~~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~-----~~~~~~~~~~ 94 (202)
T 4fle_A 45 -------------------------PAEAAEMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFS-----IPAVVVNPAV 94 (202)
T ss_dssp -------------------------HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTT-----CCEEEESCCS
T ss_pred -------------------------HHHHHHHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhc-----ccchheeecc
Confidence 012344455555543 356689999999999999998543 2333332222
Q ss_pred CCCCCccc----------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE
Q 007311 531 GFALHSAE----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII 582 (608)
Q Consensus 531 G~~~~~~~----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv 582 (608)
+....... .....+++|+|+|||+ +|.+||.+.+.+++ ++ ...++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~LiihG~---~D~~Vp~~~s~~l~---~~-~~l~i 167 (202)
T 4fle_A 95 RPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQIEKLESPDLLWLLQQT---GDEVLDYRQAVAYY---TP-CRQTV 167 (202)
T ss_dssp SHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTCCSSCSCGGGEEEEEET---TCSSSCHHHHHHHT---TT-SEEEE
T ss_pred chHHHHHHhhhhhccccccccccchHHHHHHHHhhhhhhhccCceEEEEEeC---CCCCCCHHHHHHHh---hC-CEEEE
Confidence 21111000 1245788999999999 89999998887664 44 24555
Q ss_pred EeCCCCcCCCChhhHHHHHHHHH
Q 007311 583 EHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 583 ~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
..++||.+...+++.++|.+||+
T Consensus 168 ~~g~~H~~~~~~~~~~~I~~FL~ 190 (202)
T 4fle_A 168 ESGGNHAFVGFDHYFSPIVTFLG 190 (202)
T ss_dssp ESSCCTTCTTGGGGHHHHHHHHT
T ss_pred ECCCCcCCCCHHHHHHHHHHHHh
Confidence 56679988665678999999996
|
| >1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.4e-17 Score=137.06 Aligned_cols=92 Identities=17% Similarity=0.311 Sum_probs=70.9
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.|+++|+.+++++ +++|||||++.||+.|||+| +++.+...+ ...+ .+.++ ++|
T Consensus 2 ~~is~~~l~~~~~~--------------~~~liDvR~~~e~~~ghi~g----Ai~ip~~~l---~~~~---~~l~~-~~i 56 (94)
T 1wv9_A 2 RKVRPEELPALLEE--------------GVLVVDVRPADRRSTPLPFA----AEWVPLEKI---QKGE---HGLPR-RPL 56 (94)
T ss_dssp CEECGGGHHHHHHT--------------TCEEEECCCC--CCSCCSSC----CEECCHHHH---TTTC---CCCCS-SCE
T ss_pred CcCCHHHHHHHHHC--------------CCEEEECCCHHHHhcccCCC----CEECCHHHH---HHHH---HhCCC-CCE
Confidence 35899999999863 58999999999999999999 555543222 2111 22357 999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||.+|.||.+|+..|++. ||+ ||+|.||+.+|.++
T Consensus 57 vvyC~~g~rs~~a~~~L~~~--G~~-v~~l~GG~~~W~~~ 93 (94)
T 1wv9_A 57 LLVCEKGLLSQVAALYLEAE--GYE-AMSLEGGLQALTQG 93 (94)
T ss_dssp EEECSSSHHHHHHHHHHHHH--TCC-EEEETTGGGCC---
T ss_pred EEEcCCCChHHHHHHHHHHc--CCc-EEEEcccHHHHHhC
Confidence 99999999999999999998 998 99999999999753
|
| >3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A | Back alignment and structure |
|---|
Probab=99.62 E-value=8e-16 Score=138.25 Aligned_cols=96 Identities=23% Similarity=0.271 Sum_probs=79.2
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-hccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-RIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
..|+++|+.++++++ +++++|||||++.|| +.|||+| +++.+. .++..++ .+.+++++
T Consensus 15 ~~is~~el~~~l~~~-----------~~~~~liDvR~~~e~~~~ghIpg----A~nip~---~~l~~~~---~~l~~~~~ 73 (124)
T 3flh_A 15 LYIDHHTVLADMQNA-----------TGKYVVLDVRNAPAQVKKDQIKG----AIAMPA---KDLATRI---GELDPAKT 73 (124)
T ss_dssp TEECHHHHHHHHHHT-----------CCCEEEEECCCSCHHHHCCEETT----CEECCH---HHHHHHG---GGSCTTSE
T ss_pred ceecHHHHHHHHHcC-----------CCCEEEEECCCHHHHHhcCcCCC----CEECCH---HHHHHHH---hcCCCCCe
Confidence 468999999999863 135999999999998 9999999 565552 2233333 23568999
Q ss_pred EEEEcCCCcc--HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIR--CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR--~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.| +.+|+..|++. ||+ |++|.|||.+|.++
T Consensus 74 ivvyC~~g~r~~s~~a~~~L~~~--G~~-v~~l~GG~~~W~~~ 113 (124)
T 3flh_A 74 YVVYDWTGGTTLGKTALLVLLSA--GFE-AYELAGALEGWKGM 113 (124)
T ss_dssp EEEECSSSSCSHHHHHHHHHHHH--TCE-EEEETTHHHHHHHT
T ss_pred EEEEeCCCCchHHHHHHHHHHHc--CCe-EEEeCCcHHHHHHc
Confidence 9999999999 89999999998 996 99999999999986
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.9e-15 Score=149.04 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=120.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++.|||+||+|.+...|..++ ..|.+.++++.+|.| .+. . + .. +
T Consensus 27 ~p~lvl~hG~~~~~~~w~~~~----~~L~~~~~vi~~D~r--------G~G------~-------S-----~~---~--- 70 (266)
T 3om8_A 27 KPLLALSNSIGTTLHMWDAQL----PALTRHFRVLRYDAR--------GHG------A-------S-----SV---P--- 70 (266)
T ss_dssp SCEEEEECCTTCCGGGGGGGH----HHHHTTCEEEEECCT--------TST------T-------S-----CC---C---
T ss_pred CCEEEEeCCCccCHHHHHHHH----HHhhcCcEEEEEcCC--------CCC------C-------C-----CC---C---
Confidence 568999999999999999444 455557999999988 110 0 0 00 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
. ....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+++
T Consensus 71 ----------~----------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~-----P~rv~~lvl~~ 125 (266)
T 3om8_A 71 ----------P----------GPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHA-----PQRIERLVLAN 125 (266)
T ss_dssp ----------C----------SCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred ----------C----------CCCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhC-----hHhhheeeEec
Confidence 0 01235566677777777765 4558999999999999999854 56799999987
Q ss_pred CCCCCcc--------------c------------------------------------------------------cccC
Q 007311 531 GFALHSA--------------E------------------------------------------------------FEHR 542 (608)
Q Consensus 531 G~~~~~~--------------~------------------------------------------------------~~~~ 542 (608)
+...... . ....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 205 (266)
T 3om8_A 126 TSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLA 205 (266)
T ss_dssp CCSBCCCSHHHHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGG
T ss_pred CcccCCchhHHHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhc
Confidence 6431100 0 1235
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.+++|+|+|+|+ +|.++|.+.++++++.+++ .++++.++||.++.+.+ +.+.|.+||.
T Consensus 206 ~i~~P~Lvi~G~---~D~~~~~~~~~~l~~~ip~--a~~~~i~~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 206 RIERPTLVIAGA---YDTVTAASHGELIAASIAG--ARLVTLPAVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp GCCSCEEEEEET---TCSSSCHHHHHHHHHHSTT--CEEEEESCCSCHHHHCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCccccCHHHHHHHHHHHhc
Confidence 789999999999 8999999999999999987 45555578998765432 5667777764
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=135.59 Aligned_cols=169 Identities=17% Similarity=0.058 Sum_probs=113.5
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||++++...|. ...+.+.|. .++.++.+|.|-. . .....
T Consensus 3 ~~~~vv~~HG~~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~--------g-------------------~s~~~--- 50 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALK--VTALAEVAERLGWTHERPDFTDL--------D-------------------ARRDL--- 50 (176)
T ss_dssp SSCEEEEECCTTCCTTSHH--HHHHHHHHHHTTCEEECCCCHHH--------H-------------------TCGGG---
T ss_pred CCcEEEEEeCCCCCccHHH--HHHHHHHHHHCCCEEEEeCCCCC--------C-------------------CCCCC---
Confidence 4578999999999987544 224555554 3689999987610 0 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. ....+.+.++.+.+.+... ....+|+||||||.+|+.++.+. + ++++|
T Consensus 51 ---------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----~--~~~~v 101 (176)
T 2qjw_A 51 ---------------G-------QLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQV-----P--TRALF 101 (176)
T ss_dssp ---------------C-------TTCCHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTS-----C--CSEEE
T ss_pred ---------------C-------CCCCHHHHHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhc-----C--hhheE
Confidence 0 0112334444444444433 23568999999999999998732 2 99999
Q ss_pred EecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh-hHHHHHHHHHH
Q 007311 528 LCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP-YIDEIKSFLQR 606 (608)
Q Consensus 528 lisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~-~~~~i~~Fl~~ 606 (608)
+++++...........+++|+|+++|+ +|.++|.+.++++.+.+ + .+++.+++||.+....+ ..+.+.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~-~--~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 102 LMVPPTKMGPLPALDAAAVPISIVHAW---HDELIPAADVIAWAQAR-S--ARLLLVDDGHRLGAHVQAASRAFAELLQS 175 (176)
T ss_dssp EESCCSCBTTBCCCCCCSSCEEEEEET---TCSSSCHHHHHHHHHHH-T--CEEEEESSCTTCTTCHHHHHHHHHHHHHT
T ss_pred EECCcCCccccCcccccCCCEEEEEcC---CCCccCHHHHHHHHHhC-C--ceEEEeCCCccccccHHHHHHHHHHHHHh
Confidence 999877654322356789999999999 89999999999999887 3 44444488999854432 56666777654
|
| >3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.2e-16 Score=139.50 Aligned_cols=99 Identities=21% Similarity=0.317 Sum_probs=75.0
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCC------------------
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS------------------ 191 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~------------------ 191 (608)
+.|+++|+.+ . ++++|||||++.||+.|||+| +++.+...+.
T Consensus 5 ~~i~~~el~~---~-------------~~~~iiDvR~~~e~~~ghIpg----A~nip~~~~~~~~~~~~~~~~~~~~~~~ 64 (134)
T 3g5j_A 5 SVIKIEKALK---L-------------DKVIFVDVRTEGEYEEDHILN----AINMPLFKNNEHNEVGTIYKMQGKHEAI 64 (134)
T ss_dssp CEECHHHHTT---C-------------TTEEEEECSCHHHHHHCCCTT----CEECCSSCHHHHHHHHHHHHHHCHHHHH
T ss_pred cccCHHHHHh---c-------------CCcEEEEcCCHHHHhcCCCCC----CEEcCccchhhhhcccceeeecChhHHH
Confidence 5688888765 2 589999999999999999999 4444422110
Q ss_pred ---------CchHHHHhhhhhcCC-CeEEEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCC
Q 007311 192 ---------DLPTWIDNNAEQLQG-KHVLMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 192 ---------~~~~~~~~~~~~~k~-k~Iv~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
+++.......+..++ ++||+|| ++|.||.+|+..|++. || ||+.|.||+.+|.+.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~--G~-~v~~l~GG~~~W~~~~~ 132 (134)
T 3g5j_A 65 QKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSL--GV-NVYQLEGGYKAYRNFVL 132 (134)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHHHT--TC-CCEEETTHHHHHHHHHT
T ss_pred hcccccccccHHHHHHHHHHhccCCCeEEEEECCCChHHHHHHHHHHHc--CC-ceEEEeCcHHHHHHHhh
Confidence 011112222234677 9999999 6999999999999997 99 99999999999998754
|
| >2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.9e-16 Score=143.42 Aligned_cols=114 Identities=16% Similarity=0.238 Sum_probs=82.0
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc-ccc------CCCCccccCcccccC-----CCchHHH
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI-GKF------RTPSVETLDPEIRQF-----SDLPTWI 197 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~-Gh~------~g~~~~~l~~~~~~~-----~~~~~~~ 197 (608)
..|+++|+.+++++. ++++|||||++.||+. ||| +|+ ++.+.... .++...+
T Consensus 5 ~~is~~el~~~l~~~------------~~~~liDVR~~~e~~~~ghi~~~g~~pgA----v~ip~~~~~~~~~~~~~~~l 68 (148)
T 2fsx_A 5 GDITPLQAWEMLSDN------------PRAVLVDVRCEAEWRFVGVPDLSSLGREV----VYVEWATSDGTHNDNFLAEL 68 (148)
T ss_dssp EEECHHHHHHHHHHC------------TTCEEEECSCHHHHHHTCEECCGGGTCCC----EECCSBCTTSCBCTTHHHHH
T ss_pred ccCCHHHHHHHHhcC------------CCeEEEECCCHHHHHhcCCCccccCCCCc----EEeeeeccccccCHHHHHHH
Confidence 468999999999752 4789999999999997 999 884 44432221 1122333
Q ss_pred Hhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCCC--Ceeceeee
Q 007311 198 DNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPDG--GFFKGKNF 261 (608)
Q Consensus 198 ~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~~--~~~~G~~f 261 (608)
.+.+ ...++++||+||.+|.||.+|+.+|++. ||+|||+|.||+.+|.++.+.. .-|+...+
T Consensus 69 ~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~--G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~gl 135 (148)
T 2fsx_A 69 RDRIPADADQHERPVIFLCRSGNRSIGAAEVATEA--GITPAYNVLDGFEGHLDAEGHRGATGWRAVGL 135 (148)
T ss_dssp HHHCC-------CCEEEECSSSSTHHHHHHHHHHT--TCCSEEEETTTTTCCCCTTSCCCSSSTTTTTC
T ss_pred HHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHc--CCcceEEEcCChhhhhhhccccccccHHHcCC
Confidence 2211 2368899999999999999999999997 9999999999999998765432 23554433
|
| >1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A | Back alignment and structure |
|---|
Probab=99.61 E-value=7.2e-16 Score=140.43 Aligned_cols=102 Identities=18% Similarity=0.237 Sum_probs=76.2
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc-ccc------CCCCccccCcccccCCCchHHHHhhh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI-GKF------RTPSVETLDPEIRQFSDLPTWIDNNA 201 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~-Gh~------~g~~~~~l~~~~~~~~~~~~~~~~~~ 201 (608)
...|+++|+.+++++. ++++|||||++.||+. ||+ ++ +++.+...+ ..+.++++..
T Consensus 4 ~~~is~~e~~~~l~~~------------~~~~liDVR~~~E~~~~~~~~~~g~~~g----a~~ip~~~~-~~~~~~~~l~ 66 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTD------------DNAQLLDIRATADFRQVGSPNIKGLGKK----AVSTVYNGE-DKPGFLKKLS 66 (134)
T ss_dssp SCBCCHHHHHHHHHHC------------TTEEEEECSCHHHHHHTCEECCTTTSCC----CEECCCCGG-GHHHHHHHHH
T ss_pred CCccCHHHHHHHHHhC------------CCeEEEEcCCHHHHhhcCCCcccccCCc----eEEeecccc-cChhHHHHHH
Confidence 4579999999999742 5789999999999986 443 35 444442211 0122222221
Q ss_pred h---hcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccH---HHHHHh
Q 007311 202 E---QLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGI---QRYLEQ 249 (608)
Q Consensus 202 ~---~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi---~~w~~~ 249 (608)
. .+++++||+||.+|.||.+|+.+|+++ ||+|||+|.||| .+|.++
T Consensus 67 ~~~~~~~~~~ivv~C~sG~RS~~aa~~L~~~--G~~~v~~l~GG~~~~~~W~~~ 118 (134)
T 1vee_A 67 LKFKDPENTTLYILDKFDGNSELVAELVALN--GFKSAYAIKDGAEGPRGWLNS 118 (134)
T ss_dssp TTCSCGGGCEEEEECSSSTTHHHHHHHHHHH--TCSEEEECTTTTTSTTSSGGG
T ss_pred HHhCCCCCCEEEEEeCCCCcHHHHHHHHHHc--CCcceEEecCCccCCcchhhc
Confidence 1 268899999999999999999999998 999999999999 678765
|
| >3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=140.43 Aligned_cols=97 Identities=16% Similarity=0.272 Sum_probs=78.7
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
..|+++|+.++++++ .++++|||||++.||+.|||+| +++.+...+.+ . ......++++|
T Consensus 16 ~~is~~el~~~l~~~-----------~~~~~liDvR~~~ey~~ghIpg----Ainip~~~l~~--~---~~~~l~~~~~i 75 (144)
T 3nhv_A 16 YETDIADLSIDIKKG-----------YEGIIVVDVRDAEAYKECHIPT----AISIPGNKINE--D---TTKRLSKEKVI 75 (144)
T ss_dssp TEEEHHHHHHHHHTT-----------CCSEEEEECSCHHHHHHCBCTT----CEECCGGGCST--T---TTTTCCTTSEE
T ss_pred cccCHHHHHHHHHcC-----------CCCEEEEECcCHHHHhcCCCCC----CEECCHHHHhH--H---HHhhCCCCCeE
Confidence 468999999999862 2479999999999999999999 55555433321 1 11234689999
Q ss_pred EEEcCCC--ccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCTGG--IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCtgG--iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||.+| .|+.+|+.+|++. || +|+.|.|||.+|.++
T Consensus 76 vvyC~~g~~~rs~~aa~~L~~~--G~-~v~~l~GG~~~W~~~ 114 (144)
T 3nhv_A 76 ITYCWGPACNGATKAAAKFAQL--GF-RVKELIGGIEYWRKE 114 (144)
T ss_dssp EEECSCTTCCHHHHHHHHHHHT--TC-EEEEEESHHHHHHHT
T ss_pred EEEECCCCccHHHHHHHHHHHC--CC-eEEEeCCcHHHHHHC
Confidence 9999998 7999999999997 99 699999999999875
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=9.7e-15 Score=147.17 Aligned_cols=177 Identities=15% Similarity=0.178 Sum_probs=127.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++|||+||+|++...|. .+.+.|..+++++.+|.|- .. .. . .
T Consensus 50 ~~~~lvllHG~~~~~~~~~----~l~~~L~~~~~v~~~D~~G--------~G-------------------~S--~--~- 93 (280)
T 3qmv_A 50 APLRLVCFPYAGGTVSAFR----GWQERLGDEVAVVPVQLPG--------RG-------------------LR--L--R- 93 (280)
T ss_dssp CSEEEEEECCTTCCGGGGT----THHHHHCTTEEEEECCCTT--------SG-------------------GG--T--T-
T ss_pred CCceEEEECCCCCChHHHH----HHHHhcCCCceEEEEeCCC--------CC-------------------CC--C--C-
Confidence 3478999999999999999 7888888889999999881 00 00 0 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-C-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-G-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. ....++.+.++.+.+++... . ....|+||||||.+|+.+|.+.+... ......+|+
T Consensus 94 -------------~-------~~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~-~~~~~~l~l 152 (280)
T 3qmv_A 94 -------------E-------RPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRG-APRPRHLFV 152 (280)
T ss_dssp -------------S-------CCCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTT-CCCCSCEEE
T ss_pred -------------C-------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcC-CCCceEEEE
Confidence 0 01234666777777777765 2 34589999999999999999776421 122345666
Q ss_pred ecCCCCCccc----------------------------------------------------cccCCCCCCEEEEEcCCC
Q 007311 529 CSGFALHSAE----------------------------------------------------FEHRSINCPSLHIFGGDL 556 (608)
Q Consensus 529 isG~~~~~~~----------------------------------------------------~~~~~i~~PvL~i~G~~~ 556 (608)
++...|.... .....+++|+|+++|+
T Consensus 153 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~-- 230 (280)
T 3qmv_A 153 SGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAA-- 230 (280)
T ss_dssp ESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEE--
T ss_pred ECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhccccCCCceecCeEEEEec--
Confidence 6554432110 0125789999999999
Q ss_pred CCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 557 GNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 557 ~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+|.+++.+.++++.+.+... ..++..++||.....++..+++.+.|.+||
T Consensus 231 -~D~~~~~~~~~~~~~~~~~~-~~~~~~~ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 231 -ADPIATPEMVEAWRPYTTGS-FLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp -ECSSSCHHHHHTTGGGBSSC-EEEEEEEEETTGGGSSHHHHHHHHHHHTTC
T ss_pred -CCCCcChHHHHHHHHhcCCc-eEEEEecCCCeEEcCchhHHHHHHHHHhhC
Confidence 89999999999888887654 667777789998776677888888888876
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.5e-14 Score=139.51 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=120.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++||++||++++...|. .+.+.|..+++++.+|.| ... ....
T Consensus 23 ~~~vv~lHG~~~~~~~~~----~~~~~l~~~~~vi~~d~~--------G~G-----------------------~S~~-- 65 (262)
T 3r0v_A 23 GPPVVLVGGALSTRAGGA----PLAERLAPHFTVICYDRR--------GRG-----------------------DSGD-- 65 (262)
T ss_dssp SSEEEEECCTTCCGGGGH----HHHHHHTTTSEEEEECCT--------TST-----------------------TCCC--
T ss_pred CCcEEEECCCCcChHHHH----HHHHHHhcCcEEEEEecC--------CCc-----------------------CCCC--
Confidence 457999999999999998 777777778999999988 110 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
+ ....+++..+.+.++++..+....|+|||+||.+|+.+|.+ .+ .++++|++++
T Consensus 66 ---------------~-----~~~~~~~~~~~~~~~~~~l~~~~~l~G~S~Gg~ia~~~a~~-----~p-~v~~lvl~~~ 119 (262)
T 3r0v_A 66 ---------------T-----PPYAVEREIEDLAAIIDAAGGAAFVFGMSSGAGLSLLAAAS-----GL-PITRLAVFEP 119 (262)
T ss_dssp ---------------C-----SSCCHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHT-----TC-CEEEEEEECC
T ss_pred ---------------C-----CCCCHHHHHHHHHHHHHhcCCCeEEEEEcHHHHHHHHHHHh-----CC-CcceEEEEcC
Confidence 0 01135555666666666655556899999999999999984 35 8999999987
Q ss_pred CCCCccc-------------------------------------------------------------------------
Q 007311 532 FALHSAE------------------------------------------------------------------------- 538 (608)
Q Consensus 532 ~~~~~~~------------------------------------------------------------------------- 538 (608)
.......
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (262)
T 3r0v_A 120 PYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPT 199 (262)
T ss_dssp CCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCH
T ss_pred CcccccccchhhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCH
Confidence 6543200
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .++++.+ +||. .......+.|.+||++
T Consensus 200 ~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~-~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 200 ARFASISIPTLVMDGG---ASPAWIRHTAQELADTIPN--ARYVTLENQTHT-VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHTTCCSCEEEEECT---TCCHHHHHHHHHHHHHSTT--EEEEECCCSSSS-CCHHHHHHHHHHHHC-
T ss_pred HHcCcCCCCEEEEeec---CCCCCCHHHHHHHHHhCCC--CeEEEecCCCcc-cCHHHHHHHHHHHHhC
Confidence 0124679999999999 8999999999999999876 5666665 5994 3433467788888753
|
| >3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=9.2e-16 Score=150.93 Aligned_cols=120 Identities=13% Similarity=0.233 Sum_probs=83.7
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHh--hhhhcC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDN--NAEQLQ 205 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~--~~~~~k 205 (608)
..+.|+++++.++++... .+..++++|||||+++||+.|||+| +++.+... .+...+.. .....+
T Consensus 55 ~~~~Is~~eL~~~l~~~~-------~~~~~~~~lIDVR~~~Ey~~GHIpG----AinIP~~~--~l~~~l~~~~~~~~~~ 121 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKF-------QGLIEKFYVIDCRYPYEYLGGHIQG----ALNLYSQE--ELFNFFLKKPIVPLDT 121 (216)
T ss_dssp SSEEECHHHHHHHHTTTT-------TTTEEEEEEEECSCHHHHHTSEETT----CEECCSHH--HHHHHHTSSCCCCSST
T ss_pred CCCEeCHHHHHHHHhCCC-------ccccCCEEEEEeCcHHHHhcCCccC----CEECChHH--HHHHHHhhcccccccc
Confidence 357899999999997520 0001268999999999999999999 55554211 01122211 011223
Q ss_pred CCe--EEEEcC-CCccHHHHHHHHHhcC--------CCCCcEEEcCccHHHHHHhCCCCCeeceeeee
Q 007311 206 GKH--VLMYCT-GGIRCEMASAYVRSKG--------AGFENVFQLYGGIQRYLEQFPDGGFFKGKNFV 262 (608)
Q Consensus 206 ~k~--Iv~yCt-gGiR~~~a~~~L~~~~--------~Gf~nV~~L~GGi~~w~~~~~~~~~~~G~~fV 262 (608)
+++ ||+||. +|.|+.+|+.+|++.+ .||++||+|+|||.+|.+++++ +..+..||
T Consensus 122 ~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~--lcep~~y~ 187 (216)
T 3op3_A 122 QKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYME--LCEPQSYC 187 (216)
T ss_dssp TSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG--GEESSCBC
T ss_pred CCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcc--cccCCCCC
Confidence 554 999999 9999999999999752 2899999999999999998763 66665554
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-14 Score=141.18 Aligned_cols=176 Identities=18% Similarity=0.188 Sum_probs=124.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++|||+||+|++...|. .+.+.|...++++.+|.|- .. .....
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~----~~~~~l~~~~~v~~~d~~G--------~G-------------------~s~~~--- 63 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFF----PLAKALAPAVEVLAVQYPG--------RQ-------------------DRRHE--- 63 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGH----HHHHHHTTTEEEEEECCTT--------SG-------------------GGTTS---
T ss_pred CCCceEEEeCCCCCCchhHH----HHHHHhccCcEEEEecCCC--------CC-------------------CCCCC---
Confidence 45688999999999999999 7778887779999999871 00 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
....++.+.++.+.++++..+ ....|+|||+||.+|+.++.+.+. .....++++|+
T Consensus 64 ----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~-~~~~~v~~lvl 120 (267)
T 3fla_A 64 ----------------------PPVDSIGGLTNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPE-AGLPAPVHLFA 120 (267)
T ss_dssp ----------------------CCCCSHHHHHHHHHHHTGGGTTSCEEEEEETHHHHHHHHHHHHTTT-TTCCCCSEEEE
T ss_pred ----------------------CCCcCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHhhhh-hccccccEEEE
Confidence 001246677777888887654 345899999999999999986542 11124889999
Q ss_pred ecCCCCCccc----------------------------------------------------cccCCCCCCEEEEEcCCC
Q 007311 529 CSGFALHSAE----------------------------------------------------FEHRSINCPSLHIFGGDL 556 (608)
Q Consensus 529 isG~~~~~~~----------------------------------------------------~~~~~i~~PvL~i~G~~~ 556 (608)
+++..+.... .....+++|+|+++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~-- 198 (267)
T 3fla_A 121 SGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELLAMVLPAIRSDYRAVETYRHEPGRRVDCPVTVFTGD-- 198 (267)
T ss_dssp ESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTTCCBSSCEEEEEET--
T ss_pred CCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHHHHHHHHHHHHHHhhhcccccccCcCCCCEEEEecC--
Confidence 8877553210 0113689999999999
Q ss_pred CCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHHHHHHHHH
Q 007311 557 GNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 557 ~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
+|.++|.+.++++.+.+.+. .+++..++||.+..+. ...+.|.+||.+
T Consensus 199 -~D~~~~~~~~~~~~~~~~~~-~~~~~~~ggH~~~~~~~~~~~~~i~~fl~~ 248 (267)
T 3fla_A 199 -HDPRVSVGEARAWEEHTTGP-ADLRVLPGGHFFLVDQAAPMIATMTEKLAG 248 (267)
T ss_dssp -TCTTCCHHHHHGGGGGBSSC-EEEEEESSSTTHHHHTHHHHHHHHHHHTC-
T ss_pred -CCCCCCHHHHHHHHHhcCCC-ceEEEecCCceeeccCHHHHHHHHHHHhcc
Confidence 89999999999988888763 6777777799865421 245566666643
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.2e-14 Score=143.82 Aligned_cols=169 Identities=17% Similarity=0.188 Sum_probs=119.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||+|.+...|. .+.+.|.+.++++.+|.| .+. . + .. .
T Consensus 26 ~~~vvllHG~~~~~~~~~----~~~~~L~~~~~vi~~D~~--------G~G------~-------S-----~~-~----- 69 (266)
T 2xua_A 26 APWIVLSNSLGTDLSMWA----PQVAALSKHFRVLRYDTR--------GHG------H-------S-----EA-P----- 69 (266)
T ss_dssp CCEEEEECCTTCCGGGGG----GGHHHHHTTSEEEEECCT--------TST------T-------S-----CC-C-----
T ss_pred CCeEEEecCccCCHHHHH----HHHHHHhcCeEEEEecCC--------CCC------C-------C-----CC-C-----
Confidence 568999999999999999 555556566999999988 110 0 0 00 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
. ....+++.++.+.++++..+ ....|+||||||++|+.+|.++ +..++++|+++
T Consensus 70 ---------------~-----~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~-----p~~v~~lvl~~ 124 (266)
T 2xua_A 70 ---------------K-----GPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARH-----ADRIERVALCN 124 (266)
T ss_dssp ---------------S-----SCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred ---------------C-----CCCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhC-----hhhhheeEEec
Confidence 0 01235566677777777654 4458999999999999999854 45689999987
Q ss_pred CCCCCcc------------------------c-------------------------------------------cccCC
Q 007311 531 GFALHSA------------------------E-------------------------------------------FEHRS 543 (608)
Q Consensus 531 G~~~~~~------------------------~-------------------------------------------~~~~~ 543 (608)
+...... . .....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (266)
T 2xua_A 125 TAARIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPG 204 (266)
T ss_dssp CCSSCSCHHHHHHHHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGG
T ss_pred CCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhcc
Confidence 6532100 0 11346
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHHHHHHHHH
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
+++|+|+++|+ +|.++|.+.++++++.+++ .++++.++||.++.+. .+.+.|.+||.+
T Consensus 205 i~~P~lvi~G~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 205 IKVPALVISGT---HDLAATPAQGRELAQAIAG--ARYVELDASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp CCSCEEEEEET---TCSSSCHHHHHHHHHHSTT--CEEEEESCCSSHHHHTHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEcC---CCCcCCHHHHHHHHHhCCC--CEEEEecCCCCchhcCHHHHHHHHHHHHHh
Confidence 89999999999 8999999999999999886 4444444999976532 256777787753
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.2e-14 Score=135.11 Aligned_cols=120 Identities=20% Similarity=0.231 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----cccCCCCCCEEEEE
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----FEHRSINCPSLHIF 552 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----~~~~~i~~PvL~i~ 552 (608)
+++.++.+.++++..+....|+||||||.+|+.++.+ .+..++++|+++++...... .....+++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~P~lii~ 132 (191)
T 3bdv_A 58 LDRWVLAIRRELSVCTQPVILIGHSFGALAACHVVQQ-----GQEGIAGVMLVAPAEPMRFEIDDRIQASPLSVPTLTFA 132 (191)
T ss_dssp HHHHHHHHHHHHHTCSSCEEEEEETHHHHHHHHHHHT-----TCSSEEEEEEESCCCGGGGTCTTTSCSSCCSSCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEChHHHHHHHHHHh-----cCCCccEEEEECCCccccccCccccccccCCCCEEEEe
Confidence 4556666777776666666899999999999999984 35679999999998764422 23567899999999
Q ss_pred cCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCC-----ChhhHHHHHHHHHHh
Q 007311 553 GGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPT-----RSPYIDEIKSFLQRF 607 (608)
Q Consensus 553 G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~-----~~~~~~~i~~Fl~~~ 607 (608)
|+ +|+++|.+.++++++.+ + .++++. ++||.++. .++..+.|.+||.+.
T Consensus 133 g~---~D~~~~~~~~~~~~~~~-~--~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 133 SH---NDPLMSFTRAQYWAQAW-D--SELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp CS---SBTTBCHHHHHHHHHHH-T--CEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred cC---CCCcCCHHHHHHHHHhc-C--CcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 99 89999999999999887 3 555555 56999765 244567888888754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.5e-14 Score=139.21 Aligned_cols=179 Identities=18% Similarity=0.182 Sum_probs=117.9
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++||++||+|++...|. .+.+.|.. +++++.+|.|- .. . +....
T Consensus 40 ~~~~~vv~~hG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G--------~G------~-------s~~~~------- 87 (303)
T 3pe6_A 40 TPKALIFVSHGAGEHSGRYE----ELARMLMGLDLLVFAHDHVG--------HG------Q-------SEGER------- 87 (303)
T ss_dssp CCSEEEEEECCTTCCGGGGH----HHHHHHHHTTEEEEEECCTT--------ST------T-------SCSST-------
T ss_pred CCCeEEEEECCCCchhhHHH----HHHHHHHhCCCcEEEeCCCC--------CC------C-------CCCCC-------
Confidence 34678999999999999999 55555543 79999999871 00 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.....+....+++.+.++++. ... ....+|+|||+||.+|+.++.+. +..++++|
T Consensus 88 ----------------~~~~~~~~~~~d~~~~l~~l~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lv 143 (303)
T 3pe6_A 88 ----------------MVVSDFHVFVRDVLQHVDSMQ---KDYPGLPVFLLGHSMGGAIAILTAAER-----PGHFAGMV 143 (303)
T ss_dssp ----------------TCCSSTHHHHHHHHHHHHHHH---HHSTTCCEEEEEETHHHHHHHHHHHHS-----TTTCSEEE
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHHh---hccCCceEEEEEeCHHHHHHHHHHHhC-----cccccEEE
Confidence 000000011122222222222 221 23458999999999999999854 45799999
Q ss_pred EecCCCCCccc-------------------------------------------------------------------cc
Q 007311 528 LCSGFALHSAE-------------------------------------------------------------------FE 540 (608)
Q Consensus 528 lisG~~~~~~~-------------------------------------------------------------------~~ 540 (608)
+++++...... ..
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (303)
T 3pe6_A 144 LISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERA 223 (303)
T ss_dssp EESCSSSBCHHHHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred EECccccCchhccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHH
Confidence 99987543210 12
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh-----hHHHHHHHHHHh
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP-----YIDEIKSFLQRF 607 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~-----~~~~i~~Fl~~~ 607 (608)
...+++|+|+++|+ +|.+++.+.++++++.+.....++++.+ +||.+....+ .++.+.+||.+.
T Consensus 224 ~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~ 293 (303)
T 3pe6_A 224 LPKLTVPFLLLQGS---ADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 293 (303)
T ss_dssp GGGCCSCEEEEEET---TCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred hhcCCCCEEEEeeC---CCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhcc
Confidence 35679999999999 8999999999999999985336666665 4999776532 456677887764
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=6.7e-14 Score=138.81 Aligned_cols=170 Identities=16% Similarity=0.093 Sum_probs=113.4
Q ss_pred CccEEEEecCCCCC--hHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFRQN--ASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G~n--a~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.++.||++||++++ ...|. .+.+.|. .+++++.+|.| .+. . +.... .
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~----~~~~~l~~~g~~vi~~D~~--------G~G------~-------S~~~~-~---- 75 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIV----AVQETLNEIGVATLRADMY--------GHG------K-------SDGKF-E---- 75 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHH----HHHHHHHHTTCEEEEECCT--------TST------T-------SSSCG-G----
T ss_pred CCCEEEEEcCCCcccccccHH----HHHHHHHHCCCEEEEecCC--------CCC------C-------CCCcc-c----
Confidence 45789999999999 88888 5555554 47999999987 110 0 00000 0
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHH---HHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK---TIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~---~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
...+...++.+. +.+.+.. ....|+||||||.+|+.+|.+. +..
T Consensus 76 --------------------------~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~ 124 (251)
T 2wtm_A 76 --------------------------DHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAME-----RDI 124 (251)
T ss_dssp --------------------------GCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHT-----TTT
T ss_pred --------------------------cCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhC-----ccc
Confidence 001222222222 3332221 2457999999999999999854 456
Q ss_pred ccEEEEecCCCCCc------------------cc------------------------cccCCCCCCEEEEEcCCCCCCc
Q 007311 523 FRFAILCSGFALHS------------------AE------------------------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 523 l~~vIlisG~~~~~------------------~~------------------------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
++++|++++..... .. .....+++|+|++||+ +|.
T Consensus 125 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~---~D~ 201 (251)
T 2wtm_A 125 IKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGD---QDE 201 (251)
T ss_dssp EEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEET---TCS
T ss_pred ceEEEEECcHHHhHHHHhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeC---CCC
Confidence 99999998753110 00 0123578999999999 899
Q ss_pred ccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHHHHh
Q 007311 561 QVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl~~~ 607 (608)
++|.+.++++++.+++ .++++.+ +||.+ .+.+ ..+.|.+||.+.
T Consensus 202 ~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 202 AVPYEASVAFSKQYKN--CKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp SSCHHHHHHHHHHSSS--EEEEEETTCCTTC-TTTHHHHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHhCCC--cEEEEECCCCccc-chhHHHHHHHHHHHHHHh
Confidence 9999999999998865 6666555 59998 5432 678899998764
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=141.67 Aligned_cols=171 Identities=12% Similarity=0.155 Sum_probs=121.6
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++|||+||++++...|. .+.+.|.+ +++++.+|.| ... . +..+ .
T Consensus 5 ~~vv~lHG~~~~~~~~~----~~~~~l~~~g~~vi~~D~~--------G~G------~-------S~~~-----~----- 49 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWY----KLKPLLESAGHRVTAVELA--------ASG------I-------DPRP-----I----- 49 (258)
T ss_dssp CEEEEECCTTCCGGGGT----THHHHHHHTTCEEEEECCT--------TST------T-------CSSC-----G-----
T ss_pred CcEEEECCCCCccccHH----HHHHHHHhCCCEEEEecCC--------CCc------C-------CCCC-----C-----
Confidence 67999999999999999 44444543 6999999988 110 0 0000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+.+.++.+.++++..+ ....|+|||+||.+|+.+|.++ +..++++|++
T Consensus 50 --------------------~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~ 104 (258)
T 3dqz_A 50 --------------------QAVETVDEYSKPLIETLKSLPENEEVILVGFSFGGINIALAADIF-----PAKIKVLVFL 104 (258)
T ss_dssp --------------------GGCCSHHHHHHHHHHHHHTSCTTCCEEEEEETTHHHHHHHHHTTC-----GGGEEEEEEE
T ss_pred --------------------CccccHHHhHHHHHHHHHHhcccCceEEEEeChhHHHHHHHHHhC-----hHhhcEEEEe
Confidence 011346667777777777653 4558999999999999999843 4579999999
Q ss_pred cCCCCCccc-----------------------------------------------------------------------
Q 007311 530 SGFALHSAE----------------------------------------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~~~----------------------------------------------------------------------- 538 (608)
+++.+....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (258)
T 3dqz_A 105 NAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDL 184 (258)
T ss_dssp SCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHH
T ss_pred cCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhh
Confidence 986543210
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHhC
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRFL 608 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~L 608 (608)
......++|+|+++|+ +|.++|.+.++++++.+++ .++++. ++||.+..+. ...+.|.+|++++|
T Consensus 185 ~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 185 SKKEKFSEEGYGSVQRVYVMSS---EDKAIPCDFIRWMIDNFNV--SKVYEIDGGDHMVMLSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HTSCCCCTTTGGGSCEEEEEET---TCSSSCHHHHHHHHHHSCC--SCEEEETTCCSCHHHHSHHHHHHHHHHHHHHTC
T ss_pred hccccccccccccCCEEEEECC---CCeeeCHHHHHHHHHhCCc--ccEEEcCCCCCchhhcChHHHHHHHHHHHHHhC
Confidence 0011235899999999 8999999999999999977 344455 4799865532 36788899998875
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=137.58 Aligned_cols=163 Identities=17% Similarity=0.189 Sum_probs=113.5
Q ss_pred ccEEEEecCCCCChH-HHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 372 KLRILCLHGFRQNAS-SFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 372 ~~~iLlLHG~G~na~-~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++||++||+|++.. .|...+. ..| ..+++++.+|.| ...
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~-~~~---------------------------------- 45 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLK---KRLLADGVQADILNMP-NPL---------------------------------- 45 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHH---HHHHHTTCEEEEECCS-CTT----------------------------------
T ss_pred CCEEEEEcCCCCCcchhHHHHHH---HHHHhCCcEEEEecCC-CCC----------------------------------
Confidence 467999999999998 7885443 234 358999999987 100
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCC--CccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEI--DFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~--~l~~vI 527 (608)
...+...++.+.+.++.......|+||||||.+|+.++.+. +. .++++|
T Consensus 46 ------------------------~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----~~~~~v~~~v 96 (192)
T 1uxo_A 46 ------------------------QPRLEDWLDTLSLYQHTLHENTYLVAHSLGCPAILRFLEHL-----QLRAALGGII 96 (192)
T ss_dssp ------------------------SCCHHHHHHHHHTTGGGCCTTEEEEEETTHHHHHHHHHHTC-----CCSSCEEEEE
T ss_pred ------------------------CCCHHHHHHHHHHHHHhccCCEEEEEeCccHHHHHHHHHHh-----cccCCccEEE
Confidence 00234445555555555444558999999999999999843 45 799999
Q ss_pred EecCCCCCccc--------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCC
Q 007311 528 LCSGFALHSAE--------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPT 592 (608)
Q Consensus 528 lisG~~~~~~~--------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~ 592 (608)
+++++.+.... .....+.+|+|+++|+ +|.++|.+.++++++.+ + .+++.++ +||.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~-~--~~~~~~~~~gH~~~~ 170 (192)
T 1uxo_A 97 LVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASK---DDQIVPFSFSKDLAQQI-D--AALYEVQHGGHFLED 170 (192)
T ss_dssp EETCCSSCCTTCGGGGGGTCSCCCHHHHHHHEEEEEEEEET---TCSSSCHHHHHHHHHHT-T--CEEEEETTCTTSCGG
T ss_pred EeccCCCccccchhhhhhhhcCCCHHHHHhhcCCEEEEecC---CCCcCCHHHHHHHHHhc-C--ceEEEeCCCcCcccc
Confidence 99987653211 1123566799999999 89999999999999988 4 5555555 5998764
Q ss_pred Chh-hHHHHHHHHHHh
Q 007311 593 RSP-YIDEIKSFLQRF 607 (608)
Q Consensus 593 ~~~-~~~~i~~Fl~~~ 607 (608)
+.+ ...++.+||.++
T Consensus 171 ~~~~~~~~~~~~l~~~ 186 (192)
T 1uxo_A 171 EGFTSLPIVYDVLTSY 186 (192)
T ss_dssp GTCSCCHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHH
Confidence 322 334456666554
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=143.12 Aligned_cols=173 Identities=14% Similarity=0.121 Sum_probs=123.6
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||++++...|. .+.+.|.++++++.+|.|- .. ...+-.
T Consensus 28 ~~~vv~lHG~~~~~~~~~----~~~~~l~~g~~v~~~d~~G--------~G------------------~s~~~~----- 72 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQNMWR----FMLPELEKQFTVIVFDYVG--------SG------------------QSDLES----- 72 (282)
T ss_dssp SCEEEEECCTTCCGGGGT----TTHHHHHTTSEEEECCCTT--------ST------------------TSCGGG-----
T ss_pred CCeEEEECCCCCCcchHH----HHHHHHhcCceEEEEecCC--------CC------------------CCCCCC-----
Confidence 378999999999999998 6666666689999999871 00 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.+. .....+++..+.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 73 -------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~ 130 (282)
T 3qvm_A 73 -------------FST----KRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHV-----GDRISDITMIC 130 (282)
T ss_dssp -------------CCT----TGGGSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHH-----GGGEEEEEEES
T ss_pred -------------CCc----cccccHHHHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhC-----chhhheEEEec
Confidence 000 011246666777777777654 4568999999999999999865 34699999999
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+.......
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (282)
T 3qvm_A 131 PSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDY 210 (282)
T ss_dssp CCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBC
T ss_pred CcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccH
Confidence 86532110
Q ss_pred -cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 -FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 -~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.++++.+.+++ .+++.. ++||.+..+. ...+.|.+||++
T Consensus 211 ~~~~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 277 (282)
T 3qvm_A 211 RSLLEDISTPALIFQSA---KDSLASPEVGQYMAENIPN--SQLELIQAEGHCLHMTDAGLITPLLIHFIQN 277 (282)
T ss_dssp GGGGGGCCSCEEEEEEE---ECTTCCHHHHHHHHHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeC---CCCcCCHHHHHHHHHhCCC--CcEEEecCCCCcccccCHHHHHHHHHHHHHh
Confidence 1235789999999999 8999999999999999876 555555 5699865432 357788888875
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-14 Score=141.17 Aligned_cols=175 Identities=15% Similarity=0.110 Sum_probs=122.7
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++|||+||++.+...|. .+.+.|.++++++.+|.|- .. . +. . ..++
T Consensus 19 ~~p~vv~~HG~~~~~~~~~----~~~~~l~~g~~v~~~D~~G--------~G------~-------S~--~-~~~~---- 66 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSAWN----RILPFFLRDYRVVLYDLVC--------AG------S-------VN--P-DFFD---- 66 (269)
T ss_dssp CSSEEEEECCTTCCGGGGT----TTGGGGTTTCEEEEECCTT--------ST------T-------SC--G-GGCC----
T ss_pred CCCEEEEEeCCCCcHHHHH----HHHHHHhCCcEEEEEcCCC--------CC------C-------CC--C-CCCC----
Confidence 4468999999999999998 7777787789999999881 00 0 00 0 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.. ....+++.++.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|++
T Consensus 67 ----------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~-----p~~v~~lvl~ 121 (269)
T 4dnp_A 67 ----------------FR----RYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRR-----PELFSKLILI 121 (269)
T ss_dssp ----------------TT----TCSSSHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEE
T ss_pred ----------------cc----ccCcHHHHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhC-----cHhhceeEEe
Confidence 00 01134556666777776654 4568999999999999999853 5679999999
Q ss_pred cCCCCCccc-----------------------------------------------------------------------
Q 007311 530 SGFALHSAE----------------------------------------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~~~----------------------------------------------------------------------- 538 (608)
++.......
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (269)
T 4dnp_A 122 GASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMR 201 (269)
T ss_dssp SCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCG
T ss_pred CCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhH
Confidence 986532100
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++. .+++.. ++||.+..+. ...+.|.+||++
T Consensus 202 ~~~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 202 GVLGLVKVPCHIFQTA---RDHSVPASVATYLKNHLGGK-NTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp GGGGGCCSCEEEEEEE---SBTTBCHHHHHHHHHHSSSC-EEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred hhhccccCCEEEEecC---CCcccCHHHHHHHHHhCCCC-ceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 1234679999999999 89999999999999999874 455555 4699865432 256677777754
|
| >2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A | Back alignment and structure |
|---|
Probab=99.57 E-value=8.1e-16 Score=128.62 Aligned_cols=80 Identities=16% Similarity=0.267 Sum_probs=65.9
Q ss_pred CcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEE
Q 007311 158 KLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVF 237 (608)
Q Consensus 158 ~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~ 237 (608)
+++|||||++.||+.|||+| +++.+. .++..++.+ +..+++++||+||.+|.||..|+.+|++. ||+|||
T Consensus 1 ~~~liDvR~~~e~~~ghIpg----A~~ip~---~~l~~~~~~-l~~~~~~~ivv~C~~g~rs~~aa~~L~~~--G~~~v~ 70 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQG----AINIPL---KEVKERIAT-AVPDKNDTVKVYCNAGRQSGQAKEILSEM--GYTHVE 70 (85)
T ss_dssp CEEEEECSCHHHHTTEEETT----CEECCH---HHHHHHHHH-HCCCTTSEEEEEESSSHHHHHHHHHHHHT--TCSSEE
T ss_pred CCEEEECCCHHHHHhCCCCC----CEEcCH---HHHHHHHHH-hCCCCCCcEEEEcCCCchHHHHHHHHHHc--CCCCEE
Confidence 46899999999999999999 565553 234444443 22368999999999999999999999997 999999
Q ss_pred EcCccHHHHHH
Q 007311 238 QLYGGIQRYLE 248 (608)
Q Consensus 238 ~L~GGi~~w~~ 248 (608)
.| ||+.+|..
T Consensus 71 ~l-GG~~~w~~ 80 (85)
T 2jtq_A 71 NA-GGLKDIAM 80 (85)
T ss_dssp EE-EETTTCCS
T ss_pred ec-cCHHHHhc
Confidence 99 99999964
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3.8e-14 Score=140.75 Aligned_cols=172 Identities=15% Similarity=0.128 Sum_probs=114.4
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.||||||++++...|. .+.+.|. .+++++.+|.| .+. . +..+. .
T Consensus 17 ~~vvllHG~~~~~~~~~----~~~~~L~~~g~~vi~~D~~--------GhG------~-------s~~~~----~----- 62 (247)
T 1tqh_A 17 RAVLLLHGFTGNSADVR----MLGRFLESKGYTCHAPIYK--------GHG------V-------PPEEL----V----- 62 (247)
T ss_dssp CEEEEECCTTCCTHHHH----HHHHHHHHTTCEEEECCCT--------TSS------S-------CHHHH----T-----
T ss_pred cEEEEECCCCCChHHHH----HHHHHHHHCCCEEEecccC--------CCC------C-------CHHHh----c-----
Confidence 57999999999999999 5556664 47999999988 110 0 00000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.+ ..+.+.+.+..+.+.++..+ ....|+||||||++|+.+|.+ .+ ++++|+++
T Consensus 63 ------------~~-------~~~~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~-----~p--v~~lvl~~ 116 (247)
T 1tqh_A 63 ------------HT-------GPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYT-----VP--IEGIVTMC 116 (247)
T ss_dssp ------------TC-------CHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTT-----SC--CSCEEEES
T ss_pred ------------CC-------CHHHHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHh-----CC--CCeEEEEc
Confidence 00 01122222333344454443 455899999999999999973 23 88888776
Q ss_pred CCCCCc-c--------------------------------------------------ccccCCCCCCEEEEEcCCCCCC
Q 007311 531 GFALHS-A--------------------------------------------------EFEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 531 G~~~~~-~--------------------------------------------------~~~~~~i~~PvL~i~G~~~~~D 559 (608)
+..... . ......+++|+|+|||+ +|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~---~D 193 (247)
T 1tqh_A 117 APMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQAR---HD 193 (247)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEET---TC
T ss_pred ceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecC---CC
Confidence 533210 0 01235689999999999 89
Q ss_pred cccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCC---hhhHHHHHHHHHHh
Q 007311 560 RQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTR---SPYIDEIKSFLQRF 607 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~---~~~~~~i~~Fl~~~ 607 (608)
+++|.+.++++++.+++...++++. ++||.++.+ ..+.+.|.+||.+.
T Consensus 194 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 194 EMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp SSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 9999999999999987633555555 569997653 24678899999763
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-13 Score=136.42 Aligned_cols=176 Identities=12% Similarity=0.098 Sum_probs=117.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||++++...|... .+.+.| ..+++++.+|.|- .. . ....
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G--------~G------~-------------s~~~--- 83 (270)
T 3llc_A 36 ERPTCIWLGGYRSDMTGTKAL--EMDDLAASLGVGAIRFDYSG--------HG------A-------------SGGA--- 83 (270)
T ss_dssp TSCEEEEECCTTCCTTSHHHH--HHHHHHHHHTCEEEEECCTT--------ST------T-------------CCSC---
T ss_pred CCCeEEEECCCccccccchHH--HHHHHHHhCCCcEEEecccc--------CC------C-------------CCCc---
Confidence 467899999999997665421 344444 2479999999871 00 0 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCC---CCccE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGE---IDFRF 525 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~---~~l~~ 525 (608)
.....+++.++.+..+++... ...+|+|||+||.+|+.++.+.. ..+ ..+++
T Consensus 84 ----------------------~~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~--~~p~~~~~v~~ 139 (270)
T 3llc_A 84 ----------------------FRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELK--ARHDNPTQVSG 139 (270)
T ss_dssp ----------------------GGGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHH--TCSCCSCEEEE
T ss_pred ----------------------cccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHH--hccccccccce
Confidence 001234555556666666543 45689999999999999998622 134 67999
Q ss_pred EEEecCCCCCccc-----------------------------------------------cccCCCCCCEEEEEcCCCCC
Q 007311 526 AILCSGFALHSAE-----------------------------------------------FEHRSINCPSLHIFGGDLGN 558 (608)
Q Consensus 526 vIlisG~~~~~~~-----------------------------------------------~~~~~i~~PvL~i~G~~~~~ 558 (608)
+|++++....... .....+++|+|+++|+ +
T Consensus 140 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~ 216 (270)
T 3llc_A 140 MVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGM---A 216 (270)
T ss_dssp EEEESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEET---T
T ss_pred eEEecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecC---C
Confidence 9999986542210 1235778999999999 8
Q ss_pred CcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh---hhHHHHHHHHH
Q 007311 559 DRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS---PYIDEIKSFLQ 605 (608)
Q Consensus 559 D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~---~~~~~i~~Fl~ 605 (608)
|.++|.+.++++.+.+.+...+++.++ +||.++... ...+.|.+||+
T Consensus 217 D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 267 (270)
T 3llc_A 217 DPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIE 267 (270)
T ss_dssp CSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhc
Confidence 999999999999999886446666665 699765421 13445555554
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.8e-14 Score=134.14 Aligned_cols=176 Identities=17% Similarity=0.175 Sum_probs=122.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||++++...|... .+.+.|.. ++.++.+|.|-. +..|.....
T Consensus 26 ~~~~vv~~hG~~~~~~~~~~~--~~~~~l~~~G~~v~~~d~~g~---------------------------g~s~~~~~~ 76 (207)
T 3bdi_A 26 NRRSIALFHGYSFTSMDWDKA--DLFNNYSKIGYNVYAPDYPGF---------------------------GRSASSEKY 76 (207)
T ss_dssp CCEEEEEECCTTCCGGGGGGG--THHHHHHTTTEEEEEECCTTS---------------------------TTSCCCTTT
T ss_pred CCCeEEEECCCCCCccccchH--HHHHHHHhCCCeEEEEcCCcc---------------------------cccCcccCC
Confidence 456899999999999999830 06666654 599999997710 011110000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. .....+++..+.+..+++..+ ...+++|||+||.+|+.++.+. +..++++|+
T Consensus 77 ------------~---------~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~v~ 130 (207)
T 3bdi_A 77 ------------G---------IDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQY-----PDIVDGIIA 130 (207)
T ss_dssp ------------C---------CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred ------------C---------CCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhC-----chhheEEEE
Confidence 0 001145566666666666654 4558999999999999999854 346999999
Q ss_pred ecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC--hhhHHHHHHHHH
Q 007311 529 CSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR--SPYIDEIKSFLQ 605 (608)
Q Consensus 529 isG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~--~~~~~~i~~Fl~ 605 (608)
+++............+++|+++++|+ +|..++.+.++++.+.+++ .+++.++ +||.+..+ ....+.|.+||+
T Consensus 131 ~~~~~~~~~~~~~~~~~~p~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~ 205 (207)
T 3bdi_A 131 VAPAWVESLKGDMKKIRQKTLLVWGS---KDHVVPIALSKEYASIISG--SRLEIVEGSGHPVYIEKPEEFVRITVDFLR 205 (207)
T ss_dssp ESCCSCGGGHHHHTTCCSCEEEEEET---TCTTTTHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred eCCccccchhHHHhhccCCEEEEEEC---CCCccchHHHHHHHHhcCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHh
Confidence 99874433233456788999999999 8999999999999998865 5666665 49986432 235677788876
Q ss_pred H
Q 007311 606 R 606 (608)
Q Consensus 606 ~ 606 (608)
+
T Consensus 206 ~ 206 (207)
T 3bdi_A 206 N 206 (207)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.56 E-value=9.1e-14 Score=138.07 Aligned_cols=172 Identities=13% Similarity=0.112 Sum_probs=120.7
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||++||++++...|. .+.+.|. .++.++.+|.|- .. . +. . .
T Consensus 39 ~~~~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~G--------~G------~-------s~--~----~--- 84 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTPHSMR----PLAEAYAKAGYTVCLPRLKG--------HG------T-------HY--E----D--- 84 (270)
T ss_dssp SSEEEEEECCTTCCGGGTH----HHHHHHHHTTCEEEECCCTT--------CS------S-------CH--H----H---
T ss_pred CCeEEEEECCCCCChhHHH----HHHHHHHHCCCEEEEeCCCC--------CC------C-------Cc--c----c---
Confidence 4578999999999999998 5555554 369999999771 00 0 00 0 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.....+.+.++.+.++++.. ....+|+|||+||.+|+.+|.+. +. ++++
T Consensus 85 ----------------------~~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~~ 136 (270)
T 3rm3_A 85 ----------------------MERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHH-----PD-ICGI 136 (270)
T ss_dssp ----------------------HHTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHC-----TT-CCEE
T ss_pred ----------------------cccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhC-----CC-ccEE
Confidence 00112333334444444332 45568999999999999999853 34 9999
Q ss_pred EEecCCCCCccc--------------------------------------------------cccCCCCCCEEEEEcCCC
Q 007311 527 ILCSGFALHSAE--------------------------------------------------FEHRSINCPSLHIFGGDL 556 (608)
Q Consensus 527 IlisG~~~~~~~--------------------------------------------------~~~~~i~~PvL~i~G~~~ 556 (608)
|++++....... .....+++|+|+++|+
T Consensus 137 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~-- 214 (270)
T 3rm3_A 137 VPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSD-- 214 (270)
T ss_dssp EEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEET--
T ss_pred EEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECC--
Confidence 999986532110 1235678999999999
Q ss_pred CCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh---hhHHHHHHHHHHh
Q 007311 557 GNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS---PYIDEIKSFLQRF 607 (608)
Q Consensus 557 ~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~---~~~~~i~~Fl~~~ 607 (608)
+|.++|.+.++++.+.+.....+++.++ +||.+.... ...+.|.+||++.
T Consensus 215 -~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 215 -EDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp -TCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred -CCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 8999999999999999987445776665 699976543 3678899999865
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.56 E-value=7.8e-14 Score=134.98 Aligned_cols=182 Identities=16% Similarity=0.067 Sum_probs=117.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||+|++...|. .+.+.|.. ++.++.+|.|-.-. + ...|...
T Consensus 23 ~~~~vv~~hG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~g~------------s------------~~~~~~~-- 72 (238)
T 1ufo_A 23 PKALLLALHGLQGSKEHIL----ALLPGYAERGFLLLAFDAPRHGE------------R------------EGPPPSS-- 72 (238)
T ss_dssp CCEEEEEECCTTCCHHHHH----HTSTTTGGGTEEEEECCCTTSTT------------S------------SCCCCCT--
T ss_pred CccEEEEECCCcccchHHH----HHHHHHHhCCCEEEEecCCCCcc------------C------------CCCCCcc--
Confidence 5678999999999999998 66666653 69999999871100 0 0000000
Q ss_pred CCCccccccccCCCCCCCcccc-cccccHHHHHHHHHHHHh---H-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 450 FSGKRETNWKLADGPFDPHQYQ-QQTDGLDVSLAYLKTIFS---Q-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~-~~~~~l~~s~~~L~~~i~---~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
....+. .....+...++.+..+++ + .....+++|||+||.+|+.++... +..++
T Consensus 73 ----------------~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~~ 131 (238)
T 1ufo_A 73 ----------------KSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEG-----FRPRG 131 (238)
T ss_dssp ----------------TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTT-----CCCSC
T ss_pred ----------------cccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhc-----cCcce
Confidence 000000 000112222222222222 2 225568999999999999999843 45677
Q ss_pred EEEEecCCCCCc-------------------cccccCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHhc-cC---CcE
Q 007311 525 FAILCSGFALHS-------------------AEFEHRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAFE-EG---CSV 580 (608)
Q Consensus 525 ~vIlisG~~~~~-------------------~~~~~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~-~~---~~~ 580 (608)
+++++++..... .......+ ++|+|+++|+ +|.++|.+.++++.+.+. .. ..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (238)
T 1ufo_A 132 VLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGS---RDHIVPLARMEKTLEALRPHYPEGRLA 208 (238)
T ss_dssp EEEESCCSSCCCCCTTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEET---TCTTTTHHHHHHHHHHHGGGCTTCCEE
T ss_pred EEEEecCCccchhhhhhccCCcccchhhcCChhhhhhhccCCcEEEEECC---CCCccCcHHHHHHHHHHhhcCCCCceE
Confidence 888777644321 11223456 8999999999 899999999999999998 32 267
Q ss_pred EEEeC-CCCcCCCChhhHHHHHHHHHHhC
Q 007311 581 IIEHD-CGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 581 vv~~~-gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+++++ +||.++. +..+.+.+||.++|
T Consensus 209 ~~~~~~~~H~~~~--~~~~~~~~~l~~~l 235 (238)
T 1ufo_A 209 RFVEEGAGHTLTP--LMARVGLAFLEHWL 235 (238)
T ss_dssp EEEETTCCSSCCH--HHHHHHHHHHHHHH
T ss_pred EEEeCCCCcccHH--HHHHHHHHHHHHHH
Confidence 66666 5999865 67888999998764
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4e-14 Score=139.74 Aligned_cols=173 Identities=12% Similarity=0.115 Sum_probs=122.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++|||+||++++...|. .+.+.|.+ +++++.+|.| ... . +..+ .
T Consensus 10 ~~~~~vvllHG~~~~~~~~~----~~~~~l~~~g~~v~~~D~~--------G~G------~-------S~~~-----~-- 57 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWY----KIVALMRSSGHNVTALDLG--------ASG------I-------NPKQ-----A-- 57 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGH----HHHHHHHHTTCEEEEECCT--------TST------T-------CSCC-----G--
T ss_pred CCCCeEEEECCCCCCcchHH----HHHHHHHhcCCeEEEeccc--------cCC------C-------CCCc-----C--
Confidence 34578999999999999999 55555543 6999999987 110 0 0000 0
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.....+++.++.+.++++.. .....|+|||+||.+|+.+|.+. +..++++
T Consensus 58 -----------------------~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~l 109 (267)
T 3sty_A 58 -----------------------LQIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETF-----PEKISVA 109 (267)
T ss_dssp -----------------------GGCCSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHS-----GGGEEEE
T ss_pred -----------------------CccCCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhC-----hhhcceE
Confidence 01134666777788888775 35568999999999999999854 4568999
Q ss_pred EEecCCCCCccc-------------------------------------------------------------------c
Q 007311 527 ILCSGFALHSAE-------------------------------------------------------------------F 539 (608)
Q Consensus 527 IlisG~~~~~~~-------------------------------------------------------------------~ 539 (608)
|++++..+.... .
T Consensus 110 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (267)
T 3sty_A 110 VFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYL 189 (267)
T ss_dssp EEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCC
T ss_pred EEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHH
Confidence 998876532110 0
Q ss_pred -----------ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 540 -----------EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 540 -----------~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.+..+. ...+.|.+|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 264 (267)
T 3sty_A 190 AEDISKEVVLSSKRYGSVKRVFIVAT---ENDALKKEFLKLMIEKNPP--DEVKEIEGSDHVTMMSKPQQLFTTLLSIAN 264 (267)
T ss_dssp HHHHHHHCCCCTTTGGGSCEEEEECC---CSCHHHHHHHHHHHHHSCC--SEEEECTTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHhhcchhcccccccCCCEEEEEeC---CCCccCHHHHHHHHHhCCC--ceEEEeCCCCccccccChHHHHHHHHHHHH
Confidence 001124899999999 8999999999999999876 666666 5799865432 36777888887
Q ss_pred Hh
Q 007311 606 RF 607 (608)
Q Consensus 606 ~~ 607 (608)
++
T Consensus 265 ~~ 266 (267)
T 3sty_A 265 KY 266 (267)
T ss_dssp HC
T ss_pred hc
Confidence 63
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-14 Score=140.38 Aligned_cols=168 Identities=17% Similarity=0.202 Sum_probs=111.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.|||+||++.+...|. .+.+.|. .+++++.+|.| ... . +..
T Consensus 20 ~~vvllHG~~~~~~~w~----~~~~~l~~~g~~vi~~D~~--------G~G------~-------S~~------------ 62 (271)
T 3ia2_A 20 KPVLFSHGWLLDADMWE----YQMEYLSSRGYRTIAFDRR--------GFG------R-------SDQ------------ 62 (271)
T ss_dssp SEEEEECCTTCCGGGGH----HHHHHHHTTTCEEEEECCT--------TST------T-------SCC------------
T ss_pred CeEEEECCCCCcHHHHH----HHHHHHHhCCceEEEecCC--------CCc------c-------CCC------------
Confidence 46999999999999999 4445553 47999999988 110 0 000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.. ....++...+.+.++++..+ ....|+||||||++++.++.+. .+..++++|+++
T Consensus 63 ------------~~-------~~~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~----~p~~v~~lvl~~ 119 (271)
T 3ia2_A 63 ------------PW-------TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARH----GSARVAGLVLLG 119 (271)
T ss_dssp ------------CS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHH----CSTTEEEEEEES
T ss_pred ------------CC-------CCCCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHh----CCcccceEEEEc
Confidence 00 01234555666667776654 4458999999999887777643 256799999998
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+..|....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (271)
T 3ia2_A 120 AVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFA 199 (271)
T ss_dssp CCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cCCccccCCCCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhh
Confidence 75432100
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHH-HHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASK-ELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~-~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+|||+ +|.++|.+.+. .+.+.+++ .++++. ++||.++.+. ...+.|.+||+
T Consensus 200 ~~~~~~~l~~i~~P~Lvi~G~---~D~~~p~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 200 ETDFRPDMAKIDVPTLVIHGD---GDQIVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp HCBCHHHHTTCCSCEEEEEET---TCSSSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred ccCCcccccCCCCCEEEEEeC---CCCcCChHHHHHHHHHhCCC--ceEEEEcCCCCcccccCHHHHHHHHHHHhh
Confidence 0124689999999999 89999998754 45556555 555555 5699875532 25667777764
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.8e-14 Score=138.28 Aligned_cols=168 Identities=18% Similarity=0.157 Sum_probs=120.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccC--CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKN--IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~--~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++||++||+|++...|. .+...|.. +++++.+|.|- .. .....
T Consensus 21 ~~~vv~lhG~~~~~~~~~----~~~~~l~~~~g~~v~~~d~~G--------~G-------------------~s~~~--- 66 (272)
T 3fsg_A 21 GTPIIFLHGLSLDKQSTC----LFFEPLSNVGQYQRIYLDLPG--------MG-------------------NSDPI--- 66 (272)
T ss_dssp SSEEEEECCTTCCHHHHH----HHHTTSTTSTTSEEEEECCTT--------ST-------------------TCCCC---
T ss_pred CCeEEEEeCCCCcHHHHH----HHHHHHhccCceEEEEecCCC--------CC-------------------CCCCC---
Confidence 457999999999999999 66666765 89999999871 00 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH-hC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ-EG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~-~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. . ..+++.++.+.++++. .+ ....|+|||+||.+|+.+|.+. +..++++|
T Consensus 67 ---------------~-------~-~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lv 118 (272)
T 3fsg_A 67 ---------------S-------P-STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHL-----KDQTLGVF 118 (272)
T ss_dssp ---------------S-------S-CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHS-----GGGEEEEE
T ss_pred ---------------C-------C-CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhC-----hHhhheeE
Confidence 0 0 2355566666666666 33 4558999999999999999854 45699999
Q ss_pred EecCCCCCccc---------------------------------------------------------------------
Q 007311 528 LCSGFALHSAE--------------------------------------------------------------------- 538 (608)
Q Consensus 528 lisG~~~~~~~--------------------------------------------------------------------- 538 (608)
++++.......
T Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (272)
T 3fsg_A 119 LTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTF 198 (272)
T ss_dssp EEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTT
T ss_pred EECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCCh
Confidence 99877421100
Q ss_pred ---cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .+++..+ +||.+..+. ...+.|.+||++
T Consensus 199 ~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 267 (272)
T 3fsg_A 199 EEKLKNINYQFPFKIMVGR---NDQVVGYQEQLKLINHNEN--GEIVLLNRTGHNLMIDQREAVGFHFDLFLDE 267 (272)
T ss_dssp HHHHTTCCCSSCEEEEEET---TCTTTCSHHHHHHHTTCTT--EEEEEESSCCSSHHHHTHHHHHHHHHHHHHH
T ss_pred hhhhhhccCCCCEEEEEeC---CCCcCCHHHHHHHHHhcCC--CeEEEecCCCCCchhcCHHHHHHHHHHHHHH
Confidence 0236789999999999 8999999999999988875 5666665 599975432 356778888865
|
| >1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-15 Score=142.46 Aligned_cols=101 Identities=11% Similarity=0.193 Sum_probs=78.5
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhh-hhcCCC
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNA-EQLQGK 207 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~-~~~k~k 207 (608)
...|+++|+.+++++ ++++|||||++.||+.|||+| +++.+...+. .++.+.. ...+++
T Consensus 27 ~~~Is~~el~~~l~~-------------~~~~lIDvR~~~ey~~ghIpg----Ainip~~~l~---~~~~~l~~~~~~~~ 86 (152)
T 1t3k_A 27 ISYITSTQLLPLHRR-------------PNIAIIDVRDEERNYDGHIAG----SLHYASGSFD---DKISHLVQNVKDKD 86 (152)
T ss_dssp SEEECTTTTTTCCCC-------------TTEEEEEESCSHHHHSSCCCS----SEEECCSSSS---TTHHHHHHTCCSCC
T ss_pred CceECHHHHHHHhcC-------------CCEEEEECCChhhccCccCCC----CEECCHHHHH---HHHHHHHHhcCCCC
Confidence 467888888877643 578999999999999999999 5665543333 3333322 125789
Q ss_pred eEEEEcC-CCccHHHHHHHHHh------cCCCCCcEEEcCccHHHHHHh
Q 007311 208 HVLMYCT-GGIRCEMASAYVRS------KGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 208 ~Iv~yCt-gGiR~~~a~~~L~~------~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+||+||. +|.|+..|+..|++ +..||+|||.|+|||.+|.++
T Consensus 87 ~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~ 135 (152)
T 1t3k_A 87 TLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEAS 135 (152)
T ss_dssp EEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHH
T ss_pred EEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHc
Confidence 9999999 99999999998854 124999999999999999875
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-13 Score=141.69 Aligned_cols=180 Identities=18% Similarity=0.181 Sum_probs=120.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++||++||++.+...|. .+.+.|.. ++.++.+|.|- .. . +..+.
T Consensus 58 ~~~p~vv~~HG~~~~~~~~~----~~~~~l~~~g~~vi~~D~~G--------~G------~-------S~~~~------- 105 (342)
T 3hju_A 58 TPKALIFVSHGAGEHSGRYE----ELARMLMGLDLLVFAHDHVG--------HG------Q-------SEGER------- 105 (342)
T ss_dssp CCSEEEEEECCTTCCGGGGH----HHHHHHHTTTEEEEEECCTT--------ST------T-------SCSST-------
T ss_pred CCCcEEEEECCCCcccchHH----HHHHHHHhCCCeEEEEcCCC--------Cc------C-------CCCcC-------
Confidence 44678999999999999998 66666654 79999999871 00 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.....+....+++.+.+++|.... .....+|+|||+||.+|+.+|.+. +..++++|+
T Consensus 106 ----------------~~~~~~~~~~~d~~~~l~~l~~~~--~~~~v~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl 162 (342)
T 3hju_A 106 ----------------MVVSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAER-----PGHFAGMVL 162 (342)
T ss_dssp ----------------TCCSCTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHS-----TTTCSEEEE
T ss_pred ----------------CCcCcHHHHHHHHHHHHHHHHHhC--CCCcEEEEEeChHHHHHHHHHHhC-----ccccceEEE
Confidence 000011111223333333333221 122458999999999999999854 457999999
Q ss_pred ecCCCCCccc-------------------------------------------------------------------ccc
Q 007311 529 CSGFALHSAE-------------------------------------------------------------------FEH 541 (608)
Q Consensus 529 isG~~~~~~~-------------------------------------------------------------------~~~ 541 (608)
++++...... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 3hju_A 163 ISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERAL 242 (342)
T ss_dssp ESCCCSCCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHG
T ss_pred ECcccccchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHH
Confidence 9987543210 113
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCChh-----hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTRSP-----YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~-----~~~~i~~Fl~~~ 607 (608)
..+++|+|+++|+ +|.+++.+.++++.+.+.....++++.++ ||.+....+ .+..+.+||.+.
T Consensus 243 ~~i~~Pvlii~G~---~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 243 PKLTVPFLLLQGS---ADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp GGCCSCEEEEEET---TCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCcCEEEEEeC---CCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 5679999999999 89999999999999999853366666664 999776532 456677777653
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=134.04 Aligned_cols=105 Identities=20% Similarity=0.248 Sum_probs=83.1
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHH
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~ 573 (608)
..+|+|||+||.+|+.++... + ++++|++++............+++|+|+++|+ +|.++|.+.++++.+.
T Consensus 116 ~i~l~G~S~Gg~~a~~~a~~~-----~--~~~~v~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~ 185 (236)
T 1zi8_A 116 KVGLVGYSLGGALAFLVASKG-----Y--VDRAVGYYGVGLEKQLNKVPEVKHPALFHMGG---QDHFVPAPSRQLITEG 185 (236)
T ss_dssp EEEEEEETHHHHHHHHHHHHT-----C--SSEEEEESCSSGGGCGGGGGGCCSCEEEEEET---TCTTSCHHHHHHHHHH
T ss_pred CEEEEEECcCHHHHHHHhccC-----C--ccEEEEecCcccccchhhhhhcCCCEEEEecC---CCCCCCHHHHHHHHHH
Confidence 457999999999999999843 2 89999998876554444566789999999999 8999999999999998
Q ss_pred hcc-CCcEEEEeC-CCCcCCCCh----------hhHHHHHHHHHHhC
Q 007311 574 FEE-GCSVIIEHD-CGHIIPTRS----------PYIDEIKSFLQRFL 608 (608)
Q Consensus 574 ~~~-~~~~vv~~~-gGH~ip~~~----------~~~~~i~~Fl~~~L 608 (608)
+.. ...+++.++ +||.+.... ...+.+.+||.+.|
T Consensus 186 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l 232 (236)
T 1zi8_A 186 FGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQ 232 (236)
T ss_dssp HTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred HHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhc
Confidence 853 246777666 699876542 36788999998764
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.7e-14 Score=135.27 Aligned_cols=178 Identities=12% Similarity=0.072 Sum_probs=119.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||++||++++...|. .+.+.|. .++.++.+|.|- .. . +. ......
T Consensus 21 ~~~~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g--------~g------~-------s~--~~~~~~--- 70 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMN----FMARALQRSGYGVYVPLFSG--------HG------T-------VE--PLDILT--- 70 (251)
T ss_dssp SSEEEEEECCTTCCGGGGH----HHHHHHHHTTCEEEECCCTT--------CS------S-------SC--THHHHH---
T ss_pred CCceEEEeCCCCCCHHHHH----HHHHHHHHCCCEEEecCCCC--------CC------C-------CC--hhhhcC---
Confidence 4568999999999999998 5555555 469999999871 00 0 00 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. ...+.+.+.+..+.+.+.......+|+|||+||.+|+.+|.+. +..++++|++
T Consensus 71 ------------------~---~~~~~~~~d~~~~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~ 124 (251)
T 3dkr_A 71 ------------------K---GNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETL-----PGITAGGVFS 124 (251)
T ss_dssp ------------------H---CCHHHHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHC-----SSCCEEEESS
T ss_pred ------------------c---ccHHHHHHHHHHHHHHHHHhcCCeEEEEechHHHHHHHHHHhC-----ccceeeEEEe
Confidence 0 0011111222222222222244568999999999999999853 4578888888
Q ss_pred cCCCCCcc--------------------------------------------ccccCCCCCCEEEEEcCCCCCCcccchH
Q 007311 530 SGFALHSA--------------------------------------------EFEHRSINCPSLHIFGGDLGNDRQVANQ 565 (608)
Q Consensus 530 sG~~~~~~--------------------------------------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~ 565 (608)
++...... ......+++|+|+++|+ +|.++|.+
T Consensus 125 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~ 201 (251)
T 3dkr_A 125 SPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAG---QDELVDGR 201 (251)
T ss_dssp CCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEET---TCSSBCTT
T ss_pred cchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHHHHHHHHHHhccccccCCCEEEEecC---CCcccChH
Confidence 87765210 01246788999999999 89999999
Q ss_pred HHHHHHHHhcc-CCcEEEEeC-CCCcCCCCh---hhHHHHHHHHHHh
Q 007311 566 ASKELAKAFEE-GCSVIIEHD-CGHIIPTRS---PYIDEIKSFLQRF 607 (608)
Q Consensus 566 ~~~~l~~~~~~-~~~~vv~~~-gGH~ip~~~---~~~~~i~~Fl~~~ 607 (608)
.++++.+.+.. ...+++.++ +||.+.... +..+.|.+||++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 202 LAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhh
Confidence 99999999987 445776665 599876542 3678899999764
|
| >2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-15 Score=133.14 Aligned_cols=82 Identities=21% Similarity=0.290 Sum_probs=69.3
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||||++.||+.|||+| +++.+ +.++...+.+ ....++++||+||.+|.||.+|+.+|++. ||++
T Consensus 15 ~~~~liDvR~~~e~~~ghIpg----Ai~ip---~~~l~~~~~~-~~~~~~~~ivvyC~~G~rs~~aa~~L~~~--G~~~- 83 (110)
T 2k0z_A 15 NDFIVVDVRELDEYEELHLPN----ATLIS---VNDQEKLADF-LSQHKDKKVLLHCRAGRRALDAAKSMHEL--GYTP- 83 (110)
T ss_dssp GGSEEEEEECHHHHHHSBCTT----EEEEE---TTCHHHHHHH-HHSCSSSCEEEECSSSHHHHHHHHHHHHT--TCCC-
T ss_pred CCeEEEECCCHHHHhcCcCCC----CEEcC---HHHHHHHHHh-cccCCCCEEEEEeCCCchHHHHHHHHHHC--CCCE-
Confidence 478999999999999999999 66665 3455554433 23568999999999999999999999997 9999
Q ss_pred EEcCccHHHHHHh
Q 007311 237 FQLYGGIQRYLEQ 249 (608)
Q Consensus 237 ~~L~GGi~~w~~~ 249 (608)
|+|.||+.+|.++
T Consensus 84 ~~l~GG~~~W~~~ 96 (110)
T 2k0z_A 84 YYLEGNVYDFEKY 96 (110)
T ss_dssp EEEESCGGGTTTT
T ss_pred EEecCCHHHHHHC
Confidence 9999999999764
|
| >2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3.4e-15 Score=138.79 Aligned_cols=105 Identities=17% Similarity=0.352 Sum_probs=78.0
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHH-------h--
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWID-------N-- 199 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~-------~-- 199 (608)
++.|+++|+.+++++. +++++|||||++.||+.|||+| +++.+...+ +..++. .
T Consensus 3 ~~~Is~~~l~~~l~~~-----------~~~~~iiDvR~~~ey~~gHIpg----Ainip~~~l--~~~~~~~~~~~~~~ll 65 (153)
T 2vsw_A 3 GTQIVTERLVALLESG-----------TEKVLLIDSRPFVEYNTSHILE----AININCSKL--MKRRLQQDKVLITELI 65 (153)
T ss_dssp CEEECHHHHHHHHTST-----------TCCEEEEECSCHHHHHHCEETT----CEECCCCHH--HHHHHHTTSSCHHHHH
T ss_pred CccccHHHHHHHHhcC-----------CCCEEEEECCCHHHhccCccCC----CeeeChHHH--HHhhhhcCCcCHHHhc
Confidence 5789999999999641 2579999999999999999999 444432211 011111 1
Q ss_pred ------hhhhcCCCeEEEEcCCCccHHHH------HHHHH--hcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 200 ------NAEQLQGKHVLMYCTGGIRCEMA------SAYVR--SKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 200 ------~~~~~k~k~Iv~yCtgGiR~~~a------~~~L~--~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
.....++++||+||.+|.|+..+ +.+|+ ++ ||++||.|+||+.+|.+++++
T Consensus 66 ~~~~~~~~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~--G~~~v~~L~GG~~~W~~~~~~ 130 (153)
T 2vsw_A 66 QHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEK--SFNSVHLLAGGFAEFSRCFPG 130 (153)
T ss_dssp HHSCSSCCCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHH--HCSCEEEETTHHHHHHHHCGG
T ss_pred CchhhhhhccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHh--CCCcEEEEeChHHHHHHhChh
Confidence 01236789999999999999877 36666 44 899999999999999987653
|
| >2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.55 E-value=8.5e-15 Score=136.30 Aligned_cols=114 Identities=14% Similarity=0.244 Sum_probs=79.5
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC--chHHHHhhhhhcCC
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD--LPTWIDNNAEQLQG 206 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~--~~~~~~~~~~~~k~ 206 (608)
...|+++++.+++++. ...++++|||||++ ||+.|||+| +++.+...+.+ ++. +...+. .++
T Consensus 4 ~~~Is~~el~~~l~~~---------~~~~~~~lIDvR~~-ey~~gHIpG----Ainip~~~l~~~~~~~-l~~~l~-~~~ 67 (152)
T 2j6p_A 4 YTYIKPEELVELLDNP---------DSLVKAAVIDCRDS-DRDCGFIVN----SINMPTISCTEEMYEK-LAKTLF-EEK 67 (152)
T ss_dssp CEEECHHHHHHHHHSH---------HHHHTEEEEECCST-TGGGCBCTT----CEECCTTTCCHHHHHH-HHHHHH-HTT
T ss_pred cCccCHHHHHHHHhCC---------CCCCCEEEEEcCcH-HhCcCcCCC----cEECChhHhhHHHHHH-HHHHhc-ccC
Confidence 3578999999999751 00026899999999 999999999 55555333321 222 111111 134
Q ss_pred C-eEEEEc-CCCccHHHHH----HHHHhcCCCC--CcEEEcCccHHHHHHhCCCCCeeceeeee
Q 007311 207 K-HVLMYC-TGGIRCEMAS----AYVRSKGAGF--ENVFQLYGGIQRYLEQFPDGGFFKGKNFV 262 (608)
Q Consensus 207 k-~Iv~yC-tgGiR~~~a~----~~L~~~~~Gf--~nV~~L~GGi~~w~~~~~~~~~~~G~~fV 262 (608)
+ .||+|| .+|.|+..|+ .+|++. || ++||+|+||+.+|.++.++ +.....||
T Consensus 68 ~~~vV~yC~~sg~rs~~aa~~~~~~L~~~--G~~~~~v~~L~GG~~~W~~~g~~--~~~~~~yv 127 (152)
T 2j6p_A 68 KELAVFHCAQSLVRAPKGANRFALAQKKL--GYVLPAVYVLRGGWEAFYHMYGD--VRPDLMYV 127 (152)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHH--TCCCSEEEEETTHHHHHHHHHTT--TCGGGCEE
T ss_pred CCEEEEEcCCCCCccHHHHHHHHHHHHHc--CCCCCCEEEEcCcHHHHHHHcCC--CCCCCeeE
Confidence 4 577789 7999999998 778877 87 5999999999999987543 34455554
|
| >1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=6.7e-15 Score=138.09 Aligned_cols=119 Identities=18% Similarity=0.310 Sum_probs=85.4
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHH-Hhhhh-hcC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWI-DNNAE-QLQ 205 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~-~~~~~-~~k 205 (608)
..+.|+++++.+++++. .....++++|||||++.||+.|||+| +++.+.. ++.... ..... ..+
T Consensus 21 ~~~~is~~el~~~l~~~-------~~~~~~~~~liDvR~~~e~~~ghIpg----Ainip~~---~~~~~~~~~~~~~~~~ 86 (161)
T 1c25_A 21 DLKYISPEIMASVLNGK-------FANLIKEFVIIDCRYPYEYEGGHIKG----AVNLHME---EEVEDFLLKKPIVPTD 86 (161)
T ss_dssp TSCEECHHHHHHHHTTT-------TTTTEEEEEEEECSCHHHHHTCEETT----CEECCSH---HHHHHHTTTSCCCCCT
T ss_pred CcceeCHHHHHHHHhcc-------ccccCCCeEEEECCChHHccCCcccC----cEeCChh---HHHHHHHhhhhhccCC
Confidence 35789999999999752 00011368999999999999999999 5555421 222111 11001 247
Q ss_pred CCeE--EEEcC-CCccHHHHHHHHHhc--------CCCCCcEEEcCccHHHHHHhCCCCCeeceeeee
Q 007311 206 GKHV--LMYCT-GGIRCEMASAYVRSK--------GAGFENVFQLYGGIQRYLEQFPDGGFFKGKNFV 262 (608)
Q Consensus 206 ~k~I--v~yCt-gGiR~~~a~~~L~~~--------~~Gf~nV~~L~GGi~~w~~~~~~~~~~~G~~fV 262 (608)
+++| |+||. +|.|+..|+.+|+++ ..||+|||.|+||+.+|.++.+ .+..+.+||
T Consensus 87 ~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~--~~~~~~~y~ 152 (161)
T 1c25_A 87 GKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQ--SYCEPPSYR 152 (161)
T ss_dssp TSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHG--GGEESSCCC
T ss_pred CCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcc--cccCCCCce
Confidence 8886 67899 999999999999863 1499999999999999998854 356666665
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.7e-13 Score=129.02 Aligned_cols=117 Identities=19% Similarity=0.177 Sum_probs=85.2
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcC
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~ 554 (608)
+++.+.+++|.+.+. ....+|+||||||.+|+.++ .. ..++++|++++............+++|+|+++|+
T Consensus 89 ~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a-~~------~~v~~~v~~~~~~~~~~~~~~~~~~~p~l~i~g~ 159 (208)
T 3trd_A 89 EDLKAVLRWVEHHWS--QDDIWLAGFSFGAYISAKVA-YD------QKVAQLISVAPPVFYEGFASLTQMASPWLIVQGD 159 (208)
T ss_dssp HHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHH-HH------SCCSEEEEESCCTTSGGGTTCCSCCSCEEEEEET
T ss_pred HHHHHHHHHHHHhCC--CCeEEEEEeCHHHHHHHHHh-cc------CCccEEEEeccccccCCchhhhhcCCCEEEEECC
Confidence 445555555544421 24568999999999999999 33 2799999999987554434455678999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHHHHHHHh
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
+|.++|.+.++++.+.+... .++++++ +||.+.... +++.+++.+|
T Consensus 160 ---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~---~~~~~~i~~f 206 (208)
T 3trd_A 160 ---QDEVVPFEQVKAFVNQISSP-VEFVVMSGASHFFHGRL---IELRELLVRN 206 (208)
T ss_dssp ---TCSSSCHHHHHHHHHHSSSC-CEEEEETTCCSSCTTCH---HHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHccCc-eEEEEeCCCCCcccccH---HHHHHHHHHH
Confidence 89999999999999998875 5666665 699987643 4444444443
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.4e-14 Score=140.12 Aligned_cols=171 Identities=14% Similarity=0.121 Sum_probs=123.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++||++||++.+...|. .+.+.|.++++++.+|.|- .. ...+..
T Consensus 23 ~~~vv~~HG~~~~~~~~~----~~~~~L~~~~~vi~~d~~G--------~G------------------~s~~~~----- 67 (278)
T 3oos_A 23 GPPLCVTHLYSEYNDNGN----TFANPFTDHYSVYLVNLKG--------CG------------------NSDSAK----- 67 (278)
T ss_dssp SSEEEECCSSEECCTTCC----TTTGGGGGTSEEEEECCTT--------ST------------------TSCCCS-----
T ss_pred CCeEEEEcCCCcchHHHH----HHHHHhhcCceEEEEcCCC--------CC------------------CCCCCC-----
Confidence 457999999999999998 6667777789999999881 10 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ .....+++..+.+.++++..+ ....|+|||+||.+|+.+|.+.+ ..++++|+++
T Consensus 68 --------------~-----~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~ 123 (278)
T 3oos_A 68 --------------N-----DSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQ-----ESLTKIIVGG 123 (278)
T ss_dssp --------------S-----GGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHG-----GGEEEEEEES
T ss_pred --------------C-----cccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCc-----hhhCeEEEec
Confidence 0 011245566666777777654 45589999999999999998653 4699999999
Q ss_pred CCCCCcc-------------------------------------------------------------------------
Q 007311 531 GFALHSA------------------------------------------------------------------------- 537 (608)
Q Consensus 531 G~~~~~~------------------------------------------------------------------------- 537 (608)
+......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (278)
T 3oos_A 124 AAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYF 203 (278)
T ss_dssp CCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHH
T ss_pred CccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHh
Confidence 8876000
Q ss_pred ----------ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHHHHHHH
Q 007311 538 ----------EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 538 ----------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
......+++|+|+++|+ +|.++|.+.++++++.+++ .+++..+ +||.+.. +..+++.+.|.+
T Consensus 204 ~~~~~~~~~~~~~~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~--~~p~~~~~~i~~ 276 (278)
T 3oos_A 204 RQVEYKDYDVRQKLKFVKIPSFIYCGK---HDVQCPYIFSCEIANLIPN--ATLTKFEESNHNPFV--EEIDKFNQFVND 276 (278)
T ss_dssp HHTTGGGCBCHHHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHSTT--EEEEEETTCSSCHHH--HSHHHHHHHHHH
T ss_pred hhcccccccHHHHHhCCCCCEEEEEec---cCCCCCHHHHHHHHhhCCC--cEEEEcCCcCCCccc--ccHHHHHHHHHh
Confidence 01124689999999999 8999999999999999876 6666665 5999765 455677777776
Q ss_pred hC
Q 007311 607 FL 608 (608)
Q Consensus 607 ~L 608 (608)
||
T Consensus 277 fl 278 (278)
T 3oos_A 277 TL 278 (278)
T ss_dssp TC
T ss_pred hC
Confidence 65
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-13 Score=135.51 Aligned_cols=169 Identities=18% Similarity=0.188 Sum_probs=114.3
Q ss_pred cEEEEecCCCCC-hHHHHHHHHHHHHHccCC-cEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 373 LRILCLHGFRQN-ASSFKGRTASLAKKLKNI-AEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 373 ~~iLlLHG~G~n-a~~f~~~~~~L~~~L~~~-~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+.||++||++++ ...|. .+.+.|... ++++.+|.| .+. . + ..+..
T Consensus 24 ~~vvllHG~~~~~~~~~~----~~~~~l~~~g~~vi~~D~~--------G~G------~-----S--~~~~~-------- 70 (254)
T 2ocg_A 24 HAVLLLPGMLGSGETDFG----PQLKNLNKKLFTVVAWDPR--------GYG------H-----S--RPPDR-------- 70 (254)
T ss_dssp EEEEEECCTTCCHHHHCH----HHHHHSCTTTEEEEEECCT--------TST------T-----C--CSSCC--------
T ss_pred CeEEEECCCCCCCccchH----HHHHHHhhCCCeEEEECCC--------CCC------C-----C--CCCCC--------
Confidence 479999999999 67788 677777754 999999988 110 0 0 00000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.++ ...+.+.++.+.++++..+ ....|+||||||.+|+.+|.++ +..++++|++
T Consensus 71 -------------~~~-------~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~-----p~~v~~lvl~ 125 (254)
T 2ocg_A 71 -------------DFP-------ADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKY-----PSYIHKMVIW 125 (254)
T ss_dssp -------------CCC-------TTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEE
T ss_pred -------------CCC-------hHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHC-----hHHhhheeEe
Confidence 000 0113444555556666554 4558999999999999999854 5679999998
Q ss_pred cCCCCCcc-------------------------------------------------------ccccCCCCCCEEEEEcC
Q 007311 530 SGFALHSA-------------------------------------------------------EFEHRSINCPSLHIFGG 554 (608)
Q Consensus 530 sG~~~~~~-------------------------------------------------------~~~~~~i~~PvL~i~G~ 554 (608)
++...... .....++++|+|+++|+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 205 (254)
T 2ocg_A 126 GANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGE 205 (254)
T ss_dssp SCCSBCCHHHHHHHHTTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEET
T ss_pred ccccccChhhHHHHHHHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecC
Confidence 76431100 01134689999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHH
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFL 604 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl 604 (608)
+|.++|.+.++.+++.+++ .+++.. ++||.++.+. .+.+.|.+||
T Consensus 206 ---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 206 ---KDPLVPRFHADFIHKHVKG--SRLHLMPEGKHNLHLRFADEFNKLAEDFL 253 (254)
T ss_dssp ---TCSSSCHHHHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred ---CCccCCHHHHHHHHHhCCC--CEEEEcCCCCCchhhhCHHHHHHHHHHHh
Confidence 8999999999999998876 455444 5799976432 2455666665
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.2e-14 Score=134.03 Aligned_cols=159 Identities=17% Similarity=0.202 Sum_probs=110.4
Q ss_pred ccEEEEecCCCCCh---HHHHHHHHHHHHHccC--CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 372 KLRILCLHGFRQNA---SSFKGRTASLAKKLKN--IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 372 ~~~iLlLHG~G~na---~~f~~~~~~L~~~L~~--~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
+++||++||++++. ..|.. .+.+.|.. +++++.+|.|- +..
T Consensus 4 ~p~vv~lHG~~~~~~~~~~~~~---~~~~~l~~~~g~~vi~~d~~g-------------------------------~~~ 49 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDVTTHGWYG---WVKKELEKIPGFQCLAKNMPD-------------------------------PIT 49 (194)
T ss_dssp CCEEEEECCSSSSCTTTSTTHH---HHHHHHTTSTTCCEEECCCSS-------------------------------TTT
T ss_pred CCEEEEECCCCCCCcccchHHH---HHHHHHhhccCceEEEeeCCC-------------------------------CCc
Confidence 46899999999994 66762 25666765 79999998771 000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
..+...++.+.+.+.. .....|+||||||.+|+.++.+. + ++++
T Consensus 50 ----------------------------~~~~~~~~~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~-----p--v~~l 93 (194)
T 2qs9_A 50 ----------------------------ARESIWLPFMETELHC-DEKTIIIGHSSGAIAAMRYAETH-----R--VYAI 93 (194)
T ss_dssp ----------------------------CCHHHHHHHHHHTSCC-CTTEEEEEETHHHHHHHHHHHHS-----C--CSEE
T ss_pred ----------------------------ccHHHHHHHHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhC-----C--CCEE
Confidence 0122223333322221 13458999999999999999842 3 9999
Q ss_pred EEecCCCCCccc---------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcC
Q 007311 527 ILCSGFALHSAE---------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHII 590 (608)
Q Consensus 527 IlisG~~~~~~~---------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~i 590 (608)
|+++++.+.... .....+..|+|+++|+ +|.++|.+.++++++.+ + .++++.+ +||.+
T Consensus 94 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~G~---~D~~vp~~~~~~~~~~~-~--~~~~~~~~~gH~~ 167 (194)
T 2qs9_A 94 VLVSAYTSDLGDENERASGYFTRPWQWEKIKANCPYIVQFGST---DDPFLPWKEQQEVADRL-E--TKLHKFTDCGHFQ 167 (194)
T ss_dssp EEESCCSSCTTCHHHHHTSTTSSCCCHHHHHHHCSEEEEEEET---TCSSSCHHHHHHHHHHH-T--CEEEEESSCTTSC
T ss_pred EEEcCCccccchhhhHHHhhhcccccHHHHHhhCCCEEEEEeC---CCCcCCHHHHHHHHHhc-C--CeEEEeCCCCCcc
Confidence 999987653211 1122346799999999 89999999999999988 4 4555554 59997
Q ss_pred CCC-hhhHHHHHHHHHH
Q 007311 591 PTR-SPYIDEIKSFLQR 606 (608)
Q Consensus 591 p~~-~~~~~~i~~Fl~~ 606 (608)
+.+ ++.+.++.+||++
T Consensus 168 ~~~~p~~~~~~~~fl~~ 184 (194)
T 2qs9_A 168 NTEFHELITVVKSLLKV 184 (194)
T ss_dssp SSCCHHHHHHHHHHHTC
T ss_pred chhCHHHHHHHHHHHHh
Confidence 665 4577888899875
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.54 E-value=4.6e-14 Score=140.92 Aligned_cols=170 Identities=18% Similarity=0.187 Sum_probs=122.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..++.||++||+|++...|. .+.+.|. .++.++.+|.+-. ....
T Consensus 52 ~~~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~-----------------------------g~~~-- 96 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQSSIA----WLGPRLASQGFVVFTIDTNTT-----------------------------LDQP-- 96 (262)
T ss_dssp CCEEEEEEECCTTCCGGGTT----THHHHHHTTTCEEEEECCSST-----------------------------TCCH--
T ss_pred CCCCEEEEeCCcCCCchhHH----HHHHHHHhCCCEEEEeCCCCC-----------------------------CCCC--
Confidence 45688999999999999988 5666664 4799999987610 0000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHH---HhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTI---FSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~---i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
.....++..++++|.+. +... ....+|+||||||.+|+.++.+. ..++
T Consensus 97 ----------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~ 148 (262)
T 1jfr_A 97 ----------------------DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSR------TSLK 148 (262)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHC------TTCS
T ss_pred ----------------------chhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcC------ccce
Confidence 00123456666666652 2221 23457999999999999999853 2389
Q ss_pred EEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhcc-CCcEEEEeCC-CCcCCCC--hhhHHH
Q 007311 525 FAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEE-GCSVIIEHDC-GHIIPTR--SPYIDE 599 (608)
Q Consensus 525 ~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~-~~~~vv~~~g-GH~ip~~--~~~~~~ 599 (608)
++|+++++.... ....+++|+|+++|+ +|.+++.+. ++++.+.+.. ...+++.+++ ||.+... ....+.
T Consensus 149 ~~v~~~p~~~~~---~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 222 (262)
T 1jfr_A 149 AAIPLTGWNTDK---TWPELRTPTLVVGAD---GDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKY 222 (262)
T ss_dssp EEEEESCCCSCC---CCTTCCSCEEEEEET---TCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHH
T ss_pred EEEeecccCccc---cccccCCCEEEEecC---ccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHH
Confidence 999999876532 355779999999999 899999998 9999999875 2346666654 9987553 347899
Q ss_pred HHHHHHHhC
Q 007311 600 IKSFLQRFL 608 (608)
Q Consensus 600 i~~Fl~~~L 608 (608)
+.+||.++|
T Consensus 223 i~~fl~~~l 231 (262)
T 1jfr_A 223 SISWLKRFI 231 (262)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998753
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.8e-14 Score=137.25 Aligned_cols=169 Identities=15% Similarity=0.142 Sum_probs=119.4
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||++++...|. .+.+.|.+ +++++.+|.|- .. ...+..
T Consensus 25 ~~~~vv~~hG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~G--------~G------------------~s~~~~--- 71 (286)
T 3qit_A 25 EHPVVLCIHGILEQGLAWQ----EVALPLAAQGYRVVAPDLFG--------HG------------------RSSHLE--- 71 (286)
T ss_dssp TSCEEEEECCTTCCGGGGH----HHHHHHHHTTCEEEEECCTT--------ST------------------TSCCCS---
T ss_pred CCCEEEEECCCCcccchHH----HHHHHhhhcCeEEEEECCCC--------CC------------------CCCCCC---
Confidence 3568999999999999999 55555543 59999999881 00 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ .....+.+..+.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|+
T Consensus 72 ----------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl 125 (286)
T 3qit_A 72 ----------------M-----VTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVR-----PKKIKELIL 125 (286)
T ss_dssp ----------------S-----GGGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred ----------------C-----CCCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhC-----hhhccEEEE
Confidence 0 012235566666777777654 4568999999999999999854 456999999
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++..+....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (286)
T 3qit_A 126 VELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAII 205 (286)
T ss_dssp ESCCCCCCC---CCHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGG
T ss_pred ecCCCCCccccchhhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhh
Confidence 9986542110
Q ss_pred -------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHH
Q 007311 539 -------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDE 599 (608)
Q Consensus 539 -------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~ 599 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .++++.++||.+.. +..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~ggH~~~~--e~p~~ 278 (286)
T 3qit_A 206 RTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGD---SSKLNRPEDLQQQKMTMTQ--AKRVFLSGGHNLHI--DAAAA 278 (286)
T ss_dssp GGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEET---TCCSSCHHHHHHHHHHSTT--SEEEEESSSSCHHH--HTHHH
T ss_pred hccccccccccccchhHHHHHHhccCCCeEEEEeC---CCcccCHHHHHHHHHHCCC--CeEEEeeCCchHhh--hChHH
Confidence 0014679999999999 8999999999999999876 56666666999765 45566
Q ss_pred HHHHHH
Q 007311 600 IKSFLQ 605 (608)
Q Consensus 600 i~~Fl~ 605 (608)
+.+.|.
T Consensus 279 ~~~~i~ 284 (286)
T 3qit_A 279 LASLIL 284 (286)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 666654
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.54 E-value=4.9e-14 Score=140.14 Aligned_cols=168 Identities=17% Similarity=0.198 Sum_probs=118.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++||||||+++++..|. .+.+.|.+.++++.+|.| .+. . + ..
T Consensus 16 ~~~vvllHG~~~~~~~w~----~~~~~L~~~~~via~Dl~--------G~G------~-------S-----~~------- 58 (255)
T 3bf7_A 16 NSPIVLVHGLFGSLDNLG----VLARDLVNDHNIIQVDVR--------NHG------L-------S-----PR------- 58 (255)
T ss_dssp CCCEEEECCTTCCTTTTH----HHHHHHTTTSCEEEECCT--------TST------T-------S-----CC-------
T ss_pred CCCEEEEcCCcccHhHHH----HHHHHHHhhCcEEEecCC--------CCC------C-------C-----CC-------
Confidence 457999999999999999 677777767999999988 110 0 0 00
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ ...+++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+++
T Consensus 59 ---------------~-----~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~ 113 (255)
T 3bf7_A 59 ---------------E-----PVMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALA-----PDRIDKLVAID 113 (255)
T ss_dssp ---------------C-----SCCCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred ---------------C-----CCcCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhC-----cHhhccEEEEc
Confidence 0 01134455666777777654 4558999999999999999854 45688898875
Q ss_pred CCCC--C-c------------------c-------------c---------------------------------cccCC
Q 007311 531 GFAL--H-S------------------A-------------E---------------------------------FEHRS 543 (608)
Q Consensus 531 G~~~--~-~------------------~-------------~---------------------------------~~~~~ 543 (608)
+.+. . . . . .....
T Consensus 114 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (255)
T 3bf7_A 114 IAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPA 193 (255)
T ss_dssp CCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCC
T ss_pred CCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccc
Confidence 3211 0 0 0 0 00136
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
+++|+|+|+|+ +|..++.+.++++++.+++ .++++. ++||.++.+. .+.+.|.+||.+
T Consensus 194 i~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 194 WDHPALFIPGG---NSPYVSEQYRDDLLAQFPQ--ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp CCSCEEEECBT---TCSTTCGGGHHHHHHHCTT--EEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred cCCCeEEEECC---CCCCCCHHHHHHHHHHCCC--CeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 78999999999 8999999999999998876 666555 4699976543 367778888764
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.7e-14 Score=135.60 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=121.6
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++||++||++++...|. .+.. |..+++++.+|.|- .. ... .
