Citrus Sinensis ID: 007319

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------61
MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
cccccccccHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccccccHHHHHHccHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHcccEEEccccccccccccccccccccccccHHHHccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHccccEEEEEEcccccccccccccccHHHHHHcccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHcccccEEEEEccccccccccHHHHHccccEEEEHHHHHHHHHHcccccccccccEEccccccccccccccHHHHHccccccEEEEccHHHHccEEcccccccccccccccccccccEEEEEcccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEccc
ccccHHEccHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHEEEEEEEEccccHHcccccccccccHHHHHHHHHHHccccccHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHHHccEEEEcccHHEEcccccccccEEEEcccEEEEEEEccccccccccccccEEEEEEccccccccccEEEHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEEEEcccccccccEEccHHHHHHHHcccEEEEEEEcccEEEccccccccHHHHHHcccccccccccccccccccccEEEEEEcccccccccEEEcccHHHHHHHHHHHHEccccccEEEEEccEEEEcccEEEEcccccccEEEEEccccccHHHHHHHHHcccEEEEccHHHHHHHHHccccccccHHHHHEEccccccccHHHHHHHHHHHccccEEEEEcEcccccEEEccccccccccccccccccccEEEEEccccccccccccccEEEEEEccccccHHHEccccccccEccccccccccccccccccccccEEEEEccc
MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKvlkpwhphglhqlVYYSVYndwdasikgpplywfpsldqskltNLGNaleihgpkllgraykdpitsfrLFQKFTVEHPEAYWEIALKEISVVFREapkcildrtdkskhggtwlpgsvlniaeccllpsnhrrkedntVAIVWREdrcdesavNLMTYKELREQVMLVANALDTMFskgdaiaidmpMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKakgiftqdfilrggrkfplyskvlgaaplkaivlpaigndvgiplreqdlswkdflssvdyhprpnyyspvynpvDAVVNILfssgttgepkaipwtqlssirctaegwahidlkvgdvycwptnlgwvmgPVILFSSFLNGATLAlyqgsplersfgkfvqdaGVTVLGTVPSLVKAWRntnclegldwtkirsfastgetsnvdddlwLSSKAWYNAIIEScggtelssAYIQgsllqpqafgafSTATMTAGLVIldecgvpypddqpcvgevglfplylgasdrllnadheevyfrgmpmykgMEAWRHHQadcrglyhctgkg
mgknirevgvedLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKvlkpwhphglHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCIldrtdkskhggtwlpgsvLNIAECCllpsnhrrkedntvAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRlrvskakgiftqdfilrggRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGtvpslvkawrntnclegldwTKIRSfastgetsnvdddLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
********GVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCT***
*********VEDLMKVGLKLEEAEEFDKILKQVIS**KGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
****IREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
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MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCRGLYHCTGKG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query608 2.2.26 [Sep-21-2011]
Q84P17 727 Probable acyl-activating yes no 0.995 0.832 0.669 0.0
F4KBF3 721 Probable acyl-activating no no 0.976 0.823 0.471 1e-152
A1U2S9 649 Acetyl-coenzyme A synthet yes no 0.611 0.573 0.278 2e-28
A8FUF1 650 Acetyl-coenzyme A synthet yes no 0.597 0.558 0.276 3e-28
Q15YI8 646 Acetyl-coenzyme A synthet yes no 0.574 0.540 0.293 6e-28
Q88EH6 653 Acetyl-coenzyme A synthet yes no 0.597 0.555 0.277 6e-28
A9KY56 650 Acetyl-coenzyme A synthet yes no 0.600 0.561 0.267 2e-27
A6WM52 650 Acetyl-coenzyme A synthet yes no 0.600 0.561 0.267 3e-27
A3D3E8 650 Acetyl-coenzyme A synthet yes no 0.600 0.561 0.267 3e-27
A4Y7Y7 650 Acetyl-coenzyme A synthet yes no 0.601 0.563 0.262 4e-27
>sp|Q84P17|AEE18_ARATH Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1 Back     alignment and function desciption
 Score =  858 bits (2217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/612 (66%), Positives = 491/612 (80%), Gaps = 7/612 (1%)

Query: 1   MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
           M K+I E+  +D +K GL LE+A+EFDK++  VI+ +   D R+ W+ LV   VLKPWHP
Sbjct: 1   MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60

Query: 61  HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
           H LHQL+YYSVY++WD+S+ GPPLYWFPSL QSK TNLG  +E HGP+LLG +YK+P+ S
Sbjct: 61  HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120

Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
           F LF++F+VEHPE YW   + E+S+VF   P+CIL+   KSK  GTWLP +VLNIAECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177

Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
           +PS+H +KED++VA+VWR +  D+S VN MT KELREQVMLVANA+   F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237

Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
           PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297

Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVV 359
           S+V+ AAP K IVLPA G ++ + LREQD+SW DFLS+   H    NYY P+Y PV++V+
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357

Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
           NILFSSGTTGEPKAIPWTQLS IR   +GWAH+D++VG  YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417

Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
           L GATLALY GSPL R FGKFVQDAGVTVLGTVPSLVK W+ TNC+EGL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477

Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
           GE SNVDD LWLSSKA Y  +IE CGGTEL+S+YI GS LQPQAFGAFST +MT  ++I 
Sbjct: 478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537

Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCR 599
           DE GVPYPDDQPC GEVGLFP +LGA+DRLLNA+H+EVYF+GMPMYK     RH     R
Sbjct: 538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYKETRLRRHGDIVKR 597

Query: 600 ---GLYHCTGKG 608
              G Y+  G+