T Consensus 15 ~~~~vv~~hG~~~~~~~~~-~~~~----l~~g~~v~~~d~~g--------~g------------------~s~--~---- 57 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNLKIFG-ELEK----YLEDYNCILLDLKG--------HG------------------ESK--G---- 57 (245)
T ss_dssp CSCEEEEECCTTCCGGGGT-TGGG----GCTTSEEEEECCTT--------ST------------------TCC--S----
T ss_pred CCCEEEEEeCCcccHHHHH-HHHH----HHhCCEEEEecCCC--------CC------------------CCC--C----
Confidence 4678999999999999988 5544 34689999999871 00 000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHH------hHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIF------SQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i------~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
.....+++..+.+.+++ +..+ ...|+|||+||.+|+.++.+. .+. ++
T Consensus 58 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~----~p~-v~ 110 (245)
T 3e0x_A 58 ---------------------QCPSTVYGYIDNVANFITNSEVTKHQK-NITLIGYSMGGAIVLGVALKK----LPN-VR 110 (245)
T ss_dssp ---------------------CCCSSHHHHHHHHHHHHHHCTTTTTCS-CEEEEEETHHHHHHHHHHTTT----CTT-EE
T ss_pred ---------------------CCCcCHHHHHHHHHHHHHhhhhHhhcC-ceEEEEeChhHHHHHHHHHHh----Ccc-cc
Confidence 00124566677777777 6656 668999999999999999840 244 99
Q ss_pred EEEEecCCCCCccc---------------------------------------------------------cccCCCCCC
Q 007311 525 FAILCSGFALHSAE---------------------------------------------------------FEHRSINCP 547 (608)
Q Consensus 525 ~vIlisG~~~~~~~---------------------------------------------------------~~~~~i~~P 547 (608)
++|++++....... .....+++|
T Consensus 111 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 190 (245)
T 3e0x_A 111 KVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIP 190 (245)
T ss_dssp EEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSC
T ss_pred EEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCC
Confidence 99999987765100 123578999
Q ss_pred EEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 548 SLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 548 vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+|+++|+ +|.++|.+.++++++.+++ .+++.. ++||.+.. +..+++.+.|.+||
T Consensus 191 ~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 191 VKAIVAK---DELLTLVEYSEIIKKEVEN--SELKIFETGKHFLLV--VNAKGVAEEIKNFI 245 (245)
T ss_dssp EEEEEET---TCSSSCHHHHHHHHHHSSS--EEEEEESSCGGGHHH--HTHHHHHHHHHTTC
T ss_pred EEEEEeC---CCCCCCHHHHHHHHHHcCC--ceEEEeCCCCcceEE--ecHHHHHHHHHhhC
Confidence 9999999 8999999999999999876 566665 47998755 44566777776664
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-13 Score=134.94 Aligned_cols=170 Identities=18% Similarity=0.192 Sum_probs=113.5
Q ss_pred CccEEEEecCCCCC--hHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFRQN--ASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G~n--a~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+++||++||+|++ ...|. .+.+.|. .++.++.+|.|- .. . + .. .
T Consensus 45 ~~p~vv~~HG~~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~G--------~G------~-------s-----~~-~- 92 (270)
T 3pfb_A 45 IYDMAIIFHGFTANRNTSLLR----EIANSLRDENIASVRFDFNG--------HG------D-------S-----DG-K- 92 (270)
T ss_dssp SEEEEEEECCTTCCTTCHHHH----HHHHHHHHTTCEEEEECCTT--------ST------T-------S-----SS-C-
T ss_pred CCCEEEEEcCCCCCccccHHH----HHHHHHHhCCcEEEEEcccc--------cc------C-------C-----CC-C-
Confidence 46789999999988 55677 5555554 469999999871 00 0 0 00 0
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh----C-CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE----G-PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~----~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
. ....+...++.+..+++.. + ...+|+|||+||.+|+.++.+. +..
T Consensus 93 -----------------~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~ 143 (270)
T 3pfb_A 93 -----------------F-------ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLY-----PDL 143 (270)
T ss_dssp -----------------G-------GGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHC-----TTT
T ss_pred -----------------C-------CccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhC-----chh
Confidence 0 0011222233333333321 2 3457999999999999999853 457
Q ss_pred ccEEEEecCCCCCccc-----------------------------------------cccCCCCCCEEEEEcCCCCCCcc
Q 007311 523 FRFAILCSGFALHSAE-----------------------------------------FEHRSINCPSLHIFGGDLGNDRQ 561 (608)
Q Consensus 523 l~~vIlisG~~~~~~~-----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~ 561 (608)
++++|++++....... .....+++|+|+++|+ +|.+
T Consensus 144 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~ 220 (270)
T 3pfb_A 144 IKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGT---DDTV 220 (270)
T ss_dssp EEEEEEESCCTHHHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEET---TCSS
T ss_pred hcEEEEeccccccchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcC---CCCC
Confidence 9999999987542210 1245789999999999 8999
Q ss_pred cchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHHH
Q 007311 562 VANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 562 Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
+|.+.++++.+.+++ .+++.++ +||.+.... ...+.|.+||.+
T Consensus 221 ~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 266 (270)
T 3pfb_A 221 VSPNASKKYDQIYQN--STLHLIEGADHCFSDSYQKNAVNLTTDFLQN 266 (270)
T ss_dssp SCTHHHHHHHHHCSS--EEEEEETTCCTTCCTHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHhCCC--CeEEEcCCCCcccCccchHHHHHHHHHHHhh
Confidence 999999999999876 6666666 599986431 256677777754
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-13 Score=135.57 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=91.5
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcC
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~ 554 (608)
+++.+.+++|...-. .....+|+|||+||.+|+.++.+. +. ++++|++++............+++|+|+++|+
T Consensus 105 ~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~~~~~~~~~P~lii~G~ 177 (249)
T 2i3d_A 105 SDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRR-----PE-IEGFMSIAPQPNTYDFSFLAPCPSSGLIINGD 177 (249)
T ss_dssp HHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHC-----TT-EEEEEEESCCTTTSCCTTCTTCCSCEEEEEET
T ss_pred HHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcC-----CC-ccEEEEEcCchhhhhhhhhcccCCCEEEEEcC
Confidence 344444444433311 122468999999999999999853 23 99999999987665444567889999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccC---CcEEEEeCC-CCcCCCCh-hhHHHHHHHHHHh
Q 007311 555 DLGNDRQVANQASKELAKAFEEG---CSVIIEHDC-GHIIPTRS-PYIDEIKSFLQRF 607 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~---~~~vv~~~g-GH~ip~~~-~~~~~i~~Fl~~~ 607 (608)
+|.++|.+.++++.+.+... ..+++++++ ||.+...+ ...+.+.+||.+.
T Consensus 178 ---~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~i~~fl~~~ 232 (249)
T 2i3d_A 178 ---ADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRR 232 (249)
T ss_dssp ---TCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccccCHHHHHHHHHHHHHHh
Confidence 89999999999999998741 367777765 99987443 3678889999764
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=139.20 Aligned_cols=169 Identities=18% Similarity=0.233 Sum_probs=115.2
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||++.+...|..++..|.+ .+++++.+|.| ... . +..
T Consensus 28 ~~vvllHG~~~~~~~w~~~~~~l~~---~g~~vi~~D~~--------G~G------~-------S~~------------- 70 (281)
T 3fob_A 28 KPVVLIHGWPLSGRSWEYQVPALVE---AGYRVITYDRR--------GFG------K-------SSQ------------- 70 (281)
T ss_dssp EEEEEECCTTCCGGGGTTTHHHHHH---TTEEEEEECCT--------TST------T-------SCC-------------
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHh---CCCEEEEeCCC--------CCC------C-------CCC-------------
Confidence 5699999999999999965555543 36999999988 110 0 000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
.. ....++...+.+.++++..+ ....|+||||||++++.+++.+ .+..++++|++++
T Consensus 71 -----------~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~----~p~~v~~lvl~~~ 128 (281)
T 3fob_A 71 -----------PW-------EGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTY----GTDRIEKVVFAGA 128 (281)
T ss_dssp -----------CS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHH----CSTTEEEEEEESC
T ss_pred -----------Cc-------cccCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHc----cccceeEEEEecC
Confidence 00 01234555666777777655 4558999999999888877754 2567899999886
Q ss_pred CCCCcc------------------------------------------------c-------------------------
Q 007311 532 FALHSA------------------------------------------------E------------------------- 538 (608)
Q Consensus 532 ~~~~~~------------------------------------------------~------------------------- 538 (608)
..+... +
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (281)
T 3fob_A 129 VPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAF 208 (281)
T ss_dssp CCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHc
Confidence 532100 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEE-eCCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIE-HDCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~-~~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+|||+ +|.++|.+.+ +.+.+.+++ .++++ .++||.++.+. ++.+.|.+||+
T Consensus 209 ~~~d~~~~l~~i~~P~Lii~G~---~D~~~p~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 209 SKTDFRKDLEKFNIPTLIIHGD---SDATVPFEYSGKLTHEAIPN--SKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp HHCCCHHHHTTCCSCEEEEEET---TCSSSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred cccchhhhhhhcCCCEEEEecC---CCCCcCHHHHHHHHHHhCCC--ceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 0135789999999999 8999999866 666777776 44444 45799976532 35677777764
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.3e-14 Score=141.96 Aligned_cols=171 Identities=12% Similarity=0.030 Sum_probs=120.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHH-ccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKK-LKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~-L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++||++||+|++...|. .+.+. +..+++++.+|.| ... . ... .
T Consensus 29 ~~~vv~~HG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~--------G~G------~------------S~~-~---- 73 (309)
T 3u1t_A 29 GQPVLFLHGNPTSSYLWR----NIIPYVVAAGYRAVAPDLI--------GMG------D------------SAK-P---- 73 (309)
T ss_dssp SSEEEEECCTTCCGGGGT----TTHHHHHHTTCEEEEECCT--------TST------T------------SCC-C----
T ss_pred CCEEEEECCCcchhhhHH----HHHHHHHhCCCEEEEEccC--------CCC------C------------CCC-C----
Confidence 468999999999999998 55555 4568999999988 110 0 000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+++..+.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|++
T Consensus 74 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~ 127 (309)
T 3u1t_A 74 ---------------------DIEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLN-----PDRVAAVAFM 127 (309)
T ss_dssp ---------------------SSCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHC-----TTTEEEEEEE
T ss_pred ---------------------CcccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhC-----hHhheEEEEe
Confidence 001235556666666766654 4568999999999999999854 5679999999
Q ss_pred cCCCCCc---------------------------------------------c-----c---------------------
Q 007311 530 SGFALHS---------------------------------------------A-----E--------------------- 538 (608)
Q Consensus 530 sG~~~~~---------------------------------------------~-----~--------------------- 538 (608)
++..+.. . .
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (309)
T 3u1t_A 128 EALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQ 207 (309)
T ss_dssp EESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHH
T ss_pred ccCCCCccccccccccchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHH
Confidence 9764432 0 0
Q ss_pred ----------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--
Q 007311 539 ----------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS-- 594 (608)
Q Consensus 539 ----------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~-- 594 (608)
.....+++|+|+++|+ +|.++|.+.++++.+.+++. ..++..++||.++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~ 283 (309)
T 3u1t_A 208 WPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAE---PGALAPKPVVDYLSENVPNL-EVRFVGAGTHFLQEDHPH 283 (309)
T ss_dssp HHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE---ECSSSCHHHHHHHHHHSTTE-EEEEEEEESSCHHHHCHH
T ss_pred HHHHhccccccchhhhhhhhhhhhcccCCCCEEEEecC---CCCCCCHHHHHHHHhhCCCC-EEEEecCCcccchhhCHH
Confidence 0013468999999999 89999999999999998874 3333356799865432
Q ss_pred hhHHHHHHHHHHh
Q 007311 595 PYIDEIKSFLQRF 607 (608)
Q Consensus 595 ~~~~~i~~Fl~~~ 607 (608)
+..+.|.+||++.
T Consensus 284 ~~~~~i~~fl~~~ 296 (309)
T 3u1t_A 284 LIGQGIADWLRRN 296 (309)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 3567788888764
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-13 Score=137.80 Aligned_cols=172 Identities=17% Similarity=0.235 Sum_probs=119.4
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++||++||++++...|. .+.+.|.+ +++++.+|.|- .. . ...-.
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G--------~G------~------------s~~~~-- 91 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWE----RTIDVLADAGYRVIAVDQVG--------FC------K------------SSKPA-- 91 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGH----HHHHHHHHTTCEEEEECCTT--------ST------T------------SCCCS--
T ss_pred CCCCeEEEEcCCCCcchHHH----HHHHHHHHCCCeEEEeecCC--------CC------C------------CCCCC--
Confidence 45678999999999999999 55555543 69999999881 00 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.....+++..+.+..+++..+ ...+|+|||+||.+|+.+|.+. +..++++|
T Consensus 92 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lv 143 (315)
T 4f0j_A 92 -----------------------HYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLY-----PRQVERLV 143 (315)
T ss_dssp -----------------------SCCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEE
T ss_pred -----------------------ccccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhC-----cHhhheeE
Confidence 001235566666777776654 4558999999999999999854 34699999
Q ss_pred EecCCCCCccc---------------------------------------------------------------------
Q 007311 528 LCSGFALHSAE--------------------------------------------------------------------- 538 (608)
Q Consensus 528 lisG~~~~~~~--------------------------------------------------------------------- 538 (608)
++++.......
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (315)
T 4f0j_A 144 LVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYD 223 (315)
T ss_dssp EESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHH
T ss_pred EecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcC
Confidence 99985421100
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccc----------------hHHHHHHHHHhccCCcEEEEe-CCCCcCCCC
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVA----------------NQASKELAKAFEEGCSVIIEH-DCGHIIPTR 593 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp----------------~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~ 593 (608)
.....+++|+|+++|+ +|.++| .+.++++.+.+++ .++++. ++||.+..+
T Consensus 224 ~~~~~~~~~~l~~~~~P~lii~G~---~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~ 298 (315)
T 4f0j_A 224 MIFTQPVVYELDRLQMPTLLLIGE---KDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQ--ATLVEFPDLGHTPQIQ 298 (315)
T ss_dssp HHHHCCCGGGGGGCCSCEEEEEET---TCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTT--EEEEEETTCCSCHHHH
T ss_pred ccccchhhhhcccCCCCeEEEEec---CCCcCccccccccccccccccchhhhhHHHhhcCC--ceEEEeCCCCcchhhh
Confidence 0245788999999999 899999 7888889888875 566666 469986543
Q ss_pred h--hhHHHHHHHHHH
Q 007311 594 S--PYIDEIKSFLQR 606 (608)
Q Consensus 594 ~--~~~~~i~~Fl~~ 606 (608)
. ...+.|.+||++
T Consensus 299 ~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 299 APERFHQALLEGLQT 313 (315)
T ss_dssp SHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhcc
Confidence 2 255667777653
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=6.5e-14 Score=140.57 Aligned_cols=175 Identities=17% Similarity=0.178 Sum_probs=122.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||+|.+...|. .+.+.|.+.++++.+|.| .+. . +..+ .
T Consensus 20 ~~~vvllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G------~-------S~~~--~-------- 64 (271)
T 1wom_A 20 KASIMFAPGFGCDQSVWN----AVAPAFEEDHRVILFDYV--------GSG------H-------SDLR--A-------- 64 (271)
T ss_dssp SSEEEEECCTTCCGGGGT----TTGGGGTTTSEEEECCCS--------CCS------S-------SCCT--T--------
T ss_pred CCcEEEEcCCCCchhhHH----HHHHHHHhcCeEEEECCC--------CCC------C-------CCCC--c--------
Confidence 367999999999999999 666777777999999988 110 0 0000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+++. ....++...+.+.++++..+ ....|+||||||++|+.+|.+. +..++++|+++
T Consensus 65 -------------~~~~----~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~-----p~~v~~lvl~~ 122 (271)
T 1wom_A 65 -------------YDLN----RYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRR-----PELFSHLVMVG 122 (271)
T ss_dssp -------------CCTT----GGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred -------------cccc----ccccHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhC-----HHhhcceEEEc
Confidence 0000 01245566667777777654 4458999999999999999854 45688999887
Q ss_pred CCCCC------------------------------------------c-cc-----------------------------
Q 007311 531 GFALH------------------------------------------S-AE----------------------------- 538 (608)
Q Consensus 531 G~~~~------------------------------------------~-~~----------------------------- 538 (608)
+.+.. . ..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (271)
T 1wom_A 123 PSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDH 202 (271)
T ss_dssp CCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCC
T ss_pred CCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcch
Confidence 53210 0 00
Q ss_pred -cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHhC
Q 007311 539 -FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRFL 608 (608)
Q Consensus 539 -~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~L 608 (608)
.....+++|+|+|+|+ +|.++|.+.++.+++.+++ .++++. ++||.++.+. .+.+.|.+||.+.+
T Consensus 203 ~~~l~~i~~P~lvi~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 203 REDLSKVTVPSLILQCA---DDIIAPATVGKYMHQHLPY--SSLKQMEARGHCPHMSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp HHHHTTCCSCEEEEEEE---TCSSSCHHHHHHHHHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHhccccCCCEEEEEcC---CCCcCCHHHHHHHHHHCCC--CEEEEeCCCCcCccccCHHHHHHHHHHHHHhcC
Confidence 0124688999999999 8999999999999998876 555555 4699865432 36788888887653
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-13 Score=141.01 Aligned_cols=168 Identities=15% Similarity=0.148 Sum_probs=118.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++.||++||++++...|. .+.+.|..+++++.+|.|- .. . .-..
T Consensus 68 ~p~vv~lhG~~~~~~~~~----~~~~~L~~~~~v~~~D~~G--------~G------~-------------S~~~----- 111 (314)
T 3kxp_A 68 GPLMLFFHGITSNSAVFE----PLMIRLSDRFTTIAVDQRG--------HG------L-------------SDKP----- 111 (314)
T ss_dssp SSEEEEECCTTCCGGGGH----HHHHTTTTTSEEEEECCTT--------ST------T-------------SCCC-----
T ss_pred CCEEEEECCCCCCHHHHH----HHHHHHHcCCeEEEEeCCC--------cC------C-------------CCCC-----
Confidence 568999999999999998 7888888789999999881 00 0 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....+++..+.+..+++..+ ...+|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 112 --------------------~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~ 166 (314)
T 3kxp_A 112 --------------------ETGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKY-----PDLVRSVVAID 166 (314)
T ss_dssp --------------------SSCCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhC-----hhheeEEEEeC
Confidence 001234455555556665543 4568999999999999999854 34699999998
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
T 3kxp_A 167 FTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSD 246 (314)
T ss_dssp CCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSC
T ss_pred CCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcc
Confidence 76432110
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|+++|.+.++++++.+++ .+++..+ +||.+..+. ...+.|.+||+
T Consensus 247 ~~~~~~~i~~P~Lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 247 LVPAYRDVTKPVLIVRGE---SSKLVSAAALAKTSRLRPD--LPVVVVPGADHYVNEVSPEITLKAITNFID 313 (314)
T ss_dssp CHHHHHHCCSCEEEEEET---TCSSSCHHHHHHHHHHCTT--SCEEEETTCCSCHHHHCHHHHHHHHHHHHH
T ss_pred hhhHhhcCCCCEEEEecC---CCccCCHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 0013589999999999 8999999999999999876 4555554 599975432 25667777775
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.2e-13 Score=134.79 Aligned_cols=169 Identities=15% Similarity=0.224 Sum_probs=113.7
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.|||+||++.+...|..++..|.+ .+++++.+|.| .+. . +..+ +
T Consensus 20 ~~vvllHG~~~~~~~w~~~~~~l~~---~g~~vi~~D~~--------G~G------~-------S~~~---~-------- 64 (274)
T 1a8q_A 20 RPVVFIHGWPLNGDAWQDQLKAVVD---AGYRGIAHDRR--------GHG------H-------STPV---W-------- 64 (274)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHH---TTCEEEEECCT--------TST------T-------SCCC---S--------
T ss_pred ceEEEECCCcchHHHHHHHHHHHHh---CCCeEEEEcCC--------CCC------C-------CCCC---C--------
Confidence 4699999999999999954444432 36999999988 110 0 0000 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
...++++..+.+.++++..+ ....|+||||||++|+.++.+. .+..++++|++++
T Consensus 65 --------------------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~p~~v~~lvl~~~ 120 (274)
T 1a8q_A 65 --------------------DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRH----GTGRLRSAVLLSA 120 (274)
T ss_dssp --------------------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHH----CSTTEEEEEEESC
T ss_pred --------------------CCCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHh----hhHheeeeeEecC
Confidence 01235566667777777654 4558999999999999987753 2467999999886
Q ss_pred CCCCc----------------------------------------c------c---------------------------
Q 007311 532 FALHS----------------------------------------A------E--------------------------- 538 (608)
Q Consensus 532 ~~~~~----------------------------------------~------~--------------------------- 538 (608)
..+.. . .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (274)
T 1a8q_A 121 IPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFG 200 (274)
T ss_dssp CCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CCccccccccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhh
Confidence 43210 0 0
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhccCCcEEEEe-CCCCcCCCC--hh--hHHHHHHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEGCSVIIEH-DCGHIIPTR--SP--YIDEIKSFLQ 605 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~~~~vv~~-~gGH~ip~~--~~--~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+. .+.+.+.+++ .++++. ++||.++.+ .+ +.+.|.+||.
T Consensus 201 ~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 201 YTDFTEDLKKFDIPTLVVHGD---DDQVVPIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp HCCCHHHHTTCCSCEEEEEET---TCSSSCGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred cCcHHHHhhcCCCCEEEEecC---cCCCCCcHHHHHHHHhhCCC--ceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 0124689999999999 899999884 4556666665 555555 569998775 22 4566777764
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.5e-13 Score=128.05 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=78.9
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHH
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~ 573 (608)
..+++|||+||.+|+.++.+. +..++++|++++...... .....+++|+|+++|+ +|..+|.+..+.+.+.
T Consensus 115 ~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~-~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~ 185 (223)
T 2o2g_A 115 KVGYFGASTGGGAALVAAAER-----PETVQAVVSRGGRPDLAP-SALPHVKAPTLLIVGG---YDLPVIAMNEDALEQL 185 (223)
T ss_dssp EEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCGGGCT-TTGGGCCSCEEEEEET---TCHHHHHHHHHHHHHC
T ss_pred cEEEEEeCccHHHHHHHHHhC-----CCceEEEEEeCCCCCcCH-HHHhcCCCCEEEEEcc---ccCCCCHHHHHHHHhh
Confidence 568999999999999999853 457999999998765443 2355778999999999 8999986655555544
Q ss_pred hccCCcEEEEeCC-CCcCCCC---hhhHHHHHHHHHHhC
Q 007311 574 FEEGCSVIIEHDC-GHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 574 ~~~~~~~vv~~~g-GH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
..+ .+++.+++ ||.+... ....+.+.+||.+.|
T Consensus 186 ~~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 186 QTS--KRLVIIPRASHLFEEPGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp CSS--EEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHC
T ss_pred CCC--eEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhc
Confidence 333 66666664 9997653 346888999998765
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-13 Score=136.94 Aligned_cols=166 Identities=17% Similarity=0.220 Sum_probs=115.2
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
.|||+||++.+...|. .+.+.|.+ +++++.+|.| .+. . +..+.
T Consensus 25 pvvllHG~~~~~~~~~----~~~~~L~~~g~~vi~~D~~--------G~G------~-------S~~~~----------- 68 (277)
T 1brt_A 25 PVVLIHGFPLSGHSWE----RQSAALLDAGYRVITYDRR--------GFG------Q-------SSQPT----------- 68 (277)
T ss_dssp EEEEECCTTCCGGGGH----HHHHHHHHTTCEEEEECCT--------TST------T-------SCCCS-----------
T ss_pred eEEEECCCCCcHHHHH----HHHHHHhhCCCEEEEeCCC--------CCC------C-------CCCCC-----------
Confidence 4999999999999999 44455543 6999999988 110 0 00000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCC-CccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEI-DFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~-~l~~vIlis 530 (608)
...+++...+.+.++++..+ ....|+||||||++|+.+|.++ +. .++++|+++
T Consensus 69 --------------------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~~v~~lvl~~ 123 (277)
T 1brt_A 69 --------------------TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSY-----GTARIAKVAFLA 123 (277)
T ss_dssp --------------------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHH-----CSTTEEEEEEES
T ss_pred --------------------CCccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHc-----CcceEEEEEEec
Confidence 01235556666777776654 4458999999999999999865 44 799999988
Q ss_pred CCCCCc------------------------------------------------c-c-----------------------
Q 007311 531 GFALHS------------------------------------------------A-E----------------------- 538 (608)
Q Consensus 531 G~~~~~------------------------------------------------~-~----------------------- 538 (608)
+..+.. . .
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (277)
T 1brt_A 124 SLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPT 203 (277)
T ss_dssp CCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGG
T ss_pred CcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHH
Confidence 643210 0 0
Q ss_pred -------cccCCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+.+ +++++.+++ .++++. ++||.++.+. .+.+.|.+||.
T Consensus 204 ~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 204 TWYTDFRADIPRIDVPALILHGT---GDRTLPIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276 (277)
T ss_dssp GTTCCCTTTGGGCCSCEEEEEET---TCSSSCGGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHhccchhhcccCCCCeEEEecC---CCccCChHHHHHHHHHHCCC--CcEEEeCCCCcchhhhCHHHHHHHHHHHHh
Confidence 0124578999999999 8999999888 889988876 555555 4699875432 25667777775
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.51 E-value=6.2e-14 Score=140.29 Aligned_cols=167 Identities=13% Similarity=0.041 Sum_probs=117.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++||++||++++...|. .+.+.|.++++++.+|.|- .. . .....
T Consensus 32 ~~~vl~lHG~~~~~~~~~----~~~~~l~~~~~v~~~d~~G--------~G------~------------s~~~~----- 76 (299)
T 3g9x_A 32 GTPVLFLHGNPTSSYLWR----NIIPHVAPSHRCIAPDLIG--------MG------K------------SDKPD----- 76 (299)
T ss_dssp SCCEEEECCTTCCGGGGT----TTHHHHTTTSCEEEECCTT--------ST------T------------SCCCC-----
T ss_pred CCEEEEECCCCccHHHHH----HHHHHHccCCEEEeeCCCC--------CC------C------------CCCCC-----
Confidence 457999999999999999 6666667789999999871 00 0 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....+++..+.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 77 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~ 130 (299)
T 3g9x_A 77 ---------------------LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRN-----PERVKGIACME 130 (299)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHS-----GGGEEEEEEEE
T ss_pred ---------------------CcccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhc-----chheeEEEEec
Confidence 01245566667777777654 4568999999999999999854 45699999998
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+..+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (299)
T 3g9x_A 131 FIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELP 210 (299)
T ss_dssp ECCCBSSGGGSCGGGHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSC
T ss_pred CCcchhhhhhcchHHHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhh
Confidence 55443300
Q ss_pred ----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHH
Q 007311 539 ----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIK 601 (608)
Q Consensus 539 ----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~ 601 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .++++.+ +||.+.. +..+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~--e~p~~~~ 283 (299)
T 3g9x_A 211 IAGEPANIVALVEAYMNWLHQSPVPKLLFWGT---PGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQE--DNPDLIG 283 (299)
T ss_dssp BTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE---ECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHH--HCHHHHH
T ss_pred hccccchhhhhhhhhhhhcccCCCCeEEEecC---CCCCCCHHHHHHHHhhCCC--CeEEEeCCCCCcchh--cCHHHHH
Confidence 0014568999999999 8999999999999999976 5555554 7999765 3334444
Q ss_pred HHHHH
Q 007311 602 SFLQR 606 (608)
Q Consensus 602 ~Fl~~ 606 (608)
+.|.+
T Consensus 284 ~~i~~ 288 (299)
T 3g9x_A 284 SEIAR 288 (299)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-13 Score=138.68 Aligned_cols=170 Identities=16% Similarity=0.148 Sum_probs=118.1
Q ss_pred cEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 373 LRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 373 ~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++||||||+| ++...|..++ .+.|.+.++++.+|.| .+. . + .. +.
T Consensus 34 ~~vvllHG~~~~~~~~~~w~~~~---~~~L~~~~~vi~~D~~--------G~G------~-------S-----~~---~~ 81 (286)
T 2puj_A 34 ETVIMLHGGGPGAGGWSNYYRNV---GPFVDAGYRVILKDSP--------GFN------K-------S-----DA---VV 81 (286)
T ss_dssp SEEEEECCCSTTCCHHHHHTTTH---HHHHHTTCEEEEECCT--------TST------T-------S-----CC---CC
T ss_pred CcEEEECCCCCCCCcHHHHHHHH---HHHHhccCEEEEECCC--------CCC------C-------C-----CC---CC
Confidence 5799999999 8888898444 0455556999999988 110 0 0 00 00
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ ....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+
T Consensus 82 ----------------~------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~-----p~~v~~lvl 134 (286)
T 2puj_A 82 ----------------M------DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEY-----PDRIGKLIL 134 (286)
T ss_dssp ----------------C------SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred ----------------C------cCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhC-----hHhhheEEE
Confidence 0 01245666777777777765 4558999999999999999965 457899999
Q ss_pred ecCCCCC-------c-------------c---------------------c------c----------------------
Q 007311 529 CSGFALH-------S-------------A---------------------E------F---------------------- 539 (608)
Q Consensus 529 isG~~~~-------~-------------~---------------------~------~---------------------- 539 (608)
+++.... . . + .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (286)
T 2puj_A 135 MGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLS 214 (286)
T ss_dssp ESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGG
T ss_pred ECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhcc
Confidence 8864310 0 0 0 0
Q ss_pred ------ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 540 ------EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 540 ------~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
....+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. .+.+.|.+||.+
T Consensus 215 ~~~~~~~l~~i~~P~Lii~G~---~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 215 TWDVTARLGEIKAKTFITWGR---DDRFVPLDHGLKLLWNIDD--ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp GGCCGGGGGGCCSCEEEEEET---TCSSSCTHHHHHHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred ccchhhHHhhcCCCEEEEEEC---CCCccCHHHHHHHHHHCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 123578999999999 8999999999999999876 555555 5699875532 256778888864
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.5e-13 Score=135.74 Aligned_cols=167 Identities=22% Similarity=0.247 Sum_probs=116.7
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCCc
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGK 453 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 453 (608)
+||||||++++...|. .+.+.|.+.++++.+|.| .+. ......
T Consensus 18 ~vvllHG~~~~~~~~~----~~~~~L~~~~~vi~~Dl~--------G~G------------------~S~~~~------- 60 (269)
T 2xmz_A 18 VLVFLHGFLSDSRTYH----NHIEKFTDNYHVITIDLP--------GHG------------------EDQSSM------- 60 (269)
T ss_dssp EEEEECCTTCCGGGGT----TTHHHHHTTSEEEEECCT--------TST------------------TCCCCT-------
T ss_pred eEEEEcCCCCcHHHHH----HHHHHHhhcCeEEEecCC--------CCC------------------CCCCCC-------
Confidence 5999999999999999 555556556999999988 110 000000
Q ss_pred cccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 454 RETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 454 ~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
+ ....++..++.+.++++..+ ....|+||||||++|+.+|.+. +..++++|++++.
T Consensus 61 ------------~------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~ 117 (269)
T 2xmz_A 61 ------------D------ETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAING-----HIPISNLILESTS 117 (269)
T ss_dssp ------------T------SCCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHC-----SSCCSEEEEESCC
T ss_pred ------------C------CccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhC-----chheeeeEEEcCC
Confidence 0 01246667777888887765 4558999999999999999854 5678999998854
Q ss_pred CCC--------------------------------------c-----cc-------------------------------
Q 007311 533 ALH--------------------------------------S-----AE------------------------------- 538 (608)
Q Consensus 533 ~~~--------------------------------------~-----~~------------------------------- 538 (608)
+.. . ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (269)
T 2xmz_A 118 PGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMP 197 (269)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSC
T ss_pred cccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCc
Confidence 311 0 00
Q ss_pred ---cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+|+|+ +|.++|.+..+ +++.+++ .++++. ++||.++.+. .+.+.|.+||.+
T Consensus 198 ~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~-~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 265 (269)
T 2xmz_A 198 NLWPRLKEIKVPTLILAGE---YDEKFVQIAKK-MANLIPN--SKCKLISATGHTIHVEDSDEFDTMILGFLKE 265 (269)
T ss_dssp CCGGGGGGCCSCEEEEEET---TCHHHHHHHHH-HHHHSTT--EEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred cHHHHHHhcCCCEEEEEeC---CCcccCHHHHH-HHhhCCC--cEEEEeCCCCCChhhcCHHHHHHHHHHHHHH
Confidence 0123578999999999 89999887755 8777765 566666 4699976533 266778888865
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.3e-13 Score=136.10 Aligned_cols=170 Identities=16% Similarity=0.147 Sum_probs=119.4
Q ss_pred ccEEEEecCCCCChH-HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNAS-SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~-~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+.||||||+++++. .|. .+.+.|..+++++.+|.| .+. . +.. ..
T Consensus 25 ~~~vvllHG~~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G------~-------S~~-----~~---- 70 (286)
T 2yys_A 25 GPALFVLHGGPGGNAYVLR----EGLQDYLEGFRVVYFDQR--------GSG------R-------SLE-----LP---- 70 (286)
T ss_dssp SCEEEEECCTTTCCSHHHH----HHHGGGCTTSEEEEECCT--------TST------T-------SCC-----CC----
T ss_pred CCEEEEECCCCCcchhHHH----HHHHHhcCCCEEEEECCC--------CCC------C-------CCC-----Cc----
Confidence 457999999999999 899 677778778999999988 110 0 000 00
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
-+. ....++...+.+.++++..+ ....|+||||||++|+.+|.++ +. ++++|++
T Consensus 71 --------------~~~-----~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~-v~~lvl~ 125 (286)
T 2yys_A 71 --------------QDP-----RLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRF-----PQ-AEGAILL 125 (286)
T ss_dssp --------------SCG-----GGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHC-----TT-EEEEEEE
T ss_pred --------------cCc-----ccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhC-----cc-hheEEEe
Confidence 000 01235666677777777665 4558999999999999999854 56 9999998
Q ss_pred cCCCC--C----c------------------------------------c---------------------------c--
Q 007311 530 SGFAL--H----S------------------------------------A---------------------------E-- 538 (608)
Q Consensus 530 sG~~~--~----~------------------------------------~---------------------------~-- 538 (608)
++... . . . .
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (286)
T 2yys_A 126 APWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGL 205 (286)
T ss_dssp SCCCBHHHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTG
T ss_pred CCccCcHHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhccccc
Confidence 87420 0 0 0 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+|+|+ +|.++|.+ ++++++ +++. ..++..++||.++.+. .+.+.|.+||.+
T Consensus 206 ~~~~~~~~l~~i~~P~lvi~G~---~D~~~~~~-~~~~~~-~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 206 WRLDYTPYLTPERRPLYVLVGE---RDGTSYPY-AEEVAS-RLRA-PIRVLPEAGHYLWIDAPEAFEEAFKEALAA 275 (286)
T ss_dssp GGCBCGGGCCCCSSCEEEEEET---TCTTTTTT-HHHHHH-HHTC-CEEEETTCCSSHHHHCHHHHHHHHHHHHHT
T ss_pred ccCChhhhhhhcCCCEEEEEeC---CCCcCCHh-HHHHHh-CCCC-CEEEeCCCCCCcChhhHHHHHHHHHHHHHh
Confidence 0124578999999999 89999999 999999 8763 3344445799976543 367888888875
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.3e-13 Score=134.81 Aligned_cols=165 Identities=16% Similarity=0.138 Sum_probs=118.4
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
..+.||++||+|.+...|......|.+ .++.++.+|.|.. .
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~---~G~~v~~~d~~~s-----------------------------~------- 88 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWAS---HGFVVAAAETSNA-----------------------------G------- 88 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHH---HTCEEEEECCSCC-----------------------------T-------
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHh---CCeEEEEecCCCC-----------------------------c-------
Confidence 568899999999999999844444443 3799999987710 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHh--------H-hCCceEEEecChhHHHHHHHHHHHhhhhCCC
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS--------Q-EGPFDGILGFSQGAAMAASVCAQWERLKGEI 521 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~--------~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~ 521 (608)
...++...++++.+... . .....+|+||||||.+|+.++. ..
T Consensus 89 ----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~-------~~ 139 (258)
T 2fx5_A 89 ----------------------TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQ-------DT 139 (258)
T ss_dssp ----------------------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHTT-------ST
T ss_pred ----------------------cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhcc-------Cc
Confidence 01234556667666543 1 1133479999999999999883 46
Q ss_pred CccEEEEecCCCCC--ccccccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhccCCcEEEEeC-CCCcCCCC--hh
Q 007311 522 DFRFAILCSGFALH--SAEFEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEGCSVIIEHD-CGHIIPTR--SP 595 (608)
Q Consensus 522 ~l~~vIlisG~~~~--~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~~~~vv~~~-gGH~ip~~--~~ 595 (608)
.++++|+++++... ........+++|+|+++|+ +|.++|.+. ++++.+... ...++++++ +||.+... ..
T Consensus 140 ~v~~~v~~~~~~~~~~~~~~~~~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~H~~~~~~~~~ 215 (258)
T 2fx5_A 140 RVRTTAPIQPYTLGLGHDSASQRRQQGPMFLMSGG---GDTIAFPYLNAQPVYRRAN-VPVFWGERRYVSHFEPVGSGGA 215 (258)
T ss_dssp TCCEEEEEEECCSSTTCCGGGGGCCSSCEEEEEET---TCSSSCHHHHTHHHHHHCS-SCEEEEEESSCCTTSSTTTCGG
T ss_pred CeEEEEEecCcccccccchhhhccCCCCEEEEEcC---CCcccCchhhHHHHHhccC-CCeEEEEECCCCCccccchHHH
Confidence 79999999987652 1223456789999999999 899999886 888877743 235666665 59997664 35
Q ss_pred hHHHHHHHHHHh
Q 007311 596 YIDEIKSFLQRF 607 (608)
Q Consensus 596 ~~~~i~~Fl~~~ 607 (608)
..+.+.+||.+.
T Consensus 216 ~~~~i~~fl~~~ 227 (258)
T 2fx5_A 216 YRGPSTAWFRFQ 227 (258)
T ss_dssp GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788999999854
|
| >2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-14 Score=136.17 Aligned_cols=119 Identities=18% Similarity=0.320 Sum_probs=82.8
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchH-HHHhh--hhhc
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPT-WIDNN--AEQL 204 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~-~~~~~--~~~~ 204 (608)
..+.|+++++.+++++. .....++++|||||++.||+.|||+| +++.+.. ++.. ++... +...
T Consensus 22 ~~~~is~~el~~~l~~~-------~~~~~~~~~liDvR~~~ey~~ghIpg----Ainip~~---~l~~~~~~~~~~~~~~ 87 (175)
T 2a2k_A 22 DLKYISPETMVALLTGK-------FSNIVDKFVIVDCRYPYEYEGGHIKT----AVNLPLE---RDAESFLLKSPIAPCS 87 (175)
T ss_dssp TSCEECHHHHHHHHTTT-------TTTTEEEEEEEECSCHHHHHTCEETT----CEECCSH---HHHHHHHHSSCCCC--
T ss_pred CCceeCHHHHHHHHhcc-------cccCCCCEEEEECCCHHHHcCCcCCC----cEECChh---HHHHHhhhhhhhcccc
Confidence 35789999999999641 00011368999999999999999999 5555422 2221 22211 1123
Q ss_pred CCCeEEE--EcC-CCccHHHHHHHHHhc--------CCCCCcEEEcCccHHHHHHhCCCCCeeceeeee
Q 007311 205 QGKHVLM--YCT-GGIRCEMASAYVRSK--------GAGFENVFQLYGGIQRYLEQFPDGGFFKGKNFV 262 (608)
Q Consensus 205 k~k~Iv~--yCt-gGiR~~~a~~~L~~~--------~~Gf~nV~~L~GGi~~w~~~~~~~~~~~G~~fV 262 (608)
++++|++ ||. +|.||..|+.+|+++ ..||+|||+|+||+.+|.++.+ .+..+..||
T Consensus 88 ~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~--~~~~~~~y~ 154 (175)
T 2a2k_A 88 LDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHP--NFCEPQDYR 154 (175)
T ss_dssp --CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCG--GGEESSCCC
T ss_pred CCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCc--cccCCCCcc
Confidence 7888855 698 999999999999863 1499999999999999987743 456666665
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-13 Score=135.85 Aligned_cols=170 Identities=13% Similarity=0.111 Sum_probs=115.5
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||||||++.+...|. .+.+.|. .+++++.+|.| .+. . +..+ .
T Consensus 9 ~g~~vvllHG~~~~~~~w~----~~~~~L~~~g~~via~Dl~--------G~G------~-------S~~~-----~--- 55 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWY----KLKPLLESAGHKVTAVDLS--------AAG------I-------NPRR-----L--- 55 (264)
T ss_dssp CCCEEEEECCTTCCGGGGT----THHHHHHHTTCEEEEECCT--------TST------T-------CSCC-----G---
T ss_pred CCCeEEEECCCccccchHH----HHHHHHHhCCCEEEEeecC--------CCC------C-------CCCC-----c---
Confidence 4567999999999999999 4445553 47999999988 110 0 0000 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.....+++..+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|
T Consensus 56 ----------------------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~-----p~~v~~lv 108 (264)
T 2wfl_A 56 ----------------------DEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETY-----PEKISVAV 108 (264)
T ss_dssp ----------------------GGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHC-----GGGEEEEE
T ss_pred ----------------------ccccCHHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhC-----hhhhceeE
Confidence 001246667777888888764 4568999999999999999854 45677888
Q ss_pred EecCCCCCc----------------------------------c-------c-----------------------c----
Q 007311 528 LCSGFALHS----------------------------------A-------E-----------------------F---- 539 (608)
Q Consensus 528 lisG~~~~~----------------------------------~-------~-----------------------~---- 539 (608)
++++..+.. . . .
T Consensus 109 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (264)
T 2wfl_A 109 FMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLF 188 (264)
T ss_dssp EESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECC
T ss_pred EEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCccc
Confidence 776532100 0 0 0
Q ss_pred -------c----cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHH
Q 007311 540 -------E----HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 540 -------~----~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
. ....++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+.+ +.+.|.+|+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 189 FQDLAKAKKFSTERYGSVKRAYIFCN---EDKSFPVEFQKWFVESVGA--DKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHTTSCCCCTTTGGGSCEEEEEET---TCSSSCHHHHHHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred ccccccccccChHHhCCCCeEEEEeC---CcCCCCHHHHHHHHHhCCC--ceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 0 00136899999999 8999999999999999876 555555 67999765332 5566666653
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3e-13 Score=135.57 Aligned_cols=170 Identities=13% Similarity=0.073 Sum_probs=120.4
Q ss_pred CccEEEEecCCCCChHHHH-HHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFK-GRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~-~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++|||+||++++...|. ..+..|. ..+++++.+|.|- . .....
T Consensus 42 ~~~~vv~lHG~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G--------~-----------------------G~s~~ 87 (293)
T 3hss_A 42 TGDPVVFIAGRGGAGRTWHPHQVPAFL---AAGYRCITFDNRG--------I-----------------------GATEN 87 (293)
T ss_dssp SSEEEEEECCTTCCGGGGTTTTHHHHH---HTTEEEEEECCTT--------S-----------------------GGGTT
T ss_pred CCCEEEEECCCCCchhhcchhhhhhHh---hcCCeEEEEccCC--------C-----------------------CCCCC
Confidence 3467999999999999998 3444443 4589999999881 0 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ ....+++..+.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|+
T Consensus 88 -----------------~-----~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl 140 (293)
T 3hss_A 88 -----------------A-----EGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVA-----PELVSSAVL 140 (293)
T ss_dssp -----------------C-----CSCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred -----------------c-----ccCCHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHC-----hHHHHhhhe
Confidence 0 01134555666666666654 4558999999999999999854 456999999
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++.......
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (293)
T 3hss_A 141 MATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQ 220 (293)
T ss_dssp ESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCS
T ss_pred ecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccc
Confidence 9987543210
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .++++.+ +||.+..+. ...+.|.+||++
T Consensus 221 ~~~~~~l~~i~~P~lii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 221 TNRLPAYRNIAAPVLVIGFA---DDVVTPPYLGREVADALPN--GRYLQIPDAGHLGFFERPEAVNTAMLKFFAS 290 (293)
T ss_dssp SCCHHHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHSTT--EEEEEETTCCTTHHHHSHHHHHHHHHHHHHT
T ss_pred cchHHHHhhCCCCEEEEEeC---CCCCCCHHHHHHHHHHCCC--ceEEEeCCCcchHhhhCHHHHHHHHHHHHHh
Confidence 0125688999999999 8999999999999999876 5666665 599865432 356778888865
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-13 Score=135.10 Aligned_cols=169 Identities=18% Similarity=0.210 Sum_probs=112.5
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.|||+||++.+...|..++..|.+ .+++++.+|.| .+. . +..+
T Consensus 20 ~~vvllHG~~~~~~~~~~~~~~L~~---~g~~vi~~D~~--------G~G------~-------S~~~------------ 63 (273)
T 1a8s_A 20 QPIVFSHGWPLNADSWESQMIFLAA---QGYRVIAHDRR--------GHG------R-------SSQP------------ 63 (273)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHH---TTCEEEEECCT--------TST------T-------SCCC------------
T ss_pred CEEEEECCCCCcHHHHhhHHhhHhh---CCcEEEEECCC--------CCC------C-------CCCC------------
Confidence 5699999999999999944444432 36999999988 110 0 0000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
. ....++...+.+.++++..+ ....|+||||||.+|+.++.++ .+..++++|++++
T Consensus 64 ------------~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~p~~v~~lvl~~~ 120 (273)
T 1a8s_A 64 ------------W-------SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRH----GTARVAKAGLISA 120 (273)
T ss_dssp ------------S-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHH----CSTTEEEEEEESC
T ss_pred ------------C-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhc----CchheeEEEEEcc
Confidence 0 01235556666777777654 4558999999999999977753 2467899999886
Q ss_pred CCCCc---------------------------------------c----------c------------------------
Q 007311 532 FALHS---------------------------------------A----------E------------------------ 538 (608)
Q Consensus 532 ~~~~~---------------------------------------~----------~------------------------ 538 (608)
..+.. . .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (273)
T 1a8s_A 121 VPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAF 200 (273)
T ss_dssp CCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cCcccccCccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHH
Confidence 43210 0 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+ ..+.+.+.+++ .++++. ++||.++.+. ++.+.|.+||.
T Consensus 201 ~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 201 SETDFTEDLKKIDVPTLVVHGD---ADQVVPIEASGIASAALVKG--STLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHCCCHHHHHTCCSCEEEEEET---TCSSSCSTTTHHHHHHHSTT--CEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred hccChhhhhhcCCCCEEEEECC---CCccCChHHHHHHHHHhCCC--cEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence 0123688999999999 89999987 44556666665 555555 4699875432 35677788875
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.49 E-value=2.3e-13 Score=137.20 Aligned_cols=170 Identities=16% Similarity=0.149 Sum_probs=115.0
Q ss_pred ccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 372 KLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 372 ~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+++||||||+| ++...|. .+.+.|.+.++++.+|.| ... . ...-.
T Consensus 29 ~p~vvllHG~~~~~~~~~~~~----~~~~~L~~~~~vi~~D~~--------G~G------~------------S~~~~-- 76 (285)
T 1c4x_A 29 SPAVVLLHGAGPGAHAASNWR----PIIPDLAENFFVVAPDLI--------GFG------Q------------SEYPE-- 76 (285)
T ss_dssp SCEEEEECCCSTTCCHHHHHG----GGHHHHHTTSEEEEECCT--------TST------T------------SCCCS--
T ss_pred CCEEEEEeCCCCCCcchhhHH----HHHHHHhhCcEEEEecCC--------CCC------C------------CCCCC--
Confidence 35699999998 7788888 444555556999999988 110 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHH----HHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVS----LAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s----~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
. ....++.. .+.+.++++..+ ....|+||||||++|+.+|.++ +..+
T Consensus 77 -------------~----------~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v 128 (285)
T 1c4x_A 77 -------------T----------YPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEA-----PERF 128 (285)
T ss_dssp -------------S----------CCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHC-----GGGE
T ss_pred -------------C----------cccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhC-----hHHh
Confidence 0 00123444 566666666654 4458999999999999999854 4568
Q ss_pred cEEEEecCCCCC------------------------------------c--cc---------------------------
Q 007311 524 RFAILCSGFALH------------------------------------S--AE--------------------------- 538 (608)
Q Consensus 524 ~~vIlisG~~~~------------------------------------~--~~--------------------------- 538 (608)
+++|++++.... . ..
T Consensus 129 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (285)
T 1c4x_A 129 DKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMK 208 (285)
T ss_dssp EEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred heEEEeccCCCCCCccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhcccc
Confidence 889988764310 0 00
Q ss_pred ----------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 ----------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 ----------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. ++.+.|.+||.
T Consensus 209 ~~~~~~~~~~~~l~~i~~P~lii~G~---~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 283 (285)
T 1c4x_A 209 AGMESLVIPPATLGRLPHDVLVFHGR---QDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFR 283 (285)
T ss_dssp SCCGGGCCCHHHHTTCCSCEEEEEET---TCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred ccccccccchhhhccCCCCEEEEEeC---CCeeeCHHHHHHHHHhCCC--ceEEEeCCCCcchhhcCHHHHHHHHHHHHh
Confidence 0113678999999999 8999999999999998876 555555 5699875532 35677788876
Q ss_pred H
Q 007311 606 R 606 (608)
Q Consensus 606 ~ 606 (608)
+
T Consensus 284 ~ 284 (285)
T 1c4x_A 284 A 284 (285)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-13 Score=141.25 Aligned_cols=168 Identities=14% Similarity=0.143 Sum_probs=120.0
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||++++...|. .+...|.+.+++|.+|.| +.. . + .+ +
T Consensus 30 ~pvvllHG~~~~~~~w~----~~~~~L~~~~~via~Dl~--------G~G------~-------S-----~~---~---- 72 (316)
T 3afi_E 30 PVVLFLHGNPTSSHIWR----NILPLVSPVAHCIAPDLI--------GFG------Q-------S-----GK---P---- 72 (316)
T ss_dssp CEEEEECCTTCCGGGGT----TTHHHHTTTSEEEEECCT--------TST------T-------S-----CC---C----
T ss_pred CeEEEECCCCCchHHHH----HHHHHHhhCCEEEEECCC--------CCC------C-------C-----CC---C----
Confidence 47999999999999999 555566667999999988 110 0 0 00 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
.....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|++++
T Consensus 73 -------------------~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~-----P~~v~~lvl~~~ 128 (316)
T 3afi_E 73 -------------------DIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARR-----PDFVRGLAFMEF 128 (316)
T ss_dssp -------------------SSCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHC-----TTTEEEEEEEEE
T ss_pred -------------------CCCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHC-----HHhhhheeeecc
Confidence 001246667777888888765 4568999999999999999854 567999999875
Q ss_pred CCCC------c----------------------------------------------c----c-----------------
Q 007311 532 FALH------S----------------------------------------------A----E----------------- 538 (608)
Q Consensus 532 ~~~~------~----------------------------------------------~----~----------------- 538 (608)
..+. . . .
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (316)
T 3afi_E 129 IRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRR 208 (316)
T ss_dssp CCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGH
T ss_pred CCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchh
Confidence 2210 0 0 0
Q ss_pred ------cc--------------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCC
Q 007311 539 ------FE--------------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIP 591 (608)
Q Consensus 539 ------~~--------------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip 591 (608)
.. ...+++|+|+|+|+ +|.++|.+.++++.+.+++ .++++. ++||.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~~~ 283 (316)
T 3afi_E 209 PVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGE---PGALVSPEFAERFAASLTR--CALIRLGAGLHYLQ 283 (316)
T ss_dssp HHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE---ECSSSCHHHHHHHHHHSSS--EEEEEEEEECSCHH
T ss_pred HHHHHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecC---CCCccCHHHHHHHHHhCCC--CeEEEcCCCCCCch
Confidence 00 01268999999999 8999999999999999886 455444 6799976
Q ss_pred CChh--hHHHHHHHHHH
Q 007311 592 TRSP--YIDEIKSFLQR 606 (608)
Q Consensus 592 ~~~~--~~~~i~~Fl~~ 606 (608)
.+.+ +.+.|.+||.+
T Consensus 284 ~e~p~~~~~~i~~fl~~ 300 (316)
T 3afi_E 284 EDHADAIGRSVAGWIAG 300 (316)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHhh
Confidence 6433 66788888865
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.4e-13 Score=136.22 Aligned_cols=175 Identities=15% Similarity=0.153 Sum_probs=114.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++|||+||++++...|. .+.+.|..+++++.+|.| ... . + ..+...
T Consensus 32 ~~~~vv~lHG~~~~~~~~~----~~~~~l~~~~~v~~~D~~--------G~G------~-S------~~~~~~------- 79 (306)
T 3r40_A 32 DGPPLLLLHGFPQTHVMWH----RVAPKLAERFKVIVADLP--------GYG------W-S------DMPESD------- 79 (306)
T ss_dssp CSSEEEEECCTTCCGGGGG----GTHHHHHTTSEEEEECCT--------TST------T-S------CCCCCC-------
T ss_pred CCCeEEEECCCCCCHHHHH----HHHHHhccCCeEEEeCCC--------CCC------C-C------CCCCCC-------
Confidence 3468999999999999999 556666668999999988 110 0 0 000000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.+ .....+++..+.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|++
T Consensus 80 --------------~~-----~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~ 135 (306)
T 3r40_A 80 --------------EQ-----HTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDS-----PGRLSKLAVL 135 (306)
T ss_dssp --------------TT-----CGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEE
T ss_pred --------------cc-----cCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhC-----hhhccEEEEe
Confidence 00 012345666677777777654 4458999999999999999854 4569999999
Q ss_pred cCCCCCc------------------------------------------------------c-c----------c-----
Q 007311 530 SGFALHS------------------------------------------------------A-E----------F----- 539 (608)
Q Consensus 530 sG~~~~~------------------------------------------------------~-~----------~----- 539 (608)
++.++.. . + .
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (306)
T 3r40_A 136 DILPTYEYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRH 215 (306)
T ss_dssp SCCCHHHHHHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHH
T ss_pred cCCCCccchhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcc
Confidence 9753200 0 0 0
Q ss_pred ----------------------ccCCCCCCEEEEEcCCCCCCcccc-hHHHHHHHHHhccCCcEEEEeCCCCcCCCChh-
Q 007311 540 ----------------------EHRSINCPSLHIFGGDLGNDRQVA-NQASKELAKAFEEGCSVIIEHDCGHIIPTRSP- 595 (608)
Q Consensus 540 ----------------------~~~~i~~PvL~i~G~~~~~D~~Vp-~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~- 595 (608)
....+++|+|+|+|+ +|.++| ....+.+.+..++ ..+++.++||.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~e~p~ 290 (306)
T 3r40_A 216 VMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGA---SGIAQSAATPLDVWRKWASD--VQGAPIESGHFLPEEAPD 290 (306)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEET---TCC------CHHHHHHHBSS--EEEEEESSCSCHHHHSHH
T ss_pred hhhHHHHhcccccchhhhhhhhhccCCCcceEEEEec---CCcccCchhHHHHHHhhcCC--CeEEEecCCcCchhhChH
Confidence 237899999999999 899998 4555556666655 55555588998655322
Q ss_pred -hHHHHHHHHHH
Q 007311 596 -YIDEIKSFLQR 606 (608)
Q Consensus 596 -~~~~i~~Fl~~ 606 (608)
..+.|.+||++
T Consensus 291 ~~~~~i~~fl~~ 302 (306)
T 3r40_A 291 QTAEALVRFFSA 302 (306)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 56777888764
|
| >1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-14 Score=139.78 Aligned_cols=119 Identities=18% Similarity=0.343 Sum_probs=84.9
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchH-HHHhh--hhhc
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPT-WIDNN--AEQL 204 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~-~~~~~--~~~~ 204 (608)
....|+++++.+++++.. ....++++|||||++.||+.|||+| +++.+.. ++.. ++... +...
T Consensus 42 ~~~~Is~~el~~~l~~~~-------~~~~~~~~lIDvR~~~Ey~~gHIpG----Ainip~~---~l~~~~~~~~~~l~~~ 107 (211)
T 1qb0_A 42 DLKYISPETMVALLTGKF-------SNIVDKFVIVDCRYPYEYEGGHIKT----AVNLPLE---RDAESFLLKSPIAPCS 107 (211)
T ss_dssp TSCEECHHHHHHHHTTTT-------TTTEEEEEEEECSCHHHHHTCEETT----CEECCSH---HHHHHHHHTTTCCCSS
T ss_pred CCCeeCHHHHHHHHhccc-------ccCCCCEEEEECCCHHHHccCcCCC----CEECCch---HHHHHhhhhhhhcccc
Confidence 357899999999996510 0001368999999999999999999 5555422 2221 22211 1123
Q ss_pred CCCeE--EEEcC-CCccHHHHHHHHHhc--------CCCCCcEEEcCccHHHHHHhCCCCCeeceeeee
Q 007311 205 QGKHV--LMYCT-GGIRCEMASAYVRSK--------GAGFENVFQLYGGIQRYLEQFPDGGFFKGKNFV 262 (608)
Q Consensus 205 k~k~I--v~yCt-gGiR~~~a~~~L~~~--------~~Gf~nV~~L~GGi~~w~~~~~~~~~~~G~~fV 262 (608)
++++| |+||. +|.|+..|+.+|++. ..||+|||.|.|||.+|.++.+ .+..+..||
T Consensus 108 ~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~--~~~~~~~y~ 174 (211)
T 1qb0_A 108 LDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHP--NFCEPQDYR 174 (211)
T ss_dssp TTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCG--GGEESSCCC
T ss_pred CCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCc--cccCCCCcc
Confidence 78888 88999 999999999999862 1499999999999999987643 345555554
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.49 E-value=9.6e-14 Score=132.74 Aligned_cols=173 Identities=14% Similarity=0.186 Sum_probs=112.6
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++||++||++++...|... .+.+.|. .++.++.+|.|-. . .....
T Consensus 30 ~~~~~vv~~hG~~~~~~~~~~~--~~~~~l~~~G~~v~~~d~~g~--------g-------------------~s~~~-- 78 (210)
T 1imj_A 30 QARFSVLLLHGIRFSSETWQNL--GTLHRLAQAGYRAVAIDLPGL--------G-------------------HSKEA-- 78 (210)
T ss_dssp CCSCEEEECCCTTCCHHHHHHH--THHHHHHHTTCEEEEECCTTS--------G-------------------GGTTS--
T ss_pred CCCceEEEECCCCCccceeecc--hhHHHHHHCCCeEEEecCCCC--------C-------------------CCCCC--
Confidence 3567899999999999999832 0345554 3699999998711 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. ...+.. ... +. +.+..+++..+ ...+++|||+||.+|+.++.. .+..++++|
T Consensus 79 ~-------------~~~~~~---~~~--~~---~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~~~~v~~~v 132 (210)
T 1imj_A 79 A-------------APAPIG---ELA--PG---SFLAAVVDALELGPPVVISPSLSGMYSLPFLTA-----PGSQLPGFV 132 (210)
T ss_dssp C-------------CSSCTT---SCC--CT---HHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTS-----TTCCCSEEE
T ss_pred C-------------Ccchhh---hcc--hH---HHHHHHHHHhCCCCeEEEEECchHHHHHHHHHh-----CccccceEE
Confidence 0 000000 000 00 12222333322 345899999999999999873 355799999
Q ss_pred EecCCCCCcc-ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHH
Q 007311 528 LCSGFALHSA-EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSF 603 (608)
Q Consensus 528 lisG~~~~~~-~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~F 603 (608)
++++...... ......+++|+++++|+ +|. ++.+.++++ +.+.+ .+++.++ +||.+..+. ...+.|.+|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~p~l~i~g~---~D~-~~~~~~~~~-~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~f 205 (210)
T 1imj_A 133 PVAPICTDKINAANYASVKTPALIVYGD---QDP-MGQTSFEHL-KQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDF 205 (210)
T ss_dssp EESCSCGGGSCHHHHHTCCSCEEEEEET---TCH-HHHHHHHHH-TTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHH
T ss_pred EeCCCccccccchhhhhCCCCEEEEEcC---ccc-CCHHHHHHH-hhCCC--CCEEEecCCCcchhhcCHHHHHHHHHHH
Confidence 9998765432 23456789999999999 899 999999988 77665 5666665 599854322 357788888
Q ss_pred HHH
Q 007311 604 LQR 606 (608)
Q Consensus 604 l~~ 606 (608)
|++
T Consensus 206 l~~ 208 (210)
T 1imj_A 206 LQG 208 (210)
T ss_dssp HHT
T ss_pred HHh
Confidence 865
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-13 Score=135.44 Aligned_cols=167 Identities=17% Similarity=0.206 Sum_probs=114.0
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.|||+||++.+...|.. +.+.|. .+++++.+|.| ... . +..+.
T Consensus 24 ~pvvllHG~~~~~~~~~~----~~~~L~~~g~~vi~~D~~--------G~G------~-------S~~~~---------- 68 (279)
T 1hkh_A 24 QPVVLIHGYPLDGHSWER----QTRELLAQGYRVITYDRR--------GFG------G-------SSKVN---------- 68 (279)
T ss_dssp EEEEEECCTTCCGGGGHH----HHHHHHHTTEEEEEECCT--------TST------T-------SCCCS----------
T ss_pred CcEEEEcCCCchhhHHhh----hHHHHHhCCcEEEEeCCC--------CCC------C-------CCCCC----------
Confidence 359999999999999994 444554 36999999988 110 0 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCC-CccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEI-DFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~-~l~~vIli 529 (608)
...+++...+.+..+++..+ ....|+||||||++|+.+|.+. +. .++++|++
T Consensus 69 ---------------------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~~v~~lvl~ 122 (279)
T 1hkh_A 69 ---------------------TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARY-----GHERVAKLAFL 122 (279)
T ss_dssp ---------------------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHH-----CSTTEEEEEEE
T ss_pred ---------------------CCCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHc-----CccceeeEEEE
Confidence 01134555566666666654 4458999999999999999865 44 79999999
Q ss_pred cCCCCCcc-----------------------------------------------c------------------------
Q 007311 530 SGFALHSA-----------------------------------------------E------------------------ 538 (608)
Q Consensus 530 sG~~~~~~-----------------------------------------------~------------------------ 538 (608)
++..+... .
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (279)
T 1hkh_A 123 ASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVP 202 (279)
T ss_dssp SCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHH
T ss_pred ccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHH
Confidence 87543100 0
Q ss_pred -------cccCCC---CCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHH
Q 007311 539 -------FEHRSI---NCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFL 604 (608)
Q Consensus 539 -------~~~~~i---~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl 604 (608)
.....+ ++|+|+++|+ +|.++|.+.+ +++.+.+++ .++++.+ +||.++.+. .+.+.|.+||
T Consensus 203 ~~~~~~~~~l~~i~~~~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 277 (279)
T 1hkh_A 203 AWIEDFRSDVEAVRAAGKPTLILHGT---KDNILPIDATARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKTFL 277 (279)
T ss_dssp HHTCBCHHHHHHHHHHCCCEEEEEET---TCSSSCTTTTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred HHhhchhhhHHHhccCCCCEEEEEcC---CCccCChHHHHHHHHHhCCC--eeEEEeCCCCccchhcCHHHHHHHHHHHh
Confidence 001245 8999999999 8999998887 888888876 5555555 699875432 2566677777
Q ss_pred H
Q 007311 605 Q 605 (608)
Q Consensus 605 ~ 605 (608)
.
T Consensus 278 ~ 278 (279)
T 1hkh_A 278 A 278 (279)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=138.03 Aligned_cols=172 Identities=12% Similarity=0.078 Sum_probs=121.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++||++||++++...|. .+.+.|.+.++++.+|.|- .. . +..+..
T Consensus 28 ~~~vv~lHG~~~~~~~~~----~~~~~l~~~~~vi~~D~~G--------~G------~-------S~~~~~--------- 73 (297)
T 2qvb_A 28 GDAIVFQHGNPTSSYLWR----NIMPHLEGLGRLVACDLIG--------MG------A-------SDKLSP--------- 73 (297)
T ss_dssp SSEEEEECCTTCCGGGGT----TTGGGGTTSSEEEEECCTT--------ST------T-------SCCCSS---------
T ss_pred CCeEEEECCCCchHHHHH----HHHHHHhhcCeEEEEcCCC--------CC------C-------CCCCCC---------
Confidence 468999999999999998 6777777779999999871 10 0 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. + .....+++.++.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|++
T Consensus 74 ------------~-~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~ 130 (297)
T 2qvb_A 74 ------------S-G-----PDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQH-----RDRVQGIAFM 130 (297)
T ss_dssp ------------C-S-----TTSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHS-----GGGEEEEEEE
T ss_pred ------------c-c-----ccCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhC-----hHhhheeeEe
Confidence 0 0 001245566667777777654 4568999999999999999854 3468999999
Q ss_pred cCCCCCcc-----------------------------------------------------------c------------
Q 007311 530 SGFALHSA-----------------------------------------------------------E------------ 538 (608)
Q Consensus 530 sG~~~~~~-----------------------------------------------------------~------------ 538 (608)
++..+... .
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2qvb_A 131 EAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNL 210 (297)
T ss_dssp EECCSCBCGGGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHS
T ss_pred ccccCCccCCCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhc
Confidence 87653100 0
Q ss_pred -----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHH
Q 007311 539 -----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDE 599 (608)
Q Consensus 539 -----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~ 599 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ ..++. ++||.+..+. ...+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~-~~gH~~~~~~p~~~~~~ 284 (297)
T 2qvb_A 211 PIDGEPAEVVALVNEYRSWLEETDMPKLFINAE---PGAIITGRIRDYVRSWPNQ--TEITV-PGVHFVQEDSPEEIGAA 284 (297)
T ss_dssp CBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE---ECSSSCHHHHHHHHTSSSE--EEEEE-EESSCGGGTCHHHHHHH
T ss_pred cccCCchhhHHHHHHHHhhcccccccEEEEecC---CCCcCCHHHHHHHHHHcCC--eEEEe-cCccchhhhCHHHHHHH
Confidence 0012478999999999 8999999999999988876 33344 7899876653 36678
Q ss_pred HHHHHHH
Q 007311 600 IKSFLQR 606 (608)
Q Consensus 600 i~~Fl~~ 606 (608)
|.+||++
T Consensus 285 i~~fl~~ 291 (297)
T 2qvb_A 285 IAQFVRR 291 (297)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888875
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-13 Score=136.29 Aligned_cols=170 Identities=12% Similarity=0.073 Sum_probs=117.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++||||||++.+...|. .+.+.|. .+++++.+|.| ... .=+.+
T Consensus 4 ~~~vvllHG~~~~~~~w~----~~~~~L~~~g~rVia~Dl~--------G~G---------------------~S~~~-- 48 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSWY----KLKPLLEAAGHKVTALDLA--------ASG---------------------TDLRK-- 48 (273)
T ss_dssp CCEEEEECCTTCCGGGGT----THHHHHHHTTCEEEECCCT--------TST---------------------TCCCC--
T ss_pred CCeEEEECCCCCCcchHH----HHHHHHHhCCCEEEEecCC--------CCC---------------------CCccC--
Confidence 357999999999999999 4445553 46999999988 110 00000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ .....+++.++.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+
T Consensus 49 ----------------~----~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~-----P~~v~~lvl 103 (273)
T 1xkl_A 49 ----------------I----EELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKY-----PQKIYAAVF 103 (273)
T ss_dssp ----------------G----GGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred ----------------c----ccccCHHHHHHHHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhC-----hHhheEEEE
Confidence 0 001246677777888888764 4568999999999999999854 456788888
Q ss_pred ecCCCCCc-----------------------------------c------c-----------------------c-----
Q 007311 529 CSGFALHS-----------------------------------A------E-----------------------F----- 539 (608)
Q Consensus 529 isG~~~~~-----------------------------------~------~-----------------------~----- 539 (608)
+++..+.. . . .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1xkl_A 104 LAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFM 183 (273)
T ss_dssp ESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCH
T ss_pred EeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhh
Confidence 77532100 0 0 0
Q ss_pred ------c----cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 540 ------E----HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 540 ------~----~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
. ....++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. ++.+.|.+|+++
T Consensus 184 ~~~~~~~~~~~~~~~~~P~l~i~G~---~D~~~p~~~~~~~~~~~p~--~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~ 258 (273)
T 1xkl_A 184 EDLSKAKYFTDERFGSVKRVYIVCT---EDKGIPEEFQRWQIDNIGV--TEAIEIKGADHMAMLCEPQKLCASLLEIAHK 258 (273)
T ss_dssp HHHHHCCCCCTTTGGGSCEEEEEET---TCTTTTHHHHHHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred hhhhcccccchhhhCCCCeEEEEeC---CccCCCHHHHHHHHHhCCC--CeEEEeCCCCCCchhcCHHHHHHHHHHHHHH
Confidence 0 00146899999999 8999999999999998876 455555 6799976543 367788888865
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-12 Score=125.49 Aligned_cols=120 Identities=18% Similarity=0.155 Sum_probs=88.5
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcC
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~ 554 (608)
+++.+.++++.... .....+|+|||+||.+|+.++.+. .++++|++++......- .......|+|+++|+
T Consensus 95 ~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~-------~v~~~v~~~~~~~~~~~-~~~~~~~p~l~i~g~ 164 (220)
T 2fuk_A 95 DDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL-------EPQVLISIAPPAGRWDF-SDVQPPAQWLVIQGD 164 (220)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH-------CCSEEEEESCCBTTBCC-TTCCCCSSEEEEEET
T ss_pred HHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc-------cccEEEEecccccchhh-hhcccCCcEEEEECC
Confidence 44555555554432 223568999999999999999853 68999999988765431 122336899999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh-hHHHHHHHHHHhC
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP-YIDEIKSFLQRFL 608 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~-~~~~i~~Fl~~~L 608 (608)
+|.++|.+.++++.+.+... .+++++ ++||.+...++ ..+.+.+||.++|
T Consensus 165 ---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 165 ---ADEIVDPQAVYDWLETLEQQ-PTLVRMPDTSHFFHRKLIDLRGALQHGVRRWL 216 (220)
T ss_dssp ---TCSSSCHHHHHHHHTTCSSC-CEEEEETTCCTTCTTCHHHHHHHHHHHHGGGC
T ss_pred ---CCcccCHHHHHHHHHHhCcC-CcEEEeCCCCceehhhHHHHHHHHHHHHHHHh
Confidence 89999999999999988543 666666 45999877543 5788899998765
|
| >3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-14 Score=137.21 Aligned_cols=113 Identities=17% Similarity=0.229 Sum_probs=77.7
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhh-----
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQ----- 203 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~----- 203 (608)
.+.|+++|+.++|+++. ..+..++++|||||+ .||..|||+| +++.+...+.+-...+.+....
T Consensus 30 ~~~Is~~eL~~~l~~~~------~~~~~~~~~iIDVR~-~Ey~~GHIpG----AiniP~~~l~~~~~~l~~l~~~~~~~~ 98 (169)
T 3f4a_A 30 VKYLDPTELHRWMQEGH------TTTLREPFQVVDVRG-SDYMGGHIKD----GWHYAYSRLKQDPEYLRELKHRLLEKQ 98 (169)
T ss_dssp EEEECHHHHHHHHHHTS------CTTTCCCEEEEECCS-TTCTTCEETT----CEECCHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcEeCHHHHHHHHhcCC------ccCcCCCEEEEECCc-hHHccCcCCC----CEECCHHHhhcccccHHHHHHHHHhhc
Confidence 56899999999998630 001124699999999 9999999999 5555533322110002211110
Q ss_pred ---cCCCeEEEEcCCC-ccHHHHHHHHHhcC--CC--CCcEEEcCccHHHHHHhCCC
Q 007311 204 ---LQGKHVLMYCTGG-IRCEMASAYVRSKG--AG--FENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 204 ---~k~k~Iv~yCtgG-iR~~~a~~~L~~~~--~G--f~nV~~L~GGi~~w~~~~~~ 252 (608)
..+++||+||.+| .|+.+|+.+|++.. .| |.+||+|+|||.+|.++.++
T Consensus 99 ~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~ 155 (169)
T 3f4a_A 99 ADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGD 155 (169)
T ss_dssp HTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTT
T ss_pred ccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCC
Confidence 1247999999886 99999998876420 15 68999999999999998654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.1e-13 Score=130.40 Aligned_cols=169 Identities=15% Similarity=0.155 Sum_probs=116.0
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..++.||++||+| ++...|. ..+.+.|...+.++.+|.+.. + ...+
T Consensus 27 ~~~~~vv~~HG~~~~~~~~~~~~---~~~~~~l~~~~~v~~~d~~~~--------~------------------~~~~-- 75 (275)
T 3h04_A 27 PTKGVIVYIHGGGLMFGKANDLS---PQYIDILTEHYDLIQLSYRLL--------P------------------EVSL-- 75 (275)
T ss_dssp SCSEEEEEECCSTTTSCCTTCSC---HHHHHHHTTTEEEEEECCCCT--------T------------------TSCH--
T ss_pred CCCCEEEEEECCcccCCchhhhH---HHHHHHHHhCceEEeeccccC--------C------------------cccc--
Confidence 3567899999999 6666543 245556665599999987711 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....+++.+.++++.+.+ .....+|+||||||.+|+.+|.+ ..++++
T Consensus 76 ------------------------~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~-------~~v~~~ 122 (275)
T 3h04_A 76 ------------------------DCIIEDVYASFDAIQSQY--SNCPIFTFGRSSGAYLSLLIARD-------RDIDGV 122 (275)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHTT--TTSCEEEEEETHHHHHHHHHHHH-------SCCSEE
T ss_pred ------------------------chhHHHHHHHHHHHHhhC--CCCCEEEEEecHHHHHHHHHhcc-------CCccEE
Confidence 011233444444444432 12455899999999999999984 468999
Q ss_pred EEecCCCCCccc------------------------------------------------------c-------------
Q 007311 527 ILCSGFALHSAE------------------------------------------------------F------------- 539 (608)
Q Consensus 527 IlisG~~~~~~~------------------------------------------------------~------------- 539 (608)
|+++++...... .
T Consensus 123 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (275)
T 3h04_A 123 IDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIA 202 (275)
T ss_dssp EEESCCSCSCSHHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCC
T ss_pred EeccccccccccccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccc
Confidence 999987743100 0
Q ss_pred --ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC-----hhhHHHHHHHHHHhC
Q 007311 540 --EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR-----SPYIDEIKSFLQRFL 608 (608)
Q Consensus 540 --~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~-----~~~~~~i~~Fl~~~L 608 (608)
....++ |+|+++|+ +|.++|.+.++++.+.+.+ ..++.++ +||.+... .+.++.+.+||++.|
T Consensus 203 ~~~~~~~~-P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 203 PDELKTLP-PVFIAHCN---GDYDVPVEESEHIMNHVPH--STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp HHHHTTCC-CEEEEEET---TCSSSCTHHHHHHHTTCSS--EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cchhccCC-CEEEEecC---CCCCCChHHHHHHHHhcCC--ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHh
Confidence 014556 99999999 8999999999999998876 4566665 59987665 457889999998753
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.48 E-value=3.5e-13 Score=136.43 Aligned_cols=169 Identities=15% Similarity=0.202 Sum_probs=117.2
Q ss_pred cEEEEecCCCCChH---HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 373 LRILCLHGFRQNAS---SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 373 ~~iLlLHG~G~na~---~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+.||||||+|.+.. .|. .+...|..+++++.+|.| .+. . + .. +.
T Consensus 26 ~~vvllHG~~~~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G------~-------S-----~~---~~ 72 (282)
T 1iup_A 26 QPVILIHGSGPGVSAYANWR----LTIPALSKFYRVIAPDMV--------GFG------F-------T-----DR---PE 72 (282)
T ss_dssp SEEEEECCCCTTCCHHHHHT----TTHHHHTTTSEEEEECCT--------TST------T-------S-----CC---CT
T ss_pred CeEEEECCCCCCccHHHHHH----HHHHhhccCCEEEEECCC--------CCC------C-------C-----CC---CC
Confidence 46999999987665 666 444556668999999988 110 0 0 00 00
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ ....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+
T Consensus 73 ------------~----------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~-----P~~v~~lvl 125 (282)
T 1iup_A 73 ------------N----------YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRY-----SERVDRMVL 125 (282)
T ss_dssp ------------T----------CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHS-----GGGEEEEEE
T ss_pred ------------C----------CCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHC-----hHHHHHHHe
Confidence 0 01235566677777777765 4557999999999999999954 457899999
Q ss_pred ecCCCCCc---------------------------------c-c------------------------------------
Q 007311 529 CSGFALHS---------------------------------A-E------------------------------------ 538 (608)
Q Consensus 529 isG~~~~~---------------------------------~-~------------------------------------ 538 (608)
+++..... . +
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (282)
T 1iup_A 126 MGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASS 205 (282)
T ss_dssp ESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCC
T ss_pred eCCccCCCCCCHHHHHHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccc
Confidence 88643200 0 0
Q ss_pred -cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 -FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 -~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. ++.+.|.+||.+
T Consensus 206 ~~~l~~i~~P~lii~G~---~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 206 DEDIKTLPNETLIIHGR---EDQVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp HHHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred hhhhhhcCCCEEEEecC---CCCCCCHHHHHHHHHhCCC--CeEEEECCCCCCccccCHHHHHHHHHHHHhc
Confidence 0124678999999999 8999999999999999876 555555 5699865532 367788888864
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-13 Score=128.24 Aligned_cols=163 Identities=16% Similarity=0.124 Sum_probs=109.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCc---EEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIA---EFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~---~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+++|||+||++++...|. .+.+.|. .++ +++.+|.|-. . ...
T Consensus 3 ~~~vv~~HG~~~~~~~~~----~~~~~l~~~G~~~~~v~~~d~~g~--------g------------------~s~---- 48 (181)
T 1isp_A 3 HNPVVMVHGIGGASFNFA----GIKSYLVSQGWSRDKLYAVDFWDK--------T------------------GTN---- 48 (181)
T ss_dssp CCCEEEECCTTCCGGGGH----HHHHHHHHTTCCGGGEEECCCSCT--------T------------------CCH----
T ss_pred CCeEEEECCcCCCHhHHH----HHHHHHHHcCCCCccEEEEecCCC--------C------------------Cch----
Confidence 457999999999999999 5555554 233 6888887610 0 000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
...+++..+.+.++++..+ ....|+||||||.+|+.++.+.. .+..++++
T Consensus 49 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~---~~~~v~~~ 99 (181)
T 1isp_A 49 --------------------------YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD---GGNKVANV 99 (181)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSS---GGGTEEEE
T ss_pred --------------------------hhhHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcC---CCceEEEE
Confidence 1134455566666666654 44589999999999999998641 13579999
Q ss_pred EEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC-hhhHHHHH
Q 007311 527 ILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR-SPYIDEIK 601 (608)
Q Consensus 527 IlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~-~~~~~~i~ 601 (608)
|++++....... ......++|+|+++|+ +|.++|.+.++ +.+. ..++..++||..... ++..+.|.
T Consensus 100 v~~~~~~~~~~~~~~~~~~~~~~~p~l~i~G~---~D~~v~~~~~~-----~~~~-~~~~~~~~gH~~~~~~~~~~~~i~ 170 (181)
T 1isp_A 100 VTLGGANRLTTGKALPGTDPNQKILYTSIYSS---ADMIVMNYLSR-----LDGA-RNVQIHGVGHIGLLYSSQVNSLIK 170 (181)
T ss_dssp EEESCCGGGTCSBCCCCSCTTCCCEEEEEEET---TCSSSCHHHHC-----CBTS-EEEEESSCCTGGGGGCHHHHHHHH
T ss_pred EEEcCcccccccccCCCCCCccCCcEEEEecC---CCccccccccc-----CCCC-cceeeccCchHhhccCHHHHHHHH
Confidence 999987654321 1122457899999999 89999987542 4442 334444669985443 45778888
Q ss_pred HHHHH
Q 007311 602 SFLQR 606 (608)
Q Consensus 602 ~Fl~~ 606 (608)
+||.+
T Consensus 171 ~fl~~ 175 (181)
T 1isp_A 171 EGLNG 175 (181)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 88864
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.7e-13 Score=134.39 Aligned_cols=170 Identities=14% Similarity=0.143 Sum_probs=112.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++.+...|..++..|.+ .+++++.+|.| .+. . +..+.
T Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~l~~---~g~~vi~~D~~--------G~G------~-------S~~~~---------- 66 (275)
T 1a88_A 21 GLPVVFHHGWPLSADDWDNQMLFFLS---HGYRVIAHDRR--------GHG------R-------SDQPS---------- 66 (275)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHH---TTCEEEEECCT--------TST------T-------SCCCS----------
T ss_pred CceEEEECCCCCchhhHHHHHHHHHH---CCceEEEEcCC--------cCC------C-------CCCCC----------
Confidence 35799999999999999944444432 36999999988 110 0 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
...++++..+.+.++++..+ ....|+||||||++|+.++.+. .+..++++|+++
T Consensus 67 ---------------------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~p~~v~~lvl~~ 121 (275)
T 1a88_A 67 ---------------------TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARA----EPGRVAKAVLVS 121 (275)
T ss_dssp ---------------------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHS----CTTSEEEEEEES
T ss_pred ---------------------CCCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHh----CchheEEEEEec
Confidence 01235555666667776654 4458999999999999877743 256799999988
Q ss_pred CCCCCc---------------------------------------c---------c------------------------
Q 007311 531 GFALHS---------------------------------------A---------E------------------------ 538 (608)
Q Consensus 531 G~~~~~---------------------------------------~---------~------------------------ 538 (608)
+..+.. . +
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (275)
T 1a88_A 122 AVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAA 201 (275)
T ss_dssp CCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhh
Confidence 643210 0 0
Q ss_pred -------cccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+. .+.+.+.+++ .++++.+ +||.++.+. .+.+.|.+||.
T Consensus 202 ~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 202 FSETDFTDDLKRIDVPVLVAHGT---DDQVVPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCCHHHHHHCCSCEEEEEET---TCSSSCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred hhhcccccccccCCCCEEEEecC---CCccCCcHHHHHHHHhhCCC--cEEEEcCCCCccHHHhCHHHHHHHHHHHhh
Confidence 0113578999999999 899999874 4556666664 5665554 599875432 25677777775
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-13 Score=139.99 Aligned_cols=169 Identities=20% Similarity=0.218 Sum_probs=122.2
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+.||++||+|++...|. .+.+.|. .++.++.+|.+-. . ...+
T Consensus 95 ~~p~vv~~HG~~~~~~~~~----~~~~~la~~G~~vv~~d~~g~--------g------------------~s~~----- 139 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIA----WLGERIASHGFVVIAIDTNTT--------L------------------DQPD----- 139 (306)
T ss_dssp CEEEEEEECCTTCCHHHHH----HHHHHHHTTTEEEEEECCSST--------T------------------CCHH-----
T ss_pred CCCEEEEeCCCcCCHHHHH----HHHHHHHhCCCEEEEecCCCC--------C------------------CCcc-----
Confidence 5678999999999999998 5666665 3699999987710 0 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHH----HhH--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTI----FSQ--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~----i~~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
....++..++++|.+. +.. .....+|+||||||.+|+.++... ..+
T Consensus 140 ----------------------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~------p~v 191 (306)
T 3vis_A 140 ----------------------SRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQR------PDL 191 (306)
T ss_dssp ----------------------HHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHC------TTC
T ss_pred ----------------------hHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhC------CCe
Confidence 0123456666666654 111 123457999999999999999853 349
Q ss_pred cEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccC-CcEEEEeC-CCCcCCCC--hhhHH
Q 007311 524 RFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG-CSVIIEHD-CGHIIPTR--SPYID 598 (608)
Q Consensus 524 ~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~-~~~vv~~~-gGH~ip~~--~~~~~ 598 (608)
+++|+++++.... ....+++|+|+++|+ +|.++|.+ .++++++.+... ..++++++ +||.++.. ....+
T Consensus 192 ~~~v~~~~~~~~~---~~~~~~~P~lii~G~---~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~ 265 (306)
T 3vis_A 192 KAAIPLTPWHLNK---SWRDITVPTLIIGAE---YDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGM 265 (306)
T ss_dssp SEEEEESCCCSCC---CCTTCCSCEEEEEET---TCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHH
T ss_pred eEEEEeccccCcc---ccccCCCCEEEEecC---CCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHH
Confidence 9999999877642 356788999999999 89999998 599999998863 25555565 59987554 34778
Q ss_pred HHHHHHHHhC
Q 007311 599 EIKSFLQRFL 608 (608)
Q Consensus 599 ~i~~Fl~~~L 608 (608)
.+.+||+++|
T Consensus 266 ~i~~fl~~~l 275 (306)
T 3vis_A 266 YSVAWLKRFV 275 (306)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999998753
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.48 E-value=3.7e-13 Score=134.51 Aligned_cols=171 Identities=11% Similarity=0.067 Sum_probs=117.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++|||+||++.++..|. .+...|. .+++++.+|.| .+. . +..+ .
T Consensus 3 ~~~vvllHG~~~~~~~w~----~~~~~L~~~g~~via~Dl~--------G~G------~-------S~~~-----~---- 48 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWH----KLKPLLEALGHKVTALDLA--------ASG------V-------DPRQ-----I---- 48 (257)
T ss_dssp CCEEEEECCTTCCGGGGT----THHHHHHHTTCEEEEECCT--------TST------T-------CSCC-----G----
T ss_pred CCcEEEEcCCccCcCCHH----HHHHHHHhCCCEEEEeCCC--------CCC------C-------CCCC-----c----
Confidence 357999999999999999 4555553 36999999988 110 0 0000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
....+++...+.|.++++..+ ....|+||||||++|+.+|.+++ ..++++|+
T Consensus 49 ---------------------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p-----~~v~~lVl 102 (257)
T 3c6x_A 49 ---------------------EEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYC-----EKIAAAVF 102 (257)
T ss_dssp ---------------------GGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHG-----GGEEEEEE
T ss_pred ---------------------ccccCHHHHHHHHHHHHHhccccCCeEEEEECcchHHHHHHHHhCc-----hhhheEEE
Confidence 001246667777888887763 45689999999999999998764 45777777
Q ss_pred ecCCCCC-----c----------------------------------------------c-c----------c-------
Q 007311 529 CSGFALH-----S----------------------------------------------A-E----------F------- 539 (608)
Q Consensus 529 isG~~~~-----~----------------------------------------------~-~----------~------- 539 (608)
+++..+. . . . .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (257)
T 3c6x_A 103 HNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNI 182 (257)
T ss_dssp EEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHH
T ss_pred EecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhh
Confidence 6643110 0 0 0 0
Q ss_pred -----c---cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHHh
Q 007311 540 -----E---HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 540 -----~---~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~~ 607 (608)
. ....++|+|+|+|+ +|+++|.+.++++++.+++ .++++. ++||.++.+.+ +.+.|.+|++++
T Consensus 183 ~~~~~~~~~~~~~~~P~l~i~G~---~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 183 LAKRPFFTKEGYGSIKKIYVWTD---QDEIFLPEFQLWQIENYKP--DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSCCCCTTTGGGSCEEEEECT---TCSSSCHHHHHHHHHHSCC--SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred hccccccChhhcCcccEEEEEeC---CCcccCHHHHHHHHHHCCC--CeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 0 00136899999999 8999999999999999876 566555 67999766433 567888888754
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-13 Score=140.01 Aligned_cols=172 Identities=12% Similarity=0.076 Sum_probs=117.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++||||||++++...|..++..|.+ .++++|.+|.| .+. ....-.
T Consensus 46 g~~vvllHG~~~~~~~w~~~~~~L~~---~g~rvia~Dl~--------G~G------------------~S~~~~----- 91 (297)
T 2xt0_A 46 EHTFLCLHGEPSWSFLYRKMLPVFTA---AGGRVVAPDLF--------GFG------------------RSDKPT----- 91 (297)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHH---TTCEEEEECCT--------TST------------------TSCEES-----
T ss_pred CCeEEEECCCCCcceeHHHHHHHHHh---CCcEEEEeCCC--------CCC------------------CCCCCC-----
Confidence 46799999999999999955544443 25999999988 111 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ .....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+++
T Consensus 92 --------------~-----~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~-----P~~v~~lvl~~ 147 (297)
T 2xt0_A 92 --------------D-----DAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDR-----PQLVDRLIVMN 147 (297)
T ss_dssp --------------C-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHC-----TTSEEEEEEES
T ss_pred --------------C-----cccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhC-----hHHhcEEEEEC
Confidence 0 001245666777777777765 4558999999999999999954 56799999987
Q ss_pred CCCC---C-c--------------------------c---------------c---------------------------
Q 007311 531 GFAL---H-S--------------------------A---------------E--------------------------- 538 (608)
Q Consensus 531 G~~~---~-~--------------------------~---------------~--------------------------- 538 (608)
+... . . . .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (297)
T 2xt0_A 148 TALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGR 227 (297)
T ss_dssp CCCCSSSCSCHHHHHHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHH
T ss_pred CCCCcccCCchhHHHHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHH
Confidence 6320 0 0 0 0
Q ss_pred ---cccC-CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE-EeCCCCcCCCCh-hhHHHHHHHHH
Q 007311 539 ---FEHR-SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII-EHDCGHIIPTRS-PYIDEIKSFLQ 605 (608)
Q Consensus 539 ---~~~~-~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv-~~~gGH~ip~~~-~~~~~i~~Fl~ 605 (608)
.... .+++|+|+|+|+ +|.++| +.++++.+.+++....++ ..++||.++..+ ++.+.|.+||.
T Consensus 228 ~~~~~l~~~i~~P~Lvi~G~---~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~~~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 228 QAMSFWSTQWSGPTFMAVGA---QDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHHTCCSCEEEEEET---TCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGGGGCHHHHHHHHHHTT
T ss_pred HHHHHhhhccCCCeEEEEeC---CCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCcccCHHHHHHHHHHHHh
Confidence 0012 789999999999 899999 888999999887534433 457899976521 25677777764
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=139.25 Aligned_cols=178 Identities=14% Similarity=0.131 Sum_probs=114.5
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||++++...|. .+.+.|.. ++.++.+|.|- . .+-..+
T Consensus 27 ~~p~vv~~HG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G--------~---------------------g~s~~~- 72 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSL----VRAREAVGLGCICMTFDLRG--------H---------------------EGYASM- 72 (290)
T ss_dssp SEEEEEEECCTTCCTTTTH----HHHHHHHTTTCEEECCCCTT--------S---------------------GGGGGG-
T ss_pred CCcEEEEeCCCCCCcCcHH----HHHHHHHHCCCEEEEeecCC--------C---------------------CCCCCC-
Confidence 5688999999999999998 56666654 78999998771 0 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+....+++.+.+++|.+.-.......+|+|||+||.+|+.++.+ .++++++++
T Consensus 73 ---------------~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~-------~~~~~~~l~ 130 (290)
T 3ksr_A 73 ---------------RQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRE-------RPVEWLALR 130 (290)
T ss_dssp ---------------TTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTT-------SCCSEEEEE
T ss_pred ---------------cccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHh-------CCCCEEEEe
Confidence 0000000111223333332221100011245799999999999999873 348889998
Q ss_pred cCCCCCccc------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC-
Q 007311 530 SGFALHSAE------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC- 578 (608)
Q Consensus 530 sG~~~~~~~------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~- 578 (608)
++....... .....+++|+|+++|+ +|.+++.+.++++.+.++...
T Consensus 131 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~v~~~~~~~~~~~~~~~~~ 207 (290)
T 3ksr_A 131 SPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAE---NDVIVPHPVMRNYADAFTNARS 207 (290)
T ss_dssp SCCCCCSSCTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEET---TCSSSCHHHHHHHHHHTTTSSE
T ss_pred CcchhhhhhhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEec---CCcccChHHHHHHHHHhccCCC
Confidence 866532110 1234678999999999 899999999999999987642
Q ss_pred cEEEEeC-CCCcCCCC---hhhHHHHHHHHHHh
Q 007311 579 SVIIEHD-CGHIIPTR---SPYIDEIKSFLQRF 607 (608)
Q Consensus 579 ~~vv~~~-gGH~ip~~---~~~~~~i~~Fl~~~ 607 (608)
.+++.++ +||.+... ....+.+.+||.+.
T Consensus 208 ~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 208 LTSRVIAGADHALSVKEHQQEYTRALIDWLTEM 240 (290)
T ss_dssp EEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 4566665 59987553 23567888898764
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.1e-13 Score=131.88 Aligned_cols=189 Identities=12% Similarity=0.102 Sum_probs=116.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|.||++||++++...|. .+++.|. .++.++.+|.+..-. . + ........|+.
T Consensus 30 ~~~p~vv~~HG~~g~~~~~~----~~~~~l~~~G~~v~~~d~~g~g~------~----------~--~~~~~~~~~~~-- 85 (241)
T 3f67_A 30 GPLPIVIVVQEIFGVHEHIR----DLCRRLAQEGYLAIAPELYFRQG------D----------P--NEYHDIPTLFK-- 85 (241)
T ss_dssp SCEEEEEEECCTTCSCHHHH----HHHHHHHHTTCEEEEECTTTTTC------C----------G--GGCCSHHHHHH--
T ss_pred CCCCEEEEEcCcCccCHHHH----HHHHHHHHCCcEEEEecccccCC------C----------C--CchhhHHHHHH--
Confidence 34689999999999998888 5555553 579999999872100 0 0 00000011100
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.|.. ........+++.+++++|.+.- ......+|+||||||.+|+.++.+. +.++++|+
T Consensus 86 --------~~~~------~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~------~~~~~~v~ 144 (241)
T 3f67_A 86 --------ELVS------KVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHN------PQLKAAVA 144 (241)
T ss_dssp --------HTGG------GSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTC------TTCCEEEE
T ss_pred --------Hhhh------cCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhC------cCcceEEE
Confidence 0000 0000111233333333332221 0123457999999999999998742 34788888
Q ss_pred ecCCCCCcc--------ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeC-CCCcCCCC----
Q 007311 529 CSGFALHSA--------EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHD-CGHIIPTR---- 593 (608)
Q Consensus 529 isG~~~~~~--------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~-gGH~ip~~---- 593 (608)
+.|...... ......+++|+|+++|+ +|.++|.+.++++.+.+.. ...+++.++ +||.+...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~---~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 221 (241)
T 3f67_A 145 WYGKLVGEKSLNSPKHPVDIAVDLNAPVLGLYGA---KDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRAS 221 (241)
T ss_dssp ESCCCSCCCCSSSCCCHHHHGGGCCSCEEEEEET---TCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTT
T ss_pred EeccccCCCccCCccCHHHhhhhcCCCEEEEEec---CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCC
Confidence 877654322 12356788999999999 8999999999999998863 236777776 59987532
Q ss_pred ------hhhHHHHHHHHHH
Q 007311 594 ------SPYIDEIKSFLQR 606 (608)
Q Consensus 594 ------~~~~~~i~~Fl~~ 606 (608)
....+.+.+||++
T Consensus 222 ~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 222 YHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 2356777888764
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=137.43 Aligned_cols=172 Identities=13% Similarity=0.069 Sum_probs=120.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||++++...|. .+.+.|...++++.+|.|- .. . +..+..
T Consensus 29 ~~~vv~lHG~~~~~~~~~----~~~~~L~~~~~vi~~D~~G--------~G------~-------S~~~~~--------- 74 (302)
T 1mj5_A 29 GDPILFQHGNPTSSYLWR----NIMPHCAGLGRLIACDLIG--------MG------D-------SDKLDP--------- 74 (302)
T ss_dssp SSEEEEECCTTCCGGGGT----TTGGGGTTSSEEEEECCTT--------ST------T-------SCCCSS---------
T ss_pred CCEEEEECCCCCchhhhH----HHHHHhccCCeEEEEcCCC--------CC------C-------CCCCCC---------
Confidence 468999999999999998 6677777778999999871 00 0 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. + .....+++.++.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|++
T Consensus 75 ------------~-~-----~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~ 131 (302)
T 1mj5_A 75 ------------S-G-----PERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRH-----RERVQGIAYM 131 (302)
T ss_dssp ------------C-S-----TTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHT-----GGGEEEEEEE
T ss_pred ------------C-C-----cccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHC-----HHHHhheeee
Confidence 0 0 001245566666777776654 4568999999999999999854 3468999999
Q ss_pred cCCCCCcc-----------------------------------------------------------c------------
Q 007311 530 SGFALHSA-----------------------------------------------------------E------------ 538 (608)
Q Consensus 530 sG~~~~~~-----------------------------------------------------------~------------ 538 (608)
++..+... .
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (302)
T 1mj5_A 132 EAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQI 211 (302)
T ss_dssp EECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGS
T ss_pred cccCCchhhhhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhc
Confidence 87653100 0
Q ss_pred -----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHH
Q 007311 539 -----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDE 599 (608)
Q Consensus 539 -----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~ 599 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ ..++. ++||.+..+. ...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~-~~gH~~~~e~p~~~~~~ 285 (302)
T 1mj5_A 212 PIAGTPADVVAIARDYAGWLSESPIPKLFINAE---PGALTTGRMRDFCRTWPNQ--TEITV-AGAHFIQEDSPDEIGAA 285 (302)
T ss_dssp CBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEE---ECSSSSHHHHHHHTTCSSE--EEEEE-EESSCGGGTCHHHHHHH
T ss_pred cccccchhhHHHHHHHHhhhhccCCCeEEEEeC---CCCCCChHHHHHHHHhcCC--ceEEe-cCcCcccccCHHHHHHH
Confidence 0013578999999999 8999999999999888876 33344 7899976543 36777
Q ss_pred HHHHHHH
Q 007311 600 IKSFLQR 606 (608)
Q Consensus 600 i~~Fl~~ 606 (608)
|.+|+.+
T Consensus 286 i~~fl~~ 292 (302)
T 1mj5_A 286 IAAFVRR 292 (302)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888865
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-13 Score=135.74 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=112.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++.+...|..++..|.+ .+++++.+|.| .+. . + .. .
T Consensus 22 ~~~vvllHG~~~~~~~w~~~~~~L~~---~g~~vi~~D~~--------G~G------~-------S-----~~-~----- 66 (276)
T 1zoi_A 22 APVIHFHHGWPLSADDWDAQLLFFLA---HGYRVVAHDRR--------GHG------R-------S-----SQ-V----- 66 (276)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHH---TTCEEEEECCT--------TST------T-------S-----CC-C-----
T ss_pred CCeEEEECCCCcchhHHHHHHHHHHh---CCCEEEEecCC--------CCC------C-------C-----CC-C-----
Confidence 35799999999999999944444432 35999999988 110 0 0 00 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++...+.+.++++..+ ....|+||||||.+|+.++.++ .+..++++|+++
T Consensus 67 --------------------~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~p~~v~~lvl~~ 122 (276)
T 1zoi_A 67 --------------------WDGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARH----PEDKVAKAVLIA 122 (276)
T ss_dssp --------------------SSCCSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHC----TTSCCCCEEEES
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHh----CHHheeeeEEec
Confidence 001235555666667776654 3458999999999999987743 146789999988
Q ss_pred CCCCCc---------------------------------------c----------c-----------------------
Q 007311 531 GFALHS---------------------------------------A----------E----------------------- 538 (608)
Q Consensus 531 G~~~~~---------------------------------------~----------~----------------------- 538 (608)
+..+.. . .
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (276)
T 1zoi_A 123 AVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVA 202 (276)
T ss_dssp CCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCCccccccccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 643210 0 0
Q ss_pred -------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+ ..+.+.+.+++ .++++. ++||.++.+. ++.+.|.+||.
T Consensus 203 ~~~~~~~~~l~~i~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 203 FSQTDFTEDLKGIQQPVLVMHGD---DDQIVPYENSGVLSAKLLPN--GALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp HHSCCCHHHHHHCCSCEEEEEET---TCSSSCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred hcccchhhhccccCCCEEEEEcC---CCcccChHHHHHHHHhhCCC--ceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 0113578999999999 89999987 45566677765 555555 5699875432 35677777774
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.1e-13 Score=137.76 Aligned_cols=170 Identities=14% Similarity=0.113 Sum_probs=115.5
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++||++||++++...|...+..|. ++++++.+|.|- .. + .... .
T Consensus 66 ~~~~vv~lHG~~~~~~~~~~~~~~L~----~g~~vi~~D~~G--------~g-----G------------~s~~-~---- 111 (306)
T 2r11_A 66 DAPPLVLLHGALFSSTMWYPNIADWS----SKYRTYAVDIIG--------DK-----N------------KSIP-E---- 111 (306)
T ss_dssp TSCEEEEECCTTTCGGGGTTTHHHHH----HHSEEEEECCTT--------SS-----S------------SCEE-C----
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEecCCC--------CC-----C------------CCCC-C----
Confidence 35689999999999999995554444 469999999881 00 0 0000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+.+..+.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|++
T Consensus 112 ---------------------~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~ 165 (306)
T 2r11_A 112 ---------------------NVSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRM-----PERVKSAAIL 165 (306)
T ss_dssp ---------------------SCCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEE
T ss_pred ---------------------CCCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhC-----ccceeeEEEE
Confidence 001234556666777777654 4558999999999999999854 3469999999
Q ss_pred cCCCCCccc-----------------------------------------------------------------cccCCC
Q 007311 530 SGFALHSAE-----------------------------------------------------------------FEHRSI 544 (608)
Q Consensus 530 sG~~~~~~~-----------------------------------------------------------------~~~~~i 544 (608)
++....... .....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 245 (306)
T 2r11_A 166 SPAETFLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSA 245 (306)
T ss_dssp SCSSBTSCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTC
T ss_pred cCccccCcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcC
Confidence 986542100 012357
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHH-HhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAK-AFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~-~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
++|+|+++|+ +|.++|.+.+.++.+ .+++ .++++.+ +||.+..+. ...+.|.+||+
T Consensus 246 ~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 246 RVPILLLLGE---HEVIYDPHSALHRASSFVPD--IEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp CSCEEEEEET---TCCSSCHHHHHHHHHHHSTT--CEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred CCCEEEEEeC---CCcccCHHHHHHHHHHHCCC--CEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 8999999999 899999988885554 5554 5666665 699865432 25566777764
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.5e-13 Score=138.98 Aligned_cols=167 Identities=18% Similarity=0.214 Sum_probs=117.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++||++||+++++..|. .+...| +++++.+|.|- .. ...+..
T Consensus 81 ~~~vv~~hG~~~~~~~~~----~~~~~l--g~~Vi~~D~~G--------~G------------------~S~~~~----- 123 (330)
T 3p2m_A 81 APRVIFLHGGGQNAHTWD----TVIVGL--GEPALAVDLPG--------HG------------------HSAWRE----- 123 (330)
T ss_dssp CCSEEEECCTTCCGGGGH----HHHHHS--CCCEEEECCTT--------ST------------------TSCCCS-----
T ss_pred CCeEEEECCCCCccchHH----HHHHHc--CCeEEEEcCCC--------CC------------------CCCCCC-----
Confidence 467999999999999999 666666 68999999871 00 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....+++.++.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 124 --------------------~~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~ 178 (330)
T 3p2m_A 124 --------------------DGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMA-----PDLVGELVLVD 178 (330)
T ss_dssp --------------------SCBCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHC-----TTTCSEEEEES
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhC-----hhhcceEEEEc
Confidence 001235566667777777654 3458999999999999999854 56799999998
Q ss_pred CCCCCcc--------------------------c----------------------------------------------
Q 007311 531 GFALHSA--------------------------E---------------------------------------------- 538 (608)
Q Consensus 531 G~~~~~~--------------------------~---------------------------------------------- 538 (608)
+...... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (330)
T 3p2m_A 179 VTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDF 258 (330)
T ss_dssp CCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCH
T ss_pred CCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCcccc
Confidence 6532000 0
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcE-EEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSV-IIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~-vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .. +++.+ +||.++.+. ...+.|.+||+
T Consensus 259 ~~~~~~l~~i~~PvLii~G~---~D~~v~~~~~~~l~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 328 (330)
T 3p2m_A 259 AGLWDDVDALSAPITLVRGG---SSGFVTDQDTAELHRRATH--FRGVHIVEKSGHSVQSDQPRALIEIVRGVLD 328 (330)
T ss_dssp HHHHHHHHHCCSCEEEEEET---TCCSSCHHHHHHHHHHCSS--EEEEEEETTCCSCHHHHCHHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CeeEEEeCCCCCCcchhCHHHHHHHHHHHHh
Confidence 0124679999999999 8999999999999999876 44 55555 699975532 24556666664
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.46 E-value=8.6e-14 Score=137.55 Aligned_cols=172 Identities=13% Similarity=0.147 Sum_probs=115.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHH-ccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKK-LKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~-L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++|||+||+|++...|. .+.+. +..+++++.+|.|- .. ...+.
T Consensus 23 ~~~~vv~lHG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G--------~G------------------~s~~~---- 68 (279)
T 4g9e_A 23 EGAPLLMIHGNSSSGAIFA----PQLEGEIGKKWRVIAPDLPG--------HG------------------KSTDA---- 68 (279)
T ss_dssp CEEEEEEECCTTCCGGGGH----HHHHSHHHHHEEEEEECCTT--------ST------------------TSCCC----
T ss_pred CCCeEEEECCCCCchhHHH----HHHhHHHhcCCeEEeecCCC--------CC------------------CCCCC----
Confidence 4568999999999999999 44444 34579999999871 10 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.+ ......+.+..+.+.++++..+ ....|+|||+||.+|+.+|.+. +. +.++|+
T Consensus 69 ---------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~-~~~~vl 123 (279)
T 4g9e_A 69 ---------------ID----PDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARY-----PE-MRGLMI 123 (279)
T ss_dssp ---------------SC----HHHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTC-----TT-CCEEEE
T ss_pred ---------------CC----cccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhC-----Cc-ceeEEE
Confidence 00 0012245566666777776654 4458999999999999999843 33 778888
Q ss_pred ecCCCCCccc--------------------------------------------------------------------cc
Q 007311 529 CSGFALHSAE--------------------------------------------------------------------FE 540 (608)
Q Consensus 529 isG~~~~~~~--------------------------------------------------------------------~~ 540 (608)
+++....... ..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (279)
T 4g9e_A 124 TGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDI 203 (279)
T ss_dssp ESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHH
T ss_pred ecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHH
Confidence 8765432210 00
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHH-HHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELA-KAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~-~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
...+++|+|+++|+ +|.++|.+.+++++ +.+++ .+++.. ++||.+..+. .+.+.|.+||++
T Consensus 204 ~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (279)
T 4g9e_A 204 VAEAQLPIAVVNGR---DEPFVELDFVSKVKFGNLWE--GKTHVIDNAGHAPFREAPAEFDAYLARFIRD 268 (279)
T ss_dssp HHHCCSCEEEEEET---TCSSBCHHHHTTCCCSSBGG--GSCEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcC---CCcccchHHHHHHhhccCCC--CeEEEECCCCcchHHhCHHHHHHHHHHHHHH
Confidence 24579999999999 89999999888877 55554 444445 4699865432 366788888865
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-12 Score=129.52 Aligned_cols=171 Identities=16% Similarity=0.076 Sum_probs=115.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++|||+||++.+...|. .+.+.|.+.++++.+|.| ... . +..+
T Consensus 20 ~~~~vv~lHG~~~~~~~~~----~~~~~L~~~~~v~~~D~~--------G~G------~-------S~~~---------- 64 (264)
T 3ibt_A 20 HAPTLFLLSGWCQDHRLFK----NLAPLLARDFHVICPDWR--------GHD------A-------KQTD---------- 64 (264)
T ss_dssp SSCEEEEECCTTCCGGGGT----THHHHHTTTSEEEEECCT--------TCS------T-------TCCC----------
T ss_pred CCCeEEEEcCCCCcHhHHH----HHHHHHHhcCcEEEEccc--------cCC------C-------CCCC----------
Confidence 3568999999999999999 677777777999999988 110 0 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+++..+.+.++++..+ ....|+|||+||.+|+.+|.+. ++..++++|++
T Consensus 65 ---------------------~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~p~~v~~lvl~ 119 (264)
T 3ibt_A 65 ---------------------SGDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQL----GAARLPKTIII 119 (264)
T ss_dssp ---------------------CSCCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHS----CTTTSCEEEEE
T ss_pred ---------------------ccccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhh----ChhhhheEEEe
Confidence 001245666677777777654 4568999999999999999853 04679999999
Q ss_pred cCCCCCccc--------------------------------------------------------------------ccc
Q 007311 530 SGFALHSAE--------------------------------------------------------------------FEH 541 (608)
Q Consensus 530 sG~~~~~~~--------------------------------------------------------------------~~~ 541 (608)
++....... ...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (264)
T 3ibt_A 120 DWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRM 199 (264)
T ss_dssp SCCSSCCHHHHHHHHHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHH
T ss_pred cCCCCcChhhcchhhcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcc
Confidence 875511100 012
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl 604 (608)
..+++|+|++||.. +.|..++.+..+++++.+++ .++++.+ +||.+..+.+ +.+.|.+||
T Consensus 200 ~~i~~P~lii~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 262 (264)
T 3ibt_A 200 DSLPQKPEICHIYS-QPLSQDYRQLQLEFAAGHSW--FHPRHIPGRTHFPSLENPVAVAQAIREFL 262 (264)
T ss_dssp HTCSSCCEEEEEEC-CSCCHHHHHHHHHHHHHCTT--EEEEECCCSSSCHHHHCHHHHHHHHHHHT
T ss_pred cccCCCeEEEEecC-CccchhhHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHHH
Confidence 46799999997641 14555556778888888876 5666665 5998755322 445555554
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.46 E-value=3.8e-13 Score=137.00 Aligned_cols=170 Identities=16% Similarity=0.169 Sum_probs=118.6
Q ss_pred ccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 372 KLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 372 ~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.||||||+| .+...|. .+...|.+.++++.+|.| ... ... .
T Consensus 36 g~~vvllHG~~~~~~~~~~~~----~~~~~L~~~~~vi~~Dl~--------G~G------------------~S~--~-- 81 (296)
T 1j1i_A 36 GQPVILIHGGGAGAESEGNWR----NVIPILARHYRVIAMDML--------GFG------------------KTA--K-- 81 (296)
T ss_dssp SSEEEEECCCSTTCCHHHHHT----TTHHHHTTTSEEEEECCT--------TST------------------TSC--C--
T ss_pred CCeEEEECCCCCCcchHHHHH----HHHHHHhhcCEEEEECCC--------CCC------------------CCC--C--
Confidence 35799999999 7888888 555666666999999988 110 000 0
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
. .....++..++.+.++++..+ ....|+||||||.+|+.+|.+. +..++++
T Consensus 82 ~----------------------~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~-----p~~v~~l 134 (296)
T 1j1i_A 82 P----------------------DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLH-----SELVNAL 134 (296)
T ss_dssp C----------------------SSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHC-----GGGEEEE
T ss_pred C----------------------CCCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhC-----hHhhhEE
Confidence 0 001134556666777777654 3457999999999999999854 4568889
Q ss_pred EEecCCCCCc----------------------------------cc----------------------------------
Q 007311 527 ILCSGFALHS----------------------------------AE---------------------------------- 538 (608)
Q Consensus 527 IlisG~~~~~----------------------------------~~---------------------------------- 538 (608)
|++++..... ..
T Consensus 135 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (296)
T 1j1i_A 135 VLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYD 214 (296)
T ss_dssp EEESCCBCCCC----------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCC
T ss_pred EEECCCCCCCCCCchHHHHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhccccccc
Confidence 9887643110 00
Q ss_pred -cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHh
Q 007311 539 -FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 539 -~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.+..+. ++.+.|.+||.+.
T Consensus 215 ~~~l~~i~~P~Lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 282 (296)
T 1j1i_A 215 PEFIRKVQVPTLVVQGK---DDKVVPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSLR 282 (296)
T ss_dssp HHHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHhhcCCCCEEEEEEC---CCcccCHHHHHHHHHHCCC--CEEEEECCCCCCchhcCHHHHHHHHHHHHhcc
Confidence 0124688999999999 8999999999999999876 555554 5799865432 3677888888764
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-12 Score=132.47 Aligned_cols=172 Identities=15% Similarity=0.154 Sum_probs=117.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+.||||||++.+...|..+ +++.|.. +++++.+|.| .+. . +. ... +.
T Consensus 23 ~~~vvllHG~~~~~~~w~~~---~~~~L~~~G~~vi~~D~r--------G~G------~-------S~-----~~~-~~- 71 (298)
T 1q0r_A 23 DPALLLVMGGNLSALGWPDE---FARRLADGGLHVIRYDHR--------DTG------R-------ST-----TRD-FA- 71 (298)
T ss_dssp SCEEEEECCTTCCGGGSCHH---HHHHHHTTTCEEEEECCT--------TST------T-------SC-----CCC-TT-
T ss_pred CCeEEEEcCCCCCccchHHH---HHHHHHhCCCEEEeeCCC--------CCC------C-------CC-----CCC-CC-
Confidence 35799999999999999733 3345544 4999999988 110 0 00 000 00
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....++...+.+.++++..+ ....|+||||||.+|+.+|.++ +..++++|++
T Consensus 72 ---------------------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~ 125 (298)
T 1q0r_A 72 ---------------------AHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDH-----HDRLSSLTML 125 (298)
T ss_dssp ---------------------TSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEE
T ss_pred ---------------------cCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhC-----chhhheeEEe
Confidence 001235566667777777665 4558999999999999999865 3457777776
Q ss_pred cCCC-C---------------------C---------------------------------------cc-----------
Q 007311 530 SGFA-L---------------------H---------------------------------------SA----------- 537 (608)
Q Consensus 530 sG~~-~---------------------~---------------------------------------~~----------- 537 (608)
++.. . . ..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (298)
T 1q0r_A 126 LGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERA 205 (298)
T ss_dssp SCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHH
T ss_pred cccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHH
Confidence 5432 0 0 00
Q ss_pred -----------------------ccc-cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCC
Q 007311 538 -----------------------EFE-HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPT 592 (608)
Q Consensus 538 -----------------------~~~-~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~ 592 (608)
... ...+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||..|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gHe~p~ 280 (298)
T 1q0r_A 206 IDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAE---HDPIAPAPHGKHLAGLIPT--ARLAEIPGMGHALPS 280 (298)
T ss_dssp HHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEET---TCSSSCTTHHHHHHHTSTT--EEEEEETTCCSSCCG
T ss_pred hhccCCccchhhhhhhhhcCcccccccccccCCCEEEEEeC---CCccCCHHHHHHHHHhCCC--CEEEEcCCCCCCCcH
Confidence 001 34568999999999 8999999999999998876 555555 46996653
Q ss_pred ChhhHHHHHHHHHHh
Q 007311 593 RSPYIDEIKSFLQRF 607 (608)
Q Consensus 593 ~~~~~~~i~~Fl~~~ 607 (608)
++.+.|.+||.+.
T Consensus 281 --~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 281 --SVHGPLAEVILAH 293 (298)
T ss_dssp --GGHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH
Confidence 7899999999764
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-12 Score=132.46 Aligned_cols=171 Identities=18% Similarity=0.184 Sum_probs=113.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++||||||++++...|. .+...|.+.+++|.+|.| +.. . +..+
T Consensus 29 g~~lvllHG~~~~~~~w~----~~~~~L~~~~~via~Dl~--------G~G------~-------S~~~----------- 72 (294)
T 1ehy_A 29 GPTLLLLHGWPGFWWEWS----KVIGPLAEHYDVIVPDLR--------GFG------D-------SEKP----------- 72 (294)
T ss_dssp SSEEEEECCSSCCGGGGH----HHHHHHHTTSEEEEECCT--------TST------T-------SCCC-----------
T ss_pred CCEEEEECCCCcchhhHH----HHHHHHhhcCEEEecCCC--------CCC------C-------CCCC-----------
Confidence 357999999999999999 555555556999999988 110 0 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+.. ......++...+.|.++++..+ ....|+||||||.+|+.+|.++ +..++++|+++
T Consensus 73 --------------~~~--~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~-----P~~v~~lvl~~ 131 (294)
T 1ehy_A 73 --------------DLN--DLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKY-----SDRVIKAAIFD 131 (294)
T ss_dssp --------------CTT--CGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHT-----GGGEEEEEEEC
T ss_pred --------------ccc--cccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhC-----hhheeEEEEec
Confidence 000 0001246667777888888765 4558999999999999999965 45688888887
Q ss_pred CCCCC--------------------------------c---c------------------c------------c------
Q 007311 531 GFALH--------------------------------S---A------------------E------------F------ 539 (608)
Q Consensus 531 G~~~~--------------------------------~---~------------------~------------~------ 539 (608)
+..+. . . + .
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (294)
T 1ehy_A 132 PIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGG 211 (294)
T ss_dssp CSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHH
T ss_pred CCCCCcchhhccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchH
Confidence 52110 0 0 0 0
Q ss_pred -------------cc-C----CCCCCEEEEEcCCCCCCcccch-HHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hH
Q 007311 540 -------------EH-R----SINCPSLHIFGGDLGNDRQVAN-QASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YI 597 (608)
Q Consensus 540 -------------~~-~----~i~~PvL~i~G~~~~~D~~Vp~-~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~ 597 (608)
.. . .+++|+|+|+|+ +|..+|. +.++.+++.+++ .++++. ++||.++.+.+ +.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~ 286 (294)
T 1ehy_A 212 FNYYRANIRPDAALWTDLDHTMSDLPVTMIWGL---GDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAI 286 (294)
T ss_dssp HHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEEC---CSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHH
T ss_pred HHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeC---CCCCcchHHHHHHHHHHcCC--CceEEeCCCCCChhhhCHHHHH
Confidence 00 1 688999999999 8999883 677888888775 555555 57999765322 34
Q ss_pred HHHHHHH
Q 007311 598 DEIKSFL 604 (608)
Q Consensus 598 ~~i~~Fl 604 (608)
+.|.+||
T Consensus 287 ~~i~~fl 293 (294)
T 1ehy_A 287 DRIKTAF 293 (294)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 4444443
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.45 E-value=9.1e-13 Score=134.14 Aligned_cols=168 Identities=18% Similarity=0.189 Sum_probs=115.9
Q ss_pred cEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 373 LRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 373 ~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+.||||||+| .+...|. .+.+.|.+.++++.+|.| .+. . ..+-.
T Consensus 37 ~~vvllHG~~pg~~~~~~w~----~~~~~L~~~~~via~Dl~--------G~G------~------------S~~~~--- 83 (291)
T 2wue_A 37 QTVVLLHGGGPGAASWTNFS----RNIAVLARHFHVLAVDQP--------GYG------H------------SDKRA--- 83 (291)
T ss_dssp SEEEEECCCCTTCCHHHHTT----TTHHHHTTTSEEEEECCT--------TST------T------------SCCCS---
T ss_pred CcEEEECCCCCccchHHHHH----HHHHHHHhcCEEEEECCC--------CCC------C------------CCCCC---
Confidence 5799999999 8888898 555566666999999988 110 0 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ ....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+
T Consensus 84 ----------------~------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~-----p~~v~~lvl 136 (291)
T 2wue_A 84 ----------------E------HGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDY-----PARAGRLVL 136 (291)
T ss_dssp ----------------C------CSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHS-----TTTEEEEEE
T ss_pred ----------------C------CCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhC-----hHhhcEEEE
Confidence 0 01235556666777777655 4458999999999999999854 567899999
Q ss_pred ecCCCCCc--------------------c---------------------c-----------------------------
Q 007311 529 CSGFALHS--------------------A---------------------E----------------------------- 538 (608)
Q Consensus 529 isG~~~~~--------------------~---------------------~----------------------------- 538 (608)
+++..... . +
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (291)
T 2wue_A 137 MGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGAD 216 (291)
T ss_dssp ESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTT
T ss_pred ECCCCCCccccccccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccc
Confidence 88643100 0 0
Q ss_pred -------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. .+.+.|.+||.
T Consensus 217 ~~~~~~~~~l~~i~~P~lvi~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 217 FEAGMMWREVYRLRQPVLLIWGR---EDRVNPLDGALVALKTIPR--AQLHVFGQCGHWVQVEKFDEFNKLTIEFLG 288 (291)
T ss_dssp GGGGCGGGTGGGCCSCEEEEEET---TCSSSCGGGGHHHHHHSTT--EEEEEESSCCSCHHHHTHHHHHHHHHHHTT
T ss_pred cccchhHHHHhhCCCCeEEEecC---CCCCCCHHHHHHHHHHCCC--CeEEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 0012568999999999 8999999999999998876 555555 5699875532 24566667664
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=136.35 Aligned_cols=163 Identities=17% Similarity=0.182 Sum_probs=110.3
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCCc
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGK 453 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 453 (608)
.||||||+|.++..|. .+.+.|.++++++.+|.| .+. . +..+ .
T Consensus 15 ~vvllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G------~-------S~~~-----~------- 57 (258)
T 1m33_A 15 HLVLLHGWGLNAEVWR----CIDEELSSHFTLHLVDLP--------GFG------R-------SRGF-----G------- 57 (258)
T ss_dssp EEEEECCTTCCGGGGG----GTHHHHHTTSEEEEECCT--------TST------T-------CCSC-----C-------
T ss_pred eEEEECCCCCChHHHH----HHHHHhhcCcEEEEeeCC--------CCC------C-------CCCC-----C-------
Confidence 7999999999999999 555556667999999988 110 0 0000 0
Q ss_pred cccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 454 RETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 454 ~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
..++++.++.|.+.+. ....|+||||||.+|+.+|.++ +..++++|++++.+
T Consensus 58 --------------------~~~~~~~~~~l~~~l~---~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~~ 109 (258)
T 1m33_A 58 --------------------ALSLADMAEAVLQQAP---DKAIWLGWSLGGLVASQIALTH-----PERVRALVTVASSP 109 (258)
T ss_dssp --------------------CCCHHHHHHHHHTTSC---SSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCS
T ss_pred --------------------CcCHHHHHHHHHHHhC---CCeEEEEECHHHHHHHHHHHHh-----hHhhceEEEECCCC
Confidence 0124444444444443 4458999999999999999854 45688999987642
Q ss_pred CCcc------------------------------------------------------------c---------------
Q 007311 534 LHSA------------------------------------------------------------E--------------- 538 (608)
Q Consensus 534 ~~~~------------------------------------------------------------~--------------- 538 (608)
.... .
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (258)
T 1m33_A 110 CFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLR 189 (258)
T ss_dssp CCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCT
T ss_pred CccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHH
Confidence 1100 0
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+|+|+ +|.++|.+.++++.+.+++ .++++. ++||.++.+. ++.+.|.+||.+
T Consensus 190 ~~l~~i~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 190 QPLQNVSMPFLRLYGY---LDGLVPRKVVPMLDKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (258)
T ss_dssp TGGGGCCSCEEEEEET---TCSSSCGGGCC-CTTTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred HHHhhCCCCEEEEeec---CCCCCCHHHHHHHHHhCcc--ceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 0123578999999999 8999998888888877765 455555 5699875432 356777788754
|
| >1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X | Back alignment and structure |
|---|
Probab=99.45 E-value=1e-13 Score=140.97 Aligned_cols=100 Identities=13% Similarity=0.139 Sum_probs=79.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC--------------chH
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD--------------LPT 195 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~--------------~~~ 195 (608)
..|+++++.+++++ ++++|||||+..||..|||+|+ ++.+...+.+ |..
T Consensus 9 ~~is~~~l~~~l~~-------------~~~~iiDvR~~~ey~~ghIpgA----~~ip~~~l~~~~~~~~~~~~~~~~~~~ 71 (271)
T 1e0c_A 9 LVIEPADLQARLSA-------------PELILVDLTSAARYAEGHIPGA----RFVDPKRTQLGQPPAPGLQPPREQLES 71 (271)
T ss_dssp SEECHHHHHTTTTC-------------TTEEEEECSCHHHHHHCBSTTC----EECCGGGGSCCCTTCTTSCCCHHHHHH
T ss_pred ceeeHHHHHHhccC-------------CCeEEEEcCCcchhhhCcCCCC----EECCHHHhccCCCCCCCCCCCHHHHHH
Confidence 57899999998864 5789999999999999999994 4443333221 222
Q ss_pred HHHhhhhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 WIDNNAEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~~~~~~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.+ +...++++||+||.+|. |+.+|+..|+.. ||+||+.|.||+.+|.++
T Consensus 72 ~~~~-~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~--G~~~v~~L~GG~~~w~~~ 123 (271)
T 1e0c_A 72 LFGE-LGHRPEAVYVVYDDEGGGWAGRFIWLLDVI--GQQRYHYLNGGLTAWLAE 123 (271)
T ss_dssp HHHH-HTCCTTCEEEEECSSSSHHHHHHHHHHHHT--TCCCEEEETTHHHHHHHT
T ss_pred HHHH-cCCCCCCeEEEEcCCCCccHHHHHHHHHHc--CCCCeEEecCCHHHHHHc
Confidence 2322 22468999999999998 999999999997 999999999999999875
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.9e-12 Score=130.18 Aligned_cols=108 Identities=18% Similarity=0.133 Sum_probs=84.4
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccchHHH
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
...++++|+|+||.+++.++.. .++++++|+..++...... ....+|++|+|++||+ +|+++|.+.+
T Consensus 147 ~~rv~~~G~S~GG~~a~~~a~~------~pri~Aav~~~~~~~~~~~~~~~~~a~~i~~P~Li~hG~---~D~~vp~~~~ 217 (259)
T 4ao6_A 147 PRPTGWWGLSMGTMMGLPVTAS------DKRIKVALLGLMGVEGVNGEDLVRLAPQVTCPVRYLLQW---DDELVSLQSG 217 (259)
T ss_dssp CCCEEEEECTHHHHHHHHHHHH------CTTEEEEEEESCCTTSTTHHHHHHHGGGCCSCEEEEEET---TCSSSCHHHH
T ss_pred CceEEEEeechhHHHHHHHHhc------CCceEEEEEeccccccccccchhhhhccCCCCEEEEecC---CCCCCCHHHH
Confidence 4566899999999999999874 3467777765554433221 3456899999999999 8999999999
Q ss_pred HHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 568 KELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 568 ~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+++.+.+......++.++++|.-....+..+.+.+||.+.|
T Consensus 218 ~~l~~al~~~~k~l~~~~G~H~~~p~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 218 LELFGKLGTKQKTLHVNPGKHSAVPTWEMFAGTVDYLDQRL 258 (259)
T ss_dssp HHHHHHCCCSSEEEEEESSCTTCCCHHHHTHHHHHHHHHHC
T ss_pred HHHHHHhCCCCeEEEEeCCCCCCcCHHHHHHHHHHHHHHhc
Confidence 99999997655778888998864333456688899999876
|
| >2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.6e-14 Score=127.25 Aligned_cols=108 Identities=10% Similarity=0.187 Sum_probs=70.2
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC--------CC--chHHHHhh
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF--------SD--LPTWIDNN 200 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~--------~~--~~~~~~~~ 200 (608)
.|+++|+.++|+... ...-.+++++|||||++.||+.|||+|+ ++.+...+ .. ++..+...
T Consensus 2 ~Is~~~l~~~l~~~~-----~~~l~~~~~~iiDvR~~~e~~~ghIpgA----~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 72 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCS-----KSHLPSQGPVIIDCRPFMEYNKSHIQGA----VHINCADKISRRRLQQGKITVLDLISCR 72 (142)
T ss_dssp EECHHHHHHHHHC---------------CEEEECSCHHHHHHEEETTC----EECCCSSHHHHHHHHTTSSCHHHHHHTT
T ss_pred ccCHHHHHHHHHhcc-----cccCCCCCCEEEEeCCHHHhhhhhccCc----cccCccHHHHHHHhhcCCcchhhhCCCh
Confidence 589999999554210 0000125789999999999999999994 44332111 00 11111100
Q ss_pred hh--hc---CCCeEEEEcCCCccH---------HHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 201 AE--QL---QGKHVLMYCTGGIRC---------EMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 201 ~~--~~---k~k~Iv~yCtgGiR~---------~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
.. .. ++++||+||.+|.|+ ..++.+|+.. || +||.|+||+.+|.++.
T Consensus 73 ~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~--G~-~v~~l~GG~~~w~~~g 133 (142)
T 2ouc_A 73 EGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKRE--GK-EPLVLKGGLSSFKQNH 133 (142)
T ss_dssp SCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHT--TC-CCEEETTHHHHHTTTC
T ss_pred hhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHc--CC-cEEEEccCHHHHHHHC
Confidence 00 01 278999999999986 4578888887 99 9999999999998764
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.8e-13 Score=139.69 Aligned_cols=172 Identities=15% Similarity=0.128 Sum_probs=120.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++++...|..++..|.+ .++++|.+|.| ... ...+-.
T Consensus 47 g~~vvllHG~~~~~~~w~~~~~~L~~---~g~rvia~Dl~--------G~G------------------~S~~~~----- 92 (310)
T 1b6g_A 47 EDVFLCLHGEPTWSYLYRKMIPVFAE---SGARVIAPDFF--------GFG------------------KSDKPV----- 92 (310)
T ss_dssp SCEEEECCCTTCCGGGGTTTHHHHHH---TTCEEEEECCT--------TST------------------TSCEES-----
T ss_pred CCEEEEECCCCCchhhHHHHHHHHHh---CCCeEEEeCCC--------CCC------------------CCCCCC-----
Confidence 46799999999999999955555543 24999999988 110 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ .....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+++
T Consensus 93 --------------~-----~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~-----P~rv~~Lvl~~ 148 (310)
T 1b6g_A 93 --------------D-----EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMAD-----PSRFKRLIIMN 148 (310)
T ss_dssp --------------C-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGS-----GGGEEEEEEES
T ss_pred --------------C-----cCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhC-----hHhheEEEEec
Confidence 0 001246667777888888765 4558999999999999999854 56789999987
Q ss_pred CCC---CC-----------c-----------------------------c-c------------c---------------
Q 007311 531 GFA---LH-----------S-----------------------------A-E------------F--------------- 539 (608)
Q Consensus 531 G~~---~~-----------~-----------------------------~-~------------~--------------- 539 (608)
+.. +. . . + .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (310)
T 1b6g_A 149 AXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQ 228 (310)
T ss_dssp CCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHS
T ss_pred cccccCCccccchhhhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcc
Confidence 533 10 0 0 0 0
Q ss_pred --------------ccC-CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE-EeCCCCcCCCChh--hHHHHH
Q 007311 540 --------------EHR-SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII-EHDCGHIIPTRSP--YIDEIK 601 (608)
Q Consensus 540 --------------~~~-~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv-~~~gGH~ip~~~~--~~~~i~ 601 (608)
... .|++|+|+|+|+ +|.++| +.++++++.+++....++ ..++||.++. .+ +.+.|.
T Consensus 229 ~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~---~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~ 303 (310)
T 1b6g_A 229 RDQAXIDISTEAISFWQNDWNGQTFMAIGM---KDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREAL 303 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSEEEEEEET---TCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHH
T ss_pred cccchhhhhhhHhhhhhccccCceEEEecc---Ccchhh-hHHHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHH
Confidence 012 789999999999 899999 889999999987533333 2567999776 43 678888
Q ss_pred HHHHH
Q 007311 602 SFLQR 606 (608)
Q Consensus 602 ~Fl~~ 606 (608)
+||.+
T Consensus 304 ~Fl~~ 308 (310)
T 1b6g_A 304 KHFAE 308 (310)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99875
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=142.60 Aligned_cols=172 Identities=16% Similarity=0.220 Sum_probs=120.1
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++|||+||++.+...|. .+.+.| ..+++++.+|.| ... ...
T Consensus 23 ~gp~VV~lHG~~~~~~~~~----~l~~~La~~Gy~Vi~~D~r--------G~G-----------------------~S~- 66 (456)
T 3vdx_A 23 TGVPVVLIHGFPLSGHSWE----RQSAALLDAGYRVITYDRR--------GFG-----------------------QSS- 66 (456)
T ss_dssp SSEEEEEECCTTCCGGGGT----THHHHHHHHTEEEEEECCT--------TST-----------------------TSC-
T ss_pred CCCEEEEECCCCCcHHHHH----HHHHHHHHCCcEEEEECCC--------CCC-----------------------CCC-
Confidence 3478999999999999998 444444 347999999988 110 000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
... ....+++.++.+.++++..+ ...+|+|||+||.+|+.++.... +..++++|+
T Consensus 67 -------------~~~-------~~~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~----p~~v~~lVl 122 (456)
T 3vdx_A 67 -------------QPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYG----TARIAAVAF 122 (456)
T ss_dssp -------------CCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHC----SSSEEEEEE
T ss_pred -------------CCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcc----hhheeEEEE
Confidence 000 01235555566666666544 45589999999999999988652 567999999
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++..+....
T Consensus 123 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (456)
T 3vdx_A 123 LASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA 202 (456)
T ss_dssp ESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHG
T ss_pred eCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhh
Confidence 9987642100
Q ss_pred ---------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHHH
Q 007311 539 ---------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 ---------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+ ..+.+.+.+++ .+++..+ +||.+....+ ..+.|.+||.
T Consensus 203 ~~~~~~d~~~~l~~i~~PvLiI~G~---~D~~vp~~~~~~~l~~~~~~--~~~~~i~gagH~~~~e~p~~v~~~I~~FL~ 277 (456)
T 3vdx_A 203 PTTWYTDFRADIPRIDVPALILHGT---GDRTLPIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLA 277 (456)
T ss_dssp GGGTTCCCTTTSTTCCSCCEEEEET---TCSSSCGGGTHHHHHHHCTT--SEEEEETTCCSCTTTTTHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHhhhCCCCEEEEEeC---CCCCcCHHHHHHHHHHHCCC--ceEEEeCCCCCcchhhCHHHHHHHHHHHHH
Confidence 0134789999999999 89999998 67778787765 5655554 6999765433 6788888887
Q ss_pred Hh
Q 007311 606 RF 607 (608)
Q Consensus 606 ~~ 607 (608)
+.
T Consensus 278 ~~ 279 (456)
T 3vdx_A 278 KA 279 (456)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.44 E-value=5.4e-13 Score=138.55 Aligned_cols=123 Identities=20% Similarity=0.162 Sum_probs=91.4
Q ss_pred cHHHHHHHHHHHHhHhC-Cce-EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----------------
Q 007311 476 GLDVSLAYLKTIFSQEG-PFD-GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA---------------- 537 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~-~~~-~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~---------------- 537 (608)
.+++.++.+.++++..+ ... .|+||||||.+|+.+|.+. +..++++|++++......
T Consensus 126 ~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (366)
T 2pl5_A 126 SIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAY-----PNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSD 200 (366)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHS-----TTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhC-----cHhhhheeEeccCccCCCccchhhHHHHHHHHhC
Confidence 46666777777777654 445 6999999999999999854 557999999987543210
Q ss_pred ---------------------------------------------------c----------------------------
Q 007311 538 ---------------------------------------------------E---------------------------- 538 (608)
Q Consensus 538 ---------------------------------------------------~---------------------------- 538 (608)
.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (366)
T 2pl5_A 201 PNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKA 280 (366)
T ss_dssp TTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHH
T ss_pred cccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhh
Confidence 0
Q ss_pred -------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEe--CCCCcCCCCh--hhHHH
Q 007311 539 -------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEH--DCGHIIPTRS--PYIDE 599 (608)
Q Consensus 539 -------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~--~gGH~ip~~~--~~~~~ 599 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.++.. ..++++. ++||.+..+. ...+.
T Consensus 281 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 357 (366)
T 2pl5_A 281 LDHYSLGKGKELTAALSNATCRFLVVSYS---SDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEI 357 (366)
T ss_dssp HHHCBCCSHHHHHHHHTTCCSEEEEEEET---TCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHH
T ss_pred hhhhccccccchhhhhccCCCCEEEEecC---CCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcchhhcChhHHHHH
Confidence 0235678999999999 89999999999999999831 2566555 6799876542 46788
Q ss_pred HHHHHHH
Q 007311 600 IKSFLQR 606 (608)
Q Consensus 600 i~~Fl~~ 606 (608)
|.+||.+
T Consensus 358 i~~fl~~ 364 (366)
T 2pl5_A 358 LKGFLEN 364 (366)
T ss_dssp HHHHHHC
T ss_pred HHHHHcc
Confidence 8888875
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.44 E-value=4.5e-13 Score=138.45 Aligned_cols=168 Identities=18% Similarity=0.163 Sum_probs=116.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++.||||||++.+...|. .+...|...++++.+|.| ++. . + ....
T Consensus 43 ~~~vvllHG~~~~~~~w~----~~~~~L~~~~~via~Dl~--------GhG------~-------S-----~~~~----- 87 (318)
T 2psd_A 43 ENAVIFLHGNATSSYLWR----HVVPHIEPVARCIIPDLI--------GMG------K-------S-----GKSG----- 87 (318)
T ss_dssp TSEEEEECCTTCCGGGGT----TTGGGTTTTSEEEEECCT--------TST------T-------C-----CCCT-----
T ss_pred CCeEEEECCCCCcHHHHH----HHHHHhhhcCeEEEEeCC--------CCC------C-------C-----CCCC-----
Confidence 357999999999999999 666677767899999988 110 0 0 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. ....++...+.|.++++..+ ....|+||||||++|+.+|.++ +..++++|++
T Consensus 88 ---------------~-----~~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~-----P~~v~~lvl~ 142 (318)
T 2psd_A 88 ---------------N-----GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEH-----QDRIKAIVHM 142 (318)
T ss_dssp ---------------T-----SCCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHC-----TTSEEEEEEE
T ss_pred ---------------C-----CccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhC-----hHhhheEEEe
Confidence 0 01235666777888888765 4568999999999999999854 5679999997
Q ss_pred cCCCCCc--------------------------------------------cc------------c--------------
Q 007311 530 SGFALHS--------------------------------------------AE------------F-------------- 539 (608)
Q Consensus 530 sG~~~~~--------------------------------------------~~------------~-------------- 539 (608)
++...+. .. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
T 2psd_A 143 ESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREI 222 (318)
T ss_dssp EECCSCBSCCTTSCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTC
T ss_pred ccccCCccchhhhhhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccc
Confidence 5321000 00 0
Q ss_pred -------------------ccCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hH
Q 007311 540 -------------------EHRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YI 597 (608)
Q Consensus 540 -------------------~~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~ 597 (608)
....+ ++|+|+|+|+ +| +++. .++++.+.+++ .++++.++||.++.+.+ +.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~---~D-~~~~-~~~~~~~~~~~--~~~~~i~~gH~~~~e~p~~~~ 295 (318)
T 2psd_A 223 PLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESD---PG-FFSN-AIVEGAKKFPN--TEFVKVKGLHFLQEDAPDEMG 295 (318)
T ss_dssp CBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEE---EC-SSHH-HHHHHHTTSSS--EEEEEEEESSSGGGTCHHHHH
T ss_pred cccccccchhHHHHHHHHHHhccccCCCeEEEEec---cc-cCcH-HHHHHHHhCCC--cEEEEecCCCCCHhhCHHHHH
Confidence 00135 8999999999 89 8887 88888888776 34433477998766533 67
Q ss_pred HHHHHHHHH
Q 007311 598 DEIKSFLQR 606 (608)
Q Consensus 598 ~~i~~Fl~~ 606 (608)
+.|.+||.+
T Consensus 296 ~~i~~fl~~ 304 (318)
T 2psd_A 296 KYIKSFVER 304 (318)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888865
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.44 E-value=5.5e-13 Score=133.97 Aligned_cols=168 Identities=15% Similarity=0.140 Sum_probs=116.7
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
..++|||+||+++++..|. .+.+.|.+.++++.+|.| ... . +..+ .
T Consensus 29 ~~~~vv~lHG~~~~~~~~~----~~~~~L~~~~~vi~~D~~--------G~G------~-------S~~~-----~---- 74 (301)
T 3kda_A 29 QGPLVMLVHGFGQTWYEWH----QLMPELAKRFTVIAPDLP--------GLG------Q-------SEPP-----K---- 74 (301)
T ss_dssp SSSEEEEECCTTCCGGGGT----TTHHHHTTTSEEEEECCT--------TST------T-------CCCC-----S----
T ss_pred CCCEEEEECCCCcchhHHH----HHHHHHHhcCeEEEEcCC--------CCC------C-------CCCC-----C----
Confidence 3468999999999999999 666777766999999988 110 0 0000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-Cc-eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PF-DGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~-~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
....+++..+.+.++++..+ .. ..|+|||+||.+|+.+|.++ +..++++|+
T Consensus 75 ----------------------~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl 127 (301)
T 3kda_A 75 ----------------------TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKN-----QADIARLVY 127 (301)
T ss_dssp ----------------------SCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHC-----GGGEEEEEE
T ss_pred ----------------------CCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhC-----hhhccEEEE
Confidence 01235566666777776654 33 58999999999999999854 456999999
Q ss_pred ecCCCCCc----------------------------cc------------------------------------------
Q 007311 529 CSGFALHS----------------------------AE------------------------------------------ 538 (608)
Q Consensus 529 isG~~~~~----------------------------~~------------------------------------------ 538 (608)
+++..+.. ..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (301)
T 3kda_A 128 MEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHS 207 (301)
T ss_dssp ESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHH
T ss_pred EccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccc
Confidence 99853210 00
Q ss_pred ----------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh-
Q 007311 539 ----------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS- 594 (608)
Q Consensus 539 ----------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~- 594 (608)
.....+++|+|+++|+ +| ++...++.+.+.+++ .+++..+ +||.+..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~---~D--~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p 280 (301)
T 3kda_A 208 LNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGA---GG--MGTFQLEQMKAYAED--VEGHVLPGCGHWLPEECA 280 (301)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECST---TS--CTTHHHHHHHTTBSS--EEEEEETTCCSCHHHHTH
T ss_pred cchHHHHHHhhccchhhcccchhhccccCcceEEEecC---CC--CChhHHHHHHhhccc--CeEEEcCCCCcCchhhCH
Confidence 0011889999999999 78 777888888888876 6666665 699976532
Q ss_pred -hhHHHHHHHHHH
Q 007311 595 -PYIDEIKSFLQR 606 (608)
Q Consensus 595 -~~~~~i~~Fl~~ 606 (608)
...+.|.+|+++
T Consensus 281 ~~~~~~i~~~l~~ 293 (301)
T 3kda_A 281 APMNRLVIDFLSR 293 (301)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 255666666653
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.4e-13 Score=138.87 Aligned_cols=195 Identities=13% Similarity=0.071 Sum_probs=122.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
...+.||++||+|++...|. .+...+..++.++.+|.|-.-. +. . .+..........|+...
T Consensus 106 ~~~p~vv~~HG~g~~~~~~~----~~~~~~~~G~~v~~~D~rG~g~---------s~-~---~~~~~~~~~~~~~~~~g- 167 (346)
T 3fcy_A 106 GKHPALIRFHGYSSNSGDWN----DKLNYVAAGFTVVAMDVRGQGG---------QS-Q---DVGGVTGNTLNGHIIRG- 167 (346)
T ss_dssp SCEEEEEEECCTTCCSCCSG----GGHHHHTTTCEEEEECCTTSSS---------SC-C---CCCCCSSCCSBCSSSTT-
T ss_pred CCcCEEEEECCCCCCCCChh----hhhHHHhCCcEEEEEcCCCCCC---------CC-C---CCcccCCCCcCcceecc-
Confidence 45688999999999999888 4444556789999999882100 00 0 00000001111222100
Q ss_pred CCCccccccccCCCCCCCccc--ccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQY--QQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~--~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.+. ++.++ .....++..+++++...-.......+|+|+||||.+|+.+|.+. + .++++|
T Consensus 168 -----------~~~--~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~-----p-~v~~~v 228 (346)
T 3fcy_A 168 -----------LDD--DADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALE-----P-RVRKVV 228 (346)
T ss_dssp -----------TTS--CGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-----T-TCCEEE
T ss_pred -----------ccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhC-----c-cccEEE
Confidence 000 11111 11123333444443322111123457999999999999999854 2 399999
Q ss_pred EecCCCCCccc-----------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH
Q 007311 528 LCSGFALHSAE-----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA 566 (608)
Q Consensus 528 lisG~~~~~~~-----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~ 566 (608)
+++++...... .....+++|+|+++|+ +|.++|.+.
T Consensus 229 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~---~D~~~~~~~ 305 (346)
T 3fcy_A 229 SEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGL---MDQVCPPST 305 (346)
T ss_dssp EESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEET---TCSSSCHHH
T ss_pred ECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeC---CCCcCCHHH
Confidence 99887532100 1235788999999999 899999999
Q ss_pred HHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHHHHHHHh
Q 007311 567 SKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 567 ~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
+.++++.+... .++++++ .||.+. .+..+.+.+||.+.
T Consensus 306 ~~~~~~~~~~~-~~~~~~~~~gH~~~--~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 306 VFAAYNNIQSK-KDIKVYPDYGHEPM--RGFGDLAMQFMLEL 344 (346)
T ss_dssp HHHHHTTCCSS-EEEEEETTCCSSCC--TTHHHHHHHHHHTT
T ss_pred HHHHHHhcCCC-cEEEEeCCCCCcCH--HHHHHHHHHHHHHh
Confidence 99999888753 6777765 599987 47889999999874
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=132.47 Aligned_cols=168 Identities=20% Similarity=0.248 Sum_probs=113.2
Q ss_pred EEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 374 RILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 374 ~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+||||||+| .+...|..++ .+.|...++++.+|.| .+. .-+.+
T Consensus 38 ~vvllHG~~~~~~~~~~~~~~~---~~~l~~~~~vi~~D~~--------G~G---------------------~S~~~-- 83 (289)
T 1u2e_A 38 TVVLLHGSGPGATGWANFSRNI---DPLVEAGYRVILLDCP--------GWG---------------------KSDSV-- 83 (289)
T ss_dssp EEEEECCCSTTCCHHHHTTTTH---HHHHHTTCEEEEECCT--------TST---------------------TSCCC--
T ss_pred eEEEECCCCcccchhHHHHHhh---hHHHhcCCeEEEEcCC--------CCC---------------------CCCCC--
Confidence 799999998 6777777333 0455556999999988 110 00000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.+ ....++...+.+.++++..+ ....|+||||||++|+.+|.+. +..++++|++
T Consensus 84 --------------~~------~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~-----p~~v~~lvl~ 138 (289)
T 1u2e_A 84 --------------VN------SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKW-----PERVGKLVLM 138 (289)
T ss_dssp --------------CC------SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEE
T ss_pred --------------Cc------cccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHC-----HHhhhEEEEE
Confidence 00 01235555666777776654 3458999999999999999854 4568899988
Q ss_pred cCCCC--------C--------------c-------------------cc------------------------------
Q 007311 530 SGFAL--------H--------------S-------------------AE------------------------------ 538 (608)
Q Consensus 530 sG~~~--------~--------------~-------------------~~------------------------------ 538 (608)
++... . . .+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (289)
T 1u2e_A 139 GGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQF 218 (289)
T ss_dssp SCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCS
T ss_pred CCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccc
Confidence 76431 0 0 00
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. .+.+.|.+||.
T Consensus 219 ~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 219 PDFGPRLAEIKAQTLIVWGR---NDRFVPMDAGLRLLSGIAG--SELHIFRDCGHWAQWEHADAFNQLVLNFLA 287 (289)
T ss_dssp CCCGGGGGGCCSCEEEEEET---TCSSSCTHHHHHHHHHSTT--CEEEEESSCCSCHHHHTHHHHHHHHHHHHT
T ss_pred cchhhHHhhcCCCeEEEeeC---CCCccCHHHHHHHHhhCCC--cEEEEeCCCCCchhhcCHHHHHHHHHHHhc
Confidence 0123578999999999 8999999999999999876 455444 5799975532 25566777764
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.8e-12 Score=129.99 Aligned_cols=194 Identities=13% Similarity=0.089 Sum_probs=119.5
Q ss_pred CCccEEEEecCCCCC-hHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQN-ASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~n-a~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.+.||++||+|++ ...|.... .| ...++.++.+|.+-.-. +.. +..........|+.
T Consensus 80 ~~~p~vv~~HG~~~~~~~~~~~~~-~l---~~~g~~v~~~d~rg~g~----------s~~----~~~~~~~~~~~~~~-- 139 (318)
T 1l7a_A 80 GPHPAIVKYHGYNASYDGEIHEMV-NW---ALHGYATFGMLVRGQQR----------SED----TSISPHGHALGWMT-- 139 (318)
T ss_dssp SCEEEEEEECCTTCCSGGGHHHHH-HH---HHTTCEEEEECCTTTSS----------SCC----CCCCSSCCSSSSTT--
T ss_pred CCccEEEEEcCCCCCCCCCccccc-ch---hhCCcEEEEecCCCCCC----------CCC----cccccCCcccccee--
Confidence 456789999999999 88877332 33 34589999999872100 000 00000000011111
Q ss_pred CCCCccccccccCCCCCCCccc--ccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQY--QQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~--~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.+..++.++ ....+++.+++++|.+.........+|+|||+||.+|+.++.+. ..++++
T Consensus 140 -------------~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~------~~~~~~ 200 (318)
T 1l7a_A 140 -------------KGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALS------DIPKAA 200 (318)
T ss_dssp -------------TTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHC------SCCSEE
T ss_pred -------------ccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccC------CCccEE
Confidence 001111111 12233444444444332111123457999999999999999853 347888
Q ss_pred EEecCCCCCcc---------------------------------------ccccCCCCCCEEEEEcCCCCCCcccchHHH
Q 007311 527 ILCSGFALHSA---------------------------------------EFEHRSINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 527 IlisG~~~~~~---------------------------------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
|+++++..... ......+++|+|+++|+ +|.++|.+.+
T Consensus 201 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~---~D~~~~~~~~ 277 (318)
T 1l7a_A 201 VADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGL---IDKVTPPSTV 277 (318)
T ss_dssp EEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEET---TCSSSCHHHH
T ss_pred EecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEecc---CCCCCCcccH
Confidence 88877543110 01235678999999999 8999999999
Q ss_pred HHHHHHhccCCcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 568 KELAKAFEEGCSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 568 ~~l~~~~~~~~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+++++.+... .+++++++ ||.. ..+..+.+.+||.++|
T Consensus 278 ~~~~~~l~~~-~~~~~~~~~~H~~--~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 278 FAAYNHLETK-KELKVYRYFGHEY--IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp HHHHHHCCSS-EEEEEETTCCSSC--CHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCC-eeEEEccCCCCCC--cchhHHHHHHHHHHHh
Confidence 9999998864 66666665 9994 3478899999998764
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-12 Score=135.11 Aligned_cols=170 Identities=18% Similarity=0.213 Sum_probs=108.4
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+++||++||+|.+...|. .+++.|. .+++++.+|.| .+ ++. +..+ +
T Consensus 34 ~~~~VvllHG~g~~~~~~~----~~~~~L~~~G~~Vi~~D~r--------Gh-----~G~-------S~~~---~----- 81 (305)
T 1tht_A 34 KNNTILIASGFARRMDHFA----GLAEYLSTNGFHVFRYDSL--------HH-----VGL-------SSGS---I----- 81 (305)
T ss_dssp CSCEEEEECTTCGGGGGGH----HHHHHHHTTTCCEEEECCC--------BC-----C----------------------
T ss_pred CCCEEEEecCCccCchHHH----HHHHHHHHCCCEEEEeeCC--------CC-----CCC-------CCCc---c-----
Confidence 4578999999999999999 6666664 46999999988 11 000 0000 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
..++ +....+++...+++|. .. .....|+||||||++|+.+|. . + .++++|+
T Consensus 82 -------------~~~~---~~~~~~D~~~~~~~l~----~~~~~~~~lvGhSmGG~iA~~~A~-----~-~-~v~~lvl 134 (305)
T 1tht_A 82 -------------DEFT---MTTGKNSLCTVYHWLQ----TKGTQNIGLIAASLSARVAYEVIS-----D-L-ELSFLIT 134 (305)
T ss_dssp --------------CCC---HHHHHHHHHHHHHHHH----HTTCCCEEEEEETHHHHHHHHHTT-----T-S-CCSEEEE
T ss_pred -------------ccee---hHHHHHHHHHHHHHHH----hCCCCceEEEEECHHHHHHHHHhC-----c-c-CcCEEEE
Confidence 0000 0011122333333332 22 345589999999999999987 2 3 6889999
Q ss_pred ecCCCCCc-------------------------------cc------------------cccCCCCCCEEEEEcCCCCCC
Q 007311 529 CSGFALHS-------------------------------AE------------------FEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 529 isG~~~~~-------------------------------~~------------------~~~~~i~~PvL~i~G~~~~~D 559 (608)
+++..... .. .....+++|+|++||+ +|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~---~D 211 (305)
T 1tht_A 135 AVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTAN---ND 211 (305)
T ss_dssp ESCCSCHHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEET---TC
T ss_pred ecCchhHHHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeC---CC
Confidence 87653100 00 0134689999999999 89
Q ss_pred cccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHH
Q 007311 560 RQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
+++|.+.++++++.+.....+++.. ++||.+...+ +.+.+|++
T Consensus 212 ~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~e~p---~~~~~fl~ 255 (305)
T 1tht_A 212 DWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENL---VVLRNFYQ 255 (305)
T ss_dssp TTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTTSSH---HHHHHHHH
T ss_pred CccCHHHHHHHHHhcCCCCcEEEEeCCCCCchhhCc---hHHHHHHH
Confidence 9999999999998876433566555 5699986433 34555554
|
| >1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-13 Score=139.10 Aligned_cols=101 Identities=17% Similarity=0.184 Sum_probs=79.7
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh--------ccccCCCCccccCcccccCC---------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR--------IGKFRTPSVETLDPEIRQFS--------- 191 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~--------~Gh~~g~~~~~l~~~~~~~~--------- 191 (608)
...++++++.+++++ ++++|||||++.||+ .|||+|+ ++.+...+.
T Consensus 146 ~~~i~~~~l~~~l~~-------------~~~~liDvR~~~e~~g~~~~~~~~ghIpgA----~~ip~~~~~~~~~~~~~~ 208 (271)
T 1e0c_A 146 EPTASRDYLLGRLGA-------------ADLAIWDARSPQEYRGEKVLAAKGGHIPGA----VNFEWTAAMDPSRALRIR 208 (271)
T ss_dssp TTBCCHHHHHHHTTC-------------TTEEEEECSCHHHHTTSSCCSSSCSBCTTC----EECCGGGGEEGGGTTEEC
T ss_pred cccccHHHHHHHhcC-------------CCcEEEEcCChhhcCCccCCCCcCCcCCCc----eeccHHHhCCCCCCCCCH
Confidence 456899999998865 478999999999999 9999994 444332221
Q ss_pred -CchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 192 -DLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 192 -~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++...+.+ ....++++||+||.+|.||..|+..|+.. ||+||++|.||+.+|.+.
T Consensus 209 ~~l~~~~~~-~~~~~~~~ivvyC~~G~rs~~a~~~L~~~--G~~~v~~l~GG~~~W~~~ 264 (271)
T 1e0c_A 209 TDIAGRLEE-LGITPDKEIVTHCQTHHRSGLTYLIAKAL--GYPRVKGYAGSWGEWGNH 264 (271)
T ss_dssp TTHHHHHHH-TTCCTTSEEEEECSSSSHHHHHHHHHHHT--TCSCEEECSSHHHHHTTC
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCchHHHHHHHHHHHHc--CCCCceeeCCcHHHHhcC
Confidence 12222221 23578999999999999999999999987 999999999999999764
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-12 Score=128.65 Aligned_cols=170 Identities=21% Similarity=0.214 Sum_probs=116.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++.||||||++.+...|. .+.+.|.++++++.+|.| .+. ...+-.
T Consensus 29 ~~~vvllHG~~~~~~~~~----~~~~~L~~~~~vi~~Dl~--------G~G------------------~S~~~~----- 73 (285)
T 3bwx_A 29 RPPVLCLPGLTRNARDFE----DLATRLAGDWRVLCPEMR--------GRG------------------DSDYAK----- 73 (285)
T ss_dssp SCCEEEECCTTCCGGGGH----HHHHHHBBTBCEEEECCT--------TBT------------------TSCCCS-----
T ss_pred CCcEEEECCCCcchhhHH----HHHHHhhcCCEEEeecCC--------CCC------------------CCCCCC-----
Confidence 457999999999999999 777777778999999988 110 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+. ....++...+.+.++++..+ ....|+||||||++|+.+|.++ +..++++|+++
T Consensus 74 --------------~~-----~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~ 129 (285)
T 3bwx_A 74 --------------DP-----MTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAAN-----PARIAAAVLND 129 (285)
T ss_dssp --------------SG-----GGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred --------------Cc-----cccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhC-----chheeEEEEec
Confidence 00 01235555666777777655 4558999999999999999864 45688888864
Q ss_pred CCCCC--------------------------------------c-cc------------c-c------------------
Q 007311 531 GFALH--------------------------------------S-AE------------F-E------------------ 540 (608)
Q Consensus 531 G~~~~--------------------------------------~-~~------------~-~------------------ 540 (608)
..+.. . .. . .
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (285)
T 3bwx_A 130 VGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAP 209 (285)
T ss_dssp CCSSCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSC
T ss_pred CCcccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhh
Confidence 21100 0 00 0 0
Q ss_pred ------------cCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC-hhhHHHHHHHHH
Q 007311 541 ------------HRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR-SPYIDEIKSFLQ 605 (608)
Q Consensus 541 ------------~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~-~~~~~~i~~Fl~ 605 (608)
...+ ++|+|+|+|+ +|.+++.+.++++++. ++ .++++.+ +||.++.+ ++.+..|.+||.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~~~~~~~~~~~~~-~~--~~~~~i~~~gH~~~~e~p~~~~~i~~fl~ 283 (285)
T 3bwx_A 210 VGATPQVDMWPLFDALATRPLLVLRGE---TSDILSAQTAAKMASR-PG--VELVTLPRIGHAPTLDEPESIAAIGRLLE 283 (285)
T ss_dssp TTCCCSSCCHHHHHHHTTSCEEEEEET---TCSSSCHHHHHHHHTS-TT--EEEEEETTCCSCCCSCSHHHHHHHHHHHT
T ss_pred hhccccchhhHHHHHccCCCeEEEEeC---CCCccCHHHHHHHHhC-CC--cEEEEeCCCCccchhhCchHHHHHHHHHH
Confidence 0012 7999999999 8999999999999888 54 6666655 59997765 345678888886
Q ss_pred H
Q 007311 606 R 606 (608)
Q Consensus 606 ~ 606 (608)
+
T Consensus 284 ~ 284 (285)
T 3bwx_A 284 R 284 (285)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.6e-13 Score=139.86 Aligned_cols=61 Identities=15% Similarity=0.197 Sum_probs=48.6
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHh----ccCCcEEEEeC--CCCcCCCC--hhhHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAF----EEGCSVIIEHD--CGHIIPTR--SPYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~----~~~~~~vv~~~--gGH~ip~~--~~~~~~i~~Fl~~~ 607 (608)
..+++|+|+|+|+ +|.++|.+.++++++.+ ++ .++++.+ +||.++.+ ....+.|.+||.+.
T Consensus 304 ~~i~~Pvlii~G~---~D~~~~~~~~~~~~~~~~~~g~~--~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~ 372 (377)
T 3i1i_A 304 SNVEANVLMIPCK---QDLLQPSRYNYKMVDLLQKQGKY--AEVYEIESINGHMAGVFDIHLFEKKVYEFLNRK 372 (377)
T ss_dssp HTCCSEEEEECBT---TCSSSCTHHHHHHHHHHHHTTCC--EEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSC
T ss_pred hhCCCCEEEEecC---CccccCHHHHHHHHHHHHhcCCC--ceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhh
Confidence 3678999999999 89999999999999998 44 6666664 59975432 34788899999864
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.2e-13 Score=134.46 Aligned_cols=175 Identities=14% Similarity=0.118 Sum_probs=122.4
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||||||+|+++..|. .+.+ |...++++.+|.|-. ..-.
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~----~~~~-l~~~~~v~~~d~~G~-----------------------------~~~~--- 61 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYA----SLPR-LKSDTAVVGLNCPYA-----------------------------RDPE--- 61 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGT----TSCC-CSSSEEEEEEECTTT-----------------------------TCGG---
T ss_pred CCCCEEEEECCCCCCHHHHH----HHHh-cCCCCEEEEEECCCC-----------------------------CCCC---
Confidence 34578999999999999999 7777 888899999998810 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
....++++.++.+.+.+.... ....|+|||+||.+|+.+|.+.++ .+..++++|
T Consensus 62 ----------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~--~~~~v~~lv 117 (265)
T 3ils_A 62 ----------------------NMNCTHGAMIESFCNEIRRRQPRGPYHLGGWSSGGAFAYVVAEALVN--QGEEVHSLI 117 (265)
T ss_dssp ----------------------GCCCCHHHHHHHHHHHHHHHCSSCCEEEEEETHHHHHHHHHHHHHHH--TTCCEEEEE
T ss_pred ----------------------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHh--CCCCceEEE
Confidence 001246666667777776653 234899999999999999986542 245689999
Q ss_pred EecCCCCCccc--------------------------------------------------cccCCCCCCEE-EEEcCCC
Q 007311 528 LCSGFALHSAE--------------------------------------------------FEHRSINCPSL-HIFGGDL 556 (608)
Q Consensus 528 lisG~~~~~~~--------------------------------------------------~~~~~i~~PvL-~i~G~~~ 556 (608)
++++..+.... .....+++|++ +++|+
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~-- 195 (265)
T 3ils_A 118 IIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAA-- 195 (265)
T ss_dssp EESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEE--
T ss_pred EEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEcc--
Confidence 99876543110 01235889988 99999
Q ss_pred CC---Cccc--------------chHHHHHHHHHhccCCcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 557 GN---DRQV--------------ANQASKELAKAFEEGCSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 557 ~~---D~~V--------------p~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+ |+.+ +......+.+.+.....++++.++ ||++..+.+..+++.++|.+||
T Consensus 196 -~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 196 -DTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp -ECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred -CCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 7 8887 444456677776623377777776 9998744466677777777765
|
| >1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=141.05 Aligned_cols=103 Identities=13% Similarity=0.141 Sum_probs=78.6
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-----------hccccCCCCccccCcccccCCC----
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-----------RIGKFRTPSVETLDPEIRQFSD---- 192 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-----------~~Gh~~g~~~~~l~~~~~~~~~---- 192 (608)
....++++|+.+++++ ++++|||||++.|| +.|||+| +++.+...+.+
T Consensus 150 ~~~~i~~~e~~~~~~~-------------~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpg----A~nip~~~~~~~~~~ 212 (280)
T 1urh_A 150 PEAVVKVTDVLLASHE-------------NTAQIIDARPAARFNAEVDEPRPGLRRGHIPG----ALNVPWTELVREGEL 212 (280)
T ss_dssp GGGBCCHHHHHHHHHH-------------TCSEEEECSCHHHHSSCCCC----CCSSSCTT----CEECCGGGGBSSSSB
T ss_pred cccEEcHHHHHHHhcC-------------CCcEEEeCCchhhcccccCCCCCCCcCccCCC----ceEeeHHHhhcCCcc
Confidence 3467999999999976 47899999999999 6999999 45544333322
Q ss_pred -chHHHHhh---hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 193 -LPTWIDNN---AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 -~~~~~~~~---~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
-++.+.+. ...+++++||+||.+|.||..|+.+|++. ||+|||+|.||+.+|...
T Consensus 213 ~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~--G~~~v~~~~GG~~~W~~~ 271 (280)
T 1urh_A 213 KTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATL--DVPNVKLYDGAWSEWGAR 271 (280)
T ss_dssp CCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHT--TCSSCEEECCSCCC----
T ss_pred CCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHc--CCCCceeeCChHHHHhcC
Confidence 11233321 13468999999999999999999999987 999999999999999763
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.8e-12 Score=128.38 Aligned_cols=178 Identities=13% Similarity=0.043 Sum_probs=119.2
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeee
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWF 445 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 445 (608)
..++.||++||.| .+...|. .+++.|. .++.++.+|.+-. + . ...|.
T Consensus 41 ~~~p~vv~~HGgg~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~--------g------~-----------s~~~~ 91 (276)
T 3hxk_A 41 YTFPAIIICPGGGYQHISQRESD----PLALAFLAQGYQVLLLNYTVM--------N------K-----------GTNYN 91 (276)
T ss_dssp CCBCEEEEECCSTTTSCCGGGSH----HHHHHHHHTTCEEEEEECCCT--------T------S-----------CCCSC
T ss_pred CCCCEEEEEcCCccccCCchhhH----HHHHHHHHCCCEEEEecCccC--------C------C-----------cCCCC
Confidence 4568999999943 5566666 4444443 4799999997711 0 0 00000
Q ss_pred ccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 446 VAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
.+.....++..++++|.+..... ....+|+||||||.+|+.++.+. ....
T Consensus 92 -----------------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~~ 144 (276)
T 3hxk_A 92 -----------------------FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSE----QIHR 144 (276)
T ss_dssp -----------------------THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSC----STTC
T ss_pred -----------------------cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhc----cCCC
Confidence 01122345667777777665432 23558999999999999999731 3567
Q ss_pred ccEEEEecCCCCCc---------------------cccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--Cc
Q 007311 523 FRFAILCSGFALHS---------------------AEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CS 579 (608)
Q Consensus 523 l~~vIlisG~~~~~---------------------~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~ 579 (608)
++++|+++++.... .......+.+|+|++||+ +|.++|.+.++++++.+... ..
T Consensus 145 ~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~vp~~~~~~~~~~l~~~~~~~ 221 (276)
T 3hxk_A 145 PKGVILCYPVTSFTFGWPSDLSHFNFEIENISEYNISEKVTSSTPPTFIWHTA---DDEGVPIYNSLKYCDRLSKHQVPF 221 (276)
T ss_dssp CSEEEEEEECCBTTSSCSSSSSSSCCCCSCCGGGBTTTTCCTTSCCEEEEEET---TCSSSCTHHHHHHHHHHHTTTCCE
T ss_pred ccEEEEecCcccHHhhCCcchhhhhcCchhhhhCChhhccccCCCCEEEEecC---CCceeChHHHHHHHHHHHHcCCCe
Confidence 99999998876521 112345778999999999 89999999999999988753 24
Q ss_pred EEEEeC-CCCcCCCCh---------------hhHHHHHHHHHH
Q 007311 580 VIIEHD-CGHIIPTRS---------------PYIDEIKSFLQR 606 (608)
Q Consensus 580 ~vv~~~-gGH~ip~~~---------------~~~~~i~~Fl~~ 606 (608)
++++++ +||.+.... ..++.+.+||++
T Consensus 222 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 264 (276)
T 3hxk_A 222 EAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLER 264 (276)
T ss_dssp EEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHH
T ss_pred EEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHh
Confidence 666665 699765421 255677777765
|
| >3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-13 Score=142.62 Aligned_cols=101 Identities=14% Similarity=0.181 Sum_probs=79.9
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhh-hhccccCCCCccccCccccc-C-----------CCchH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYE-TRIGKFRTPSVETLDPEIRQ-F-----------SDLPT 195 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E-~~~Gh~~g~~~~~l~~~~~~-~-----------~~~~~ 195 (608)
...|+++++.+++++ ++++|||||+..| |+.|||+| +++.+... + .+|..
T Consensus 39 ~~~is~~~l~~~l~~-------------~~~~iiDvR~~~e~y~~gHIpG----Ai~ip~~~~~~~~~~~~~~~~~~~~~ 101 (318)
T 3hzu_A 39 ERLVTADWLSAHMGA-------------PGLAIVESDEDVLLYDVGHIPG----AVKIDWHTDLNDPRVRDYINGEQFAE 101 (318)
T ss_dssp GGEECHHHHHHHTTC-------------TTEEEEECCSSTTSGGGCBCTT----EEECCHHHHHBCSSSSSBCCHHHHHH
T ss_pred CceecHHHHHHhccC-------------CCEEEEECCCChhHHhcCcCCC----CeEeCchhhhccCcccCCCCHHHHHH
Confidence 567999999999865 5799999999987 99999999 44443210 1 12333
Q ss_pred HHHhhhhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 WIDNNAEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~~~~~~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.+ +...++++||+||.+|. |+.+++..|+.. ||+|||.|.|||.+|.++
T Consensus 102 ~l~~-lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~--G~~~V~~L~GG~~~W~~~ 153 (318)
T 3hzu_A 102 LMDR-KGIARDDTVVIYGDKSNWWAAYALWVFTLF--GHADVRLLNGGRDLWLAE 153 (318)
T ss_dssp HHHH-TTCCTTCEEEEECSGGGHHHHHHHHHHHHT--TCSCEEEETTHHHHHHHT
T ss_pred HHHH-cCCCCCCeEEEECCCCCccHHHHHHHHHHc--CCCceEEccCCHHHHhhc
Confidence 3332 23568999999999888 999999999987 999999999999999975
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=7.6e-12 Score=125.28 Aligned_cols=182 Identities=12% Similarity=0.020 Sum_probs=117.7
Q ss_pred CCccEEEEecC---CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHG---FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG---~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++|| ++++...|......|++ .++.++.+|.+..-. . +. .
T Consensus 33 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~~g~g~-----~------------------~~-~--- 82 (277)
T 3bxp_A 33 VDYPIMIICPGGGFTYHSGREEAPIATRMMA---AGMHTVVLNYQLIVG-----D------------------QS-V--- 82 (277)
T ss_dssp CCEEEEEEECCSTTTSCCCTTHHHHHHHHHH---TTCEEEEEECCCSTT-----T------------------CC-C---
T ss_pred CCccEEEEECCCccccCCCccchHHHHHHHH---CCCEEEEEecccCCC-----C------------------Cc-c---
Confidence 45688999999 77888888844434433 479999998761000 0 00 0
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhh------
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERL------ 517 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~------ 517 (608)
+.....++.+++++|.+.....+ ...+|+||||||.+|+.++.+....
T Consensus 83 -----------------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 139 (277)
T 3bxp_A 83 -----------------------YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRY 139 (277)
T ss_dssp -----------------------TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHT
T ss_pred -----------------------CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCccccccc
Confidence 00123456677777777655432 3458999999999999999864321
Q ss_pred ---hCCCCccEEEEecCCCCCc---------------------cccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHH
Q 007311 518 ---KGEIDFRFAILCSGFALHS---------------------AEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573 (608)
Q Consensus 518 ---~~~~~l~~vIlisG~~~~~---------------------~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~ 573 (608)
..+..++++|+++++.... .......+.+|+|++||+ +|.++|.+.++++++.
T Consensus 140 ~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~vp~~~~~~~~~~ 216 (277)
T 3bxp_A 140 HLDHYQGQHAAIILGYPVIDLTAGFPTTSAARNQITTDARLWAAQRLVTPASKPAFVWQTA---TDESVPPINSLKYVQA 216 (277)
T ss_dssp TCTTCCCCCSEEEEESCCCBTTSSSSSSHHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECT---TCCCSCTHHHHHHHHH
T ss_pred CcccccCCcCEEEEeCCcccCCCCCCCccccchhccchhhhcCHhhccccCCCCEEEEeeC---CCCccChHHHHHHHHH
Confidence 0256799999999876311 112344667899999999 8999999999999988
Q ss_pred hccC--CcEEEEeCC-CCcCCCC-----------------hhhHHHHHHHHHHh
Q 007311 574 FEEG--CSVIIEHDC-GHIIPTR-----------------SPYIDEIKSFLQRF 607 (608)
Q Consensus 574 ~~~~--~~~vv~~~g-GH~ip~~-----------------~~~~~~i~~Fl~~~ 607 (608)
+... .++++++++ ||.+... .+.++.+.+||++.
T Consensus 217 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 217 MLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp HHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 8642 356666654 9965332 23467778888653
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.2e-12 Score=129.51 Aligned_cols=177 Identities=16% Similarity=0.149 Sum_probs=113.0
Q ss_pred CccEEEEecCCCCChHH-HHHHHH-HHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQNASS-FKGRTA-SLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~-f~~~~~-~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+++|||+||++.+... |..... .+.+.|...++++.+|.|- .. ...++ ....+.
T Consensus 34 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G--------~G------~s~~~----~~~~~~----- 90 (286)
T 2qmq_A 34 KRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPG--------ME------EGAPV----FPLGYQ----- 90 (286)
T ss_dssp TCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTT--------TS------TTCCC----CCTTCC-----
T ss_pred CCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCC--------CC------CCCCC----CCCCCC-----
Confidence 45789999999999986 653221 1556666679999999881 00 00000 000000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
...++..++.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|
T Consensus 91 -------------------------~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lv 140 (286)
T 2qmq_A 91 -------------------------YPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNH-----PDTVEGLV 140 (286)
T ss_dssp -------------------------CCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHC-----GGGEEEEE
T ss_pred -------------------------ccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhC-----hhheeeEE
Confidence 0135556666666666654 4558999999999999999854 44689999
Q ss_pred EecCCCCCcc----------------------------------c-----------------------------------
Q 007311 528 LCSGFALHSA----------------------------------E----------------------------------- 538 (608)
Q Consensus 528 lisG~~~~~~----------------------------------~----------------------------------- 538 (608)
++++...... .
T Consensus 141 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
T 2qmq_A 141 LINIDPNAKGWMDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFER 220 (286)
T ss_dssp EESCCCCCCCHHHHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEE
T ss_pred EECCCCcccchhhhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhh
Confidence 9998542100 0
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|+++| ...+.+.+..... .++++. ++||.+..+. ...+.|.+||.
T Consensus 221 ~~l~~i~~P~lii~G~---~D~~~~-~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 221 GGETTLKCPVMLVVGD---QAPHED-AVVECNSKLDPTQ-TSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp TTEECCCSCEEEEEET---TSTTHH-HHHHHHHHSCGGG-EEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred chhccCCCCEEEEecC---CCcccc-HHHHHHHHhcCCC-ceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 0123678999999999 899998 4555566665522 566555 5699875432 25566777764
|
| >1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-13 Score=139.55 Aligned_cols=102 Identities=16% Similarity=0.143 Sum_probs=81.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh------------hccccCCCCccccCcccccCCC----
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET------------RIGKFRTPSVETLDPEIRQFSD---- 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~------------~~Gh~~g~~~~~l~~~~~~~~~---- 192 (608)
...++++|+.+++++ ++++|||||++.|| +.|||+| +++.+...+.+
T Consensus 159 ~~~i~~~e~~~~~~~-------------~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpg----A~nip~~~l~~~~~~ 221 (296)
T 1rhs_A 159 SLLKTYEQVLENLES-------------KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRG----SVNMPFMNFLTEDGF 221 (296)
T ss_dssp GGEECHHHHHHHHHH-------------CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETT----CEECCGGGGBCTTSC
T ss_pred ceEEcHHHHHHHhcC-------------CCceEEeCCchhhcccccCCcccCCCcCccCCC----CEeecHHHhcCCCCc
Confidence 467999999999976 47899999999999 8999999 45544332221
Q ss_pred c--hHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 193 L--PTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 ~--~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+ ++.+.+.+ ...++++||+||.+|.||..++..|+.. ||+||+++.||+..|...
T Consensus 222 ~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~--G~~~v~~~~GG~~~W~~~ 281 (296)
T 1rhs_A 222 EKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLC--GKPDVAIYDGSWFEWFHR 281 (296)
T ss_dssp BCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHT--TCCCCEEESSHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHc--CCCCceeeCCcHHHHhcC
Confidence 1 12333222 2468999999999999999999999987 999999999999999874
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-12 Score=130.31 Aligned_cols=60 Identities=22% Similarity=0.406 Sum_probs=45.9
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHhC
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRFL 608 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~L 608 (608)
.+++|+|+|+|+ +| .+++..++++++.+++ .++++. ++||.++.+. .+.+.|.+||.+.|
T Consensus 231 ~i~~P~lii~G~---~D-~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 231 AIKIPTLITVGE---YD-EVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILKHL 293 (293)
T ss_dssp GCCSCEEEEEET---TC-SSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTCC
T ss_pred cCCCCEEEEeeC---CC-CCCHHHHHHHHHhCCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 468999999999 78 6778889999998876 555555 5699865432 36788889988754
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=9.8e-13 Score=138.79 Aligned_cols=176 Identities=16% Similarity=0.174 Sum_probs=119.7
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-----Cc---EEEEecCCccCCccccCCCcccccCCCCCCCCCCCccce
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-----IA---EFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRF 442 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-----~~---~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (608)
.+++|||+||+|++...|. .+.+.|.. ++ +++.+|.|- .. .
T Consensus 51 ~~~~vvllHG~~~~~~~~~----~~~~~L~~~~~~~G~~~~~vi~~D~~G--------~G-------------------~ 99 (398)
T 2y6u_A 51 TRLNLVFLHGSGMSKVVWE----YYLPRLVAADAEGNYAIDKVLLIDQVN--------HG-------------------D 99 (398)
T ss_dssp EEEEEEEECCTTCCGGGGG----GGGGGSCCCBTTTTEEEEEEEEECCTT--------SH-------------------H
T ss_pred CCCeEEEEcCCCCcHHHHH----HHHHHHHHhhhhcCcceeEEEEEcCCC--------CC-------------------C
Confidence 3578999999999999998 66666652 46 999999881 00 0
Q ss_pred eeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC------C-ceEEEecChhHHHHHHHHHHHh
Q 007311 443 AWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG------P-FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 443 ~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~------~-~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.-.... +.. .....+.+.++.+.++++... + ...|+||||||.+|+.+|.+.
T Consensus 100 S~~~~~--------------~~~------~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~- 158 (398)
T 2y6u_A 100 SAVRNR--------------GRL------GTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQ- 158 (398)
T ss_dssp HHHHTT--------------TTB------CSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHC-
T ss_pred CCCCCc--------------ccc------CCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhC-
Confidence 000000 000 001234555566666665422 1 258999999999999999854
Q ss_pred hhhCCCCccEEEEecCCCCCcc-------------------------------------------------c--------
Q 007311 516 RLKGEIDFRFAILCSGFALHSA-------------------------------------------------E-------- 538 (608)
Q Consensus 516 ~~~~~~~l~~vIlisG~~~~~~-------------------------------------------------~-------- 538 (608)
+..++++|++++...... .
T Consensus 159 ----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398)
T 2y6u_A 159 ----PNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQN 234 (398)
T ss_dssp ----TTSCSEEEEESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHH
T ss_pred ----chheeEEEEeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHH
Confidence 557999999987654200 0
Q ss_pred -------------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 539 -------------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 539 -------------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
.....+++|+|+|+|+ +|.++|.+.++++++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~---~D~~~~~~~~~~l~~~~~ 311 (398)
T 2y6u_A 235 IIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGA---RSNWCPPQNQLFLQKTLQ 311 (398)
T ss_dssp HHHHHEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEET---TCCSSCHHHHHHHHHHCS
T ss_pred HHHhcCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcC---CCCCCCHHHHHHHHHhCC
Confidence 0123578999999999 899999999999999987
Q ss_pred cCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHHHh
Q 007311 576 EGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 576 ~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
+ .++++.+ +||.+..+. ...+.|.+||.++
T Consensus 312 ~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 312 N--YHLDVIPGGSHLVNVEAPDLVIERINHHIHEF 344 (398)
T ss_dssp S--EEEEEETTCCTTHHHHSHHHHHHHHHHHHHHH
T ss_pred C--ceEEEeCCCCccchhcCHHHHHHHHHHHHHHH
Confidence 6 5666665 599865432 3677888888764
|
| >1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-13 Score=127.62 Aligned_cols=112 Identities=13% Similarity=0.173 Sum_probs=74.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccc------c--cC-CCchH--HH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEI------R--QF-SDLPT--WI 197 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~------~--~~-~~~~~--~~ 197 (608)
...|+++++.+++++. .++++|||||+..||+.|||+|+.++++.... . .+ ..+|. ..
T Consensus 15 ~~~is~~~l~~~l~~~-----------~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~ 83 (154)
T 1hzm_A 15 AISKTVAWLNEQLELG-----------NERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDR 83 (154)
T ss_dssp SSBSCCCCHHHHHHHC-----------SSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHH
T ss_pred ccccCHHHHHHHHhCC-----------CCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHH
Confidence 4678999999999751 13789999999999999999995433322100 0 00 11221 11
Q ss_pred HhhhhhcCCCeEEEEcCCCccH-------HHHHHHHHhc-CCCCCcEEEcCccHHHHHHhCCC
Q 007311 198 DNNAEQLQGKHVLMYCTGGIRC-------EMASAYVRSK-GAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 198 ~~~~~~~k~k~Iv~yCtgGiR~-------~~a~~~L~~~-~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
+......++++||+||.+|.|+ ..++..|+.. ..||+ |+.|+||+.+|.++++.
T Consensus 84 ~~~~~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~~p~ 145 (154)
T 1hzm_A 84 DRFTRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAEFSL 145 (154)
T ss_dssp HHHHHSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHHHCS
T ss_pred HHHhccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHHChH
Confidence 1112335789999999999886 2323344421 12998 99999999999987664
|
| >1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-13 Score=138.64 Aligned_cols=102 Identities=24% Similarity=0.264 Sum_probs=78.9
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC----------ChhhhhccccCCCCccccCcccccCCC------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR----------NLYETRIGKFRTPSVETLDPEIRQFSD------ 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR----------n~~E~~~Gh~~g~~~~~l~~~~~~~~~------ 192 (608)
...|+++++++++++ ++++||||| +..||..|||+|+ ++.+...+.+
T Consensus 3 ~~~is~~~l~~~l~~-------------~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgA----i~ip~~~l~~~~~~~~ 65 (280)
T 1urh_A 3 TWFVGADWLAEHIDD-------------PEIQIIDARMASPGQEDRNVAQEYLNGHIPGA----VFFDIEALSDHTSPLP 65 (280)
T ss_dssp CCEECHHHHHTTTTC-------------TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTC----EECCGGGGSCSSSSSS
T ss_pred CceeeHHHHHHhcCC-------------CCeEEEEeeccCCcccccchhhhhhhCcCCCC----EECCHHHhcCCCCCCC
Confidence 357899999998864 579999999 7889999999995 4433322221
Q ss_pred --c--hHHHHhh---hhhcCCCeEEEEcCCCcc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 193 --L--PTWIDNN---AEQLQGKHVLMYCTGGIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 --~--~~~~~~~---~~~~k~k~Iv~yCtgGiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+ +..+.+. +...++++||+||.+|.| +.+++..|+.. ||+||+.|.||+.+|.++
T Consensus 66 ~~~~~~~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~--G~~~v~~l~GG~~~W~~~ 128 (280)
T 1urh_A 66 HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTF--GVEKVSILGGGLAGWQRD 128 (280)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHT--TCSCEEEETTHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHc--CCCCEEEecCCHHHHHHC
Confidence 1 1222222 224689999999999999 99999999987 999999999999999874
|
| >3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=126.12 Aligned_cols=113 Identities=10% Similarity=0.210 Sum_probs=75.7
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC------C--Cch--HHH
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF------S--DLP--TWI 197 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~------~--~~~--~~~ 197 (608)
....|+++|+.+++++. +.....+++++|||||++.||+.|||+|+ ++.+...+ . .++ ..+
T Consensus 9 ~~~~is~~el~~~l~~~-----~~~~~~~~~~~liDvR~~~e~~~ghI~ga----~~i~~~~l~~~~~~~~~~~~~~~~~ 79 (158)
T 3tg1_B 9 SIKIIYPNDLAKKMTKC-----SKSHLPSQGPVIIDCRPFMEYNKSHIQGA----VHINCADKISRRRLQQGKITVLDLI 79 (158)
T ss_dssp --CEECHHHHHHHHCC---------------CEEEECSCHHHHHHCCBTTC----EECCCSSHHHHHHHTTSSCCHHHHT
T ss_pred CCcEecHHHHHHHHHhc-----ccccCCCCCEEEEEcCCHHHHHhCCCCCc----eeechhHHHHHhhhhcCcccHHhhc
Confidence 35689999999999630 00000024689999999999999999995 44332211 0 111 001
Q ss_pred H-----hhhhhcCCCeEEEEcCCCc---------cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 198 D-----NNAEQLQGKHVLMYCTGGI---------RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 198 ~-----~~~~~~k~k~Iv~yCtgGi---------R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
. ......++++||+||.+|. |+..++.+|++. || +|+.|+||+.+|.+.+++
T Consensus 80 ~~~~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~--G~-~v~~L~GG~~~W~~~~p~ 145 (158)
T 3tg1_B 80 SCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKRE--GK-EPLVLKGGLSSFKQNHEN 145 (158)
T ss_dssp CCCCSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTT--TC-CEEEETTHHHHHTSSCGG
T ss_pred CCHHHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhC--CC-cEEEeCCcHHHHHHHhhh
Confidence 0 0011125889999999994 599999999987 99 799999999999987764
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.1e-12 Score=132.24 Aligned_cols=119 Identities=16% Similarity=0.149 Sum_probs=85.2
Q ss_pred HHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCC
Q 007311 480 SLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 480 s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D 559 (608)
..+.+..+++..+ ...|+||||||.+|+.+|... +..++++|++++............+++|+|++||+ +|
T Consensus 186 ~~~~l~~l~~~~~-~~~lvGhS~GG~~a~~~a~~~-----p~~v~~~v~~~p~~~~~~~~~~~~~~~PvLii~G~---~D 256 (328)
T 1qlw_A 186 TVANLSKLAIKLD-GTVLLSHSQSGIYPFQTAAMN-----PKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGD---HI 256 (328)
T ss_dssp HHHHHHHHHHHHT-SEEEEEEGGGTTHHHHHHHHC-----CTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECS---SC
T ss_pred HHHHHHHHHHHhC-CceEEEECcccHHHHHHHHhC-----hhheeEEEEeCCCCCCCHHHHhhccCCCEEEEecc---CC
Confidence 3344445555555 458999999999999999843 56799999999654222222234567999999999 89
Q ss_pred cccch-----HHHHHHHHHhcc--CCcEEEEeC-CC-----CcCCCCh---hhHHHHHHHHHHh
Q 007311 560 RQVAN-----QASKELAKAFEE--GCSVIIEHD-CG-----HIIPTRS---PYIDEIKSFLQRF 607 (608)
Q Consensus 560 ~~Vp~-----~~~~~l~~~~~~--~~~~vv~~~-gG-----H~ip~~~---~~~~~i~~Fl~~~ 607 (608)
.++|. +.++++.+.+.. ...+++.++ .| |.+..+. +..+.|.+||++.
T Consensus 257 ~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~ 320 (328)
T 1qlw_A 257 EEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 320 (328)
T ss_dssp TTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred ccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhc
Confidence 99996 889999998873 126666665 34 9875543 3678888888765
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.6e-12 Score=128.38 Aligned_cols=180 Identities=13% Similarity=0.044 Sum_probs=119.5
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeee
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWF 445 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 445 (608)
...+.||++||.| .+...|. .+++.|. .++.++.+|.+-. + ...
T Consensus 48 ~~~p~vv~lHGgg~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~--------~------------------~~~-- 95 (283)
T 3bjr_A 48 TNLPAIIIVPGGSYTHIPVAQAE----SLAMAFAGHGYQAFYLEYTLL--------T------------------DQQ-- 95 (283)
T ss_dssp CCEEEEEEECCSTTTCCCHHHHH----HHHHHHHTTTCEEEEEECCCT--------T------------------TCS--
T ss_pred CCCcEEEEECCCccccCCccccH----HHHHHHHhCCcEEEEEeccCC--------C------------------ccc--
Confidence 4568899999944 5667777 5555554 4699999997720 0 000
Q ss_pred ccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhh-----
Q 007311 446 VAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERL----- 517 (608)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~----- 517 (608)
. .+.....++.+++++|.+.....+ ...+|+||||||.+|+.++.+.+..
T Consensus 96 ~----------------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 153 (283)
T 3bjr_A 96 P----------------------LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATEL 153 (283)
T ss_dssp S----------------------CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHH
T ss_pred c----------------------CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhc
Confidence 0 000123456677777776654432 3457999999999999999865311
Q ss_pred ---hCCCCccEEEEecCCCCCc---------------------cccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHH
Q 007311 518 ---KGEIDFRFAILCSGFALHS---------------------AEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573 (608)
Q Consensus 518 ---~~~~~l~~vIlisG~~~~~---------------------~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~ 573 (608)
.....++++|++++..... .......+.+|+|+++|+ +|.++|.+.++++++.
T Consensus 154 ~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~~p~~~~~~~~~~ 230 (283)
T 3bjr_A 154 NVTPAMLKPNNVVLGYPVISPLLGFPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTA---DDPIVPATNTLAYATA 230 (283)
T ss_dssp TCCHHHHCCSSEEEESCCCCTTSBC--------CCCCCGGGGCGGGSCCTTCCCEEEEEES---CCTTSCTHHHHHHHHH
T ss_pred CCCcCCCCccEEEEcCCccccccccccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcC---CCCCCChHHHHHHHHH
Confidence 0012378899998876321 112345678999999999 8999999999999998
Q ss_pred hccC--CcEEEEeC-CCCcCCCC---------------hhhHHHHHHHHHH
Q 007311 574 FEEG--CSVIIEHD-CGHIIPTR---------------SPYIDEIKSFLQR 606 (608)
Q Consensus 574 ~~~~--~~~vv~~~-gGH~ip~~---------------~~~~~~i~~Fl~~ 606 (608)
+... ..++++++ +||.+... ...++.+.+||++
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLAD 281 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHH
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhh
Confidence 8753 24666665 59964321 3467888888875
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.8e-12 Score=125.85 Aligned_cols=174 Identities=11% Similarity=0.052 Sum_probs=112.8
Q ss_pred CCccEEEEecCCC-----CChHHHHHHHHHHHHHc-----cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCc
Q 007311 370 RRKLRILCLHGFR-----QNASSFKGRTASLAKKL-----KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCK 439 (608)
Q Consensus 370 ~~~~~iLlLHG~G-----~na~~f~~~~~~L~~~L-----~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (608)
..+++||++||.| .+...|. .+.+.| ..++.++.+|.+.. +
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~~----~~~~~L~~~a~~~g~~vi~~d~r~~-~------------------------ 89 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDFN----QLANTIKSMDTESTVCQYSIEYRLS-P------------------------ 89 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGH----HHHHHHHHHCTTCCEEEEEECCCCT-T------------------------
T ss_pred CCCeEEEEECCCcccCCcCChHHHH----HHHHHHhhhhccCCcEEEEeecccC-C------------------------
Confidence 4567899999955 4677888 566666 56899999986510 0
Q ss_pred cceeeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhh-
Q 007311 440 KRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLK- 518 (608)
Q Consensus 440 ~~~~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~- 518 (608)
...+ ....+++.+.++++.+.+ ......|+||||||.+|+.++.+.....
T Consensus 90 -~~~~--------------------------~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~GG~~a~~~a~~~~~~~p 140 (273)
T 1vkh_A 90 -EITN--------------------------PRNLYDAVSNITRLVKEK--GLTNINMVGHSVGATFIWQILAALKDPQE 140 (273)
T ss_dssp -TSCT--------------------------THHHHHHHHHHHHHHHHH--TCCCEEEEEETHHHHHHHHHHTGGGSCTT
T ss_pred -CCCC--------------------------CcHHHHHHHHHHHHHHhC--CcCcEEEEEeCHHHHHHHHHHHHhccCCc
Confidence 0000 011234455555554443 2345689999999999999998642100
Q ss_pred -----------CCCCccEEEEecCCCCCccc-------------------c---------------ccCCCCCCEEEEEc
Q 007311 519 -----------GEIDFRFAILCSGFALHSAE-------------------F---------------EHRSINCPSLHIFG 553 (608)
Q Consensus 519 -----------~~~~l~~vIlisG~~~~~~~-------------------~---------------~~~~i~~PvL~i~G 553 (608)
.+..++++|+++++.+.... . ....+.+|+|++||
T Consensus 141 ~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G 220 (273)
T 1vkh_A 141 KMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHS 220 (273)
T ss_dssp TCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred cccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHHHHhcccccchhhcccccChhhhhcccccCCCEEEEec
Confidence 13568999999987643210 0 01117899999999
Q ss_pred CCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCChhhHHHHHHHHHHh
Q 007311 554 GDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 554 ~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
+ +|.++|.+.++++++.+... ..++++++ +||...... +++.+.+.+|
T Consensus 221 ~---~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~i~~f 271 (273)
T 1vkh_A 221 Y---SDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN---GKVAKYIFDN 271 (273)
T ss_dssp T---TCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC---HHHHHHHHHT
T ss_pred C---CcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC---hHHHHHHHHH
Confidence 9 89999999999999988752 25555555 699865432 4444444444
|
| >3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.8e-13 Score=137.79 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=80.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-----------hccccCCCCccccCcccccCCC----c
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-----------RIGKFRTPSVETLDPEIRQFSD----L 193 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-----------~~Gh~~g~~~~~l~~~~~~~~~----~ 193 (608)
...++++|+.+++++ ++++|||||++.|| +.|||+|+ ++.+...+.+ +
T Consensus 174 ~~~i~~~e~~~~~~~-------------~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGA----iniP~~~l~~~~~~~ 236 (302)
T 3olh_A 174 AFIKTYEDIKENLES-------------RRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGT----VNIPFTDFLSQEGLE 236 (302)
T ss_dssp GGEECHHHHHHHHHH-------------CCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTC----EECCGGGGBCSSSCB
T ss_pred cceecHHHHHHhhcC-------------CCcEEEecCCHHHccccccCCCcCCcCccCCCc----eecCHHHhcCCCCcc
Confidence 457899999999976 47899999999999 89999994 4443322211 1
Q ss_pred --hHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 194 --PTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 194 --~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.+.+.+ ...++++||+||.+|.||..++..|+.. ||+||+++.||+..|.+.
T Consensus 237 ~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~--G~~~v~~~~Gg~~~W~~~ 295 (302)
T 3olh_A 237 KSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLC--GKPDVPIYDGSWVEWYMR 295 (302)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTT--TCCCCCEESSHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHc--CCCCeeEeCCcHHHHhhc
Confidence 12222222 3568899999999999999999999986 999999999999999876
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.38 E-value=7.4e-12 Score=125.75 Aligned_cols=199 Identities=16% Similarity=0.129 Sum_probs=118.5
Q ss_pred CCccEEEEecCCCCChHHHHHH--HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGR--TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~--~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.||+|||+|.+...|... +..+... .++.++.+|.+..-.- . .+ ...-..+.+..|+..
T Consensus 45 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~--~g~~vv~pd~~~~g~~---------~-~~---~~~~~~G~g~~~~~~ 109 (280)
T 3i6y_A 45 AKVPVLYWLSGLTCSDENFMQKAGAQRLAAE--LGIAIVAPDTSPRGEG---------V-AD---DEGYDLGQGAGFYVN 109 (280)
T ss_dssp CCEEEEEEECCTTCCSSHHHHHSCCHHHHHH--HTCEEEEECSSCCSTT---------C-CC---CSSTTSSTTCCTTCB
T ss_pred CCccEEEEecCCCCChhHHhhcccHHHHHhh--CCeEEEEeCCcccccc---------c-Cc---ccccccccCcccccc
Confidence 4568999999999999988754 3333332 2688999987621100 0 00 000000001112110
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
.. -++. .......+...+.+...+++.. ...+|+||||||.+|+.++.+. +..++
T Consensus 110 ~~---------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~ 167 (280)
T 3i6y_A 110 AT---------------QAPW--NRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRN-----PERYQ 167 (280)
T ss_dssp CC---------------STTG--GGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHC-----TTTCS
T ss_pred cc---------------CCCc--cchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhC-----Ccccc
Confidence 00 0000 0001112222334444454332 3457999999999999999854 56799
Q ss_pred EEEEecCCCCCccc------------------------cccCCC--CCCEEEEEcCCCCCCcccchHH-HHHHHHHhccC
Q 007311 525 FAILCSGFALHSAE------------------------FEHRSI--NCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEG 577 (608)
Q Consensus 525 ~vIlisG~~~~~~~------------------------~~~~~i--~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~ 577 (608)
++|++++...+... .....+ .+|+|++||+ +|.+++.+. ++++++.+...
T Consensus 168 ~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~---~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3i6y_A 168 SVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGE---ADNFLAEQLKPEVLEAAASSN 244 (280)
T ss_dssp CEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEET---TCTTHHHHTCHHHHHHHHHHT
T ss_pred EEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeC---CCccccchhhHHHHHHHHHHc
Confidence 99999997643210 011122 5899999999 899998754 67777777642
Q ss_pred --CcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 578 --CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 578 --~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
.++++++++ ||.+......++++.+|+.++|
T Consensus 245 g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~~l 278 (280)
T 3i6y_A 245 NYPLELRSHEGYDHSYYFIASFIEDHLRFHSNYL 278 (280)
T ss_dssp TCCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCccHHHHHHhHHHHHHHHHhhc
Confidence 356777776 9987555567888899988764
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.38 E-value=2.8e-12 Score=133.91 Aligned_cols=184 Identities=14% Similarity=0.076 Sum_probs=120.1
Q ss_pred ccEEEEecCCCCChHH---------HHHHHHHHHH---Hc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCC
Q 007311 372 KLRILCLHGFRQNASS---------FKGRTASLAK---KL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENC 438 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~---------f~~~~~~L~~---~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~ 438 (608)
.+.||||||++++... |. .+.. .| ..+++++.+|.|-. .. ....+....+
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~----~~~~~~~~L~~~g~~vi~~D~~G~-------~g------~s~~~~~~~~ 121 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQ----NFMGAGLALDTDRYFFISSNVLGG-------CK------GTTGPSSINP 121 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTG----GGEETTSSEETTTCEEEEECCTTC-------SS------SSSCTTSBCT
T ss_pred CCeEEEeCCCCCccccccccccchhhh----hccCcccccccCCceEEEecCCCC-------CC------CCCCCcccCc
Confidence 4789999999999998 87 5543 46 57899999998810 00 0000000000
Q ss_pred ccceeeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceE-EEecChhHHHHHHHHHHHhh
Q 007311 439 KKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDG-ILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 439 ~~~~~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~-IlGFSQGa~vAl~la~~~~~ 516 (608)
..+..|.. .| ....+.+.++.+..+++..+ .... |+||||||++|+.+|.+.
T Consensus 122 ~~g~~~~~-----------------~~-------~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~-- 175 (377)
T 2b61_A 122 QTGKPYGS-----------------QF-------PNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDY-- 175 (377)
T ss_dssp TTSSBCGG-----------------GC-------CCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHS--
T ss_pred cccccccc-----------------cC-------CcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHC--
Confidence 00011100 00 01246666777777777654 3445 999999999999999854
Q ss_pred hhCCCCccEEEEecCCCCCcc-----------------------------------------------------------
Q 007311 517 LKGEIDFRFAILCSGFALHSA----------------------------------------------------------- 537 (608)
Q Consensus 517 ~~~~~~l~~vIlisG~~~~~~----------------------------------------------------------- 537 (608)
+..++++|++++......
T Consensus 176 ---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T 2b61_A 176 ---PDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRAT 252 (377)
T ss_dssp ---TTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCB
T ss_pred ---chhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhcccc
Confidence 567999999987432100
Q ss_pred ----------------------------------------------------ccccCCCCCCEEEEEcCCCCCCcccch-
Q 007311 538 ----------------------------------------------------EFEHRSINCPSLHIFGGDLGNDRQVAN- 564 (608)
Q Consensus 538 ----------------------------------------------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~- 564 (608)
......+++|+|+|+|+ +|.++|.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~---~D~~~~~~ 329 (377)
T 2b61_A 253 KSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVT---TDQLFKPI 329 (377)
T ss_dssp CTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEET---TCSSSCHH
T ss_pred ccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecC---CcccCCcc
Confidence 00124678999999999 8999999
Q ss_pred ---HHHHHHHHHhccCCcEEEEeC--CCCcCCCC--hhhHHHHHHHHHH
Q 007311 565 ---QASKELAKAFEEGCSVIIEHD--CGHIIPTR--SPYIDEIKSFLQR 606 (608)
Q Consensus 565 ---~~~~~l~~~~~~~~~~vv~~~--gGH~ip~~--~~~~~~i~~Fl~~ 606 (608)
+.++++++.+++ .++++.+ +||.+..+ ....+.|.+||.+
T Consensus 330 ~~~~~~~~l~~~~~~--~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 330 DLYKSKQLLEQSGVD--LHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHHHHTTCE--EEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHhcCCC--ceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 888888888876 5665554 79987542 2367778888864
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.8e-12 Score=131.29 Aligned_cols=172 Identities=15% Similarity=0.180 Sum_probs=116.2
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCCc
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGK 453 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 453 (608)
.||||||++++...|..++..|.+. .++++|.+|.| ... ...+.. .
T Consensus 56 plvllHG~~~~~~~w~~~~~~l~~~--~~~~Via~D~r--------G~G------------------~S~~~~--~---- 101 (330)
T 3nwo_A 56 PLIVLHGGPGMAHNYVANIAALADE--TGRTVIHYDQV--------GCG------------------NSTHLP--D---- 101 (330)
T ss_dssp CEEEECCTTTCCSGGGGGGGGHHHH--HTCCEEEECCT--------TST------------------TSCCCT--T----
T ss_pred cEEEECCCCCCchhHHHHHHHhccc--cCcEEEEECCC--------CCC------------------CCCCCC--C----
Confidence 5999999999999998776666531 26899999988 110 000000 0
Q ss_pred cccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 454 RETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 454 ~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.+ .....++..++.|.++++..+ ....|+||||||++|+.+|.+ .+..+.++|++++.
T Consensus 102 -----------~~-----~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~-----~P~~v~~lvl~~~~ 160 (330)
T 3nwo_A 102 -----------AP-----ADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVR-----QPSGLVSLAICNSP 160 (330)
T ss_dssp -----------SC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHT-----CCTTEEEEEEESCC
T ss_pred -----------Cc-----cccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHh-----CCccceEEEEecCC
Confidence 00 001235556666777777765 455899999999999999994 36678999988764
Q ss_pred CCCc-----------------------------------------------------c----------------------
Q 007311 533 ALHS-----------------------------------------------------A---------------------- 537 (608)
Q Consensus 533 ~~~~-----------------------------------------------------~---------------------- 537 (608)
.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (330)
T 3nwo_A 161 ASMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNG 240 (330)
T ss_dssp SBHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTC
T ss_pred cchHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccC
Confidence 3100 0
Q ss_pred ---------------ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHH
Q 007311 538 ---------------EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDE 599 (608)
Q Consensus 538 ---------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~ 599 (608)
......|++|+|+|+|+ +|.++| ..++++.+.+++ .++++. ++||.++.+.+ +.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~---~D~~~p-~~~~~~~~~ip~--~~~~~i~~~gH~~~~e~p~~~~~~ 314 (330)
T 3nwo_A 241 PNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGE---HDEATP-KTWQPFVDHIPD--VRSHVFPGTSHCTHLEKPEEFRAV 314 (330)
T ss_dssp SCSSSCCSGGGGCBCGGGGGGCCSCEEEEEET---TCSSCH-HHHHHHHHHCSS--EEEEEETTCCTTHHHHSHHHHHHH
T ss_pred chhhhhhccccCCchhhhcccCCCCeEEEeeC---CCccCh-HHHHHHHHhCCC--CcEEEeCCCCCchhhcCHHHHHHH
Confidence 00123578999999999 899876 467888888876 555555 56998766433 6788
Q ss_pred HHHHHHH
Q 007311 600 IKSFLQR 606 (608)
Q Consensus 600 i~~Fl~~ 606 (608)
|.+||.+
T Consensus 315 i~~FL~~ 321 (330)
T 3nwo_A 315 VAQFLHQ 321 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888865
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.37 E-value=9.4e-12 Score=129.30 Aligned_cols=171 Identities=13% Similarity=0.181 Sum_probs=121.6
Q ss_pred CccEEEEecCC--CCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGF--RQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~--G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+++||||||+ +++...|. .+.+.|...++++.+|.|- +. ...
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~----~~~~~L~~~~~v~~~d~~G-----------------------------~G--~~~ 124 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYS----RLAEELDAGRRVSALVPPG-----------------------------FH--GGQ 124 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGH----HHHHHHCTTSEEEEEECTT-----------------------------SS--TTC
T ss_pred CCCeEEEECCCCcCCCHHHHH----HHHHHhCCCceEEEeeCCC-----------------------------CC--CCC
Confidence 45789999995 77889999 8888888889999999881 00 000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-C-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-G-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....++...++.+.+.+... + ....|+|||+||.+|+.+|.+.+. .+..++++
T Consensus 125 -----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~--~~~~v~~l 179 (319)
T 3lcr_A 125 -----------------------ALPATLTVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEA--RGLAPRGV 179 (319)
T ss_dssp -----------------------CEESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHH--TTCCCSCE
T ss_pred -----------------------CCCCCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHh--cCCCccEE
Confidence 00123555555565655543 2 344899999999999999987652 24678999
Q ss_pred EEecCCCCCcc--c-----------------------------------------cccCCCCCCEEEEEcCCCCCCcccc
Q 007311 527 ILCSGFALHSA--E-----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 527 IlisG~~~~~~--~-----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp 563 (608)
|+++++.+... . .....+++|+|+|+|+ |+.++
T Consensus 180 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~----~~~~~ 255 (319)
T 3lcr_A 180 VLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPA----QPLVE 255 (319)
T ss_dssp EEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEES----SCSSS
T ss_pred EEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeC----CCCCC
Confidence 99998776432 0 0124789999999998 46777
Q ss_pred hHHHHHHHHHhccCCcEEEEeCCCCcCCCC----hhhHHHHHHHHHH
Q 007311 564 NQASKELAKAFEEGCSVIIEHDCGHIIPTR----SPYIDEIKSFLQR 606 (608)
Q Consensus 564 ~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~----~~~~~~i~~Fl~~ 606 (608)
......+.+.+... ..++..++||+.... ....+.|.+||.+
T Consensus 256 ~~~~~~~~~~~~~~-~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~ 301 (319)
T 3lcr_A 256 QEKPEWRGDVLAAM-GQVVEAPGDHFTIIEGEHVASTAHIVGDWLRE 301 (319)
T ss_dssp CCCTHHHHHHHHTC-SEEEEESSCTTGGGSTTTHHHHHHHHHHHHHH
T ss_pred cccchhhhhcCCCC-ceEEEeCCCcHHhhCcccHHHHHHHHHHHHHh
Confidence 77778888877754 777788889986554 2356777778764
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=5.7e-12 Score=131.85 Aligned_cols=60 Identities=20% Similarity=0.157 Sum_probs=46.7
Q ss_pred CCCCCCEEEEEcCCCCCCcccch--HHHHHHHHHhccCCc-EEEEeC-CCCcCCCCh--hhHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVAN--QASKELAKAFEEGCS-VIIEHD-CGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~--~~~~~l~~~~~~~~~-~vv~~~-gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
..+++|+|+|+|+ +|.++|. +.++++++.+++ . ++++.+ +||.++.+. .+.+.|.+||.+
T Consensus 288 ~~i~~PvLii~G~---~D~~~p~~~~~~~~l~~~~p~--~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~ 353 (356)
T 2e3j_A 288 KPLTPPALFIGGQ---YDVGTIWGAQAIERAHEVMPN--YRGTHMIADVGHWIQQEAPEETNRLLLDFLGG 353 (356)
T ss_dssp SCCCSCEEEEEET---TCHHHHHTHHHHHTHHHHCTT--EEEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CccCCCEEEEecC---CCccccccHHHHHHHHHhCcC--cceEEEecCcCcccchhCHHHHHHHHHHHHhh
Confidence 4688999999999 8999995 888999998876 4 555554 699976542 366778888864
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-12 Score=134.29 Aligned_cols=62 Identities=16% Similarity=0.100 Sum_probs=47.7
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCC---C-h-hhHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPT---R-S-PYIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~---~-~-~~~~~i~~Fl~~ 606 (608)
...+++|+|+++|+ +|.++|.+.++++++.+++. ..+++. ++||.... + + ...+.|.+||++
T Consensus 309 l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 309 LTDMHVPIAVWNGG---NDLLADPHDVDLLLSKLPNL-IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp GGGCCSCEEEEEET---TCSSSCHHHHHHHHTTCTTE-EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HhhCCCCEEEEEeC---CCcccCHHHHHHHHHhCcCc-ccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 34678999999999 89999999999999998763 324444 67998652 2 2 367888899875
|
| >3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A | Back alignment and structure |
|---|
Probab=99.36 E-value=4.1e-13 Score=136.83 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=76.8
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCC-hhhhhccccCCCCccccCcccccC-C-----------CchHH
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARN-LYETRIGKFRTPSVETLDPEIRQF-S-----------DLPTW 196 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn-~~E~~~Gh~~g~~~~~l~~~~~~~-~-----------~~~~~ 196 (608)
..|+++++.+++++ ++++|||||+ ..||+.|||+|+ ++.+...+ . +|..+
T Consensus 6 ~~is~~~l~~~l~~-------------~~~~liDvR~~~~ey~~ghIpgA----~~ip~~~~~~~~~~~~~~~~~~~~~~ 68 (277)
T 3aay_A 6 VLVSADWAESNLHA-------------PKVVFVEVDEDTSAYDRDHIAGA----IKLDWRTDLQDPVKRDFVDAQQFSKL 68 (277)
T ss_dssp HEECHHHHHTTTTC-------------TTEEEEEEESSSHHHHHCBSTTC----EEEETTTTTBCSSSSSBCCHHHHHHH
T ss_pred ceEcHHHHHHHhCC-------------CCEEEEEcCCChhhHhhCCCCCc----EEecccccccCCCCCCCCCHHHHHHH
Confidence 46899999998864 4789999999 899999999995 44332211 0 12222
Q ss_pred HHhhhhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 197 IDNNAEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 197 ~~~~~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+.. +...++++||+||.+|. |+.+|+..|+.. ||+||+.|.||+.+|.++
T Consensus 69 ~~~-~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~--G~~~v~~l~GG~~~W~~~ 119 (277)
T 3aay_A 69 LSE-RGIANEDTVILYGGNNNWFAAYAYWYFKLY--GHEKVKLLDGGRKKWELD 119 (277)
T ss_dssp HHH-HTCCTTSEEEEECSGGGHHHHHHHHHHHHT--TCCSEEEETTHHHHHHHT
T ss_pred HHH-cCCCCCCeEEEECCCCCchHHHHHHHHHHc--CCCcEEEecCCHHHHHHc
Confidence 222 22468999999999875 688999999987 999999999999999875
|
| >1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-13 Score=139.90 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=78.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC-ChhhhhccccCCCCccccCccccc-CC-----------CchH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR-NLYETRIGKFRTPSVETLDPEIRQ-FS-----------DLPT 195 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR-n~~E~~~Gh~~g~~~~~l~~~~~~-~~-----------~~~~ 195 (608)
...|+++++++++++ ++++||||| ++.||+.|||+|+ ++.+... ++ +|..
T Consensus 7 ~~~is~~~l~~~l~~-------------~~~~liDvR~~~~e~~~ghIpgA----~~ip~~~~~~~~~~~~~~~~~~~~~ 69 (285)
T 1uar_A 7 EVLVSTDWVQEHLED-------------PKVRVLEVDEDILLYDTGHIPGA----QKIDWQRDFWDPVVRDFISEEEFAK 69 (285)
T ss_dssp GGEECHHHHHTTTTC-------------TTEEEEEECSSTTHHHHCBCTTC----EEECHHHHHBCSSSSSBCCHHHHHH
T ss_pred CceEcHHHHHHhcCC-------------CCEEEEEcCCCcchhhcCcCCCC----EECCchhhccCCcccCCCCHHHHHH
Confidence 467999999998864 479999999 7899999999994 4433221 10 1333
Q ss_pred HHHhhhhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 WIDNNAEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~~~~~~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.. +...++++||+||.+|. |+.+|+..|+.. ||+||+.|.||+.+|.++
T Consensus 70 ~~~~-~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~--G~~~v~~l~GG~~~W~~~ 121 (285)
T 1uar_A 70 LMER-LGISNDTTVVLYGDKNNWWAAYAFWFFKYN--GHKDVRLMNGGRQKWVEE 121 (285)
T ss_dssp HHHH-TTCCTTCEEEEECHHHHHHHHHHHHHHHHT--TCSCEEEETTHHHHHHHH
T ss_pred HHHH-cCCCCCCeEEEECCCCCccHHHHHHHHHHc--CCCCeEEecCCHHHHHHC
Confidence 3322 22468999999999998 799999999987 999999999999999875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=140.58 Aligned_cols=173 Identities=14% Similarity=0.090 Sum_probs=118.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++||++||++++...|. .+.+.|.. +++++.+|.|- .. . ....
T Consensus 257 ~~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~D~~G--------~G------~-------------S~~~--- 302 (555)
T 3i28_A 257 SGPAVCLCHGFPESWYSWR----YQIPALAQAGYRVLAMDMKG--------YG------E-------------SSAP--- 302 (555)
T ss_dssp SSSEEEEECCTTCCGGGGT----THHHHHHHTTCEEEEECCTT--------ST------T-------------SCCC---
T ss_pred CCCEEEEEeCCCCchhHHH----HHHHHHHhCCCEEEEecCCC--------CC------C-------------CCCC---
Confidence 3578999999999999998 44455543 69999999881 10 0 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.+ .....+....+.+.++++..+ ...+|+|||+||.+|+.+|.+. +..++++|+
T Consensus 303 ---------------~~-----~~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl 357 (555)
T 3i28_A 303 ---------------PE-----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFY-----PERVRAVAS 357 (555)
T ss_dssp ---------------SC-----GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred ---------------CC-----cccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhC-----hHheeEEEE
Confidence 00 001235555666666666654 4558999999999999999854 456899999
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++.......
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (555)
T 3i28_A 358 LNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPS 437 (555)
T ss_dssp ESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCC
T ss_pred EccCCCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccc
Confidence 8864321100
Q ss_pred -----------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC
Q 007311 539 -----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG 577 (608)
Q Consensus 539 -----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~ 577 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~---~D~~~~~~~~~~~~~~~~~- 513 (555)
T 3i28_A 438 LSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAE---KDFVLVPQMSQHMEDWIPH- 513 (555)
T ss_dssp CCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEET---TCSSSCGGGGTTGGGTCTT-
T ss_pred cccccCHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeC---CCCCcCHHHHHHHHhhCCC-
Confidence 0013788999999999 8999999999999988876
Q ss_pred CcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHh
Q 007311 578 CSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 578 ~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
.++++. ++||.+..+. ...+.|.+||.+.
T Consensus 514 -~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 545 (555)
T 3i28_A 514 -LKRGHIEDCGHWTQMDKPTEVNQILIKWLDSD 545 (555)
T ss_dssp -CEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred -ceEEEeCCCCCCcchhCHHHHHHHHHHHHHhc
Confidence 555555 5699865432 3667888888753
|
| >1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=9.3e-13 Score=146.92 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=82.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
-+.|+++++.+++++. ++++|||||+..||+.|||+| +++.+. .+|..++.. +...++++
T Consensus 6 ~~~is~~~l~~~l~~~------------~~~~liDvR~~~e~~~ghIpg----Av~ip~---~~~~~~~~~-l~~~~~~~ 65 (539)
T 1yt8_A 6 IAVRTFHDIRAALLAR------------RELALLDVREEDPFAQAHPLF----AANLPL---SRLELEIHA-RVPRRDTP 65 (539)
T ss_dssp CEEECHHHHHHHHHHT------------CCBEEEECSCHHHHTTSBCTT----CEECCG---GGHHHHHHH-HSCCTTSC
T ss_pred CcccCHHHHHHHHhCC------------CCeEEEECCCHHHHhcCcCCC----CEECCH---HHHHHHHHh-hCCCCCCe
Confidence 3579999999999763 579999999999999999999 565553 345555543 22257899
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.|+.+|+..|+.. ||+|||.|.||+.+|.++
T Consensus 66 iVvyc~~g~~s~~a~~~L~~~--G~~~V~~L~GG~~~W~~~ 104 (539)
T 1yt8_A 66 ITVYDDGEGLAPVAAQRLHDL--GYSDVALLDGGLSGWRNA 104 (539)
T ss_dssp EEEECSSSSHHHHHHHHHHHT--TCSSEEEETTHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHc--CCCceEEeCCCHHHHHhc
Confidence 999999999999999999997 999999999999999875
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=8.8e-12 Score=124.81 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=115.8
Q ss_pred CCccEEEEecCCCCChHHHHHHH---HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNASSFKGRT---ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~---~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
.+.|.||+|||+|.+...|.... ..+.+ .++.++.+|.+.. +. + .......|..
T Consensus 43 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~---~g~~vv~~d~~~r-------G~--~-----------~~~~~~~~~~ 99 (282)
T 3fcx_A 43 GKCPALYWLSGLTCTEQNFISKSGYHQSASE---HGLVVIAPDTSPR-------GC--N-----------IKGEDESWDF 99 (282)
T ss_dssp SCEEEEEEECCTTCCSHHHHHHSCCHHHHHH---HTCEEEEECSCSS-------CC--C-----------C--------C
T ss_pred CCCCEEEEEcCCCCCccchhhcchHHHHhhc---CCeEEEEeccccC-------cc--c-----------cccccccccc
Confidence 45689999999999999887542 22322 3789999997411 00 0 0001112211
Q ss_pred cCCCCCcccccc-ccCCCCCCCcccccccccHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhhhCCC
Q 007311 447 APDFSGKRETNW-KLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERLKGEI 521 (608)
Q Consensus 447 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~~~~~ 521 (608)
... ..| .... .. .+...........+.+...+.+.- ...+|+||||||.+|+.++.+ .+.
T Consensus 100 g~~------~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-----~p~ 164 (282)
T 3fcx_A 100 GTG------AGFYVDAT--ED--PWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALK-----NPG 164 (282)
T ss_dssp CCC------CCTTCBCC--ST--THHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHT-----STT
T ss_pred cCC------cccccccC--cc--cccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHh-----Ccc
Confidence 000 000 0000 00 000111223333444555555322 345799999999999999984 356
Q ss_pred CccEEEEecCCCCCccc---------------------------cccCCCCCCEEEEEcCCCCCCcccchHH--HHHHHH
Q 007311 522 DFRFAILCSGFALHSAE---------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA--SKELAK 572 (608)
Q Consensus 522 ~l~~vIlisG~~~~~~~---------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~--~~~l~~ 572 (608)
.++++|++++...+... .....+.+|+|++||+ +|.++|... ++++.+
T Consensus 165 ~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~---~D~~v~~~~~~~~~~~~ 241 (282)
T 3fcx_A 165 KYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGK---DDQFLLDGQLLPDNFIA 241 (282)
T ss_dssp TSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEET---TCHHHHTTSSCHHHHHH
T ss_pred cceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCC---CCcccccchhhHHHHHH
Confidence 78999999997643210 1223458999999999 899986544 445665
Q ss_pred HhccC--CcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 573 AFEEG--CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 573 ~~~~~--~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
.+... .++++++++ ||.++.-...+.+..+|+.++|
T Consensus 242 ~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~l 280 (282)
T 3fcx_A 242 ACTEKKIPVVFRLQEDYDHSYYFIATFITDHIRHHAKYL 280 (282)
T ss_dssp HHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCceEEEECCCCCcCHHHHHhhhHHHHHHHHHhh
Confidence 55532 357777776 9998666678888899998876
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.36 E-value=5e-12 Score=126.34 Aligned_cols=163 Identities=13% Similarity=0.217 Sum_probs=105.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++|||+||++.++..|. .+.+.|. .+++++.+|.| .+. . + ....
T Consensus 16 ~~~vvllHG~~~~~~~w~----~~~~~L~~~~~~vi~~Dl~--------GhG------~-------S-----~~~~---- 61 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADWQ----PVLSHLARTQCAALTLDLP--------GHG------T-------N-----PERH---- 61 (264)
T ss_dssp BCEEEEECCTTCCGGGGH----HHHHHHTTSSCEEEEECCT--------TCS------S-------C-----C-------
T ss_pred CCcEEEEcCCCCCHHHHH----HHHHHhcccCceEEEecCC--------CCC------C-------C-----CCCC----
Confidence 468999999999999999 6677776 68999999988 110 0 0 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-Cc--eEEEecChhHHHHHH---HHHHHhhhhCCCCcc
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PF--DGILGFSQGAAMAAS---VCAQWERLKGEIDFR 524 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~--~~IlGFSQGa~vAl~---la~~~~~~~~~~~l~ 524 (608)
..++++..+.+.++++..+ .. ..|+||||||++|+. +|.+ .+..++
T Consensus 62 -----------------------~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~-----~p~~v~ 113 (264)
T 1r3d_A 62 -----------------------CDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAF-----SRLNLR 113 (264)
T ss_dssp ---------------------------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTT-----TTSEEE
T ss_pred -----------------------ccCHHHHHHHHHHHHHHhCcCCCceEEEEECHhHHHHHHHHHHHhh-----Cccccc
Confidence 0123445566667776654 22 589999999999999 5552 356789
Q ss_pred EEEEecCCCCCc-------------------------------------cc-----------------------------
Q 007311 525 FAILCSGFALHS-------------------------------------AE----------------------------- 538 (608)
Q Consensus 525 ~vIlisG~~~~~-------------------------------------~~----------------------------- 538 (608)
++|++++..... ..
T Consensus 114 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (264)
T 1r3d_A 114 GAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATS 193 (264)
T ss_dssp EEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTC
T ss_pred eEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhh
Confidence 999987532100 00
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHh
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
.....+++|+|+|+|+ +|..++ .+.+.+. ..+++. ++||.++.+. .+.+.|.+||.+.
T Consensus 194 ~~~~~~~~~~l~~i~~P~lii~G~---~D~~~~-----~~~~~~~---~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 194 LAKQPYLLPALQALKLPIHYVCGE---QDSKFQ-----QLAESSG---LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp GGGCCCCHHHHHTCSSCEEEEEET---TCHHHH-----HHHHHHC---SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred hccCccHHHHHHhcCCCEEEEEEC---CCchHH-----HHHHHhC---CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 0013578999999999 898653 2333333 334444 5799976542 3678888888764
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.36 E-value=8.2e-12 Score=133.72 Aligned_cols=177 Identities=12% Similarity=0.140 Sum_probs=114.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+.++||++||++++...|...+.. ..+..++.++.+|.|- .. .+. ....
T Consensus 158 ~~p~vv~~HG~~~~~~~~~~~~~~--~~~~~g~~vi~~D~~G--------~G-------------~s~--~~~~------ 206 (405)
T 3fnb_A 158 AQDTLIVVGGGDTSREDLFYMLGY--SGWEHDYNVLMVDLPG--------QG-------------KNP--NQGL------ 206 (405)
T ss_dssp CCCEEEEECCSSCCHHHHHHHTHH--HHHHTTCEEEEECCTT--------ST-------------TGG--GGTC------
T ss_pred CCCEEEEECCCCCCHHHHHHHHHH--HHHhCCcEEEEEcCCC--------Cc-------------CCC--CCCC------
Confidence 347899999999999998733321 2335689999999881 10 000 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.+ ..++.+.+..+.+.+.......+|+|||+||.+|+.++.. .+ .++++|+++
T Consensus 207 -------------~~--------~~~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~-----~p-~v~~~v~~~ 259 (405)
T 3fnb_A 207 -------------HF--------EVDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEK-----DK-RIKAWIAST 259 (405)
T ss_dssp -------------CC--------CSCTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTT-----CT-TCCEEEEES
T ss_pred -------------CC--------CccHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhc-----Cc-CeEEEEEec
Confidence 00 0111222233333333332456899999999999999873 23 799999999
Q ss_pred CCCCCccc-----------------------------------------------------------cccCCCCCCEEEE
Q 007311 531 GFALHSAE-----------------------------------------------------------FEHRSINCPSLHI 551 (608)
Q Consensus 531 G~~~~~~~-----------------------------------------------------------~~~~~i~~PvL~i 551 (608)
+....... .....+++|+|++
T Consensus 260 p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii 339 (405)
T 3fnb_A 260 PIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFL 339 (405)
T ss_dssp CCSCHHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEE
T ss_pred CcCCHHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEE
Confidence 87643110 0045789999999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccC--CcEEEEe---C-CCCcCCCCh--hhHHHHHHHHHHhC
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEG--CSVIIEH---D-CGHIIPTRS--PYIDEIKSFLQRFL 608 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~---~-gGH~ip~~~--~~~~~i~~Fl~~~L 608 (608)
+|+ +|.++|.+.++++++.+.+. ..+++.+ + +||...... ...+.|.+||.+.|
T Consensus 340 ~G~---~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l 401 (405)
T 3fnb_A 340 VGA---GEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIF 401 (405)
T ss_dssp EET---TSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHH
T ss_pred ecC---CCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHh
Confidence 999 89999999999999999742 2455555 2 346554322 25688899998753
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=133.28 Aligned_cols=103 Identities=12% Similarity=0.073 Sum_probs=69.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.|||+||+++++..|......|.+.. ++++++.+|.|- .. ....
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~-~g~~vi~~D~~G--------~G-------------------~s~~----- 81 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETH-PGTVVTVLDLFD--------GR-------------------ESLR----- 81 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHS-TTCCEEECCSSC--------SG-------------------GGGS-----
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcC-CCcEEEEeccCC--------Cc-------------------cchh-----
Confidence 45679999999999999995544444431 258999998771 00 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCC-CccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEI-DFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~-~l~~vIli 529 (608)
+ ....+++..+.+..+++.......|+||||||.+|+.++.+. +. .++++|++
T Consensus 82 ----------------~-----~~~~~~~~~~~l~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~~v~~lvl~ 135 (302)
T 1pja_A 82 ----------------P-----LWEQVQGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVM-----DDHNVDSFISL 135 (302)
T ss_dssp ----------------C-----HHHHHHHHHHHHHHHHHHCTTCEEEEEETHHHHHHHHHHHHC-----TTCCEEEEEEE
T ss_pred ----------------h-----HHHHHHHHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhc-----CccccCEEEEE
Confidence 0 012355566666666655444558999999999999999854 34 59999998
Q ss_pred cCC
Q 007311 530 SGF 532 (608)
Q Consensus 530 sG~ 532 (608)
++.
T Consensus 136 ~~~ 138 (302)
T 1pja_A 136 SSP 138 (302)
T ss_dssp SCC
T ss_pred CCC
Confidence 864
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=5e-12 Score=125.74 Aligned_cols=171 Identities=10% Similarity=-0.015 Sum_probs=110.8
Q ss_pred CCccEEEEecCC---CCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGF---RQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~---G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..+++||++||. +.+...|......|.+ .++.++.+|.|.. + ...+
T Consensus 61 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~~~~--------~------------------~~~~-- 109 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALS---KGWAVAMPSYELC--------P------------------EVRI-- 109 (262)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHH---TTEEEEEECCCCT--------T------------------TSCH--
T ss_pred CCCCEEEEEcCcccccCChHHHHHHHHHHHh---CCCEEEEeCCCCC--------C------------------CCCh--
Confidence 456789999994 4788888844444432 4799999987610 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHh-hhhCCCCccE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWE-RLKGEIDFRF 525 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~-~~~~~~~l~~ 525 (608)
....+++.+.++++.... ....+|+||||||.+|+.++.+.. ....+..+++
T Consensus 110 ------------------------~~~~~d~~~~~~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~ 162 (262)
T 2pbl_A 110 ------------------------SEITQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRN 162 (262)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEE
T ss_pred ------------------------HHHHHHHHHHHHHHHHhc---cCCEEEEEECHHHHHHHHHhccccccccccccceE
Confidence 011223444444443322 235589999999999999987430 0001457999
Q ss_pred EEEecCCCCCccc----------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE
Q 007311 526 AILCSGFALHSAE----------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE 583 (608)
Q Consensus 526 vIlisG~~~~~~~----------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~ 583 (608)
+|+++++...... .....+.+|+|+++|+ +|.+++.+.++++++.+. .++++
T Consensus 163 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~~~~~~~~~~~~~~~---~~~~~ 236 (262)
T 2pbl_A 163 VVPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGG---AERPAFLDQAIWLVEAWD---ADHVI 236 (262)
T ss_dssp EEEESCCCCCGGGGGSTTHHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEET---TSCHHHHHHHHHHHHHHT---CEEEE
T ss_pred EEEecCccCchHHHhhhhhhhhCCCHHHHHhcCcccccCCCCCCEEEEEeC---CCCcccHHHHHHHHHHhC---CeEEE
Confidence 9999997653211 1234788999999999 899999999999999987 55555
Q ss_pred e-CCCCcCCCChh--hHHHHHHHH
Q 007311 584 H-DCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 584 ~-~gGH~ip~~~~--~~~~i~~Fl 604 (608)
+ ++||..+.+.. ....+.+++
T Consensus 237 ~~~~~H~~~~~~~~~~~~~l~~~l 260 (262)
T 2pbl_A 237 AFEKHHFNVIEPLADPESDLVAVI 260 (262)
T ss_dssp ETTCCTTTTTGGGGCTTCHHHHHH
T ss_pred eCCCCcchHHhhcCCCCcHHHHHH
Confidence 5 45998776432 334555554
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-11 Score=123.29 Aligned_cols=201 Identities=14% Similarity=0.068 Sum_probs=118.8
Q ss_pred CCCccEEEEecCCCCChHHHHHH--HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 369 CRRKLRILCLHGFRQNASSFKGR--TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~--~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..+.|.||+|||++.+...|... +..+... .++.++.+|.+..=. +.... ...-..+.+..|+.
T Consensus 41 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~--~g~~vv~~d~~g~G~---------s~~~~---~~~~~~g~~~~~~~ 106 (278)
T 3e4d_A 41 HEPCPVVWYLSGLTCTHANVMEKGEYRRMASE--LGLVVVCPDTSPRGN---------DVPDE---LTNWQMGKGAGFYL 106 (278)
T ss_dssp TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH--HTCEEEECCSSCCST---------TSCCC---TTCTTSBTTBCTTS
T ss_pred CCCCCEEEEEcCCCCCccchhhcccHHHHHhh--CCeEEEecCCcccCc---------ccccc---cccccccCCccccc
Confidence 34568999999999999998853 3333332 268999999771100 00000 00000000112221
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
... . ++. .......+...+.+.+.+.+.. ...+|+||||||.+|+.++.+. +..
T Consensus 107 ~~~----------~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~ 164 (278)
T 3e4d_A 107 DAT----------E-----EPW--SEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKN-----PER 164 (278)
T ss_dssp BCC----------S-----TTT--TTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC-----TTT
T ss_pred cCC----------c-----Ccc--cchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhC-----Ccc
Confidence 000 0 000 0001112222334445554432 3457999999999999999853 557
Q ss_pred ccEEEEecCCCCCccc--------------------------cccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhc
Q 007311 523 FRFAILCSGFALHSAE--------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFE 575 (608)
Q Consensus 523 l~~vIlisG~~~~~~~--------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~ 575 (608)
++++|++++...+... .......+|+|++||+ +|++++.+. ++++++.+.
T Consensus 165 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~---~D~~v~~~~~~~~~~~~l~ 241 (278)
T 3e4d_A 165 FKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGK---ADSFLEKGLRPWLFEEAIK 241 (278)
T ss_dssp CSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEET---TCTTHHHHTCTHHHHHHHT
T ss_pred cceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecC---CCcccccchhHHHHHHHHH
Confidence 8999999997643210 0112245699999999 899998533 677778777
Q ss_pred cCC--cEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 576 EGC--SVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 576 ~~~--~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
... .+++.+++ +|.+......++++.+|+.++|
T Consensus 242 ~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 242 GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERL 277 (278)
T ss_dssp TSSCEEEEEEETTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCceEEEeCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 532 46667776 9987554567888999998764
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-12 Score=128.48 Aligned_cols=171 Identities=11% Similarity=-0.016 Sum_probs=110.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++.+...|. .+...|.+.+++|.+|.| .+. . + .+ +
T Consensus 27 ~p~vvllHG~~~~~~~w~----~~~~~L~~~~rvia~Dlr--------GhG------~-------S-----~~---~--- 70 (276)
T 2wj6_A 27 GPAILLLPGWCHDHRVYK----YLIQELDADFRVIVPNWR--------GHG------L-------S-----PS---E--- 70 (276)
T ss_dssp SCEEEEECCTTCCGGGGH----HHHHHHTTTSCEEEECCT--------TCS------S-------S-----CC---C---
T ss_pred CCeEEEECCCCCcHHHHH----HHHHHHhcCCEEEEeCCC--------CCC------C-------C-----CC---C---
Confidence 367999999999999999 566666667999999988 110 0 0 00 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHH-hhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQW-ERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~-~~~~~~~~l~~vIli 529 (608)
. ....++...+.|.++++..+ ....|+||||||++|+.+|.++ + ..++++|++
T Consensus 71 ---------------~-----~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P-----~rv~~lvl~ 125 (276)
T 2wj6_A 71 ---------------V-----PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGP-----ERAPRGIIM 125 (276)
T ss_dssp ---------------C-----CCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHH-----HHSCCEEEE
T ss_pred ---------------C-----CCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCH-----HhhceEEEe
Confidence 0 01246667777888888765 4558999999999999999976 4 357788887
Q ss_pred cCCCC--C--------------c------------------cc-----------------------------------cc
Q 007311 530 SGFAL--H--------------S------------------AE-----------------------------------FE 540 (608)
Q Consensus 530 sG~~~--~--------------~------------------~~-----------------------------------~~ 540 (608)
++... . . .. ..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (276)
T 2wj6_A 126 DWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQM 205 (276)
T ss_dssp SCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred cccccCCCchHHHHhhhccCcchHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhH
Confidence 64210 0 0 00 01
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
...+++|+++++|..+ .+.......++++++.+++ .++++. ++||.++.+. .+.+.|.+||.+
T Consensus 206 l~~i~~P~lv~~~~~~-~~~~~~~~~~~~~~~~~p~--a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 206 MANLTKTRPIRHIFSQ-PTEPEYEKINSDFAEQHPW--FSYAKLGGPTHFPAIDVPDRAAVHIREFATA 271 (276)
T ss_dssp HHTCSSCCCEEEEECC-SCSHHHHHHHHHHHHHCTT--EEEEECCCSSSCHHHHSHHHHHHHHHHHHHH
T ss_pred HhhcCCCceEEEEecC-ccchhHHHHHHHHHhhCCC--eEEEEeCCCCCcccccCHHHHHHHHHHHHhh
Confidence 1347788888876410 1222223455677777765 566555 4599876543 267788888864
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.2e-12 Score=137.39 Aligned_cols=61 Identities=21% Similarity=0.250 Sum_probs=48.1
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC--CCCcCCCCh--hhHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD--CGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~--gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
..+++|+|+|+|+ +|.++|.+.++++++.+++ .++++.+ +||.+..+. ...+.|.+||++.
T Consensus 378 ~~i~~PvLvi~G~---~D~~~p~~~~~~l~~~~p~--~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 378 AMITQPALIICAR---SDGLYSFDEHVEMGRSIPN--SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp TTCCSCEEEEECT---TCSSSCHHHHHHHHHHSTT--EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred hcCCCCEEEEEeC---CCCCCCHHHHHHHHHHCCC--cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 4688999999999 8999999999999999986 6666665 699865432 3667788888654
|
| >1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.4e-12 Score=132.70 Aligned_cols=106 Identities=21% Similarity=0.172 Sum_probs=78.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--------ChhhhhccccCCCCccccCcccccCCC--------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--------NLYETRIGKFRTPSVETLDPEIRQFSD-------- 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--------n~~E~~~Gh~~g~~~~~l~~~~~~~~~-------- 192 (608)
...|+++++++++++.. .+++++||||| ...||+.|||+|+. +.+...+.+
T Consensus 7 ~~~is~~~l~~~l~~~~---------~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi----~ip~~~l~~~~~~~~~~ 73 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGK---------VGPGLRVLDASWYSPGTREARKEYLERHVPGAS----FFDIEECRDKASPYEVM 73 (296)
T ss_dssp CSEECHHHHHHHHHTTC---------CBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCE----ECCTTTSSCTTSSSSSC
T ss_pred CceeeHHHHHHHHhccc---------cCCCeEEEEecccCcCCcchhhhHhhCcCCCCE----EeCHHHhcCCCCCCCCC
Confidence 46899999999997510 01478999999 58999999999954 333322322
Q ss_pred ch--HHHHhh---hhhcCCCeEEEEcCC--Ccc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 193 LP--TWIDNN---AEQLQGKHVLMYCTG--GIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 ~~--~~~~~~---~~~~k~k~Iv~yCtg--GiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+| +.+.+. +...++++||+||.+ |.| +.+|+..|+.. ||+||+.|.||+.+|.++
T Consensus 74 lp~~~~~~~~l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~--G~~~V~~L~GG~~~W~~~ 136 (296)
T 1rhs_A 74 LPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVF--GHRTVSVLNGGFRNWLKE 136 (296)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHT--TCCCEEEETTHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHc--CCCcEEEcCCCHHHHHHc
Confidence 11 122221 234689999999998 887 77888889886 999999999999999875
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-11 Score=126.01 Aligned_cols=102 Identities=15% Similarity=0.040 Sum_probs=68.8
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++||||||++.+...|. .+.+.|. .+++++.+|.| +.. . +..+. . .
T Consensus 32 ~~vvllHG~~~~~~~w~----~~~~~L~~~g~~via~Dl~--------G~G------~-------S~~~~--~-~----- 78 (328)
T 2cjp_A 32 PTILFIHGFPELWYSWR----HQMVYLAERGYRAVAPDLR--------GYG------D-------TTGAP--L-N----- 78 (328)
T ss_dssp SEEEEECCTTCCGGGGH----HHHHHHHTTTCEEEEECCT--------TST------T-------CBCCC--T-T-----
T ss_pred CEEEEECCCCCchHHHH----HHHHHHHHCCcEEEEECCC--------CCC------C-------CCCcC--c-C-----
Confidence 57999999999999999 4455554 46999999988 110 0 00000 0 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ .....++..++.|.++++..+ ....|+||||||++|+.+|.++ +..++++|+
T Consensus 79 --------------~-----~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~-----p~~v~~lvl 134 (328)
T 2cjp_A 79 --------------D-----PSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFR-----PDKVKALVN 134 (328)
T ss_dssp --------------C-----GGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred --------------C-----cccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhC-----hhheeEEEE
Confidence 0 001235566666777777654 4568999999999999999865 456888888
Q ss_pred ecC
Q 007311 529 CSG 531 (608)
Q Consensus 529 isG 531 (608)
+++
T Consensus 135 ~~~ 137 (328)
T 2cjp_A 135 LSV 137 (328)
T ss_dssp ESC
T ss_pred Ecc
Confidence 764
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.5e-11 Score=122.33 Aligned_cols=177 Identities=15% Similarity=0.106 Sum_probs=114.4
Q ss_pred CccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..+.||++||.| ++...|......|.+. .++.++.+|.+-. + ...+
T Consensus 72 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~--~g~~v~~~d~rg~--------g------------------~~~~--- 120 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIETHDHICRRLSRL--SDSVVVSVDYRLA--------P------------------EYKF--- 120 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHH--HTCEEEEECCCCT--------T------------------TSCT---
T ss_pred CCcEEEEECCCcccCCChhhhHHHHHHHHHh--cCCEEEEecCCCC--------C------------------CCCC---
Confidence 357899999999 8998888444444332 1689999997711 0 0000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
....+++..++++|.+.+...+ ...+|+|+|+||.+|+.++...++ .+...++
T Consensus 121 -----------------------~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~-~~~~~~~ 176 (311)
T 2c7b_A 121 -----------------------PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRN-SGEKLVK 176 (311)
T ss_dssp -----------------------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH-TTCCCCS
T ss_pred -----------------------CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHh-cCCCCce
Confidence 0123456777778777765543 345899999999999999987653 2234689
Q ss_pred EEEEecCCCCC----cc------------------------------c----------cccCCCCCCEEEEEcCCCCCCc
Q 007311 525 FAILCSGFALH----SA------------------------------E----------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 525 ~vIlisG~~~~----~~------------------------------~----------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
++|+++++... .. . .....+ .|+|+++|+ +|+
T Consensus 177 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~---~D~ 252 (311)
T 2c7b_A 177 KQVLIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAE---YDP 252 (311)
T ss_dssp EEEEESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEET---TCT
T ss_pred eEEEECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcC---CCC
Confidence 99999987651 10 0 001122 299999999 899
Q ss_pred ccchHHHHHHHHHhcc--CCcEEEEeCC-CCcCCCC-------hhhHHHHHHHHHHhC
Q 007311 561 QVANQASKELAKAFEE--GCSVIIEHDC-GHIIPTR-------SPYIDEIKSFLQRFL 608 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~--~~~~vv~~~g-GH~ip~~-------~~~~~~i~~Fl~~~L 608 (608)
+++. +..+++.+.. ..++++.+++ +|.+... .+.++.+.+||++.|
T Consensus 253 ~~~~--~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (311)
T 2c7b_A 253 LRDE--GELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGL 308 (311)
T ss_dssp THHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHT
T ss_pred chHH--HHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHh
Confidence 9863 3333333332 2366666665 9976421 246788899998754
|
| >1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-12 Score=131.03 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=77.6
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh----------------ccccCCCCccccCcccccCCC
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR----------------IGKFRTPSVETLDPEIRQFSD 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~----------------~Gh~~g~~~~~l~~~~~~~~~ 192 (608)
...|+++|+.++++.. ...+.+|||||++.||. .|||+| +++.+...+.+
T Consensus 145 ~~~i~~~el~~~l~~~----------~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpg----A~~ip~~~~~~ 210 (285)
T 1uar_A 145 SIRAYRDDVLEHIIKV----------KEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPG----AKNIPWAKAVN 210 (285)
T ss_dssp GGEECHHHHHHHHHHH----------HTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTT----CEECCGGGGBC
T ss_pred ceEEcHHHHHHHHhhc----------ccCCCcEEEcCCccceeeeccccccccccccccCCcCCC----ccccCHHHhcC
Confidence 4679999999998510 00134799999999997 899999 44444332221
Q ss_pred ----c--hHHHHhhhh---hcCCCeEEEEcCCCccHHHHHHHHH-hcCCCCCcEEEcCccHHHHHH
Q 007311 193 ----L--PTWIDNNAE---QLQGKHVLMYCTGGIRCEMASAYVR-SKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 193 ----~--~~~~~~~~~---~~k~k~Iv~yCtgGiR~~~a~~~L~-~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
+ ++.+.+.+. ..++++||+||.+|.||..|+.+|+ .. ||+||++|.||+.+|..
T Consensus 211 ~~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~--G~~~v~~l~GG~~~W~~ 274 (285)
T 1uar_A 211 PDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLL--GYPHVKNYDGSWTEWGN 274 (285)
T ss_dssp TTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTS--CCSCEEEESSHHHHHTT
T ss_pred CCCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHc--CCCCcceeCchHHHHhc
Confidence 1 222322222 4689999999999999999999999 76 99999999999999973
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.9e-12 Score=127.01 Aligned_cols=169 Identities=18% Similarity=0.116 Sum_probs=116.7
Q ss_pred CccEEEEecCC--CCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGF--RQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~--G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+++|||+||+ +++...|. .+.+.|..+++++.+|.| ... ......
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~----~~~~~L~~~~~vi~~D~~--------G~G------------------~S~~~~-- 87 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFA----NIIDKLPDSIGILTIDAP--------NSG------------------YSPVSN-- 87 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTH----HHHTTSCTTSEEEEECCT--------TST------------------TSCCCC--
T ss_pred CCCEEEEEcCCCCCcHHHHHH----HHHHHHhhcCeEEEEcCC--------CCC------------------CCCCCC--
Confidence 34789999955 55677888 788888888999999988 110 000000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.....+++.++.+.++++..+ ....|+|||+||.+|+.+|.+. +..++++|
T Consensus 88 -----------------------~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lv 139 (292)
T 3l80_A 88 -----------------------QANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQS-----SKACLGFI 139 (292)
T ss_dssp -----------------------CTTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHC-----SSEEEEEE
T ss_pred -----------------------cccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhC-----chheeeEE
Confidence 001246677777888887765 4557999999999999999854 56799999
Q ss_pred Eec---------CCCCC---------------------c---------cc-------------------cc---------
Q 007311 528 LCS---------GFALH---------------------S---------AE-------------------FE--------- 540 (608)
Q Consensus 528 lis---------G~~~~---------------------~---------~~-------------------~~--------- 540 (608)
+++ +.... . .. ..
T Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 219 (292)
T 3l80_A 140 GLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLA 219 (292)
T ss_dssp EESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCC
T ss_pred EECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhh
Confidence 999 33320 0 00 00
Q ss_pred ---------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHHHHHHHHHh
Q 007311 541 ---------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 541 ---------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
... ++|+|+++|+ +|..++.+ + ++.+.+++. .++..++||.++.+. ...+.|.+||+++
T Consensus 220 ~~~~~~~~~l~~-~~P~lii~g~---~D~~~~~~-~-~~~~~~~~~--~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 220 LGEEDFKTGISE-KIPSIVFSES---FREKEYLE-S-EYLNKHTQT--KLILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp CCGGGGCCCCCT-TSCEEEEECG---GGHHHHHT-S-TTCCCCTTC--EEEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred hcchhhhhccCC-CCCEEEEEcc---CccccchH-H-HHhccCCCc--eeeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 113 7999999999 89999888 6 666666653 366677899875432 3678888888753
|
| >3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.9e-12 Score=131.57 Aligned_cols=105 Identities=23% Similarity=0.216 Sum_probs=78.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC---------ChhhhhccccCCCCccccCcccccCC--------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR---------NLYETRIGKFRTPSVETLDPEIRQFS-------- 191 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR---------n~~E~~~Gh~~g~~~~~l~~~~~~~~-------- 191 (608)
...|+++++.+++++. ..+++++||||| +..||+.|||+|+. +.+...++
T Consensus 21 ~~lIs~~~l~~~l~~~---------~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi----~i~~~~~~~~~~~~~~ 87 (302)
T 3olh_A 21 QSMVSAQWVAEALRAP---------RAGQPLQLLDASWYLPKLGRDARREFEERHIPGAA----FFDIDQCSDRTSPYDH 87 (302)
T ss_dssp CCEECHHHHHHHHHCC---------CSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCE----ECCTTTSSCSSCSSSS
T ss_pred CCccCHHHHHHHhcCc---------CCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCe----EeCHHHhcCcCCCCCC
Confidence 4679999999999752 012479999999 78999999999954 33322221
Q ss_pred ------CchHHHHhhhhhcCCCeEEEEcC---CCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 192 ------DLPTWIDNNAEQLQGKHVLMYCT---GGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 192 ------~~~~~~~~~~~~~k~k~Iv~yCt---gGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+|..++.+ +...++++||+||. ++.++.+++..|+.. ||++|+.|.||+.+|.++
T Consensus 88 ~lp~~~~~~~~~~~-lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~--G~~~V~~L~GG~~~W~~~ 151 (302)
T 3olh_A 88 MLPGAEHFAEYAGR-LGVGAATHVVIYDASDQGLYSAPRVWWMFRAF--GHHAVSLLDGGLRHWLRQ 151 (302)
T ss_dssp CCCCHHHHHHHHHH-TTCCSSCEEEEECCCTTSCSSHHHHHHHHHHT--TCCCEEEETTHHHHHHHS
T ss_pred CCCCHHHHHHHHHH-cCCCCCCEEEEEeCCCCCcchHHHHHHHHHHc--CCCcEEECCCCHHHHHHc
Confidence 12233322 23468999999996 456799999999987 999999999999999875
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=3.3e-11 Score=120.95 Aligned_cols=107 Identities=19% Similarity=0.090 Sum_probs=77.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------------cccCC----CC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------------FEHRS----IN 545 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------------~~~~~----i~ 545 (608)
..+|+||||||.+|+.++.+. +..++++|++||...+... ..... +.
T Consensus 140 ~~~l~G~S~GG~~a~~~a~~~-----p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 214 (280)
T 3ls2_A 140 TKAISGHSMGGHGALMIALKN-----PQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNY 214 (280)
T ss_dssp EEEEEEBTHHHHHHHHHHHHS-----TTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGC
T ss_pred CeEEEEECHHHHHHHHHHHhC-----chhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCC
Confidence 447999999999999999854 5678999999997643210 01112 26
Q ss_pred CCEEEEEcCCCCCCcccchHH-HHHHHHHhcc--CCcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 546 CPSLHIFGGDLGNDRQVANQA-SKELAKAFEE--GCSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~--~~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
+|++++||+ +|.+++.+. ++++++.+.. ..+++.++++ +|.+......+.++.+|+.++|
T Consensus 215 ~p~li~~G~---~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~l 278 (280)
T 3ls2_A 215 LPMLVSQGD---ADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFFISSFIDQHLVFHHQYL 278 (280)
T ss_dssp CCEEEEEET---TCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeC---CCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchhhHHHHHHHHHHHHHHHh
Confidence 799999999 899998733 5555555553 2367777776 9987655567888899998764
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-11 Score=125.44 Aligned_cols=104 Identities=18% Similarity=0.112 Sum_probs=71.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++++...|. .+...|.+.++++.+|.| +.. . +..+.....|
T Consensus 25 g~~~vllHG~~~~~~~w~----~~~~~l~~~~~vi~~Dl~--------G~G------~-----s~~~~~~~~~------- 74 (291)
T 3qyj_A 25 GAPLLLLHGYPQTHVMWH----KIAPLLANNFTVVATDLR--------GYG------D-----SSRPASVPHH------- 74 (291)
T ss_dssp SSEEEEECCTTCCGGGGT----TTHHHHTTTSEEEEECCT--------TST------T-----SCCCCCCGGG-------
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhCCCEEEEEcCC--------CCC------C-----CCCCCCCccc-------
Confidence 357999999999999999 666667778999999988 110 0 0000000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++...+.+.++++..+ ....|+||||||.+|+.+|.+. +..++++|+++
T Consensus 75 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~-----p~~v~~lvl~~ 128 (291)
T 3qyj_A 75 ---------------------INYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDH-----PHRVKKLALLD 128 (291)
T ss_dssp ---------------------GGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEES
T ss_pred ---------------------cccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhC-----chhccEEEEEC
Confidence 01245556666777776654 3458999999999999999854 56789999886
Q ss_pred C
Q 007311 531 G 531 (608)
Q Consensus 531 G 531 (608)
.
T Consensus 129 ~ 129 (291)
T 3qyj_A 129 I 129 (291)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.5e-11 Score=122.55 Aligned_cols=58 Identities=22% Similarity=0.308 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.+. .++..+++.+++.+|+
T Consensus 257 ~~P~lii~G~---~D~~~~~~~~~~l~~~~p~--~~~~~i~~~gH~~~-~~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 257 HIPAVIVHGR---YDMACQVQNAWDLAKAWPE--AELHIVEGAGHSYD-EPGILHQLMIATDRFA 315 (317)
T ss_dssp TSCEEEEEET---TCSSSCHHHHHHHHHHCTT--SEEEEETTCCSSTT-SHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEec---CCCCCCHHHHHHHHhhCCC--ceEEEECCCCCCCC-CcchHHHHHHHHHHHh
Confidence 4999999999 8999999999999999976 455555 5699763 3345777777777765
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-12 Score=127.65 Aligned_cols=171 Identities=16% Similarity=0.195 Sum_probs=101.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++||||||+|+++..|. .+.+.|.+.++++.+|.| .+. .-..+
T Consensus 12 ~~~~lv~lhg~g~~~~~~~----~~~~~L~~~~~vi~~Dl~--------GhG---------------------~S~~~-- 56 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFR----PLHAFLQGECEMLAAEPP--------GHG---------------------TNQTS-- 56 (242)
T ss_dssp CCCEEESSCCCCHHHHHHH----HHHHHHCCSCCCEEEECC--------SSC---------------------CSCCC--
T ss_pred CCceEEEECCCCCCHHHHH----HHHHhCCCCeEEEEEeCC--------CCC---------------------CCCCC--
Confidence 3467999999999999999 777888878999999988 110 00000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
..+++.+.++.+.+.+... .....|+||||||++|+.+|.+.+..... ...+++.
T Consensus 57 ----------------------~~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~--p~~v~l~ 112 (242)
T 2k2q_B 57 ----------------------AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIF--PQAVIIS 112 (242)
T ss_dssp ----------------------TTTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCS--SCSEEEE
T ss_pred ----------------------CcCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCC--CCEEEEE
Confidence 0123444333332222111 12348999999999999999864321100 1112222
Q ss_pred cCCCCC--------------------------cc----c---------------------cccCCCCCCEEEEEcCCCCC
Q 007311 530 SGFALH--------------------------SA----E---------------------FEHRSINCPSLHIFGGDLGN 558 (608)
Q Consensus 530 sG~~~~--------------------------~~----~---------------------~~~~~i~~PvL~i~G~~~~~ 558 (608)
+...+. .. . .....+++|+|+++|+ +
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~---~ 189 (242)
T 2k2q_B 113 AIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRALEQFELYDLAQIQSPVHVFNGL---D 189 (242)
T ss_dssp EEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHHHHHHHHTCCCCSCCTTCCCSEEEEEEC---S
T ss_pred CCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHHHhcccCCCCccCCCEEEEeeC---C
Confidence 110000 00 0 0124689999999999 8
Q ss_pred CcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh--hhHHHHHHHHHH
Q 007311 559 DRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 559 D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
|.+++ .....+.+...+ ..++..++||.++.+. ...+.|.+||.+
T Consensus 190 D~~~~-~~~~~~~~~~~~--~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 236 (242)
T 2k2q_B 190 DKKCI-RDAEGWKKWAKD--ITFHQFDGGHMFLLSQTEEVAERIFAILNQ 236 (242)
T ss_dssp SCCHH-HHHHHHHTTCCC--SEEEEEECCCSHHHHHCHHHHHHHHHHHHT
T ss_pred CCcCH-HHHHHHHHHhcC--CeEEEEeCCceeEcCCHHHHHHHHHHHhhc
Confidence 98765 445556555554 3355556899865532 356778888764
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.5e-11 Score=121.49 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHh
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
++|+|+|+|+ +|.++|.+.++++++.+++ .++++. ++||.+ ..++..+++.+++.+|
T Consensus 255 ~~P~Lii~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~-~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 255 DIPGVIVHGR---YDVVCPLQSAWDLHKAWPK--AQLQISPASGHSA-FEPENVDALVRATDGF 312 (313)
T ss_dssp TCCEEEEEET---TCSSSCHHHHHHHHHHCTT--SEEEEETTCCSST-TSHHHHHHHHHHHHHH
T ss_pred CCCEEEEecC---CCCcCCHHHHHHHHhhCCC--cEEEEeCCCCCCc-CCCccHHHHHHHHhhc
Confidence 4999999999 8999999999999999876 455554 569976 3455688888888876
|
| >3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-12 Score=145.38 Aligned_cols=96 Identities=21% Similarity=0.351 Sum_probs=79.7
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
.+.|+++|+.+++++ +++|||||++.||+.|||+| +++.+...+ ...+ .+.+++++
T Consensus 488 ~~~i~~~~~~~~~~~--------------~~~~iDvR~~~e~~~ghi~g----a~~ip~~~l---~~~~---~~l~~~~~ 543 (588)
T 3ics_A 488 VDTVQWHEIDRIVEN--------------GGYLIDVREPNELKQGMIKG----SINIPLDEL---RDRL---EEVPVDKD 543 (588)
T ss_dssp CCEECTTTHHHHHHT--------------TCEEEECSCGGGGGGCBCTT----EEECCHHHH---TTCG---GGSCSSSC
T ss_pred cceecHHHHHHHhcC--------------CCEEEEcCCHHHHhcCCCCC----CEECCHHHH---HHHH---hhCCCCCe
Confidence 467999999999853 58999999999999999999 666553322 2111 23468999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCC
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
||+||.+|.||..|+.+|++. ||+ ||+|.||+.+|.+..+
T Consensus 544 iv~~C~~g~rs~~a~~~l~~~--G~~-v~~l~GG~~~w~~~~~ 583 (588)
T 3ics_A 544 IYITCQLGMRGYVAARMLMEK--GYK-VKNVDGGFKLYGTVLP 583 (588)
T ss_dssp EEEECSSSHHHHHHHHHHHHT--TCC-EEEETTHHHHHHHHCG
T ss_pred EEEECCCCcHHHHHHHHHHHc--CCc-EEEEcchHHHHHhhhh
Confidence 999999999999999999997 998 9999999999998754
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.8e-11 Score=121.31 Aligned_cols=104 Identities=13% Similarity=-0.056 Sum_probs=75.4
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcccc-------------------------------cc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEF-------------------------------EH 541 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~-------------------------------~~ 541 (608)
...+|+|||+||.+|+.++. .+ ..++++|+++++....... ..
T Consensus 117 ~~i~l~G~S~Gg~~a~~~a~-~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (263)
T 2uz0_A 117 EKTFIAGLSMGGYGCFKLAL-TT-----NRFSHAASFSGALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLA 190 (263)
T ss_dssp GGEEEEEETHHHHHHHHHHH-HH-----CCCSEEEEESCCCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHG
T ss_pred CceEEEEEChHHHHHHHHHh-Cc-----cccceEEEecCCcchhhccccccccccchhHHHHcCChhhhccccCCHHHHH
Confidence 34689999999999999988 53 4689999999886443200 11
Q ss_pred CCCC--CCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHHHHHh
Q 007311 542 RSIN--CPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~--~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
..+. +|+|++||+ +|.+++ .++++++.+... ..+++.+++||.+....+.++++.+||.+.
T Consensus 191 ~~~~~~~p~li~~G~---~D~~v~--~~~~~~~~l~~~g~~~~~~~~~g~H~~~~~~~~~~~~~~~l~~~ 255 (263)
T 2uz0_A 191 KKSDKKTKLWAWCGE---QDFLYE--ANNLAVKNLKKLGFDVTYSHSAGTHEWYYWEKQLEVFLTTLPID 255 (263)
T ss_dssp GGCCSCSEEEEEEET---TSTTHH--HHHHHHHHHHHTTCEEEEEEESCCSSHHHHHHHHHHHHHHSSSC
T ss_pred HhccCCCeEEEEeCC---CchhhH--HHHHHHHHHHHCCCCeEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 2232 899999999 899885 457777777653 256677777998754346788888888654
|
| >2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 | Back alignment and structure |
|---|
Probab=99.28 E-value=5.8e-12 Score=117.74 Aligned_cols=109 Identities=16% Similarity=0.186 Sum_probs=71.0
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC----------chHHHH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD----------LPTWID 198 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~----------~~~~~~ 198 (608)
...|+++|+.+++++. .++++|||||++.||+.|||+| +++.+...+.. +|....
T Consensus 19 ~~~is~~~l~~~l~~~-----------~~~~~liDvR~~~ey~~gHI~g----Ainip~~~l~~~~~~~~l~~~lp~~~~ 83 (157)
T 2gwf_A 19 SGAITAKELYTMMTDK-----------NISLIIMDARRMQDYQDSCILH----SLSVPEEAISPGVTASWIEAHLPDDSK 83 (157)
T ss_dssp CCEECHHHHHHHHHST-----------TSCEEEEECSCHHHHHHSCBTT----CEECCGGGCCTTCCHHHHHHTSCHHHH
T ss_pred CCccCHHHHHHHHhcC-----------CCCeEEEECCCHHHHHhcCccC----CcccCHHHcCCCCcHHHHHHHcCHHHH
Confidence 4679999999999751 1379999999999999999999 45544333321 221111
Q ss_pred hhhh-hcCCCeEEEEcCCCcc----HHHHHHHHH----hcC--CCCCc-EEEcCccHHHHHHhCCC
Q 007311 199 NNAE-QLQGKHVLMYCTGGIR----CEMASAYVR----SKG--AGFEN-VFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 199 ~~~~-~~k~k~Iv~yCtgGiR----~~~a~~~L~----~~~--~Gf~n-V~~L~GGi~~w~~~~~~ 252 (608)
.... ..+.+.||+||.+|.+ +..+...|+ +.+ .||.+ |+.|+|||.+|.+.+|.
T Consensus 84 ~l~~~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~~p~ 149 (157)
T 2gwf_A 84 DTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLCYPQ 149 (157)
T ss_dssp HHHHTTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHHCGG
T ss_pred HHHHhcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHHChh
Confidence 1001 1133459999988754 334445544 211 14544 99999999999988763
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=123.59 Aligned_cols=132 Identities=17% Similarity=0.068 Sum_probs=86.7
Q ss_pred cHHHHHHHHHHHH----hHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------
Q 007311 476 GLDVSLAYLKTIF----SQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------ 538 (608)
Q Consensus 476 ~l~~s~~~L~~~i----~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------ 538 (608)
++....++|.+++ +..+ ....++||||||++|+.++.+++.......++++|++++.......
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~ 151 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKL 151 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccccC
Confidence 4445555553333 3333 4457999999999999999865421112379999999985533210
Q ss_pred -------------cccCCCCCCEEEEEcCCC---CCCcccchHHHHHHHHHhccCCc---EEEEeC--CCCc-CCCChhh
Q 007311 539 -------------FEHRSINCPSLHIFGGDL---GNDRQVANQASKELAKAFEEGCS---VIIEHD--CGHI-IPTRSPY 596 (608)
Q Consensus 539 -------------~~~~~i~~PvL~i~G~~~---~~D~~Vp~~~~~~l~~~~~~~~~---~vv~~~--gGH~-ip~~~~~ 596 (608)
...-.-++|++.|+|+.+ ..|.+||.+.++.++..+.+... +.+..+ ++|. ++..++.
T Consensus 152 p~~~~~~~~~~~~~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~v 231 (254)
T 3ds8_A 152 PNSTPQMDYFIKNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPKS 231 (254)
T ss_dssp SSCCHHHHHHHHTGGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHHH
T ss_pred CcchHHHHHHHHHHhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHHH
Confidence 011112799999999832 16999999999999988886322 223333 4686 4555668
Q ss_pred HHHHHHHHHHh
Q 007311 597 IDEIKSFLQRF 607 (608)
Q Consensus 597 ~~~i~~Fl~~~ 607 (608)
.+.|..||+++
T Consensus 232 ~~~i~~fL~~~ 242 (254)
T 3ds8_A 232 IEKTYWFLEKF 242 (254)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 89999999875
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.28 E-value=6.3e-11 Score=125.66 Aligned_cols=173 Identities=14% Similarity=0.105 Sum_probs=115.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+.|+||++||++++...|......|. ..++.++.+|.|- .. ......
T Consensus 150 ~~~P~vl~~hG~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG--------~G------------------~s~~~~--- 197 (386)
T 2jbw_A 150 GPHPAVIMLGGLESTKEESFQMENLVL---DRGMATATFDGPG--------QG------------------EMFEYK--- 197 (386)
T ss_dssp CCEEEEEEECCSSCCTTTTHHHHHHHH---HTTCEEEEECCTT--------SG------------------GGTTTC---
T ss_pred CCCCEEEEeCCCCccHHHHHHHHHHHH---hCCCEEEEECCCC--------CC------------------CCCCCC---
Confidence 456789999999999987663333333 3589999999771 00 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
....++.+.+..+.+.+... ....+|+|+|+||.+|+.++.+ +..+++
T Consensus 198 ----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~------~~~~~a 249 (386)
T 2jbw_A 198 ----------------------RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC------EPRLAA 249 (386)
T ss_dssp ----------------------CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH------CTTCCE
T ss_pred ----------------------CCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC------CcceeE
Confidence 00112333344444444442 2345799999999999999984 457999
Q ss_pred EEEecCCCCCcc---------------------------c--------cccCCCCCCEEEEEcCCCCCCcccchHHHHHH
Q 007311 526 AILCSGFALHSA---------------------------E--------FEHRSINCPSLHIFGGDLGNDRQVANQASKEL 570 (608)
Q Consensus 526 vIlisG~~~~~~---------------------------~--------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l 570 (608)
+|++ +...... . .....+++|+|+++|+ +|. ++.+.++++
T Consensus 250 ~v~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~---~D~-v~~~~~~~l 324 (386)
T 2jbw_A 250 CISW-GGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGV---HDE-VPLSFVDTV 324 (386)
T ss_dssp EEEE-SCCSCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEET---TSS-SCTHHHHHH
T ss_pred EEEe-ccCChHHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECC---CCC-CCHHHHHHH
Confidence 9999 7654310 0 1235678999999999 899 999999999
Q ss_pred HHHh-ccCCcEEEEeC-CCCcCCCC-hhhHHHHHHHHHHhC
Q 007311 571 AKAF-EEGCSVIIEHD-CGHIIPTR-SPYIDEIKSFLQRFL 608 (608)
Q Consensus 571 ~~~~-~~~~~~vv~~~-gGH~ip~~-~~~~~~i~~Fl~~~L 608 (608)
++.+ ... .+++.++ +||.++.. ....+.|.+||.+.|
T Consensus 325 ~~~l~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~l 364 (386)
T 2jbw_A 325 LELVPAEH-LNLVVEKDGDHCCHNLGIRPRLEMADWLYDVL 364 (386)
T ss_dssp HHHSCGGG-EEEEEETTCCGGGGGGTTHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-cEEEEeCCCCcCCccchHHHHHHHHHHHHHhc
Confidence 9999 633 6666665 58976433 247889999998753
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.5e-11 Score=124.96 Aligned_cols=173 Identities=13% Similarity=0.065 Sum_probs=106.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.|||+||+|.+...|. .+..+.+.|..+++++.+|.+..++ ++..-+
T Consensus 37 ~~~~vvllHG~~~~~~~~~-~~~~l~~~L~~g~~Vi~~Dl~~D~~-------------------------G~G~S~---- 86 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFD-YFTNLAEELQGDWAFVQVEVPSGKI-------------------------GSGPQD---- 86 (335)
T ss_dssp SSSEEEEECCTTCCTTCST-THHHHHHHHTTTCEEEEECCGGGBT-------------------------TSCSCC----
T ss_pred CCcEEEEECCCCccccchh-HHHHHHHHHHCCcEEEEEeccCCCC-------------------------CCCCcc----
Confidence 3468999999998765431 1226777777789999997642211 110000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
......++.+.+++|.+.+ ......|+||||||++|+.+|.+.. .+..++++|+++
T Consensus 87 -------------------~~~~~~d~~~~~~~l~~~l--~~~~~~LvGhSmGG~iAl~~A~~~~---~p~rV~~lVL~~ 142 (335)
T 2q0x_A 87 -------------------HAHDAEDVDDLIGILLRDH--CMNEVALFATSTGTQLVFELLENSA---HKSSITRVILHG 142 (335)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHS--CCCCEEEEEEGGGHHHHHHHHHHCT---TGGGEEEEEEEE
T ss_pred -------------------ccCcHHHHHHHHHHHHHHc--CCCcEEEEEECHhHHHHHHHHHhcc---chhceeEEEEEC
Confidence 0001123333333333221 2244589999999999999998421 135689999987
Q ss_pred CCCCCc----------------------------------------cc---------------------------cccCC
Q 007311 531 GFALHS----------------------------------------AE---------------------------FEHRS 543 (608)
Q Consensus 531 G~~~~~----------------------------------------~~---------------------------~~~~~ 543 (608)
+..... .. .....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (335)
T 2q0x_A 143 VVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGV 222 (335)
T ss_dssp ECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGG
T ss_pred CcccchhcccCHHHHHHHHHHHHHHhhccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhc
Confidence 642100 00 01246
Q ss_pred CCCCEEEEEcCCCCCCcccchHH-----HHHHHHHhccCCc-------E-----EEEeCCCCcCCCChhhHHHHHHHHHH
Q 007311 544 INCPSLHIFGGDLGNDRQVANQA-----SKELAKAFEEGCS-------V-----IIEHDCGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~-----~~~l~~~~~~~~~-------~-----vv~~~gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
|++|+|+|||+ +|+++|.+. ++++++.+++... . ++..++|| +..+.|.+||.+
T Consensus 223 i~~PtLvi~G~---~D~~vp~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH------e~~~~i~~FL~~ 293 (335)
T 2q0x_A 223 IKVPLLLMLAH---NVQYKPSDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES------EHVAAILQFLAD 293 (335)
T ss_dssp CCSCEEEEEEC---CTTCCCCHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH------HHHHHHHHHHHH
T ss_pred CCCCeEEEEec---CCCCCChhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC------HHHHHHHHHHHh
Confidence 78999999999 899999763 4667777665321 3 45557799 458899999975
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=98.93 E-value=3.8e-13 Score=134.62 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=43.0
Q ss_pred cCCCCCCEEEEEcCCCCCCccc-chHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQV-ANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~V-p~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
...+++|+|+|+|+ +|+.+ +....+.+.+.+++. ..++. ++||.++.+.+ ..+.|.+||++
T Consensus 228 ~~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~~-~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~ 291 (304)
T 3b12_A 228 GRQVQCPALVFSGS---AGLMHSLFEMQVVWAPRLANM-RFASL-PGGHFFVDRFPDDTARILREFLSD 291 (304)
Confidence 35789999999999 89554 556667777777653 22333 88999766533 56778888865
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.9e-11 Score=128.46 Aligned_cols=126 Identities=19% Similarity=0.285 Sum_probs=87.2
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----------------
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA---------------- 537 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~---------------- 537 (608)
.+++.+++++|.+.........+|+||||||.+|+.+|.+. + .++++|++++......
T Consensus 206 ~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~-----p-~v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (422)
T 3k2i_A 206 LEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFL-----K-NVSATVSINGSGISGNTAINYKHSSIPPLGYD 279 (422)
T ss_dssp THHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHC-----S-SEEEEEEESCCSBCCSSCEEETTEEECCCCBC
T ss_pred HHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhC-----c-CccEEEEEcCcccccCCchhhcCCcCCCcccc
Confidence 34566666666544322345668999999999999999853 2 3899999887752100
Q ss_pred -----------------------------ccccCCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccC--C-cEEEEe
Q 007311 538 -----------------------------EFEHRSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEG--C-SVIIEH 584 (608)
Q Consensus 538 -----------------------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~--~-~~vv~~ 584 (608)
......+++|+|++||+ +|.++|.+.. +++.+.+... . .+++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~---~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~ 356 (422)
T 3k2i_A 280 LRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQ---DDHNWRSELYAQTVSERLQAHGKEKPQIICY 356 (422)
T ss_dssp GGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEET---TCSSSCHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred hhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeC---CCCCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 00235688999999999 8999998855 5777777642 1 556666
Q ss_pred C-CCCcCCC------------------------------ChhhHHHHHHHHHHhC
Q 007311 585 D-CGHIIPT------------------------------RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 585 ~-gGH~ip~------------------------------~~~~~~~i~~Fl~~~L 608 (608)
+ +||.+.. ..+..+.+.+||.+.|
T Consensus 357 ~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L 411 (422)
T 3k2i_A 357 PGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 411 (422)
T ss_dssp TTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 6999721 1236788999998765
|
| >3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.6e-12 Score=133.87 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=76.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc----------------cccCCCCccccCcccccCCC
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI----------------GKFRTPSVETLDPEIRQFSD 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~----------------Gh~~g~~~~~l~~~~~~~~~ 192 (608)
...++++|+.+++++ . +|||||++.||+. |||+| +++.+...+.+
T Consensus 178 ~~~i~~~el~~~l~~--------------~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpG----A~niP~~~~~~ 238 (318)
T 3hzu_A 178 PIRAFRDDVLAILGA--------------Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPT----AVHIPWGKAAD 238 (318)
T ss_dssp TTBCCHHHHHHHTTT--------------S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTT----CEECCGGGGBC
T ss_pred cccccHHHHHHhhcC--------------C-eEEecCCHHHhcccccCccccccccCCcCcCCCC----eeecCHHHhcC
Confidence 456899999998853 2 8999999999998 99999 44444322110
Q ss_pred ----c--hHHHHhh-hhhcCCCeEEEEcCCCccHHHHHHHHHh-cCCCCCcEEEcCccHHHHHHh
Q 007311 193 ----L--PTWIDNN-AEQLQGKHVLMYCTGGIRCEMASAYVRS-KGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 ----~--~~~~~~~-~~~~k~k~Iv~yCtgGiR~~~a~~~L~~-~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+ ++.+.+. ....++++||+||.+|.||..++..|++ . ||+||++|.||+..|...
T Consensus 239 ~~g~~~~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~--G~~~v~~~~GG~~~W~~~ 301 (318)
T 3hzu_A 239 ESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLL--GKADVRNYDGSWTEWGNA 301 (318)
T ss_dssp TTSCBCCHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTS--CCSSCEECTTHHHHHTTS
T ss_pred CCCcCCCHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHc--CCCCeeEeCCcHHHHhcC
Confidence 1 1223322 2356899999999999999999999987 6 999999999999999853
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-11 Score=129.36 Aligned_cols=174 Identities=11% Similarity=0.053 Sum_probs=115.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|+||++||++++...+.. .+...| ..++.++.+|.|- .. . ...+..
T Consensus 191 ~~~P~vv~~hG~~~~~~~~~~---~~~~~l~~~G~~V~~~D~~G--------~G------~-----------s~~~~~-- 240 (415)
T 3mve_A 191 KPHPVVIVSAGLDSLQTDMWR---LFRDHLAKHDIAMLTVDMPS--------VG------Y-----------SSKYPL-- 240 (415)
T ss_dssp SCEEEEEEECCTTSCGGGGHH---HHHHTTGGGTCEEEEECCTT--------SG------G-----------GTTSCC--
T ss_pred CCCCEEEEECCCCccHHHHHH---HHHHHHHhCCCEEEEECCCC--------CC------C-----------CCCCCC--
Confidence 446889999999999654431 345555 4689999999881 00 0 000000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
..++......+.+.+.... ...+|+|||+||.+|+.++... +..++
T Consensus 241 -------------------------~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~-----~~~v~ 290 (415)
T 3mve_A 241 -------------------------TEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLE-----QEKIK 290 (415)
T ss_dssp -------------------------CSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHT-----TTTCC
T ss_pred -------------------------CCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhC-----Cccee
Confidence 0112223344555555443 2346999999999999999843 56799
Q ss_pred EEEEecCCCCCcc--------------------------c-------------cc-----cCCCCCCEEEEEcCCCCCCc
Q 007311 525 FAILCSGFALHSA--------------------------E-------------FE-----HRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 525 ~vIlisG~~~~~~--------------------------~-------------~~-----~~~i~~PvL~i~G~~~~~D~ 560 (608)
++|++++...... . .. ...+++|+|+++|+ +|.
T Consensus 291 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~---~D~ 367 (415)
T 3mve_A 291 ACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLE---GDP 367 (415)
T ss_dssp EEEEESCCCSHHHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEET---TCS
T ss_pred EEEEECCccccccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeC---CCC
Confidence 9999998742100 0 00 24788999999999 899
Q ss_pred ccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 561 QVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++|.+.++++.+...+ .+++.+++++.....+..++.+.+||++.|
T Consensus 368 ~vp~~~~~~l~~~~~~--~~l~~i~g~~~h~~~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 368 VSPYSDNQMVAFFSTY--GKAKKISSKTITQGYEQSLDLAIKWLEDEL 413 (415)
T ss_dssp SSCHHHHHHHHHTBTT--CEEEEECCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCC--ceEEEecCCCcccchHHHHHHHHHHHHHHh
Confidence 9999999999886655 677767663333233457889999998753
|
| >3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.7e-12 Score=130.82 Aligned_cols=98 Identities=18% Similarity=0.175 Sum_probs=73.8
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc----------------cccCCCCccccCcccccCC--
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI----------------GKFRTPSVETLDPEIRQFS-- 191 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~----------------Gh~~g~~~~~l~~~~~~~~-- 191 (608)
..++++++.+++++ .+ |||||+..||+. |||+|+ ++.+...+.
T Consensus 144 ~~~~~~el~~~~~~-------------~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA----~~ip~~~~~~~ 204 (277)
T 3aay_A 144 IRAFRDEVLAAINV-------------KN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGA----INVPWSRAANE 204 (277)
T ss_dssp GEECHHHHHHTTTT-------------SE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTC----EECCGGGGBCT
T ss_pred hhcCHHHHHHhcCC-------------CC--EEEeCChHHeeeeecccccccccccccCCcCCCc----eecCHHHhcCC
Confidence 34789999988754 23 999999999985 999994 443322111
Q ss_pred --Cc--hHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHh-cCCCCCcEEEcCccHHHHHH
Q 007311 192 --DL--PTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRS-KGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 192 --~~--~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~-~~~Gf~nV~~L~GGi~~w~~ 248 (608)
.+ ++.+.+.+ ...++++||+||.+|.|+..++..|++ . ||+||++|.||+.+|..
T Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~--G~~~v~~l~GG~~~W~~ 267 (277)
T 3aay_A 205 DGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELL--GHQNVKNYDGSWTEYGS 267 (277)
T ss_dssp TSCBCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTS--CCSCEEEESSHHHHHTT
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHc--CCCcceeeCchHHHHhc
Confidence 01 12233222 346899999999999999999999986 6 99999999999999976
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=118.57 Aligned_cols=160 Identities=14% Similarity=0.193 Sum_probs=104.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|+|+||+|++...|. .+.+.|.. ++++.+|.|- .. .
T Consensus 17 ~~~l~~~hg~~~~~~~~~----~~~~~l~~-~~v~~~d~~g--------~~--------------------~-------- 55 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQ----NLSSRLPS-YKLCAFDFIE--------EE--------------------D-------- 55 (230)
T ss_dssp SEEEEEECCTTCCGGGGH----HHHHHCTT-EEEEEECCCC--------ST--------------------T--------
T ss_pred CCCEEEECCCCCchHHHH----HHHHhcCC-CeEEEecCCC--------HH--------------------H--------
Confidence 467999999999999999 88888888 9999998760 00 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
......+.+.. +...++ ..|+|||+||.+|+.+|.+.+. ....++++|++++
T Consensus 56 ------------------------~~~~~~~~i~~-~~~~~~-~~l~G~S~Gg~ia~~~a~~~~~--~~~~v~~lvl~~~ 107 (230)
T 1jmk_C 56 ------------------------RLDRYADLIQK-LQPEGP-LTLFGYSAGCSLAFEAAKKLEG--QGRIVQRIIMVDS 107 (230)
T ss_dssp ------------------------HHHHHHHHHHH-HCCSSC-EEEEEETHHHHHHHHHHHHHHH--TTCCEEEEEEESC
T ss_pred ------------------------HHHHHHHHHHH-hCCCCC-eEEEEECHhHHHHHHHHHHHHH--cCCCccEEEEECC
Confidence 01111111211 111234 4899999999999999987652 2356889999887
Q ss_pred CCCCcc--------------------c---------------------------cccCCCCCCEEEEEcCCCCCCcccch
Q 007311 532 FALHSA--------------------E---------------------------FEHRSINCPSLHIFGGDLGNDRQVAN 564 (608)
Q Consensus 532 ~~~~~~--------------------~---------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~ 564 (608)
+.+... . .....+++|+++++|+ +|..++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~- 183 (230)
T 1jmk_C 108 YKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSG---ADFDIP- 183 (230)
T ss_dssp CEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECS---SCCCCC-
T ss_pred CCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHHHHHHHHhhhccccccccccEEEEEeC---CCCCCc-
Confidence 654210 0 0125788999999999 898876
Q ss_pred HHHHHHHHHhccCCcEEEEeCCCC--cCCCChhhHHHHHHHHHHh
Q 007311 565 QASKELAKAFEEGCSVIIEHDCGH--IIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 565 ~~~~~l~~~~~~~~~~vv~~~gGH--~ip~~~~~~~~i~~Fl~~~ 607 (608)
.....+.+.... ...++..++|| ++.. +..+.+.+.|.++
T Consensus 184 ~~~~~w~~~~~~-~~~~~~i~g~H~~~~~~--~~~~~~~~~i~~~ 225 (230)
T 1jmk_C 184 EWLASWEEATTG-AYRMKRGFGTHAEMLQG--ETLDRNAGILLEF 225 (230)
T ss_dssp TTEECSGGGBSS-CEEEEECSSCGGGTTSH--HHHHHHHHHHHHH
T ss_pred cccchHHHhcCC-CeEEEEecCChHHHcCc--HhHHHHHHHHHHH
Confidence 333334444333 36777888899 6643 4455555555444
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.5e-11 Score=122.44 Aligned_cols=166 Identities=15% Similarity=0.166 Sum_probs=113.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||+|+++..|. .|.+.|. ++++.+|.|-..
T Consensus 24 ~~~l~~~hg~~~~~~~~~----~~~~~L~--~~v~~~d~~~~~------------------------------------- 60 (283)
T 3tjm_A 24 ERPLFLVHPIEGSTTVFH----SLASRLS--IPTYGLQCTRAA------------------------------------- 60 (283)
T ss_dssp SCCEEEECCTTCCSGGGH----HHHHHCS--SCEEEECCCTTS-------------------------------------
T ss_pred CCeEEEECCCCCCHHHHH----HHHHhcC--ceEEEEecCCCC-------------------------------------
Confidence 457999999999999999 8888887 888888875100
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCcc---EE
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFR---FA 526 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~---~v 526 (608)
...++++..+.+.+.|.... ....|+||||||.+|+.+|.+.++ .+..+. ++
T Consensus 61 ---------------------~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~--~~~~v~~~~~l 117 (283)
T 3tjm_A 61 ---------------------PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQA--QQSPAPTHNSL 117 (283)
T ss_dssp ---------------------CCSCHHHHHHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHHH--HHTTSCCCCEE
T ss_pred ---------------------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHH--cCCCCCccceE
Confidence 01245666777777777652 234899999999999999987642 134566 99
Q ss_pred EEecCCCCCc----------------------------------------------c--------------------c--
Q 007311 527 ILCSGFALHS----------------------------------------------A--------------------E-- 538 (608)
Q Consensus 527 IlisG~~~~~----------------------------------------------~--------------------~-- 538 (608)
|++++.+++. . .
T Consensus 118 vlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (283)
T 3tjm_A 118 FLFDGSPTYVLAYTGSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQ 197 (283)
T ss_dssp EEESCCTTHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTSSSHHHHHHHHHHHHHHHCTTSCHH
T ss_pred EEEcCCchhhhhhhhhhhhccCCCCchHHHHHHHHHHHHHhcccchhHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCHH
Confidence 9998865320 0 0
Q ss_pred ------------------cc-cCCCCCCEEEEEcCCCCCCccc--chHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhH
Q 007311 539 ------------------FE-HRSINCPSLHIFGGDLGNDRQV--ANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYI 597 (608)
Q Consensus 539 ------------------~~-~~~i~~PvL~i~G~~~~~D~~V--p~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~ 597 (608)
.. ..++.+|+++++|+ +|..+ +.+....+.+.... ...++..+|||+.....+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~~~~~~~~Pvl~l~g~---~d~~~~~~~~~~~~w~~~~~~-~~~~~~v~ggH~~~l~~p~~ 273 (283)
T 3tjm_A 198 ELSFAARSFYYKLRAAEQYTPKAKYHGNVMLLRAK---TGGAYGEAAGADYNLSQVCDG-KVSVHVIEGDHATLLEGSGL 273 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSCBCSCEEEEEC-----------CCTTTTTGGGTBCS-CEEEEECSSCTTGGGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCEEEEecC---CccccccccCcccchHhhccC-ceEEEEECCCCceeeCCchH
Confidence 00 13789999999999 77653 33333445555443 37788889999988877888
Q ss_pred HHHHHHHHHh
Q 007311 598 DEIKSFLQRF 607 (608)
Q Consensus 598 ~~i~~Fl~~~ 607 (608)
+++.+.|.++
T Consensus 274 ~~va~~i~~~ 283 (283)
T 3tjm_A 274 ESIISIIHSS 283 (283)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 8888887653
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-11 Score=123.11 Aligned_cols=105 Identities=12% Similarity=0.041 Sum_probs=75.1
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------cccCCCCCC-EEEEEcCCCCCCcccch
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------FEHRSINCP-SLHIFGGDLGNDRQVAN 564 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------~~~~~i~~P-vL~i~G~~~~~D~~Vp~ 564 (608)
...+|+||||||.+|+.++.+ .+..++++|+++|....... .......+| ++++||+ +|.++|.
T Consensus 145 ~~i~l~G~S~GG~~a~~~a~~-----~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~pp~li~~G~---~D~~v~~ 216 (268)
T 1jjf_A 145 EHRAIAGLSMGGGQSFNIGLT-----NLDKFAYIGPISAAPNTYPNERLFPDGGKAAREKLKLLFIACGT---NDSLIGF 216 (268)
T ss_dssp GGEEEEEETHHHHHHHHHHHT-----CTTTCSEEEEESCCTTSCCHHHHCTTTTHHHHHHCSEEEEEEET---TCTTHHH
T ss_pred CceEEEEECHHHHHHHHHHHh-----CchhhhheEEeCCCCCCCchhhhcCcchhhhhhcCceEEEEecC---CCCCccH
Confidence 346899999999999999984 35568999999997543221 011123566 9999999 8999884
Q ss_pred HHHHHHHHHhccC--CcEEEEeC-CCCcCCCChhhHHHHHHHHHHh
Q 007311 565 QASKELAKAFEEG--CSVIIEHD-CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 565 ~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
++++++.+... ..++++++ ++|.+....+.+..+.+||.+.
T Consensus 217 --~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 217 --GQRVHEYCVANNINHVYWLIQGGGHDFNVWKPGLWNFLQMADEA 260 (268)
T ss_dssp --HHHHHHHHHHTTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCceEEEEcCCCCcCHhHHHHHHHHHHHHHHhc
Confidence 66677766542 35666666 5998765556778888888753
|
| >2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4.2e-12 Score=137.46 Aligned_cols=105 Identities=19% Similarity=0.248 Sum_probs=78.4
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-----------hccccCCCCccccC---cccccCCC--
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-----------RIGKFRTPSVETLD---PEIRQFSD-- 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-----------~~Gh~~g~~~~~l~---~~~~~~~~-- 192 (608)
...++++|+.+++++ ++++|||||++.|| +.|||+|+..+++. .+...+.+
T Consensus 271 ~~~i~~~e~~~~l~~-------------~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~ 337 (423)
T 2wlr_A 271 QLMLDMEQARGLLHR-------------QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPD 337 (423)
T ss_dssp GGEECHHHHHTTTTC-------------SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTT
T ss_pred hheecHHHHHHHhcC-------------CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCC
Confidence 345899999988754 47899999999999 89999996433321 11111110
Q ss_pred ----chHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 193 ----LPTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 193 ----~~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
-++.+.+.. ...++++||+||.+|.||..++.+|+.+ ||+||++|.||+.+|..
T Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~--G~~~v~~~~GG~~~W~~ 398 (423)
T 2wlr_A 338 GTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAM--GWKNVSVYDGGWYEWSS 398 (423)
T ss_dssp SSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHT--TCSSEEEESSHHHHHTT
T ss_pred CcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHc--CCCCcceeCccHHHHhc
Confidence 011232222 3468999999999999999999999987 99999999999999976
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-10 Score=121.08 Aligned_cols=61 Identities=23% Similarity=0.240 Sum_probs=44.3
Q ss_pred CCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCC-Ch-h-hHHHHHHHHHHhC
Q 007311 542 RSIN-CPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPT-RS-P-YIDEIKSFLQRFL 608 (608)
Q Consensus 542 ~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~-~~-~-~~~~i~~Fl~~~L 608 (608)
..++ +|+|+++|+ +|. +.+.++++++..... .+++++++ ||.... .+ . ..+.+.+||.+.|
T Consensus 302 ~~i~~~PvLii~G~---~D~--~~~~~~~~~~~~~~~-~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 302 KEISPRPILLIHGE---RAH--SRYFSETAYAAAAEP-KELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp GGGTTSCEEEEEET---TCT--THHHHHHHHHHSCSS-EEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred HhhcCCceEEEecC---CCC--CHHHHHHHHHhCCCC-eeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 4567 999999999 787 778888888764333 66666665 997321 11 1 5899999998865
|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=99.25 E-value=5.8e-12 Score=138.25 Aligned_cols=96 Identities=25% Similarity=0.378 Sum_probs=79.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++++.+++++ ++++|||||++.||+.|||+| +++.+... +..++ .+.+++++
T Consensus 373 ~~~i~~~~l~~~~~~-------------~~~~lvDvR~~~e~~~ghIpg----A~~ip~~~---l~~~~---~~l~~~~~ 429 (474)
T 3tp9_A 373 YANVSPDEVRGALAQ-------------QGLWLLDVRNVDEWAGGHLPQ----AHHIPLSK---LAAHI---HDVPRDGS 429 (474)
T ss_dssp CEEECHHHHHHTTTT-------------TCCEEEECSCHHHHHHCBCTT----CEECCHHH---HTTTG---GGSCSSSC
T ss_pred ccccCHHHHHHHhcC-------------CCcEEEECCCHHHHhcCcCCC----CEECCHHH---HHHHH---hcCCCCCE
Confidence 356899999888754 578999999999999999999 55554322 22212 23568999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.|+..++..|+.. ||+||+.|.||+.+|.+.
T Consensus 430 vvv~C~~G~ra~~a~~~L~~~--G~~~v~~~~Gg~~~W~~~ 468 (474)
T 3tp9_A 430 VCVYCRTGGRSAIAASLLRAH--GVGDVRNMVGGYEAWRGK 468 (474)
T ss_dssp EEEECSSSHHHHHHHHHHHHH--TCSSEEEETTHHHHHHHT
T ss_pred EEEECCCCHHHHHHHHHHHHc--CCCCEEEecChHHHHHhC
Confidence 999999999999999999998 999999999999999875
|
| >3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2e-12 Score=144.71 Aligned_cols=81 Identities=22% Similarity=0.386 Sum_probs=67.4
Q ss_pred CCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCc
Q 007311 156 DKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFEN 235 (608)
Q Consensus 156 ~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~n 235 (608)
+++++|||||++.||+.|||+| +++.+... +..+++ +.+++++||+||.+|.||.+|+.+|+++ || |
T Consensus 484 ~~~~~~iDvR~~~e~~~~~i~g----a~~ip~~~---l~~~~~---~~~~~~~iv~~c~~g~rs~~a~~~l~~~--G~-~ 550 (565)
T 3ntd_A 484 SEDQLLLDVRNPGELQNGGLEG----AVNIPVDE---LRDRMH---ELPKDKEIIIFSQVGLRGNVAYRQLVNN--GY-R 550 (565)
T ss_dssp CTTEEEEECSCGGGGGGCCCTT----CEECCGGG---TTTSGG---GSCTTSEEEEECSSSHHHHHHHHHHHHT--TC-C
T ss_pred CCCcEEEEeCCHHHHhcCCCCC----cEECCHHH---HHHHHh---hcCCcCeEEEEeCCchHHHHHHHHHHHc--CC-C
Confidence 3678999999999999999999 55555333 333222 3468999999999999999999999997 99 9
Q ss_pred EEEcCccHHHHHHh
Q 007311 236 VFQLYGGIQRYLEQ 249 (608)
Q Consensus 236 V~~L~GGi~~w~~~ 249 (608)
||+|+||+.+|.+.
T Consensus 551 v~~l~gG~~~w~~~ 564 (565)
T 3ntd_A 551 ARNLIGGYRTYKFA 564 (565)
T ss_dssp EEEETTHHHHHHHT
T ss_pred EEEEcChHHHHHhC
Confidence 99999999999863
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-11 Score=124.95 Aligned_cols=171 Identities=16% Similarity=0.176 Sum_probs=111.2
Q ss_pred CCccEEEEecCCCCCh--HHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNA--SSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na--~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..+++|||+||++++. ..|. .+...|...++++.+|.| ... - .
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~----~~~~~l~~~~~v~~~d~~--------G~G---------------------~--s 109 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFT----RLAGALRGIAPVRAVPQP--------GYE---------------------E--G 109 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTH----HHHHHTSSSCCBCCCCCT--------TSS---------------------T--T
T ss_pred CCCCeEEEECCCcccCcHHHHH----HHHHhcCCCceEEEecCC--------CCC---------------------C--C
Confidence 4457899999999987 8898 777888777888888766 000 0 0
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHh-HhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS-QEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~-~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
. . ....+++.++.+.+.+. ..+ ....|+|||+||.+|+.++.+++. ....+++
T Consensus 110 ~------------------~-----~~~~~~~~a~~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~--~g~~v~~ 164 (300)
T 1kez_A 110 E------------------P-----LPSSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLD--RGHPPRG 164 (300)
T ss_dssp C------------------C-----BCSSHHHHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTT--TTCCCSE
T ss_pred C------------------C-----CCCCHHHHHHHHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHh--cCCCccE
Confidence 0 0 01234555555554333 222 335899999999999999986541 1347999
Q ss_pred EEEecCCCCCccc--------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHH
Q 007311 526 AILCSGFALHSAE--------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 526 vIlisG~~~~~~~--------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
+|+++++.+.... .....+++|+|+|+|+ |+.++...
T Consensus 165 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~----d~~~~~~~- 239 (300)
T 1kez_A 165 VVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAG----EPMGPWPD- 239 (300)
T ss_dssp EECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHHHHHHHHTTTCCCCCCSCCBEEEEES----SCSSCCCS-
T ss_pred EEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeC----CCCCCCcc-
Confidence 9999987654320 1135789999999997 44555433
Q ss_pred HHHHHHhccCCcEEEEeCCCCcCCC-C--hhhHHHHHHHHHH
Q 007311 568 KELAKAFEEGCSVIIEHDCGHIIPT-R--SPYIDEIKSFLQR 606 (608)
Q Consensus 568 ~~l~~~~~~~~~~vv~~~gGH~ip~-~--~~~~~~i~~Fl~~ 606 (608)
..+.+.+.. ..+++..++||.... + ....+.|.+||.+
T Consensus 240 ~~~~~~~~~-~~~~~~i~ggH~~~~~e~~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 240 DSWKPTWPF-EHDTVAVPGDHFTMVQEHADAIARHIDAWLGG 280 (300)
T ss_dssp SCCSCCCSS-CCEEEEESSCTTTSSSSCSHHHHHHHHHHHTC
T ss_pred cchhhhcCC-CCeEEEecCCChhhccccHHHHHHHHHHHHHh
Confidence 333333332 256677777999763 2 3467888888864
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.5e-11 Score=124.46 Aligned_cols=104 Identities=19% Similarity=0.030 Sum_probs=80.1
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc------------------------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------------------------------------ 537 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------------------------------------ 537 (608)
..+|+|+||||.+|+.++.+. .+++++|+++++.....
T Consensus 193 ~i~l~G~S~GG~la~~~a~~~------p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T 1vlq_A 193 RIVIAGGSQGGGIALAVSALS------KKAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFD 266 (337)
T ss_dssp EEEEEEETHHHHHHHHHHHHC------SSCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred eEEEEEeCHHHHHHHHHHhcC------CCccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhcc
Confidence 457999999999999999853 25899999887643210
Q ss_pred -ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 538 -EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 538 -~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
......+++|+|+++|+ +|.++|.+.+.++++.+... .+++.+++ ||.+.. .+..+.+.+||.++|
T Consensus 267 ~~~~~~~i~~P~lii~G~---~D~~~p~~~~~~~~~~l~~~-~~~~~~~~~gH~~~~-~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 267 GVNFAARAKIPALFSVGL---MDNICPPSTVFAAYNYYAGP-KEIRIYPYNNHEGGG-SFQAVEQVKFLKKLF 334 (337)
T ss_dssp HHHHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHCCSS-EEEEEETTCCTTTTH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeC---CCCCCCchhHHHHHHhcCCC-cEEEEcCCCCCCCcc-hhhHHHHHHHHHHHH
Confidence 01235678999999999 89999999999999998864 66666654 999643 457889999998764
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.4e-11 Score=120.58 Aligned_cols=119 Identities=14% Similarity=0.073 Sum_probs=82.2
Q ss_pred HHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------------
Q 007311 482 AYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------------- 538 (608)
Q Consensus 482 ~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------------- 538 (608)
+.+...+++. ....+|+||||||.+|+.++.+. +..++++|++||...+...
T Consensus 131 ~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~-----p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 205 (283)
T 4b6g_A 131 NELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRN-----QERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQ 205 (283)
T ss_dssp THHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHH-----GGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGG
T ss_pred HHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhC-----CccceeEEEECCccccccCcchhhhHHhhcCCchHHHHh
Confidence 3444444443 23457999999999999999865 3468899999997643210
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhcc--CCcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEE--GCSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~--~~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
........|++++||+ .|.+++... ++++++.+.. ..+++.++++ +|.+..-...+.++.+|+.+.|
T Consensus 206 ~~~~~~~~~~~~~~p~li~~G~---~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 206 YDANSLIQQGYKVQGMRIDQGL---EDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFL 282 (283)
T ss_dssp GCHHHHHHHTCCCSCCEEEEET---TCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHhcccCCCEEEEecC---CCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHhHHHHHHHHHHHHHHHhc
Confidence 0111234699999999 899998622 5666666653 2367777776 9987555567888999998865
|
| >1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 | Back alignment and structure |
|---|
Probab=99.24 E-value=8.1e-12 Score=116.68 Aligned_cols=109 Identities=16% Similarity=0.243 Sum_probs=71.0
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC--chHHHHhhh-----
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD--LPTWIDNNA----- 201 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~--~~~~~~~~~----- 201 (608)
...|+++|+.+++++. .++++|||||++.||+.|||+| +++.+...+.+ ....+...+
T Consensus 14 ~~~i~~~~l~~~l~~~-----------~~~~~liDvR~~~ey~~gHI~g----ainip~~~~~~~~~~~~l~~~lp~~~~ 78 (157)
T 1whb_A 14 KGAITAKELYTMMTDK-----------NISLIIMDARRMQDYQDSCILH----SLSVPEEAISPGVTASWIEAHLPDDSK 78 (157)
T ss_dssp CSEECHHHHHHHHTCS-----------SSCEEEEEESCHHHHHHCCBTT----CEEECSSSCCTTCCHHHHHHSCCTTHH
T ss_pred CCccCHHHHHHHHhcC-----------CCCeEEEECCCHHHHHhccccC----CcccCHHHccCCCcHHHHHHHCChHHH
Confidence 5689999999999751 1378999999999999999999 44444322221 001111110
Q ss_pred ----hhcCCCeEEEEcCCCcc----HHHHHHHHHhc----C--CCCCc-EEEcCccHHHHHHhCCC
Q 007311 202 ----EQLQGKHVLMYCTGGIR----CEMASAYVRSK----G--AGFEN-VFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 202 ----~~~k~k~Iv~yCtgGiR----~~~a~~~L~~~----~--~Gf~n-V~~L~GGi~~w~~~~~~ 252 (608)
.....+.||+||.+|.+ +..+...|++. + .||.+ |+.|+|||.+|.+.+|.
T Consensus 79 ~~~~~~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~~p~ 144 (157)
T 1whb_A 79 DTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLCYPQ 144 (157)
T ss_dssp HHHHGGGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHHCGG
T ss_pred HHHHhcCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHHChh
Confidence 11133459999988754 34555666521 0 14544 99999999999988763
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.7e-10 Score=119.48 Aligned_cols=175 Identities=18% Similarity=0.101 Sum_probs=113.6
Q ss_pred cEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 373 LRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 373 ~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+.||++||.| ++...|...+..|+.. .++.++.+|.+.. + ...|
T Consensus 81 ~~vv~~HGgg~~~g~~~~~~~~~~~la~~--~g~~v~~~dyr~~-~-------------------------~~~~----- 127 (322)
T 3k6k_A 81 AHILYFHGGGYISGSPSTHLVLTTQLAKQ--SSATLWSLDYRLA-P-------------------------ENPF----- 127 (322)
T ss_dssp CEEEEECCSTTTSCCHHHHHHHHHHHHHH--HTCEEEEECCCCT-T-------------------------TSCT-----
T ss_pred eEEEEEcCCcccCCChHHHHHHHHHHHHh--cCCEEEEeeCCCC-C-------------------------CCCC-----
Confidence 3499999966 7888888555555432 2689999986611 0 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
....+++.+++++|.+. .......+|+|+|+||.+|+.++....+ .+...++++|++
T Consensus 128 ---------------------~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~-~~~~~~~~~vl~ 184 (322)
T 3k6k_A 128 ---------------------PAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKE-DGLPMPAGLVML 184 (322)
T ss_dssp ---------------------THHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHH-TTCCCCSEEEEE
T ss_pred ---------------------chHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHh-cCCCCceEEEEe
Confidence 01234556666666554 1123456899999999999999987653 223458999999
Q ss_pred cCCCCCccc----------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHH
Q 007311 530 SGFALHSAE----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKE 569 (608)
Q Consensus 530 sG~~~~~~~----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~ 569 (608)
+++...... ......-.|+|+++|+ +|.++ ..+++
T Consensus 185 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~---~D~~~--~~~~~ 259 (322)
T 3k6k_A 185 SPFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGS---EEALL--SDSTT 259 (322)
T ss_dssp SCCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEES---SCTTH--HHHHH
T ss_pred cCCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECC---cCccH--HHHHH
Confidence 998654211 0001223599999999 88774 57777
Q ss_pred HHHHhccC--CcEEEEeCC-CCcCCC-------ChhhHHHHHHHHHHhC
Q 007311 570 LAKAFEEG--CSVIIEHDC-GHIIPT-------RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 570 l~~~~~~~--~~~vv~~~g-GH~ip~-------~~~~~~~i~~Fl~~~L 608 (608)
+++.+... .++++.+++ ||.+.. ....++.+.+||++.|
T Consensus 260 ~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3k6k_A 260 LAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARI 308 (322)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHH
Confidence 77777642 356667765 998642 1246788999998754
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.24 E-value=6.1e-11 Score=121.89 Aligned_cols=101 Identities=14% Similarity=0.071 Sum_probs=67.6
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccC--CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKN--IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~--~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+.||||||+|.+...|. .+...|.+ +++++.+|.| .+. ...+..
T Consensus 38 ~p~lvllHG~~~~~~~w~----~~~~~L~~~~~~~via~Dl~--------GhG------------------~S~~~~--- 84 (316)
T 3c5v_A 38 GPVLLLLHGGGHSALSWA----VFTAAIISRVQCRIVALDLR--------SHG------------------ETKVKN--- 84 (316)
T ss_dssp SCEEEEECCTTCCGGGGH----HHHHHHHTTBCCEEEEECCT--------TST------------------TCBCSC---
T ss_pred CcEEEEECCCCcccccHH----HHHHHHhhcCCeEEEEecCC--------CCC------------------CCCCCC---
Confidence 457999999999999999 56666666 7999999988 111 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--C--CceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--G--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
. ....++..++.|.++++.. + ....|+||||||++|+.+|.+.. .+.+++
T Consensus 85 ------------~----------~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~----~p~v~~ 138 (316)
T 3c5v_A 85 ------------P----------EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNL----VPSLLG 138 (316)
T ss_dssp ------------T----------TCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTC----CTTEEE
T ss_pred ------------c----------cccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhcc----CCCcce
Confidence 0 0113455555666666554 2 34589999999999999998421 224888
Q ss_pred EEEecC
Q 007311 526 AILCSG 531 (608)
Q Consensus 526 vIlisG 531 (608)
+|++++
T Consensus 139 lvl~~~ 144 (316)
T 3c5v_A 139 LCMIDV 144 (316)
T ss_dssp EEEESC
T ss_pred EEEEcc
Confidence 888764
|
| >1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=5.6e-12 Score=134.17 Aligned_cols=98 Identities=18% Similarity=0.225 Sum_probs=75.6
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCC--------hhhhhccccCCCCccccCccccc-CCC-------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARN--------LYETRIGKFRTPSVETLDPEIRQ-FSD------- 192 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn--------~~E~~~Gh~~g~~~~~l~~~~~~-~~~------- 192 (608)
...|++++++++++ + ++|||||+ ..||+.|||+|+. +.+... +.+
T Consensus 13 ~~~Is~~el~~~l~--------------~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi----~ip~~~~l~~~~~~~~~ 73 (373)
T 1okg_A 13 KVFLDPSEVADHLA--------------E-YRIVDCRYSLKIKDHGSIQYAKEHVKSAI----RADVDTNLSKLVPTSTA 73 (373)
T ss_dssp CCEECHHHHTTCGG--------------G-SEEEECCCCSSSTTTTTTHHHHCEETTCE----ECCTTTTSCCCCTTCCC
T ss_pred CcEEcHHHHHHHcC--------------C-cEEEEecCCccccccchhHHhhCcCCCCE----EeCchhhhhcccccCCc
Confidence 46899999988773 2 89999999 6999999999954 333322 322
Q ss_pred ---ch------HHHHhhhhhcCCCeEEEEc-CCCccHH-HHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 193 ---LP------TWIDNNAEQLQGKHVLMYC-TGGIRCE-MASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 ---~~------~~~~~~~~~~k~k~Iv~yC-tgGiR~~-~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+| .++.+ +...++++||+|| .+|.|+. +|+..|+.. || ||++|.||+.+|.++
T Consensus 74 ~~~lp~~~~f~~~l~~-~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~--G~-~V~~L~GG~~aW~~~ 137 (373)
T 1okg_A 74 RHPLPPXAEFIDWCMA-NGMAGELPVLCYDDECGAMGGCRLWWMLNSL--GA-DAYVINGGFQACKAA 137 (373)
T ss_dssp SSCCCCHHHHHHHHHH-TTCSSSSCEEEECSSTTTTTHHHHHHHHHHH--TC-CEEEETTTTHHHHTT
T ss_pred cccCCCHHHHHHHHHH-cCCCCCCeEEEEeCCCCchHHHHHHHHHHHc--CC-eEEEeCCCHHHHHhh
Confidence 12 12222 3456899999999 8899997 999999987 99 999999999999875
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.1e-10 Score=118.70 Aligned_cols=177 Identities=14% Similarity=0.030 Sum_probs=117.0
Q ss_pred ccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 372 KLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 372 ~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
++.||++||.| ++...|...+..|+.. .++.++.+|.+.. + ...|
T Consensus 87 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~--~g~~V~~~dyr~~-p-------------------------~~~~---- 134 (326)
T 3ga7_A 87 QATLYYLHGGGFILGNLDTHDRIMRLLARY--TGCTVIGIDYSLS-P-------------------------QARY---- 134 (326)
T ss_dssp SCEEEEECCSTTTSCCTTTTHHHHHHHHHH--HCSEEEEECCCCT-T-------------------------TSCT----
T ss_pred CcEEEEECCCCcccCChhhhHHHHHHHHHH--cCCEEEEeeCCCC-C-------------------------CCCC----
Confidence 37899999999 8888888555555542 2789999987621 0 0011
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhC-CCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKG-EIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~-~~~l~ 524 (608)
....++..+++++|.+..... ....+|+|+||||.+|+.++.+..+... ...++
T Consensus 135 ----------------------~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 192 (326)
T 3ga7_A 135 ----------------------PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVI 192 (326)
T ss_dssp ----------------------THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEE
T ss_pred ----------------------CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCce
Confidence 012345666677766654432 2456899999999999999987654211 12488
Q ss_pred EEEEecCCCCCccc-----------------------------------------cccCCCCCCEEEEEcCCCCCCcccc
Q 007311 525 FAILCSGFALHSAE-----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 525 ~vIlisG~~~~~~~-----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp 563 (608)
++|+++++...... ........|+|++||+ .|++++
T Consensus 193 ~~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~---~D~~~~ 269 (326)
T 3ga7_A 193 AILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAE---FDPLID 269 (326)
T ss_dssp EEEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEET---TCTTHH
T ss_pred EEEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecC---cCcCHH
Confidence 99999887532210 0111345699999999 899884
Q ss_pred hHHHHHHHHHhccC--CcEEEEeCC-CCcCCCC-------hhhHHHHHHHHHHh
Q 007311 564 NQASKELAKAFEEG--CSVIIEHDC-GHIIPTR-------SPYIDEIKSFLQRF 607 (608)
Q Consensus 564 ~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~-------~~~~~~i~~Fl~~~ 607 (608)
.+.++++.+... .++++++++ +|.+... .+.++.+.+||.+.
T Consensus 270 --~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 321 (326)
T 3ga7_A 270 --DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMAR 321 (326)
T ss_dssp --HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHH
Confidence 677777777643 356777765 8987321 34678889998865
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4.6e-10 Score=115.77 Aligned_cols=179 Identities=15% Similarity=0.052 Sum_probs=117.3
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++||.| ++...|...+..|.+. .++.++.+|.+.. + ...|
T Consensus 77 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~--~G~~Vv~~d~rg~--------~------------------~~~~-- 126 (323)
T 1lzl_A 77 GPVPVLLWIHGGGFAIGTAESSDPFCVEVARE--LGFAVANVEYRLA--------P------------------ETTF-- 126 (323)
T ss_dssp SCEEEEEEECCSTTTSCCGGGGHHHHHHHHHH--HCCEEEEECCCCT--------T------------------TSCT--
T ss_pred CCCcEEEEECCCccccCChhhhHHHHHHHHHh--cCcEEEEecCCCC--------C------------------CCCC--
Confidence 3457899999999 8888888555555442 2689999997711 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
....+++..++++|.+.+...+ ...+|+|||+||.+|+.++.+..+ .+...+
T Consensus 127 ------------------------~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~-~~~~~~ 181 (323)
T 1lzl_A 127 ------------------------PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARD-EGVVPV 181 (323)
T ss_dssp ------------------------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH-HCSSCC
T ss_pred ------------------------CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhh-cCCCCe
Confidence 0123456677777777655443 345799999999999999987653 234568
Q ss_pred cEEEEecCCCCCccc-----------------------------c---------------ccCCCC--CCEEEEEcCCCC
Q 007311 524 RFAILCSGFALHSAE-----------------------------F---------------EHRSIN--CPSLHIFGGDLG 557 (608)
Q Consensus 524 ~~vIlisG~~~~~~~-----------------------------~---------------~~~~i~--~PvL~i~G~~~~ 557 (608)
+++|+++++...... . ....+. .|+|+++|+
T Consensus 182 ~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~P~li~~G~--- 258 (323)
T 1lzl_A 182 AFQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTME--- 258 (323)
T ss_dssp CEEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEET---
T ss_pred eEEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCcccCCCChhheEECC---
Confidence 999999976532210 0 000122 699999999
Q ss_pred CCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCC------hhhHHHHHHHHHHhC
Q 007311 558 NDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTR------SPYIDEIKSFLQRFL 608 (608)
Q Consensus 558 ~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~------~~~~~~i~~Fl~~~L 608 (608)
+|.++ ..+.++++.+... .++++++++ ||.+... ...++.+.+||++.|
T Consensus 259 ~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l 316 (323)
T 1lzl_A 259 LDPLR--DEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 316 (323)
T ss_dssp TCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred cCCch--HHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHh
Confidence 89887 3566666666532 367777765 8975321 246788999998754
|
| >1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=9.5e-12 Score=138.79 Aligned_cols=96 Identities=15% Similarity=0.125 Sum_probs=81.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++++.+++++ ++++|||||++.||+.|||+| +++.+ ..++...+.+ .+++++
T Consensus 376 ~~~i~~~~l~~~l~~-------------~~~~liDvR~~~e~~~ghIpg----A~~ip---~~~l~~~l~~---l~~~~~ 432 (539)
T 1yt8_A 376 ADTIDPTTLADWLGE-------------PGTRVLDFTASANYAKRHIPG----AAWVL---RSQLKQALER---LGTAER 432 (539)
T ss_dssp CCEECHHHHHHHTTS-------------TTEEEEECSCHHHHHHCBCTT----CEECC---GGGHHHHHHH---HCCCSE
T ss_pred CCccCHHHHHHHhcC-------------CCeEEEEeCCHHHhhcCcCCC----chhCC---HHHHHHHHHh---CCCCCe
Confidence 468999999999865 478999999999999999999 44443 2345554443 468999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.|+..|+..|++. ||++|++|.||+.+|.+.
T Consensus 433 ivv~C~sG~rs~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 471 (539)
T 1yt8_A 433 YVLTCGSSLLARFAVAEVQAL--SGKPVFLLDGGTSAWVAA 471 (539)
T ss_dssp EEEECSSSHHHHHHHHHHHHH--HCSCEEEETTHHHHHHHT
T ss_pred EEEEeCCChHHHHHHHHHHHc--CCCCEEEeCCcHHHHHhC
Confidence 999999999999999999998 999999999999999874
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=125.63 Aligned_cols=125 Identities=19% Similarity=0.321 Sum_probs=85.6
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-----------------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA----------------- 537 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~----------------- 537 (608)
+++.+++++|.+.........+|+||||||.+|+.+|.+. + .++++|++++......
T Consensus 223 ~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~-----p-~v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (446)
T 3hlk_A 223 EYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFL-----K-GITAAVVINGSVANVGGTLRYKGETLPPVGVNR 296 (446)
T ss_dssp HHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHC-----S-CEEEEEEESCCSBCCSSEEEETTEEECCCCBCG
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhC-----C-CceEEEEEcCcccccCCCccccCccCCccccch
Confidence 4455666665443322334668999999999999999854 2 3899999988642100
Q ss_pred ----------------------c------cccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhccC--C-cEEEEeC
Q 007311 538 ----------------------E------FEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEG--C-SVIIEHD 585 (608)
Q Consensus 538 ----------------------~------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~--~-~~vv~~~ 585 (608)
. .....+++|+|+++|+ +|.++|.+. ++++++.+... . .+++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~---~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~p 373 (446)
T 3hlk_A 297 NRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQ---DDHNWKSEFYANEACKRLQAHGRRKPQIICYP 373 (446)
T ss_dssp GGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEET---TCCSSCHHHHHHHHHHHHHHTTCCCCEEEEET
T ss_pred hccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeC---CCCCcChHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 0 0135688999999999 899999844 46777777642 2 5666665
Q ss_pred -CCCcCCC------------------------------ChhhHHHHHHHHHHhC
Q 007311 586 -CGHIIPT------------------------------RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 586 -gGH~ip~------------------------------~~~~~~~i~~Fl~~~L 608 (608)
+||.+.. ..+..+.+.+||++.|
T Consensus 374 gagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L 427 (446)
T 3hlk_A 374 ETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHL 427 (446)
T ss_dssp TBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 6999821 1235788999998765
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.21 E-value=4.4e-11 Score=133.32 Aligned_cols=184 Identities=15% Similarity=0.029 Sum_probs=119.3
Q ss_pred CccEEEEecCCCCC--hHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQN--ASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~n--a~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+.|.||++||.+.+ ...|......|++ .++.++.+|.|-.-. -+..|....
T Consensus 359 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~---~G~~v~~~d~rG~~~------------------------~G~s~~~~~ 411 (582)
T 3o4h_A 359 PGPTVVLVHGGPFAEDSDSWDTFAASLAA---AGFHVVMPNYRGSTG------------------------YGEEWRLKI 411 (582)
T ss_dssp SEEEEEEECSSSSCCCCSSCCHHHHHHHH---TTCEEEEECCTTCSS------------------------SCHHHHHTT
T ss_pred CCcEEEEECCCcccccccccCHHHHHHHh---CCCEEEEeccCCCCC------------------------CchhHHhhh
Confidence 66899999997766 6667633333433 479999999771100 022232210
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. ... .....+++.+++++|.+... ....+|+|||+||.+|+.++.+. +..++++|+
T Consensus 412 ~-------------~~~----~~~~~~d~~~~~~~l~~~~~--~d~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~ 467 (582)
T 3o4h_A 412 I-------------GDP----CGGELEDVSAAARWARESGL--ASELYIMGYSYGGYMTLCALTMK-----PGLFKAGVA 467 (582)
T ss_dssp T-------------TCT----TTHHHHHHHHHHHHHHHTTC--EEEEEEEEETHHHHHHHHHHHHS-----TTTSSCEEE
T ss_pred h-------------hhc----ccccHHHHHHHHHHHHhCCC--cceEEEEEECHHHHHHHHHHhcC-----CCceEEEEE
Confidence 0 000 00112344444444433211 12558999999999999999853 567999999
Q ss_pred ecCCCCCccc-----------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--
Q 007311 529 CSGFALHSAE-----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-- 577 (608)
Q Consensus 529 isG~~~~~~~-----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-- 577 (608)
+++....... .....+++|+|++||+ +|..+|.+.++++++.+...
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~---~D~~v~~~~~~~~~~~l~~~g~ 544 (582)
T 3o4h_A 468 GASVVDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQ---NASRTPLKPLLRLMGELLARGK 544 (582)
T ss_dssp ESCCCCHHHHHHTCCHHHHHHHHHHTTTCHHHHHHTCGGGGGGGCCSCEEEEEET---TCSSSCHHHHHHHHHHHHHTTC
T ss_pred cCCccCHHHHhhcccchhHHHHHHHcCcCHHHHHhcCHHHHHhcCCCCEEEEecC---CCCCcCHHHHHHHHHHHHhCCC
Confidence 9986543210 1245788999999999 89999999999999998752
Q ss_pred CcEEEEeC-CCCcCCCC---hhhHHHHHHHHHHhC
Q 007311 578 CSVIIEHD-CGHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 578 ~~~vv~~~-gGH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
..+++.++ +||.+... .+..+.+.+||.+.|
T Consensus 545 ~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l 579 (582)
T 3o4h_A 545 TFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 579 (582)
T ss_dssp CEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHc
Confidence 25666665 59998631 136788899998753
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.21 E-value=9.3e-11 Score=124.38 Aligned_cols=119 Identities=19% Similarity=0.106 Sum_probs=85.6
Q ss_pred cHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCC-CCCEEEE
Q 007311 476 GLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSI-NCPSLHI 551 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i-~~PvL~i 551 (608)
.+....+++..++...+ ...+|+||||||.+|+.++.+. +..++++|+++|...... ...+ .+|+|++
T Consensus 243 ~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~sg~~~~~~---~~~~~~~P~lii 314 (380)
T 3doh_A 243 PLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEF-----PELFAAAIPICGGGDVSK---VERIKDIPIWVF 314 (380)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC-----TTTCSEEEEESCCCCGGG---GGGGTTSCEEEE
T ss_pred hHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhC-----CccceEEEEecCCCChhh---hhhccCCCEEEE
Confidence 45555666666655543 2457999999999999999853 557999999999874432 2334 4899999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC---------CCcCCCChhhHH--HHHHHHHHh
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC---------GHIIPTRSPYID--EIKSFLQRF 607 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g---------GH~ip~~~~~~~--~i~~Fl~~~ 607 (608)
||+ +|..+|.+.++++++.+... ..+++.+++ ||.. ..+... .+.+||.+.
T Consensus 315 ~G~---~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~--~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 315 HAE---DDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGS--WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp EET---TCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCT--HHHHHTCHHHHHHHHTC
T ss_pred ecC---CCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchh--HHHhcCCHHHHHHHHhh
Confidence 999 89999999999999988742 356666665 4642 123334 888998753
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-11 Score=124.32 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=80.1
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------------------------------- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------------------------------- 538 (608)
...|+||||||.+|+.++.+. +..++++|++||.......
T Consensus 120 ~~~l~G~S~GG~~al~~a~~~-----p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p 194 (304)
T 1sfr_A 120 GSAVVGLSMAASSALTLAIYH-----PQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDP 194 (304)
T ss_dssp SEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCT
T ss_pred ceEEEEECHHHHHHHHHHHhC-----ccceeEEEEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCH
Confidence 558999999999999999854 5679999999998643210
Q ss_pred -cccCCC---CCCEEEEEcCCCCCCc--------------ccchHHHHHHHHHhccCC---cEEEEe-CCCCcCCCChhh
Q 007311 539 -FEHRSI---NCPSLHIFGGDLGNDR--------------QVANQASKELAKAFEEGC---SVIIEH-DCGHIIPTRSPY 596 (608)
Q Consensus 539 -~~~~~i---~~PvL~i~G~~~~~D~--------------~Vp~~~~~~l~~~~~~~~---~~vv~~-~gGH~ip~~~~~ 596 (608)
.....+ .+|+++++|+ +|+ .++.+.++++++.++... +++.++ +++|.+......
T Consensus 195 ~~~~~~l~~~~~pi~l~~G~---~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~~w~~~ 271 (304)
T 1sfr_A 195 LLNVGKLIANNTRVWVYCGN---GKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEYWGAQ 271 (304)
T ss_dssp TTTHHHHHHHTCEEEEECCC---SCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHHHHHHH
T ss_pred HHHHHHhhhcCCeEEEEecC---CCCccccccccccchhHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccCHHHHHHH
Confidence 000112 6899999999 787 678889999999887543 556665 679987654567
Q ss_pred HHHHHHHHHHhC
Q 007311 597 IDEIKSFLQRFL 608 (608)
Q Consensus 597 ~~~i~~Fl~~~L 608 (608)
+..+.+||.+.|
T Consensus 272 l~~~l~~l~~~l 283 (304)
T 1sfr_A 272 LNAMKPDLQRAL 283 (304)
T ss_dssp HHHTHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 788888887653
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=6.7e-10 Score=116.14 Aligned_cols=125 Identities=16% Similarity=0.114 Sum_probs=80.1
Q ss_pred ccHHHHHHHHHHHH--h--HhCC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------
Q 007311 475 DGLDVSLAYLKTIF--S--QEGP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i--~--~~~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------- 538 (608)
+++.+++++|.+.. . .... ..+|+|+||||.+|+.+|.+... ....++++|+++++......
T Consensus 167 ~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~--~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~ 244 (351)
T 2zsh_A 167 DDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE--SGIDVLGNILLNPMFGGNERTESEKSLDGKY 244 (351)
T ss_dssp HHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHT--TTCCCCEEEEESCCCCCSSCCHHHHHHTTTS
T ss_pred HHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhc--cCCCeeEEEEECCccCCCcCChhhhhcCCCc
Confidence 34555555555421 0 1223 56899999999999999987642 12479999999987532100
Q ss_pred ---------------------------------cccCCCCC-CEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEE
Q 007311 539 ---------------------------------FEHRSINC-PSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVII 582 (608)
Q Consensus 539 ---------------------------------~~~~~i~~-PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv 582 (608)
.....+.+ |+|+++|+ +|.+++ .++++++.+... .++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~---~D~~~~--~~~~~~~~l~~~g~~~~~~ 319 (351)
T 2zsh_A 245 FVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAG---LDLIRD--WQLAYAEGLKKAGQEVKLM 319 (351)
T ss_dssp SCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEET---TSTTHH--HHHHHHHHHHHTTCCEEEE
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcC---CCcchH--HHHHHHHHHHHcCCCEEEE
Confidence 01122355 99999999 899886 455666666531 36666
Q ss_pred EeC-CCCcCCC------ChhhHHHHHHHHHH
Q 007311 583 EHD-CGHIIPT------RSPYIDEIKSFLQR 606 (608)
Q Consensus 583 ~~~-gGH~ip~------~~~~~~~i~~Fl~~ 606 (608)
+++ +||.+.. ....++.|.+||.+
T Consensus 320 ~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 320 HLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 665 4998754 12367788888864
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.19 E-value=5.1e-10 Score=116.02 Aligned_cols=177 Identities=17% Similarity=0.136 Sum_probs=113.9
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++||.| ++...|......|++. .++.++.+|.+.. + ...|
T Consensus 78 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~--~g~~vv~~dyr~~-p-------------------------~~~~-- 127 (322)
T 3fak_A 78 QAGKAILYLHGGGYVMGSINTHRSMVGEISRA--SQAAALLLDYRLA-P-------------------------EHPF-- 127 (322)
T ss_dssp CTTCEEEEECCSTTTSCCHHHHHHHHHHHHHH--HTSEEEEECCCCT-T-------------------------TSCT--
T ss_pred CCccEEEEEcCCccccCChHHHHHHHHHHHHh--cCCEEEEEeCCCC-C-------------------------CCCC--
Confidence 3467899999966 6777777444444432 2689999987611 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....++..+++++|.+. .......+|+|+|+||.+|+.++.+..+ .+...++++
T Consensus 128 ------------------------~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~-~~~~~~~~~ 181 (322)
T 3fak_A 128 ------------------------PAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARD-QGLPMPASA 181 (322)
T ss_dssp ------------------------THHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHH-TTCCCCSEE
T ss_pred ------------------------CcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHh-cCCCCceEE
Confidence 01234555666666554 1123456899999999999999987653 234468999
Q ss_pred EEecCCCCCccc----------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH
Q 007311 527 ILCSGFALHSAE----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA 566 (608)
Q Consensus 527 IlisG~~~~~~~----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~ 566 (608)
|+++++...... ......-.|+|+++|+ .|.++ ..
T Consensus 182 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~---~D~~~--~~ 256 (322)
T 3fak_A 182 IPISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGR---DEVLL--DD 256 (322)
T ss_dssp EEESCCCCTTCCCTHHHHTTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEET---TSTTH--HH
T ss_pred EEECCEecCcCCCcCHHHhCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcC---cCccH--HH
Confidence 999988654211 0000112499999999 89774 56
Q ss_pred HHHHHHHhccC--CcEEEEeCC-CCcCCC-------ChhhHHHHHHHHHHh
Q 007311 567 SKELAKAFEEG--CSVIIEHDC-GHIIPT-------RSPYIDEIKSFLQRF 607 (608)
Q Consensus 567 ~~~l~~~~~~~--~~~vv~~~g-GH~ip~-------~~~~~~~i~~Fl~~~ 607 (608)
+.++++.+... .++++++++ +|.+.. ....++.+.+||++.
T Consensus 257 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3fak_A 257 SIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQ 307 (322)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHH
Confidence 77777777643 356677765 897642 134678889999865
|
| >2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-11 Score=121.18 Aligned_cols=94 Identities=23% Similarity=0.338 Sum_probs=72.8
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc----------cccCCCCccccCcccccCCCchHHHHh
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI----------GKFRTPSVETLDPEIRQFSDLPTWIDN 199 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~----------Gh~~g~~~~~l~~~~~~~~~~~~~~~~ 199 (608)
..++++|+.+ +++|||||++.||+. |||+| +++.+...+.+-.+.+.+
T Consensus 121 ~~i~~~e~~~------------------~~~liDvR~~~e~~~~~~~~~~~~~ghIpg----A~~ip~~~~~~~~e~~~~ 178 (230)
T 2eg4_A 121 WLLTADEAAR------------------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPG----SKNAPLELFLSPEGLLER 178 (230)
T ss_dssp GBCCHHHHHT------------------CSCEEECSCHHHHTTSCCCTTSSSCCBCTT----CEECCGGGGGCCTTHHHH
T ss_pred ceeCHHHHhh------------------CCeEEeCCCHHHcCcccCCCCCccCCCCCC----cEEcCHHHhCChHHHHHh
Confidence 4678877654 368999999999999 99999 555543333221111221
Q ss_pred hhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 200 NAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 200 ~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
....++++||+||.+|.|+..++..|++. | .||+.|.||+.+|.+.
T Consensus 179 -~~~~~~~~iv~~C~~G~rs~~a~~~L~~~--G-~~v~~~~Gg~~~W~~~ 224 (230)
T 2eg4_A 179 -LGLQPGQEVGVYCHSGARSAVAFFVLRSL--G-VRARNYLGSMHEWLQE 224 (230)
T ss_dssp -HTCCTTCEEEEECSSSHHHHHHHHHHHHT--T-CEEEECSSHHHHHHHT
T ss_pred -cCCCCCCCEEEEcCChHHHHHHHHHHHHc--C-CCcEEecCcHHHHhhc
Confidence 23568999999999999999999999997 9 8999999999999875
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-10 Score=114.55 Aligned_cols=162 Identities=15% Similarity=0.141 Sum_probs=105.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||+|+++..|. .+.+.|...++++.+|.|- + .
T Consensus 22 ~~~l~~~hg~~~~~~~~~----~~~~~l~~~~~v~~~d~~g-----------------------------~---~----- 60 (244)
T 2cb9_A 22 GKNLFCFPPISGFGIYFK----DLALQLNHKAAVYGFHFIE-----------------------------E---D----- 60 (244)
T ss_dssp SSEEEEECCTTCCGGGGH----HHHHHTTTTSEEEEECCCC-----------------------------S---T-----
T ss_pred CCCEEEECCCCCCHHHHH----HHHHHhCCCceEEEEcCCC-----------------------------H---H-----
Confidence 457999999999999999 8888888889999998660 0 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. ..+.+.+.+... .....|+|||+||.+|+.+|.+.+. ....+.++|++
T Consensus 61 ------------------------~---~~~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~--~~~~v~~lvl~ 111 (244)
T 2cb9_A 61 ------------------------S---RIEQYVSRITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQ--KGLEVSDFIIV 111 (244)
T ss_dssp ------------------------T---HHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHH--TTCCEEEEEEE
T ss_pred ------------------------H---HHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHH--cCCCccEEEEE
Confidence 0 111222333332 1234899999999999999987652 24568899999
Q ss_pred cCCCCCcc-------c----------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHh
Q 007311 530 SGFALHSA-------E----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAF 574 (608)
Q Consensus 530 sG~~~~~~-------~----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~ 574 (608)
+++.+... . .....+++|+++++|+. .+|. ++.+....+.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~-~~D~-~~~~~~~~w~~~~ 189 (244)
T 2cb9_A 112 DAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRCYQEYWAQLINEGRIKSNIHFIEAGI-QTET-SGAMVLQKWQDAA 189 (244)
T ss_dssp SCCCCCSCCCCC-------CCSCHHHHHHHTHHHHHHHHHHHHCCCCSCBSSEEEEEECSB-CSCC-CHHHHTTSSGGGB
T ss_pred cCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCCEEEEEccC-cccc-ccccchhHHHHhc
Confidence 87765210 0 02357889999999971 1255 4444444454444
Q ss_pred ccCCcEEEEeCCCC--cCCCC--hhhHHHHHHHHHH
Q 007311 575 EEGCSVIIEHDCGH--IIPTR--SPYIDEIKSFLQR 606 (608)
Q Consensus 575 ~~~~~~vv~~~gGH--~ip~~--~~~~~~i~~Fl~~ 606 (608)
.. ...++..++|| ++... ....+.|.+||.+
T Consensus 190 ~~-~~~~~~i~ggH~~~~~~~~~~~~~~~i~~~L~~ 224 (244)
T 2cb9_A 190 EE-GYAEYTGYGAHKDMLEGEFAEKNANIILNILDK 224 (244)
T ss_dssp SS-CEEEEECSSBGGGTTSHHHHHHHHHHHHHHHHT
T ss_pred CC-CCEEEEecCChHHHcChHHHHHHHHHHHHHHhc
Confidence 33 37788888999 55431 1244556666653
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=118.31 Aligned_cols=178 Identities=15% Similarity=0.073 Sum_probs=115.8
Q ss_pred CCccEEEEecC---CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHG---FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG---~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++|| ++++...|......|++. .++.++.+|.+.. + ...|
T Consensus 72 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~--~g~~v~~~d~rg~--------~------------------~~~~-- 121 (310)
T 2hm7_A 72 PPYPALVYYHGGSWVVGDLETHDPVCRVLAKD--GRAVVFSVDYRLA--------P------------------EHKF-- 121 (310)
T ss_dssp SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH--HTSEEEEECCCCT--------T------------------TSCT--
T ss_pred CCCCEEEEECCCccccCChhHhHHHHHHHHHh--cCCEEEEeCCCCC--------C------------------CCCC--
Confidence 44678999999 889999888544444432 1689999987611 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
....+++.+++++|.+.....+ ...+|+|||+||.+|+.++.+.++ .+...+
T Consensus 122 ------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~-~~~~~v 176 (310)
T 2hm7_A 122 ------------------------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKE-RGGPAL 176 (310)
T ss_dssp ------------------------THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHH-TTCCCC
T ss_pred ------------------------CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHh-cCCCCc
Confidence 0123456667777766654432 345799999999999999987653 123468
Q ss_pred cEEEEecCCCCCc--cc------------------------------------------cccCCCCCCEEEEEcCCCCCC
Q 007311 524 RFAILCSGFALHS--AE------------------------------------------FEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 524 ~~vIlisG~~~~~--~~------------------------------------------~~~~~i~~PvL~i~G~~~~~D 559 (608)
+++|+++++.... .. .....+ .|+|+++|+ +|
T Consensus 177 ~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~---~D 252 (310)
T 2hm7_A 177 AFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQ---YD 252 (310)
T ss_dssp CCEEEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEE---EC
T ss_pred eEEEEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEec---CC
Confidence 9999998865432 00 001111 399999999 89
Q ss_pred cccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCC----C---hhhHHHHHHHHHHhC
Q 007311 560 RQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPT----R---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~----~---~~~~~~i~~Fl~~~L 608 (608)
.++ ..++++++.+... .++++++++ ||.+.. . .+.++.+.+||++.|
T Consensus 253 ~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 253 PLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp TTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred Cch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 887 4567777766542 256666655 996542 1 246788899998753
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=119.25 Aligned_cols=56 Identities=20% Similarity=0.124 Sum_probs=38.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC-----hhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR-----SPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~-----~~~~~~i~~Fl~~~ 607 (608)
.+++|+|+++|+ +|.++|. .++++ ... .++++.+ +||..... ..+.+.|.+||++.
T Consensus 292 ~i~~P~Lii~G~---~D~~~p~-~~~~l----~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 292 GILVPTIAFVSE---RFGIQIF-DSKIL----PSN-SEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp TCCCCEEEEEET---TTHHHHB-CGGGS----CTT-CEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred cCCCCEEEEecC---CCCCCcc-chhhh----ccC-ceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 788999999999 8987663 33222 233 5655554 59986432 24678899998763
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-10 Score=120.27 Aligned_cols=180 Identities=12% Similarity=0.025 Sum_probs=117.0
Q ss_pred CccEEEEecCCC---CChH--HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeee
Q 007311 371 RKLRILCLHGFR---QNAS--SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWF 445 (608)
Q Consensus 371 ~~~~iLlLHG~G---~na~--~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 445 (608)
..+.||++||.| ++.. .|......|++ .++.++.+|.+..-. +
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~---~g~~vv~~d~r~~gg--------------------------~--- 155 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA---AGSVVVMVDFRNAWT--------------------------A--- 155 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHH---TTCEEEEEECCCSEE--------------------------T---
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHh---CCCEEEEEecCCCCC--------------------------C---
Confidence 457899999988 7777 77743444433 579999999771100 0
Q ss_pred ccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 446 VAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
. +. .. +.....++..++++|.+.+...+ ...+|+|+|+||.+|+.++........+..++
T Consensus 156 ~-~~-------------~~-----~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~ 216 (361)
T 1jkm_A 156 E-GH-------------HP-----FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAID 216 (361)
T ss_dssp T-EE-------------CC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCS
T ss_pred C-CC-------------CC-----CCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcc
Confidence 0 00 00 00123456777888887776543 35689999999999999998643211233699
Q ss_pred EEEEecCCCCCc---------c-------------------------------------------ccccCCCCCCEEEEE
Q 007311 525 FAILCSGFALHS---------A-------------------------------------------EFEHRSINCPSLHIF 552 (608)
Q Consensus 525 ~vIlisG~~~~~---------~-------------------------------------------~~~~~~i~~PvL~i~ 552 (608)
++|+++++.... . ......+. |+|+++
T Consensus 217 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~ 295 (361)
T 1jkm_A 217 GVYASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAV 295 (361)
T ss_dssp EEEEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEE
T ss_pred eEEEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEE
Confidence 999999876440 0 00112344 999999
Q ss_pred cCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCC-CC--------hhhHHHHHHHHHHh
Q 007311 553 GGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIP-TR--------SPYIDEIKSFLQRF 607 (608)
Q Consensus 553 G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip-~~--------~~~~~~i~~Fl~~~ 607 (608)
|+ +|.+++ .++++++.+... .++++++++ ||.+. .. ...++.+.+||++.
T Consensus 296 G~---~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 296 NE---LDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp ET---TCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred cC---cCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 99 899987 677777777642 356666655 99875 21 23567888888753
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.16 E-value=5e-10 Score=113.06 Aligned_cols=172 Identities=17% Similarity=0.200 Sum_probs=108.5
Q ss_pred CccEEEEecCCC---CChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 371 RKLRILCLHGFR---QNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 371 ~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..+.||+|||.| ++.+.|.. .+.+.+. .++.++.+|.+.. | ...
T Consensus 26 ~~p~iv~~HGGg~~~g~~~~~~~---~~~~~l~~~g~~Vi~vdYrla-P-------------------------e~~--- 73 (274)
T 2qru_A 26 PTNYVVYLHGGGMIYGTKSDLPE---ELKELFTSNGYTVLALDYLLA-P-------------------------NTK--- 73 (274)
T ss_dssp SCEEEEEECCSTTTSCCGGGCCH---HHHHHHHTTTEEEEEECCCCT-T-------------------------TSC---
T ss_pred CCcEEEEEeCccccCCChhhchH---HHHHHHHHCCCEEEEeCCCCC-C-------------------------CCC---
Confidence 457899999988 66666531 2333333 4699999998721 0 000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
+....++..+++++|.+...+ .....|+|+|+||.+|+.++.+.. .....++++
T Consensus 74 -----------------------~p~~~~D~~~al~~l~~~~~~-~~~i~l~G~SaGG~lA~~~a~~~~--~~~~~~~~~ 127 (274)
T 2qru_A 74 -----------------------IDHILRTLTETFQLLNEEIIQ-NQSFGLCGRSAGGYLMLQLTKQLQ--TLNLTPQFL 127 (274)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHTTT-TCCEEEEEETHHHHHHHHHHHHHH--HTTCCCSCE
T ss_pred -----------------------CcHHHHHHHHHHHHHHhcccc-CCcEEEEEECHHHHHHHHHHHHHh--cCCCCceEE
Confidence 011234455555555443221 445689999999999999997542 224567788
Q ss_pred EEecCCCCCcc----------------------------c-------------------------------------ccc
Q 007311 527 ILCSGFALHSA----------------------------E-------------------------------------FEH 541 (608)
Q Consensus 527 IlisG~~~~~~----------------------------~-------------------------------------~~~ 541 (608)
|+++|+..... . ...
T Consensus 128 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (274)
T 2qru_A 128 VNFYGYTDLEFIKEPRKLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETL 207 (274)
T ss_dssp EEESCCSCSGGGGSCCCSCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHH
T ss_pred EEEcccccccccCCchhhccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhh
Confidence 88765432000 0 000
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hh----HHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PY----IDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~----~~~i~~Fl~~ 606 (608)
..+ .|+|+++|+ +|+.++...++++++.+.+ ++++++ +++|.+.... ++ ++.+.+||++
T Consensus 208 ~~l-pP~li~~G~---~D~~~~~~~~~~l~~~~~~--~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 208 KTF-PPCFSTASS---SDEEVPFRYSKKIGRTIPE--STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HTS-CCEEEEEET---TCSSSCTHHHHHHHHHSTT--CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred cCC-CCEEEEEec---CCCCcCHHHHHHHHHhCCC--cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 122 599999999 8999999999999998876 555555 4599874321 22 6777888864
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.6e-10 Score=115.38 Aligned_cols=176 Identities=11% Similarity=0.017 Sum_probs=113.1
Q ss_pred CCccEEEEecC---CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHG---FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG---~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++|| ++++...|......|++. .++.++.+|.+.. + ...+
T Consensus 88 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~--~g~~Vv~~Dyrg~--------~------------------~~~~-- 137 (323)
T 3ain_A 88 GPYGVLVYYHGGGFVLGDIESYDPLCRAITNS--CQCVTISVDYRLA--------P------------------ENKF-- 137 (323)
T ss_dssp SCCCEEEEECCSTTTSCCTTTTHHHHHHHHHH--HTSEEEEECCCCT--------T------------------TSCT--
T ss_pred CCCcEEEEECCCccccCChHHHHHHHHHHHHh--cCCEEEEecCCCC--------C------------------CCCC--
Confidence 34578999999 558888888444444432 1689999987611 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
....++..+++++|.+..... ....+|+|+||||.+|+.++.+..+.. ... +
T Consensus 138 ------------------------p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~-~~~-~ 191 (323)
T 3ain_A 138 ------------------------PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKEN-IKL-K 191 (323)
T ss_dssp ------------------------THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTT-CCC-S
T ss_pred ------------------------cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcC-CCc-e
Confidence 012345666777777666543 345689999999999999998765321 123 8
Q ss_pred EEEEecCCCCCccc-----------------------------------------cccCCCCCCEEEEEcCCCCCCcccc
Q 007311 525 FAILCSGFALHSAE-----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 525 ~vIlisG~~~~~~~-----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp 563 (608)
++|+++++...... .....+ .|+|+++|+ +|++++
T Consensus 192 ~~vl~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~---~D~l~~ 267 (323)
T 3ain_A 192 YQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAE---HDPLRD 267 (323)
T ss_dssp EEEEESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEET---TCTTHH
T ss_pred eEEEEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECC---CCccHH
Confidence 89999887542100 001111 399999999 899874
Q ss_pred hHHHHHHHHHhccC--CcEEEEeCC-CCcCCCC-------hhhHHHHHHHHHHh
Q 007311 564 NQASKELAKAFEEG--CSVIIEHDC-GHIIPTR-------SPYIDEIKSFLQRF 607 (608)
Q Consensus 564 ~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~-------~~~~~~i~~Fl~~~ 607 (608)
.+.++++.+... .++++++++ +|.+... ...++.+.+||++.
T Consensus 268 --~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 268 --QGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp --HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 556666666532 356666765 8986431 24678888998765
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=117.62 Aligned_cols=106 Identities=16% Similarity=0.156 Sum_probs=77.7
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------------------------c---
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------------------------F--- 539 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------------------------~--- 539 (608)
...|+||||||.+|+.++++. +..++++|++||....... .
T Consensus 115 ~~~l~G~S~GG~~al~~a~~~-----p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p 189 (280)
T 1dqz_A 115 GNAAVGLSMSGGSALILAAYY-----PQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDP 189 (280)
T ss_dssp SCEEEEETHHHHHHHHHHHHC-----TTTCSEEEEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCT
T ss_pred ceEEEEECHHHHHHHHHHHhC-----CchheEEEEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCH
Confidence 558999999999999999854 5679999999998754210 0
Q ss_pred --ccCC---CCCCEEEEEcCCCCCCc--------------ccchHHHHHHHHHhccCC---cEEEEe-CCCCcCCCChhh
Q 007311 540 --EHRS---INCPSLHIFGGDLGNDR--------------QVANQASKELAKAFEEGC---SVIIEH-DCGHIIPTRSPY 596 (608)
Q Consensus 540 --~~~~---i~~PvL~i~G~~~~~D~--------------~Vp~~~~~~l~~~~~~~~---~~vv~~-~gGH~ip~~~~~ 596 (608)
...+ ..+|+++.+|+ .|. .++.+.++++++.+.... .++.++ +++|........
T Consensus 190 ~~~~~~l~~~~~~~~l~~G~---~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~~w~~~ 266 (280)
T 1dqz_A 190 MVQIPRLVANNTRIWVYCGN---GTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSWPYWNEQ 266 (280)
T ss_dssp TTTHHHHHHHTCEEEEECCC---SCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeCC---CCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccChHHHHHH
Confidence 0011 25899999999 786 578888999999887543 455554 679987555567
Q ss_pred HHHHHHHHHHh
Q 007311 597 IDEIKSFLQRF 607 (608)
Q Consensus 597 ~~~i~~Fl~~~ 607 (608)
+..+..||.+.
T Consensus 267 l~~~l~~l~~~ 277 (280)
T 1dqz_A 267 LVAMKADIQHV 277 (280)
T ss_dssp HHHTHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777654
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1e-10 Score=121.89 Aligned_cols=171 Identities=18% Similarity=0.242 Sum_probs=120.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.|+|+||+++++..|. .|.+.|...++++.+|.|-. . . ...
T Consensus 101 ~~~l~~lhg~~~~~~~~~----~l~~~L~~~~~v~~~d~~g~--------~------------------~-~~~------ 143 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFS----VLSRYLDPQWSIIGIQSPRP--------N------------------G-PMQ------ 143 (329)
T ss_dssp SCEEEEECCTTSCCGGGG----GGGGTSCTTCEEEEECCCTT--------T------------------S-HHH------
T ss_pred CCcEEEEeCCcccchHHH----HHHHhcCCCCeEEEeeCCCC--------C------------------C-CCC------
Confidence 457999999999999999 88888888899999998710 0 0 000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
...++++..+.+.+.+... +++ .|+|||+||.+|+.+|.+.+ ..+..+.++|+
T Consensus 144 ---------------------~~~~~~~~a~~~~~~i~~~~~~~~~-~l~G~S~Gg~ia~~~a~~L~--~~~~~v~~lvl 199 (329)
T 3tej_A 144 ---------------------TAANLDEVCEAHLATLLEQQPHGPY-YLLGYSLGGTLAQGIAARLR--ARGEQVAFLGL 199 (329)
T ss_dssp ---------------------HCSSHHHHHHHHHHHHHHHCSSSCE-EEEEETHHHHHHHHHHHHHH--HTTCCEEEEEE
T ss_pred ---------------------CCCCHHHHHHHHHHHHHHhCCCCCE-EEEEEccCHHHHHHHHHHHH--hcCCcccEEEE
Confidence 0123555555555555543 344 89999999999999998754 23667999999
Q ss_pred ecCCCCCcc------------c-----------------------------------------cccCCCCCCEEEEEcCC
Q 007311 529 CSGFALHSA------------E-----------------------------------------FEHRSINCPSLHIFGGD 555 (608)
Q Consensus 529 isG~~~~~~------------~-----------------------------------------~~~~~i~~PvL~i~G~~ 555 (608)
+.++++... + .....+.+|+++++|+
T Consensus 200 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~- 278 (329)
T 3tej_A 200 LDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAE- 278 (329)
T ss_dssp ESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEG-
T ss_pred eCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEec-
Confidence 998876421 0 0134567899999999
Q ss_pred CCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 556 LGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 556 ~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
.|..++......+.....+ .+++..++||+....++..+.+.+.|.++|
T Consensus 279 --~d~~~~~~~~~~w~~~~~~--~~~~~v~g~H~~~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 279 --RTLQEGMSPERAWSPWIAE--LDIYRQDCAHVDIISPGTFEKIGPIIRATL 327 (329)
T ss_dssp --GGCCTTCCHHHHHTTTEEE--EEEEEESSCGGGGGSTTTHHHHHHHHHHHH
T ss_pred --cCCCCCCCchhhHHHhcCC--cEEEEecCChHHhCCChHHHHHHHHHHHHh
Confidence 7877766666667666644 777888999984444455666666666553
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.14 E-value=6.7e-11 Score=120.83 Aligned_cols=177 Identities=11% Similarity=0.048 Sum_probs=113.8
Q ss_pred CCccEEEEecC---CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHG---FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG---~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...|.||++|| .+.+...|......|++ .++.++.+|.+.. + ...|
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~r~~--------~------------------~~~~-- 128 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSMSCSIVGPLVR---RGYRVAVMDYNLC--------P------------------QVTL-- 128 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGGSCTTHHHHHH---TTCEEEEECCCCT--------T------------------TSCH--
T ss_pred CCCCEEEEECCCcCcCCChhHHHHHHHHHHh---CCCEEEEecCCCC--------C------------------CCCh--
Confidence 45689999999 44666666633333433 4799999986611 0 0011
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCC---CC
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGE---ID 522 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~---~~ 522 (608)
.....++..++++|.+.....+ ...+|+|||+||.+|+.++...... .. ..
T Consensus 129 ------------------------~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~-~~p~~~~ 183 (303)
T 4e15_A 129 ------------------------EQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVI-TAQRSKM 183 (303)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTS-CHHHHHT
T ss_pred ------------------------hHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccc-cCccccc
Confidence 1123456777777777555543 4568999999999999988632100 01 26
Q ss_pred ccEEEEecCCCCCccc--------------------------cccCC----CCCCEEEEEcCCCCCCcccchHHHHHHHH
Q 007311 523 FRFAILCSGFALHSAE--------------------------FEHRS----INCPSLHIFGGDLGNDRQVANQASKELAK 572 (608)
Q Consensus 523 l~~vIlisG~~~~~~~--------------------------~~~~~----i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~ 572 (608)
++++|+++|....... ..... +.+|+|++||+ +|.+++.+.++++++
T Consensus 184 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~---~D~~v~~~~~~~~~~ 260 (303)
T 4e15_A 184 VWALIFLCGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAE---HDSTTFIEQSRHYAD 260 (303)
T ss_dssp EEEEEEESCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEE---ESCHHHHHHHHHHHH
T ss_pred ccEEEEEeeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeC---CCCCCchHHHHHHHH
Confidence 9999999998643210 01112 28999999999 899999999999999
Q ss_pred HhccC--CcEEEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 573 AFEEG--CSVIIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 573 ~~~~~--~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.+... .+++++++ +||+...+. +....+.+||.
T Consensus 261 ~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 298 (303)
T 4e15_A 261 VLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLR 298 (303)
T ss_dssp HHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHH
T ss_pred HHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHH
Confidence 88742 35666665 489633211 23445566654
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=4.2e-10 Score=115.74 Aligned_cols=177 Identities=15% Similarity=0.050 Sum_probs=113.3
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++||.| ++...|......|++. .++.++.+|.+.. + ...+ .
T Consensus 77 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~--~g~~Vv~~dyrg~--------g------------------~~~~-p 127 (311)
T 1jji_A 77 PDSPVLVYYHGGGFVICSIESHDALCRRIARL--SNSTVVSVDYRLA--------P------------------EHKF-P 127 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH--HTSEEEEEECCCT--------T------------------TSCT-T
T ss_pred CCceEEEEECCcccccCChhHhHHHHHHHHHH--hCCEEEEecCCCC--------C------------------CCCC-C
Confidence 4467899999999 8888888444444422 3689999997711 0 0000 0
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
...+++.+++++|.+.+...+ ...+|+|+|+||.+|+.++.+..+ .+...+
T Consensus 128 -------------------------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~-~~~~~~ 181 (311)
T 1jji_A 128 -------------------------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARD-SGEDFI 181 (311)
T ss_dssp -------------------------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH-TTCCCE
T ss_pred -------------------------CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHh-cCCCCc
Confidence 123456777888877766543 255899999999999999987653 224569
Q ss_pred cEEEEecCCCCCccc-----------------------------------------cccCCCCCCEEEEEcCCCCCCccc
Q 007311 524 RFAILCSGFALHSAE-----------------------------------------FEHRSINCPSLHIFGGDLGNDRQV 562 (608)
Q Consensus 524 ~~vIlisG~~~~~~~-----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~V 562 (608)
+++|+++++...... ...-..-.|+|+++|+ +|.++
T Consensus 182 ~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~li~~G~---~D~l~ 258 (311)
T 1jji_A 182 KHQILIYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAE---YDPLR 258 (311)
T ss_dssp EEEEEESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEE---ECTTH
T ss_pred eEEEEeCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCCChheEEEcC---cCcch
Confidence 999999987532100 0000112599999999 89987
Q ss_pred chHHHHHHHHHhcc--CCcEEEEeCC-CCcCCCC-------hhhHHHHHHHHHH
Q 007311 563 ANQASKELAKAFEE--GCSVIIEHDC-GHIIPTR-------SPYIDEIKSFLQR 606 (608)
Q Consensus 563 p~~~~~~l~~~~~~--~~~~vv~~~g-GH~ip~~-------~~~~~~i~~Fl~~ 606 (608)
+ .+.++++.+.. ..++++++++ +|.+... ...++.+.+||++
T Consensus 259 ~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 259 D--EGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp H--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred H--HHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 5 44555555543 1266666665 8976431 2356777777764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3.4e-10 Score=127.71 Aligned_cols=182 Identities=10% Similarity=0.015 Sum_probs=118.0
Q ss_pred CCccEEEEecCCCCChH--HHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNAS--SFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~--~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
.+.|.||++||.+.+.. .|. .+...|. .++.++.+|.+-.- .-+..|..
T Consensus 422 ~~~p~vv~~HG~~~~~~~~~~~----~~~~~l~~~G~~v~~~d~rG~~------------------------~~G~~~~~ 473 (662)
T 3azo_A 422 ELPPYVVMAHGGPTSRVPAVLD----LDVAYFTSRGIGVADVNYGGST------------------------GYGRAYRE 473 (662)
T ss_dssp CCCCEEEEECSSSSSCCCCSCC----HHHHHHHTTTCEEEEEECTTCS------------------------SSCHHHHH
T ss_pred CCccEEEEECCCCCccCcccch----HHHHHHHhCCCEEEEECCCCCC------------------------CccHHHHH
Confidence 45688999999987765 566 3444443 47999999977110 01223332
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
.. ...+. ...+++..+.+..+++. .....+|+|+|+||.+|+.++.. +..+
T Consensus 474 ~~-------------~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~------~~~~ 527 (662)
T 3azo_A 474 RL-------------RGRWG-------VVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS------TDVY 527 (662)
T ss_dssp TT-------------TTTTT-------THHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH------CCCC
T ss_pred hh-------------ccccc-------cccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC------cCce
Confidence 10 00000 01233333444444433 23456899999999999998863 4578
Q ss_pred cEEEEecCCCCCcc---------------------------------ccccCCCCCCEEEEEcCCCCCCcccchHHHHHH
Q 007311 524 RFAILCSGFALHSA---------------------------------EFEHRSINCPSLHIFGGDLGNDRQVANQASKEL 570 (608)
Q Consensus 524 ~~vIlisG~~~~~~---------------------------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l 570 (608)
+++|++++...... ......+++|+|++||+ +|..+|.+.++++
T Consensus 528 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~---~D~~vp~~~~~~~ 604 (662)
T 3azo_A 528 ACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGL---EDPVCPPEQCDRF 604 (662)
T ss_dssp SEEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEET---TCSSSCTHHHHHH
T ss_pred EEEEecCCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeC---CCCCCCHHHHHHH
Confidence 99999988642100 01235678999999999 8999999999999
Q ss_pred HHHhccC--CcEEEEeC-CCCcCCCC---hhhHHHHHHHHHHhC
Q 007311 571 AKAFEEG--CSVIIEHD-CGHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 571 ~~~~~~~--~~~vv~~~-gGH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
++.+... ..++++++ .||.+... ....+.+.+||.+.|
T Consensus 605 ~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 605 LEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVF 648 (662)
T ss_dssp HHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 9999863 24666665 59987432 236788899998764
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-09 Score=113.24 Aligned_cols=175 Identities=15% Similarity=0.061 Sum_probs=107.2
Q ss_pred CccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..+.||++||.| ++...|...+..|... .++.++.+|.+.. + ...+
T Consensus 95 ~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~--~g~~vi~~D~r~~-~-------------------------~~~~--- 143 (326)
T 3d7r_A 95 IDKKILYIHGGFNALQPSPFHWRLLDKITLS--TLYEVVLPIYPKT-P-------------------------EFHI--- 143 (326)
T ss_dssp CSSEEEEECCSTTTSCCCHHHHHHHHHHHHH--HCSEEEEECCCCT-T-------------------------TSCH---
T ss_pred CCeEEEEECCCcccCCCCHHHHHHHHHHHHH--hCCEEEEEeCCCC-C-------------------------CCCc---
Confidence 357899999954 5777787555555433 2689999996610 0 0000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
....+++.+.+++|.+.+ .....+|+|+||||.+|+.+|.+.+. .+...++++|
T Consensus 144 -----------------------~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~GG~lAl~~a~~~~~-~~~~~v~~lv 197 (326)
T 3d7r_A 144 -----------------------DDTFQAIQRVYDQLVSEV--GHQNVVVMGDGSGGALALSFVQSLLD-NQQPLPNKLY 197 (326)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHH--CGGGEEEEEETHHHHHHHHHHHHHHH-TTCCCCSEEE
T ss_pred -----------------------hHHHHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHHHHh-cCCCCCCeEE
Confidence 011234455555554442 22346899999999999999987653 2235689999
Q ss_pred EecCCCCCcc-------c----------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH
Q 007311 528 LCSGFALHSA-------E----------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA 566 (608)
Q Consensus 528 lisG~~~~~~-------~----------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~ 566 (608)
+++++..... . ......-.|+|+++|+ +|..+ ..
T Consensus 198 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~~--~~ 272 (326)
T 3d7r_A 198 LISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGG---REMTH--PD 272 (326)
T ss_dssp EESCCCCTTCCCTTCCHHHHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEET---TSTTH--HH
T ss_pred EECcccccCcCChhHHhhhcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeC---cccch--HH
Confidence 9998754210 0 0000112499999999 78644 34
Q ss_pred HHHHHHHhccC--CcEEEEeC-CCCcCCC---C--hhhHHHHHHHHHHh
Q 007311 567 SKELAKAFEEG--CSVIIEHD-CGHIIPT---R--SPYIDEIKSFLQRF 607 (608)
Q Consensus 567 ~~~l~~~~~~~--~~~vv~~~-gGH~ip~---~--~~~~~~i~~Fl~~~ 607 (608)
+.++++.+... .+++++++ +||.++. . ...++.+.+||.+.
T Consensus 273 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~ 321 (326)
T 3d7r_A 273 MKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDED 321 (326)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHH
Confidence 55555555432 25666665 4898654 1 23677888888754
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-10 Score=130.51 Aligned_cols=107 Identities=15% Similarity=0.089 Sum_probs=82.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-------------------------ccccCCCCCCE
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-------------------------EFEHRSINCPS 548 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-------------------------~~~~~~i~~Pv 548 (608)
..+|+||||||.+|+.+|.+. +..++++|++++...... ......+++|+
T Consensus 570 ~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 644 (706)
T 2z3z_A 570 RIGVHGWSYGGFMTTNLMLTH-----GDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRL 644 (706)
T ss_dssp EEEEEEETHHHHHHHHHHHHS-----TTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEE
T ss_pred heEEEEEChHHHHHHHHHHhC-----CCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCE
Confidence 457999999999999999854 457899999988653210 01245788999
Q ss_pred EEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC--hhhHHHHHHHHHHhC
Q 007311 549 LHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR--SPYIDEIKSFLQRFL 608 (608)
Q Consensus 549 L~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~--~~~~~~i~~Fl~~~L 608 (608)
|++||+ +|..+|.+.++++++.+... ..++++++ .||.+... ....+.+.+||.+.|
T Consensus 645 lii~G~---~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 645 MLIHGA---IDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDHL 706 (706)
T ss_dssp EEEEET---TCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHHC
T ss_pred EEEeeC---CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHhC
Confidence 999999 89999999999999988642 24666665 59998654 346788999998865
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.3e-10 Score=112.73 Aligned_cols=192 Identities=11% Similarity=0.030 Sum_probs=107.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..++.||+|||+|.+...|.. .+.+.+. .++.++.+|.+...- +...|+...
T Consensus 52 ~~~p~vv~lHG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~~~~~------------------------p~~~~~~~g 104 (304)
T 3d0k_A 52 PDRPVVVVQHGVLRNGADYRD---FWIPAADRHKLLIVAPTFSDEIW------------------------PGVESYNNG 104 (304)
T ss_dssp TTSCEEEEECCTTCCHHHHHH---HTHHHHHHHTCEEEEEECCTTTS------------------------CHHHHTTTT
T ss_pred CCCcEEEEeCCCCCCHHHHHH---HHHHHHHHCCcEEEEeCCccccC------------------------CCccccccC
Confidence 346799999999999988832 3333333 379999999883200 012232210
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.. +...+... +.. ....+++.+.+++|.+.........+|+||||||.+|+.++...+ ...++++|+
T Consensus 105 ~~-------~g~s~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p----~~~~~~~vl 171 (304)
T 3d0k_A 105 RA-------FTAAGNPR-HVD-GWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQP----HAPFHAVTA 171 (304)
T ss_dssp TC-------BCTTSCBC-CGG-GSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSC----STTCSEEEE
T ss_pred cc-------ccccCCCC-ccc-chHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCC----CCceEEEEE
Confidence 00 00000000 000 011234566666665543222455689999999999999998532 135788886
Q ss_pred ec-CCCCCccc----------------cccCCCCCCEEEEEcCCCCCCcccc-----------------hHHHHHHHHHh
Q 007311 529 CS-GFALHSAE----------------FEHRSINCPSLHIFGGDLGNDRQVA-----------------NQASKELAKAF 574 (608)
Q Consensus 529 is-G~~~~~~~----------------~~~~~i~~PvL~i~G~~~~~D~~Vp-----------------~~~~~~l~~~~ 574 (608)
++ ++...... .....+.+|++++||+ +|.++. .+.++++.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~---~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (304)
T 3d0k_A 172 ANPGWYTLPTFEHRFPEGLDGVGLTEDHLARLLAYPMTILAGD---QDIATDDPNLPSEPAALRQGPHRYARARHYYEAG 248 (304)
T ss_dssp ESCSSCCCSSTTSBTTTSSBTTTCCHHHHHHHHHSCCEEEEET---TCCCC--CCSCCSHHHHTTCSSHHHHHHHHHHHH
T ss_pred ecCcccccCCccccCccccCCCCCCHHHHHhhhcCCEEEEEeC---CCCCccccccccChhhhccCccHHHHHHHHHHHH
Confidence 65 55332110 0112356899999999 787641 23444444433
Q ss_pred c------cC--CcEEEEeCC-CCcCCCChhhHHHHHHHHHHh
Q 007311 575 E------EG--CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 575 ~------~~--~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~ 607 (608)
. .. ..+++++++ ||.+. .....+.+||..+
T Consensus 249 ~~~a~~~g~~~~~~~~~~pg~gH~~~---~~~~~~~~~~~~~ 287 (304)
T 3d0k_A 249 QRAAAQRGLPFGWQLQVVPGIGHDGQ---AMSQVCASLWFDG 287 (304)
T ss_dssp HHHHHHHTCCCCCEEEEETTCCSCHH---HHHHHHHHHHHTS
T ss_pred HHHHHhcCCCcceEEEEeCCCCCchH---HHHHHHHHHHhhh
Confidence 2 11 156666665 99973 4667788877654
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-10 Score=121.01 Aligned_cols=190 Identities=14% Similarity=0.112 Sum_probs=103.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+.|.||++||+|++...|......|++ .++.++.+|.+..-... . ..+.+. .....+...|+....
T Consensus 96 ~~~P~Vv~~HG~~~~~~~~~~~a~~La~---~Gy~V~~~d~~g~g~s~---~---~~~~~~----~~~~~~~~~~~~~~~ 162 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFRTLYSAIGIDLAS---HGFIVAAVEHRDRSASA---T---YYFKDQ----SAAEIGDKSWLYLRT 162 (383)
T ss_dssp SCEEEEEEECCTTCCTTTTHHHHHHHHH---TTCEEEEECCCSSCSSE---E---EECSSH----HHHHHTCCEEEECCC
T ss_pred CCCCEEEEcCCCCCCchHHHHHHHHHHh---CceEEEEeccCCCCccc---e---eecCCc----cccccCCceeeeccc
Confidence 3568899999999999998844444443 37999999988321100 0 000000 000001235554211
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHh---------------H-h----CCceEEEecChhHHHHHH
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS---------------Q-E----GPFDGILGFSQGAAMAAS 509 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~---------------~-~----~~~~~IlGFSQGa~vAl~ 509 (608)
... ..++. ....+.....+++..++++|.+... . . ....+|+|||+||++|+.
T Consensus 163 ~~g--~~~~~-----~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~ 235 (383)
T 3d59_A 163 LKQ--EEETH-----IRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQ 235 (383)
T ss_dssp CCH--HHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHH
T ss_pred cCc--ccchh-----hhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHH
Confidence 100 00000 0000001112344455555544211 0 1 124579999999999999
Q ss_pred HHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc-CCcEEEEeC-CC
Q 007311 510 VCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSVIIEHD-CG 587 (608)
Q Consensus 510 la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~-~~~~vv~~~-gG 587 (608)
++.. ..+++++|+++++..+........+++|+|++||+ +|..++ ..+.+..+... ...+++++. .+
T Consensus 236 ~a~~------~~~v~a~v~~~~~~~p~~~~~~~~i~~P~Lii~g~---~D~~~~--~~~~~~~l~~~~~~~~~~~~~g~~ 304 (383)
T 3d59_A 236 TLSE------DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSE---YFQYPA--NIIKMKKCYSPDKERKMITIRGSV 304 (383)
T ss_dssp HHHH------CTTCCEEEEESCCCTTCCGGGGGSCCSCEEEEEET---TTCCHH--HHHHHHTTCCTTSCEEEEEETTCC
T ss_pred HHhh------CCCccEEEEeCCccCCCchhhhccCCCCEEEEecc---cccchh--hHHHHHHHHhcCCceEEEEeCCCc
Confidence 8763 34699999999987544333456789999999999 787543 33344333332 235555555 58
Q ss_pred CcC
Q 007311 588 HII 590 (608)
Q Consensus 588 H~i 590 (608)
|.+
T Consensus 305 H~~ 307 (383)
T 3d59_A 305 HQN 307 (383)
T ss_dssp GGG
T ss_pred CCC
Confidence 986
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3e-10 Score=117.82 Aligned_cols=109 Identities=17% Similarity=0.012 Sum_probs=69.6
Q ss_pred ceEEEecChhHHHHHHHHHHHhh--h-hCCCCccEEEEecCCCCCccc-------------------------------c
Q 007311 494 FDGILGFSQGAAMAASVCAQWER--L-KGEIDFRFAILCSGFALHSAE-------------------------------F 539 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~--~-~~~~~l~~vIlisG~~~~~~~-------------------------------~ 539 (608)
...|+|+|+||.+|+.+|.+... . ..+..++++|+++++...... .
T Consensus 162 ~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (338)
T 2o7r_A 162 NCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADR 241 (338)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCT
T ss_pred eEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCHHHHHHHHHHhCCCCCCC
Confidence 45799999999999999987642 0 012379999999886532100 0
Q ss_pred ------c------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC-----
Q 007311 540 ------E------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR----- 593 (608)
Q Consensus 540 ------~------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~----- 593 (608)
. ...+.+|+|+++|+ +|.+++ .++++++.+... .+++++++ +||.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~---~D~~~~--~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~ 316 (338)
T 2o7r_A 242 DHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCH---GDPMID--RQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKA 316 (338)
T ss_dssp TSTTTCCC----CCTHHHHHHHHTCEEEEEEET---TSTTHH--HHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHH
T ss_pred CCcccCCCCCCcccccHhhhcCCCCCEEEEECC---CCcchH--HHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHH
Confidence 0 01145599999999 899887 344455554421 25666665 48976432
Q ss_pred hhhHHHHHHHHHHh
Q 007311 594 SPYIDEIKSFLQRF 607 (608)
Q Consensus 594 ~~~~~~i~~Fl~~~ 607 (608)
...++.+.+||.+.
T Consensus 317 ~~~~~~i~~Fl~~~ 330 (338)
T 2o7r_A 317 KQFFVILKKFVVDS 330 (338)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhh
Confidence 24677888888653
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-09 Score=109.21 Aligned_cols=112 Identities=16% Similarity=0.114 Sum_probs=76.1
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-----------------c-------------cccC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-----------------E-------------FEHR 542 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-----------------~-------------~~~~ 542 (608)
....|+||||||.+|+.++.++........++.+|++++...... . ....
T Consensus 97 ~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~~~~~p 176 (249)
T 3fle_A 97 QQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSRMNAAYRQLLSLYKIYC 176 (249)
T ss_dssp CEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSSCCHHHHHTGGGHHHHT
T ss_pred CceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcccCHHHHHHHHHHhhCC
Confidence 445799999999999999987642111246899999986542210 0 0112
Q ss_pred CCCCCEEEEEcCCCC---CCcccchHHHHHHHHHhccCC---cEEEEeC--CCCc-CCCChhhHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLG---NDRQVANQASKELAKAFEEGC---SVIIEHD--CGHI-IPTRSPYIDEIKSFL 604 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~---~D~~Vp~~~~~~l~~~~~~~~---~~vv~~~--gGH~-ip~~~~~~~~i~~Fl 604 (608)
...+|+|.|+|+... .|..||...++.++.++.... .++++.+ +.|. .+..+...+.|.+||
T Consensus 177 ~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~~V~~~I~~FL 247 (249)
T 3fle_A 177 GKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENKDVANEIIQFL 247 (249)
T ss_dssp TTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCHHHHHHHHHHH
T ss_pred ccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCHHHHHHHHHHh
Confidence 367899999997422 599999999999998888642 2333333 6787 444455677777776
|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.6e-12 Score=138.18 Aligned_cols=80 Identities=20% Similarity=0.266 Sum_probs=0.0
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||||++.||+.|||+| +++.+. .++...+. +.+++++||+||.+|.||..|+..|+++ ||+||
T Consensus 386 ~~~~liDvR~~~e~~~ghIpg----A~~ip~---~~l~~~~~---~l~~~~~iv~~C~~G~rs~~a~~~L~~~--G~~~v 453 (466)
T 3r2u_A 386 NESHILDVRNDNEWNNGHLSQ----AVHVPH---GKLLETDL---PFNKNDVIYVHCQSGIRSSIAIGILEHK--GYHNI 453 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEeCCHHHHhcCcCCC----CEECCH---HHHHHHHh---hCCCCCeEEEECCCChHHHHHHHHHHHc--CCCCE
Confidence 468999999999999999999 666553 33443333 2468899999999999999999999987 99999
Q ss_pred EEcCccHHHHHH
Q 007311 237 FQLYGGIQRYLE 248 (608)
Q Consensus 237 ~~L~GGi~~w~~ 248 (608)
+.|.||+.+|.+
T Consensus 454 ~~l~GG~~~W~~ 465 (466)
T 3r2u_A 454 INVNEGYKDIQL 465 (466)
T ss_dssp ------------
T ss_pred EEecChHHHHhh
Confidence 999999999975
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.8e-10 Score=114.78 Aligned_cols=179 Identities=13% Similarity=0.025 Sum_probs=113.4
Q ss_pred CCccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...+.||++||.| ++...|...+..|+... ++.++.+|.+.. + ...|
T Consensus 83 ~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~--g~~vv~~dyr~~-p-------------------------~~~~-- 132 (317)
T 3qh4_A 83 TPAPVVVYCHAGGFALGNLDTDHRQCLELARRA--RCAVVSVDYRLA-P-------------------------EHPY-- 132 (317)
T ss_dssp SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHH--TSEEEEECCCCT-T-------------------------TSCT--
T ss_pred CCCcEEEEECCCcCccCChHHHHHHHHHHHHHc--CCEEEEecCCCC-C-------------------------CCCC--
Confidence 4567899999888 67677775555555332 689999985511 0 0001
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
....++...+++++.+.....+ ...+|+|+|+||.+|+.++.+..+ .+...+
T Consensus 133 ------------------------p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~-~~~~~~ 187 (317)
T 3qh4_A 133 ------------------------PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAAD-GSLPPV 187 (317)
T ss_dssp ------------------------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH-TSSCCC
T ss_pred ------------------------chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHh-cCCCCe
Confidence 0123456667777776654433 356799999999999999987653 234578
Q ss_pred cEEEEecCCCCCccc----------------------------c--------ccC--CCCCCEEEEEcCCCCCCcccchH
Q 007311 524 RFAILCSGFALHSAE----------------------------F--------EHR--SINCPSLHIFGGDLGNDRQVANQ 565 (608)
Q Consensus 524 ~~vIlisG~~~~~~~----------------------------~--------~~~--~i~~PvL~i~G~~~~~D~~Vp~~ 565 (608)
+++|+++++...... . ... ..-.|+|++||+ +|.+++
T Consensus 188 ~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~---~D~~~~-- 262 (317)
T 3qh4_A 188 IFQLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGE---IDPFRD-- 262 (317)
T ss_dssp CEEEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEE---ESTTHH--
T ss_pred eEEEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecC---cCCCch--
Confidence 999999988654210 0 000 111399999999 899886
Q ss_pred HHHHHHHHhcc--CCcEEEEeCC-CCcCC----C---ChhhHHHHHHHHHHhC
Q 007311 566 ASKELAKAFEE--GCSVIIEHDC-GHIIP----T---RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 566 ~~~~l~~~~~~--~~~~vv~~~g-GH~ip----~---~~~~~~~i~~Fl~~~L 608 (608)
.+.++++.+.. ..++++++++ +|.+. . ....++.+.+||++.|
T Consensus 263 ~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 263 EVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF 315 (317)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHh
Confidence 34444444432 1266777665 89742 2 1347788899998753
|
| >2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A | Back alignment and structure |
|---|
Probab=99.11 E-value=5.4e-11 Score=117.93 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=62.0
Q ss_pred CCCcEEEecCChhhhhccccCCCCccccCcccc--cCC------------CchHHHHhhhhhcCCCeEEEEcCCCc-cHH
Q 007311 156 DKKLVLLDARNLYETRIGKFRTPSVETLDPEIR--QFS------------DLPTWIDNNAEQLQGKHVLMYCTGGI-RCE 220 (608)
Q Consensus 156 ~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~--~~~------------~~~~~~~~~~~~~k~k~Iv~yCtgGi-R~~ 220 (608)
+++++|||||++.||+.|||+| +++.+.. .+. +|..++.. ...+++||+||.+|. |+.
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpg----Ai~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~ivvyc~~g~~~s~ 76 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPG----ARHLDLSAPKLRLREEAELKALEGGLTELFQT---LGLRSPVVLYDEGLTSRLC 76 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTT----CEECCCCSCCCCCCSHHHHHHHHHHHHHHHHH---TTCCSSEEEECSSSCHHHH
T ss_pred CCCEEEEECCChhhHhhCcCCC----CEECCccchhcccCCCCCcCCCHHHHHHHHHh---cCCCCEEEEEcCCCCccHH
Confidence 3679999999999999999999 4444433 221 12222222 234899999999999 999
Q ss_pred HHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 221 MASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 221 ~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
+++..|+ . ||+||+.|.|| |.+
T Consensus 77 ~a~~~L~-~--G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 77 RTAFFLG-L--GGLEVQLWTEG---WEP 98 (230)
T ss_dssp HHHHHHH-H--TTCCEEEECSS---CGG
T ss_pred HHHHHHH-c--CCceEEEeCCC---Ccc
Confidence 9999999 8 99999999999 876
|
| >2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A | Back alignment and structure |
|---|
Probab=99.11 E-value=6.7e-11 Score=127.97 Aligned_cols=110 Identities=12% Similarity=0.078 Sum_probs=80.5
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--ChhhhhccccCCCCccccCcccccCCC-----c--hHHHHh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--NLYETRIGKFRTPSVETLDPEIRQFSD-----L--PTWIDN 199 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--n~~E~~~Gh~~g~~~~~l~~~~~~~~~-----~--~~~~~~ 199 (608)
...++++++.++++... ...-.+++++||||| ++.||+.|||+| +++.+...+.+ + ++.+.+
T Consensus 123 ~~~i~~~~l~~~~~~~~-----~~~~~~~~~~liDvR~~~~~e~~~ghIpg----A~nip~~~~~~~~~~~~~~~~~l~~ 193 (423)
T 2wlr_A 123 EQLVYPQWLHDLQQGKE-----VTAKPAGDWKVIEAAWGAPKLYLISHIPG----ADYIDTNEVESEPLWNKVSDEQLKA 193 (423)
T ss_dssp GGEECHHHHHHHHTTCC-----CTTCCSSCEEEEEEESSSCSHHHHCBCTT----CEEEEGGGTEETTTTEECCHHHHHH
T ss_pred CcccCHHHHHHHhhccc-----cccccCCCeEEEEecCCCchhhccCcCCC----cEEcCHHHhccCCCCCCCCHHHHHH
Confidence 35789999999886420 000012578999999 999999999999 44444333311 1 122222
Q ss_pred hh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 200 NA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 200 ~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+ ...++++||+||.+|.|+..++..|+.. ||+||+.|.||+.+|.+.
T Consensus 194 ~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~--G~~~v~~l~Gg~~~W~~~ 244 (423)
T 2wlr_A 194 MLAKHGIRHDTTVILYGRDVYAAARVAQIMLYA--GVKDVRLLDGGWQTWSDA 244 (423)
T ss_dssp HHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHH--TCSCEEEETTTHHHHHHT
T ss_pred HHHHcCCCCCCeEEEECCCchHHHHHHHHHHHc--CCCCeEEECCCHHHHhhC
Confidence 22 2468999999999999999999999997 999999999999999753
|
| >1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 | Back alignment and structure |
|---|
Probab=99.10 E-value=5.8e-11 Score=126.32 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=65.2
Q ss_pred CCcEEEecCChhhhh-----------ccccCCCCccccCcccccCC--C-----c--hHHHHhhh-----hhcC---CCe
Q 007311 157 KKLVLLDARNLYETR-----------IGKFRTPSVETLDPEIRQFS--D-----L--PTWIDNNA-----EQLQ---GKH 208 (608)
Q Consensus 157 ~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~~~~~--~-----~--~~~~~~~~-----~~~k---~k~ 208 (608)
++.+|||||++.||. .|||+| +++.+...+. + + ++.+.+.+ ...+ +++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpG----AiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ 248 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEG----ARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSS 248 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTT----CEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTT
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCC----cEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCC
Confidence 478999999999999 999999 4444433321 1 1 12232222 2256 899
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.|+..++..|+.. ||+||+++.||+..|...
T Consensus 249 ivvyC~sG~rs~~a~~~L~~~--G~~~v~~~~GG~~~W~~~ 287 (373)
T 1okg_A 249 FVFSCGSGVTACINIALVHHL--GLGHPYLYCGSWSEYSGL 287 (373)
T ss_dssp SEEECSSSSTHHHHHHHHHHT--TSCCCEECSSHHHHHHHH
T ss_pred EEEECCchHHHHHHHHHHHHc--CCCCeeEeCChHHHHhcC
Confidence 999999999999999999987 999999999999999863
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.8e-09 Score=107.09 Aligned_cols=130 Identities=13% Similarity=0.100 Sum_probs=83.8
Q ss_pred cHHHHHHHHHHHHhHh----C-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------
Q 007311 476 GLDVSLAYLKTIFSQE----G-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------ 538 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~----~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------ 538 (608)
+++...++|.++++.. + ....|+||||||.+|+.++..+........++.+|++++.......
T Consensus 76 ~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~~~~~~~~~l 155 (250)
T 3lp5_A 76 NIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTAKTSMFKEL 155 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccccccCHHHHHH
Confidence 3555556666655543 3 3457999999999999998865321114579999999876543210
Q ss_pred ---cccCCCCCCEEEEEcCC-CCCCcccchHHHHHHHHHhccCCcE--EEEe---CCCCcCCCC-hhhHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGD-LGNDRQVANQASKELAKAFEEGCSV--IIEH---DCGHIIPTR-SPYIDEIKSFLQ 605 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~-~~~D~~Vp~~~~~~l~~~~~~~~~~--vv~~---~gGH~ip~~-~~~~~~i~~Fl~ 605 (608)
...-...+|++.|+|+. +..|.+||.+.++.++..++..... .+.. +++|..... +...+.|.+||.
T Consensus 156 ~~~~~~lp~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~~v~~~I~~FL~ 232 (250)
T 3lp5_A 156 YRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNKQIVSLIRQYLL 232 (250)
T ss_dssp HHTGGGSCTTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHHHHHHHHHHHTS
T ss_pred HhccccCCCCceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCHHHHHHHHHHHh
Confidence 01112379999999971 1259999999999999988753222 2223 246875443 345667777764
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.5e-10 Score=127.61 Aligned_cols=107 Identities=19% Similarity=0.169 Sum_probs=81.8
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-------------------------ccccCCCCCCE
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-------------------------EFEHRSINCPS 548 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-------------------------~~~~~~i~~Pv 548 (608)
..+|+||||||.+|+.++.+. +..++++|++++...... ......+++|+
T Consensus 603 ~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 677 (741)
T 2ecf_A 603 RIGVQGWSNGGYMTLMLLAKA-----SDSYACGVAGAPVTDWGLYDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPL 677 (741)
T ss_dssp EEEEEEETHHHHHHHHHHHHC-----TTTCSEEEEESCCCCGGGSBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCE
T ss_pred hEEEEEEChHHHHHHHHHHhC-----CCceEEEEEcCCCcchhhhccccchhhcCCcccChhhhhhcCHHHHHhhCCCCE
Confidence 457999999999999999853 457999999988643210 01245788999
Q ss_pred EEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC--hhhHHHHHHHHHHhC
Q 007311 549 LHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR--SPYIDEIKSFLQRFL 608 (608)
Q Consensus 549 L~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~--~~~~~~i~~Fl~~~L 608 (608)
|++||+ +|..+|.+.++++++.+... ..+++.++ +||.+... ....+.+.+||.+.|
T Consensus 678 lii~G~---~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 678 LLIHGM---ADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCL 739 (741)
T ss_dssp EEEEET---TCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccC---CCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHhc
Confidence 999999 89999999999999988753 24666665 49998643 346788899998754
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-09 Score=116.97 Aligned_cols=100 Identities=13% Similarity=0.005 Sum_probs=70.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccC----------CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccc
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKN----------IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKR 441 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~----------~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (608)
.+.|||+||++++...|. .+...|.. .+++|.+|.| +
T Consensus 92 ~~plll~HG~~~s~~~~~----~~~~~L~~~~~~~~~~~~~~~vi~~dl~-----------------------------G 138 (388)
T 4i19_A 92 ATPMVITHGWPGTPVEFL----DIIGPLTDPRAHGGDPADAFHLVIPSLP-----------------------------G 138 (388)
T ss_dssp CEEEEEECCTTCCGGGGH----HHHHHHHCGGGGTSCGGGCEEEEEECCT-----------------------------T
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhCcccccCCCCCCeEEEEEcCC-----------------------------C
Confidence 467999999999999999 55555554 7999999988 1
Q ss_pred eeeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCC
Q 007311 442 FAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGE 520 (608)
Q Consensus 442 ~~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~ 520 (608)
+.+-..+. + ...++.+..+.+.+++...+ ....++|+||||++|+.+|.++ +
T Consensus 139 ~G~S~~~~----------------~------~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~-----p 191 (388)
T 4i19_A 139 FGLSGPLK----------------S------AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAID-----P 191 (388)
T ss_dssp SGGGCCCS----------------S------CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHC-----G
T ss_pred CCCCCCCC----------------C------CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhC-----h
Confidence 11100000 0 01235566667777777655 4558999999999999999964 4
Q ss_pred CCccEEEEecC
Q 007311 521 IDFRFAILCSG 531 (608)
Q Consensus 521 ~~l~~vIlisG 531 (608)
..++++|++++
T Consensus 192 ~~v~~lvl~~~ 202 (388)
T 4i19_A 192 SHLAGIHVNLL 202 (388)
T ss_dssp GGEEEEEESSC
T ss_pred hhceEEEEecC
Confidence 56899999874
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.6e-09 Score=110.40 Aligned_cols=127 Identities=18% Similarity=0.130 Sum_probs=81.9
Q ss_pred ccHHHHHHHHHHHH-h---HhCC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------
Q 007311 475 DGLDVSLAYLKTIF-S---QEGP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i-~---~~~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------- 538 (608)
++...++++|.+.- . .... ..+|+|+|+||.+|+.++.+... ....++++|+++++......
T Consensus 166 ~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~--~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~ 243 (365)
T 3ebl_A 166 DDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD--EGVKVCGNILLNAMFGGTERTESERRLDGKY 243 (365)
T ss_dssp HHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHH--TTCCCCEEEEESCCCCCSSCCHHHHHHTTTS
T ss_pred HHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHh--cCCceeeEEEEccccCCCcCChhhhhcCCCc
Confidence 45556666665321 1 1123 56899999999999999987653 23579999999987642110
Q ss_pred -----------------------c-------ccCCCC----CCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEE
Q 007311 539 -----------------------F-------EHRSIN----CPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVII 582 (608)
Q Consensus 539 -----------------------~-------~~~~i~----~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv 582 (608)
. ....++ .|+|++||+ +|..++ .++++++.+... .++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~pP~Li~~G~---~D~l~~--~~~~~~~~L~~~g~~v~l~ 318 (365)
T 3ebl_A 244 FVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSG---LDLTCD--RQLAYADALREDGHHVKVV 318 (365)
T ss_dssp SCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCCCCEEEEEET---TSTTHH--HHHHHHHHHHHTTCCEEEE
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhccCCCCCEEEEEcC---cccchh--HHHHHHHHHHHCCCCEEEE
Confidence 0 011223 589999999 897664 456666666542 36777
Q ss_pred EeCC-CCcCC---CC---hhhHHHHHHHHHHhC
Q 007311 583 EHDC-GHIIP---TR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 583 ~~~g-GH~ip---~~---~~~~~~i~~Fl~~~L 608 (608)
++++ +|.+. .. .+.++.+.+||++.+
T Consensus 319 ~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~ 351 (365)
T 3ebl_A 319 QCENATVGFYLLPNTVHYHEVMEEISDFLNANL 351 (365)
T ss_dssp EETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHC
T ss_pred EECCCcEEEeccCCCHHHHHHHHHHHHHHHHhh
Confidence 7765 89754 21 246788999998754
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.04 E-value=9.1e-10 Score=111.87 Aligned_cols=105 Identities=17% Similarity=0.069 Sum_probs=76.6
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------------------------------- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------------------------------- 538 (608)
..+|+||||||.+|+.++.+. +..++++|++||.......
T Consensus 113 ~~~l~G~S~GG~~al~~a~~~-----p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p 187 (280)
T 1r88_A 113 GHAAVGAAQGGYGAMALAAFH-----PDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDP 187 (280)
T ss_dssp CEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCT
T ss_pred ceEEEEECHHHHHHHHHHHhC-----ccceeEEEEECCccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCH
Confidence 558999999999999999854 5679999999998653210
Q ss_pred -cccCC---CCCCEEEEE----cCCCCCCcc-------cchHHHHHHHHHhccCC---cEEEEe-CCCCcCCCChhhHHH
Q 007311 539 -FEHRS---INCPSLHIF----GGDLGNDRQ-------VANQASKELAKAFEEGC---SVIIEH-DCGHIIPTRSPYIDE 599 (608)
Q Consensus 539 -~~~~~---i~~PvL~i~----G~~~~~D~~-------Vp~~~~~~l~~~~~~~~---~~vv~~-~gGH~ip~~~~~~~~ 599 (608)
..... ..+|+++++ |+ +|.. ++.+.++++++.++... .++.++ +++|........+..
T Consensus 188 ~~~~~~~~~~~~pv~i~~~~~~G~---~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~~w~~~l~~ 264 (280)
T 1r88_A 188 WVHASLLAQNNTRVWVWSPTNPGA---SDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDFPASGDNGWGSWAPQLGA 264 (280)
T ss_dssp TTTHHHHHHTTCEEEEECCSSCCC---SSGGGGTTCHHHHHHHHHHHHHHHHHTTCCSEEEECCSSCCSSHHHHHHHHHH
T ss_pred HHHHHhhhccCCeEEEEeccCCCC---CCcccccchhHHHHHHHHHHHHHHHHCCCcceEEEecCCCCcChhHHHHHHHH
Confidence 00112 258999999 98 7873 58899999999887544 555664 679987655556666
Q ss_pred HHHHHHH
Q 007311 600 IKSFLQR 606 (608)
Q Consensus 600 i~~Fl~~ 606 (608)
...||.+
T Consensus 265 ~l~~~~~ 271 (280)
T 1r88_A 265 MSGDIVG 271 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6677654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=123.23 Aligned_cols=107 Identities=20% Similarity=0.180 Sum_probs=79.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc----------------cc-----------cccCCCCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS----------------AE-----------FEHRSINC 546 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~----------------~~-----------~~~~~i~~ 546 (608)
..+|+||||||.+|+.++.+ .+..++++|++++..... .. .....+++
T Consensus 579 ~i~l~G~S~GG~~a~~~a~~-----~p~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (719)
T 1z68_A 579 RIAIWGWSYGGYVSSLALAS-----GTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRN 653 (719)
T ss_dssp EEEEEEETHHHHHHHHHHTT-----SSSCCSEEEEESCCCCTTTSBHHHHHHHHCCSSTTTTHHHHHHTCSGGGGGGGTT
T ss_pred eEEEEEECHHHHHHHHHHHh-----CCCceEEEEEcCCccChHHhccccchhhcCCcccccchhhhhhCCHhHHHhcCCC
Confidence 45799999999999999973 355799999999864321 00 12345677
Q ss_pred -CEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC--hhhHHHHHHHHHHhC
Q 007311 547 -PSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR--SPYIDEIKSFLQRFL 608 (608)
Q Consensus 547 -PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~--~~~~~~i~~Fl~~~L 608 (608)
|+|++||+ +|..+|.+.++++++.+... ..++++++ +||.+... ....+.+.+||.+.|
T Consensus 654 ~P~li~~G~---~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 654 VDYLLIHGT---ADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp SEEEEEEET---TCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeC---CCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHhh
Confidence 89999999 89999999999999988753 24566665 59998332 236778889988754
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=112.48 Aligned_cols=172 Identities=13% Similarity=0.046 Sum_probs=104.3
Q ss_pred CccEEEEecCCCCChHH-HHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQNASS-FKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~-f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.++.||++||++.+... |.. .+.+.|. .+++++.+|.|- +..-+
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~---~l~~~L~~~G~~v~~~d~~g-----------------------------~g~~~-- 75 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDS---NWIPLSTQLGYTPCWISPPP-----------------------------FMLND-- 75 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTT---THHHHHHTTTCEEEEECCTT-----------------------------TTCSC--
T ss_pred CCCeEEEECCCCCCcchhhHH---HHHHHHHhCCCEEEEECCCC-----------------------------CCCCc--
Confidence 44579999999999986 761 2344443 378999998771 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.....++..+.+..+++..+ ....|+||||||.+++.++..+. .....++++|
T Consensus 76 ------------------------~~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~--~~~~~v~~lV 129 (317)
T 1tca_A 76 ------------------------TQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFP--SIRSKVDRLM 129 (317)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCG--GGTTTEEEEE
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcC--ccchhhhEEE
Confidence 00112223333444444444 55689999999999998877542 1136799999
Q ss_pred EecCCCCCcc----------------c-----------c-c-cCCCCCCEEEEEcCCCCCCcccchHH--HHHHHHHhcc
Q 007311 528 LCSGFALHSA----------------E-----------F-E-HRSINCPSLHIFGGDLGNDRQVANQA--SKELAKAFEE 576 (608)
Q Consensus 528 lisG~~~~~~----------------~-----------~-~-~~~i~~PvL~i~G~~~~~D~~Vp~~~--~~~l~~~~~~ 576 (608)
++++...... + . . .....+|+++|+|. .|.+|++.. ++.....+..
T Consensus 130 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~f~~~L~~~~~~~~~vp~~~i~g~---~D~iV~p~~~~g~~~~~~l~~ 206 (317)
T 1tca_A 130 AFAPDYKGTVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIVPTTNLYSA---TDEIVQPQVSNSPLDSSYLFN 206 (317)
T ss_dssp EESCCTTCBGGGHHHHHTTCBCHHHHHTBTTCHHHHHHHHTTTTBCSSCEEEEECT---TCSSSCCCCSSSTTSTTCCBT
T ss_pred EECCCCCCCcchhhhhhhhhcCchHHhhCcCcHHHHHHHhcCCCCCCCCEEEEEeC---CCCeECCccccccchhhhccC
Confidence 9997532100 0 0 0 11257999999999 899998766 3332333333
Q ss_pred CCcEEEE-------eCCCCc-CCCChhhHHHHHHHHHH
Q 007311 577 GCSVIIE-------HDCGHI-IPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 577 ~~~~vv~-------~~gGH~-ip~~~~~~~~i~~Fl~~ 606 (608)
. ..+.. ...||. +..++.....|.+||..
T Consensus 207 a-~~~~~~~~~~~~~~~gH~~~l~~p~~~~~v~~~L~~ 243 (317)
T 1tca_A 207 G-KNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSALRS 243 (317)
T ss_dssp S-EEEEHHHHHCTTCCCCTTHHHHBHHHHHHHHHHHHC
T ss_pred C-ccEEeeeccCCCCccCcccccCCHHHHHHHHHHhcC
Confidence 1 22222 245897 44455677888999874
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-09 Score=124.05 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=79.7
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc----------------cc-----------cccCCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS----------------AE-----------FEHRSIN 545 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~----------------~~-----------~~~~~i~ 545 (608)
...+|+||||||.+|+.++.+ .+..++++|++++..... .. .....++
T Consensus 584 ~ri~i~G~S~GG~~a~~~a~~-----~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~ 658 (740)
T 4a5s_A 584 KRIAIWGWSYGGYVTSMVLGS-----GSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFK 658 (740)
T ss_dssp EEEEEEEETHHHHHHHHHHTT-----TCSCCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGG
T ss_pred ccEEEEEECHHHHHHHHHHHh-----CCCceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHHhcCC
Confidence 345799999999999999984 356789999999874321 00 1234566
Q ss_pred C-CEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC---hhhHHHHHHHHHHhC
Q 007311 546 C-PSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 546 ~-PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
. |+|++||+ +|..||.+.++++++.+... ..+++.++ +||.+... ....+.+.+||.+.|
T Consensus 659 ~~P~Lii~G~---~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 725 (740)
T 4a5s_A 659 QVEYLLIHGT---ADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 725 (740)
T ss_dssp GSEEEEEEET---TCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEcC---CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHc
Confidence 5 99999999 89999999999999988753 24556664 59998321 236788889998764
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.97 E-value=6.3e-10 Score=126.61 Aligned_cols=111 Identities=13% Similarity=0.096 Sum_probs=78.8
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-----------------c--------cccCCCC-CC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-----------------E--------FEHRSIN-CP 547 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-----------------~--------~~~~~i~-~P 547 (608)
..+|+||||||.+|+.++.+... ..+..++++|++++...... . .....++ +|
T Consensus 579 ~i~l~G~S~GG~~a~~~a~~~~~-~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 657 (723)
T 1xfd_A 579 RVAVFGKDYGGYLSTYILPAKGE-NQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQ 657 (723)
T ss_dssp EEEEEEETHHHHHHHHCCCCSSS-TTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCE
T ss_pred hEEEEEECHHHHHHHHHHHhccc-cCCCeEEEEEEccCCcchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCC
Confidence 45799999999999998873200 00467999999988542110 0 1234677 79
Q ss_pred EEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC---hhhHHHHHHHHHHhC
Q 007311 548 SLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 548 vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
+|++||+ +|..+|.+.++++++.+... ..++++++ +||.+... ....+.+.+||.+.|
T Consensus 658 ~lii~G~---~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 658 FLIIHPT---ADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp EEEEEET---TCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred EEEEEeC---CCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHh
Confidence 9999999 89999999999999888642 35666665 59987321 236778888987654
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-09 Score=111.19 Aligned_cols=174 Identities=13% Similarity=0.108 Sum_probs=112.7
Q ss_pred EEEEecC--CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 374 RILCLHG--FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 374 ~iLlLHG--~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++|+|| ++++...|. .|.+.|...+.++.+|.|-.-. + ...+-.
T Consensus 91 ~l~~~hg~g~~~~~~~~~----~l~~~L~~~~~v~~~d~~G~g~---------------------~---~~~~~~----- 137 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFL----RLSTSFQEERDFLAVPLPGYGT---------------------G---TGTGTA----- 137 (319)
T ss_dssp EEEEECCCCTTCSTTTTH----HHHHTTTTTCCEEEECCTTCCB---------------------C------CBC-----
T ss_pred cEEEeCCCCCCCcHHHHH----HHHHhcCCCCceEEecCCCCCC---------------------C---cccccC-----
Confidence 7999998 778888898 8888898889999999881000 0 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+++..+.+.+.+... .....|+|||+||.+|+.+|.+.+.. ....++++|++
T Consensus 138 --------------------~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~-~g~~v~~lvl~ 196 (319)
T 2hfk_A 138 --------------------LLPADLDTALDAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERA-HGAPPAGIVLV 196 (319)
T ss_dssp --------------------CEESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHH-HSCCCSEEEEE
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHHh-hCCCceEEEEe
Confidence 01234555566665665543 22348999999999999999876521 03468999999
Q ss_pred cCCCCCccc--------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH-HHHH
Q 007311 530 SGFALHSAE--------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA-SKEL 570 (608)
Q Consensus 530 sG~~~~~~~--------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l 570 (608)
+++.+.... .....+++|+++++|. |+.++... ...+
T Consensus 197 d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~----D~~~~~~~~~~~~ 272 (319)
T 2hfk_A 197 DPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRAS----EPLGDWQEERGDW 272 (319)
T ss_dssp SCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEES----SCSSCCCGGGCCC
T ss_pred CCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEcC----CCCCCccccccch
Confidence 987653210 1235788999999994 87777654 4444
Q ss_pred HHHhccCCcEEEEeCCCCcC-C-CC-hhhHHHHHHHHHH
Q 007311 571 AKAFEEGCSVIIEHDCGHII-P-TR-SPYIDEIKSFLQR 606 (608)
Q Consensus 571 ~~~~~~~~~~vv~~~gGH~i-p-~~-~~~~~~i~~Fl~~ 606 (608)
.+.... ...++..++||.. . .. ....+.|.+||.+
T Consensus 273 ~~~~~~-~~~~~~v~g~H~~~~~e~~~~~~~~i~~~L~~ 310 (319)
T 2hfk_A 273 RAHWDL-PHTVADVPGDHFTMMRDHAPAVAEAVLSWLDA 310 (319)
T ss_dssp SCCCSS-CSEEEEESSCTTHHHHTCHHHHHHHHHHHHHH
T ss_pred hhcCCC-CCEEEEeCCCcHHHHHHhHHHHHHHHHHHHHh
Confidence 444333 2667777789983 2 22 2356777777764
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.93 E-value=5.7e-09 Score=119.25 Aligned_cols=187 Identities=14% Similarity=0.096 Sum_probs=114.5
Q ss_pred CCccEEEEecCCCCChH--HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNAS--SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~--~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.||++||...... .|......|.+ .++.++.+|.+- +. .-+..|...
T Consensus 444 ~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~rG--------~g----------------~~g~~~~~~ 496 (695)
T 2bkl_A 444 GNAPTLLYGYGGFNVNMEANFRSSILPWLD---AGGVYAVANLRG--------GG----------------EYGKAWHDA 496 (695)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCGGGHHHHH---TTCEEEEECCTT--------SS----------------TTCHHHHHT
T ss_pred CCccEEEEECCCCccccCCCcCHHHHHHHh---CCCEEEEEecCC--------CC----------------CcCHHHHHh
Confidence 45688999999554433 45533434543 479999998761 10 012345431
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.. ........+++.+++++|.+.-.......+|+|+|+||.+++.++.+. +..++++|
T Consensus 497 ~~-----------------~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~-----p~~~~~~v 554 (695)
T 2bkl_A 497 GR-----------------LDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQR-----PELYGAVV 554 (695)
T ss_dssp TS-----------------GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----GGGCSEEE
T ss_pred hH-----------------hhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhC-----CcceEEEE
Confidence 00 000011223444444444322110123568999999999999999854 34689999
Q ss_pred EecCCCCCcc--------------------c-----------cccCCCC--CCEEEEEcCCCCCCcccchHHHHHHHHHh
Q 007311 528 LCSGFALHSA--------------------E-----------FEHRSIN--CPSLHIFGGDLGNDRQVANQASKELAKAF 574 (608)
Q Consensus 528 lisG~~~~~~--------------------~-----------~~~~~i~--~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~ 574 (608)
+.+++..... + .....+. .|+|++||. +|..||+..++++++.+
T Consensus 555 ~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~---~D~~v~~~~~~~~~~~l 631 (695)
T 2bkl_A 555 CAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAAD---HDDRVDPMHARKFVAAV 631 (695)
T ss_dssp EESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEET---TCSSSCTHHHHHHHHHH
T ss_pred EcCCccchhhccccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeC---CCCCCChHHHHHHHHHH
Confidence 9888753210 0 0112233 699999999 89999999999999988
Q ss_pred cc-----CCcEEEEe-CCCCcCCCC----hhhHHHHHHHHHHhC
Q 007311 575 EE-----GCSVIIEH-DCGHIIPTR----SPYIDEIKSFLQRFL 608 (608)
Q Consensus 575 ~~-----~~~~vv~~-~gGH~ip~~----~~~~~~i~~Fl~~~L 608 (608)
.. ....++++ ++||.+... .++...+.+||.+.|
T Consensus 632 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 675 (695)
T 2bkl_A 632 QNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVL 675 (695)
T ss_dssp HTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHT
T ss_pred HhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 65 22566555 569997432 236678888998754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=8.5e-09 Score=118.07 Aligned_cols=187 Identities=14% Similarity=0.063 Sum_probs=114.2
Q ss_pred CCccEEEEecCCCCChH--HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNAS--SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~--~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.||++||.+.+.. .|......|... .++.++.+|.+ .+. .-+..|...
T Consensus 464 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~--~G~~v~~~d~r--------G~g----------------~~g~~~~~~ 517 (710)
T 2xdw_A 464 GSHPAFLYGYGGFNISITPNYSVSRLIFVRH--MGGVLAVANIR--------GGG----------------EYGETWHKG 517 (710)
T ss_dssp SCSCEEEECCCCTTCCCCCCCCHHHHHHHHH--HCCEEEEECCT--------TSS----------------TTHHHHHHT
T ss_pred CCccEEEEEcCCCCCcCCCcccHHHHHHHHh--CCcEEEEEccC--------CCC----------------CCChHHHHh
Confidence 35688999999776553 243333344430 37999999866 110 012345441
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.. ........+++.+++++|.+.-.......+|+|+|+||.+++.++.+. +..++++|
T Consensus 518 ~~-----------------~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~-----p~~~~~~v 575 (710)
T 2xdw_A 518 GI-----------------LANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQR-----PDLFGCVI 575 (710)
T ss_dssp TS-----------------GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----GGGCSEEE
T ss_pred hh-----------------hhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhC-----ccceeEEE
Confidence 00 000011123444444444322000123568999999999999999854 34689999
Q ss_pred EecCCCCCcc--------------------c-----------cccC-----CCCC-CEEEEEcCCCCCCcccchHHHHHH
Q 007311 528 LCSGFALHSA--------------------E-----------FEHR-----SINC-PSLHIFGGDLGNDRQVANQASKEL 570 (608)
Q Consensus 528 lisG~~~~~~--------------------~-----------~~~~-----~i~~-PvL~i~G~~~~~D~~Vp~~~~~~l 570 (608)
+.+++..... + .... .+++ |+|++||+ +|..||+..+.++
T Consensus 576 ~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~---~D~~v~~~~~~~~ 652 (710)
T 2xdw_A 576 AQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTAD---HDDRVVPLHSLKF 652 (710)
T ss_dssp EESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEET---TCCSSCTHHHHHH
T ss_pred EcCCcccHhhccccCCChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeC---CCCccChhHHHHH
Confidence 9888653210 0 1122 5676 99999999 8999999999998
Q ss_pred HHHhccC---------CcEEEEe-CCCCcCCCCh----hhHHHHHHHHHHh
Q 007311 571 AKAFEEG---------CSVIIEH-DCGHIIPTRS----PYIDEIKSFLQRF 607 (608)
Q Consensus 571 ~~~~~~~---------~~~vv~~-~gGH~ip~~~----~~~~~i~~Fl~~~ 607 (608)
++.+... .++++++ ++||.+.... .+...+.+||.+.
T Consensus 653 ~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 703 (710)
T 2xdw_A 653 IATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARC 703 (710)
T ss_dssp HHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8877642 2455555 5699986642 3567888888764
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.6e-09 Score=119.71 Aligned_cols=186 Identities=18% Similarity=0.089 Sum_probs=108.7
Q ss_pred CCccEEEEecCCCCChH--HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNAS--SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~--~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.||++||.+.+.. .|......|. ..++.++.+|.+ .+. .-+..|...
T Consensus 486 ~~~p~vl~~hGg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~r--------G~g----------------~~g~~~~~~ 538 (741)
T 1yr2_A 486 GPLPTLLYGYGGFNVALTPWFSAGFMTWI---DSGGAFALANLR--------GGG----------------EYGDAWHDA 538 (741)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCHHHHHHH---TTTCEEEEECCT--------TSS----------------TTHHHHHHT
T ss_pred CCCcEEEEECCCCCccCCCCcCHHHHHHH---HCCcEEEEEecC--------CCC----------------CCCHHHHHh
Confidence 34688999999876654 3443333333 357999999866 110 012345441
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.. . .......+++.+++++|.+.-.......+|+|+|+||.+++.++.+. +..++++|
T Consensus 539 ~~---------------~--~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~-----p~~~~~~v 596 (741)
T 1yr2_A 539 GR---------------R--DKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQR-----PDLFAAAS 596 (741)
T ss_dssp TS---------------G--GGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHC-----GGGCSEEE
T ss_pred hh---------------h--hcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhC-----chhheEEE
Confidence 00 0 00011233444444444332101234568999999999999999854 34689999
Q ss_pred EecCCCCCcc--------------------c-----------cccCC-CCC-CEEEEEcCCCCCCcccchHHHHHHHHHh
Q 007311 528 LCSGFALHSA--------------------E-----------FEHRS-INC-PSLHIFGGDLGNDRQVANQASKELAKAF 574 (608)
Q Consensus 528 lisG~~~~~~--------------------~-----------~~~~~-i~~-PvL~i~G~~~~~D~~Vp~~~~~~l~~~~ 574 (608)
+.+++..... + ..... +++ |+|++||. +|..||+..+.++++.+
T Consensus 597 ~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~---~D~~v~~~~~~~~~~~l 673 (741)
T 1yr2_A 597 PAVGVMDMLRFDQFTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTAD---TDDRVVPGHSFKYTAAL 673 (741)
T ss_dssp EESCCCCTTSGGGSTTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECS---CCSSSCTHHHHHHHHHH
T ss_pred ecCCccccccccCCCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeC---CCCCCChhHHHHHHHHH
Confidence 9888653210 0 01122 564 99999999 89999999999999888
Q ss_pred cc---C--CcEEEEe-CCCCcCCCCh----hhHHHHHHHHHHh
Q 007311 575 EE---G--CSVIIEH-DCGHIIPTRS----PYIDEIKSFLQRF 607 (608)
Q Consensus 575 ~~---~--~~~vv~~-~gGH~ip~~~----~~~~~i~~Fl~~~ 607 (608)
.. . .+.++++ ++||.+.... .+...+.+||.+.
T Consensus 674 ~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 674 QTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHF 716 (741)
T ss_dssp HHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 65 2 2555555 5699975532 3567888888764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.4e-08 Score=116.36 Aligned_cols=187 Identities=19% Similarity=0.141 Sum_probs=111.1
Q ss_pred CCccEEEEecCCCCCh--HHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNA--SSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na--~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.||++||..... ..|......|.+ .++.++.+|.+ .+. ..+..|...
T Consensus 452 ~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~R--------G~g----------------~~g~~~~~~ 504 (693)
T 3iuj_A 452 GSNPTILYGYGGFDVSLTPSFSVSVANWLD---LGGVYAVANLR--------GGG----------------EYGQAWHLA 504 (693)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCHHHHHHHH---TTCEEEEECCT--------TSS----------------TTCHHHHHT
T ss_pred CCccEEEEECCCCCcCCCCccCHHHHHHHH---CCCEEEEEeCC--------CCC----------------ccCHHHHHh
Confidence 4568999999965533 334433334443 47899999866 110 113355441
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.. ........+++.+++++|.+.-.......+|+|+|+||.+++.++.+. +..++++|
T Consensus 505 ~~-----------------~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~-----p~~~~a~v 562 (693)
T 3iuj_A 505 GT-----------------QQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQR-----PDLMRVAL 562 (693)
T ss_dssp TS-----------------GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----TTSCSEEE
T ss_pred hh-----------------hhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhC-----ccceeEEE
Confidence 10 000011234455555554332101124568999999999999998853 56789999
Q ss_pred EecCCCCCcc--------------------c------------cccCC-CCCC-EEEEEcCCCCCCcccchHHHHHHHHH
Q 007311 528 LCSGFALHSA--------------------E------------FEHRS-INCP-SLHIFGGDLGNDRQVANQASKELAKA 573 (608)
Q Consensus 528 lisG~~~~~~--------------------~------------~~~~~-i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~ 573 (608)
+.+|+..... . ..... +++| +|++||. +|..||+..+.++++.
T Consensus 563 ~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~---~D~~v~~~~~~~~~~~ 639 (693)
T 3iuj_A 563 PAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTAD---HDDRVVPAHSFKFAAT 639 (693)
T ss_dssp EESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEES---SCSSSCTHHHHHHHHH
T ss_pred ecCCcchhhhhccCCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecC---CCCCCChhHHHHHHHH
Confidence 9888763211 0 01223 7888 9999999 8999999999999988
Q ss_pred hccC-----CcEEEEe-CCCCcCCCC----hhhHHHHHHHHHHhC
Q 007311 574 FEEG-----CSVIIEH-DCGHIIPTR----SPYIDEIKSFLQRFL 608 (608)
Q Consensus 574 ~~~~-----~~~vv~~-~gGH~ip~~----~~~~~~i~~Fl~~~L 608 (608)
+... .++++++ ++||.+... .++...+.+||.+.|
T Consensus 640 l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 684 (693)
T 3iuj_A 640 LQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEM 684 (693)
T ss_dssp HHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHc
Confidence 8642 2456555 569987552 135667888988754
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.82 E-value=4e-08 Score=101.28 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=69.2
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++++|+||+|+++..|. .|.+.|. ++++.++.|.. +
T Consensus 45 ~~~~l~~~hg~~g~~~~~~----~~~~~l~--~~v~~~~~~~~-~----------------------------------- 82 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFH----SLASRLS--IPTYGLQCTRA-A----------------------------------- 82 (316)
T ss_dssp SSCCEEEECCTTCCSGGGH----HHHHHCS--SCEEEECCCTT-S-----------------------------------
T ss_pred CCCeEEEECCCCCCHHHHH----HHHHhcC--CCEEEEECCCC-C-----------------------------------
Confidence 3467999999999999999 8888886 78888877610 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCC---ccE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEID---FRF 525 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~---l~~ 525 (608)
....+++..+.+.+.+.... ....++|||+||.+|+.+|.+.+.. ... +++
T Consensus 83 ----------------------~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~--g~~~p~v~~ 138 (316)
T 2px6_A 83 ----------------------PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQ--QSPAPTHNS 138 (316)
T ss_dssp ----------------------CTTCHHHHHHHHHHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHHH--C---CCCCE
T ss_pred ----------------------CcCCHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHHc--CCcccccce
Confidence 01235566666667776542 2248999999999999999876531 223 788
Q ss_pred EEEecCCC
Q 007311 526 AILCSGFA 533 (608)
Q Consensus 526 vIlisG~~ 533 (608)
+|++++.+
T Consensus 139 l~li~~~~ 146 (316)
T 2px6_A 139 LFLFDGSP 146 (316)
T ss_dssp EEEESCSS
T ss_pred EEEEcCCc
Confidence 99888764
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.8e-08 Score=107.30 Aligned_cols=42 Identities=17% Similarity=0.306 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC---cEEEEeCCCCc
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC---SVIIEHDCGHI 589 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~---~~vv~~~gGH~ 589 (608)
++|+|++||+ +|.+||.+.++++.+.+.... +.++..+.||.
T Consensus 325 ~~P~li~~g~---~D~~vp~~~~~~~~~~~~~~g~~~v~l~~~~~g~~ 369 (397)
T 3h2g_A 325 QTPTLLCGSS---NDATVPLKNAQTAIASFQQRGSNQVALVDTGTGNA 369 (397)
T ss_dssp CSCEEEEECT---TBSSSCTHHHHHHHHHHHHTTCCCEEEEECSCSCG
T ss_pred CCCEEEEEEC---CCCccCHHHHHHHHHHHHhcCCCceEEEEcCCCCC
Confidence 7899999999 899999999999999886432 34444444553
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.6e-08 Score=114.27 Aligned_cols=126 Identities=14% Similarity=0.029 Sum_probs=85.0
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------- 538 (608)
+++..++++|.+.-.......+|+|+|+||.+++.++.+. +..++++|+.+|.......
T Consensus 540 ~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~-----pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p 614 (711)
T 4hvt_A 540 NDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQR-----PELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDP 614 (711)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----GGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCT
T ss_pred HHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhC-----cCceEEEEEeCCccchhhhhccccchHHHHHhCCC
Confidence 4455555554432111224568999999999999998854 3468999998886532110
Q ss_pred ---------------cccCCCCC--CEEEEEcCCCCCCcccchHHHHHHHHHh-ccC--CcEEEEe-CCCCcCCCChh--
Q 007311 539 ---------------FEHRSINC--PSLHIFGGDLGNDRQVANQASKELAKAF-EEG--CSVIIEH-DCGHIIPTRSP-- 595 (608)
Q Consensus 539 ---------------~~~~~i~~--PvL~i~G~~~~~D~~Vp~~~~~~l~~~~-~~~--~~~vv~~-~gGH~ip~~~~-- 595 (608)
.....++. |+|++||. +|..||+..+.++++.+ ... .++++++ +.||.+.....
T Consensus 615 ~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~---~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~ 691 (711)
T 4hvt_A 615 EIPNDLLHIKKYAPLENLSLTQKYPTVLITDSV---LDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKES 691 (711)
T ss_dssp TSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEET---TCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHH
T ss_pred cCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecC---CCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchH
Confidence 11234555 99999999 89999999999999988 542 2555555 56999755322
Q ss_pred --hHHHHHHHHHHhC
Q 007311 596 --YIDEIKSFLQRFL 608 (608)
Q Consensus 596 --~~~~i~~Fl~~~L 608 (608)
+...+.+||.+.|
T Consensus 692 ~~~~~~i~~FL~~~L 706 (711)
T 4hvt_A 692 ANYFINLYTFFANAL 706 (711)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 4456778887653
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=3.6e-08 Score=105.98 Aligned_cols=93 Identities=15% Similarity=0.109 Sum_probs=63.8
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc---CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK---NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~---~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|||+||++++...|...+..|.+... ..+++|.+|.| +. .+=+.+
T Consensus 109 ~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~Dlp--------G~---------------------G~S~~~ 159 (408)
T 3g02_A 109 AVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLP--------GY---------------------TFSSGP 159 (408)
T ss_dssp CEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCT--------TS---------------------TTSCCS
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCC--------CC---------------------CCCCCC
Confidence 45799999999999999977777766531 25799999988 11 100000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-C-ceEEEecChhHHHHHHHHHHH
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-P-FDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~-~~~IlGFSQGa~vAl~la~~~ 514 (608)
. + ....++....+.+.++++..+ . ...++|+|+||++|+.+|.+.
T Consensus 160 ~----------------~-----~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~ 206 (408)
T 3g02_A 160 P----------------L-----DKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGF 206 (408)
T ss_dssp C----------------S-----SSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHC
T ss_pred C----------------C-----CCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhC
Confidence 0 0 001245666677777777765 3 468999999999999999854
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=98.79 E-value=4.7e-09 Score=113.78 Aligned_cols=85 Identities=13% Similarity=-0.107 Sum_probs=58.3
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcccc-----ccCCCCCCEEEEEcCCCCCCcccch---
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEF-----EHRSINCPSLHIFGGDLGNDRQVAN--- 564 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~-----~~~~i~~PvL~i~G~~~~~D~~Vp~--- 564 (608)
....|+||||||.+|+.+|.+. +..++.++++++..|..... .......|+.+|||. .|++||.
T Consensus 146 ~~i~lvGhSlGg~vA~~~a~~~-----p~~v~~iv~l~pa~p~~~~~~~~~~l~~~da~~V~vIHt~---~d~lVP~~~~ 217 (432)
T 1gpl_A 146 ENVHIIGHSLGAHTAGEAGKRL-----NGLVGRITGLDPAEPYFQDTPEEVRLDPSDAKFVDVIHTD---ISPILPSLGF 217 (432)
T ss_dssp GGEEEEEETHHHHHHHHHHHTT-----TTCSSEEEEESCBCTTTTTCCTTTSCCGGGSSEEEEECSC---CSCHHHHCCC
T ss_pred ccEEEEEeCHHHHHHHHHHHhc-----ccccceeEEeccccccccCCChhhccCcCCCceEEEEEcC---Cccccccccc
Confidence 3458999999999999888743 45689999998877654321 122344689999999 8999985
Q ss_pred HHHHHHHHHhccCCcEEEEeCCCCcCCC
Q 007311 565 QASKELAKAFEEGCSVIIEHDCGHIIPT 592 (608)
Q Consensus 565 ~~~~~l~~~~~~~~~~vv~~~gGH~ip~ 592 (608)
...+ .-....+..++||..|.
T Consensus 218 g~~~-------~lg~~dfypngg~~qpg 238 (432)
T 1gpl_A 218 GMSQ-------KVGHMDFFPNGGKDMPG 238 (432)
T ss_dssp BCSS-------CCSSEEEEEGGGSSCTT
T ss_pred cccc-------cccceEEccCCCCCCCC
Confidence 2211 11233455678997665
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.1e-08 Score=116.05 Aligned_cols=187 Identities=13% Similarity=0.070 Sum_probs=113.9
Q ss_pred CCccEEEEecCCCCChH--HHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec-
Q 007311 370 RRKLRILCLHGFRQNAS--SFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV- 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~--~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~- 446 (608)
.+.|.||++||...+.. .|......|++ .++.++.+|.+ .+. ..+..|..
T Consensus 507 ~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~R--------G~g----------------~~G~~~~~~ 559 (751)
T 2xe4_A 507 QPQPCMLYGYGSYGLSMDPQFSIQHLPYCD---RGMIFAIAHIR--------GGS----------------ELGRAWYEI 559 (751)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCGGGHHHHT---TTCEEEEECCT--------TSC----------------TTCTHHHHT
T ss_pred CCccEEEEECCCCCcCCCCcchHHHHHHHh---CCcEEEEEeeC--------CCC----------------CcCcchhhc
Confidence 34688999999776543 35433334443 47999999866 110 01224433
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
... ..| .....+++.+++++|.+.-.......+|+|+|+||.+++.++.+. +..++++
T Consensus 560 ~~~------~~~-----------~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~-----p~~~~a~ 617 (751)
T 2xe4_A 560 GAK------YLT-----------KRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMR-----PDLFKVA 617 (751)
T ss_dssp TSS------GGG-----------THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----GGGCSEE
T ss_pred ccc------ccc-----------cCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhC-----chheeEE
Confidence 110 000 011233444444444332101124568999999999999999854 3468899
Q ss_pred EEecCCCCCcc-----------------------c-----------cccCCCCCC-EEEEEcCCCCCCcccchHHHHHHH
Q 007311 527 ILCSGFALHSA-----------------------E-----------FEHRSINCP-SLHIFGGDLGNDRQVANQASKELA 571 (608)
Q Consensus 527 IlisG~~~~~~-----------------------~-----------~~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~ 571 (608)
|+.+++..... + .....+++| +|++||. +|..||+..+.+++
T Consensus 618 v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~---~D~~vp~~~~~~~~ 694 (751)
T 2xe4_A 618 LAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGL---HDPRVAYWEPAKWV 694 (751)
T ss_dssp EEESCCCCHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEET---TCSSSCTHHHHHHH
T ss_pred EEeCCcchHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeC---CCCCCCHHHHHHHH
Confidence 99887642110 0 122457887 9999999 89999999999999
Q ss_pred HHhccC---C--cEEEE-eCCCCcCCCChh----hHHHHHHHHHHhC
Q 007311 572 KAFEEG---C--SVIIE-HDCGHIIPTRSP----YIDEIKSFLQRFL 608 (608)
Q Consensus 572 ~~~~~~---~--~~vv~-~~gGH~ip~~~~----~~~~i~~Fl~~~L 608 (608)
+.+... . ..+.+ .++||.+....+ ....+.+||.+.|
T Consensus 695 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l 741 (751)
T 2xe4_A 695 SKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHL 741 (751)
T ss_dssp HHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHh
Confidence 888642 1 23333 467999865432 3456888988754
|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=5.5e-09 Score=114.51 Aligned_cols=95 Identities=14% Similarity=0.118 Sum_probs=76.0
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
-+.|+++++.+++++ + +|||||++.||..|||+| +++.+.. ..|..++.... .++++
T Consensus 272 ~~~is~~~l~~~l~~--------------~-~iiD~R~~~~y~~ghIpG----A~~i~~~--~~~~~~~~~l~--~~~~~ 328 (474)
T 3tp9_A 272 RVDLPPERVRAWREG--------------G-VVLDVRPADAFAKRHLAG----SLNIPWN--KSFVTWAGWLL--PADRP 328 (474)
T ss_dssp ECCCCGGGHHHHHHT--------------S-EEEECSCHHHHHHSEETT----CEECCSS--TTHHHHHHHHC--CSSSC
T ss_pred CceeCHHHHHHHhCC--------------C-EEEECCChHHHhccCCCC----eEEECcc--hHHHHHHHhcC--CCCCe
Confidence 357899999999964 3 999999999999999999 5554422 14666666543 57899
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|. +.+++.+|+.. ||++|+.+.+|+.+|.++
T Consensus 329 vvvy~~~~~-~~~~~~~L~~~--G~~~v~~~l~G~~~W~~~ 366 (474)
T 3tp9_A 329 IHLLAADAI-APDVIRALRSI--GIDDVVDWTDPAAVDRAA 366 (474)
T ss_dssp EEEECCTTT-HHHHHHHHHHT--TCCCEEEEECGGGGTTCC
T ss_pred EEEEECCCc-HHHHHHHHHHc--CCcceEEecCcHHHHHhc
Confidence 999999887 55588899986 999999977799999753
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=4.4e-08 Score=100.50 Aligned_cols=88 Identities=13% Similarity=-0.016 Sum_probs=61.9
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------c--ccCCCCCCEEEEEcCCCCCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------F--EHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------~--~~~~i~~PvL~i~G~~~~~D 559 (608)
..+|+||||||.+|+.++.+. +..++++|++||....... . ......+++++.+|+ +|
T Consensus 159 ~~~i~G~S~GG~~al~~a~~~-----p~~f~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~---~D 230 (297)
T 1gkl_A 159 HRGFGGFAMGGLTTWYVMVNC-----LDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGS---ED 230 (297)
T ss_dssp GEEEEEETHHHHHHHHHHHHH-----TTTCCEEEEESCCCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEET---TC
T ss_pred ceEEEEECHHHHHHHHHHHhC-----chhhheeeEeccccccCCccchhhhHHHHHHhhccCCcCcEEEEEEeCC---Cc
Confidence 357999999999999999855 4579999999987543210 0 112235667778899 78
Q ss_pred cccchHHHHHHHHHhccC------------CcEEEEeCC-CCcCC
Q 007311 560 RQVANQASKELAKAFEEG------------CSVIIEHDC-GHIIP 591 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~------------~~~vv~~~g-GH~ip 591 (608)
..+ ...+++.+.+... ..++.++++ ||...
T Consensus 231 ~~~--~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~g~gH~~~ 273 (297)
T 1gkl_A 231 IAY--ANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWG 273 (297)
T ss_dssp TTH--HHHHHHHHHHHTSTTCCBBSCTTTCCEEEEEETTCCSSHH
T ss_pred ccc--hhHHHHHHHHHHcCCccccccccCCceEEEECCCCCcCHH
Confidence 764 4677777777643 356677776 89753
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.70 E-value=5.5e-07 Score=95.74 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=48.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC-cEEEEeCC---CCcCCCChhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC-SVIIEHDC---GHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~-~~vv~~~g---GH~ip~~~~~~~~i~~Fl~~~ 607 (608)
.+++|+|++||. +|.+||.+.++++++.+.... ++++.+++ +|.... ......+.+||.++
T Consensus 305 ~~~~Pvli~hG~---~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~~-~~~~~~~~~wl~~~ 369 (377)
T 4ezi_A 305 KPTAPLLLVGTK---GDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQAH-PFVLKEQVDFFKQF 369 (377)
T ss_dssp CCSSCEEEEECT---TCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTTTH-HHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecC---CCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccChH-HHHHHHHHHHHHHh
Confidence 568999999999 899999999999998776432 56666665 787643 34678899999875
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=98.67 E-value=4.2e-08 Score=99.93 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=63.2
Q ss_pred EEEEecCCCCCh---HHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 374 RILCLHGFRQNA---SSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 374 ~iLlLHG~G~na---~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.|||+||+|++. ..|......|.+.. ++++++.+|.-+..+ ......|+
T Consensus 7 pvVllHG~~~~~~~~~~~~~~~~~L~~~~-~g~~v~~~d~G~g~s----------------------~~~~~~~~----- 58 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKI-PGIHVLSLEIGKTLR----------------------EDVENSFF----- 58 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHS-TTCCEEECCCSSSHH----------------------HHHHHHHH-----
T ss_pred cEEEECCCCCCCCCcccHHHHHHHHHHHC-CCcEEEEEEeCCCCc----------------------cccccccc-----
Confidence 499999999998 88996655665543 246888886321100 00001121
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
..+.+.++.+.+.+.. ......|+||||||.+|..++.+.+ ..+++.+|
T Consensus 59 ------------------------~~~~~~~~~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~----~~~v~~lv 110 (279)
T 1ei9_A 59 ------------------------LNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCP----SPPMVNLI 110 (279)
T ss_dssp ------------------------SCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCC----SSCEEEEE
T ss_pred ------------------------cCHHHHHHHHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcC----CcccceEE
Confidence 1233444444444443 2244589999999999999998542 23599999
Q ss_pred EecC
Q 007311 528 LCSG 531 (608)
Q Consensus 528 lisG 531 (608)
++++
T Consensus 111 ~~~~ 114 (279)
T 1ei9_A 111 SVGG 114 (279)
T ss_dssp EESC
T ss_pred EecC
Confidence 9885
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=98.64 E-value=2.4e-07 Score=107.23 Aligned_cols=107 Identities=17% Similarity=0.190 Sum_probs=81.0
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC-----------------Cc--------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL-----------------HS-------------------- 536 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~-----------------~~-------------------- 536 (608)
.++++|+|+||.+++.+|.. .+..++++|..++... +.
T Consensus 341 rVgl~G~SyGG~ial~~Aa~-----~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 415 (763)
T 1lns_A 341 KVAMTGKSYLGTMAYGAATT-----GVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADF 415 (763)
T ss_dssp EEEEEEETHHHHHHHHHHTT-----TCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHH
T ss_pred cEEEEEECHHHHHHHHHHHh-----CCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchh
Confidence 45899999999999999873 3456899988776430 00
Q ss_pred --------------------c-------------ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc-CCcEEE
Q 007311 537 --------------------A-------------EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSVII 582 (608)
Q Consensus 537 --------------------~-------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~-~~~~vv 582 (608)
. .....+|++|+|++||. +|..+|...+.++++.+.. ....++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~---~D~~vp~~~a~~l~~al~~~~~~~l~ 492 (763)
T 1lns_A 416 LKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGL---QDWNVTPEQAYNFWKALPEGHAKHAF 492 (763)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEET---TCCSSCTHHHHHHHHHSCTTCCEEEE
T ss_pred hhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEEC---CCCCCChHHHHHHHHhhccCCCeEEE
Confidence 0 01134689999999999 8999999999999999974 235677
Q ss_pred EeCCCCcCCCC---hhhHHHHHHHHHHhC
Q 007311 583 EHDCGHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 583 ~~~gGH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
.+++||..+.. ..+.+.+.+||.++|
T Consensus 493 i~~~gH~~~~~~~~~~~~~~i~~Ffd~~L 521 (763)
T 1lns_A 493 LHRGAHIYMNSWQSIDFSETINAYFVAKL 521 (763)
T ss_dssp EESCSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred EeCCcccCccccchHHHHHHHHHHHHHHh
Confidence 78899987543 247889999998764
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.7e-08 Score=107.64 Aligned_cols=71 Identities=17% Similarity=0.077 Sum_probs=49.0
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------------------------------c
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------------------------------F 539 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------------------------------~ 539 (608)
.++|+||||||.+|+.++.. ...++++|+.+++...... .
T Consensus 226 rI~v~G~S~GG~~al~~a~~------~~~i~a~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~d~~~~ 299 (391)
T 3g8y_A 226 RIVISGFSLGTEPMMVLGVL------DKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDV 299 (391)
T ss_dssp EEEEEEEGGGHHHHHHHHHH------CTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTGGGTCCHHHH
T ss_pred eEEEEEEChhHHHHHHHHHc------CCceeEEEEccCCCCcccchhhcccccccccccccccHHHhCccHHhhCCHHHH
Confidence 45799999999999988874 3568888877654433100 0
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
.......|+|++||+ +|+++ +..+++++...
T Consensus 300 ~~~~ap~P~LiihG~---~D~~v--~~~~~~~~~~g 330 (391)
T 3g8y_A 300 VASLAPRPIIFTEGG---LDRDF--RLVQSAYAASG 330 (391)
T ss_dssp HHTTTTSCEEECSCB---CHHHH--HHHHHHHHHTT
T ss_pred HHhhcCCCEEEEcCC---ccHHH--HHHHHHHHHcC
Confidence 011235799999999 89987 55666666554
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=7.3e-07 Score=92.27 Aligned_cols=172 Identities=15% Similarity=0.060 Sum_probs=100.8
Q ss_pred CCccEEEEecCCCCCh-HHHH-HHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNA-SSFK-GRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na-~~f~-~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+++.|||+||++.+. ..|. .....|.+ .+++++.+|.|- +.+-+
T Consensus 63 ~~~~pVVLvHG~~~~~~~~w~~~l~~~L~~---~Gy~V~a~DlpG-----------------------------~G~~~- 109 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQSFDSNWIPLSAQ---LGYTPCWISPPP-----------------------------FMLND- 109 (316)
T ss_dssp BCSSEEEEECCTTCCHHHHHTTTHHHHHHH---TTCEEEEECCTT-----------------------------TTCSC-
T ss_pred CCCCeEEEECCCCCCcHHHHHHHHHHHHHH---CCCeEEEecCCC-----------------------------CCCCc-
Confidence 3456799999999998 6775 33444443 368999998771 00000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.....++..+++.++++..+ ....|+||||||.+|..++..+. .....++.+
T Consensus 110 -------------------------~~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p--~~~~~V~~l 162 (316)
T 3icv_A 110 -------------------------TQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFP--SIRSKVDRL 162 (316)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCG--GGTTTEEEE
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhcc--ccchhhceE
Confidence 00112233344445555555 55689999999999976665432 125679999
Q ss_pred EEecCCCCCcc----------------c-----------c--ccCCCCCCEEEEEcCCCCCCcccchHH--HHHHHHHhc
Q 007311 527 ILCSGFALHSA----------------E-----------F--EHRSINCPSLHIFGGDLGNDRQVANQA--SKELAKAFE 575 (608)
Q Consensus 527 IlisG~~~~~~----------------~-----------~--~~~~i~~PvL~i~G~~~~~D~~Vp~~~--~~~l~~~~~ 575 (608)
|++++...-.. + . ......+|+..|+.. .|.+|.+.. +..-...+.
T Consensus 163 V~lapp~~Gt~~a~l~~~~~~~~~a~~q~~~gS~fl~~Ln~~~~~~~~v~~tsI~S~---~D~iV~P~~~~g~~as~~L~ 239 (316)
T 3icv_A 163 MAFAPDYKGTVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIVPTTNLYSA---TDEIVQPQVSNSPLDSSYLF 239 (316)
T ss_dssp EEESCCTTCBSCC------CCCCHHHHHTBTTCHHHHHHHHTTTTBCSSCEEEEECT---TCSSSCCCCSSSTTSTTCCB
T ss_pred EEECCCCCCchhhhhhhhccccChhHHhhCCCCHHHHHHhhcCCCCCCCcEEEEEcC---CCCCccCCcccCcccceecC
Confidence 99886532110 0 0 112346899999999 899985544 111112233
Q ss_pred cCCcEEEEe-------CCCCc-CCCChhhHHHHHHHHH
Q 007311 576 EGCSVIIEH-------DCGHI-IPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 576 ~~~~~vv~~-------~gGH~-ip~~~~~~~~i~~Fl~ 605 (608)
.. ..+... ..+|. ++.++.....+.+.|.
T Consensus 240 g~-~Ni~vqd~Cp~~~~~~H~~~~~dp~v~~~V~~aL~ 276 (316)
T 3icv_A 240 NG-KNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSALR 276 (316)
T ss_dssp TS-EEEEHHHHHCTTCCCCTTHHHHBHHHHHHHHHHHH
T ss_pred CC-ceEEEeccCCCCCccCCcCccCCHHHHHHHHHHhc
Confidence 22 333332 35886 5555566777777764
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=2.3e-07 Score=100.99 Aligned_cols=115 Identities=12% Similarity=0.142 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCC
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGD 555 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~ 555 (608)
+++..+.+..+++..+ ....|+||||||++|+.++.+.+. ....++++|++++..... .....++|.++|.
T Consensus 111 ~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe--~~~~V~~LVlIapp~~~d-----~p~g~~~L~ilG~- 182 (484)
T 2zyr_A 111 FSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPE--RAAKVAHLILLDGVWGVD-----APEGIPTLAVFGN- 182 (484)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHH--HHHTEEEEEEESCCCSEE-----CCTTSCEEEEEEC-
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCcc--chhhhCEEEEECCccccc-----cCcCCHHHHHhCC-
Confidence 3444445555555544 455899999999999999985421 013699999999865421 1345789999997
Q ss_pred CCCCcc--cchHHHHHHHHHhccCCcEEEEeCCCCc-CCCChhhHHHHHHHHHH
Q 007311 556 LGNDRQ--VANQASKELAKAFEEGCSVIIEHDCGHI-IPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 556 ~~~D~~--Vp~~~~~~l~~~~~~~~~~vv~~~gGH~-ip~~~~~~~~i~~Fl~~ 606 (608)
.|.. ++...+ .++.+...++..+.+|. +..+++..+.+.+||..
T Consensus 183 --~d~~p~V~~pss-----~L~~ga~~v~i~~a~H~~ll~dp~v~~~Vl~fL~~ 229 (484)
T 2zyr_A 183 --PKALPALGLPEE-----KVVYNATNVYFNNMTHVQLCTSPETFAVMFEFING 229 (484)
T ss_dssp --GGGSCCSSCCSS-----CCEETSEEEEETTCCHHHHHHCHHHHHHHHHHHHS
T ss_pred --CCcCCcccChhH-----hcCCCceEEEECCCCccccccCHHHHHHHHHHhcc
Confidence 4421 110000 22312244555667997 55566678889999864
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2e-06 Score=92.07 Aligned_cols=104 Identities=15% Similarity=-0.002 Sum_probs=76.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc------c------c--ccCCCCCCEEEEEcCCCCCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------E------F--EHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------~------~--~~~~i~~PvL~i~G~~~~~D 559 (608)
..+|+|+||||.+|+.++... +..++++|++||..-... . . .......|+++++|+ .|
T Consensus 277 ~~~l~G~S~GG~~al~~a~~~-----p~~f~~~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~---~D 348 (403)
T 3c8d_A 277 RTVVAGQSFGGLSALYAGLHW-----PERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGI---RE 348 (403)
T ss_dssp GCEEEEETHHHHHHHHHHHHC-----TTTCCEEEEESCCTTTTCTTSSSCCHHHHHHHTTSSCCCSCEEEEEEES---SC
T ss_pred ceEEEEECHHHHHHHHHHHhC-----chhhcEEEEeccccccCCCCCCcHHHHHHHHHhccccCCCceEEEEeeC---CC
Confidence 457999999999999999854 567999999998763211 0 0 113567899999999 67
Q ss_pred cccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHHHHH
Q 007311 560 RQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
..+ .+.++++++.++.. .+++.++++||........+.++.+||.+
T Consensus 349 ~~~-~~~~~~l~~~L~~~G~~v~~~~~~GgH~~~~w~~~l~~~l~~l~~ 396 (403)
T 3c8d_A 349 PMI-MRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLWQ 396 (403)
T ss_dssp HHH-HHHHHHHHHHTGGGTTSEEEEEESCCSCHHHHHHHHHHHHHHHHG
T ss_pred chh-HHHHHHHHHHHHhCCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhc
Confidence 654 57888999988753 36778888899875544566777777754
|
| >3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.43 E-value=3.1e-07 Score=95.63 Aligned_cols=108 Identities=18% Similarity=0.237 Sum_probs=73.8
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh-----------ccccCCCCcccc----CcccccCCCchH
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR-----------IGKFRTPSVETL----DPEIRQFSDLPT 195 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l----~~~~~~~~~~~~ 195 (608)
.++.+++.+.++.+ ...++++|||+|...||. .|||+|+.+.+. ++....+..-.+
T Consensus 185 v~~~~~v~~~v~~~---------~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e 255 (327)
T 3utn_X 185 IVDYEEMFQLVKSG---------ELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGE 255 (327)
T ss_dssp EECHHHHHHHHHTT---------CHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTH
T ss_pred eecHHHHhhhhhcc---------cccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHH
Confidence 46778888888652 011357899999999995 599999432211 111111111111
Q ss_pred H----HHhh-----hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 W----IDNN-----AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~----~~~~-----~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
. +++. ...+++|+||+||.+|+|+......|+.. ||+||....|+...|...
T Consensus 256 ~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~l--G~~~v~lYdGSWsEW~~r 316 (327)
T 3utn_X 256 AIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELA--GVPNVRLYDGSWTEWVLK 316 (327)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHT--TCCSEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHc--CCCCceeCCCcHHHhccc
Confidence 1 2211 12457899999999999999888888876 999999999999999865
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=5.2e-06 Score=85.37 Aligned_cols=108 Identities=18% Similarity=0.061 Sum_probs=72.3
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------------------cccC-CCCC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------------------FEHR-SINC 546 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------------------~~~~-~i~~ 546 (608)
.+|.|+||||.-|+.++++.+. +..+.++...|+...+... .... .-..
T Consensus 155 ~~i~G~SMGG~gAl~~al~~~~---~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~ 231 (299)
T 4fol_A 155 VAITGISMGGYGAICGYLKGYS---GKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDD 231 (299)
T ss_dssp EEEEEBTHHHHHHHHHHHHTGG---GTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTC
T ss_pred eEEEecCchHHHHHHHHHhCCC---CCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCC
Confidence 4799999999999999996532 3456777777776543221 0111 2246
Q ss_pred CEEEEEcCCCCCCcccchH-HHHHHHHHhccC----CcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 547 PSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG----CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 547 PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~----~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
|+++-.|+ +|..+... ..+.+.+.++.. ..++.+++| +|....-..++++-.+|..++|
T Consensus 232 ~i~id~G~---~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f~~~fi~dhl~fha~~L 296 (299)
T 4fol_A 232 RILIHVGD---SDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNL 296 (299)
T ss_dssp CEEEEEET---TCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEecC---CCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 78888999 78776432 124566666542 246677787 8986555568888889988775
|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.7e-07 Score=100.87 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=59.7
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||||+..||+.|||+| +++.+.. ..|..|+... ..++++||+||. +.++.++...|+.. ||++|
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpG----Av~ip~~--~~~~~~~~~~--~~~~~~vvly~~-~~~a~~a~~~L~~~--G~~~v 363 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEG----TINIPYD--KNFINQIGWY--LNYDQEINLIGD-YHLVSKATHTLQLI--GYDDI 363 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTT----CEECCSS--TTHHHHHTTT--CCTTSCEEEESC-HHHHHHHHHHHHTT--TCCCE
T ss_pred CCeEEEECCCHHHHhhCCCCC----cEECCcc--HHHHHHHHhc--cCCCCeEEEEEC-CchHHHHHHHhhhh--hcccc
Confidence 679999999999999999999 4544422 1466665432 268899999999 45899999999987 99999
Q ss_pred EE-cCccHHHHHHhCCCCCeeceeeeeeeeccc
Q 007311 237 FQ-LYGGIQRYLEQFPDGGFFKGKNFVFDHRIS 268 (608)
Q Consensus 237 ~~-L~GGi~~w~~~~~~~~~~~G~~fVFD~R~~ 268 (608)
+. |.||...|...+-...+=.++..|+|-|-.
T Consensus 364 ~~~l~g~~~~~~~~~~~~~~~~~~~~liDvR~~ 396 (466)
T 3r2u_A 364 AGYQLPQSKIQTRSIHSEDITGNESHILDVRND 396 (466)
T ss_dssp EEEECCC--------------------------
T ss_pred cccccCcccccHHHHHHHHHhCCCcEEEEeCCH
Confidence 98 777766655332111111244567777754
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=98.27 E-value=3.7e-06 Score=95.03 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=81.3
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC-c----------------
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH-S---------------- 536 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~-~---------------- 536 (608)
.+++.+++++|.+........++++|+|+||.+++.+|.. .+..++++|.+++.... .
T Consensus 125 ~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~-----~~~~l~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~ 199 (615)
T 1mpx_A 125 ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTN-----PHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFD 199 (615)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTS-----CCTTEEEEEEESCCCCTTTTSSSEETTEEBGGGHH
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhc-----CCCceEEEEecCCccccccccccccCCeehhhhHH
Confidence 4566666776655411111256899999999999998863 34568888876554331 0
Q ss_pred ----------------------------------------c---------------c---------cccCC--CCCCEEE
Q 007311 537 ----------------------------------------A---------------E---------FEHRS--INCPSLH 550 (608)
Q Consensus 537 ----------------------------------------~---------------~---------~~~~~--i~~PvL~ 550 (608)
. + ....+ |++|+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Li 279 (615)
T 1mpx_A 200 YFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMW 279 (615)
T ss_dssp HHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEE
T ss_pred HHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcChhhhhhccCCCCCEEE
Confidence 0 0 01235 9999999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccC-----CcEEEEeCCCCcC-CC------C-----h---hh-HHHHHHHHHHhC
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEG-----CSVIIEHDCGHII-PT------R-----S---PY-IDEIKSFLQRFL 608 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~-----~~~vv~~~gGH~i-p~------~-----~---~~-~~~i~~Fl~~~L 608 (608)
|||. +|.. +...+.++++.++.. ...++.++.+|.. .. . . .. .+.+.+||.++|
T Consensus 280 i~G~---~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~L 354 (615)
T 1mpx_A 280 LQGL---WDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFDQYL 354 (615)
T ss_dssp EEET---TCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHH
T ss_pred eecc---cCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCCCCCCccccccccCccccCcccchhhhhhHHHHHHHHHh
Confidence 9999 8886 666777777777742 2577777778965 20 0 0 11 466788988764
|
| >3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.6e-06 Score=90.29 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=71.2
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--------Ch-hhh-hccccCCCCccccCcccccCCC-------
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--------NL-YET-RIGKFRTPSVETLDPEIRQFSD------- 192 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--------n~-~E~-~~Gh~~g~~~~~l~~~~~~~~~------- 192 (608)
+-|||++++++|++. ....+|+||++ +. .|| +.|||+|+...-+ +.+++
T Consensus 28 ~LIsp~~l~~ll~~~----------~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dl----d~~~d~~~~~ph 93 (327)
T 3utn_X 28 DLISPKAFVKLVASE----------KVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDI----DAISDKKSPYPH 93 (327)
T ss_dssp EEECHHHHHHHHHHC----------SSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCT----TTSSCTTSSSTT
T ss_pred cccCHHHHHHHHhCC----------CCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeCh----HHhcCCCCCCCC
Confidence 469999999999863 22569999984 43 577 7899999642112 22211
Q ss_pred -ch--HHHHhh---hhhcCCCeEEEEcCCCcc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 193 -LP--TWIDNN---AEQLQGKHVLMYCTGGIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 193 -~~--~~~~~~---~~~~k~k~Iv~yCtgGiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+| +.+.+. +...++.+||+|-.+|.- +.++.-.|+-. |+++|+.|.|| .+|.++
T Consensus 94 ~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~--Gh~~V~vLdGg-~aW~~~ 154 (327)
T 3utn_X 94 MFPTKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVM--GHPKVYLLNNF-NQYREF 154 (327)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHT--TCSEEEEESCH-HHHHHT
T ss_pred CCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHc--CCCceeecccH-HHHHHh
Confidence 22 222222 345789999999987765 55666667765 99999999987 899875
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2.5e-06 Score=88.49 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=65.0
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCcc-EEEEecCCCCCc-----------------c--c---c-----c---cC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFR-FAILCSGFALHS-----------------A--E---F-----E---HR 542 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~-~vIlisG~~~~~-----------------~--~---~-----~---~~ 542 (608)
++.|.||||||+||+.++..+ +..++ ++++++|.+... . + . . ..
T Consensus 12 RI~v~G~S~GG~mA~~~a~~~-----p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 86 (318)
T 2d81_A 12 SVSVSGLASGGYMAAQLGVAY-----SDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASVA 86 (318)
T ss_dssp EEEEEEETHHHHHHHHHHHHT-----TTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCGG
T ss_pred eEEEEEECHHHHHHHHHHHHC-----chhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChhH
Confidence 457999999999999999854 55688 888877632100 0 0 0 0 00
Q ss_pred C-CCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC----cEEEEeC-CCCcCCC
Q 007311 543 S-INCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC----SVIIEHD-CGHIIPT 592 (608)
Q Consensus 543 ~-i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~----~~vv~~~-gGH~ip~ 592 (608)
. -..|+|++||+ +|++||++.++++++.++... ++++.++ .||.++.
T Consensus 87 ~l~~~Pvli~HG~---~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~ 139 (318)
T 2d81_A 87 NLGQRKIYMWTGS---SDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GGGGCEEEEEEET---TCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred cCCCCcEEEEeCC---CCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCcc
Confidence 1 23699999999 899999999999999887532 4666665 5998654
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.5e-06 Score=94.63 Aligned_cols=38 Identities=18% Similarity=-0.030 Sum_probs=31.3
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
....|+||||||.+|+.++.+. +..++++|++++..|.
T Consensus 146 ~~i~LvGhSlGg~vA~~~a~~~-----p~~v~~iv~ldpa~p~ 183 (452)
T 1w52_X 146 ENVHIIGHSLGAHTAGEAGRRL-----EGRVGRVTGLDPAEPC 183 (452)
T ss_dssp GGEEEEEETHHHHHHHHHHHHT-----TTCSSEEEEESCBCTT
T ss_pred ccEEEEEeCHHHHHHHHHHHhc-----ccceeeEEeccccccc
Confidence 3458999999999999999854 4579999999877664
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=2e-06 Score=93.55 Aligned_cols=38 Identities=13% Similarity=-0.043 Sum_probs=31.5
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
....|+||||||.+|+.+|.+. +..++++|++++..|.
T Consensus 146 ~~i~LvGhSlGg~vA~~~a~~~-----p~~v~~iv~ldpa~p~ 183 (452)
T 1bu8_A 146 ENVHLIGHSLGAHVVGEAGRRL-----EGHVGRITGLDPAEPC 183 (452)
T ss_dssp GGEEEEEETHHHHHHHHHHHHT-----TTCSSEEEEESCBCTT
T ss_pred cceEEEEEChhHHHHHHHHHhc-----ccccceEEEecCCccc
Confidence 4458999999999999999854 4579999999877664
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.4e-06 Score=92.87 Aligned_cols=39 Identities=13% Similarity=-0.112 Sum_probs=31.8
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
....|+||||||.+|+.++.+. +..++.+|++.+..|..
T Consensus 145 ~~v~LIGhSlGg~vA~~~a~~~-----p~~v~~iv~Ldpa~p~f 183 (449)
T 1hpl_A 145 SNVHIIGHSLGSHAAGEAGRRT-----NGAVGRITGLDPAEPCF 183 (449)
T ss_dssp GGEEEEEETHHHHHHHHHHHHT-----TTCSSEEEEESCBCTTT
T ss_pred ccEEEEEECHhHHHHHHHHHhc-----chhcceeeccCcccccc
Confidence 3458999999999999999854 45699999998777654
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.18 E-value=3e-06 Score=85.39 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=71.4
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----c------c--cCCCCCCEEEEEcCCCCCCcc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----F------E--HRSINCPSLHIFGGDLGNDRQ 561 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----~------~--~~~i~~PvL~i~G~~~~~D~~ 561 (608)
..+|+||||||.+|+.++... +..++++|++|+....... . . ......|+++++|+ .|..
T Consensus 153 ~~~~~G~S~GG~~a~~~~~~~-----p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~---~D~~ 224 (275)
T 2qm0_A 153 KQTLFGHXLGGLFALHILFTN-----LNAFQNYFISSPSIWWNNKSVLEKEENLIIELNNAKFETGVFLTVGS---LERE 224 (275)
T ss_dssp EEEEEEETHHHHHHHHHHHHC-----GGGCSEEEEESCCTTHHHHGGGGGTTHHHHHHHTCSSCEEEEEEEET---TSCH
T ss_pred CCEEEEecchhHHHHHHHHhC-----chhhceeEEeCceeeeChHHHHHHHHHHHhhhcccCCCceEEEEeCC---cccc
Confidence 447999999999999999854 3468999999988643211 0 0 34567899999999 8888
Q ss_pred cchHHHHHHHHHh---ccCC--cEEEEeCC-CCcCCCChhhHHHHHHHH
Q 007311 562 VANQASKELAKAF---EEGC--SVIIEHDC-GHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 562 Vp~~~~~~l~~~~---~~~~--~~vv~~~g-GH~ip~~~~~~~~i~~Fl 604 (608)
++...++++++.+ .... .++.++++ +|.. .....+....+||
T Consensus 225 ~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~-~~~~~l~~~l~~l 272 (275)
T 2qm0_A 225 HMVVGANELSERLLQVNHDKLKFKFYEAEGENHAS-VVPTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTT-HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhcccCCceEEEEECCCCCccc-cHHHHHHHHHHHH
Confidence 8889999999988 4322 45556666 5543 2233444555554
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-06 Score=91.45 Aligned_cols=71 Identities=13% Similarity=0.071 Sum_probs=46.9
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc--------------------c--------------c
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA--------------------E--------------F 539 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~--------------------~--------------~ 539 (608)
..+|+||||||.+|+.++.+ ...++++|.++....... . .
T Consensus 231 rI~v~G~S~GG~~a~~~aa~------~~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 304 (398)
T 3nuz_A 231 RIVVSGFSLGTEPMMVLGTL------DTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDI 304 (398)
T ss_dssp EEEEEEEGGGHHHHHHHHHH------CTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTHHHHCCHHHH
T ss_pred eEEEEEECHhHHHHHHHHhc------CCcEEEEEEecccccchhhhhhhccccccccccCCccHHHhcchHhhhCCHHHH
Confidence 45799999999999988874 356888888543221000 0 0
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
.......|+|++||. .|..+ +..+++++.+.
T Consensus 305 ~~~~ap~PlLii~G~---~D~~v--~~~~~~y~~~g 335 (398)
T 3nuz_A 305 VAALAPRPIILTEGG---LDRDL--DLVRKAYAIVG 335 (398)
T ss_dssp HHHTTTSCEEECSCB---CHHHH--HHHHHHHHHHT
T ss_pred HHhhCCCcEEEeeCC---chHHH--HHHHHHHHHcC
Confidence 011235799999999 78665 56667766664
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.11 E-value=4.6e-06 Score=90.60 Aligned_cols=38 Identities=13% Similarity=-0.024 Sum_probs=30.7
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
....|+||||||.+|+.++.+. +. ++.+|++.+..|..
T Consensus 146 ~~v~LVGhSlGg~vA~~~a~~~-----p~-v~~iv~Ldpa~p~f 183 (450)
T 1rp1_A 146 SQVQLIGHSLGAHVAGEAGSRT-----PG-LGRITGLDPVEASF 183 (450)
T ss_dssp GGEEEEEETHHHHHHHHHHHTS-----TT-CCEEEEESCCCTTT
T ss_pred hhEEEEEECHhHHHHHHHHHhc-----CC-cccccccCcccccc
Confidence 3458999999999999999843 34 99999998877654
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.10 E-value=3.1e-05 Score=80.72 Aligned_cols=100 Identities=9% Similarity=-0.050 Sum_probs=68.8
Q ss_pred HHHHHHhHhCCc---eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------cccCCCCCCEE
Q 007311 483 YLKTIFSQEGPF---DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------FEHRSINCPSL 549 (608)
Q Consensus 483 ~L~~~i~~~~~~---~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------~~~~~i~~PvL 549 (608)
.|...|++.-+. .+|+||||||.+|+.++.. .+..|++++++||..-.... .......+|++
T Consensus 124 el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~-----~p~~F~~~~~~S~~~w~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (331)
T 3gff_A 124 ELAPSIESQLRTNGINVLVGHSFGGLVAMEALRT-----DRPLFSAYLALDTSLWFDSPHYLTLLEERVVKGDFKQKQLF 198 (331)
T ss_dssp THHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHT-----TCSSCSEEEEESCCTTTTTTHHHHHHHHHHHHCCCSSEEEE
T ss_pred HHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHh-----CchhhheeeEeCchhcCChHHHHHHHHHHhhcccCCCCeEE
Confidence 344455544332 2699999999999999983 46679999999997632211 11223568999
Q ss_pred EEEcCCCCCCc-------ccchHHHHHHHHHhccC-----CcEEEEeCC-CCcC
Q 007311 550 HIFGGDLGNDR-------QVANQASKELAKAFEEG-----CSVIIEHDC-GHII 590 (608)
Q Consensus 550 ~i~G~~~~~D~-------~Vp~~~~~~l~~~~~~~-----~~~vv~~~g-GH~i 590 (608)
+.+|+ .|. .++.+.++++.+.+... ...+.++++ +|..
T Consensus 199 l~~G~---~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~s 249 (331)
T 3gff_A 199 MAIAN---NPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQS 249 (331)
T ss_dssp EEECC---CSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTT
T ss_pred EEeCC---CCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCccc
Confidence 99999 677 46677788888887642 245566766 6864
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.6e-05 Score=88.75 Aligned_cols=126 Identities=16% Similarity=0.053 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------- 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------- 538 (608)
.+++.+++++|.+.-... ..++++|+|+||.+++.+|.. .+..++++|..++......+
T Consensus 143 ~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~-----~p~~l~aiv~~~~~~d~~~~~~~~gG~~~~~~~~~ 216 (560)
T 3iii_A 143 AEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASL-----NPPHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRF 216 (560)
T ss_dssp HHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTT-----CCTTEEEEEEESCCCBHHHHTTEETTEECCSHHHH
T ss_pred HHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhc-----CCCceEEEEecCCcccccccceecCCCCchhHHHH
Confidence 445666666654320001 345899999999999999873 35678888887765432100
Q ss_pred ------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE
Q 007311 539 ------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII 582 (608)
Q Consensus 539 ------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv 582 (608)
....+|++|+|++.|- .|..+.....-+.++.+......++
T Consensus 217 w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~~~~~I~vPvl~v~Gw---~D~~~~~~g~l~~y~~l~~~~k~l~ 293 (560)
T 3iii_A 217 WTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPLSQIKTPLLTCASW---STQGLHNRGSFEGFKQAASEEKWLY 293 (560)
T ss_dssp HHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBCCGGGCCSCEEEEEEG---GGTTTTHHHHHHHHHHCCCSSEEEE
T ss_pred HHhhhccccccccchHHHHHHHHHCCCcchHhhccCCchhhCCCCEEEeCCc---CCCcccchhHHHHHHhccccCcEEE
Confidence 0135789999999999 7864444445556666665435566
Q ss_pred EeCCCCcCCC-ChhhHHHHHHHHHHhC
Q 007311 583 EHDCGHIIPT-RSPYIDEIKSFLQRFL 608 (608)
Q Consensus 583 ~~~gGH~ip~-~~~~~~~i~~Fl~~~L 608 (608)
.|+++|+-.. ..+..+...+||..+|
T Consensus 294 ih~~~~~~~~~~~~~~~~~~~wfD~~L 320 (560)
T 3iii_A 294 VHGRKEWESYYARENLERQKSFFDFYL 320 (560)
T ss_dssp EESSCHHHHHHSHHHHHHHHHHHHHHT
T ss_pred ECCCCCcCcccChhHHHHHHHHHHHHh
Confidence 6776654110 2346778889998876
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=98.07 E-value=7.1e-06 Score=85.14 Aligned_cols=100 Identities=17% Similarity=0.130 Sum_probs=68.5
Q ss_pred CccEEEEecCCCCCh------HHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCcccee
Q 007311 371 RKLRILCLHGFRQNA------SSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFA 443 (608)
Q Consensus 371 ~~~~iLlLHG~G~na------~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (608)
.+++||++||++++. ..|. .+.+.|. .+++++.+|.|-. .
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~----~l~~~L~~~G~~V~~~d~~g~-----------------------------g 53 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWY----GIQEDLQQRGATVYVANLSGF-----------------------------Q 53 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESST----THHHHHHHTTCCEEECCCCSS-----------------------------C
T ss_pred CCCEEEEECCCCCCccccchHHHHH----HHHHHHHhCCCEEEEEcCCCC-----------------------------C
Confidence 456799999999998 6777 4555554 3689999987710 0
Q ss_pred eeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 444 WFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 444 W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
.-.. ....+++..+.+.++++..+ ....|+||||||.+++.++.+. +..
T Consensus 54 ~s~~-------------------------~~~~~~~l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~-----p~~ 103 (320)
T 1ys1_X 54 SDDG-------------------------PNGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVA-----PDL 103 (320)
T ss_dssp CSSS-------------------------TTSHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHC-----GGG
T ss_pred CCCC-------------------------CCCCHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhC-----hhh
Confidence 0000 01134455566666666654 4558999999999999998854 346
Q ss_pred ccEEEEecCCC
Q 007311 523 FRFAILCSGFA 533 (608)
Q Consensus 523 l~~vIlisG~~ 533 (608)
++++|++++..
T Consensus 104 V~~lV~i~~p~ 114 (320)
T 1ys1_X 104 VASVTTIGTPH 114 (320)
T ss_dssp EEEEEEESCCT
T ss_pred ceEEEEECCCC
Confidence 99999999853
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.06 E-value=5.4e-06 Score=84.37 Aligned_cols=96 Identities=17% Similarity=0.131 Sum_probs=66.0
Q ss_pred CccEEEEecCCCCChH-----HHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceee
Q 007311 371 RKLRILCLHGFRQNAS-----SFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAW 444 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~-----~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 444 (608)
.++.|||+||++++.. .|. .+.+.|. .+++++.+|.|- . ..
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~----~~~~~L~~~G~~v~~~d~~g--------~---------------------g~ 52 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWF----GIPSALRRDGAQVYVTEVSQ--------L---------------------DT 52 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESST----THHHHHHHTTCCEEEECCCS--------S---------------------SC
T ss_pred CCCeEEEeCCCCCCccccccccHH----HHHHHHHhCCCEEEEEeCCC--------C---------------------CC
Confidence 3567999999999864 777 4555554 368999998771 0 00
Q ss_pred eccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 445 FVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
....+++..+.+.++++..+ ....|+||||||.+++.++... +..+
T Consensus 53 ----------------------------s~~~~~~~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~-----p~~v 99 (285)
T 1ex9_A 53 ----------------------------SEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVR-----PDLI 99 (285)
T ss_dssp ----------------------------HHHHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHC-----GGGE
T ss_pred ----------------------------chhhHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhC-----hhhe
Confidence 00123444555666665554 4558999999999999998854 3469
Q ss_pred cEEEEecCC
Q 007311 524 RFAILCSGF 532 (608)
Q Consensus 524 ~~vIlisG~ 532 (608)
+++|++++.
T Consensus 100 ~~lv~i~~p 108 (285)
T 1ex9_A 100 ASATSVGAP 108 (285)
T ss_dssp EEEEEESCC
T ss_pred eEEEEECCC
Confidence 999999984
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=98.00 E-value=2.4e-05 Score=87.86 Aligned_cols=53 Identities=9% Similarity=0.010 Sum_probs=35.6
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.++..+.+++|.+.-... ..++++|+|+||.+++.+|.. .+..++++|.+++.
T Consensus 91 ~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~-----~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 91 EADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVS-----GVGGLKAIAPSMAS 143 (587)
T ss_dssp HHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTT-----CCTTEEEBCEESCC
T ss_pred hHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhh-----CCCccEEEEEeCCc
Confidence 455666666664321011 245799999999999998873 35568888887765
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.9e-05 Score=89.82 Aligned_cols=61 Identities=16% Similarity=0.204 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC----CcEEEEeCCCCcCCC-C-----------h---hh-HHHHHHH
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEEG----CSVIIEHDCGHIIPT-R-----------S---PY-IDEIKSF 603 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~----~~~vv~~~gGH~ip~-~-----------~---~~-~~~i~~F 603 (608)
|++|+|+|+|. +|.. +...+.++++.++.. ...++.++.+|.... . . .. .+.+.+|
T Consensus 286 I~~PvLiv~G~---~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~w 361 (652)
T 2b9v_A 286 PTVPMLWEQGL---WDQE-DMWGAIHAWQALKDADVKAPNTLVMGPWRHSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPF 361 (652)
T ss_dssp CCSCEEEEEET---TCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESCCTTGGGSCCSEETTEECSSCHHHHHHHHTHHHH
T ss_pred CCCCEEEEeec---CCcc-ccccHHHHHHHHHhcCCCCCCEEEECCCCCCCcccccccCCccccccccchhhhhhHHHHH
Confidence 99999999999 7875 445566666666632 256777888897511 0 0 11 4677889
Q ss_pred HHHhC
Q 007311 604 LQRFL 608 (608)
Q Consensus 604 l~~~L 608 (608)
|.++|
T Consensus 362 fd~~L 366 (652)
T 2b9v_A 362 FDEYL 366 (652)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88764
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00012 Score=79.45 Aligned_cols=61 Identities=11% Similarity=-0.041 Sum_probs=48.1
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCChhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~ 607 (608)
++++|+|++||. +|.+||.+.++++++.+... .+++.++++ +|.+.. .....++.+||.+.
T Consensus 342 ~~~~PvlI~hG~---~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~-~~~~~d~l~WL~~r 405 (462)
T 3guu_A 342 VPKFPRFIWHAI---PDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAE-IFGLVPSLWFIKQA 405 (462)
T ss_dssp CCCSEEEEEEET---TCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHH-HHTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCC---CCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCch-hhhHHHHHHHHHHH
Confidence 567899999999 89999999999999877532 366677765 998743 23578899999875
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=97.94 E-value=1e-05 Score=84.74 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
++...+.+..+++..+ ....|+||||||++|+.++.+.. .+.+++.+|++++..
T Consensus 111 ~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~---~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 111 YAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYN---NWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHT---CGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcC---chhhhcEEEEECCCc
Confidence 3444445555555544 45589999999999999998652 135689999998754
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00013 Score=89.49 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=66.9
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------------------------
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------------------------- 538 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------------------------- 538 (608)
+|+ .++|||+||.+|..+|.+.+. ....+..+++++++.+....
T Consensus 1112 gp~-~l~G~S~Gg~lA~e~A~~L~~--~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 1188 (1304)
T 2vsq_A 1112 GPL-TLFGYSAGCSLAFEAAKKLEE--QGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGL 1188 (1304)
T ss_dssp SCE-EEEEETTHHHHHHHHHHHHHH--SSCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC-------CTTTGGG
T ss_pred CCe-EEEEecCCchHHHHHHHHHHh--CCCceeEEEEecCcccccccccccccchhhHHHHHHhhhhhhhhcchhcchHH
Confidence 455 899999999999999987763 34567788888876543210
Q ss_pred --------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 539 --------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 539 --------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
.....+++|++++.|+ .|.. +......+.+.... ...++..+|+|.....++....+.+.|
T Consensus 1189 l~~~~~~~~~~~~~~~~~~~~~pv~l~~~~---~~~~-~~~~~~~W~~~~~~-~~~~~~v~G~H~~ml~~~~~~~~a~~l 1263 (1304)
T 2vsq_A 1189 KQKTHAFYSYYVNLISTGQVKADIDLLTSG---ADFD-IPEWLASWEEATTG-VYRMKRGFGTHAEMLQGETLDRNAEIL 1263 (1304)
T ss_dssp HHHHHHHHHHHHC-----CBSSEEEEEECS---SCCC-CCSSEECSSTTBSS-CCCEEECSSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCcCCCEEEEEec---Cccc-cccchhhHHHHhCC-CeEEEEeCCCHHHHCCCHHHHHHHHHH
Confidence 0114678999999998 5542 22222233333333 367788889997555555555544444
Q ss_pred H
Q 007311 605 Q 605 (608)
Q Consensus 605 ~ 605 (608)
.
T Consensus 1264 ~ 1264 (1304)
T 2vsq_A 1264 L 1264 (1304)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00012 Score=73.93 Aligned_cols=101 Identities=11% Similarity=-0.013 Sum_probs=65.3
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------cc---cCCCCCCEEEEEcCCCCCCccc---
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------FE---HRSINCPSLHIFGGDLGNDRQV--- 562 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------~~---~~~i~~PvL~i~G~~~~~D~~V--- 562 (608)
.+|+||||||.+|+.++.+ +..|+++|++|+....... .. ......|+++.+|+ .|..+
T Consensus 143 ~~i~G~S~GG~~a~~~~~~------p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~---~d~~~~~~ 213 (278)
T 2gzs_A 143 RGLWGHSYGGLFVLDSWLS------SSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGS---ATQGDNRE 213 (278)
T ss_dssp EEEEEETHHHHHHHHHHHH------CSSCSEEEEESGGGSTTHHHHHHHHHTSCTTTTTTCEEEEEECC---C-------
T ss_pred eEEEEECHHHHHHHHHHhC------ccccCeEEEeCcchhcCcchHHHHHHHhhccCCCCCcEEEEecC---cccccccc
Confidence 4799999999999999984 4579999999987543321 01 11235689999999 67653
Q ss_pred -----chHHHHHHHHHhccC--CcEEEEeCC-CCcCCCChhhHHHHHHHHH
Q 007311 563 -----ANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 563 -----p~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~ 605 (608)
+.+.++++++.+... .+++.++++ +|..... ..+....+||.
T Consensus 214 ~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~~-~~~~~~l~fl~ 263 (278)
T 2gzs_A 214 THAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFN-ASFRQALLDIS 263 (278)
T ss_dssp ----CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHH-HHHHHHHHHHT
T ss_pred chhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchhH-HHHHHHHHHHh
Confidence 467888888888753 356667776 5764222 22233444654
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0006 Score=72.41 Aligned_cols=41 Identities=17% Similarity=-0.015 Sum_probs=29.9
Q ss_pred CceEEEecChhHHHHHHHHHHHhh-----------------h---hCCCCccEEEEecCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWER-----------------L---KGEIDFRFAILCSGFA 533 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~-----------------~---~~~~~l~~vIlisG~~ 533 (608)
....|+||||||.+|..++.+... + .+...++.+|++++..
T Consensus 104 ~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 104 GRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred CceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCC
Confidence 455899999999999999974310 0 1125799999999743
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.003 Score=68.34 Aligned_cols=35 Identities=20% Similarity=-0.036 Sum_probs=28.9
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
...++|+||||++|++++.++ +..+.++|+.|+..
T Consensus 127 p~il~GhS~GG~lA~~~~~~y-----P~~v~g~i~ssapv 161 (446)
T 3n2z_B 127 PVIAIGGSYGGMLAAWFRMKY-----PHMVVGALAASAPI 161 (446)
T ss_dssp CEEEEEETHHHHHHHHHHHHC-----TTTCSEEEEETCCT
T ss_pred CEEEEEeCHHHHHHHHHHHhh-----hccccEEEEeccch
Confidence 347999999999999999954 56799999887654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00066 Score=59.78 Aligned_cols=37 Identities=11% Similarity=-0.039 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHH
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~ 513 (608)
+++..+.+.++++..+ ....|+|||+||.+|+.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 100 (131)
T 2dst_A 63 PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEAL 100 (131)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhc
Confidence 4555666666666544 445899999999999999984
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0017 Score=69.89 Aligned_cols=41 Identities=7% Similarity=-0.184 Sum_probs=30.2
Q ss_pred CceEEEecChhHHHHHHHHHHHhhh---------------------hCCCCccEEEEecCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERL---------------------KGEIDFRFAILCSGFA 533 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~---------------------~~~~~l~~vIlisG~~ 533 (608)
....|+||||||.+|+.++...... ..+..+..+|++++..
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~ 212 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPH 212 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCC
Confidence 3458999999999999988753210 0245799999999753
|
| >1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0028 Score=52.71 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=49.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
.+|.+.+..+.+|||+|.|+=..+| |...+.|+.+++++|+++|+..|.++.++
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~ 70 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLKQGPRLARVE 70 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHHHCSTTCEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHhCCCCcEEE
Confidence 4789999999999999999999999 99999999999999999999888887543
|
| >2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0025 Score=54.43 Aligned_cols=54 Identities=20% Similarity=0.327 Sum_probs=50.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
.+|.+.+.++.+|||+|.|+=..+| |...+.|+.+++++|+++|+..|.++.++
T Consensus 28 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~ 82 (101)
T 2bjd_A 28 GFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVE 82 (101)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHTTCSTTCEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHhCCCccEEE
Confidence 5899999999999999999999999 99999999999999999999888887543
|
| >2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0027 Score=58.37 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=44.6
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh------------cc-ccCCCCccccCcccccCCCchHHH
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR------------IG-KFRTPSVETLDPEIRQFSDLPTWI 197 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~------------~G-h~~g~~~~~l~~~~~~~~~~~~~~ 197 (608)
.++++++..+.+.+ -..|||+|.+.|.. .+ +|.+ .++.++....-.++.+
T Consensus 29 ~~~~~d~~~L~~~G-------------i~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~----~~~iPv~~~~~~~~~~ 91 (156)
T 2f46_A 29 QLTKADAEQIAQLG-------------IKTIICNRPDREEESQPDFAQIKQWLEQAGVTG----FHHQPVTARDIQKHDV 91 (156)
T ss_dssp CCCGGGHHHHHHHT-------------CCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCE----EEECCCCTTTCCHHHH
T ss_pred CCCHHHHHHHHHCC-------------CCEEEECCCCccccCCCcHHHHHHHHHHCCCHh----heECccCCCCCCHHHH
Confidence 45778888776542 45799999887721 11 2332 2222222111111222
Q ss_pred Hhhhh--hcCCCeEEEEcCCCccHHHHHHHHH
Q 007311 198 DNNAE--QLQGKHVLMYCTGGIRCEMASAYVR 227 (608)
Q Consensus 198 ~~~~~--~~k~k~Iv~yCtgGiR~~~a~~~L~ 227 (608)
.+..+ ..++++|++||++|.|+..+.+.++
T Consensus 92 ~~~~~~l~~~~~pVlvHC~sG~Rs~~l~al~l 123 (156)
T 2f46_A 92 ETFRQLIGQAEYPVLAYCRTGTRCSLLWGFRR 123 (156)
T ss_dssp HHHHHHHHTSCSSEEEECSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECCCCCCHHHHHHHHH
Confidence 22111 1358899999999999886655533
|
| >2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0042 Score=51.98 Aligned_cols=53 Identities=26% Similarity=0.352 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
.+|.+.+.++.+|||+|.|+=..+| |...+.|+.+++++|+++|+..|..+.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~~~p~a~V 69 (91)
T 2fhm_A 16 GFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFVEAVKNGSPFSKV 69 (91)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHTTCSSSEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHhCCCccEE
Confidence 4789999999999999999999999 9999999999999999999998766644
|
| >1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0031 Score=52.74 Aligned_cols=53 Identities=21% Similarity=0.254 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
.+|.+.+.++.+|||+|.|+=..+| |...+.|+.+++++|+++|+..|.++.+
T Consensus 18 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gP~~a~V 71 (91)
T 1w2i_A 18 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQGPPLARV 71 (91)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTTTCSTTCEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHHHhCCCCcEE
Confidence 4789999999999999999999999 9999999999999999999987877754
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.02 Score=60.02 Aligned_cols=121 Identities=16% Similarity=0.086 Sum_probs=70.4
Q ss_pred cHHHHHHHHHHHH--hHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC----CCCCc-------------
Q 007311 476 GLDVSLAYLKTIF--SQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG----FALHS------------- 536 (608)
Q Consensus 476 ~l~~s~~~L~~~i--~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG----~~~~~------------- 536 (608)
++..++++|...- ..+..+++|+|+|+||..|+.+++. ..+++.+|...+ .....
T Consensus 166 g~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~------D~Ri~~~v~~~~g~~G~~~~R~~~~~~~~Ge~v~ 239 (375)
T 3pic_A 166 GVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAF------EKRIVLTLPQESGAGGSACWRISDYLKSQGANIQ 239 (375)
T ss_dssp HHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHH------CTTEEEEEEESCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhc------CCceEEEEeccCCCCchhhhhhhhhhcccCcccc
Confidence 3445556655432 2223456899999999999999985 346888877542 11110
Q ss_pred ------cc-----------------------c-ccCCCCCCEEEEEcCCCCCCcccchHHH-------HHHHHHhccCCc
Q 007311 537 ------AE-----------------------F-EHRSINCPSLHIFGGDLGNDRQVANQAS-------KELAKAFEEGCS 579 (608)
Q Consensus 537 ------~~-----------------------~-~~~~i~~PvL~i~G~~~~~D~~Vp~~~~-------~~l~~~~~~~~~ 579 (608)
.+ + ......-|+|++-|+ |...+++.. +.+++.+.....
T Consensus 240 ~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g~----D~w~~~~g~~~~~~~a~~VY~~lG~~d~ 315 (375)
T 3pic_A 240 TASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDNN----IDWLGPQSCFGCMTAAHMAWQALGVSDH 315 (375)
T ss_dssp CHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECCC----CGGGCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred ccccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecCC----CcccCcHHHHHHHHHHHHHHHHcCCccc
Confidence 00 0 011335678888774 666665533 334555543222
Q ss_pred EEEEeCCCCc---CCCChhhHHHHHHHHHHhC
Q 007311 580 VIIEHDCGHI---IPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 580 ~vv~~~gGH~---ip~~~~~~~~i~~Fl~~~L 608 (608)
.-+...+||. +|. +...++.+||.++|
T Consensus 316 ~~~~~~ggH~Hc~fp~--~~~~~~~~F~~k~L 345 (375)
T 3pic_A 316 MGYSQIGAHAHCAFPS--NQQSQLTAFVQKFL 345 (375)
T ss_dssp EEEECCSCCSTTCCCG--GGHHHHHHHHHHHT
T ss_pred eEEEeeCCCccccCCH--HHHHHHHHHHHHHh
Confidence 3233456663 444 55789999999987
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0007 Score=87.50 Aligned_cols=61 Identities=8% Similarity=0.042 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchH--HHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQ--ASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~--~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
.+..|++++.|+ .|..+... ....|.+.... ...++..+|+|+.....+.++.+.+.|.+.
T Consensus 2439 ~l~~pI~lf~a~---~d~~~~~~~~~~~~W~~~t~g-~~~v~~v~G~H~~ml~~~~v~~la~~L~~~ 2501 (2512)
T 2vz8_A 2439 TYHGNVTLLRAK---TGGAYGEDLGADYNLSQVCDG-KVSVHVIEGDHRTLLEGSGLESILSIIHSC 2501 (2512)
T ss_dssp -------------------------------------------------------------------
T ss_pred CccCCEEEEEec---CCCcccccccccccHHHhcCC-CcEEEEECCCchHhhCCccHHHHHHHHHHH
Confidence 467899999998 66654332 12234444443 367788889999766666666666665543
|
| >2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0035 Score=52.52 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHH-HhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAV-KSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~-~~~~~f~~~~ 80 (608)
.+|.+.+.++.+|||+|.|+=..+| |...+.|+.+++++|+++| +..|.++.++
T Consensus 18 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~ 73 (92)
T 2gv1_A 18 GFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVE 73 (92)
T ss_dssp TCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHHHHTSSTTSEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHhhccCCCceEEE
Confidence 3677889999999999999999999 9999999999999999999 8888777543
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.011 Score=64.87 Aligned_cols=57 Identities=28% Similarity=0.169 Sum_probs=43.0
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...++++|.+.+...+ ..+.|+|+|.||.+++.++.... ....++++|+.||...
T Consensus 165 ~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 165 LDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE---ASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhccc---ccchhheeeeccCCcc
Confidence 456677888888876643 34579999999999988877432 2456999999999764
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.047 Score=57.96 Aligned_cols=49 Identities=18% Similarity=0.070 Sum_probs=35.4
Q ss_pred cHHHHHHHHHH----HHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 476 GLDVSLAYLKT----IFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 476 ~l~~s~~~L~~----~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
++..++++|.. .-..+..+++|+|+|.||..|+.+++. ..+++.+|...
T Consensus 198 g~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~------D~Ri~~vi~~~ 250 (433)
T 4g4g_A 198 GVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGAL------VDRIALTIPQE 250 (433)
T ss_dssp HHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHH------CTTCSEEEEES
T ss_pred hHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhc------CCceEEEEEec
Confidence 44556677766 323344567899999999999999985 34688888764
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0081 Score=65.72 Aligned_cols=57 Identities=23% Similarity=0.159 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...++++|.+.+...+ ..+.|+|+|+||.+++.++.... ....++++|+.||..+
T Consensus 160 ~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 219 (489)
T 1qe3_A 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA---AKGLFQKAIMESGASR 219 (489)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGG---GTTSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCcc---ccchHHHHHHhCCCCC
Confidence 456677888888876632 35579999999999988776321 2456899999999763
|
| >2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.025 Score=49.71 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=57.6
Q ss_pred CCCceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 7 SQEQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 7 ~~~~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
+.++...+.|-=+=.+. =--+|.+.+.++.+|||+|-|+=-.+| |-..+-|+.+++++|+++|++.|.++.++
T Consensus 29 ~~~di~t~~frV~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l~~gPp~A~V~ 102 (121)
T 2lxf_A 29 SSEDVTTLCYRVTGKVQ-GVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYLHKGSPKSVVK 102 (121)
T ss_dssp CSTTEEEEEEEEEECTT-CCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHCCTTCCEE
T ss_pred CccCEEEEEEEEEEeeC-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCCCEEE
Confidence 34444444443332332 236899999999999999999999999 99999999999999999999988887654
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.029 Score=55.82 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=38.3
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHH-h--h---hhCCCCccEEEEecC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQW-E--R---LKGEIDFRFAILCSG 531 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~-~--~---~~~~~~l~~vIlisG 531 (608)
.++..++.+.|.+...+-. ...+|+||||||+++-.++... . . ......+.++|+++-
T Consensus 54 ~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGd 118 (254)
T 3hc7_A 54 EKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGN 118 (254)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeC
Confidence 4567777777766665543 4458999999999999887652 0 0 011246788888763
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.0082 Score=66.66 Aligned_cols=57 Identities=25% Similarity=0.182 Sum_probs=42.7
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
..+...++++|.+.+...+ ..+.|+|+|.||.+++.++.... ....++++|+.||..
T Consensus 174 l~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 174 LRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKA---ADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGG---GTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCch---hhhhhhheeeecCCc
Confidence 3456678888888877643 34579999999999998886421 245699999999863
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.025 Score=62.65 Aligned_cols=57 Identities=23% Similarity=0.136 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...++++|.+.|...+ ..+.|+|+|.||.+++.++.... ....++++|+.||...
T Consensus 174 ~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~---~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 174 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL---AKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhh---hhHHHHHHhhhcCCcc
Confidence 356778888888887653 45579999999999998887431 2457999999998653
|
| >1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1 | Back alignment and structure |
|---|
Probab=95.25 E-value=0.032 Score=47.57 Aligned_cols=53 Identities=11% Similarity=0.048 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHH-hCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVK-SISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~-~~~~f~~~ 79 (608)
-+|.+.+.++.+|||+|-|+=-.+| |-..+.|+.+++++|+++|+ ..|.++.+
T Consensus 25 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V 79 (102)
T 1urr_A 25 FFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENNRIPNAKV 79 (102)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHCCSTTCEE
T ss_pred ChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhcCCCccEE
Confidence 5899999999999999999999999 99999999999999999999 47777654
|
| >2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.035 Score=47.05 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=48.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHH-hCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVK-SISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~-~~~~f~~~ 79 (608)
-+|.+.+.++.+|||+|-|+=-.+| |-..+.|+.+++++|+++|+ ..|.++.+
T Consensus 22 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V 76 (99)
T 2vh7_A 22 FFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLETRGSPKSHI 76 (99)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHTCSTTCEE
T ss_pred ChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhcCCCceEE
Confidence 4899999999999999999999999 99999999999999999998 46777644
|
| >3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.027 Score=47.70 Aligned_cols=54 Identities=17% Similarity=0.125 Sum_probs=49.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+|||+|-|+=-.+| |-..+.|+.+++++|+++|+..|.++.++
T Consensus 26 GFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~ 80 (98)
T 3trg_A 26 FFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAVS 80 (98)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTTTCSTTCEEE
T ss_pred CccHHHHHHHHHcCCeEEEEECCCCEEEEEEEECHHHHHHHHHHHHhCCCCcEEE
Confidence 5899999999999999999999999 99999999999999999999878777543
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.13 Score=52.35 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=39.5
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhh---hCCCCccEEEEecC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERL---KGEIDFRFAILCSG 531 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~---~~~~~l~~vIlisG 531 (608)
.++..++.+.|.+...+-. ...+|+||||||+|+..++...... .....+.++|+++-
T Consensus 113 ~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGd 174 (302)
T 3aja_A 113 AEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIAD 174 (302)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeC
Confidence 4566777777766666543 4558999999999999887654311 11246888888773
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=94.70 E-value=0.041 Score=60.77 Aligned_cols=57 Identities=25% Similarity=0.128 Sum_probs=42.7
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
..+...+++||.+.|...+ ..+.|+|+|.||.+++.++.... ....++++|+.||..
T Consensus 170 l~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 170 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG---SRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHH---HHTTCSEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCcc---chhhhhhheeccCCc
Confidence 3456778888888887643 45579999999999988876431 134699999999964
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=94.52 E-value=0.076 Score=58.70 Aligned_cols=57 Identities=21% Similarity=0.156 Sum_probs=42.6
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
..+...++++|.+.|...+ ..+.|+|+|.||.+++.++.... ....++++|+.||..
T Consensus 173 l~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP---SRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHH---HHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcc---cHHhHhhheeccCCc
Confidence 3456778888888887643 45579999999999988776432 134689999999853
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.091 Score=57.82 Aligned_cols=60 Identities=28% Similarity=0.161 Sum_probs=42.1
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
..+...+++||.+.+...+ ..+.|+|+|.||.+++.++..... .....++++|+.||...
T Consensus 164 l~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~-~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGG-KDEGLFIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGT-CCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCc-cccccchhhhhcCCCcC
Confidence 3466778888888887643 455799999999877766543210 11456899999998753
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=94.46 E-value=0.058 Score=59.44 Aligned_cols=56 Identities=23% Similarity=0.134 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+...+++||.+.|...+ ..+.|+|+|.||.+++.++.... ....++++|+.||..
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG---SHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCcc---chHHHHHHHHhcCcc
Confidence 456778888888887653 35579999999999998887431 134689999999964
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=93.87 E-value=0.52 Score=44.91 Aligned_cols=58 Identities=16% Similarity=0.071 Sum_probs=40.0
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.++..++.+.|.+...+-. ...+|+||||||+|+-.++..... .....+.++|+++-.
T Consensus 77 ~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 77 SAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDS-AIRDKIAGTVLFGYT 135 (197)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCH-HHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCH-hHHhheEEEEEeeCC
Confidence 4567777777777766644 455799999999999887754321 112468888888743
|
| >1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1 | Back alignment and structure |
|---|
Probab=93.60 E-value=0.037 Score=46.81 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=48.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh-CCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS-ISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~-~~~f~~~~ 80 (608)
-+|.+.+.++.+|||+|-|+=-.+| |-..+-|+.+++++|+++|+. .|.++.++
T Consensus 21 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~ 76 (98)
T 1aps_A 21 CFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWLSKVGSPSSRID 76 (98)
T ss_dssp CCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSSSSCCCSSSCCC
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHhhcCCCceEEE
Confidence 3678889999999999999999999 999999999999999999984 77776543
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=93.55 E-value=0.28 Score=54.04 Aligned_cols=60 Identities=20% Similarity=0.161 Sum_probs=42.1
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhh---hCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERL---KGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~---~~~~~l~~vIlisG~~ 533 (608)
..+...+++||.+.|...+ ..+.|+|+|.||.+++.++...... .....++++|+.||..
T Consensus 179 l~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 179 LKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 4567788888888887653 4557999999998877766532100 1245689999999853
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=93.16 E-value=0.31 Score=46.60 Aligned_cols=58 Identities=12% Similarity=0.027 Sum_probs=38.7
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.++..++.+.|.+...+-. ...+|+||||||+|+-.++..... .....+.++|+++-.
T Consensus 85 ~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 85 SAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLST-TIKNQIKGVVLFGYT 143 (201)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCH-HHHHHEEEEEEETCT
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCCh-hhhhheEEEEEeeCc
Confidence 4577777787777776644 455799999999999876642210 001357788887743
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=93.13 E-value=0.16 Score=56.71 Aligned_cols=56 Identities=14% Similarity=0.079 Sum_probs=41.8
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+...+++||.+.|...+ ..+.|+|+|.||.+++.++... .....++.+|+.||..
T Consensus 209 ~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~---~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 209 WDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP---VTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT---TTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCC---cccchhHhhhhhcccc
Confidence 456778888888776643 3557999999999988877632 2245689999999864
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=92.27 E-value=0.51 Score=52.08 Aligned_cols=60 Identities=25% Similarity=0.200 Sum_probs=42.5
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhh---hhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWER---LKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~---~~~~~~l~~vIlisG~~ 533 (608)
..+...+++||.+.|...+ ..+.|+|+|.||.+++.++..... ......++++|+.||..
T Consensus 187 l~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 187 LHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 3456778888888877643 455799999999998887764210 01234689999999853
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=90.87 E-value=0.4 Score=47.79 Aligned_cols=20 Identities=25% Similarity=0.235 Sum_probs=18.0
Q ss_pred eEEEecChhHHHHHHHHHHH
Q 007311 495 DGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~ 514 (608)
..|.||||||++|..++...
T Consensus 138 i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 138 VAVTGHSLGGATALLCALDL 157 (269)
T ss_pred EEEEeeCHHHHHHHHHHHHH
Confidence 47999999999999999876
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=90.77 E-value=2.2 Score=40.12 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=34.0
Q ss_pred cHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 476 GLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
+.+++.+.+.....+-. ...+|+||||||.|+-.++..... .-...+.++++++-.
T Consensus 75 g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 75 AIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSA-DVQDKIKGVVLFGYT 131 (187)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCH-HHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCH-hhhhhEEEEEEeeCC
Confidence 34555555555555443 455799999999999876642210 001357788887743
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=90.08 E-value=0.65 Score=46.10 Aligned_cols=48 Identities=27% Similarity=0.097 Sum_probs=30.5
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
+.|.+++++.. ....|.|||+||++|+.+++.... ...++. ++.+++.
T Consensus 113 ~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~--~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 113 SLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSA--TYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHT--TCSSEE-EEEESCC
T ss_pred HHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhc--cCCCeE-EEEecCC
Confidence 34444444443 345689999999999999987652 234554 5555543
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=89.97 E-value=0.61 Score=46.46 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=23.2
Q ss_pred HHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 483 YLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 483 ~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.+.++.++.. ....|.||||||++|+.++....
T Consensus 127 ~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 127 KVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCceEEEecCChHHHHHHHHHHHHH
Confidence 3444443333 24578999999999999998764
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=89.77 E-value=0.27 Score=47.23 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=38.3
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhh-hCCCCccEEEEecC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERL-KGEIDFRFAILCSG 531 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~-~~~~~l~~vIlisG 531 (608)
.++..++.+.|.....+-. ...+|+||||||+|+-.++...... .....+.++|+++-
T Consensus 57 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 57 AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGN 116 (205)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeC
Confidence 3566777777766655543 4557999999999999877644100 01235888888883
|
| >1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A | Back alignment and structure |
|---|
Probab=89.76 E-value=0.48 Score=39.29 Aligned_cols=50 Identities=20% Similarity=0.154 Sum_probs=44.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHh-CCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKS-ISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~-~~~f~~~ 79 (608)
-+|.+.+.++.+|||+|-|+=-.+||-..+-|+. ++|+++|+. .|.++.+
T Consensus 21 GFR~~v~~~A~~lgL~G~VrN~~dGVei~~eG~~---~~f~~~l~~~~P~~A~V 71 (91)
T 1gxu_A 21 GFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---EVFLVQLYQHCPPLARI 71 (91)
T ss_dssp SHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCC---HHHHHHHHHTCCTTCEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCcEEEEEEECH---HHHHHHHhhCCCCCEEE
Confidence 4799999999999999999999999888888887 899999987 5767644
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=89.15 E-value=0.4 Score=53.28 Aligned_cols=56 Identities=20% Similarity=0.063 Sum_probs=41.5
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCC-CCccEEEEecCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGE-IDFRFAILCSGF 532 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~-~~l~~vIlisG~ 532 (608)
..+...+++||.+.|...+ ..+.|+|.|-||.+++.++.... .. ..++.+|+.||.
T Consensus 189 l~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~---~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 189 LLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHY---SEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTT---SCTTSCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCC---cchhHHHHHHHhcCC
Confidence 3456778888888887643 34579999999999988876332 12 458899999975
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=89.01 E-value=1.8 Score=42.81 Aligned_cols=62 Identities=16% Similarity=0.051 Sum_probs=43.3
Q ss_pred cHHHHHHHHHHHHhHh---C-CceEEEecChhHHHHHHHHHHHhhh-hCCCCccEEEEecCCCCCcc
Q 007311 476 GLDVSLAYLKTIFSQE---G-PFDGILGFSQGAAMAASVCAQWERL-KGEIDFRFAILCSGFALHSA 537 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~---~-~~~~IlGFSQGa~vAl~la~~~~~~-~~~~~l~~vIlisG~~~~~~ 537 (608)
...+.++.|..++.+. . ....|.|.|-||..+-.+|....+. .....++++++.+|+..+..
T Consensus 124 ~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~~~ 190 (255)
T 1whs_A 124 TAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYH 190 (255)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCHHH
Confidence 3455556666666643 2 2347999999999999988766532 22478999999999886543
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=88.62 E-value=2.6 Score=45.28 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 477 LDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 477 l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
..+.+..|.+++... .....|.|.|-||..+-.+|....+ .....++++++.+|+..+.
T Consensus 122 a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~-~~~~~l~g~~ign~~~d~~ 184 (452)
T 1ivy_A 122 AQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ-DPSMNLQGLAVGNGLSSYE 184 (452)
T ss_dssp HHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTT-CTTSCEEEEEEESCCSBHH
T ss_pred HHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHh-cCccccceEEecCCccChh
Confidence 344556677777652 2334799999999988888776542 2357899999999987543
|
| >4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A | Back alignment and structure |
|---|
Probab=87.14 E-value=0.98 Score=40.06 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=19.2
Q ss_pred cCCCeEEEEcCCCc-cHH-HHHHHHHh
Q 007311 204 LQGKHVLMYCTGGI-RCE-MASAYVRS 228 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~-~a~~~L~~ 228 (608)
.++.+|+++|+.|+ |+. .++.+|..
T Consensus 86 ~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 86 ARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 36789999999998 887 55665554
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=86.83 E-value=1.3 Score=43.83 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=24.1
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhh
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
+.|.+.+.+.. ....|.|||+||++|+.+++....
T Consensus 112 ~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~ 147 (258)
T 3g7n_A 112 TEVKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQ 147 (258)
T ss_dssp HHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHHHHH
Confidence 33444444443 344689999999999999887643
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=86.78 E-value=0.76 Score=45.80 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=24.0
Q ss_pred HHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHH
Q 007311 481 LAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 481 ~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+.|.+++.+.. ....|.|||+||++|+.+++..
T Consensus 124 ~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 124 FPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 344444444443 3457899999999999999876
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=86.41 E-value=0.8 Score=45.89 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=24.5
Q ss_pred HHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 481 LAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 481 ~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.+.|.+++.+.. ....|.|||+||++|+.++....
T Consensus 124 ~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 124 IKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 334444444443 24478999999999999998765
|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* | Back alignment and structure |
|---|
Probab=86.30 E-value=0.48 Score=42.52 Aligned_cols=25 Identities=28% Similarity=0.501 Sum_probs=19.4
Q ss_pred cCCCeEEEEcCCCc-cHHHH-HHHHHh
Q 007311 204 LQGKHVLMYCTGGI-RCEMA-SAYVRS 228 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~a-~~~L~~ 228 (608)
.++++|+++|+.|+ |+... ++||..
T Consensus 87 ~~~~~vlVHC~~G~~Rsg~~~~a~l~~ 113 (157)
T 3rgo_A 87 ALGQCVYVHCKAGRSRSATMVAAYLIQ 113 (157)
T ss_dssp HTTCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HCCCEEEEECCCCCChHHHHHHHHHHH
Confidence 35789999999998 88865 566654
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=86.04 E-value=0.72 Score=44.21 Aligned_cols=39 Identities=18% Similarity=0.271 Sum_probs=28.1
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~ 512 (608)
.++..++.+.|.+...+-. ...+|+||||||+|+..++.
T Consensus 62 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 62 VNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHh
Confidence 3566666666666655543 44579999999999988764
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=85.73 E-value=0.78 Score=43.97 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=27.7
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~ 512 (608)
.++..++.+.|.+...+-. ...+|+||||||+|+..++.
T Consensus 62 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 62 AQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHh
Confidence 3466666666666555543 44579999999999988764
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=83.86 E-value=0.84 Score=41.51 Aligned_cols=59 Identities=22% Similarity=0.271 Sum_probs=42.7
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc-----------------------CCcEEEEeCCCCcCCCChh--hHH
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEE-----------------------GCSVIIEHDCGHIIPTRSP--YID 598 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~-----------------------~~~~vv~~~gGH~ip~~~~--~~~ 598 (608)
..+++|+..|. .|-+++.-..+++.+.+.= .-..+.+.++||++|.+.| -.+
T Consensus 63 ~girvlIy~Gd---~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~ 139 (153)
T 1whs_B 63 AGLRIWVFSGD---TDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALV 139 (153)
T ss_dssp TTCEEEEEEET---TCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHH
T ss_pred cCceEEEEecC---cCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHH
Confidence 36899999999 8999999988988887751 1123345678999998655 235
Q ss_pred HHHHHHH
Q 007311 599 EIKSFLQ 605 (608)
Q Consensus 599 ~i~~Fl~ 605 (608)
-+.+||.
T Consensus 140 m~~~fl~ 146 (153)
T 1whs_B 140 LFQYFLQ 146 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 5556654
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=83.63 E-value=1.3 Score=44.97 Aligned_cols=35 Identities=20% Similarity=0.109 Sum_probs=24.7
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhh
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
+.|.+.+.+.. ....|.|||+||++|..+++....
T Consensus 142 ~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~ 177 (301)
T 3o0d_A 142 PKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKV 177 (301)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCceEEEeccChHHHHHHHHHHHHHh
Confidence 34445554443 344689999999999999987653
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=83.51 E-value=2.5 Score=42.38 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=23.7
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.|.+.+.+.. ....|.|||+||++|+.+++...
T Consensus 126 ~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~ 160 (279)
T 3uue_A 126 TAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIE 160 (279)
T ss_dssp HHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHH
Confidence 33444444433 34578999999999999988654
|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.45 E-value=1.3 Score=39.15 Aligned_cols=24 Identities=25% Similarity=0.423 Sum_probs=17.4
Q ss_pred CCCeEEEEcCCCc-cHHHHH-HHHHh
Q 007311 205 QGKHVLMYCTGGI-RCEMAS-AYVRS 228 (608)
Q Consensus 205 k~k~Iv~yCtgGi-R~~~a~-~~L~~ 228 (608)
++.+|+++|+.|+ |+...+ .+|..
T Consensus 88 ~~~~vlVHC~aG~~Rsg~~~~~~l~~ 113 (151)
T 2img_A 88 RGEAVGVHCALGFGRTGTMLACYLVK 113 (151)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHH
Confidence 5789999999886 866544 44443
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=83.24 E-value=2.1 Score=43.78 Aligned_cols=34 Identities=21% Similarity=0.038 Sum_probs=23.6
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
..|.+.+.+.. ....|.|||+||++|+.+++...
T Consensus 124 ~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~l~ 158 (319)
T 3ngm_A 124 AAVAKARKANPSFKVVSVGHSLGGAVATLAGANLR 158 (319)
T ss_dssp HHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCceEEeecCHHHHHHHHHHHHHH
Confidence 34444444333 34468999999999999988764
|
| >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A | Back alignment and structure |
|---|
Probab=80.15 E-value=3 Score=37.02 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=20.7
Q ss_pred CCCeEEEEcCCCc-cHHHHHHHHHhcCCCC
Q 007311 205 QGKHVLMYCTGGI-RCEMASAYVRSKGAGF 233 (608)
Q Consensus 205 k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf 233 (608)
++.+|+++|+.|+ |+..+++++... .|.
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~-~g~ 119 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKL-QKW 119 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHH-TTB
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH-hCC
Confidence 5789999999997 988766655443 354
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 608 | ||||
| d1gmxa_ | 108 | c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia | 6e-10 | |
| d1ymka1 | 174 | c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) | 2e-06 | |
| d1qxna_ | 137 | c.46.1.3 (A:) Polysulfide-sulfur transferase (sulf | 5e-06 | |
| d1c25a_ | 161 | c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: | 9e-06 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 8e-05 | |
| d1hzma_ | 154 | c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat | 3e-04 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 4e-04 | |
| d1yt8a1 | 136 | c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase | 0.002 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 0.002 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 0.002 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 0.003 | |
| d1yt8a2 | 101 | c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase P | 0.004 |
| >d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Single-domain sulfurtransferase domain: Sulfurtransferase GlpE species: Escherichia coli [TaxId: 562]
Score = 54.7 bits (131), Expect = 6e-10
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 25/122 (20%)
Query: 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ 189
++ + H LQ +K+ VL+D R+ +G
Sbjct: 5 ECINVADAHQKLQ-------------EKEAVLVDIRDPQSFAMGHA----------VQAF 41
Query: 190 FSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249
T + V++ C G + A+ Y+ G++ V+ + GG + + Q
Sbjct: 42 HLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQ--QGYDVVYSIDGGFEAWQRQ 99
Query: 250 FP 251
FP
Sbjct: 100 FP 101
|
| >d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: CDC25b species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 2e-06
Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 11/116 (9%)
Query: 146 QVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQ 205
+L + + K V++D R YE G + L E S L +
Sbjct: 32 ALLTGKFSNIVDKFVIVDCRYPYEYEGGHI--KTAVNLPLERDAESFLLKSPIAPCSLDK 89
Query: 206 GKHVLMYCT-GGIRCEMASAYVRS--------KGAGFENVFQLYGGIQRYLEQFPD 252
++ +C R ++R + ++ L GG + + Q P+
Sbjct: 90 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 145
|
| >d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Single-domain sulfurtransferase domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) species: Wolinella succinogenes [TaxId: 844]
Score = 44.1 bits (103), Expect = 5e-06
Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ 189
LS + + +LQ ++ + L+D R+ E + +
Sbjct: 23 VMLSPKDAYKLLQ------------ENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKL 70
Query: 190 FSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249
L + K V+++C R +A +R G F+ ++ GG+ ++LE+
Sbjct: 71 EPLLAKSGLD-----PEKPVVVFCKTAARAALAGKTLREYG--FKTIYNSEGGMDKWLEE 123
|
| >d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: CDC25a species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 9e-06
Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 12/116 (10%)
Query: 146 QVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQ 205
VL+ + A K+ V++D R YE G + + D +
Sbjct: 32 SVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGA---VNLHMEEEVEDFLLKKPIVPTDGK 88
Query: 206 GKHVLMYC-TGGIRCEMASAYVRSKGA--------GFENVFQLYGGIQRYLEQFPD 252
V+ +C R YVR + + ++ L GG + + +
Sbjct: 89 RVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 42.6 bits (98), Expect = 8e-05
Identities = 33/253 (13%), Positives = 70/253 (27%), Gaps = 24/253 (9%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKK------------------LKNIAEFVFIDAPHELPF 416
+L HG+ +A ++ + L+ + F D +L
Sbjct: 22 VLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIE 81
Query: 417 IYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDG 476
V+ V + R P P
Sbjct: 82 HLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFA 141
Query: 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI-LCSGFALH 535
+ G ++G ++ V Q ++ + + + FA
Sbjct: 142 RFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAET 201
Query: 536 SAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP 595
+ I+ P+L I G D+ V + + ++A +G + + D H
Sbjct: 202 DFRPDMAKIDVPTLVIHGDG---DQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHA 258
Query: 596 --YIDEIKSFLQR 606
+++ +FL+R
Sbjct: 259 QQLNEDLLAFLKR 271
|
| >d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: Erk2 binding domain of Mapk phosphatase mkp-3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 3e-04
Identities = 15/141 (10%), Positives = 40/141 (28%), Gaps = 19/141 (13%)
Query: 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ 189
R + +I ++ L+++ +++L+L+D R + + + +
Sbjct: 6 RPVPFASEMAISKTVAW-LNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLR 64
Query: 190 FS-----------DLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASA-------YVRSKGA 231
D + V++Y + ++
Sbjct: 65 RLQKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKD 124
Query: 232 GFENVFQLYGGIQRYLEQFPD 252
F L GG ++ +F
Sbjct: 125 EGCRAFYLEGGFSKFQAEFSL 145
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 40.2 bits (92), Expect = 4e-04
Identities = 29/248 (11%), Positives = 62/248 (25%), Gaps = 24/248 (9%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP----HELPFIYQTSNVSSVIQNG 430
++ LHG+ NA ++ L+ +D P ++++ +
Sbjct: 14 LVLLHGWGLNAEVWRCIDEELSSHFTLHL----VDLPGFGRSRGFGALSLADMAEAVLQQ 69
Query: 431 PPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ 490
P + VA + + + + + + L Q
Sbjct: 70 APDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQ 129
Query: 491 EGPF----------DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFE 540
+G A ++ L
Sbjct: 130 LSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQP 189
Query: 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YID 598
++++ P L ++G D V + L K + S I H P +
Sbjct: 190 LQNVSMPFLRLYG---YLDGLVPRKVVPMLDKLWPHSESYIFA-KAAHAPFISHPAEFCH 245
Query: 599 EIKSFLQR 606
+ + QR
Sbjct: 246 LLVALKQR 253
|
| >d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Thiosulfate sulfurtransferase PA2603 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.8 bits (84), Expect = 0.002
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 21/114 (18%)
Query: 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF 190
L+A E ++L + V+LDAR E + + +
Sbjct: 25 SLAAEEVQALLD------------ARAEAVILDARRFDEYQTMSIPGGISVPGAELVLRV 72
Query: 191 SDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQ 244
++L V++ C G R + + + + G V L G
Sbjct: 73 AELAPDPRT--------RVIVNCAGRTRSIIGTQSLLNAG-IPNPVAALRNGTI 117
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 38.3 bits (87), Expect = 0.002
Identities = 24/255 (9%), Positives = 60/255 (23%), Gaps = 26/255 (10%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKK--------LKNIAEFVFIDAPHELPFIYQTSNVSSV 426
++ +HGF + S++ ++A+L + + ++ N
Sbjct: 26 VVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLE 85
Query: 427 IQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLAD-GPFDPHQYQQQTDGLDVSLAYLK 485
+ S K+A +P + + +
Sbjct: 86 TLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFF 145
Query: 486 TIFSQEGPFDGILGFSQ------------GAAMAASVCAQWERLKGEIDFRFAILCSGFA 533
D ++ G ++ F A
Sbjct: 146 DGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW 205
Query: 534 LHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593
+ I+ P+L + G DR + + + + + H +
Sbjct: 206 YTDFRADIPRIDVPALILHGTG---DRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWT 262
Query: 594 SP--YIDEIKSFLQR 606
+ +FL +
Sbjct: 263 HAEEVNTALLAFLAK 277
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 38.0 bits (86), Expect = 0.002
Identities = 25/257 (9%), Positives = 64/257 (24%), Gaps = 28/257 (10%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKK--------LKNIAEFVFIDAPHELPFIYQTSNVSSV 426
++ +HG+ + S++ +T L + + ++ ++ +
Sbjct: 26 VVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLE 85
Query: 427 IQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLA--------DGPFDPHQYQQQTDGLD 478
+ E KLA D + + D
Sbjct: 86 TLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFD 145
Query: 479 VSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE 538
A K ++ + + + Q + A + + + +
Sbjct: 146 GIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWI 205
Query: 539 FE-------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIP 591
+ R+ P+L + G D + A+ + H +
Sbjct: 206 EDFRSDVEAVRAAGKPTLILHGTK---DNILPIDATARRFHQAVPEADYVEVEGAPHGLL 262
Query: 592 TRSP--YIDEIKSFLQR 606
+K+FL +
Sbjct: 263 WTHADEVNAALKTFLAK 279
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 37.6 bits (85), Expect = 0.003
Identities = 31/254 (12%), Positives = 72/254 (28%), Gaps = 26/254 (10%)
Query: 375 ILCLHGFRQNASSFKGRTASLAKK-----------LKNIAEFVFIDAPHELPFIYQTSNV 423
++ HG+ +A + + +
Sbjct: 24 VVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTE 83
Query: 424 SSVIQNGPPPPSENCKKRFAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSL-- 481
+ ++ A +VA G+ ++ P + DGL + +
Sbjct: 84 ALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFD 143
Query: 482 ------AYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL--CSGFA 533
A + F + P GF++ A + L+G + A + F+
Sbjct: 144 EFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFS 203
Query: 534 LHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593
+ + I+ P L G D D+ V + + ++ H + +
Sbjct: 204 ETDFTDDLKRIDVPVLVAHGTD---DQVVPYADAAPKSAELLANATLKSYEGLPHGMLST 260
Query: 594 SP--YIDEIKSFLQ 605
P ++ +F++
Sbjct: 261 HPEVLNPDLLAFVK 274
|
| >d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 101 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Thiosulfate sulfurtransferase PA2603 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 35.0 bits (79), Expect = 0.004
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 13/105 (12%)
Query: 150 KENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209
+ ++L LLD R + L + D +
Sbjct: 10 RAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRD--------TPI 61
Query: 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPDGG 254
+Y G +A+ + G + +V L GG+ + GG
Sbjct: 62 TVYDDGEGLAPVAAQRLHDLG--YSDVALLDGGLSGWRNA---GG 101
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 608 | |||
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.88 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.87 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.81 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.81 | |
| d1gmxa_ | 108 | Sulfurtransferase GlpE {Escherichia coli [TaxId: 5 | 99.77 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.77 | |
| d1yt8a1 | 136 | Thiosulfate sulfurtransferase PA2603 {Pseudomonas | 99.74 | |
| d1qxna_ | 137 | Polysulfide-sulfur transferase (sulfide dehydrogen | 99.72 | |
| d1yt8a2 | 101 | Thiosulfate sulfurtransferase PA2603 {Pseudomonas | 99.71 | |
| d1yt8a4 | 130 | Thiosulfate sulfurtransferase PA2603 {Pseudomonas | 99.68 | |
| d1tq1a_ | 119 | Thiosulfate sulfurtransferase/Senescence-associate | 99.67 | |
| d1yt8a3 | 157 | Thiosulfate sulfurtransferase PA2603 {Pseudomonas | 99.62 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.6 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.6 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.6 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.6 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.58 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.58 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.58 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.57 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.56 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.55 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.55 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.55 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.55 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.55 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.55 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.54 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.54 | |
| d1c25a_ | 161 | CDC25a {Human (Homo sapiens) [TaxId: 9606]} | 99.54 | |
| d1ymka1 | 174 | CDC25b {Human (Homo sapiens) [TaxId: 9606]} | 99.53 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.52 | |
| d1t3ka_ | 132 | Dual specificity phosphatase Cdc25 {Thale cress (A | 99.52 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.52 | |
| d1e0ca2 | 136 | Sulfurtransferase {Azotobacter vinelandii [TaxId: | 99.5 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.5 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.5 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.5 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.5 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.49 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.47 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.47 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.46 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.46 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.45 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.44 | |
| d1e0ca1 | 135 | Sulfurtransferase {Azotobacter vinelandii [TaxId: | 99.43 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.42 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.42 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.4 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.39 | |
| d1rhsa2 | 144 | Rhodanese {Cow (Bos taurus) [TaxId: 9913]} | 99.33 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.31 | |
| d1urha2 | 120 | 3-mercaptopyruvate sulfurtransferase {Escherichia | 99.3 | |
| d1uara1 | 143 | Sulfurtransferase {Thermus thermophilus [TaxId: 27 | 99.3 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.27 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.25 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.25 | |
| d1urha1 | 147 | 3-mercaptopyruvate sulfurtransferase {Escherichia | 99.24 | |
| d1rhsa1 | 149 | Rhodanese {Cow (Bos taurus) [TaxId: 9913]} | 99.22 | |
| d1uara2 | 141 | Sulfurtransferase {Thermus thermophilus [TaxId: 27 | 99.22 | |
| d2gwfa1 | 135 | Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum | 99.22 | |
| d1hzma_ | 154 | Erk2 binding domain of Mapk phosphatase mkp-3 {Hum | 99.18 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.17 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.15 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.15 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.14 | |
| d1okga2 | 139 | 3-mercaptopyruvate sulfurtransferase {Leishmania m | 99.06 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.04 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.01 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 98.91 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 98.9 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 98.87 | |
| d1okga1 | 156 | 3-mercaptopyruvate sulfurtransferase {Leishmania m | 98.86 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 98.71 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.68 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.67 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.61 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 98.58 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 98.57 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.57 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 98.53 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 98.52 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.52 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.51 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.48 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.43 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.28 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.2 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 98.17 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 98.07 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.06 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.04 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 97.95 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 97.86 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 97.83 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 97.77 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 97.77 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 97.74 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 97.65 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 97.61 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 96.47 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 96.34 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 96.15 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 96.05 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.81 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 94.74 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 94.28 | |
| d1ulra_ | 87 | Acylphosphatase {Thermus thermophilus [TaxId: 274] | 94.26 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 94.26 | |
| d1w2ia_ | 90 | Acylphosphatase {Pyrococcus horikoshii [TaxId: 539 | 94.19 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 93.9 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 93.44 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 93.29 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 92.9 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 92.84 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 92.51 | |
| d2acya_ | 98 | Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]} | 92.33 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 92.25 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 92.06 | |
| d1urra_ | 97 | Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila | 92.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 91.71 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 90.86 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 88.85 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 88.54 | |
| d1apsa_ | 98 | Acylphosphatase {Horse (Equus caballus) [TaxId: 97 | 88.51 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 88.42 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 87.51 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 87.35 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 87.27 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 86.92 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 85.56 | |
| d1xria_ | 151 | Putative phosphatase At1g05000 {Thale cress (Arabi | 84.95 | |
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 83.71 |
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=7.3e-22 Score=193.74 Aligned_cols=192 Identities=15% Similarity=0.171 Sum_probs=139.4
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+++++||+|||+|+|++.|. .+...+. +++.+|+++||....... .....++||+.
T Consensus 18 ~~~~~~VI~lHG~G~~~~~~~----~~~~~l~~~~~~~v~p~Ap~~~~~~~------------------~~~~~~~w~~~ 75 (229)
T d1fj2a_ 18 RKATAAVIFLHGLGDTGHGWA----EAFAGIRSSHIKYICPHAPVRPVTLN------------------MNVAMPSWFDI 75 (229)
T ss_dssp SCCSEEEEEECCSSSCHHHHH----HHHHTTCCTTEEEEECCCCEEEEGGG------------------TTEEEECSSCB
T ss_pred CCCCCEEEEEcCCCCCHHHHH----HHHHHhcCCCCEEEeCCCCCCccccC------------------CCccccccccc
Confidence 355678999999999999998 5656554 689999999995432111 01235678773
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh------CCceEEEecChhHHHHHHHHHHHhhhhCCC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE------GPFDGILGFSQGAAMAASVCAQWERLKGEI 521 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~------~~~~~IlGFSQGa~vAl~la~~~~~~~~~~ 521 (608)
.... . +.....+++.++.+.|..+++.. ....+|+||||||++|+.+++ ..+.
T Consensus 76 ~~~~-------------~---~~~~~~~~i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~-----~~~~ 134 (229)
T d1fj2a_ 76 IGLS-------------P---DSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTAL-----TTQQ 134 (229)
T ss_dssp CCCS-------------T---TCCBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHT-----TCSS
T ss_pred cccc-------------c---cchhhhHHHHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHH-----hhcc
Confidence 2211 1 11123456777777777766542 234579999999999999988 4467
Q ss_pred CccEEEEecCCCCCccc-----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc----CCcEEEEeCC-CCcCC
Q 007311 522 DFRFAILCSGFALHSAE-----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE----GCSVIIEHDC-GHIIP 591 (608)
Q Consensus 522 ~l~~vIlisG~~~~~~~-----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~----~~~~vv~~~g-GH~ip 591 (608)
.++++|.+||+.|.... ......++|+|++||+ +|++||.+.++++++.++. ..+++..+++ ||.+.
T Consensus 135 ~~~gvi~~sg~lp~~~~~~~~~~~~~~~~~Pvli~hG~---~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~ 211 (229)
T d1fj2a_ 135 KLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGD---CDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC 211 (229)
T ss_dssp CCSEEEEESCCCTTGGGSCSSCCCSTTTTCCEEEEEET---TCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC
T ss_pred ccCccccccccccccccccccccccccccCceeEEEcC---CCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC
Confidence 89999999999876432 1233457999999999 8999999999998887754 2356667665 99984
Q ss_pred CChhhHHHHHHHHHHhC
Q 007311 592 TRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 592 ~~~~~~~~i~~Fl~~~L 608 (608)
+++++++.+||++.|
T Consensus 212 --~~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 212 --QQEMMDVKQFIDKLL 226 (229)
T ss_dssp --HHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHhHC
Confidence 488999999999876
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.87 E-value=3.2e-22 Score=194.44 Aligned_cols=195 Identities=19% Similarity=0.221 Sum_probs=140.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++++||+|||+|+|+..|......|.+.+ ..+.+++++||....... .....+.|++...
T Consensus 12 ~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~-~~~~~i~p~ap~~~~~~~------------------~~~~~~~w~~~~~ 72 (218)
T d1auoa_ 12 PADACVIWLHGLGADRYDFMPVAEALQESL-LTTRFVLPQAPTRPVTIN------------------GGYEMPSWYDIKA 72 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHTTC-TTEEEEECCCCEEEEGGG------------------TTEEEECSSCEEE
T ss_pred CCCeEEEEEcCCCCChhhHHHHHHHHHHhC-CCcEEEccCCCccccccC------------------CCcccCccccccc
Confidence 456789999999999999985555554433 358999999996543211 0113557876321
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh------CCceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE------GPFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~------~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
. ++ ......+++.++...+.+.++.. ....+|+||||||++|+.+++.. .+..+
T Consensus 73 ~---------------~~-~~~~~~~~~~~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~----~~~~~ 132 (218)
T d1auoa_ 73 M---------------SP-ARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFIN----WQGPL 132 (218)
T ss_dssp C---------------SS-SCEECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTT----CCSCC
T ss_pred c---------------cc-cccchHHHHHHHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhc----ccccc
Confidence 1 01 11123445667766666665532 24568999999999999987632 25679
Q ss_pred cEEEEecCCCCCcccc---ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHH
Q 007311 524 RFAILCSGFALHSAEF---EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYID 598 (608)
Q Consensus 524 ~~vIlisG~~~~~~~~---~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~ 598 (608)
+++|.++|+.+..... .....++|+|++||+ +|.+||.+.++++++.++.. ..++.++++||.++ +++++
T Consensus 133 ~~~v~~~g~~~~~~~~~~~~~~~~~~pvl~~hG~---~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~gH~i~--~~~~~ 207 (218)
T d1auoa_ 133 GGVIALSTYAPTFGDELELSASQQRIPALCLHGQ---YDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVL--PQEIH 207 (218)
T ss_dssp CEEEEESCCCTTCCTTCCCCHHHHTCCEEEEEET---TCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCC--HHHHH
T ss_pred eeeeeccccCcccccccccchhccCCCEEEEecC---CCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCccC--HHHHH
Confidence 9999999998765431 233567999999999 89999999999999999864 36778889999985 47899
Q ss_pred HHHHHHHHhC
Q 007311 599 EIKSFLQRFL 608 (608)
Q Consensus 599 ~i~~Fl~~~L 608 (608)
++.+||.++|
T Consensus 208 ~i~~wl~~~l 217 (218)
T d1auoa_ 208 DIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998865
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.81 E-value=7.7e-20 Score=174.32 Aligned_cols=185 Identities=18% Similarity=0.157 Sum_probs=132.2
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++|+||+|||+|+|+..|. .+++.+.+++.+++++++.... ....|.....
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~----~~~~~l~~~~~vv~p~~~~~~~------------------------~~~~~~~~~~ 63 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLL----PLAEIVDSEASVLSVRGNVLEN------------------------GMPRFFRRLA 63 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTH----HHHHHHHTTSCEEEECCSEEET------------------------TEEESSCEEE
T ss_pred CCCCEEEEECCCCCCHHHHH----HHHHHhccCCceeeecccccCC------------------------CCccccccCC
Confidence 55789999999999999998 7777777889999999884322 1222222000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....+..+. ....+...+.+..+.++ .....+++||||||.+++.++.. .+..++++
T Consensus 64 ------------~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~-----~~~~~~~~ 123 (202)
T d2h1ia1 64 ------------EGIFDEEDL---IFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFH-----YENALKGA 123 (202)
T ss_dssp ------------TTEECHHHH---HHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHH-----CTTSCSEE
T ss_pred ------------CCCCchHHH---HHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHh-----ccccccce
Confidence 000111111 11122222222222322 23456799999999999999984 35678999
Q ss_pred EEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 527 ILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 527 IlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
|+++|+.+............|++++||+ +|++||.+.++++++.++... .+++++++||.++ ++.++++.+||
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~i~~G~---~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ggH~~~--~~~~~~~~~wl 198 (202)
T d2h1ia1 124 VLHHPMVPRRGMQLANLAGKSVFIAAGT---NDPICSSAESEELKVLLENANANVTMHWENRGHQLT--MGEVEKAKEWY 198 (202)
T ss_dssp EEESCCCSCSSCCCCCCTTCEEEEEEES---SCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCC--HHHHHHHHHHH
T ss_pred eeecCCCCcccccccccccchhhccccc---CCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCcCC--HHHHHHHHHHH
Confidence 9999998876655566788999999999 899999999999999998643 5678889999984 47899999999
Q ss_pred HHh
Q 007311 605 QRF 607 (608)
Q Consensus 605 ~~~ 607 (608)
++.
T Consensus 199 ~k~ 201 (202)
T d2h1ia1 199 DKA 201 (202)
T ss_dssp HHH
T ss_pred HHh
Confidence 874
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.81 E-value=1.2e-19 Score=175.00 Aligned_cols=183 Identities=17% Similarity=0.187 Sum_probs=131.2
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
...++.||+|||+|+|+..|. .+.+.|.+++.+++++++.... +.+.|+...
T Consensus 20 ~~~~p~vv~lHG~g~~~~~~~----~l~~~l~~~~~~l~~~~~~~~~------------------------~~~~~~~~~ 71 (209)
T d3b5ea1 20 KESRECLFLLHGSGVDETTLV----PLARRIAPTATLVAARGRIPQE------------------------DGFRWFERI 71 (209)
T ss_dssp SSCCCEEEEECCTTBCTTTTH----HHHHHHCTTSEEEEECCSEEET------------------------TEEESSCEE
T ss_pred CCCCCEEEEEcCCCCCHHHHH----HHHHHhccCcEEEeeccCcCcc------------------------cCccccccC
Confidence 345789999999999999998 8888888889999999885433 234454311
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
. .+.++. ...........+.|..+.++. ....+|+||||||.+|+.++.+. +..+++
T Consensus 72 ~------------~~~~~~---~~~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~-----p~~~~~ 131 (209)
T d3b5ea1 72 D------------PTRFEQ---KSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLH-----PGIVRL 131 (209)
T ss_dssp E------------TTEECH---HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----TTSCSE
T ss_pred C------------ccccch---hhHHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhC-----CCcceE
Confidence 0 111111 111222333344444444443 34557999999999999999854 567999
Q ss_pred EEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHH
Q 007311 526 AILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSF 603 (608)
Q Consensus 526 vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~F 603 (608)
+|+++|..+..........++|++++||+ +|++++ ..++++.+.+... .+++.++++||.++ +++++.+++|
T Consensus 132 ~v~~~g~~~~~~~~~~~~~~~p~~~~~G~---~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~ggH~i~--~~~~~~~~~w 205 (209)
T d3b5ea1 132 AALLRPMPVLDHVPATDLAGIRTLIIAGA---ADETYG-PFVPALVTLLSRHGAEVDARIIPSGHDIG--DPDAAIVRQW 205 (209)
T ss_dssp EEEESCCCCCSSCCCCCCTTCEEEEEEET---TCTTTG-GGHHHHHHHHHHTTCEEEEEEESCCSCCC--HHHHHHHHHH
T ss_pred EEEeCCccccccccccccccchheeeecc---CCCccC-HHHHHHHHHHHHCCCCeEEEEECCCCCCC--HHHHHHHHHH
Confidence 99999988766555566788999999999 899997 5667777777753 36778888999995 4789999999
Q ss_pred HH
Q 007311 604 LQ 605 (608)
Q Consensus 604 l~ 605 (608)
|+
T Consensus 206 l~ 207 (209)
T d3b5ea1 206 LA 207 (209)
T ss_dssp HH
T ss_pred hC
Confidence 96
|
| >d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Single-domain sulfurtransferase domain: Sulfurtransferase GlpE species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=2.1e-19 Score=155.85 Aligned_cols=99 Identities=22% Similarity=0.405 Sum_probs=84.9
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
-+.||++|+.+++++ ++++|||||++.||+.|||+| +++.+. .++..++. +.+++++
T Consensus 4 ~~~Is~~e~~~~l~~-------------~~~~liDvR~~~e~~~ghI~g----A~~ip~---~~l~~~~~---~~~~~~~ 60 (108)
T d1gmxa_ 4 FECINVADAHQKLQE-------------KEAVLVDIRDPQSFAMGHAVQ----AFHLTN---DTLGAFMR---DNDFDTP 60 (108)
T ss_dssp CEEECHHHHHHHHHT-------------TCCEEEECSCHHHHHHCEETT----CEECCH---HHHHHHHH---HSCTTSC
T ss_pred CCEeCHHHHHHHHHC-------------CCeEEEECCCHHHHHhcCCCC----cccccc---hhHHHHhh---hccccCc
Confidence 457999999999986 589999999999999999999 566553 23444443 3478999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
||+||.+|.||..++.+|+++ ||+|||.|+|||.+|.+++|.
T Consensus 61 ivv~c~~g~rs~~~a~~L~~~--G~~~v~~l~GG~~~W~~~~p~ 102 (108)
T d1gmxa_ 61 VMVMCYHGNSSKGAAQYLLQQ--GYDVVYSIDGGFEAWQRQFPA 102 (108)
T ss_dssp EEEECSSSSHHHHHHHHHHHH--TCSSEEEETTHHHHHHHHCGG
T ss_pred ccccCCCChHHHHHHHHHHHc--CCCCEEEEcChHHHHHHcCCC
Confidence 999999999999999999998 999999999999999988764
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.77 E-value=1.1e-17 Score=159.37 Aligned_cols=181 Identities=19% Similarity=0.189 Sum_probs=135.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+.+|+||+|||+|++++.|. .+.+.|.+++.+++++++.... ....|+...
T Consensus 15 ~~~P~vi~lHG~G~~~~~~~----~~~~~l~~~~~v~~~~~~~~~~------------------------~~~~~~~~~- 65 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDENQFF----DFGARLLPQATILSPVGDVSEH------------------------GAARFFRRT- 65 (203)
T ss_dssp TTSCEEEEECCTTCCHHHHH----HHHHHHSTTSEEEEECCSEEET------------------------TEEESSCBC-
T ss_pred CCCCEEEEECCCCCCHHHHH----HHHHHhccCCeEEEeccccccc------------------------ccccccccc-
Confidence 45789999999999999998 7777787789999998874322 011111100
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH-----hCCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ-----EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~-----~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
... ....+++..+++.+...++. ......++||||||.+++.++.. .+..++
T Consensus 66 -----------~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~-----~p~~~~ 122 (203)
T d2r8ba1 66 -----------GEG-------VYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIE-----QPELFD 122 (203)
T ss_dssp -----------GGG-------CBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHH-----STTTCS
T ss_pred -----------Ccc-------ccchhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHh-----hhhccc
Confidence 000 01134455566666555543 23456799999999999999984 366789
Q ss_pred EEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHH
Q 007311 525 FAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 525 ~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~ 602 (608)
++|++++..|............|++++||+ +|++||.+.++++.+.++.. .++++++++||.++ +++++++.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~i~hG~---~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~ggH~~~--~~~~~~~~~ 197 (203)
T d2r8ba1 123 AAVLMHPLIPFEPKISPAKPTRRVLITAGE---RDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR--SGEIDAVRG 197 (203)
T ss_dssp EEEEESCCCCSCCCCCCCCTTCEEEEEEET---TCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC--HHHHHHHHH
T ss_pred ceeeeccccccccccccccccchhhccccC---CCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCcCC--HHHHHHHHH
Confidence 999999998877655566788999999999 89999999999999998753 35678889999985 489999999
Q ss_pred HHHHh
Q 007311 603 FLQRF 607 (608)
Q Consensus 603 Fl~~~ 607 (608)
||.+.
T Consensus 198 wl~~~ 202 (203)
T d2r8ba1 198 FLAAY 202 (203)
T ss_dssp HHGGG
T ss_pred HHHhc
Confidence 99764
|
| >d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Thiosulfate sulfurtransferase PA2603 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.74 E-value=2.1e-18 Score=155.67 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=87.9
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.|+|+|++++|+++ ++++|||||++.||+.|||+| +++.+ ..+++.++.+ +..+++++|
T Consensus 24 ~~Is~~el~~~l~~~------------~~~~liDvR~~~e~~~ghIpG----Ai~ip---~~~l~~~~~~-l~~~~~~~i 83 (136)
T d1yt8a1 24 PSLAAEEVQALLDAR------------AEAVILDARRFDEYQTMSIPG----GISVP---GAELVLRVAE-LAPDPRTRV 83 (136)
T ss_dssp CEECHHHHHHHHHTT------------CSEEEEECSCHHHHHHSBCTT----CEECC---GGGHHHHHHH-HCCSTTSEE
T ss_pred CccCHHHHHHHHhcC------------CCcEEEEcCChhhccceecCC----chhhh---hhHHHHHhhc-ccccccceE
Confidence 479999999999763 679999999999999999999 55555 3456766665 334578899
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCc-EEEcCccHHHHHHhCCCCCeecee
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFEN-VFQLYGGIQRYLEQFPDGGFFKGK 259 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~n-V~~L~GGi~~w~~~~~~~~~~~G~ 259 (608)
|+||.+|.|+..++.+|++. ||+| ||+|.|||.+|.++ ...+.+|+
T Consensus 84 V~~C~~g~rs~~aa~~L~~~--G~~~~V~~L~GG~~~W~~~--G~pve~g~ 130 (136)
T d1yt8a1 84 IVNCAGRTRSIIGTQSLLNA--GIPNPVAALRNGTIGWTLA--GQQLEHGQ 130 (136)
T ss_dssp EEECSSSHHHHHHHHHHHHT--TCSSCEEEETTHHHHHHHT--TCCCBCSC
T ss_pred EEEcCCCCchHHHHHHHHHc--CCCceEEEeCCcHHHHHHC--CCCceeCC
Confidence 99999999999999999997 9987 99999999999875 23456665
|
| >d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Single-domain sulfurtransferase domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) species: Wolinella succinogenes [TaxId: 844]
Probab=99.72 E-value=6.4e-18 Score=152.63 Aligned_cols=102 Identities=21% Similarity=0.313 Sum_probs=83.9
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...|||+|+.++|++. ++++|||||++.||+.+|+++... +++.+ ...+..++.. ...+++++
T Consensus 22 ~~~Isp~e~~~ll~~~------------~~~~lIDvR~~~E~~~~hip~i~~-a~~ip---~~~l~~~~~~-~~~~~~~~ 84 (137)
T d1qxna_ 22 MVMLSPKDAYKLLQEN------------PDITLIDVRDPDELKAMGKPDVKN-YKHMS---RGKLEPLLAK-SGLDPEKP 84 (137)
T ss_dssp SEEECHHHHHHHHHHC------------TTSEEEECCCHHHHHHTCEECCSS-EEECC---TTTSHHHHHH-HCCCTTSC
T ss_pred CCEEcHHHHHHHHHcC------------cCEEEEECCcHHHHHHhccccccc-cccCC---cccccccccc-cccCcccc
Confidence 4579999999999763 689999999999999999765321 33333 3455555544 34578999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.||.+|+.+|++. ||+|||+|+|||.+|.++
T Consensus 85 ivvyC~~G~rs~~aa~~L~~~--G~~nV~~l~GG~~~W~~~ 123 (137)
T d1qxna_ 85 VVVFCKTAARAALAGKTLREY--GFKTIYNSEGGMDKWLEE 123 (137)
T ss_dssp EEEECCSSSCHHHHHHHHHHH--TCSCEEEESSCHHHHHHT
T ss_pred eeeeecccchHHHHHHHHHHc--CCCcEEEecCHHHHHHHc
Confidence 999999999999999999998 999999999999999987
|
| >d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Thiosulfate sulfurtransferase PA2603 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.71 E-value=1.1e-17 Score=142.75 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=78.8
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
.|++|++++|.+. ++++|||||+++||+.|||+| +++.+.. .+...+.. +...++++|++
T Consensus 4 ~S~~~l~~~l~~~------------~~~~liDvR~~~e~~~ghIpg----Ai~~~~~---~~~~~~~~-~~~~~~~~vv~ 63 (101)
T d1yt8a2 4 RTFHDIRAALLAR------------RELALLDVREEDPFAQAHPLF----AANLPLS---RLELEIHA-RVPRRDTPITV 63 (101)
T ss_dssp ECHHHHHHHHHHT------------CCBEEEECSCHHHHTTSBCTT----CEECCGG---GHHHHHHH-HSCCTTSCEEE
T ss_pred CcHHHHHHHHHCC------------CCeEEEECCCHHHHHhccCCC----ccccccc---chhhhhhh-cccccCceeee
Confidence 5889999988764 689999999999999999999 5555432 23333322 33457889999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||++|.||.+++.+|++. ||+|||+|+|||.+|.++
T Consensus 64 ~~~~g~~s~~~~~~l~~~--G~~nV~~l~GG~~~W~~a 99 (101)
T d1yt8a2 64 YDDGEGLAPVAAQRLHDL--GYSDVALLDGGLSGWRNA 99 (101)
T ss_dssp ECSSSSHHHHHHHHHHHT--TCSSEEEETTHHHHHHHT
T ss_pred ccchhhhHHHHHHHHHHc--CCCcEEEeCChHHHHHHC
Confidence 999999999999999997 999999999999999864
|
| >d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Thiosulfate sulfurtransferase PA2603 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.68 E-value=7.8e-18 Score=150.68 Aligned_cols=99 Identities=18% Similarity=0.265 Sum_probs=80.4
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
.+.|+++|+++++++. +++++|||||++.||+.|||+| +++.+.. ++..+... ....++++
T Consensus 22 ~~~I~~~e~~~~l~~~-----------~~~~~liDvR~~~e~~~ghipg----ai~~p~~---~~~~~~~~-~~~~~~~~ 82 (130)
T d1yt8a4 22 VERLDLAGLAQWQDEH-----------DRTTYLLDVRTPEEYEAGHLPG----SRSTPGG---QLVQETDH-VASVRGAR 82 (130)
T ss_dssp CEEECHHHHHHHHHCT-----------TSCEEEEECSCHHHHHHCBCTT----CEECCHH---HHHHSHHH-HCCSBTCE
T ss_pred CcccCHHHHHHHHHcc-----------CCCEEEEECCCcHHHhcCccCC----ccccccc---cccccccc-ccCCccce
Confidence 3689999999999863 3568999999999999999999 5555422 22222221 34478999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.||..|+.+|+++ || +||.|+|||.+|..+
T Consensus 83 ivl~C~~G~rS~~aa~~L~~~--G~-~v~~l~GG~~aw~~~ 120 (130)
T d1yt8a4 83 LVLVDDDGVRANMSASWLAQM--GW-QVAVLDGLSEADFSE 120 (130)
T ss_dssp EEEECSSSSHHHHHHHHHHHT--TC-EEEEECSCCGGGCCB
T ss_pred EEeecCCCccHHHHHHHHHHc--CC-CeEEEcCchHHHHHh
Confidence 999999999999999999997 99 899999999999765
|
| >d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Single-domain sulfurtransferase domain: Thiosulfate sulfurtransferase/Senescence-associated protein species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=4.2e-17 Score=143.51 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=81.1
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCc-ccccCCCchHHHHhhh-hhcC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP-EIRQFSDLPTWIDNNA-EQLQ 205 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~-~~~~~~~~~~~~~~~~-~~~k 205 (608)
....+++++++++++. +.+|||||++.||+.|||+|+...++.. ........+.++.+.. ...+
T Consensus 6 ~p~~i~~~~a~~l~~~--------------g~~liDvR~~~e~~~ghi~ga~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (119)
T d1tq1a_ 6 VPSSVSVTVAHDLLLA--------------GHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQ 71 (119)
T ss_dssp CCEEEEHHHHHHHHHH--------------TCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCT
T ss_pred CCCccCHHHHHHHHHC--------------cCEEEECCCHHHHHcCCCCCccchhhcccccccccccHHHHHHHHHhcCC
Confidence 3567899999999976 4579999999999999999953222111 0111222334443322 2468
Q ss_pred CCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 206 GKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 206 ~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+++||+||.+|.||.+++.+|++. ||+|||+|+|||.+|.++
T Consensus 72 ~~~iv~~C~~G~rs~~a~~~L~~~--G~~nv~~l~GG~~~W~~~ 113 (119)
T d1tq1a_ 72 SDNIIVGCQSGGRSIKATTDLLHA--GFTGVKDIVGGYSAWAKN 113 (119)
T ss_dssp TSSEEEEESSCSHHHHHHHHHHHH--HCCSEEEEECCHHHHHHH
T ss_pred CcEEEEEcCCcCcHHHHHHHHHhc--ccCCeEEecChHHHHHHC
Confidence 999999999999999999999998 999999999999999876
|
| >d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Thiosulfate sulfurtransferase PA2603 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=3.1e-16 Score=144.72 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=80.6
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...|+|+++.++|++ ++++|||||+..||+.|||+| +++.+. .++...+ ....++++
T Consensus 4 ~~~Is~~el~~~l~~-------------~~~~ivDvR~~~e~~~ghIpg----a~~~~~---~~~~~~~---~~~~~~~~ 60 (157)
T d1yt8a3 4 ADTIDPTTLADWLGE-------------PGTRVLDFTASANYAKRHIPG----AAWVLR---SQLKQAL---ERLGTAER 60 (157)
T ss_dssp CCEECHHHHHHHTTS-------------TTEEEEECSCHHHHHHCBCTT----CEECCG---GGHHHHH---HHHCCCSE
T ss_pred CCEECHHHHHHHHhC-------------CCeEEEEeCCHHHHhhccccc----ceeccc---ccccccc---cccccCcc
Confidence 457999999999975 579999999999999999999 444432 2333333 23568999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+|.||..++..|++. ||+||++|+|||.+|.++
T Consensus 61 vv~~c~~g~rs~~~a~~l~~~--G~~~v~~L~GG~~~W~~a 99 (157)
T d1yt8a3 61 YVLTCGSSLLARFAVAEVQAL--SGKPVFLLDGGTSAWVAA 99 (157)
T ss_dssp EEEECSSSHHHHHHHHHHHHH--HCSCEEEETTHHHHHHHT
T ss_pred eeeccCCcchHHHHHHHHhcc--cCceEEEecCCHHHHhhC
Confidence 999999999999999999997 999999999999999875
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.60 E-value=3.5e-15 Score=146.84 Aligned_cols=174 Identities=16% Similarity=0.154 Sum_probs=120.1
Q ss_pred CccEEEEecCCCCChHH---HHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFRQNASS---FKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~---f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..|+||||||+|.+... |. .+.+.|.++++++.+|.| ... ...+...
T Consensus 25 ~~p~ivllHG~~~~~~~~~~~~----~~~~~L~~~~~vi~~D~~--------G~G------------------~S~~~~~ 74 (281)
T d1c4xa_ 25 QSPAVVLLHGAGPGAHAASNWR----PIIPDLAENFFVVAPDLI--------GFG------------------QSEYPET 74 (281)
T ss_dssp TSCEEEEECCCSTTCCHHHHHG----GGHHHHHTTSEEEEECCT--------TST------------------TSCCCSS
T ss_pred CCCEEEEECCCCCCCcHHHHHH----HHHHHHhCCCEEEEEeCC--------CCc------------------ccccccc
Confidence 45789999999987654 55 455666678999999988 110 0000000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.. ......++..++.+.++++... ....|+|||+||.+|+.+|.++ +..++++
T Consensus 75 -------------------~~--~~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~l 128 (281)
T d1c4xa_ 75 -------------------YP--GHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEA-----PERFDKV 128 (281)
T ss_dssp -------------------CC--SSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEE
T ss_pred -------------------cc--ccchhhHHHhhhhccccccccccccceeccccccccccccccccc-----cccccce
Confidence 00 0012234555666777777654 4458999999999999999854 4568999
Q ss_pred EEecCCCCCccc--------------------------------------------------------------------
Q 007311 527 ILCSGFALHSAE-------------------------------------------------------------------- 538 (608)
Q Consensus 527 IlisG~~~~~~~-------------------------------------------------------------------- 538 (608)
|++++.......
T Consensus 129 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (281)
T d1c4xa_ 129 ALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGM 208 (281)
T ss_dssp EEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred EEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhh
Confidence 998876433210
Q ss_pred -------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .+++..+ +||.+..+. ++.+.|.+||+
T Consensus 209 ~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 209 ESLVIPPATLGRLPHDVLVFHGR---QDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFR 280 (281)
T ss_dssp GGGCCCHHHHTTCCSCEEEEEET---TCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred hhhccchhhhhhhccceEEEEeC---CCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHhC
Confidence 1235789999999999 8999999999999999976 5555555 699875532 35677788876
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.60 E-value=5.7e-15 Score=145.24 Aligned_cols=173 Identities=17% Similarity=0.177 Sum_probs=121.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++||||||+|.++..|......+...+..+++++.+|.| ... ..... .
T Consensus 31 ~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~--------G~G-------------------~S~~~--~--- 78 (283)
T d2rhwa1 31 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSP--------GFN-------------------KSDAV--V--- 78 (283)
T ss_dssp SEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCT--------TST-------------------TSCCC--C---
T ss_pred CeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCC--------CCc-------------------ccccc--c---
Confidence 579999999999999987666677777788999999988 110 00000 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
. .........+.+.++++..+ ....++|||+||.+|+.+|.++ +..++++|++++
T Consensus 79 ------------~-------~~~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~ 134 (283)
T d2rhwa1 79 ------------M-------DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEY-----PDRIGKLILMGP 134 (283)
T ss_dssp ------------C-------SSCHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESC
T ss_pred ------------c-------cccccchhhhhcccccccccccccccccccchHHHHHHHHHHh-----hhhcceEEEeCC
Confidence 0 00112223455666666654 4557999999999999999855 457899999875
Q ss_pred CCCCcc-------c------------------------------------------------------------------
Q 007311 532 FALHSA-------E------------------------------------------------------------------ 538 (608)
Q Consensus 532 ~~~~~~-------~------------------------------------------------------------------ 538 (608)
...... .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (283)
T d2rhwa1 135 GGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWD 214 (283)
T ss_dssp SCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGC
T ss_pred CcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccc
Confidence 432110 0
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+++++|+ +|.++|.+.++++.+.+++ .++++. ++||.++.+. ...+.|.+||++
T Consensus 215 ~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 215 VTARLGEIKAKTFITWGR---DDRFVPLDHGLKLLWNIDD--ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp CGGGGGGCCSCEEEEEET---TCSSSCTHHHHHHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred hHHHHhhCCCCEEEEEeC---CCCCcCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 1234689999999999 8999999999999999876 565555 5699876543 256778888875
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.60 E-value=9.3e-15 Score=143.50 Aligned_cols=172 Identities=14% Similarity=0.112 Sum_probs=115.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++||||||++++...|. .+.+.|.++++++.+|-| +.. ...+-. .
T Consensus 28 gp~vv~lHG~~~~~~~~~----~~~~~l~~~~~vi~~D~~--------G~G------------------~s~~~~-~--- 73 (293)
T d1ehya_ 28 GPTLLLLHGWPGFWWEWS----KVIGPLAEHYDVIVPDLR--------GFG------------------DSEKPD-L--- 73 (293)
T ss_dssp SSEEEEECCSSCCGGGGH----HHHHHHHTTSEEEEECCT--------TST------------------TSCCCC-T---
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhcCCEEEEecCC--------ccc------------------CCcccc-c---
Confidence 467999999999999999 666666678999999988 110 000000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
......++++.++.+.++++..+ ....|+||||||.+|+.+|.++ +..+.++|+++
T Consensus 74 ------------------~~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~ 130 (293)
T d1ehya_ 74 ------------------NDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKY-----SDRVIKAAIFD 130 (293)
T ss_dssp ------------------TCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHT-----GGGEEEEEEEC
T ss_pred ------------------cccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccC-----ccccceeeeee
Confidence 00012345666667777777654 4557999999999999999865 45688888888
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+..+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (293)
T d1ehya_ 131 PIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGG 210 (293)
T ss_dssp CSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHH
T ss_pred ccCccccchhhhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhh
Confidence 75432100
Q ss_pred -----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHH-HHHHhccCCcEEEEe-CCCCcCCCChhhHHH
Q 007311 539 -----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKE-LAKAFEEGCSVIIEH-DCGHIIPTRSPYIDE 599 (608)
Q Consensus 539 -----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~-l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~ 599 (608)
.....+++|+++|+|+ +|+++|.+...+ +.+.+++ .++++. ++||.++.+ ..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e--~Pe~ 283 (293)
T d1ehya_ 211 FNYYRANIRPDAALWTDLDHTMSDLPVTMIWGL---GDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVE--KPEI 283 (293)
T ss_dssp HHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEEC---CSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHH--CHHH
T ss_pred hhhhhhccccchhhhhhhhhhccCCceEEEEeC---CCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHH--CHHH
Confidence 0123578999999999 899999877655 5555554 666655 569998663 3344
Q ss_pred HHHHHHHh
Q 007311 600 IKSFLQRF 607 (608)
Q Consensus 600 i~~Fl~~~ 607 (608)
+.+.|.+|
T Consensus 284 ~~~~I~~F 291 (293)
T d1ehya_ 284 AIDRIKTA 291 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555544
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.60 E-value=2.6e-15 Score=140.19 Aligned_cols=162 Identities=19% Similarity=0.198 Sum_probs=111.2
Q ss_pred cEEEEecCCCCChHH--HHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 373 LRILCLHGFRQNASS--FKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 373 ~~iLlLHG~G~na~~--f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+||++|||++|+.. |. .|++.|. .+++++.+|.|-. + .
T Consensus 2 k~V~~vHG~~~~~~~~~~~----~l~~~L~~~G~~v~~~d~p~~---------------------------~----~--- 43 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFP----WLKKRLLADGVQADILNMPNP---------------------------L----Q--- 43 (186)
T ss_dssp CEEEEECCTTCCTTSTTHH----HHHHHHHHTTCEEEEECCSCT---------------------------T----S---
T ss_pred CEEEEECCCCCCcchhHHH----HHHHHHHhCCCEEEEeccCCC---------------------------C----c---
Confidence 379999999999865 55 5555554 5799999998710 0 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
..+++.++.|...+.......+|+||||||.+|+.++.+.+ ....+.+++..
T Consensus 44 -------------------------~~~~~~~~~l~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~~---~~~~~~~l~~~ 95 (186)
T d1uxoa_ 44 -------------------------PRLEDWLDTLSLYQHTLHENTYLVAHSLGCPAILRFLEHLQ---LRAALGGIILV 95 (186)
T ss_dssp -------------------------CCHHHHHHHHHTTGGGCCTTEEEEEETTHHHHHHHHHHTCC---CSSCEEEEEEE
T ss_pred -------------------------chHHHHHHHHHHHHhccCCCcEEEEechhhHHHHHHHHhCC---ccceeeEEeec
Confidence 01334455566666666666789999999999999998543 12345666666
Q ss_pred cCCCCCccc--------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC--
Q 007311 530 SGFALHSAE--------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR-- 593 (608)
Q Consensus 530 sG~~~~~~~--------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~-- 593 (608)
+++...... .....+.+|+|++||+ +|++||.+.++++++.+.. ..++..++||.+..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lvi~g~---~D~~vp~~~~~~l~~~~~~--~~~~~~~~gH~~~~~~~ 170 (186)
T d1uxoa_ 96 SGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASK---DDQIVPFSFSKDLAQQIDA--ALYEVQHGGHFLEDEGF 170 (186)
T ss_dssp TCCSSCCTTCGGGGGGTCSCCCHHHHHHHEEEEEEEEET---TCSSSCHHHHHHHHHHTTC--EEEEETTCTTSCGGGTC
T ss_pred ccccccchhhhhhhhhhcccccccccccCCCCEEEEecC---CCCCCCHHHHHHHHHHcCC--EEEEeCCCCCcCccccC
Confidence 665543321 1123567999999999 8999999999999998842 344445669986543
Q ss_pred ---hhhHHHHHHHHH
Q 007311 594 ---SPYIDEIKSFLQ 605 (608)
Q Consensus 594 ---~~~~~~i~~Fl~ 605 (608)
+...+.|.+||.
T Consensus 171 ~~~~~~~~~l~~~~~ 185 (186)
T d1uxoa_ 171 TSLPIVYDVLTSYFS 185 (186)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHc
Confidence 345667777765
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.58 E-value=1.8e-14 Score=142.42 Aligned_cols=174 Identities=17% Similarity=0.184 Sum_probs=118.5
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++|||+||+|.+...|.. .+.+.| ..+++++.+|-| ... . ..+..
T Consensus 21 ~~p~vvl~HG~~~~~~~~~~---~~~~~l~~~g~~vi~~D~~--------G~G------~------------S~~~~--- 68 (297)
T d1q0ra_ 21 ADPALLLVMGGNLSALGWPD---EFARRLADGGLHVIRYDHR--------DTG------R------------STTRD--- 68 (297)
T ss_dssp TSCEEEEECCTTCCGGGSCH---HHHHHHHTTTCEEEEECCT--------TST------T------------SCCCC---
T ss_pred CCCEEEEECCCCcChhHHHH---HHHHHHHhCCCEEEEEeCC--------CCc------c------------ccccc---
Confidence 35689999999999998852 344444 357999999977 110 0 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.+. ....+.+..+.+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|+
T Consensus 69 ---------------~~~-----~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~-----P~~v~~lvl 123 (297)
T d1q0ra_ 69 ---------------FAA-----HPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDH-----HDRLSSLTM 123 (297)
T ss_dssp ---------------TTT-----SCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred ---------------ccc-----cccccchhhhhhccccccccccceeeccccccchhhhhhhccc-----ccceeeeEE
Confidence 000 01135555666666776654 4457999999999999999854 457899998
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++.......
T Consensus 124 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (297)
T d1q0ra_ 124 LLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEER 203 (297)
T ss_dssp ESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHH
T ss_pred EccccccccchhhhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHH
Confidence 8765432110
Q ss_pred --------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCC
Q 007311 539 --------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIP 591 (608)
Q Consensus 539 --------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip 591 (608)
.....|++|+|+|+|+ +|+++|.+.++++++.+++ .++++.+ +||.++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~ 278 (297)
T d1q0ra_ 204 AIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAE---HDPIAPAPHGKHLAGLIPT--ARLAEIPGMGHALP 278 (297)
T ss_dssp HHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEET---TCSSSCTTHHHHHHHTSTT--EEEEEETTCCSSCC
T ss_pred hhhhccccchhhhhhhhhhhccccchhhhhccCCceEEEEeC---CCCCCCHHHHHHHHHhCCC--CEEEEECCCCCcch
Confidence 1235678999999999 8999999999999999876 5666665 599987
Q ss_pred CChh--hHHHHHHHHHH
Q 007311 592 TRSP--YIDEIKSFLQR 606 (608)
Q Consensus 592 ~~~~--~~~~i~~Fl~~ 606 (608)
.+.+ ..+.|.+||++
T Consensus 279 ~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 279 SSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GGGHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHh
Confidence 7432 45566666654
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.58 E-value=6.7e-15 Score=143.06 Aligned_cols=168 Identities=18% Similarity=0.190 Sum_probs=118.7
Q ss_pred cEEEEecCCCCChHH---HHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 373 LRILCLHGFRQNASS---FKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 373 ~~iLlLHG~G~na~~---f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++||||||+|++.+. |. .+...|.++++++.+|.| .+. ...+ +
T Consensus 23 ~~vvllHG~~~~~~~~~~~~----~~~~~l~~~~~v~~~D~~--------G~G------------------~S~~---~- 68 (268)
T d1j1ia_ 23 QPVILIHGGGAGAESEGNWR----NVIPILARHYRVIAMDML--------GFG------------------KTAK---P- 68 (268)
T ss_dssp SEEEEECCCSTTCCHHHHHT----TTHHHHTTTSEEEEECCT--------TST------------------TSCC---C-
T ss_pred CeEEEECCCCCCccHHHHHH----HHHHHHhcCCEEEEEccc--------ccc------------------cccC---C-
Confidence 469999999987754 55 455666778999999988 110 0000 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.....++...+.+.++++... ....++|||+||.+|+.+|.++ +..++++|
T Consensus 69 ----------------------~~~~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~-----p~~v~~li 121 (268)
T d1j1ia_ 69 ----------------------DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLH-----SELVNALV 121 (268)
T ss_dssp ----------------------SSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHC-----GGGEEEEE
T ss_pred ----------------------ccccccccccccchhhHHHhhhcccceeeeccccccccchhhccC-----hHhhheee
Confidence 001234555666677776654 2347999999999999999855 45789999
Q ss_pred EecCCCCCccc---------------------------------------------------------------------
Q 007311 528 LCSGFALHSAE--------------------------------------------------------------------- 538 (608)
Q Consensus 528 lisG~~~~~~~--------------------------------------------------------------------- 538 (608)
++++.......
T Consensus 122 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (268)
T d1j1ia_ 122 LMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDP 201 (268)
T ss_dssp EESCCBCCCC----------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCH
T ss_pred ecCCCccccccchhhhhhhhhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchh
Confidence 98875432210
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+|+|+ +|.++|.+.++++.+.+++ .+++.. ++||.++.+. .+.+.|.+||.+
T Consensus 202 ~~l~~i~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 202 EFIRKVQVPTLVVQGK---DDKVVPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp HHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred hhHhhCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 1246789999999999 8999999999999999976 555555 5699875532 367888888875
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.58 E-value=1.2e-14 Score=141.61 Aligned_cols=172 Identities=14% Similarity=0.184 Sum_probs=117.5
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++||||||+|.++..|... ..+.+.|.++++++.+|.| ... .-..+.
T Consensus 24 ~pvvllHG~~~~~~~~~~~-~~~~~~l~~~~~vi~~Dl~--------G~G---------------------~S~~~~--- 70 (271)
T d1uk8a_ 24 QPVILIHGSGPGVSAYANW-RLTIPALSKFYRVIAPDMV--------GFG---------------------FTDRPE--- 70 (271)
T ss_dssp SEEEEECCCSTTCCHHHHH-TTTHHHHTTTSEEEEECCT--------TST---------------------TSCCCT---
T ss_pred CeEEEECCCCCCccHHHHH-HHHHHHHhCCCEEEEEeCC--------CCC---------------------Cccccc---
Confidence 5699999999887665411 1445666778999999988 110 000000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
.....++.....+..+++..+ ....|+|||+||.+|+.+|.+. +..++++|++++
T Consensus 71 -------------------~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~~~~lil~~~ 126 (271)
T d1uk8a_ 71 -------------------NYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRY-----SERVDRMVLMGA 126 (271)
T ss_dssp -------------------TCCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESC
T ss_pred -------------------cccccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhh-----hccchheeeccc
Confidence 001123444555556665544 4558999999999999999854 456888888876
Q ss_pred CCCCccc-----------------------------------------------------------------------cc
Q 007311 532 FALHSAE-----------------------------------------------------------------------FE 540 (608)
Q Consensus 532 ~~~~~~~-----------------------------------------------------------------------~~ 540 (608)
..+.... ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (271)
T d1uk8a_ 127 AGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDED 206 (271)
T ss_dssp CCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHH
T ss_pred CCCcccchhhhhhhhhccchhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHH
Confidence 5433210 12
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
...+++|+|+++|+ +|.++|.+.++.+.+.+++ .++++. ++||.++.+.+ ..+.|.+||++
T Consensus 207 l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 207 IKTLPNETLIIHGR---EDQVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HTTCCSCEEEEEET---TCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred HHhhccceeEEecC---CCCCcCHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 45789999999999 8999999999999999976 555555 56998655432 56788888875
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.57 E-value=5.9e-15 Score=145.07 Aligned_cols=169 Identities=13% Similarity=0.081 Sum_probs=119.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||++++...|. .+.+.|.++++++.+|.| ... .=+.+
T Consensus 29 ~p~lvllHG~~~~~~~~~----~~~~~L~~~~~vi~~d~~--------G~G---------------------~S~~~--- 72 (291)
T d1bn7a_ 29 GTPVLFLHGNPTSSYLWR----NIIPHVAPSHRCIAPDLI--------GMG---------------------KSDKP--- 72 (291)
T ss_dssp SSCEEEECCTTCCGGGGT----TTHHHHTTTSCEEEECCT--------TST---------------------TSCCC---
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhcCCEEEEEeCC--------CCc---------------------ccccc---
Confidence 457999999999999998 556667778999999988 110 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....+++.++.|.++++..+ ....|+||||||.+|+.++.+. +..++.+|+++
T Consensus 73 --------------------~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~~~~li~~~ 127 (291)
T d1bn7a_ 73 --------------------DLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRN-----PERVKGIACME 127 (291)
T ss_dssp --------------------SCCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHC-----GGGEEEEEEEE
T ss_pred --------------------ccccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhC-----Ccceeeeeeec
Confidence 001235556667777777754 4457999999999999999855 45688888876
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+.......
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (291)
T d1bn7a_ 128 FIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIP 207 (291)
T ss_dssp ECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSC
T ss_pred cccCCccchhhhhhhhhHHHHHhhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhh
Confidence 44332110
Q ss_pred ----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh--hHHH
Q 007311 539 ----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP--YIDE 599 (608)
Q Consensus 539 ----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--~~~~ 599 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .++++ .++||.++.+.+ ..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~ 282 (291)
T d1bn7a_ 208 IAGEPANIVALVEAYMNWLHQSPVPKLLFWGT---PGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSE 282 (291)
T ss_dssp BTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE---ECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCGGGTCHHHHHHH
T ss_pred hhhhhchhhhhhhhhhhhhhcCCCCEEEEEeC---CCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHH
Confidence 0124578999999999 8999999999999999976 44444 467999876533 4566
Q ss_pred HHHHHHH
Q 007311 600 IKSFLQR 606 (608)
Q Consensus 600 i~~Fl~~ 606 (608)
|.+||+.
T Consensus 283 i~~fL~~ 289 (291)
T d1bn7a_ 283 IARWLPG 289 (291)
T ss_dssp HHHHSGG
T ss_pred HHHHHHh
Confidence 6677654
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.56 E-value=6.2e-14 Score=136.32 Aligned_cols=170 Identities=15% Similarity=0.201 Sum_probs=114.1
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||++.++..|...+..|. ..+++++.+|.| ... . +..+.
T Consensus 20 ~~ivlvHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~--------G~G------~-------S~~~~----------- 64 (274)
T d1a8qa_ 20 RPVVFIHGWPLNGDAWQDQLKAVV---DAGYRGIAHDRR--------GHG------H-------STPVW----------- 64 (274)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCT--------TST------T-------SCCCS-----------
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEeCC--------CCc------c-------ccccc-----------
Confidence 469999999999999994444443 347999999988 110 0 00000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
....+....+.+.++++... ....++|||+||++++.++.+. .+..+++++++++
T Consensus 65 --------------------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~----~p~~v~~~~~~~~ 120 (274)
T d1a8qa_ 65 --------------------DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRH----GTGRLRSAVLLSA 120 (274)
T ss_dssp --------------------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHH----CSTTEEEEEEESC
T ss_pred --------------------ccccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHh----hhccceeEEEEec
Confidence 01234455566777777654 3457899999999999877754 2567999999887
Q ss_pred CCCCccc-------------------------------------------------------------------------
Q 007311 532 FALHSAE------------------------------------------------------------------------- 538 (608)
Q Consensus 532 ~~~~~~~------------------------------------------------------------------------- 538 (608)
..+....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (274)
T d1a8qa_ 121 IPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFG 200 (274)
T ss_dssp CCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhh
Confidence 5543210
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEEe-CCCCcCCCCh----hhHHHHHHHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIEH-DCGHIIPTRS----PYIDEIKSFLQR 606 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~~-~gGH~ip~~~----~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.. +.+++.+++ .++++. ++||.+.... .+.+.|.+||++
T Consensus 201 ~~~~~~~l~~i~~Pvlii~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 201 YTDFTEDLKKFDIPTLVVHGD---DDQVVPIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HCCCHHHHTTCCSCEEEEEET---TCSSSCGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred ccchHHHHHhccceeeeeccC---CCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 1245789999999999 8999998654 567777776 555555 5699765322 255667788753
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.55 E-value=4e-14 Score=132.97 Aligned_cols=173 Identities=14% Similarity=0.100 Sum_probs=112.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
++.|||+||+++++..|. .+++.|. .++.++.+|.| .+. ....+..
T Consensus 11 ~~~vvliHG~~~~~~~~~----~l~~~L~~~G~~v~~~D~~--------G~G-------------------~s~~~~~-- 57 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVR----MLGRFLESKGYTCHAPIYK--------GHG-------------------VPPEELV-- 57 (242)
T ss_dssp SCEEEEECCTTCCTHHHH----HHHHHHHHTTCEEEECCCT--------TSS-------------------SCHHHHT--
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHHHCCCEEEEEeCC--------CCc-------------------ccccccc--
Confidence 346899999999999999 6777775 47999999988 110 0000000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. ............+...+.. .....+|+|||+||.+++.++.+. +....+++
T Consensus 58 ----------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~-------~~~~~~~~ 110 (242)
T d1tqha_ 58 ----------------H----TGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTV-------PIEGIVTM 110 (242)
T ss_dssp ----------------T----CCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTS-------CCSCEEEE
T ss_pred ----------------c----cchhHHHHHHHHHHhhhhhcccCceEEEEcchHHHHhhhhcccC-------cccccccc
Confidence 0 0011112222222333333 335568999999999999988732 23344555
Q ss_pred cCCCCCcc-c--------------------------------------------------cccCCCCCCEEEEEcCCCCC
Q 007311 530 SGFALHSA-E--------------------------------------------------FEHRSINCPSLHIFGGDLGN 558 (608)
Q Consensus 530 sG~~~~~~-~--------------------------------------------------~~~~~i~~PvL~i~G~~~~~ 558 (608)
++...... . .....+.+|+|+++|+ +
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~---~ 187 (242)
T d1tqha_ 111 CAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQAR---H 187 (242)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEET---T
T ss_pred cccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhccchhhcccccccccccccceeccccceeecc---c
Confidence 54332211 0 2345789999999999 8
Q ss_pred CcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC--hh-hHHHHHHHHHHh
Q 007311 559 DRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR--SP-YIDEIKSFLQRF 607 (608)
Q Consensus 559 D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~--~~-~~~~i~~Fl~~~ 607 (608)
|..+|.+.++++++.+.....+++.++ +||.+..+ ++ ..+.|.+||++.
T Consensus 188 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 188 DEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp CSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 999999999999999875446666664 69986543 33 678999999863
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.55 E-value=5e-14 Score=135.87 Aligned_cols=182 Identities=18% Similarity=0.094 Sum_probs=115.8
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+++.||+|||++++...|. .+.+.|. .++.++.+|.|..=. ...+....
T Consensus 22 ~~~~~vl~lHG~~~~~~~~~----~~~~~la~~G~~V~~~D~~g~g~-------------------------s~~~~~~~ 72 (238)
T d1ufoa_ 22 APKALLLALHGLQGSKEHIL----ALLPGYAERGFLLLAFDAPRHGE-------------------------REGPPPSS 72 (238)
T ss_dssp SCCEEEEEECCTTCCHHHHH----HTSTTTGGGTEEEEECCCTTSTT-------------------------SSCCCCCT
T ss_pred CCCeEEEEeCCCCCCHHHHH----HHHHHHHHCCCEEEEecCCCCCC-------------------------Cccccccc
Confidence 34689999999999999998 6666665 479999999882100 00000000
Q ss_pred CCCCccccccccCCCCCCCccc-ccccccHHHHHHHHHHHH----hHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 449 DFSGKRETNWKLADGPFDPHQY-QQQTDGLDVSLAYLKTIF----SQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~s~~~L~~~i----~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
+...+ ..........+..+...+ ...+...+++|+||||.+++.++... +.+
T Consensus 73 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~------p~~ 129 (238)
T d1ufoa_ 73 -----------------KSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEG------FRP 129 (238)
T ss_dssp -----------------TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTT------CCC
T ss_pred -----------------ccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcC------cch
Confidence 00000 000011111222222222 22456778999999999999888742 356
Q ss_pred cEEEEecCCCCCccc---------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC----C
Q 007311 524 RFAILCSGFALHSAE---------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG----C 578 (608)
Q Consensus 524 ~~vIlisG~~~~~~~---------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~----~ 578 (608)
+.++.+.+....... ......++|+|++||+ +|.+||.+.+.++++.++.. .
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~---~D~~v~~~~~~~~~~~l~~~~~~~~ 206 (238)
T d1ufoa_ 130 RGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGS---RDHIVPLARMEKTLEALRPHYPEGR 206 (238)
T ss_dssp SCEEEESCCSSCCCCCTTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEET---TCTTTTHHHHHHHHHHHGGGCTTCC
T ss_pred hheeeeeeeccccccccccccccccccchhhhhhhhhhhhhcCCCeEEEEcC---CCCccCHHHHHHHHHHHHhcCCCce
Confidence 666666655432211 1223467899999999 89999999999999988642 2
Q ss_pred cEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 579 SVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 579 ~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
..++.+++ ||.+. ++.++.+.+||.++|
T Consensus 207 ~~~~~~~g~gH~~~--~~~~~~~~~f~~~~l 235 (238)
T d1ufoa_ 207 LARFVEEGAGHTLT--PLMARVGLAFLEHWL 235 (238)
T ss_dssp EEEEEETTCCSSCC--HHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCccC--HHHHHHHHHHHHHHh
Confidence 45555554 99984 478899999998875
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.55 E-value=1.3e-14 Score=145.16 Aligned_cols=175 Identities=13% Similarity=0.110 Sum_probs=121.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++|||+||+++++..|...+..|.+ .+++++.+|-| +.. .....
T Consensus 45 ~~~p~llllHG~~~~~~~~~~~~~~l~~---~~~~vi~~Dl~--------G~G-------------------~S~~~--- 91 (310)
T d1b6ga_ 45 DAEDVFLCLHGEPTWSYLYRKMIPVFAE---SGARVIAPDFF--------GFG-------------------KSDKP--- 91 (310)
T ss_dssp TCSCEEEECCCTTCCGGGGTTTHHHHHH---TTCEEEEECCT--------TST-------------------TSCEE---
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHhhc---cCceEEEeeec--------Ccc-------------------ccccc---
Confidence 4467899999999999999955545543 47999999988 110 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.+ .....++..++.+.++++..+ ....|+||||||.+|+.+|.++ +..++++|+
T Consensus 92 ---------------~~-----~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~-----P~~V~~lvl 146 (310)
T d1b6ga_ 92 ---------------VD-----EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMAD-----PSRFKRLII 146 (310)
T ss_dssp ---------------SC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGS-----GGGEEEEEE
T ss_pred ---------------cc-----cccccccccccchhhhhhhccccccccccceecccccccchhhh-----ccccceEEE
Confidence 00 011246677777777777654 4457999999999999999844 567999999
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++..+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (310)
T d1b6ga_ 147 MNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMV 226 (310)
T ss_dssp ESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHH
T ss_pred EcCccCCCcccchhHHHHhhcchhhhhhhhhhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhh
Confidence 8765432110
Q ss_pred ----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHH
Q 007311 539 ----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEI 600 (608)
Q Consensus 539 ----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i 600 (608)
.....+++|+|+++|+ +|.+++.+..+++++.+......++..++||+++.+.+ ..+.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i 303 (310)
T d1b6ga_ 227 AQRDQACIDISTEAISFWQNDWNGQTFMAIGM---KDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREAL 303 (310)
T ss_dssp HSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET---TCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhHHhhcccCCCeEEEEeC---CCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHH
Confidence 0113578999999999 89999999999999988764234445678998765432 45566
Q ss_pred HHHHH
Q 007311 601 KSFLQ 605 (608)
Q Consensus 601 ~~Fl~ 605 (608)
.+||+
T Consensus 304 ~~Fl~ 308 (310)
T d1b6ga_ 304 KHFAE 308 (310)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66665
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.55 E-value=2.1e-14 Score=136.27 Aligned_cols=170 Identities=12% Similarity=0.093 Sum_probs=117.8
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.|||+||+++++..|. .+.+.|. .+++++.+|.| ... ...+-.
T Consensus 3 ~~vvllHG~~~~~~~w~----~~~~~L~~~g~~vi~~Dl~--------G~G------------------~S~~~~----- 47 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWY----KLKPLLEAAGHKVTALDLA--------ASG------------------TDLRKI----- 47 (258)
T ss_dssp CEEEEECCTTCCGGGGT----THHHHHHHTTCEEEECCCT--------TST------------------TCCCCG-----
T ss_pred CcEEEECCCCCCHHHHH----HHHHHHHhCCCEEEEecCC--------CCC------------------CCCCCC-----
Confidence 46999999999999999 4555554 36999999988 110 000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+.+....+...+.... ....++|||+||.+|+.++.+. +..++.+|++
T Consensus 48 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~-----p~~~~~lil~ 102 (258)
T d1xkla_ 48 --------------------EELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKY-----PQKIYAAVFL 102 (258)
T ss_dssp --------------------GGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEE
T ss_pred --------------------CCCcchHHHHHHHhhhhhcccccccccccccchhHHHHHHHhhhh-----ccccceEEEe
Confidence 011234455555556665532 3457899999999999999854 4578889998
Q ss_pred cCCCCCccc-----------------------------------------------------------------------
Q 007311 530 SGFALHSAE----------------------------------------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~~~----------------------------------------------------------------------- 538 (608)
++..+....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (258)
T d1xkla_ 103 AAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFME 182 (258)
T ss_dssp SCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHH
T ss_pred cccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhh
Confidence 876654321
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHHh
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQRF 607 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~~ 607 (608)
.....+.+|+++++|+ +|.++|.+.++++++.+++ .++++. ++||.+..+. +..+.|.+|++++
T Consensus 183 ~~~~~~~~~~~~~~~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 183 DLSKAKYFTDERFGSVKRVYIVCT---EDKGIPEEFQRWQIDNIGV--TEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHHHCCCCCTTTGGGSCEEEEEET---TCTTTTHHHHHHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred hhhhhhhcccccccccceeEeeec---CCCCCCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 1234567999999999 8999999999999999876 555555 5699865432 2567777877764
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=8.5e-15 Score=140.68 Aligned_cols=172 Identities=15% Similarity=0.189 Sum_probs=108.3
Q ss_pred CCccEEEEecCCCCChHHHHH--HHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKG--RTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~--~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..+++||||||++.+...|.. ++..|++ .+++++.+|.| . +.+-..
T Consensus 29 ~~~~~vvllHG~~~~~~~w~~~~~~~~la~---~gy~via~D~~--------G---------------------~G~S~~ 76 (208)
T d1imja_ 29 QARFSVLLLHGIRFSSETWQNLGTLHRLAQ---AGYRAVAIDLP--------G---------------------LGHSKE 76 (208)
T ss_dssp CCSCEEEECCCTTCCHHHHHHHTHHHHHHH---TTCEEEEECCT--------T---------------------SGGGTT
T ss_pred CCCCeEEEECCCCCChhHHhhhHHHHHHHH---cCCeEEEeecc--------c---------------------ccCCCC
Confidence 456789999999999999973 2333433 47999999988 1 000000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
+. + ....+. .... +.|.++++..+ ....|+||||||.+|+.++.+ .+..++++
T Consensus 77 ~~--------~---~~~~~~-------~~~~---~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~-----~p~~v~~l 130 (208)
T d1imja_ 77 AA--------A---PAPIGE-------LAPG---SFLAAVVDALELGPPVVISPSLSGMYSLPFLTA-----PGSQLPGF 130 (208)
T ss_dssp SC--------C---SSCTTS-------CCCT---HHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTS-----TTCCCSEE
T ss_pred CC--------c---ccccch-------hhhh---hhhhhcccccccccccccccCcHHHHHHHHHHH-----hhhhccee
Confidence 00 0 000000 0011 12333344333 344799999999999999983 46789999
Q ss_pred EEecCCCCCcc-ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCC-C-hhhHHHHHH
Q 007311 527 ILCSGFALHSA-EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPT-R-SPYIDEIKS 602 (608)
Q Consensus 527 IlisG~~~~~~-~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~-~-~~~~~~i~~ 602 (608)
|++++...... ......+++|+|+|||+ +|+++|.+. +..+.+++ .++++ .++||.... . ..+.+.+.+
T Consensus 131 V~~~p~~~~~~~~~~~~~i~~P~Lii~G~---~D~~~~~~~--~~~~~~~~--~~~~~i~~~gH~~~~~~p~~~~~~l~~ 203 (208)
T d1imja_ 131 VPVAPICTDKINAANYASVKTPALIVYGD---QDPMGQTSF--EHLKQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLD 203 (208)
T ss_dssp EEESCSCGGGSCHHHHHTCCSCEEEEEET---TCHHHHHHH--HHHTTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHH
T ss_pred eecCcccccccccccccccccccccccCC---cCcCCcHHH--HHHHhCCC--CeEEEECCCCCchhhhCHHHHHHHHHH
Confidence 99987654432 23467899999999999 899987543 33344444 44444 466997322 2 247788899
Q ss_pred HHHH
Q 007311 603 FLQR 606 (608)
Q Consensus 603 Fl~~ 606 (608)
||++
T Consensus 204 Fl~~ 207 (208)
T d1imja_ 204 FLQG 207 (208)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9875
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.55 E-value=1.7e-14 Score=137.57 Aligned_cols=169 Identities=9% Similarity=0.058 Sum_probs=118.2
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
-+||+||+|.++..|. .+++.|. .+++++.+|-| +.. ...+-.
T Consensus 4 ~~vliHG~~~~~~~w~----~~~~~L~~~g~~Via~Dl~--------G~G------------------~S~~~~------ 47 (256)
T d3c70a1 4 HFVLIHTICHGAWIWH----KLKPLLEALGHKVTALDLA--------ASG------------------VDPRQI------ 47 (256)
T ss_dssp EEEEECCTTCCGGGGT----THHHHHHHTTCEEEEECCT--------TST------------------TCSCCG------
T ss_pred cEEEeCCCCCCHHHHH----HHHHHHHhCCCEEEEEcCC--------CCC------------------CCCCCC------
Confidence 4799999999999999 5566664 36999999988 110 000000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++...+.+.+++.+.. ....|+|||+||.+|+.++... +..++++|+++
T Consensus 48 -------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~ 103 (256)
T d3c70a1 48 -------------------EEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKY-----CEKIAAAVFHN 103 (256)
T ss_dssp -------------------GGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHH-----GGGEEEEEEES
T ss_pred -------------------CCCCCHHHHHHHhhhhhhhhccccceeecccchHHHHHHHHhhcC-----chhhhhhheec
Confidence 001234555666666666543 4457999999999999999865 45689999998
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+..+....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (256)
T d3c70a1 104 SVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILA 183 (256)
T ss_dssp CCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHT
T ss_pred cccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhhHHHhhhh
Confidence 76554321
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHHh
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~~ 607 (608)
.....+++|+++|+|+ +|.++|.+..+++.+.+++ .++++. ++||.++.+.| ..+.|.+|+++|
T Consensus 184 ~~~~~~~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~p~--~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 184 KRPFFTKEGYGSIKKIYVWTD---QDEIFLPEFQLWQIENYKP--DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp TSCCCCTTTGGGSCEEEEECT---TCSSSCHHHHHHHHHHSCC--SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred hcchhhhhhccccceeEEeec---CCCCCCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 1123467999999999 8999999999999999876 556565 56998765422 566777777654
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.54 E-value=6e-14 Score=136.39 Aligned_cols=170 Identities=17% Similarity=0.204 Sum_probs=113.4
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||++++...|...+..|. ..+++++.+|-| ... .....
T Consensus 24 ~~ivllHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~--------G~G-------------------~S~~~------ 67 (277)
T d1brta_ 24 QPVVLIHGFPLSGHSWERQSAALL---DAGYRVITYDRR--------GFG-------------------QSSQP------ 67 (277)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCT--------TST-------------------TSCCC------
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEeCC--------CCC-------------------ccccc------
Confidence 569999999999999984444443 257999999977 110 00000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
. ....++..++.|.++++..+ ....|+||||||.+++.+++. ..+..++++|++++
T Consensus 68 --------------~-----~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~----~~p~~v~~lvl~~~ 124 (277)
T d1brta_ 68 --------------T-----TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSS----YGTARIAKVAFLAS 124 (277)
T ss_dssp --------------S-----SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHH----HCSTTEEEEEEESC
T ss_pred --------------c-----cccchhhhhhhhhhhhhccCcccccccccccchhhhhHHHHH----hhhcccceEEEecC
Confidence 0 01235556666777777655 445799999998665554443 23667999999987
Q ss_pred CCCCccc-------------------------------------------------------------------------
Q 007311 532 FALHSAE------------------------------------------------------------------------- 538 (608)
Q Consensus 532 ~~~~~~~------------------------------------------------------------------------- 538 (608)
..+....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (277)
T d1brta_ 125 LEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTT 204 (277)
T ss_dssp CCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGG
T ss_pred CCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhh
Confidence 6543311
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.....+++|+++++|+ +|.+++.+.. +.+.+.+++ .+++.. ++||.+..+.+ +.+.|.+||++
T Consensus 205 ~~~~~~~~l~~i~~P~lii~g~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 205 WYTDFRADIPRIDVPALILHGT---GDRTLPIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp TTCCCTTTGGGCCSCEEEEEET---TCSSSCGGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred hhhhHHHHHHhcCccceeEeec---CCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 1235678999999999 8999988654 556677766 555555 56998755433 56788888864
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=2.7e-15 Score=145.60 Aligned_cols=165 Identities=18% Similarity=0.232 Sum_probs=111.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||++.++..|. .+.+.|.++++++.+|.| .. ..=+ .
T Consensus 11 ~~~lvllHG~~~~~~~~~----~~~~~L~~~~~vi~~D~~--------G~---------------------G~S~--~-- 53 (256)
T d1m33a_ 11 NVHLVLLHGWGLNAEVWR----CIDEELSSHFTLHLVDLP--------GF---------------------GRSR--G-- 53 (256)
T ss_dssp SSEEEEECCTTCCGGGGG----GTHHHHHTTSEEEEECCT--------TS---------------------TTCC--S--
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhCCCEEEEEeCC--------CC---------------------CCcc--c--
Confidence 357999999999999999 666777778999999987 11 0000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
.+ ...+.+ .+...+........++||||||.+|+.+|.+. +..++++++++.
T Consensus 54 -------------~~-------~~~~~d---~~~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~-----p~~~~~l~~~~~ 105 (256)
T d1m33a_ 54 -------------FG-------ALSLAD---MAEAVLQQAPDKAIWLGWSLGGLVASQIALTH-----PERVRALVTVAS 105 (256)
T ss_dssp -------------CC-------CCCHHH---HHHHHHTTSCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESC
T ss_pred -------------cc-------cccccc---cccccccccccceeeeecccchHHHHHHHHhC-----Ccccceeeeeec
Confidence 00 011222 22222333345557999999999999999854 456788888775
Q ss_pred CCCCccc-------------------------------------------------------------------------
Q 007311 532 FALHSAE------------------------------------------------------------------------- 538 (608)
Q Consensus 532 ~~~~~~~------------------------------------------------------------------------- 538 (608)
.+.....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (256)
T d1m33a_ 106 SPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVD 185 (256)
T ss_dssp CSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCC
T ss_pred ccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccc
Confidence 4432210
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.++|.+.++++++.+++ .++++. ++||.++.+. ++.+.|.+||++
T Consensus 186 ~~~~l~~i~~P~lii~G~---~D~~~p~~~~~~l~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 253 (256)
T d1m33a_ 186 LRQPLQNVSMPFLRLYGY---LDGLVPRKVVPMLDKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQR 253 (256)
T ss_dssp CTTGGGGCCSCEEEEEET---TCSSSCGGGCC-CTTTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred hHHHHHhccCCccccccc---cCCCCCHHHHHHHHHHCCC--CEEEEECCCCCchHHHCHHHHHHHHHHHHHH
Confidence 1235689999999999 8999999999999888876 445444 5699865432 256777888765
|
| >d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: CDC25a species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=4.3e-15 Score=137.43 Aligned_cols=112 Identities=18% Similarity=0.320 Sum_probs=80.2
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh---hhhc
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN---AEQL 204 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~---~~~~ 204 (608)
..++|+|+++.++|++. -.+..++++|||||+++||+.|||+| ++|.+... .+...+.+. ....
T Consensus 21 ~~k~Is~~~l~~ll~~~-------~~~~~~~~~IIDvR~~~Ey~~gHI~g----Ainip~~~--~~~~~l~~~~~~~~~~ 87 (161)
T d1c25a_ 21 DLKYISPEIMASVLNGK-------FANLIKEFVIIDCRYPYEYEGGHIKG----AVNLHMEE--EVEDFLLKKPIVPTDG 87 (161)
T ss_dssp TSCEECHHHHHHHHTTT-------TTTTEEEEEEEECSCHHHHHTCEETT----CEECCSHH--HHHHHTTTSCCCCCTT
T ss_pred CCCccCHHHHHHHHhhh-------hhcccCCEEEEECCCHHHHHhhhcCC----cEEcCcHH--HHHHHHhhhhhhhhhc
Confidence 35789999999999752 11122579999999999999999999 55543111 011111111 1123
Q ss_pred CCCeEEEEcC-CCccHHHHHHHHHhc--------CCCCCcEEEcCccHHHHHHhCCC
Q 007311 205 QGKHVLMYCT-GGIRCEMASAYVRSK--------GAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 205 k~k~Iv~yCt-gGiR~~~a~~~L~~~--------~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
++..||+||. +|.|+.+++.+|++. ..||++||.|+||+.+|.+++++
T Consensus 88 ~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~~p~ 144 (161)
T d1c25a_ 88 KRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144 (161)
T ss_dssp SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGG
T ss_pred cCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHHCcC
Confidence 4456999996 899999999999752 24999999999999999998764
|
| >d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: CDC25b species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=5.2e-15 Score=138.64 Aligned_cols=121 Identities=16% Similarity=0.328 Sum_probs=85.9
Q ss_pred CCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHh----hhh
Q 007311 127 NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDN----NAE 202 (608)
Q Consensus 127 ~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~----~~~ 202 (608)
...++|+|+|+.++|+.. ..+..++++|||||+++||+.|||+| ++|.+...+. ...+.. ...
T Consensus 20 ~~~k~Isp~eL~~ll~~~-------~~~~~~~~lIID~R~~~Ey~~gHI~g----AiNi~~~~~~--~~~~~~~~~~~~~ 86 (174)
T d1ymka1 20 QDLKYISPETMVALLTGK-------FSNIVDKFVIVDCRYPYEYEGGHIKT----AVNLPLERDA--ESFLLKSPIAPCS 86 (174)
T ss_dssp TTSCEECHHHHHHHHTTT-------TTTTEEEEEEEECSCHHHHHTCEETT----CEECCSHHHH--HHHHHTTTCCC--
T ss_pred CCCcEeCHHHHHHHHhhh-------hhcccCCEEEEECCCchhhhhhhcCC----ccccCchHHH--HHHHHHhhhhhhh
Confidence 346789999999999752 01122479999999999999999999 5554421110 000110 012
Q ss_pred hcCCCeEEEEcC-CCccHHHHHHHHHhc--------CCCCCcEEEcCccHHHHHHhCCCCCeeceeeee
Q 007311 203 QLQGKHVLMYCT-GGIRCEMASAYVRSK--------GAGFENVFQLYGGIQRYLEQFPDGGFFKGKNFV 262 (608)
Q Consensus 203 ~~k~k~Iv~yCt-gGiR~~~a~~~L~~~--------~~Gf~nV~~L~GGi~~w~~~~~~~~~~~G~~fV 262 (608)
..+.+.||+||. ++.|+..++..|++. ..||++||.|+||+.+|.+++|+ +.++.+||
T Consensus 87 ~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~yP~--lCe~~~y~ 153 (174)
T d1ymka1 87 LDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN--FCEPQDYR 153 (174)
T ss_dssp --CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG--GEESSCCC
T ss_pred hccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHhCch--hcccCCcc
Confidence 245567999996 678999999999752 24999999999999999999875 66766776
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.52 E-value=7.6e-14 Score=141.66 Aligned_cols=165 Identities=17% Similarity=0.189 Sum_probs=111.9
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+.++++||++||++.+...|. .+++.|. .++.++.+|.+- + .+ .....
T Consensus 29 ~~~~~~Vvi~HG~~~~~~~~~----~~a~~L~~~G~~Vi~~D~rG--------h-----~G-------------~S~g~- 77 (302)
T d1thta_ 29 PFKNNTILIASGFARRMDHFA----GLAEYLSTNGFHVFRYDSLH--------H-----VG-------------LSSGS- 77 (302)
T ss_dssp CCCSCEEEEECTTCGGGGGGH----HHHHHHHTTTCCEEEECCCB--------C-----C--------------------
T ss_pred CCCCCEEEEeCCCcchHHHHH----HHHHHHHHCCCEEEEecCCC--------C-----CC-------------CCCCc-
Confidence 355789999999999999888 7888876 479999999771 1 00 00000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
+....+.....++...+++ +...+ ...+|+|+||||.+|+.+|. ..+++++
T Consensus 78 -----------------~~~~~~~~~~~dl~~vi~~----l~~~~~~~i~lvG~SmGG~ial~~A~-------~~~v~~l 129 (302)
T d1thta_ 78 -----------------IDEFTMTTGKNSLCTVYHW----LQTKGTQNIGLIAASLSARVAYEVIS-------DLELSFL 129 (302)
T ss_dssp -------------------CCCHHHHHHHHHHHHHH----HHHTTCCCEEEEEETHHHHHHHHHTT-------TSCCSEE
T ss_pred -----------------ccCCCHHHHHHHHHHHHHh----hhccCCceeEEEEEchHHHHHHHHhc-------cccccee
Confidence 0000000112233333333 33332 34689999999999988875 4568999
Q ss_pred EEecCCCCCccc-------------------------------------------------cccCCCCCCEEEEEcCCCC
Q 007311 527 ILCSGFALHSAE-------------------------------------------------FEHRSINCPSLHIFGGDLG 557 (608)
Q Consensus 527 IlisG~~~~~~~-------------------------------------------------~~~~~i~~PvL~i~G~~~~ 557 (608)
|+++|....... .....+++|+|++||+
T Consensus 130 i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~--- 206 (302)
T d1thta_ 130 ITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTAN--- 206 (302)
T ss_dssp EEESCCSCHHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEET---
T ss_pred EeecccccHHHHHHHHHhhccchhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeC---
Confidence 999887643210 1245789999999999
Q ss_pred CCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCChh
Q 007311 558 NDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTRSP 595 (608)
Q Consensus 558 ~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~ 595 (608)
+|.+||.+.++++++.++....+++...+ ||.+..+..
T Consensus 207 ~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~e~~~ 245 (302)
T d1thta_ 207 NDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLV 245 (302)
T ss_dssp TCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTTSSHH
T ss_pred CCCccCHHHHHHHHHhCCCCCceEEEecCCCcccccChH
Confidence 89999999999999998765566666655 999866543
|
| >d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: Dual specificity phosphatase Cdc25 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.52 E-value=2.1e-15 Score=134.81 Aligned_cols=103 Identities=12% Similarity=0.186 Sum_probs=78.5
Q ss_pred CCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhh-hcC
Q 007311 127 NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAE-QLQ 205 (608)
Q Consensus 127 ~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~-~~k 205 (608)
...++|+++|+.+++++ ++++|||||++.||+.|||+| +++.+...|.+ ++++..+ ..+
T Consensus 5 ~~v~~I~~~el~~~~~~-------------~~v~iIDvR~~~e~~~ghIpg----Ainip~~~~~~---~~~~~~~~~~~ 64 (132)
T d1t3ka_ 5 RSISYITSTQLLPLHRR-------------PNIAIIDVRDEERNYDGHIAG----SLHYASGSFDD---KISHLVQNVKD 64 (132)
T ss_dssp SSSEEECTTTTTTCCCC-------------TTEEEEEESCSHHHHSSCCCS----SEEECCSSSST---THHHHHHTCCS
T ss_pred cCCCEECHHHHHHHHhC-------------CCeEEEEccCHHHHHhccCcc----cceeeeecccc---ccccccccccc
Confidence 34578999999998865 579999999999999999999 66666444433 3333222 346
Q ss_pred CCeEEEEcCC-CccHHHHHHHHHhc------CCCCCcEEEcCccHHHHHHh
Q 007311 206 GKHVLMYCTG-GIRCEMASAYVRSK------GAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 206 ~k~Iv~yCtg-GiR~~~a~~~L~~~------~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.||+||.+ +.|+..++..|... ..||+|||.|+|||.+|.++
T Consensus 65 ~~~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~ 115 (132)
T d1t3ka_ 65 KDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEAS 115 (132)
T ss_dssp CCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHH
T ss_pred ccceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHc
Confidence 7889999975 45788877766531 25999999999999999987
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.52 E-value=3.5e-14 Score=138.30 Aligned_cols=174 Identities=16% Similarity=0.192 Sum_probs=115.8
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++.||||||++++...|...+.. .+..+++++.+|-| +.. ...+..
T Consensus 23 ~~~~~iv~lHG~~g~~~~~~~~~~~---~~~~~~~vi~~D~~--------G~G------------------~S~~~~--- 70 (290)
T d1mtza_ 23 EEKAKLMTMHGGPGMSHDYLLSLRD---MTKEGITVLFYDQF--------GCG------------------RSEEPD--- 70 (290)
T ss_dssp SCSEEEEEECCTTTCCSGGGGGGGG---GGGGTEEEEEECCT--------TST------------------TSCCCC---
T ss_pred CCCCeEEEECCCCCchHHHHHHHHH---HHHCCCEEEEEeCC--------CCc------------------cccccc---
Confidence 4467899999997777776633333 33457999999988 110 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. ....++..++.+.++++.. .....|+|||+||.+|+.+|.+. +..++++|
T Consensus 71 -----------------~-----~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lv 123 (290)
T d1mtza_ 71 -----------------Q-----SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKY-----QDHLKGLI 123 (290)
T ss_dssp -----------------G-----GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHH-----GGGEEEEE
T ss_pred -----------------c-----ccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcC-----hhhheeee
Confidence 0 0113445555666666553 34558999999999999999965 45689999
Q ss_pred EecCCCCCccc---------------------------------------------------------------------
Q 007311 528 LCSGFALHSAE--------------------------------------------------------------------- 538 (608)
Q Consensus 528 lisG~~~~~~~--------------------------------------------------------------------- 538 (608)
++++..+....
T Consensus 124 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (290)
T d1mtza_ 124 VSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYR 203 (290)
T ss_dssp EESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHH
T ss_pred ecccccCcccchhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhh
Confidence 98876532110
Q ss_pred --------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--h
Q 007311 539 --------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--P 595 (608)
Q Consensus 539 --------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~ 595 (608)
.....+++|+++++|+ +|.++| +.++++.+.+++ .+++.. ++||.+..+. .
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~---~D~~~~-~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~ 277 (290)
T d1mtza_ 204 IMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGE---YDEVTP-NVARVIHEKIAG--SELHVFRDCSHLTMWEDREG 277 (290)
T ss_dssp HHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEET---TCSSCH-HHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHH
T ss_pred hhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeC---CCCCCH-HHHHHHHHHCCC--CEEEEECCCCCchHHhCHHH
Confidence 0124578999999999 898765 667888888876 455555 5799875432 3
Q ss_pred hHHHHHHHHHHhC
Q 007311 596 YIDEIKSFLQRFL 608 (608)
Q Consensus 596 ~~~~i~~Fl~~~L 608 (608)
..+.|.+||.+.|
T Consensus 278 ~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 278 YNKLLSDFILKHL 290 (290)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhC
Confidence 6677888998765
|
| >d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Sulfurtransferase species: Azotobacter vinelandii [TaxId: 354]
Probab=99.50 E-value=2.5e-14 Score=128.51 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=78.5
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh--------ccccCCCCccccCccccc----------C
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR--------IGKFRTPSVETLDPEIRQ----------F 190 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~--------~Gh~~g~~~~~l~~~~~~----------~ 190 (608)
...+|.+++.+.|++ ++++|||||+..||. .|||+||. +.+... .
T Consensus 11 ~~~~s~d~l~~~l~~-------------~~~~liD~R~~~ey~G~~~~~~~~GhIPGAi----nip~~~~~~~~~~~~~~ 73 (136)
T d1e0ca2 11 EPTASRDYLLGRLGA-------------ADLAIWDARSPQEYRGEKVLAAKGGHIPGAV----NFEWTAAMDPSRALRIR 73 (136)
T ss_dssp TTBCCHHHHHHHTTC-------------TTEEEEECSCHHHHTTSSCCSSSCSBCTTCE----ECCGGGGEEGGGTTEEC
T ss_pred CceEcHHHHHHhhCC-------------CCeEEEECcChHHhcccccccccCCcchhHh----hhhhhhhhccccccchh
Confidence 457899999999865 689999999999995 79999953 333211 1
Q ss_pred CCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 191 SDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 191 ~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
.++.+.+.+ +...++++||+||.+|.|+..+...|+.. ||+||+.+.||+..|..
T Consensus 74 ~~l~~~~~~-~gi~~~~~vV~yC~~G~~a~~~~~~l~~~--G~~~v~~ydGg~~eW~~ 128 (136)
T d1e0ca2 74 TDIAGRLEE-LGITPDKEIVTHCQTHHRSGLTYLIAKAL--GYPRVKGYAGSWGEWGN 128 (136)
T ss_dssp TTHHHHHHH-TTCCTTSEEEEECSSSSHHHHHHHHHHHT--TCSCEEECSSHHHHHTT
T ss_pred HHHhhhhhh-cccCCCCceEEeCCChHHHHHHHHHHHHc--CCCCcEEecCCHHHHhc
Confidence 223333322 33478999999999999999999999886 99999999999999964
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.50 E-value=9.7e-14 Score=135.28 Aligned_cols=170 Identities=18% Similarity=0.208 Sum_probs=111.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||++.+...|...+..|. .++++++.+|.| ... . +..+ .
T Consensus 24 ~~illlHG~~~~~~~~~~~~~~l~---~~~~~vi~~D~~--------G~G------~-------S~~~-----~------ 68 (279)
T d1hkha_ 24 QPVVLIHGYPLDGHSWERQTRELL---AQGYRVITYDRR--------GFG------G-------SSKV-----N------ 68 (279)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCT--------TST------T-------SCCC-----S------
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEech--------hhC------C-------cccc-----c------
Confidence 569999999999999994443332 468999999987 110 0 0000 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
....++...+.+.++++..+ ....|+||||||.+++.++++. .+..+.++|++++
T Consensus 69 --------------------~~~~~~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~----~p~~v~~lvli~~ 124 (279)
T d1hkha_ 69 --------------------TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARY----GHERVAKLAFLAS 124 (279)
T ss_dssp --------------------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHH----CSTTEEEEEEESC
T ss_pred --------------------cccchhhhhhhhhhhhhhcCcCccccccccccccchhhhhccc----cccccceeEEeec
Confidence 01134555666777776654 4457999999976555544432 3567999999887
Q ss_pred CCCCccc-------------------------------------------------------------------------
Q 007311 532 FALHSAE------------------------------------------------------------------------- 538 (608)
Q Consensus 532 ~~~~~~~------------------------------------------------------------------------- 538 (608)
..+....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (279)
T d1hkha_ 125 LEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW 204 (279)
T ss_dssp CCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH
T ss_pred cCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhh
Confidence 6543210
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.....+++|+|+++|+ +|.+++.+ ..+.+.+.+++ .+++.. ++||.+..+.+ ..+.|.+||++
T Consensus 205 ~~~~~~~~~~~~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 205 IEDFRSDVEAVRAAGKPTLILHGT---KDNILPIDATARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp TCBCHHHHHHHHHHCCCEEEEEET---TCSSSCTTTTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred hcccccchhhhcccCCceEEEEcC---CCCccCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 0113468999999999 89999865 56778888776 455555 56998755432 55777888764
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.50 E-value=1.6e-13 Score=133.11 Aligned_cols=169 Identities=20% Similarity=0.220 Sum_probs=114.1
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.|||+||++.+...|. .+...| ..+++++.+|.| ... . + .. +
T Consensus 20 ~pvvllHG~~~~~~~~~----~~~~~l~~~~~~vi~~D~~--------G~G------~-------S-----~~---~--- 63 (273)
T d1a8sa_ 20 QPIVFSHGWPLNADSWE----SQMIFLAAQGYRVIAHDRR--------GHG------R-------S-----SQ---P--- 63 (273)
T ss_dssp SEEEEECCTTCCGGGGH----HHHHHHHHTTCEEEEECCT--------TST------T-------S-----CC---C---
T ss_pred CeEEEECCCCCCHHHHH----HHHHHHHhCCCEEEEEech--------hcC------c-------c-----cc---c---
Confidence 46899999999999999 555555 357999999988 110 0 0 00 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....+....+.+.+++...+ ....++|+|+||++++.++++. .+..++.+|+++
T Consensus 64 --------------------~~~~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~----~p~~v~~~~l~~ 119 (273)
T d1a8sa_ 64 --------------------WSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRH----GTARVAKAGLIS 119 (273)
T ss_dssp --------------------SSCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHH----CSTTEEEEEEES
T ss_pred --------------------cccccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhh----hhhccceeEEEe
Confidence 001234555666667776654 4457999999998887776643 256789999988
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+.++....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (273)
T d1a8sa_ 120 AVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKA 199 (273)
T ss_dssp CCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred cccccccccccccccchhhhhhhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHH
Confidence 76543210
Q ss_pred -------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHH
Q 007311 539 -------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 -------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+.++++...+.+. .++++. ++||.+..+. +..+.|.+||+
T Consensus 200 ~~~~~~~~~~~~i~~Pvlii~g~---~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 200 FSETDFTEDLKKIDVPTLVVHGD---ADQVVPIEASGIASAALVKG-STLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHCCCHHHHHTCCSCEEEEEET---TCSSSCSTTTHHHHHHHSTT-CEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHhhccceEEEecC---CCCCCCHHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 1235789999999999 89999988888776655433 555544 5699975532 25577777775
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.50 E-value=5.7e-14 Score=134.17 Aligned_cols=163 Identities=12% Similarity=0.109 Sum_probs=112.9
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||||||+++++..|. .|++.|+ .+.++.++.|- .
T Consensus 15 ~~~~~l~~lhg~~g~~~~~~----~la~~L~-~~~v~~~~~~g--------~---------------------------- 53 (230)
T d1jmkc_ 15 DQEQIIFAFPPVLGYGLMYQ----NLSSRLP-SYKLCAFDFIE--------E---------------------------- 53 (230)
T ss_dssp TCSEEEEEECCTTCCGGGGH----HHHHHCT-TEEEEEECCCC--------S----------------------------
T ss_pred CCCCeEEEEcCCCCCHHHHH----HHHHHCC-CCEEeccCcCC--------H----------------------------
Confidence 44578999999999999999 8999996 47888776550 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-C-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-G-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.++++.+.+.|.+. . ....|+|||+||.+|+.+|.+.+. ....+.+++
T Consensus 54 ----------------------------~~~a~~~~~~i~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~--~~~~v~~l~ 103 (230)
T d1jmkc_ 54 ----------------------------EDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEG--QGRIVQRII 103 (230)
T ss_dssp ----------------------------TTHHHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHH--TTCCEEEEE
T ss_pred ----------------------------HHHHHHHHHHHHHhCCCCcEEEEeeccChHHHHHHHHhhhh--hCccceeee
Confidence 00112222233332 1 223799999999999999988763 245677777
Q ss_pred EecCCCCCccc-----------------------------------------------cccCCCCCCEEEEEcCCCCCCc
Q 007311 528 LCSGFALHSAE-----------------------------------------------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 528 lisG~~~~~~~-----------------------------------------------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
.+.++.+.... .....+++|+++++|+ +|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~---~D~ 180 (230)
T d1jmkc_ 104 MVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSG---ADF 180 (230)
T ss_dssp EESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECS---SCC
T ss_pred cccccCccchhhhhhhhhhhhhhhhhhccccccccccHHHHHHHHHHHHHHHHhhhcccccccccCcceeeeec---CCc
Confidence 77766554321 2356889999999999 898
Q ss_pred ccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 561 QVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
.++.. ...+.+.+... .+++..++||....+++..+++.++|.++|
T Consensus 181 ~~~~~-~~~w~~~~~~~-~~~~~i~g~H~~ml~~~~~~~va~~I~~~L 226 (230)
T d1jmkc_ 181 DIPEW-LASWEEATTGA-YRMKRGFGTHAEMLQGETLDRNAGILLEFL 226 (230)
T ss_dssp CCCTT-EECSGGGBSSC-EEEEECSSCGGGTTSHHHHHHHHHHHHHHH
T ss_pred ccchh-HHHHHHhccCC-cEEEEEcCCChhhcCCccHHHHHHHHHHHH
Confidence 88743 33344444433 788888999986666677777777777664
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.50 E-value=1.6e-13 Score=138.03 Aligned_cols=171 Identities=18% Similarity=0.130 Sum_probs=120.8
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||+.+++..|. .....+..+++++.+|-| ++.+=+.+.
T Consensus 34 g~pvvllHG~~g~~~~~~----~~~~~l~~~~~Vi~~D~r-----------------------------G~G~S~~~~-- 78 (313)
T d1azwa_ 34 GKPVVMLHGGPGGGCNDK----MRRFHDPAKYRIVLFDQR-----------------------------GSGRSTPHA-- 78 (313)
T ss_dssp SEEEEEECSTTTTCCCGG----GGGGSCTTTEEEEEECCT-----------------------------TSTTSBSTT--
T ss_pred CCEEEEECCCCCCccchH----HHhHHhhcCCEEEEEecc-----------------------------ccCCCCccc--
Confidence 356899999998888887 444445678999999977 111100000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
. .....+....+.|..+++..+ ....|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 79 --------------~-----~~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lv~~~ 134 (313)
T d1azwa_ 79 --------------D-----LVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTH-----PQQVTELVLRG 134 (313)
T ss_dssp --------------C-----CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred --------------c-----ccchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHh-----hhceeeeeEec
Confidence 0 001235566677777777754 3457899999999999999954 46788899888
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
++.+....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (313)
T d1azwa_ 135 IFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFV 214 (313)
T ss_dssp CCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHH
T ss_pred cccccccchhhhhhcccchhhhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhh
Confidence 76543210
Q ss_pred ----------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE-E
Q 007311 539 ----------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII-E 583 (608)
Q Consensus 539 ----------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv-~ 583 (608)
.....+++|+|+++|+ +|.++|++.++++++.+++ .+++ .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~---~D~~~p~~~~~~l~~~~p~--a~~~~i 289 (313)
T d1azwa_ 215 TGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGR---YDVVCPLQSAWDLHKAWPK--AQLQIS 289 (313)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEET---TCSSSCHHHHHHHHHHCTT--SEEEEE
T ss_pred cccchhHHHHHHhHHHHHHHhhccccccchhhhHhhhhcCCCCEEEEEEC---CCCCCCHHHHHHHHHHCCC--CEEEEE
Confidence 0123467899999999 8999999999999999987 4444 4
Q ss_pred eCCCCcCCCChhhHHHHHHHHHHh
Q 007311 584 HDCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 584 ~~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
.++||.. .+++..++|.+.+.+|
T Consensus 290 ~~aGH~~-~ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 290 PASGHSA-FEPENVDALVRATDGF 312 (313)
T ss_dssp TTCCSST-TSHHHHHHHHHHHHHH
T ss_pred CCCCCCC-CCchHHHHHHHHHHHh
Confidence 4779974 4566788888888776
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=9.8e-14 Score=138.43 Aligned_cols=172 Identities=15% Similarity=0.112 Sum_probs=117.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.|.||||||++++...|...+..|.+ .+++++.+|.| ... . ..+-.
T Consensus 32 gp~vlllHG~~~~~~~~~~~~~~L~~---~g~~vi~~D~~--------G~G------~------------S~~~~----- 77 (322)
T d1zd3a2 32 GPAVCLCHGFPESWYSWRYQIPALAQ---AGYRVLAMDMK--------GYG------E------------SSAPP----- 77 (322)
T ss_dssp SSEEEEECCTTCCGGGGTTHHHHHHH---TTCEEEEEECT--------TST------T------------SCCCS-----
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHH---CCCEEEEeccc--------ccc------c------------ccccc-----
Confidence 36799999999999999944444433 36999999988 110 0 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
. .....++...+.+.++++..+ ....|+|||+||.+|+.+|.++ +..++++|+++
T Consensus 78 --------------~-----~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~ 133 (322)
T d1zd3a2 78 --------------E-----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFY-----PERVRAVASLN 133 (322)
T ss_dssp --------------C-----GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEES
T ss_pred --------------c-----cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhC-----CccccceEEEc
Confidence 0 001234555566666666654 4457999999999999999854 56788999887
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+.......
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (322)
T d1zd3a2 134 TPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLS 213 (322)
T ss_dssp CCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCC
T ss_pred ccccccccccchhhhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhh
Confidence 53211000
Q ss_pred ---------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc
Q 007311 539 ---------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS 579 (608)
Q Consensus 539 ---------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~ 579 (608)
.....+++|+|+++|+ +|.+++.+..+++++.+++ .
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~---~D~~~~~~~~~~~~~~~~~--~ 288 (322)
T d1zd3a2 214 RMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAE---KDFVLVPQMSQHMEDWIPH--L 288 (322)
T ss_dssp TTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEET---TCSSSCGGGGTTGGGTCTT--C
T ss_pred hhccHHHHHHHHHHHhhcccccccccccccccccccchhhhcccCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--C
Confidence 0125678999999999 8999999999888888876 4
Q ss_pred EEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 580 VIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 580 ~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
.+++. ++||.++.+. ++.+.|.+||++
T Consensus 289 ~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~ 318 (322)
T d1zd3a2 289 KRGHIEDCGHWTQMDKPTEVNQILIKWLDS 318 (322)
T ss_dssp EEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHhCHHHHHHHHHHHHhh
Confidence 44444 5699976542 256778888875
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.47 E-value=3.5e-13 Score=131.77 Aligned_cols=172 Identities=16% Similarity=0.090 Sum_probs=120.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++++...|. .+...|..+++++.+|-| ... ...+...
T Consensus 34 g~pvvllHG~~~~~~~w~----~~~~~l~~~~~vi~~D~r--------G~G------------------~S~~~~~---- 79 (313)
T d1wm1a_ 34 GKPAVFIHGGPGGGISPH----HRQLFDPERYKVLLFDQR--------GCG------------------RSRPHAS---- 79 (313)
T ss_dssp SEEEEEECCTTTCCCCGG----GGGGSCTTTEEEEEECCT--------TST------------------TCBSTTC----
T ss_pred CCeEEEECCCCCcccchH----HHHHHhhcCCEEEEEeCC--------Ccc------------------ccccccc----
Confidence 356999999999999998 555667788999999988 110 0000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
..........+.+...+...+ ....++|+|+||.+++.+|... +..+..+|+++
T Consensus 80 --------------------~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~-----~~~v~~~v~~~ 134 (313)
T d1wm1a_ 80 --------------------LDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTH-----PERVSEMVLRG 134 (313)
T ss_dssp --------------------CTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEES
T ss_pred --------------------ccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHH-----hhhheeeeecc
Confidence 001224445555556666554 4457999999999999999854 45678888877
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
........
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (313)
T d1wm1a_ 135 IFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESA 214 (313)
T ss_dssp CCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGG
T ss_pred cccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhh
Confidence 65432100
Q ss_pred ---------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-
Q 007311 539 ---------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH- 584 (608)
Q Consensus 539 ---------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~- 584 (608)
.....+++|||+|||+ +|.++|.+.++++++.+++ .++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~---~D~~~p~~~~~~l~~~~p~--a~~~~i~ 289 (313)
T d1wm1a_ 215 SFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGR---YDMACQVQNAWDLAKAWPE--AELHIVE 289 (313)
T ss_dssp GGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEET---TCSSSCHHHHHHHHHHCTT--SEEEEET
T ss_pred hhhhhhHHhhhhhhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEEC---CCCccCHHHHHHHHHHCCC--CEEEEEC
Confidence 0122468999999999 8999999999999999987 455444
Q ss_pred CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 585 DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 585 ~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++||.+ .+++..+++.+++.+|.
T Consensus 290 ~aGH~~-~eP~~~~~lv~a~~~f~ 312 (313)
T d1wm1a_ 290 GAGHSY-DEPGILHQLMIATDRFA 312 (313)
T ss_dssp TCCSST-TSHHHHHHHHHHHHHHT
T ss_pred CCCCCc-CCchHHHHHHHHHHHhc
Confidence 569975 34667788988888873
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.47 E-value=1.6e-13 Score=133.62 Aligned_cols=173 Identities=13% Similarity=0.115 Sum_probs=114.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++||||||++++...|. .+...|.+.+++|.+|.| +.. ...+.....
T Consensus 28 g~~vvllHG~~~~~~~~~----~~~~~L~~~~~vi~~Dl~--------G~G------------------~S~~~~~~~-- 75 (298)
T d1mj5a_ 28 GDPILFQHGNPTSSYLWR----NIMPHCAGLGRLIACDLI--------GMG------------------DSDKLDPSG-- 75 (298)
T ss_dssp SSEEEEECCTTCCGGGGT----TTGGGGTTSSEEEEECCT--------TST------------------TSCCCSSCS--
T ss_pred CCcEEEECCCCCCHHHHH----HHHHHHhcCCEEEEEeCC--------CCC------------------CCCCCcccc--
Confidence 357999999999999999 677777778999999988 110 000000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
..........+.+...+.+. .....|+|||+||.+|+.++.++ +..+.+++++
T Consensus 76 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~l~~~ 130 (298)
T d1mj5a_ 76 --------------------PERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRH-----RERVQGIAYM 130 (298)
T ss_dssp --------------------TTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHT-----GGGEEEEEEE
T ss_pred --------------------ccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHH-----Hhhhheeecc
Confidence 00111223333344444332 23457999999999999999965 4568888887
Q ss_pred cCCCCCccc-----------------------------------------------------------------------
Q 007311 530 SGFALHSAE----------------------------------------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~~~----------------------------------------------------------------------- 538 (608)
.+.......
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (298)
T d1mj5a_ 131 EAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQI 210 (298)
T ss_dssp EECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGS
T ss_pred ccccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhh
Confidence 655432110
Q ss_pred -----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHH
Q 007311 539 -----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDE 599 (608)
Q Consensus 539 -----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~ 599 (608)
.....+++|+|+++|+ +|.+.+ ...+++.+.+++ ..++..++||.++.+.+ ..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~---~d~~~~-~~~~~~~~~~p~--~~~~~~~~GH~~~~e~P~~v~~~ 284 (298)
T d1mj5a_ 211 PIAGTPADVVAIARDYAGWLSESPIPKLFINAE---PGALTT-GRMRDFCRTWPN--QTEITVAGAHFIQEDSPDEIGAA 284 (298)
T ss_dssp CBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEE---ECSSSS-HHHHHHHTTCSS--EEEEEEEESSCGGGTCHHHHHHH
T ss_pred hhcchhhhhhhhhhhhhhhhhhcceeEEEEecC---CCCcCh-HHHHHHHHHCCC--CEEEEeCCCCchHHhCHHHHHHH
Confidence 0124678999999999 787654 566777777765 55666688999877643 6788
Q ss_pred HHHHHHHh
Q 007311 600 IKSFLQRF 607 (608)
Q Consensus 600 i~~Fl~~~ 607 (608)
|.+||++.
T Consensus 285 i~~fl~~~ 292 (298)
T d1mj5a_ 285 IAAFVRRL 292 (298)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 88998763
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.46 E-value=8.8e-13 Score=137.08 Aligned_cols=174 Identities=16% Similarity=0.134 Sum_probs=116.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|+||++||++++.+.+. .+...|. .++.++.+|.|- .. . ...+..
T Consensus 129 ~~~P~Vi~~hG~~~~~e~~~----~~~~~l~~~G~~vl~~D~~G--------~G------~-----------s~~~~~-- 177 (360)
T d2jbwa1 129 GPHPAVIMLGGLESTKEESF----QMENLVLDRGMATATFDGPG--------QG------E-----------MFEYKR-- 177 (360)
T ss_dssp CCEEEEEEECCSSCCTTTTH----HHHHHHHHTTCEEEEECCTT--------SG------G-----------GTTTCC--
T ss_pred CCceEEEEeCCCCccHHHHH----HHHHHHHhcCCEEEEEcccc--------cc------c-----------cCcccc--
Confidence 45689999999999998877 4444443 589999999881 00 0 000000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
...+++.....+.+.+.... ..++|+|+||||.+|+.+|.. .++++
T Consensus 178 ------------------------~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~------~pri~ 227 (360)
T d2jbwa1 178 ------------------------IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC------EPRLA 227 (360)
T ss_dssp ------------------------SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH------CTTCC
T ss_pred ------------------------ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhc------CCCcc
Confidence 01122223333334443332 345799999999999999874 34689
Q ss_pred EEEEecCCCCCccc----------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHH
Q 007311 525 FAILCSGFALHSAE----------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKEL 570 (608)
Q Consensus 525 ~vIlisG~~~~~~~----------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l 570 (608)
++|.++|+...... ....+|++|+|++||+ +|. ||.+.++++
T Consensus 228 a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~---~D~-vp~~~~~~l 303 (360)
T d2jbwa1 228 ACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGV---HDE-VPLSFVDTV 303 (360)
T ss_dssp EEEEESCCSCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEET---TSS-SCTHHHHHH
T ss_pred eEEEEcccccHHHHhhhhhhhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeC---CCC-cCHHHHHHH
Confidence 99999987644210 1246889999999999 897 699999999
Q ss_pred HHHhccCCcEEEEe-CCCCcCC-CChhhHHHHHHHHHHhC
Q 007311 571 AKAFEEGCSVIIEH-DCGHIIP-TRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 571 ~~~~~~~~~~vv~~-~gGH~ip-~~~~~~~~i~~Fl~~~L 608 (608)
++.+.....+++.. +++|... ........+.+||.+.|
T Consensus 304 ~~~~~~~~~~l~~~~~g~H~~~~~~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 304 LELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVL 343 (360)
T ss_dssp HHHSCGGGEEEEEETTCCGGGGGGTTHHHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEEEECCCCcCCCcChHHHHHHHHHHHHHHh
Confidence 99987654566555 5678532 22346678899998764
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.46 E-value=4.1e-13 Score=129.47 Aligned_cols=169 Identities=17% Similarity=0.208 Sum_probs=111.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++|||+||++++...|. .+.+.|. .+++++.+|.|- .. .=+.+
T Consensus 20 ~~vv~lHG~~~~~~~~~----~~~~~l~~~g~~vi~~D~~G--------~G---------------------~S~~~--- 63 (271)
T d1va4a_ 20 KPVLFSHGWLLDADMWE----YQMEYLSSRGYRTIAFDRRG--------FG---------------------RSDQP--- 63 (271)
T ss_dssp SEEEEECCTTCCGGGGH----HHHHHHHTTTCEEEEECCTT--------ST---------------------TSCCC---
T ss_pred CeEEEECCCCCCHHHHH----HHHHHHHhCCCEEEEEeccc--------cc---------------------ccccc---
Confidence 46899999999999999 5555554 479999999881 10 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
. ....++...+.+.+++...+ ....++|+|+||++++.+++.. .+..+.++|+++
T Consensus 64 -------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~----~p~~v~~~v~~~ 119 (271)
T d1va4a_ 64 -------------W-------TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARH----GSARVAGLVLLG 119 (271)
T ss_dssp -------------S-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHH----CSTTEEEEEEES
T ss_pred -------------c-------cccccccccccceeeeeecCCCcceeecccccccccccccccc----ccceeeEEEeec
Confidence 0 01234555566666666654 4457899999988777665543 356788999887
Q ss_pred CCCCCccc------------------------------------------------------------------------
Q 007311 531 GFALHSAE------------------------------------------------------------------------ 538 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------------------------------ 538 (608)
+..+....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (271)
T d1va4a_ 120 AVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFA 199 (271)
T ss_dssp CCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccc
Confidence 66543210
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHH-HHhccCCcEEEEe-CCCCcCCCCh--hhHHHHHHHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASKELA-KAFEEGCSVIIEH-DCGHIIPTRS--PYIDEIKSFLQR 606 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~-~~~~~~~~~vv~~-~gGH~ip~~~--~~~~~i~~Fl~~ 606 (608)
....++++|+++++|+ +|.++|.+.+.++. +.+++ .++++. ++||.++.+. ...+.|.+||++
T Consensus 200 ~~~~~~~l~~i~~Pvl~i~g~---~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 200 ETDFRPDMAKIDVPTLVIHGD---GDQIVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HCCCHHHHHHCCSCEEEEEET---TCSSSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred hhhhhhhhhhcccceeecccC---CCCCCCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 1234678999999999 89999988887765 45554 555555 5699875432 256777788763
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.45 E-value=1.7e-13 Score=137.64 Aligned_cols=177 Identities=14% Similarity=0.156 Sum_probs=124.2
Q ss_pred CCccEEEEecCC--CCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGF--RQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~--G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..+++|+|+||+ |+++..|. .|++.|....+++.+|.| |..+ ....
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~----~la~~L~~~~~V~al~~pG~~~~---------------------------~~~~ 106 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFL----RLSTSFQEERDFLAVPLPGYGTG---------------------------TGTG 106 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTH----HHHHTTTTTCCEEEECCTTCCBC------------------------------C
T ss_pred CCCceEEEeCCCCCCCCHHHHH----HHHHhcCCCceEEEEeCCCCCCC---------------------------CCCc
Confidence 456789999995 57788899 999999998999999998 1100 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
+ .....++++..+.+.+.|.. .+|+ .|+|||+||.+|+.+|.++++.. ...+
T Consensus 107 -------------------~----~~~~~s~~~~a~~~~~~i~~~~~~~P~-vL~GhS~GG~vA~e~A~~l~~~~-g~~v 161 (283)
T d2h7xa1 107 -------------------T----ALLPADLDTALDAQARAILRAAGDAPV-VLLGHSGGALLAHELAFRLERAH-GAPP 161 (283)
T ss_dssp -------------------B----CCEESSHHHHHHHHHHHHHHHHTTSCE-EEEEETHHHHHHHHHHHHHHHHH-SCCC
T ss_pred -------------------c----ccccCCHHHHHHHHHHHHHHhcCCCce-EEEEeccchHHHHHHHHhhHHHc-CCCc
Confidence 0 00123567777766554433 2455 89999999999999998775322 4578
Q ss_pred cEEEEecCCCCCccc--------------------------------------cccCCCCCCEEEEEcCCCCCCcccchH
Q 007311 524 RFAILCSGFALHSAE--------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQ 565 (608)
Q Consensus 524 ~~vIlisG~~~~~~~--------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~ 565 (608)
.++|++.++.+.... .....+++|+++++|+ +|..++.+
T Consensus 162 ~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~---~d~~~~~~ 238 (283)
T d2h7xa1 162 AGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRAS---EPLGDWQE 238 (283)
T ss_dssp SEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEES---SCSSCCCG
T ss_pred eEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHHHHHHhhccccccCCCeEEEEeC---CCCCCCHH
Confidence 899999887765431 1346789999999999 89888877
Q ss_pred HHHHHHHHhccCCcEEEEeCCCCc-CCCC-h-hhHHHHHHHHHH
Q 007311 566 ASKELAKAFEEGCSVIIEHDCGHI-IPTR-S-PYIDEIKSFLQR 606 (608)
Q Consensus 566 ~~~~l~~~~~~~~~~vv~~~gGH~-ip~~-~-~~~~~i~~Fl~~ 606 (608)
....+.+.+... .+++..+|||+ +..+ + ...+.|.+||..
T Consensus 239 ~~~~w~~~~~~~-~~~~~v~G~H~~ml~e~~~~vA~~i~~~L~~ 281 (283)
T d2h7xa1 239 ERGDWRAHWDLP-HTVADVPGDHFTMMRDHAPAVAEAVLSWLDA 281 (283)
T ss_dssp GGCCCSCCCSSC-SEEEEESSCTTHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-cEEEEEcCCCcccccCCHHHHHHHHHHHHHh
Confidence 777676665543 67888899997 3222 2 245677888764
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.44 E-value=6.6e-13 Score=128.71 Aligned_cols=169 Identities=15% Similarity=0.158 Sum_probs=110.1
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.++|||+||+++++..|...+..|. ..+++++.+|.| ... . ... +
T Consensus 21 ~~~vv~lHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~--------G~G------~------------s~~---~--- 65 (275)
T d1a88a_ 21 GLPVVFHHGWPLSADDWDNQMLFFL---SHGYRVIAHDRR--------GHG------R------------SDQ---P--- 65 (275)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCT--------TST------T------------SCC---C---
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEecc--------ccc------c------------ccc---c---
Confidence 3579999999999999994444443 357999999988 100 0 000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChh-HHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQG-AAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQG-a~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....++...+.+.++++..+ ....++|+|+| |.+++.+|. ..+..++++|++
T Consensus 66 --------------------~~~~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~-----~~p~~v~~lvl~ 120 (275)
T d1a88a_ 66 --------------------STGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVAR-----AEPGRVAKAVLV 120 (275)
T ss_dssp --------------------SSCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHH-----SCTTSEEEEEEE
T ss_pred --------------------cccccccccccccccccccccccccccccccccccchhhcccc-----cCcchhhhhhhh
Confidence 001234455566666666654 34467888875 455555665 336779999999
Q ss_pred cCCCCCccc-----------------------------------------------------------------------
Q 007311 530 SGFALHSAE----------------------------------------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~~~----------------------------------------------------------------------- 538 (608)
++..+....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (275)
T d1a88a_ 121 SAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIA 200 (275)
T ss_dssp SCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred cccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 876543210
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhccCCcEEEEeC-CCCcCCCCh--hhHHHHHHHHH
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEGCSVIIEHD-CGHIIPTRS--PYIDEIKSFLQ 605 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~~~~vv~~~-gGH~ip~~~--~~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|+++|.+. .+.+.+.+++ .++++.+ +||.+..+. ...+.|.+||+
T Consensus 201 ~~~~~~~~~~l~~i~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 201 AFSETDFTDDLKRIDVPVLVAHGT---DDQVVPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHHCCCHHHHHHCCSCEEEEEET---TCSSSCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HhhhhhhhHHHHhhccccceeecC---CCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 1134589999999999 899998755 4566677765 5666665 699875532 25677788876
|
| >d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Sulfurtransferase species: Azotobacter vinelandii [TaxId: 354]
Probab=99.43 E-value=6.5e-14 Score=124.81 Aligned_cols=101 Identities=13% Similarity=0.166 Sum_probs=72.3
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCC--C--------chHHHH-
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS--D--------LPTWID- 198 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~--~--------~~~~~~- 198 (608)
.-|+++|++++|++ ++++|||||+..||+.|||+|+. +.+...+. . ....+.
T Consensus 9 ~lIs~~el~~~l~~-------------~~~viiDvR~~~ey~~gHIpgA~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (135)
T d1e0ca1 9 LVIEPADLQARLSA-------------PELILVDLTSAARYAEGHIPGAR----FVDPKRTQLGQPPAPGLQPPREQLES 71 (135)
T ss_dssp SEECHHHHHTTTTC-------------TTEEEEECSCHHHHHHCBSTTCE----ECCGGGGSCCCTTCTTSCCCHHHHHH
T ss_pred cEeeHHHHHHHhcC-------------CCeEEEECCCHHHHhcccCcccc----ccchhhhhhcccccchhhcchhhhhh
Confidence 45799999999965 58999999999999999999954 22211111 0 111111
Q ss_pred --hhhhhcCCCeEEEE-cCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 199 --NNAEQLQGKHVLMY-CTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 199 --~~~~~~k~k~Iv~y-CtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.......+..+++| |.+|.++.++...|+.. ||+||+.|.|||.+|.++
T Consensus 72 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~--G~~~V~~l~GG~~~W~~~ 123 (135)
T d1e0ca1 72 LFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVI--GQQRYHYLNGGLTAWLAE 123 (135)
T ss_dssp HHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHT--TCCCEEEETTHHHHHHHT
T ss_pred hhccccccccccccccccccCccchhhHHHHHhc--cCCCEEEecChHHHHHHC
Confidence 11122445566666 46778888888888886 999999999999999875
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.42 E-value=1.4e-12 Score=130.17 Aligned_cols=195 Identities=13% Similarity=0.046 Sum_probs=117.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.+.|.||++||++++...|..+...|++ .++.++.+|.+- .. . +. .+.... ....|..
T Consensus 80 ~~~P~vv~~HG~~~~~~~~~~~~~~la~---~Gy~vi~~D~rG--------~G---~-s~--~~~~~~--~~~~~~~--- 137 (318)
T d1l7aa_ 80 GPHPAIVKYHGYNASYDGEIHEMVNWAL---HGYATFGMLVRG--------QQ---R-SE--DTSISP--HGHALGW--- 137 (318)
T ss_dssp SCEEEEEEECCTTCCSGGGHHHHHHHHH---TTCEEEEECCTT--------TS---S-SC--CCCCCS--SCCSSSS---
T ss_pred CCceEEEEecCCCCCccchHHHHHHHHH---CCCEEEEEeeCC--------CC---C-CC--CCcccc--hhhhhcc---
Confidence 4568999999999999999966666654 489999999871 11 0 00 000000 0011111
Q ss_pred CCCccccccccCCCCCCCccc--ccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQY--QQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~--~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
| .....+.... .....+...+.+++...-.......++.|+|+||.+++.++... ..+++++
T Consensus 138 --------~--~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~------~~~~~~~ 201 (318)
T d1l7aa_ 138 --------M--TKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALS------DIPKAAV 201 (318)
T ss_dssp --------T--TTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHC------SCCSEEE
T ss_pred --------h--hhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcC------cccceEE
Confidence 0 0000111000 00111122222222111101123346899999999999888753 3566666
Q ss_pred EecCCCCCccc---------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHH
Q 007311 528 LCSGFALHSAE---------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASK 568 (608)
Q Consensus 528 lisG~~~~~~~---------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~ 568 (608)
...++...... ....+|++|+|++||+ +|.+||.+.++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~---~D~~vp~~~~~ 278 (318)
T d1l7aa_ 202 ADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGL---IDKVTPPSTVF 278 (318)
T ss_dssp EESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEET---TCSSSCHHHHH
T ss_pred EeccccccHHHHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEEC---CCCCcCHHHHH
Confidence 65544322100 1245789999999999 89999999999
Q ss_pred HHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 569 ELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 569 ~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++++.+... .+++.+ ++||.++ ++..+++.+||.++|
T Consensus 279 ~~~~~l~~~-~~l~~~~~~gH~~~--~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 279 AAYNHLETK-KELKVYRYFGHEYI--PAFQTEKLAFFKQIL 316 (318)
T ss_dssp HHHHHCCSS-EEEEEETTCCSSCC--HHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC-cEEEEECCCCCCCc--HHHHHHHHHHHHHhC
Confidence 999988754 666666 5699875 478899999999875
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.42 E-value=2.8e-12 Score=124.10 Aligned_cols=120 Identities=19% Similarity=0.194 Sum_probs=86.0
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcC
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~ 554 (608)
+++...++++.+.. ......++|||+||.+|+.+|... +++++|+++...... ......+.+|+|+|||+
T Consensus 93 ~D~~a~~~~~~~~~--~~~~v~l~G~S~Gg~va~~~a~~~-------~~~~lil~ap~~~~~-~~~~~~~~~P~Lvi~G~ 162 (218)
T d2fuka1 93 DDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL-------EPQVLISIAPPAGRW-DFSDVQPPAQWLVIQGD 162 (218)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH-------CCSEEEEESCCBTTB-CCTTCCCCSSEEEEEET
T ss_pred HHHHHHHHHHhhcc--cCceEEEEEEcccchhhhhhhccc-------ccceEEEeCCcccch-hhhccccccceeeEecC
Confidence 34555555554431 134558899999999999888743 467899988654322 22345778999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh-hHHHHHHHHHHhC
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP-YIDEIKSFLQRFL 608 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~-~~~~i~~Fl~~~L 608 (608)
+|.++|.+.++++++.+... .+++.. +++|.+....+ ..+.+.+|+++.|
T Consensus 163 ---~D~~vp~~~~~~l~~~~~~~-~~l~~i~ga~H~f~~~~~~l~~~~~~~v~~~l 214 (218)
T d2fuka1 163 ---ADEIVDPQAVYDWLETLEQQ-PTLVRMPDTSHFFHRKLIDLRGALQHGVRRWL 214 (218)
T ss_dssp ---TCSSSCHHHHHHHHTTCSSC-CEEEEETTCCTTCTTCHHHHHHHHHHHHGGGC
T ss_pred ---CCcCcCHHHHHHHHHHccCC-ceEEEeCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence 89999999999998877765 555545 56999866533 5677888888765
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.40 E-value=1.6e-12 Score=123.48 Aligned_cols=38 Identities=16% Similarity=0.352 Sum_probs=32.6
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAP 411 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP 411 (608)
..+|+||||||+++++..|. .+.+.|. .+++++.+|.|
T Consensus 14 ~~~P~ivllHG~~~~~~~~~----~~~~~L~~~g~~vi~~Dl~ 52 (264)
T d1r3da_ 14 ARTPLVVLVHGLLGSGADWQ----PVLSHLARTQCAALTLDLP 52 (264)
T ss_dssp TTBCEEEEECCTTCCGGGGH----HHHHHHTTSSCEEEEECCT
T ss_pred CCCCeEEEeCCCCCCHHHHH----HHHHHHHhCCCEEEEEecc
Confidence 34578999999999999999 7777775 47999999988
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.39 E-value=8.8e-13 Score=134.18 Aligned_cols=61 Identities=16% Similarity=0.130 Sum_probs=46.6
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE-EEeCCCCc---CCCC--hhhHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI-IEHDCGHI---IPTR--SPYIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v-v~~~gGH~---ip~~--~~~~~~i~~Fl~~ 606 (608)
..|++|+|+++|+ +|.+++.+.++++.+.+++. ..+ +..+.||. +..+ +....+|.+||++
T Consensus 310 ~~i~vPvL~i~G~---~D~~~~~~~~~~l~~~lp~~-~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 310 TDMHVPIAVWNGG---NDLLADPHDVDLLLSKLPNL-IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp GGCCSCEEEEEET---TCSSSCHHHHHHHHTTCTTE-EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred hhCCCCEEEEEeC---CCCccCHHHHHHHHHHCCCC-eEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 4578999999999 89999999999999988764 343 44566996 3333 2357889999874
|
| >d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Rhodanese species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.33 E-value=1.5e-12 Score=117.72 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=79.4
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh------------ccccCCCCccccCcccccC------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR------------IGKFRTPSVETLDPEIRQF------ 190 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~------------~Gh~~g~~~~~l~~~~~~~------ 190 (608)
..-++.+|+.+.+++ ++++|||+|+..||. .|||+|+ ++.+...+
T Consensus 10 ~~i~~~~ev~~~l~~-------------~~~~iiD~R~~~ef~G~~~~~~~~~~~~GhIpgA----~~ip~~~~~~~~~~ 72 (144)
T d1rhsa2 10 SLLKTYEQVLENLES-------------KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGS----VNMPFMNFLTEDGF 72 (144)
T ss_dssp GGEECHHHHHHHHHH-------------CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTC----EECCGGGGBCTTSC
T ss_pred HHeecHHHHHHHhcC-------------CCcEEEECCCCHHHcCCCCCCccccceeeehhhh----hhcchhhhhhhhcc
Confidence 345689999999987 589999999999995 7999995 33332221
Q ss_pred CCchHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 191 SDLPTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 191 ~~~~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
-..++.+.+.. ...++++||+||.+|+|+..+.-.|+.. ||+||..+.||+..|...
T Consensus 73 ~~~~~~l~~~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~l--G~~~v~~YdGsw~eW~~~ 132 (144)
T d1rhsa2 73 EKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLC--GKPDVAIYDGSWFEWFHR 132 (144)
T ss_dssp BCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHT--TCCCCEEESSHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCCCEEEEecccchHHHHHHHHHHc--CCCCCEEeCCCHHHHhhc
Confidence 11244444332 3468899999999999999999999876 999999999999999875
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.31 E-value=8.4e-12 Score=123.49 Aligned_cols=170 Identities=19% Similarity=0.208 Sum_probs=116.4
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|.||++||++++.+.+. .+++.|. .++.++.+|.+-. .+..
T Consensus 50 g~~P~Vv~~HG~~g~~~~~~----~~a~~lA~~Gy~V~~~d~~~~-----------------------------~~~~-- 94 (260)
T d1jfra_ 50 GTFGAVVISPGFTAYQSSIA----WLGPRLASQGFVVFTIDTNTT-----------------------------LDQP-- 94 (260)
T ss_dssp CCEEEEEEECCTTCCGGGTT----THHHHHHTTTCEEEEECCSST-----------------------------TCCH--
T ss_pred CCccEEEEECCCCCCHHHHH----HHHHHHHhCCCEEEEEeeCCC-----------------------------cCCc--
Confidence 34588999999999999888 5666665 5888888875510 0000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
.....++..++++|.+.....+ ..++++|||+||.+++.++.. ..+++
T Consensus 95 ----------------------~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~------~~~~~ 146 (260)
T d1jfra_ 95 ----------------------DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKS------RTSLK 146 (260)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHH------CTTCS
T ss_pred ----------------------hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhh------hccch
Confidence 0112345556666655433322 345799999999999998874 35688
Q ss_pred EEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHH-HHHHHHHhccC-CcEEEE-eCCCCcCCCC--hhhHHH
Q 007311 525 FAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQA-SKELAKAFEEG-CSVIIE-HDCGHIIPTR--SPYIDE 599 (608)
Q Consensus 525 ~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-~~~l~~~~~~~-~~~vv~-~~gGH~ip~~--~~~~~~ 599 (608)
.+|.++++.+.. ....+++|+|++||+ +|.++|.+. .+.+++.+... ...+++ .+++|.+... ......
T Consensus 147 A~v~~~~~~~~~---~~~~~~~P~l~i~G~---~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~ 220 (260)
T d1jfra_ 147 AAIPLTGWNTDK---TWPELRTPTLVVGAD---GDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKY 220 (260)
T ss_dssp EEEEESCCCSCC---CCTTCCSCEEEEEET---TCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHH
T ss_pred hheeeecccccc---cccccccceeEEecC---CCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHH
Confidence 999999887654 356789999999999 899999865 55566666543 244444 4569986443 345667
Q ss_pred HHHHHHHhC
Q 007311 600 IKSFLQRFL 608 (608)
Q Consensus 600 i~~Fl~~~L 608 (608)
+..||+.+|
T Consensus 221 ~~~wl~~~L 229 (260)
T d1jfra_ 221 SISWLKRFI 229 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 889998764
|
| >d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: 3-mercaptopyruvate sulfurtransferase species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=1.8e-12 Score=113.24 Aligned_cols=101 Identities=11% Similarity=0.084 Sum_probs=73.2
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh-----------ccccCCCCccccCccc-ccCCCchHHHH
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR-----------IGKFRTPSVETLDPEI-RQFSDLPTWID 198 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~-~~~~~~~~~~~ 198 (608)
.++.+|+...+++ ++++|||+|+..||. .|||+++......... ......++.+.
T Consensus 5 ~~~~~ev~~~~~~-------------~~~~liD~R~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~~~~~~~~~~~~ 71 (120)
T d1urha2 5 VVKVTDVLLASHE-------------NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELD 71 (120)
T ss_dssp BCCHHHHHHHHHH-------------TCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHH
T ss_pred HccHHHHHHHhhC-------------CCcEEEeCCCHHHcCcccCCcccccccccccccchhchhhcccccccCCHHHhh
Confidence 4678888888876 589999999999995 7899885322211100 11111122333
Q ss_pred hh---hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHH
Q 007311 199 NN---AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRY 246 (608)
Q Consensus 199 ~~---~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w 246 (608)
+. ....++++||+||.+|+|+..+...|+.. ||+||+.+.||+..|
T Consensus 72 ~~~~~~g~~~~~~ii~yC~sG~~A~~~~~~L~~l--G~~~v~~y~Gs~~eW 120 (120)
T d1urha2 72 AIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATL--DVPNVKLYDGAWSEW 120 (120)
T ss_dssp HHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHT--TCSSCEEECCSCCC-
T ss_pred hhhhhcccCccCceEEEccchhHHHHHHHHHHHc--CCCCceEcCCChhhC
Confidence 22 23578999999999999999999999886 999999999999887
|
| >d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Sulfurtransferase species: Thermus thermophilus [TaxId: 274]
Probab=99.30 E-value=4.6e-13 Score=121.11 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=73.5
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCC-hhhhhccccCCCCccccC-----cccccCCCchHHHHhh---
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARN-LYETRIGKFRTPSVETLD-----PEIRQFSDLPTWIDNN--- 200 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn-~~E~~~Gh~~g~~~~~l~-----~~~~~~~~~~~~~~~~--- 200 (608)
.-||++++++.|++ ++++|||||+ ..+|..|||+|+....+. +....+. .++.+.+.
T Consensus 7 ~lVs~~~l~~~l~~-------------~~v~iiDvr~~~~~y~~gHIPgAi~~~~~~~~~~~~~~~l~-~~~~l~~~~~~ 72 (143)
T d1uara1 7 VLVSTDWVQEHLED-------------PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFI-SEEEFAKLMER 72 (143)
T ss_dssp GEECHHHHHTTTTC-------------TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBC-CHHHHHHHHHH
T ss_pred ccCcHHHHHHHhCC-------------CCeEEEECCCCHHHHhcCCCCCcccccccccccccccccch-hhHHHHHHhhh
Confidence 46899999998865 6899999996 678999999995321110 0000011 12223322
Q ss_pred hhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 201 AEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 201 ~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+...++++||+||.+|. ++.++...|+.. ||+||+.|.||+.+|.++
T Consensus 73 ~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~--G~~~V~vldGG~~~W~~~ 120 (143)
T d1uara1 73 LGISNDTTVVLYGDKNNWWAAYAFWFFKYN--GHKDVRLMNGGRQKWVEE 120 (143)
T ss_dssp TTCCTTCEEEEECHHHHHHHHHHHHHHHHT--TCSCEEEETTHHHHHHHH
T ss_pred hccCCCceEEEecCCCcccchhHHHHHHHh--CCceEEEEcCcHHHHHHC
Confidence 23478899999997665 466677777775 999999999999999986
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=1.5e-11 Score=117.56 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=73.3
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCCc
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGK 453 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 453 (608)
.||||||++++...|..++..|.+.. ..++++.+|.| +.. ...
T Consensus 4 PvvllHG~~~~~~~~~~~~~~l~~~~-~~~~v~~~d~~--------G~g-----------------------~S~----- 46 (268)
T d1pjaa_ 4 PVIVVHGLFDSSYSFRHLLEYINETH-PGTVVTVLDLF--------DGR-----------------------ESL----- 46 (268)
T ss_dssp CEEEECCTTCCGGGGHHHHHHHHHHS-TTCCEEECCSS--------CSG-----------------------GGG-----
T ss_pred CEEEECCCCCCHHHHHHHHHHHHhhC-CCeEEEEeCCC--------CCC-----------------------CCC-----
Confidence 37899999999999996666666543 34889999877 110 000
Q ss_pred cccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 454 RETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 454 ~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
. .....++...+.+.+++++.+....|+||||||.+|+.+|.+++ ...++.+|++++..
T Consensus 47 ------------~-----~~~~~~~~~~~~l~~~l~~l~~~~~lvGhS~GG~ia~~~a~~~p----~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 47 ------------R-----PLWEQVQGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVMD----DHNVDSFISLSSPQ 105 (268)
T ss_dssp ------------S-----CHHHHHHHHHHHHHHHHHHCTTCEEEEEETHHHHHHHHHHHHCT----TCCEEEEEEESCCT
T ss_pred ------------C-----ccccCHHHHHHHHHHHHhccCCeEEEEccccHHHHHHHHHHHCC----ccccceEEEECCCC
Confidence 0 01234666777788888777766789999999999999999653 23699999988743
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.25 E-value=1.1e-11 Score=115.65 Aligned_cols=117 Identities=18% Similarity=0.157 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----ccccCCCCCCEEEEE
Q 007311 478 DVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA----EFEHRSINCPSLHIF 552 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~----~~~~~~i~~PvL~i~ 552 (608)
+...+.+.+++++.+ ....|+||||||.+|..++.+.. .+..++.+|++++...... ........+|++.++
T Consensus 52 ~~l~~~i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~---~~~~V~~~V~l~~p~~g~~~~~l~~~~~~~~~~~~~i~ 128 (179)
T d1ispa_ 52 PVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD---GGNKVANVVTLGGANRLTTGKALPGTDPNQKILYTSIY 128 (179)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSS---GGGTEEEEEEESCCGGGTCSBCCCCSCTTCCCEEEEEE
T ss_pred hhHHHHHHHHHHhcCCceEEEEeecCcCHHHHHHHHHcC---CchhhCEEEEECCCCCCchhhhcCCcccccCceEEEEE
Confidence 344445555555554 45579999999999999887542 2356999999987532211 122346679999999
Q ss_pred cCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc-CCCChhhHHHHHHHHHH
Q 007311 553 GGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI-IPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 553 G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~-ip~~~~~~~~i~~Fl~~ 606 (608)
|. .|.+|++..+ .++. ...+...+.+|. +..++...+.+.+||..
T Consensus 129 ~~---~D~~v~~~~~-----~l~~-~~~~~~~~~~H~~l~~~~~v~~~i~~~L~~ 174 (179)
T d1ispa_ 129 SS---ADMIVMNYLS-----RLDG-ARNVQIHGVGHIGLLYSSQVNSLIKEGLNG 174 (179)
T ss_dssp ET---TCSSSCHHHH-----CCBT-SEEEEESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred ec---CCcccCchhh-----cCCC-ceEEEECCCCchhhccCHHHHHHHHHHHhc
Confidence 99 8999997654 2343 255666667996 66677788899999863
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.25 E-value=2.3e-11 Score=119.45 Aligned_cols=185 Identities=16% Similarity=0.075 Sum_probs=119.8
Q ss_pred CCccEEEEecC--CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHG--FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG--~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|+||++|| ++++...|......|+++ ++.++.+|.+..-. .+..|...
T Consensus 37 ~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~---G~~v~~~d~r~~~~------------------------~g~~~~~~ 89 (260)
T d2hu7a2 37 TPGPTVVLVHGGPFAEDSDSWDTFAASLAAA---GFHVVMPNYRGSTG------------------------YGEEWRLK 89 (260)
T ss_dssp SSEEEEEEECSSSSCCCCSSCCHHHHHHHHH---TCEEEEECCTTCSS------------------------SCHHHHHT
T ss_pred CCceEEEEECCCCccCCCccccHHHHHHHhh---ccccccceeeeccc------------------------cccccccc
Confidence 45689999998 667677777444455544 79999998762100 01233221
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.. .+. ......++.++++++.+.. .....+|+|+|+||.+++.++... +..++++|
T Consensus 90 ~~---------------~~~--~~~~~~D~~~~~~~l~~~~--~~~~~~i~g~s~gg~~~~~~~~~~-----~~~~~a~i 145 (260)
T d2hu7a2 90 II---------------GDP--CGGELEDVSAAARWARESG--LASELYIMGYSYGGYMTLCALTMK-----PGLFKAGV 145 (260)
T ss_dssp TT---------------TCT--TTHHHHHHHHHHHHHHHTT--CEEEEEEEEETHHHHHHHHHHHHS-----TTSSSEEE
T ss_pred cc---------------ccc--chhhhhhhccccccccccc--ccceeeccccccccccccchhccC-----Cccccccc
Confidence 10 000 0112334555555554321 123447999999999999988743 45688899
Q ss_pred EecCCCCCccc-----------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-
Q 007311 528 LCSGFALHSAE-----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG- 577 (608)
Q Consensus 528 lisG~~~~~~~-----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~- 577 (608)
..++....... ....++++|+|++||+ +|.+||.+.+.++.+.+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~---~D~~vp~~~~~~~~~~l~~~~ 222 (260)
T d2hu7a2 146 AGASVVDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQ---NDSRTPLKPLLRLMGELLARG 222 (260)
T ss_dssp EESCCCCHHHHHHTCCHHHHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEET---TCSSSCSHHHHHHHHHHHHTT
T ss_pred ccccchhhhhhhcccccccccccccccccccccccccchhhcccccCCCceeeecc---cCceecHHHHHHHHHHHHHCC
Confidence 88887643210 1235788999999999 89999999999999888642
Q ss_pred -CcEEEEeCC-CCcCCCCh---hhHHHHHHHHHHhC
Q 007311 578 -CSVIIEHDC-GHIIPTRS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 578 -~~~vv~~~g-GH~ip~~~---~~~~~i~~Fl~~~L 608 (608)
.++++++++ ||.+...+ ..++.+.+||.+.|
T Consensus 223 ~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl 258 (260)
T d2hu7a2 223 KTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 258 (260)
T ss_dssp CCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHHh
Confidence 356777765 99875532 24567788988753
|
| >d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: 3-mercaptopyruvate sulfurtransferase species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=5.3e-12 Score=114.54 Aligned_cols=104 Identities=20% Similarity=0.228 Sum_probs=73.3
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCC----------hhhhhccccCCCCccccCc---ccccC-CCch--
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARN----------LYETRIGKFRTPSVETLDP---EIRQF-SDLP-- 194 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn----------~~E~~~Gh~~g~~~~~l~~---~~~~~-~~~~-- 194 (608)
-||++++++.|++ ++++|||+|. ..||..||||||....... +...+ ..+|
T Consensus 4 lVs~~wL~~~L~~-------------~~v~iiD~r~~~~~~~~~~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~ 70 (147)
T d1urha1 4 FVGADWLAEHIDD-------------PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRP 70 (147)
T ss_dssp EECHHHHHTTTTC-------------TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCH
T ss_pred cCcHHHHHHHhCC-------------CCeEEEEeeCCCCCccCccHHHHHHhCCccccEEeehhhhccccccccccCCCH
Confidence 4789999988865 6899999993 3579999999964221110 00000 0122
Q ss_pred HHHHh---hhhhcCCCeEEEEcCC-CccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 195 TWIDN---NAEQLQGKHVLMYCTG-GIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 195 ~~~~~---~~~~~k~k~Iv~yCtg-GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+.+.+ .+...++++||+||.+ |.++.++.-.|+.. ||+||+.|.||+.+|.++
T Consensus 71 ~~~~~~l~~~Gi~~~~~vVvY~~~~~~~A~r~~~~L~~~--G~~~V~vLdGG~~~W~~~ 127 (147)
T d1urha1 71 ETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTF--GVEKVSILGGGLAGWQRD 127 (147)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHT--TCSCEEEETTHHHHHHHT
T ss_pred HHHHHHHHHhCcCCCCeEEEEeCCCcccchhHHHHHHhh--cccceEEeCChHHHHHHc
Confidence 22222 2345789999999975 45677888888886 999999999999999875
|
| >d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Rhodanese species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.22 E-value=1.6e-11 Score=111.54 Aligned_cols=109 Identities=16% Similarity=0.113 Sum_probs=76.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--------ChhhhhccccCCCCccccCcc---cccC-C--CchH
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--------NLYETRIGKFRTPSVETLDPE---IRQF-S--DLPT 195 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--------n~~E~~~Gh~~g~~~~~l~~~---~~~~-~--~~~~ 195 (608)
.-||++++.+.|++. ..+++++||||| ...||+.|||+||....++.. ...+ . ..++
T Consensus 8 ~lVs~~wL~~~L~~~---------~~~~~~~IiD~r~~~~~~~~~~~~y~~gHIPGAv~~~~~~~~~~~~~~~~~~~~~~ 78 (149)
T d1rhsa1 8 ALVSTKWLAESVRAG---------KVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEA 78 (149)
T ss_dssp SEECHHHHHHHHHTT---------CCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHH
T ss_pred CccCHHHHHHHHhcc---------CCCCCEEEEEecCcCCCCcchHHHHHHhcccCceeccHHhhcccccchhhhhhhhH
Confidence 357999999999863 123689999999 356899999999643222110 0000 0 1122
Q ss_pred HHHhh---hhhcCCCeEEEEcCC---CccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 WIDNN---AEQLQGKHVLMYCTG---GIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~~~~~---~~~~k~k~Iv~yCtg---GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+.+. ....++++||+||.+ +..+.++.-.|+.. ||+||+.|.||+.+|.++
T Consensus 79 ~~~~~l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~--G~~~V~vLdGG~~~W~~~ 136 (149)
T d1rhsa1 79 GFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVF--GHRTVSVLNGGFRNWLKE 136 (149)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHT--TCCCEEEETTHHHHHHHT
T ss_pred HHHHHHhhhhccCCceeEEeeccCCcchhhhHHHHHHHHc--CCCceEEeCCcHHHHHHC
Confidence 23222 334688999999964 56788888889986 999999999999999986
|
| >d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: Sulfurtransferase species: Thermus thermophilus [TaxId: 274]
Probab=99.22 E-value=8.9e-12 Score=112.16 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=65.6
Q ss_pred CCcEEEecCChhhhh----------------ccccCCCCccccCcccccCCC------chHHHHhh---hhhcCCCeEEE
Q 007311 157 KKLVLLDARNLYETR----------------IGKFRTPSVETLDPEIRQFSD------LPTWIDNN---AEQLQGKHVLM 211 (608)
Q Consensus 157 ~~~vllDvRn~~E~~----------------~Gh~~g~~~~~l~~~~~~~~~------~~~~~~~~---~~~~k~k~Iv~ 211 (608)
.+.+|||||++.||. .|||+|+ ++.+...+.+ -++.+.+. ....++++||+
T Consensus 19 ~~~~lvD~R~~~ey~G~~~~~~~~~~~~~~r~GhIpgA----~nlp~~~~~~~~~~~~~~~~~~~~~~~~gi~~d~~vV~ 94 (141)
T d1uara2 19 GKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGA----KNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVV 94 (141)
T ss_dssp TSEEEEECSCHHHHHTCC--------CCCSCCSBCTTC----EECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEE
T ss_pred CCcEEEeCCCHHHcCCccCcccccCcccceeeeEeCCc----cccccccccccccccccHHHHHHHHHHhCCCCCCeEEE
Confidence 478999999999985 7999994 4433222211 13333332 23478999999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||.+|+|+..+...|+.. .||+||+.+.||+..|..
T Consensus 95 yC~~G~~As~~~~~l~~~-~G~~~v~~ydGs~~eW~~ 130 (141)
T d1uara2 95 YCRIAERSSHSWFVLKYL-LGYPHVKNYDGSWTEWGN 130 (141)
T ss_dssp ECSSHHHHHHHHHHHHTT-SCCSCEEEESSHHHHHTT
T ss_pred EecCcchHHHHHHHHHHH-cCCCCeeEeCCcHHHHhc
Confidence 999999999988888763 499999999999999965
|
| >d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Ubiquitin carboxyl-terminal hydrolase 8, USP8 domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=3.8e-12 Score=113.27 Aligned_cols=107 Identities=15% Similarity=0.187 Sum_probs=72.0
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC--chHHHHh---------
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD--LPTWIDN--------- 199 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~--~~~~~~~--------- 199 (608)
.|||+|++++|++. .++++|||||...||+.|||+|+ ++.+...+.. ....+..
T Consensus 2 ~Is~~eL~~~l~~~-----------~~~~liiDvR~~~ey~~~hI~gA----inip~~~l~~~~~~~~l~~~~~~~~~~~ 66 (135)
T d2gwfa1 2 AITAKELYTMMTDK-----------NISLIIMDARRMQDYQDSCILHS----LSVPEEAISPGVTASWIEAHLPDDSKDT 66 (135)
T ss_dssp EECHHHHHHHHHST-----------TSCEEEEECSCHHHHHHSCBTTC----EECCGGGCCTTCCHHHHHHTSCHHHHHH
T ss_pred eECHHHHHHHHhcC-----------CCCEEEEEecCCccccCCccCCe----EEeCHHHcccccchhhhhhhhhHHHHHH
Confidence 48999999999863 35799999999999999999994 4444333322 1111211
Q ss_pred hhhhcCCCeEEEEcCCCccHH-HH-------HHHHHhc---CCCCCcEEEcCccHHHHHHhCCC
Q 007311 200 NAEQLQGKHVLMYCTGGIRCE-MA-------SAYVRSK---GAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 200 ~~~~~k~k~Iv~yCtgGiR~~-~a-------~~~L~~~---~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
.....+.+.||+||..+.... .+ ...|... ..|..+|+.|+||+.+|.+++|.
T Consensus 67 ~~~~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~yp~ 130 (135)
T d2gwfa1 67 WKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLCYPQ 130 (135)
T ss_dssp HHTTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHHCGG
T ss_pred HhccCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHhChh
Confidence 112246789999997654321 11 2223211 13778999999999999999875
|
| >d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Cell cycle control phosphatase, catalytic domain domain: Erk2 binding domain of Mapk phosphatase mkp-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=2.7e-11 Score=110.30 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=74.5
Q ss_pred CCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccc-c-------cCCCc-h--H
Q 007311 127 NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEI-R-------QFSDL-P--T 195 (608)
Q Consensus 127 ~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~-~-------~~~~~-~--~ 195 (608)
..+..+|++++++.|+.+ +++++|||||...||+.|||+||.+..+.... + .+.++ + .
T Consensus 13 ~~~~~~s~e~L~~~l~~~-----------~~~~lilDvR~~~ey~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
T d1hzma_ 13 EMAISKTVAWLNEQLELG-----------NERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGE 81 (154)
T ss_dssp CCSSBSCCCCHHHHHHHC-----------SSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSH
T ss_pred cccCccCHHHHHHHHhcC-----------CCCEEEEECCCHHHHhcCCCCCCcccCcHHHHhhhccCCcccccccCCcHH
Confidence 446779999999999763 36899999999999999999996543332110 0 01111 1 1
Q ss_pred HHHhhhhhcCCCeEEEEcCCCc----------cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 196 WIDNNAEQLQGKHVLMYCTGGI----------RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 196 ~~~~~~~~~k~k~Iv~yCtgGi----------R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
.........+++.||+||.+|. +.......|... +.+||.|+||+.+|.+++|+
T Consensus 82 ~~~~~~~~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~v~iL~GG~~~w~~~yp~ 145 (154)
T d1hzma_ 82 DRDRFTRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDE---GCRAFYLEGGFSKFQAEFSL 145 (154)
T ss_dssp HHHHHHHSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHT---TCCCEECCCCHHHHHHHHCS
T ss_pred HHHHHhhcCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhc---CCeEEEEeCcHHHHHHHChH
Confidence 1111123356789999998754 223344455553 45899999999999999875
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.17 E-value=1.1e-10 Score=117.12 Aligned_cols=104 Identities=19% Similarity=0.038 Sum_probs=76.4
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------------------------------- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------------------------------- 538 (608)
..+++|+|+||.+|+.++.. ...++++|...+.......
T Consensus 180 ri~~~G~S~GG~~a~~~~~~------~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (322)
T d1vlqa_ 180 RIVIAGGSQGGGIALAVSAL------SKKAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFD 253 (322)
T ss_dssp EEEEEEETHHHHHHHHHHHH------CSSCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred hccccccccchHHHHHHHhc------CCCccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhh
Confidence 45799999999999987764 3468888876654432110
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
....++++|+|++||. +|.++|++.+.++++.+... ++++.+ ++||..+. ........+||+++|
T Consensus 254 ~~~~a~~i~~P~Lv~~G~---~D~~vp~~~~~~~~~~~~~~-~~l~~~p~~~H~~~~-~~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 254 GVNFAARAKIPALFSVGL---MDNICPPSTVFAAYNYYAGP-KEIRIYPYNNHEGGG-SFQAVEQVKFLKKLF 321 (322)
T ss_dssp HHHHHTTCCSCEEEEEET---TCSSSCHHHHHHHHHHCCSS-EEEEEETTCCTTTTH-HHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEEeC---CCCCcCHHHHHHHHHHCCCC-eEEEEECCCCCCCcc-ccCHHHHHHHHHHHh
Confidence 1135789999999999 89999999999999888754 566655 46998754 234566779998865
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=1.1e-10 Score=112.19 Aligned_cols=64 Identities=11% Similarity=0.036 Sum_probs=37.9
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
...+|++++.+.. ..|...+......+.+.+.. ..++++.+|||+.....+..+++.+.|.++|
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~i~g~H~~~le~p~~~~va~~i~~~L 285 (286)
T d1xkta_ 222 KYYGNVMLLRAKT-GGAYGEDLGADYNLSQVCDG-KVSVHVIEGDHRTLLEGSGLESIISIIHSSL 285 (286)
T ss_dssp CBCSCEEEEEESC-C------CCSSTTGGGTBCS-CEEEEEESSCTTTTTC-CHHHHHHHHHHHHC
T ss_pred ccCcceeEEEecc-CcccccChhHHHHHHHhCCC-CCEEEEEcCCCccccCCccHHHHHHHHHHhc
Confidence 4567777777762 12333333333334454443 3677777899996666677888999998886
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.15 E-value=1.2e-10 Score=114.58 Aligned_cols=153 Identities=16% Similarity=0.216 Sum_probs=107.6
Q ss_pred CCccEEEEecC--CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHG--FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG--~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+.+++|+|+|| .|+++..|. .|++.|.....++.++.|- +. ..
T Consensus 40 ~~~~~l~c~~~~~~gg~~~~y~----~La~~L~~~~~V~al~~pG-----------------------------~~--~~ 84 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPHEFT----RLAGALRGIAPVRAVPQPG-----------------------------YE--EG 84 (255)
T ss_dssp SCSSEEEEECCCSSSCSGGGGH----HHHHHHTTTCCEEEECCTT-----------------------------SS--TT
T ss_pred CCCCeEEEECCCCCCCCHHHHH----HHHHhcCCCceEEEEeCCC-----------------------------cC--CC
Confidence 34678999999 478889999 9999999889999999881 00 00
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
+....++++..+.+.+.|.+. +|+ .|+|||+||.+|+.+|.+.+. ...++.
T Consensus 85 -----------------------e~~~~s~~~~a~~~~~~i~~~~~~~P~-~L~GhS~Gg~vA~e~A~~l~~--~g~~v~ 138 (255)
T d1mo2a_ 85 -----------------------EPLPSSMAAVAAVQADAVIRTQGDKPF-VVAGHSAGALMAYALATELLD--RGHPPR 138 (255)
T ss_dssp -----------------------CCEESSHHHHHHHHHHHHHHTTSSSCE-EEEECSTTHHHHHHHHHHHHH--HTCCCS
T ss_pred -----------------------CCCCCCHHHHHHHHHHHHHHhCCCCCE-EEEEeCCcHHHHHHHHHhhHh--cCCCcc
Confidence 001235777777776666542 344 899999999999999987763 245688
Q ss_pred EEEEecCCCCCccc--------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH
Q 007311 525 FAILCSGFALHSAE--------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA 566 (608)
Q Consensus 525 ~vIlisG~~~~~~~--------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~ 566 (608)
++|++.++.|.... .....+.+|++++.++ +|.....
T Consensus 139 ~lvlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~p~l~v~a~---~~~~~~~-- 213 (255)
T d1mo2a_ 139 GVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAG---EPMGPWP-- 213 (255)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC---SSSSCCT--
T ss_pred EEEEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHHHHHHHHHHhcCCCccccceEEEeecC---CCCCcch--
Confidence 99999998876432 1346789999999998 4543321
Q ss_pred HHHHHHHhccCCcEEEEeCCCCc
Q 007311 567 SKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 567 ~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
...+...... ..+++..+|+|+
T Consensus 214 ~~~w~~~~~~-~~~~~~v~G~H~ 235 (255)
T d1mo2a_ 214 DDSWKPTWPF-EHDTVAVPGDHF 235 (255)
T ss_dssp TCCCCCCCCS-SCEEEECCSCCS
T ss_pred hhHHHHhCCC-CcEEEEECCCCc
Confidence 1223333332 377888899997
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.14 E-value=2e-10 Score=111.17 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=76.7
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHH
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKA 573 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~ 573 (608)
.++++|||+||.+++.++.. ..+.+++.+.+............+++|+|++||+ +|+.+|.+..+.+.+.
T Consensus 116 ~i~~~G~s~Gg~~a~~~a~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~~~G~---~D~~vp~e~~~~~~~~ 185 (233)
T d1dina_ 116 KVGLVGYCLGGALAFLVAAK-------GYVDRAVGYYGVGLEKQLNKVPEVKHPALFHMGG---QDHFVPAPSRQLITEG 185 (233)
T ss_dssp EEEEEEETHHHHHHHHHHHH-------TCSSEEEEESCSCGGGGGGGGGGCCSCEEEEEET---TCTTSCHHHHHHHHHH
T ss_pred ceEEEEecccccceeecccc-------cccceeccccccccccchhhhhccCCcceeeecc---cccCCCHHHHHHHHHH
Confidence 45799999999999998873 3466777777766555445567899999999999 8999999999998888
Q ss_pred hccC-CcEEEEeCC-CCcCCCC--hhh--------HHHHHHHHHH
Q 007311 574 FEEG-CSVIIEHDC-GHIIPTR--SPY--------IDEIKSFLQR 606 (608)
Q Consensus 574 ~~~~-~~~vv~~~g-GH~ip~~--~~~--------~~~i~~Fl~~ 606 (608)
+... ..+++.+++ +|.+-.. +.+ .+.+.+||.+
T Consensus 186 ~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~ 230 (233)
T d1dina_ 186 FGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP 230 (233)
T ss_dssp HTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred HhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence 7643 357777765 8975322 111 4667778765
|
| >d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: 3-mercaptopyruvate sulfurtransferase species: Leishmania major [TaxId: 5664]
Probab=99.06 E-value=8e-11 Score=105.53 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=64.3
Q ss_pred CCCcEEEecCChhhhh-----------ccccCCCCccccCcccccCC-----CchHHHHhhh--------hhcCCCeEEE
Q 007311 156 DKKLVLLDARNLYETR-----------IGKFRTPSVETLDPEIRQFS-----DLPTWIDNNA--------EQLQGKHVLM 211 (608)
Q Consensus 156 ~~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~~~~~-----~~~~~~~~~~--------~~~k~k~Iv~ 211 (608)
+++++|||+|+..||. .|||+|+............. .-++.+.+.. ...++++||+
T Consensus 10 ~p~~vlvD~R~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vV~ 89 (139)
T d1okga2 10 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 89 (139)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred CCCeEEEeCCCHHHhCCcCCCcccCCcCceeCCCeeccchhhccccccccccCCHHHhhhhhhhhhhhccCCCCCCeEEE
Confidence 4689999999999997 89999954322211100000 0122222211 2345789999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||.+|+|+..+...|+.. ||+||..+.||+..|...
T Consensus 90 yC~sG~~Aa~~~~~L~~~--G~~~v~vydGsw~eW~~~ 125 (139)
T d1okga2 90 SCGSGVTACINIALVHHL--GLGHPYLYCGSWSEYSGL 125 (139)
T ss_dssp ECSSSSTHHHHHHHHHHT--TSCCCEECSSHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHh--CCCCccCCCCCHHHHhCC
Confidence 999999999999889876 999999999999999653
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.04 E-value=8.3e-10 Score=115.14 Aligned_cols=109 Identities=12% Similarity=0.041 Sum_probs=74.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc---CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK---NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~---~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
+..+.|||||||.++...|..++..|++.-. ..+++|.+|.| +|.+=+
T Consensus 104 ~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLp-----------------------------G~G~S~ 154 (394)
T d1qo7a_ 104 EDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLP-----------------------------GYTFSS 154 (394)
T ss_dssp TTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCT-----------------------------TSTTSC
T ss_pred CCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeeccccc-----------------------------ccCCCC
Confidence 3446799999999999999988888876521 23899999988 111111
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
.|. +. ....+....+.+..++...+ ....++|+|.||.+++.++.+. +..+.+
T Consensus 155 ~P~----------------~~-----~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~-----p~~~~~ 208 (394)
T d1qo7a_ 155 GPP----------------LD-----KDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVG-----FDACKA 208 (394)
T ss_dssp CCC----------------SS-----SCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHH-----CTTEEE
T ss_pred CCC----------------CC-----CccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHh-----hccccc
Confidence 000 00 01235566777777777765 3447899999999999999865 456777
Q ss_pred EEEecCCC
Q 007311 526 AILCSGFA 533 (608)
Q Consensus 526 vIlisG~~ 533 (608)
++++....
T Consensus 209 ~~l~~~~~ 216 (394)
T d1qo7a_ 209 VHLNLCAM 216 (394)
T ss_dssp EEESCCCC
T ss_pred eeEeeecc
Confidence 77765443
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.01 E-value=8.4e-09 Score=98.69 Aligned_cols=123 Identities=12% Similarity=0.113 Sum_probs=86.3
Q ss_pred cHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCC
Q 007311 476 GLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGD 555 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~ 555 (608)
+...+++++...-.. .....++|||.||.+++.++.+. .....++++++..............+|.|++||+
T Consensus 83 d~~aa~~~~~~~~~~-~~~~~~~g~S~G~~~a~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~- 154 (218)
T d2i3da1 83 DAASALDWVQSLHPD-SKSCWVAGYSFGAWIGMQLLMRR------PEIEGFMSIAPQPNTYDFSFLAPCPSSGLIINGD- 154 (218)
T ss_dssp HHHHHHHHHHHHCTT-CCCEEEEEETHHHHHHHHHHHHC------TTEEEEEEESCCTTTSCCTTCTTCCSCEEEEEET-
T ss_pred HHHHHHhhhhccccc-ccceeEEeeehHHHHHHHHHHhh------ccccceeeccccccccchhhccccCCCceeeecc-
Confidence 344444444333211 23347899999999999988642 3566777777766555444566788999999999
Q ss_pred CCCCcccchHHHHHHHHHhccC---CcEEEEe-CCCCcCCCCh-hhHHHHHHHHHHhC
Q 007311 556 LGNDRQVANQASKELAKAFEEG---CSVIIEH-DCGHIIPTRS-PYIDEIKSFLQRFL 608 (608)
Q Consensus 556 ~~~D~~Vp~~~~~~l~~~~~~~---~~~vv~~-~gGH~ip~~~-~~~~~i~~Fl~~~L 608 (608)
.|.+++.....++.+.+... ..++++. +++|++.... +..+.+.+||++.|
T Consensus 155 --~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l~~~l 210 (218)
T d2i3da1 155 --ADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRL 210 (218)
T ss_dssp --TCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHHHH
T ss_pred --cceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHHHHhc
Confidence 89999999999998887642 2344455 5699986543 36788899998754
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=1.2e-09 Score=106.65 Aligned_cols=112 Identities=14% Similarity=0.071 Sum_probs=75.2
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------------------cccCCCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------------------FEHRSINC 546 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------------------~~~~~i~~ 546 (608)
...+|+|+|+||.+|+.++..... .....++..+.+++....... ......+.
T Consensus 113 ~ri~v~G~S~GG~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 191 (258)
T d1xfda2 113 TRVAVFGKDYGGYLSTYILPAKGE-NQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQ 191 (258)
T ss_dssp EEEEEEEETHHHHHHHHCCCCSSS-TTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSC
T ss_pred cceeccccCchHHHHHHHHhcCCc-ccceeeeeeeccccceeeeccccccccccccccccchHHhhccchhhhhhhhhcc
Confidence 456799999999999887754321 112346666666654432210 01123478
Q ss_pred CEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEe-CCCCcCCCCh---hhHHHHHHHHHHhC
Q 007311 547 PSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEH-DCGHIIPTRS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 547 PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~-~gGH~ip~~~---~~~~~i~~Fl~~~L 608 (608)
|+|++||+ .|..||.+.+.++.+.+... ..+++++ +.+|.+.... ...+.+.+||++.|
T Consensus 192 p~Li~hG~---~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 192 QFLIIHPT---ADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 256 (258)
T ss_dssp EEEEEEET---TCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred cccccccC---CCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhh
Confidence 99999999 89999999999998887643 3555555 4599875432 24578888998754
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.90 E-value=6.6e-09 Score=100.75 Aligned_cols=164 Identities=10% Similarity=0.003 Sum_probs=104.4
Q ss_pred CCccEEEEecCCC-----CChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCcccee
Q 007311 370 RRKLRILCLHGFR-----QNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFA 443 (608)
Q Consensus 370 ~~~~~iLlLHG~G-----~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (608)
..+++||++||-| .+...|......|.+.+. .++.++.+|.+ +. + ...
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYr--l~----p--------------------~~~ 82 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYR--LS----P--------------------EIT 82 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCC--CT----T--------------------TSC
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccc--cC----c--------------------chh
Confidence 5568999999932 234566655566777765 57899999855 11 0 000
Q ss_pred eeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhh-----
Q 007311 444 WFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLK----- 518 (608)
Q Consensus 444 W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~----- 518 (608)
+ ....++..+++++|.+.. ......|+|+|+||.+|+.++.......
T Consensus 83 ~--------------------------~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~ 134 (263)
T d1vkha_ 83 N--------------------------PRNLYDAVSNITRLVKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSE 134 (263)
T ss_dssp T--------------------------THHHHHHHHHHHHHHHHH--TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCH
T ss_pred h--------------------------hHHHHhhhhhhhcccccc--cccceeeeccCcHHHHHHHHHHhccCccccccc
Confidence 0 012334555556555432 2344589999999999999887543210
Q ss_pred -------CCCCccEEEEecCCCCCccc----------------------------------cccCCCCCCEEEEEcCCCC
Q 007311 519 -------GEIDFRFAILCSGFALHSAE----------------------------------FEHRSINCPSLHIFGGDLG 557 (608)
Q Consensus 519 -------~~~~l~~vIlisG~~~~~~~----------------------------------~~~~~i~~PvL~i~G~~~~ 557 (608)
....++.++..++....... .....+.+|+|++||+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~--- 211 (263)
T d1vkha_ 135 AQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSY--- 211 (263)
T ss_dssp HHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEET---
T ss_pred cccccccccccccccccccccccchhhhhhccccchhhhcccccccccccccccccCccccccccccCCCeeeeecC---
Confidence 11345666666665432110 0123568999999999
Q ss_pred CCcccchHHHHHHHHHhccCC--cEEEEeCC-CCcC
Q 007311 558 NDRQVANQASKELAKAFEEGC--SVIIEHDC-GHII 590 (608)
Q Consensus 558 ~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~g-GH~i 590 (608)
+|++||.+.+.++++.++... .+++..++ +|..
T Consensus 212 ~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~ 247 (263)
T d1vkha_ 212 SDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHND 247 (263)
T ss_dssp TCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGG
T ss_pred CCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchh
Confidence 899999999999999988532 45666665 6854
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.87 E-value=5.7e-09 Score=101.55 Aligned_cols=107 Identities=18% Similarity=0.138 Sum_probs=73.6
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------------------cccCC-CC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------------------FEHRS-IN 545 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------------------~~~~~-i~ 545 (608)
..+++|+|+||.+++.++... +.....++..++....... ..... .+
T Consensus 115 ~i~i~G~S~GG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (258)
T d2bgra2 115 RIAIWGWSYGGYVTSMVLGSG-----SGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQ 189 (258)
T ss_dssp EEEEEEETHHHHHHHHHHTTT-----CSCCSEEEEESCCCCGGGSBHHHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGG
T ss_pred cccccCcchhhcccccccccC-----CCcceEEEEeecccccccccccccchhcccccchhhHHHhhccccccccccccc
Confidence 356999999999999988743 3445555555544322110 01122 34
Q ss_pred CCEEEEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeCC-CCcCCCCh---hhHHHHHHHHHHhC
Q 007311 546 CPSLHIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHDC-GHIIPTRS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~g-GH~ip~~~---~~~~~i~~Fl~~~L 608 (608)
+|+|++||+ +|.+||...++++++.+.. ..++++++++ +|.+.... ...+.+.+||++.|
T Consensus 190 ~P~li~hG~---~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l 255 (258)
T d2bgra2 190 VEYLLIHGT---ADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 255 (258)
T ss_dssp SEEEEEEET---TCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CChheeeec---CCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 899999999 8999999999999988764 2366777665 89864422 24678899998764
|
| >d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Rhodanese/Cell cycle control phosphatase superfamily: Rhodanese/Cell cycle control phosphatase family: Multidomain sulfurtransferase (rhodanese) domain: 3-mercaptopyruvate sulfurtransferase species: Leishmania major [TaxId: 5664]
Probab=98.86 E-value=6.4e-10 Score=101.25 Aligned_cols=102 Identities=17% Similarity=0.161 Sum_probs=69.8
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--------ChhhhhccccCCCCccccCcccc------cC-CCch
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--------NLYETRIGKFRTPSVETLDPEIR------QF-SDLP 194 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--------n~~E~~~Gh~~g~~~~~l~~~~~------~~-~~~~ 194 (608)
.-|||+++.+.++ +++|||+| ...||..|||+|+....++.... .. ..+|
T Consensus 8 ~lvs~~~L~~~l~---------------d~~iiD~r~~l~~~~~g~~~Y~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP 72 (156)
T d1okga1 8 VFLDPSEVADHLA---------------EYRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLP 72 (156)
T ss_dssp CEECHHHHTTCGG---------------GSEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCC
T ss_pred cEeCHHHHHHhcC---------------CCEEEEeeccCCCCcchHHHHHHcCCCCCeEcCHHHhcccccCCCCCccccC
Confidence 3589999887663 58999999 46789999999964222211000 00 0122
Q ss_pred --HHHHhh---hhhcCCCeEEEEcCC-C-ccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 195 --TWIDNN---AEQLQGKHVLMYCTG-G-IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 195 --~~~~~~---~~~~k~k~Iv~yCtg-G-iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+.+.+. +....+++||+||.+ | ..+.++.-.|+.. |+ ||+.|.||+.+|.++
T Consensus 73 ~~~~~~~~l~~lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~--G~-~v~iLdGG~~aW~~~ 131 (156)
T d1okga1 73 PCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSL--GA-DAYVINGGFQACKAA 131 (156)
T ss_dssp CHHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHH--TC-CEEEETTTTHHHHTT
T ss_pred CHHHHHHHHHhccccCCceEEEEeCCCCchHHHHHHHHHHHc--CC-eeEEeCCCHHHHHHC
Confidence 233322 334789999999843 3 4677888888887 96 899999999999875
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=98.71 E-value=5e-08 Score=96.04 Aligned_cols=156 Identities=12% Similarity=0.011 Sum_probs=100.4
Q ss_pred CccEEEEecC---CCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHG---FRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG---~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
++|.||++|| ..++...|......|.+ .++.++.++.+. . +...|-
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~---~G~~Vv~~~YRl--~------------------------p~~~~p-- 109 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLAVGALS---KGWAVAMPSYEL--C------------------------PEVRIS-- 109 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHH---TTEEEEEECCCC--T------------------------TTSCHH--
T ss_pred CCCeEEEECCCCCccCChhHhhhHHHHHhc---CCceeecccccc--c------------------------ccccCc--
Confidence 4689999999 34556666533334443 489999998662 1 011221
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhh-hhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWER-LKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~-~~~~~~l~~v 526 (608)
...++..++++++.+. .....+|+|+|.||.+|+.++..... ......++++
T Consensus 110 ------------------------~~~~d~~~a~~~~~~~---~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~ 162 (261)
T d2pbla1 110 ------------------------EITQQISQAVTAAAKE---IDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNV 162 (261)
T ss_dssp ------------------------HHHHHHHHHHHHHHHH---SCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEE
T ss_pred ------------------------hhHHHHHHHHHHHHhc---ccCceEEEEcchHHHHHHHHhcCcccccchhhchhhh
Confidence 1234555556655443 34566899999999999876642210 0112458899
Q ss_pred EEecCCCCCccc----------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe
Q 007311 527 ILCSGFALHSAE----------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH 584 (608)
Q Consensus 527 IlisG~~~~~~~----------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~ 584 (608)
+.++|....... ........|++++||+ +|+.++.+.++++.+.++. ..++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SP~~~~~~~~~P~li~~G~---~D~~~~~~qs~~~~~~l~~--~~~~~~ 237 (261)
T d2pbla1 163 VPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGG---AERPAFLDQAIWLVEAWDA--DHVIAF 237 (261)
T ss_dssp EEESCCCCCGGGGGSTTHHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEET---TSCHHHHHHHHHHHHHHTC--EEEEET
T ss_pred hccccccccchhhhhhhcccccCCHHHHHHhCchhhcccCCCeEEEEEec---CCCchHHHHHHHHHHHhCC--CceEeC
Confidence 999987654321 1234578999999999 8999988999999988864 344445
Q ss_pred CCCCc
Q 007311 585 DCGHI 589 (608)
Q Consensus 585 ~gGH~ 589 (608)
+.+|+
T Consensus 238 ~~~HF 242 (261)
T d2pbla1 238 EKHHF 242 (261)
T ss_dssp TCCTT
T ss_pred CCCch
Confidence 55774
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.68 E-value=2.4e-08 Score=98.98 Aligned_cols=123 Identities=16% Similarity=0.133 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------------
Q 007311 478 DVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------- 538 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------- 538 (608)
++.+.+|.+.........+|.|+|+||.+|+.++++. +..|++++++||.......
T Consensus 104 ~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~-----pd~f~av~~~Sg~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
T d1sfra_ 104 SELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYH-----PQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKAS 178 (288)
T ss_dssp THHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCSCTTSTTHHHHHHHHHHHTTSCCHH
T ss_pred HHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhc-----cccccEEEEecCcccccccccchhhhhhhhhcccccHh
Confidence 3444444444433345568999999999999999954 6679999999998653211
Q ss_pred --------------------cccCCCCCCEEEEEcCCCCCCcccc--------------hHHHHHHHHHhccCC--cEEE
Q 007311 539 --------------------FEHRSINCPSLHIFGGDLGNDRQVA--------------NQASKELAKAFEEGC--SVII 582 (608)
Q Consensus 539 --------------------~~~~~i~~PvL~i~G~~~~~D~~Vp--------------~~~~~~l~~~~~~~~--~~vv 582 (608)
.......+++++.+|. .|..++ ...++++.+.+.... ..++
T Consensus 179 ~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~---~d~~~~~~~~~~~~~~e~~~~~~~~~l~~~l~~~g~~~~~~ 255 (288)
T d1sfra_ 179 DMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGN---GKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVF 255 (288)
T ss_dssp HHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCC---SCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred hhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEeCC---CCCCCccccccccchhHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 0001125678889998 565443 245667777776432 3334
Q ss_pred Ee--CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 583 EH--DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 583 ~~--~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++ .|+|..+.....+.+...||.+.|
T Consensus 256 ~~~~~G~H~w~~w~~~l~~~l~~l~~al 283 (288)
T d1sfra_ 256 DFPDSGTHSWEYWGAQLNAMKPDLQRAL 283 (288)
T ss_dssp ECCSCCCSSHHHHHHHHHHTHHHHHHHH
T ss_pred EECCCCccChhHHHHHHHHHHHHHHHhc
Confidence 43 357987654556667777777653
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.67 E-value=9.8e-08 Score=92.44 Aligned_cols=98 Identities=15% Similarity=0.070 Sum_probs=69.7
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------cccCCCCCCEEEEEcCCCCCCcccchH
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------FEHRSINCPSLHIFGGDLGNDRQVANQ 565 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------~~~~~i~~PvL~i~G~~~~~D~~Vp~~ 565 (608)
..+|.||||||.+|+.++++ .+..|++++.+||....... ........|+++.||+ +|..++
T Consensus 136 ~i~i~G~S~GG~~a~~~a~~-----~Pd~F~~v~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~---~D~~~~-- 205 (255)
T d1jjfa_ 136 HRAIAGLSMGGGQSFNIGLT-----NLDKFAYIGPISAAPNTYPNERLFPDGGKAAREKLKLLFIACGT---NDSLIG-- 205 (255)
T ss_dssp GEEEEEETHHHHHHHHHHHT-----CTTTCSEEEEESCCTTSCCHHHHCTTTTHHHHHHCSEEEEEEET---TCTTHH--
T ss_pred eeEeeeccchhHHHHHHHHh-----CCCcccEEEEEccCcCCcccccccccHHHHhhccCCcceEEeCC---CCCCch--
Confidence 35789999999999999994 46779999999988755432 1123456899999999 898876
Q ss_pred HHHHHHHHhccC--CcEEEEe-CCCCcCCCChhhHHHHHHHH
Q 007311 566 ASKELAKAFEEG--CSVIIEH-DCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 566 ~~~~l~~~~~~~--~~~vv~~-~gGH~ip~~~~~~~~i~~Fl 604 (608)
..+++++.+... ...+.++ ++||....- .+.+.+||
T Consensus 206 ~~~~~~~~L~~~g~~~~~~~~~~ggH~~~~W---~~~l~~fl 244 (255)
T d1jjfa_ 206 FGQRVHEYCVANNINHVYWLIQGGGHDFNVW---KPGLWNFL 244 (255)
T ss_dssp HHHHHHHHHHHTTCCCEEEEETTCCSSHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCcCHHHH---HHHHHHHH
Confidence 466788887643 3555555 579986432 34455555
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.61 E-value=2e-07 Score=93.54 Aligned_cols=108 Identities=18% Similarity=0.058 Sum_probs=73.9
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------------------cccC-CCCC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------------------FEHR-SINC 546 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------------------~~~~-~i~~ 546 (608)
.+|.|+||||.-|+.+|++... +..+.+++.+|+...+... .... ....
T Consensus 155 ~~I~G~SmGG~gAl~~al~~~~---p~~f~~~~s~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 231 (299)
T d1pv1a_ 155 VAITGHSMGGYGAICGYLKGYS---GKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDD 231 (299)
T ss_dssp EEEEEETHHHHHHHHHHHHTGG---GTCCSEEEEESCCCCSTTSHHHHHHHHHHSCC----CGGGCHHHHGGGSCCCTTC
T ss_pred eEEEeecccHHHHHHHHHHhcC---CCceEEEeeccCcCCcccccchhhhhhhhcccchhhhhhcCHHHHHHHhhccCCc
Confidence 4799999999999999986532 4568888888887654320 1122 2345
Q ss_pred CEEEEEcCCCCCCcccchH-HHHHHHHHhccC----CcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 547 PSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG----CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 547 PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~----~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++++..|+ +|..++.. ..+.+.+.++.. ..++.+++| ||..+--..++.+.++|+.+.|
T Consensus 232 ~i~~~~G~---~D~~~~~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~yW~~~i~~~l~f~a~~l 296 (299)
T d1pv1a_ 232 RILIHVGD---SDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNL 296 (299)
T ss_dssp CEEEECCT---TCTTTTTTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred ceeEecCC---CCcchhhhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 67777899 78766543 235566666532 245666777 7987655668888899998865
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=98.58 E-value=3.4e-07 Score=94.14 Aligned_cols=63 Identities=22% Similarity=0.321 Sum_probs=48.1
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC--CCc--CCCChhhHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC--GHI--IPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g--GH~--ip~~~~~~~~i~~Fl~~ 606 (608)
..+|+.|+|+|..+ .|-..|++..+++++.++.. .+++++.+. ||. .-..+.+.+.|.+||++
T Consensus 292 L~~I~AkvLvi~~~---sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 292 LSNATCRFLVVSYS---SDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HTTCCSEEEEEEET---TCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HhhCCCCEEEEEeC---cccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 46899999999999 89999999999999999864 234555544 885 22334577788888864
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=98.57 E-value=2.3e-07 Score=95.23 Aligned_cols=62 Identities=13% Similarity=0.045 Sum_probs=44.7
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEeCC--CCcC--CCChhhHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEHDC--GHII--PTRSPYIDEIKSFLQ 605 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~g--GH~i--p~~~~~~~~i~~Fl~ 605 (608)
..+|+.|+|+|..+ .|...|++..+++++.++... +++++.++ ||.- ...+.+-..|.+||+
T Consensus 288 L~~I~a~vLvi~~~---sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~ 355 (357)
T d2b61a1 288 LSRIKARYTLVSVT---TDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLA 355 (357)
T ss_dssp HTTCCSEEEEEEET---TCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHH
T ss_pred HhhcCCCEEEEEeC---CccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCcCHHHHHHHHHHHHc
Confidence 46899999999999 899999999999999998542 45555554 8851 121234556666765
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.57 E-value=1.3e-07 Score=93.40 Aligned_cols=53 Identities=21% Similarity=0.198 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 478 DVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
++.+.+|.+..........|.|+||||.+|+.+|++. +..|++++.+||....
T Consensus 99 ~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~-----Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 99 REMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYY-----PQQFPYAASLSGFLNP 151 (280)
T ss_dssp THHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHC-----TTTCSEEEEESCCCCT
T ss_pred HHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhC-----cCceeEEEEecCccCc
Confidence 3344444443332334458999999999999999954 6789999999998643
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=98.53 E-value=4.1e-07 Score=93.94 Aligned_cols=60 Identities=22% Similarity=0.278 Sum_probs=44.2
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC--CCCc--CCCChhhHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD--CGHI--IPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~--gGH~--ip~~~~~~~~i~~Fl~ 605 (608)
...|+.|+|+|.++ .|-..|++..+++++.+++ .++.+.+ .||. ....+.+...|.+||+
T Consensus 312 L~~I~a~~LvI~~~---sD~lFPp~~~~e~a~~l~~--a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~ 375 (376)
T d2vata1 312 LAMITQPALIICAR---SDGLYSFDEHVEMGRSIPN--SRLCVVDTNEGHDFFVMEADKVNDAVRGFLD 375 (376)
T ss_dssp HTTCCSCEEEEECT---TCSSSCHHHHHHHHHHSTT--EEEEECCCSCGGGHHHHTHHHHHHHHHHHHT
T ss_pred HhhCCCCEEEEEeC---cccCcCHHHHHHHHHhcCC--CeEEEECCCCCccccccCHHHHHHHHHHHHc
Confidence 45789999999999 8999999999999999987 5555554 4884 1111234566666664
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=98.52 E-value=3.1e-07 Score=92.78 Aligned_cols=171 Identities=12% Similarity=-0.018 Sum_probs=98.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
..|||+||++.+...+. ...+++.|. .+++++.+|.|.. .+-+
T Consensus 32 ~PVvlvHG~~~~~~~~~--~~~~~~~L~~~Gy~v~~~d~~g~-----------------------------g~~d----- 75 (317)
T d1tcaa_ 32 KPILLVPGTGTTGPQSF--DSNWIPLSTQLGYTPCWISPPPF-----------------------------MLND----- 75 (317)
T ss_dssp SEEEEECCTTCCHHHHH--TTTHHHHHHTTTCEEEEECCTTT-----------------------------TCSC-----
T ss_pred CcEEEECCCCCCCcchh--HHHHHHHHHhCCCeEEEecCCCC-----------------------------CCCc-----
Confidence 34889999999986521 015666665 4688888886610 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++....+..+++..+ ..+.|+||||||.++.+++..++. ....++.+|.++
T Consensus 76 ---------------------~~~sae~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~--~~~~V~~~v~i~ 132 (317)
T d1tcaa_ 76 ---------------------TQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPS--IRSKVDRLMAFA 132 (317)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGG--GTTTEEEEEEES
T ss_pred ---------------------hHhHHHHHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCC--cchheeEEEEeC
Confidence 01112233333444444444 556799999999999999886542 235688999988
Q ss_pred CCCCCccc-----------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc-CCcE
Q 007311 531 GFALHSAE-----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSV 580 (608)
Q Consensus 531 G~~~~~~~-----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~-~~~~ 580 (608)
+...-... .....-.+|++.|++. .|.+|.+..+..+.+.-.. +...
T Consensus 133 ~~~~Gt~~a~~~~~~~~~~pa~~q~~~~s~fl~~L~~~~~~~~~V~~t~I~s~---~D~iV~P~~~~~~~~~~~~~~~~N 209 (317)
T d1tcaa_ 133 PDYKGTVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIVPTTNLYSA---TDEIVQPQVSNSPLDSSYLFNGKN 209 (317)
T ss_dssp CCTTCBGGGHHHHHTTCBCHHHHHTBTTCHHHHHHHHTTTTBCSSCEEEEECT---TCSSSCCCCSSSTTSTTCCBTSEE
T ss_pred CCCCCcccccchhhhhccCchhhhhcCCcHHHHHHHhCCCCCCCCCEEEEecC---CCcccCccccchhccccCCCCcee
Confidence 75422110 0112235899999999 8999877554432221111 1122
Q ss_pred EEEe-------CCCCc-CCCChhhHHHHHHHHH
Q 007311 581 IIEH-------DCGHI-IPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 581 vv~~-------~gGH~-ip~~~~~~~~i~~Fl~ 605 (608)
+... ..+|. +..++.....+.+-|.
T Consensus 210 i~vq~~c~~~~~~~H~~l~~~p~~~~~v~daL~ 242 (317)
T d1tcaa_ 210 VQAQAVCGPLFVIDHAGSLTSQFSYVVGRSALR 242 (317)
T ss_dssp EEHHHHHCTTCCCCTTHHHHBHHHHHHHHHHHH
T ss_pred EEeecccCCCCcCCccccccCHHHHHHHHHHHh
Confidence 3331 24785 4444455566666553
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.52 E-value=2.3e-06 Score=85.44 Aligned_cols=129 Identities=16% Similarity=0.015 Sum_probs=78.3
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------ 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------ 538 (608)
.++...++.++.+...+.+ ..++|+|.|.||.+|+.++....... .......++..........
T Consensus 129 ~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 207 (317)
T d1lzla_ 129 VNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEG-VVPVAFQFLEIPELDDRLETVSMTNFVDTPL 207 (317)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHC-SSCCCEEEEESCCCCTTCCSHHHHHCSSCSS
T ss_pred ccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcc-cccccccccccccccccccccccccccccch
Confidence 3456667777766655543 45679999999999999887654322 2223333332222111000
Q ss_pred ----------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEE
Q 007311 539 ----------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVII 582 (608)
Q Consensus 539 ----------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv 582 (608)
........|+|+++|+ +|.. ...++++++.+... .++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~---~D~l--~~~~~~~~~~L~~~G~~v~~~ 282 (317)
T d1lzla_ 208 WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTME---LDPL--RDEGIEYALRLLQAGVSVELH 282 (317)
T ss_dssp CCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEET---TCTT--HHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECC---CCCC--HHHHHHHHHHHHHCCCCEEEE
Confidence 0011224799999999 7854 45788888877743 35666
Q ss_pred EeCC-CCcCC---CCh---hhHHHHHHHHHHhC
Q 007311 583 EHDC-GHIIP---TRS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 583 ~~~g-GH~ip---~~~---~~~~~i~~Fl~~~L 608 (608)
++++ +|.+. ... ..++++.+||+++|
T Consensus 283 ~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~L 315 (317)
T d1lzla_ 283 SFPGTFHGSALVATAAVSERGAAEALTAIRRGL 315 (317)
T ss_dssp EETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred EECcCccCCcccCCchHHHHHHHHHHHHHHHHh
Confidence 6765 89643 222 24677888998876
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.51 E-value=1.8e-07 Score=91.88 Aligned_cols=39 Identities=28% Similarity=0.206 Sum_probs=32.7
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
.....|.|+||||.+|+.++++. +..|++++.+||...+
T Consensus 104 ~~r~~i~G~SmGG~~Al~la~~~-----Pd~F~av~~~SG~~~~ 142 (267)
T d1r88a_ 104 PGGHAAVGAAQGGYGAMALAAFH-----PDRFGFAGSMSGFLYP 142 (267)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCCCT
T ss_pred CCceEEEEEcchHHHHHHHHHhC-----cccccEEEEeCCccCC
Confidence 34557999999999999999954 6789999999998754
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.48 E-value=3.4e-07 Score=88.24 Aligned_cols=102 Identities=16% Similarity=0.000 Sum_probs=75.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------cccCCCCCCEEEEEcCCCCCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------FEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------~~~~~i~~PvL~i~G~~~~~D 559 (608)
..+|+|+|+||.+|+.++.++ +..|+.++.+||....... ........|+++.+|. .|
T Consensus 124 ~~~i~G~S~GG~~al~~~~~~-----P~~F~a~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~---~D 195 (246)
T d3c8da2 124 RTVVAGQSFGGLSALYAGLHW-----PERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGI---RE 195 (246)
T ss_dssp GCEEEEETHHHHHHHHHHHHC-----TTTCCEEEEESCCTTTTCTTSSSCCHHHHHHHTTSSCCCSCEEEEEEES---SC
T ss_pred ceEEEecCchhHHHhhhhccC-----CchhcEEEcCCcccccccCCccchHHHHHHhhhhhhhccCCCeEEEecC---CC
Confidence 348999999999999999954 5679999999997654321 2244678899999999 78
Q ss_pred cccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 560 RQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
..+ ...++++++.++.. ...+.++++||....-+..+.+...||
T Consensus 196 ~~~-~~~~~~l~~~L~~~g~~~~~~~~~GgH~~~~W~~~l~~~l~~l 241 (246)
T d3c8da2 196 PMI-MRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDL 241 (246)
T ss_dssp HHH-HHHHHHHHHHTGGGTTSEEEEEESCCSCHHHHHHHHHHHHHHH
T ss_pred cch-hHHHHHHHHHHHHCCCCEEEEEeCCCCChHHHHHHHHHHHHHH
Confidence 766 47788999988853 366777889998754344444444444
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.43 E-value=1e-06 Score=87.51 Aligned_cols=129 Identities=15% Similarity=0.040 Sum_probs=78.7
Q ss_pred cccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------
Q 007311 474 TDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------ 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------ 538 (608)
.++...++.++.+...+.+ ..++|+|+|.||.+++.++....+ .+...+.+.++++........
T Consensus 123 ~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (308)
T d1u4na_ 123 VEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKE-RGGPALAFQLLIYPSTGYDPAHPPASIEENAEG 201 (308)
T ss_dssp HHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHH-HTCCCCCCEEEESCCCCCCTTSCCHHHHHTSSS
T ss_pred cchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhh-ccCCCcccccccccccccccccccchhhhcccc
Confidence 3456666777666554432 345799999999999988876543 223345555555544321110
Q ss_pred -------------------c--c---------cCCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC
Q 007311 539 -------------------F--E---------HRSIN-CPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD 585 (608)
Q Consensus 539 -------------------~--~---------~~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~ 585 (608)
. . ..... .|+|+++|+ .|..+ ..++++++.+... .+++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~---~D~l~--~~~~~~~~~L~~~G~~v~~~~~~ 276 (308)
T d1u4na_ 202 YLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQ---YDPLR--DVGKLYAEALNKAGVKVEIENFE 276 (308)
T ss_dssp SSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEE---ECTTH--HHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecC---cCCch--HHHHHHHHHHHHCCCCEEEEEEC
Confidence 0 0 00112 489999999 78655 4678888888753 35666665
Q ss_pred C-CCcCCC----Ch---hhHHHHHHHHHHhC
Q 007311 586 C-GHIIPT----RS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 586 g-GH~ip~----~~---~~~~~i~~Fl~~~L 608 (608)
+ +|.+.. .+ +..+.+.+||++.|
T Consensus 277 g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 277 DLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp EEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 4 896422 11 35678888988754
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.28 E-value=6.3e-06 Score=82.25 Aligned_cols=124 Identities=17% Similarity=0.064 Sum_probs=77.8
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------- 538 (608)
++...++.++.+...+.+ ...+|.|.|.||.+|+.++....+ .+.....+.++++++......
T Consensus 131 ~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~-~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~ 209 (311)
T d1jjia_ 131 YDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARD-SGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWI 209 (311)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH-TTCCCEEEEEEESCCCCSSSCCHHHHHTSSSCSS
T ss_pred hhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhh-ccccccceeeeecceeeeccCccccccccccccc
Confidence 455566777766655533 356799999999999988876543 234566777887776543211
Q ss_pred ----------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-C
Q 007311 539 ----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-G 587 (608)
Q Consensus 539 ----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-G 587 (608)
......-.|+++++|+ .|..+ ..+.++++.+... .++++++++ +
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~---~D~l~--d~~~~~~~~L~~~Gv~v~~~~~~g~~ 284 (311)
T d1jjia_ 210 LDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAE---YDPLR--DEGEVFGQMLRRAGVEASIVRYRGVL 284 (311)
T ss_dssp CCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEE---ECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred ccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcC---CCCCh--HHHHHHHHHHHHCCCCEEEEEECCCC
Confidence 0011223589999999 78654 4677777777643 356666665 8
Q ss_pred CcCC----CCh---hhHHHHHHHH
Q 007311 588 HIIP----TRS---PYIDEIKSFL 604 (608)
Q Consensus 588 H~ip----~~~---~~~~~i~~Fl 604 (608)
|.+. ..+ +.+++|.+||
T Consensus 285 H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 285 HGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp TTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred CccccCCCcCHHHHHHHHHHHHHh
Confidence 9542 222 2455566665
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.20 E-value=5.5e-06 Score=79.62 Aligned_cols=108 Identities=18% Similarity=0.094 Sum_probs=70.7
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------------------------c--
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------------------------F-- 539 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------------------------~-- 539 (608)
...++.|.|.||.+++.++.... ..++.++...+....... .
T Consensus 116 ~~~~~~~g~~gg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (280)
T d1qfma2 116 KRLTINGGSNGGLLVATCANQRP-----DLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNV 190 (280)
T ss_dssp GGEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCC
T ss_pred ccccccccccccchhhhhhhccc-----chhhheeeeccccchhhhccccccccceecccCCCccccccccccccccccc
Confidence 44568899999988888887543 334566666555432110 0
Q ss_pred -c---cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc---------CCcEEEEe-CCCCcCCCChh----hHHHHH
Q 007311 540 -E---HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE---------GCSVIIEH-DCGHIIPTRSP----YIDEIK 601 (608)
Q Consensus 540 -~---~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~---------~~~~vv~~-~gGH~ip~~~~----~~~~i~ 601 (608)
. ......|+|++||+ +|+.||...++++++.+.. ..++++++ ++||.+..... ...++.
T Consensus 191 s~~~~~~~~~pP~LiihG~---~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~ 267 (280)
T d1qfma2 191 KLPEADDIQYPSMLLLTAD---HDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMF 267 (280)
T ss_dssp CCCSSTTCCCCEEEEEEET---TCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHH
T ss_pred chhhhcccCCCceEEeecc---cCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHH
Confidence 0 11122379999999 8999999999999998842 12455555 56998865432 234567
Q ss_pred HHHHHhC
Q 007311 602 SFLQRFL 608 (608)
Q Consensus 602 ~Fl~~~L 608 (608)
+||.+.|
T Consensus 268 ~fl~k~L 274 (280)
T d1qfma2 268 AFIARCL 274 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8998865
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=98.17 E-value=8.3e-06 Score=79.48 Aligned_cols=104 Identities=15% Similarity=0.156 Sum_probs=72.7
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccch-----HHHHHH
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVAN-----QASKEL 570 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~-----~~~~~l 570 (608)
....++++.......+.. ....+++++.+..............+++|+|++||+ +|+++|. ..++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~---~D~~~p~~~~~~~~~~~~ 268 (318)
T d1qlwa_ 197 VLLSHSQSGIYPFQTAAM-----NPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGD---HIEEFPRWAPRLKACHAF 268 (318)
T ss_dssp EEEEEGGGTTHHHHHHHH-----CCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECS---SCTTCTTTHHHHHHHHHH
T ss_pred cchhhhcccchhhhhhhh-----hhhHHHHHHhhhcccccchhhhhhhccCCEEEEecC---cCcccChhhhHHHHHHHH
Confidence 577888888888777663 355678888877766655555667889999999999 8999984 344455
Q ss_pred HHHhcc--CCcEEEEe------CCCCcCCCC---hhhHHHHHHHHHHh
Q 007311 571 AKAFEE--GCSVIIEH------DCGHIIPTR---SPYIDEIKSFLQRF 607 (608)
Q Consensus 571 ~~~~~~--~~~~vv~~------~gGH~ip~~---~~~~~~i~~Fl~~~ 607 (608)
.+.+.. ..++++.. +.||++..+ .+..+.|.+||++.
T Consensus 269 ~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 269 IDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 565553 23555553 358996443 24678899999874
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=98.07 E-value=2.4e-06 Score=85.97 Aligned_cols=51 Identities=22% Similarity=0.170 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.++..+.|.++++..+ ....|+||||||.++..++.+. +..++.+|++++.
T Consensus 62 ~~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~-----p~~v~~vv~i~~p 113 (319)
T d1cvla_ 62 GEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVA-----PQLVASVTTIGTP 113 (319)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHC-----ccccceEEEECCC
Confidence 3455566666776665 4558999999999999999854 4578899999874
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.06 E-value=2.8e-05 Score=79.17 Aligned_cols=129 Identities=9% Similarity=-0.054 Sum_probs=78.9
Q ss_pred ccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------
Q 007311 473 QTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------- 538 (608)
+.++...+++||.+.....+ ...+|+|.|-||.+|+.++....+......+.++++...+......
T Consensus 161 ~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 240 (358)
T d1jkma_ 161 GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSL 240 (358)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHH
T ss_pred hhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchhhcccccch
Confidence 34566677777766544433 4557999999999999988765432223456777777654322100
Q ss_pred --------------------------cc------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--C
Q 007311 539 --------------------------FE------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--C 578 (608)
Q Consensus 539 --------------------------~~------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~ 578 (608)
.. ...---|+|+++|+ .|..+ ..+.++++.++.. .
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~---~D~l~--~e~~~~~~~L~~aGv~ 315 (358)
T d1jkma_ 241 VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNE---LDPLR--DEGIAFARRLARAGVD 315 (358)
T ss_dssp HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEET---TCTTH--HHHHHHHHHHHHTTCC
T ss_pred hcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECC---CCCCH--HHHHHHHHHHHHCCCc
Confidence 00 00111389999999 89654 5677777777753 3
Q ss_pred cEEEEeCC-CCcC----CC-Ch----hhHHHHHHHHHH
Q 007311 579 SVIIEHDC-GHII----PT-RS----PYIDEIKSFLQR 606 (608)
Q Consensus 579 ~~vv~~~g-GH~i----p~-~~----~~~~~i~~Fl~~ 606 (608)
++++++++ +|.+ .. .+ ..++.|..||.+
T Consensus 316 v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~ 353 (358)
T d1jkma_ 316 VAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAAD 353 (358)
T ss_dssp EEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHH
Confidence 56666665 8953 11 11 245667777764
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.04 E-value=1e-05 Score=84.07 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=81.8
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-------------------------------------
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------------------------------------- 537 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------------------------------------- 537 (608)
++++|+|.||++++.+|. ..++.++++|..++......
T Consensus 197 VGm~G~SY~G~~q~~aA~-----~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (405)
T d1lnsa3 197 VAMTGKSYLGTMAYGAAT-----TGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFL 271 (405)
T ss_dssp EEEEEETHHHHHHHHHHT-----TTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHH
T ss_pred eEEEecCHHHHHHHHHHh-----cCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhh
Confidence 589999999999999887 33667999998877653200
Q ss_pred ---------------------------------ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-CcEEEE
Q 007311 538 ---------------------------------EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-CSVIIE 583 (608)
Q Consensus 538 ---------------------------------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-~~~vv~ 583 (608)
.....+|++|+|+|+|- +|..++...+.++++.++.. ...++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw---~D~~v~~~~~~~~y~al~~~~~~~Lil 348 (405)
T d1lnsa3 272 KGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGL---QDWNVTPEQAYNFWKALPEGHAKHAFL 348 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEET---TCCSSCTHHHHHHHHHSCTTCCEEEEE
T ss_pred hchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEec---cCCCCCHHHHHHHHHHHHhCCCcEEEE
Confidence 01345789999999999 89999988889998888643 367888
Q ss_pred eCCCCcCCCC---hhhHHHHHHHHHHhC
Q 007311 584 HDCGHIIPTR---SPYIDEIKSFLQRFL 608 (608)
Q Consensus 584 ~~gGH~ip~~---~~~~~~i~~Fl~~~L 608 (608)
++++|..+.. .++.+.+.+||..+|
T Consensus 349 gpw~H~~~~~~~~~d~~~~~~~wFD~~L 376 (405)
T d1lnsa3 349 HRGAHIYMNSWQSIDFSETINAYFVAKL 376 (405)
T ss_dssp ESCSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred eCCCCCCCcccccchHHHHHHHHHHHHh
Confidence 9999987643 246788888998765
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.95 E-value=5.6e-06 Score=82.03 Aligned_cols=50 Identities=20% Similarity=0.166 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 478 DVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
++..+.|.+++...+ ....|+||||||.++..++.+. +..++.+|.+++.
T Consensus 58 ~~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~-----p~~v~~lv~i~tP 108 (285)
T d1ex9a_ 58 EQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVR-----PDLIASATSVGAP 108 (285)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHC-----CccceeEEEECCC
Confidence 344455666665555 4568999999999999998854 4579999999875
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=97.86 E-value=1.6e-05 Score=80.02 Aligned_cols=62 Identities=21% Similarity=0.166 Sum_probs=39.7
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-CcEEEEeCCCCcCCCC---------------hhhHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-CSVIIEHDCGHIIPTR---------------SPYIDEIKSFLQ 605 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-~~~vv~~~gGH~ip~~---------------~~~~~~i~~Fl~ 605 (608)
.++++|+|+++|. .|..++ .+.++++.++.. ...++..+.+|..+.. ....+...+||.
T Consensus 241 ~~i~vP~L~i~G~---~D~~~~--~~~~~~~~~~~~~~~~liigpw~H~~~~~~~~~~~~g~~~~~~~~~~~~~~l~wfD 315 (347)
T d1ju3a2 241 GGLATPALITAGW---YDGFVG--ESLRTFVAVKDNADARLVVGPWSHSNLTGRNADRKFGIAATYPIQEATTMHKAFFD 315 (347)
T ss_dssp TTCCCCEEEEEEE---ECTTHH--HHHHHHHHHTTTSCEEEEEEEEESSCCSSEETTEECCGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCCEEEeccc---cCCCcc--hhHHHHHHhhccCCceEEEcCccccCcccccCCCCCCccccccHHHHHHHHHHHHH
Confidence 5789999999999 887654 345566665542 3556665556653211 123456788888
Q ss_pred HhC
Q 007311 606 RFL 608 (608)
Q Consensus 606 ~~L 608 (608)
.+|
T Consensus 316 ~~L 318 (347)
T d1ju3a2 316 RHL 318 (347)
T ss_dssp HHT
T ss_pred HHh
Confidence 765
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=97.83 E-value=0.00015 Score=69.42 Aligned_cols=102 Identities=12% Similarity=0.010 Sum_probs=65.8
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------cccCCCCCCEEEEEcCCC-----CCCc
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------FEHRSINCPSLHIFGGDL-----GNDR 560 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------~~~~~i~~PvL~i~G~~~-----~~D~ 560 (608)
.+|.|+|+||.+++.++.. ...+..++++|+....... ........|+++.+|+++ ..|.
T Consensus 143 ~~i~G~S~GG~~a~~~~~~------~~~f~~~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~ 216 (265)
T d2gzsa1 143 RGLWGHSYGGLFVLDSWLS------SSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHA 216 (265)
T ss_dssp EEEEEETHHHHHHHHHHHH------CSSCSEEEEESGGGSTTHHHHHHHHHTSCTTTTTTCEEEEEECCC----------
T ss_pred eEEEeccHHHHHHHHHHHc------CcccCEEEEECCcccccchhhhhccccccccccCCCcEEEEcCCccccccccccc
Confidence 3689999999999986652 3467788888876543321 123456688999999831 1266
Q ss_pred ccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCChhhHHHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~ 606 (608)
.++.+..+++.+.+... ..++.++++ +|.. -....+.+.|+.
T Consensus 217 ~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~----~~~~s~~~~l~~ 261 (265)
T d2gzsa1 217 VGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP----MFNASFRQALLD 261 (265)
T ss_dssp -CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH----HHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHCCCCEEEEEcCCCCcch----HHHHHHHHHHHH
Confidence 77888899999888743 356677776 8963 123445555544
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=97.77 E-value=7.2e-06 Score=70.80 Aligned_cols=37 Identities=11% Similarity=-0.039 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHH
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~ 513 (608)
.++..+.+.++++..+ ....|+|+|+||++|+.++.+
T Consensus 62 ~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~ 99 (122)
T d2dsta1 62 PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEAL 99 (122)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHT
T ss_pred cchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhh
Confidence 4556677777887754 445899999999999999883
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=97.77 E-value=5.6e-05 Score=72.61 Aligned_cols=64 Identities=14% Similarity=0.012 Sum_probs=45.6
Q ss_pred hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------cccCCCCCCEEEEEcCCC
Q 007311 491 EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------FEHRSINCPSLHIFGGDL 556 (608)
Q Consensus 491 ~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------~~~~~i~~PvL~i~G~~~ 556 (608)
.....+|.|+||||.+|+.+|.+. +..++.++.+||....... ........++++..|+
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~-----pd~f~a~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-- 214 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNC-----LDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGS-- 214 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHH-----TTTCCEEEEESCCCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEET--
T ss_pred CccceEEEeeCCcchhhhhhhhcC-----CCcceEEEEeCcccccCCCcccccccchhhhhhhhhcccceEEEEecCC--
Confidence 334568999999999999999865 5679999999997754321 1233445667777887
Q ss_pred CCCccc
Q 007311 557 GNDRQV 562 (608)
Q Consensus 557 ~~D~~V 562 (608)
.|..+
T Consensus 215 -~~~~~ 219 (273)
T d1wb4a1 215 -EDIAY 219 (273)
T ss_dssp -TCTTH
T ss_pred -CCccc
Confidence 56544
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=97.74 E-value=3.7e-05 Score=77.13 Aligned_cols=92 Identities=16% Similarity=0.101 Sum_probs=63.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCcc-EEEEecCCCCCccc-------------------------------ccc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFR-FAILCSGFALHSAE-------------------------------FEH 541 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~-~vIlisG~~~~~~~-------------------------------~~~ 541 (608)
.+.|.|+|.||.||+.++..+ +..++ ++-.++|.+..... ...
T Consensus 12 rI~V~G~SsGG~mA~~la~a~-----sd~f~aga~vvAg~p~~ca~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 86 (318)
T d2d81a1 12 SVSVSGLASGGYMAAQLGVAY-----SDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASVA 86 (318)
T ss_dssp EEEEEEETHHHHHHHHHHHHT-----TTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCGG
T ss_pred ceEEEEECHHHHHHHHHHHhc-----ccceeeeEEEeccCchhhhcccchHHHhhcCCCCCcChhHHHHHHhhcCCcchh
Confidence 457999999999999999854 45565 44444443211100 012
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC----CcEEEE-eCCCCcCCCC
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG----CSVIIE-HDCGHIIPTR 593 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~----~~~vv~-~~gGH~ip~~ 593 (608)
.....|++++||+ +|.+||+..++++++.++.. .+..+. .+.||.+|++
T Consensus 87 ~~~~~pvll~hG~---~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 87 NLGQRKIYMWTGS---SDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGGGCEEEEEEET---TCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred ccCCCCEEEEecC---CCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCC
Confidence 2356899999999 89999999999999998742 234344 4569998763
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=97.65 E-value=0.00018 Score=73.70 Aligned_cols=55 Identities=13% Similarity=0.063 Sum_probs=38.0
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
..+..++++++.+.-.-....++++|+|.||.+++.+|. ..+..++.+|..++..
T Consensus 124 ~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~-----~~~~~l~a~v~~~~~~ 178 (381)
T d1mpxa2 124 ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALT-----NPHPALKVAVPESPMI 178 (381)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHT-----SCCTTEEEEEEESCCC
T ss_pred HHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHh-----ccccccceeeeecccc
Confidence 345666666665542112235689999999999988887 3456788888877654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.61 E-value=4.3e-05 Score=75.12 Aligned_cols=53 Identities=17% Similarity=0.222 Sum_probs=37.7
Q ss_pred cHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 476 GLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.+.+.++.+.+.|.+. .....++||||||.++-.++.+. +..+++-+|.+++.
T Consensus 60 ~~~~~~e~v~~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~----~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 60 NVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRC----PSPPMVNLISVGGQ 115 (279)
T ss_dssp CHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHC----CSSCEEEEEEESCC
T ss_pred hHHHHHHHHHHHHHhccccccceeEEEEccccHHHHHHHHHc----CCCCcceEEEECCC
Confidence 3556666666666542 23357999999999998888753 24568889998864
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=96.47 E-value=0.0072 Score=61.15 Aligned_cols=54 Identities=13% Similarity=-0.001 Sum_probs=36.0
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
..+..+++++|.+.-.-....++++|+|.||.+++.+|. ..++.++.+|..++.
T Consensus 129 ~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~-----~~~~~l~a~~~~~~~ 182 (385)
T d2b9va2 129 TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALL-----DPHPALKVAAPESPM 182 (385)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHT-----SCCTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHh-----ccCCcceEEEEeccc
Confidence 345666666664432112234689999999999998887 335668888876654
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=96.34 E-value=0.0041 Score=62.05 Aligned_cols=39 Identities=13% Similarity=-0.003 Sum_probs=30.3
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA 537 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~ 537 (608)
....|+|||+||.||..++.+. ..++.++.+-++.|...
T Consensus 146 ~~vhlIGhSLGAhvAG~aG~~~------~~l~rItgLDPA~P~F~ 184 (337)
T d1rp1a2 146 SQVQLIGHSLGAHVAGEAGSRT------PGLGRITGLDPVEASFQ 184 (337)
T ss_dssp GGEEEEEETHHHHHHHHHHHTS------TTCCEEEEESCCCTTTT
T ss_pred hheEEEeecHHHhhhHHHHHhh------ccccceeccCCCccccC
Confidence 3457999999999998777632 35888999988887653
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.15 E-value=0.0085 Score=59.66 Aligned_cols=40 Identities=13% Similarity=-0.066 Sum_probs=32.0
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA 537 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~ 537 (608)
....|+|||+||-||-.+.... ..+++.++.+-++.|...
T Consensus 146 ~~vhlIGhSLGAhiaG~ag~~l-----~~kigrItgLDPA~P~F~ 185 (338)
T d1bu8a2 146 ENVHLIGHSLGAHVVGEAGRRL-----EGHVGRITGLDPAEPCFQ 185 (338)
T ss_dssp GGEEEEEETHHHHHHHHHHHHT-----TTCSSEEEEESCBCTTTT
T ss_pred ceeEEEeccHHHHHHHHHHHhh-----ccccccccccccCcCccc
Confidence 3457999999999999998855 346889999988887653
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.81 E-value=0.096 Score=47.75 Aligned_cols=58 Identities=17% Similarity=0.080 Sum_probs=40.6
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
..+...+...|.....+-. ...+|+||||||.|+-.++..... ....++.++|+++-.
T Consensus 76 ~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 76 SAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDS-AIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCH-HHHTTEEEEEEESCT
T ss_pred hHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCCh-hhhhhEEEEEEEeCC
Confidence 3567777777777766643 456899999999999887764321 113468888888843
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.74 E-value=0.018 Score=60.26 Aligned_cols=57 Identities=23% Similarity=0.140 Sum_probs=44.0
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
-+...+++||++.|..-| ..+.|+|+|-||+.+..++... .....++.+|+.||...
T Consensus 172 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 172 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSP---LAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---GGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhh---hccCcchhhhhhccccc
Confidence 456778899999998864 3456999999999888877633 23557999999998754
|
| >d1ulra_ d.58.10.1 (A:) Acylphosphatase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Acylphosphatase/BLUF domain-like family: Acylphosphatase-like domain: Acylphosphatase species: Thermus thermophilus [TaxId: 274]
Probab=94.26 E-value=0.044 Score=43.28 Aligned_cols=52 Identities=25% Similarity=0.341 Sum_probs=47.8
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
+|.+.+..+.+++|+|.|+=-+.| |=..+.|+.+++++|+++|+..|..+.+
T Consensus 16 FR~~~~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 68 (87)
T d1ulra_ 16 YRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLKQGPRLARV 68 (87)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHHHCSTTCEE
T ss_pred CHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 789999999999999999999999 8889999999999999999998877644
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=94.26 E-value=0.016 Score=60.75 Aligned_cols=60 Identities=28% Similarity=0.148 Sum_probs=43.0
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
-+...+++||++-|..-| ..+.|+|+|-||+.+..++.... ......|..+|+.||..+.
T Consensus 160 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~-~~~~gLF~raI~qSg~~~~ 222 (517)
T d1ukca_ 160 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYG-GKDEGLFIGAIVESSFWPT 222 (517)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGG-TCCCSSCSEEEEESCCCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccc-cccccccceeeeccccccc
Confidence 356778999999998864 34569999999998765554221 0123479999999997653
|
| >d1w2ia_ d.58.10.1 (A:) Acylphosphatase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Acylphosphatase/BLUF domain-like family: Acylphosphatase-like domain: Acylphosphatase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.19 E-value=0.029 Score=44.66 Aligned_cols=53 Identities=21% Similarity=0.254 Sum_probs=48.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.|.++.+.+|+|+|.|+=-..| |-..+.|+.+.++.|++++++.|.++.+
T Consensus 17 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 70 (90)
T d1w2ia_ 17 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQGPPLARV 70 (90)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTTTCSTTCEE
T ss_pred CChHHHHHHHHHcCCeEEEEECCCCCEEEEEECCHHHHHHHHHHHHhCcCCcEE
Confidence 3799999999999999999999999 9999999999999999999988877644
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=93.90 E-value=0.077 Score=55.76 Aligned_cols=59 Identities=25% Similarity=0.211 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhh---hhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWER---LKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~---~~~~~~l~~vIlisG~~ 533 (608)
.+...+++||++.|..-| ..+.|+|+|-||+.+..+++.... ......|+.+|+.||..
T Consensus 188 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 188 HDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 456788999999998864 345699999999888776653211 01124689999999864
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.44 E-value=0.51 Score=47.47 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhHhC------CceEEEecChhHHHHHHHHHHHhhh-hCCCCccEEEEecCCCCC
Q 007311 478 DVSLAYLKTIFSQEG------PFDGILGFSQGAAMAASVCAQWERL-KGEIDFRFAILCSGFALH 535 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~------~~~~IlGFSQGa~vAl~la~~~~~~-~~~~~l~~vIlisG~~~~ 535 (608)
++..+.|..++.... ....|.|=|-||.-+-.+|....+. .....++|+++-+|+..+
T Consensus 117 ~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~dp 181 (421)
T d1wpxa1 117 KDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp HHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCCH
T ss_pred HHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCcccc
Confidence 344555555555422 1237999999999998888765431 224679999998888754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=93.29 E-value=0.039 Score=57.95 Aligned_cols=59 Identities=20% Similarity=0.194 Sum_probs=40.9
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhh---hhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWER---LKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~---~~~~~~l~~vIlisG~~ 533 (608)
-+...+++|+++-|..-| ..+.|+|+|-||+.+...++.... +....-|..+|+.||..
T Consensus 180 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 180 KDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 356678899999998854 445699999999977655542210 01123589999999864
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=92.90 E-value=0.073 Score=55.61 Aligned_cols=57 Identities=25% Similarity=0.118 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
-+...+++|+++.|..-| ..+.|+|+|-||+.+..++.... ....|..+|+.||...
T Consensus 168 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~---~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 168 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG---SRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHH---HHTTCSEEEEESCCTT
T ss_pred hhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCcc---chhhhhhheeeccccc
Confidence 456778999999998864 34569999999998887766432 2356999999998764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=92.84 E-value=0.037 Score=57.19 Aligned_cols=58 Identities=22% Similarity=0.152 Sum_probs=45.1
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
.+...+++||++.|..-| ..+.|+|+|-||+.+..++..- .....|..+|+.||....
T Consensus 159 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---~~~gLF~raI~~SGs~~~ 219 (483)
T d1qe3a_ 159 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMP---AAKGLFQKAIMESGASRT 219 (483)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCG---GGTTSCSEEEEESCCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhccc---ccCCcceeeccccCCccc
Confidence 456778999999999864 4456999999999988877632 234579999999998654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.51 E-value=0.47 Score=47.95 Aligned_cols=53 Identities=9% Similarity=0.061 Sum_probs=35.1
Q ss_pred HHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 480 SLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 480 s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.++.|.+++... .....|.|=|-||.-+-.+|....+ .....++++++.+|+.
T Consensus 125 ~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~-~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 125 NFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ-DPSMNLQGLAVGNGLS 181 (452)
T ss_dssp HHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTT-CTTSCEEEEEEESCCS
T ss_pred HHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHh-cCcccccceEcCCCcc
Confidence 345555666543 2234799999999988888865432 2346778888777764
|
| >d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Acylphosphatase/BLUF domain-like family: Acylphosphatase-like domain: Acylphosphatase species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.33 E-value=0.12 Score=41.58 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=48.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh-CCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS-ISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~-~~~f~~~ 79 (608)
.+|.|.++.+..|+|+|.|+=-+.| |=+.+-|+.++++.|+++|.. .|..+.+
T Consensus 21 GFR~~v~~~A~~l~L~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~gp~~a~V 75 (98)
T d2acya_ 21 FFRKYTQAEGKKLGLVGWVQNTDQGTVQGQLQGPASKVRHMQEWLETKGSPKSHI 75 (98)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHTCSTTCEE
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhcCCCCcEE
Confidence 5799999999999999999999999 999999999999999999974 6777654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=92.25 E-value=0.068 Score=56.47 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
-+...+++||++.|..-| ..+.|+|+|-||+.+..++... .....++.+|+.||...
T Consensus 207 ~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp---~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 207 WDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP---VTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT---TTTTSCCEEEEESCCTT
T ss_pred hHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccc---cccccccccceeccccc
Confidence 456778899999988854 4456999999999988776632 23457999999998654
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.06 E-value=0.13 Score=53.53 Aligned_cols=56 Identities=21% Similarity=0.166 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
-+...+++||++.|..-| ..+.|+|+|-||+.+..++.... ....|..+|+.||..
T Consensus 174 ~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~---~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 174 LDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP---SRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHH---HHTTCSEEEEESCCS
T ss_pred ccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhh---hhHHhhhheeecccc
Confidence 456778999999998864 34569999999999998776432 235799999999865
|
| >d1urra_ d.58.10.1 (A:) Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Acylphosphatase/BLUF domain-like family: Acylphosphatase-like domain: Acylphosphatase 2 (Cg18505) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=92.00 E-value=0.14 Score=40.95 Aligned_cols=53 Identities=11% Similarity=0.048 Sum_probs=47.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh-CCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS-ISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~-~~~f~~~ 79 (608)
.+|.|.+..|..|+|+|-|+=-+.| |=+.+-|+.+++++|+++|++ .|..+.+
T Consensus 20 GFR~~~~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~~p~~a~V 74 (97)
T d1urra_ 20 FFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENNRIPNAKV 74 (97)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHCCSTTCEE
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCCcEE
Confidence 4799999999999999999999999 999999999999999999987 4556543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.71 E-value=0.33 Score=48.75 Aligned_cols=39 Identities=18% Similarity=-0.008 Sum_probs=28.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhh--------------------hCCCCccEEEEecCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERL--------------------KGEIDFRFAILCSGF 532 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~--------------------~~~~~l~~vIlisG~ 532 (608)
.+.|+||||||..+=.++.+.+.. .+...++.++.+|+.
T Consensus 106 kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsTP 164 (388)
T d1ku0a_ 106 RVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIATP 164 (388)
T ss_dssp CEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCC
T ss_pred ceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccCC
Confidence 468999999999998888765420 123358888888865
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.86 E-value=0.12 Score=53.86 Aligned_cols=57 Identities=23% Similarity=0.112 Sum_probs=43.1
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...+++||++.|..-| ..+.|+|+|-||+.+..++... .....+..+|+.||...
T Consensus 166 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp---~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 166 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSP---GSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---GGGGGCSEEEEESCCTT
T ss_pred cchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCC---cchhhhhhhhccccccc
Confidence 456788999999998864 3456999999999987766532 22456899999998754
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=88.85 E-value=0.88 Score=41.30 Aligned_cols=39 Identities=18% Similarity=0.271 Sum_probs=27.6
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~ 512 (608)
.++..++.+.+.+...+-. ...+|+||||||.|+..++.
T Consensus 62 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 62 VNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHh
Confidence 3456666666666655533 45689999999999988765
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=88.54 E-value=0.43 Score=45.27 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=24.4
Q ss_pred HHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHh
Q 007311 481 LAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 481 ~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.+.|.+.+++... ...|.|||+||+||..++....
T Consensus 125 ~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l~ 160 (269)
T d1tiba_ 125 RQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHHH
Confidence 3334444444433 4568999999999999998765
|
| >d1apsa_ d.58.10.1 (A:) Acylphosphatase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Acylphosphatase/BLUF domain-like family: Acylphosphatase-like domain: Acylphosphatase species: Horse (Equus caballus) [TaxId: 9796]
Probab=88.51 E-value=0.12 Score=41.50 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=47.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh-CCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS-ISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~-~~~f~~~ 79 (608)
.+|.|.++.+..|+|+|-|.=-+.| |=..+-|+.+++++|+++|.. -|..+.+
T Consensus 21 GFR~~~~~~A~~~~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~gp~~a~V 75 (98)
T d1apsa_ 21 CFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWLSKVGSPSSRI 75 (98)
T ss_dssp CCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSSSSCCCSSSCC
T ss_pred CcHHHHHHHHHHcCCeEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhcCCCCcEE
Confidence 4788999999999999999999999 999999999999999999965 6777654
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.42 E-value=0.55 Score=49.24 Aligned_cols=57 Identities=21% Similarity=0.112 Sum_probs=43.6
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
-+...+++||++-|..-| ..+.|+|+|-||+.+..++... .....|+.+|+.||...
T Consensus 165 ~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp---~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 165 WDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSP---YNKGLIKRAISQSGVGL 224 (579)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---GGTTTCSEEEEESCCTT
T ss_pred hHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhh---cccCccccceeccCCcc
Confidence 346678999999998864 4456999999999888776632 23567999999998653
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=87.51 E-value=1.5 Score=39.51 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=26.7
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~ 512 (608)
.++..++.+.|.+...+-. ...+|+||||||.|+..++.
T Consensus 62 ~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 62 AQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHh
Confidence 3455556665655555533 34589999999999987764
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=87.35 E-value=0.5 Score=44.88 Aligned_cols=34 Identities=26% Similarity=0.234 Sum_probs=23.3
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.|.+.+.+.. ....|.|||+||+||..+++...
T Consensus 125 ~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l~ 159 (271)
T d1tiaa_ 125 KELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (271)
T ss_pred HHHHHHHHhCCCceEEEeccchHHHHHHHHHHHHH
Confidence 33444444433 23468899999999999988764
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=87.27 E-value=0.68 Score=43.76 Aligned_cols=33 Identities=15% Similarity=0.002 Sum_probs=23.1
Q ss_pred HHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 483 YLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 483 ~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.|.+.+.+.. ....|.|||+||+||..++....
T Consensus 122 ~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l~ 155 (265)
T d1lgya_ 122 VVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLY 155 (265)
T ss_dssp HHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCceEEEEecccchHHHHHHHHHHH
Confidence 3444444444 34468899999999999998654
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=86.92 E-value=0.69 Score=43.66 Aligned_cols=34 Identities=21% Similarity=0.065 Sum_probs=23.2
Q ss_pred HHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 482 AYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 482 ~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
..|.+.+.+.. ....|.|||+||+||..++....
T Consensus 120 ~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l~ 154 (265)
T d3tgla_ 120 ATVLDQFKQYPSYKVAVTGHSLGGATVLLCALDLY 154 (265)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEecccchHHHHHHHHHHHH
Confidence 33444444443 34468899999999999887653
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=85.56 E-value=0.8 Score=43.13 Aligned_cols=32 Identities=38% Similarity=0.256 Sum_probs=22.5
Q ss_pred HHHHHhHhCC-ceEEEecChhHHHHHHHHHHHh
Q 007311 484 LKTIFSQEGP-FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 484 L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.+.+.+... ...|.|||+||++|..++....
T Consensus 115 i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l~ 147 (261)
T d1uwca_ 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQLS 147 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcceEEeccchhHHHHHHHHHHHH
Confidence 3333333333 3468899999999999998765
|
| >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Dual specificity phosphatase-like domain: Putative phosphatase At1g05000 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=84.95 E-value=0.64 Score=39.71 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=22.5
Q ss_pred cCCCeEEEEcCCCc-cHHHHHHHHHhcCCCC
Q 007311 204 LQGKHVLMYCTGGI-RCEMASAYVRSKGAGF 233 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf 233 (608)
.++.+|+++|+.|. |+..+++.++.. .|.
T Consensus 90 ~~~~pvlvHC~~GkdRTG~v~a~~l~~-~g~ 119 (151)
T d1xria_ 90 EKNHPVLIHCKRGKHRTGCLVGCLRKL-QKW 119 (151)
T ss_dssp GGGCSEEEECSSSSSHHHHHHHHHHHH-TTB
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHH-cCC
Confidence 46779999999995 888888777664 465
|
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Dual specificity phosphatase-like domain: mRNA capping enzyme, triphosphatase domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.71 E-value=1.1 Score=40.12 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=45.6
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh------hhhhc-----cccCCCCccccCcccccCCCchHHH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL------YETRI-----GKFRTPSVETLDPEIRQFSDLPTWI 197 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~------~E~~~-----Gh~~g~~~~~l~~~~~~~~~~~~~~ 197 (608)
....++.++.++++.. ..+...+||+.+. .+++. -|++.+... ..|....+..|-..+
T Consensus 38 ~~~~~~~~v~~~~~~~----------~~~~~~vinlt~~~~~Y~~~~~~~~gi~~~~~~~~~~~-~~P~~~~~~~f~~~v 106 (194)
T d1i9sa_ 38 ENRFHPSMLSNYLKSL----------KVKMSLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHG-ECPTTENTETFIRLC 106 (194)
T ss_dssp GGCCCHHHHHHHHHHT----------TCCEEEEEECSSCSSSSCTHHHHTTTCEEEECCCCCTT-CCCCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhh----------CCCceEEEEccCCCCCcCHHHHHhcCceEEEecCCCCC-CCCChHHHHHHHHHH
Confidence 4456788888877653 1245679999753 23331 112111000 012111112222223
Q ss_pred HhhhhhcCCCeEEEEcCCCc-cHH-HHHHHHHhcCCCC
Q 007311 198 DNNAEQLQGKHVLMYCTGGI-RCE-MASAYVRSKGAGF 233 (608)
Q Consensus 198 ~~~~~~~k~k~Iv~yCtgGi-R~~-~a~~~L~~~~~Gf 233 (608)
+...+...+..|+++|.+|+ |+. .+++||..+ .|+
T Consensus 107 ~~~~~~~~~~~V~VHC~~G~~Rsg~~i~ayL~~~-~~~ 143 (194)
T d1i9sa_ 107 ERFNERSPPELIGVHCTHGFNRTGFLICAFLVEK-MDW 143 (194)
T ss_dssp TTC-----CCEEEEECSSSSHHHHHHHHHHHHHH-HCC
T ss_pred HHHHHhCCCCeEEEECCCCCCccHHHHHHHHHHH-cCC
Confidence 33233345779999999885 666 567777654 255
|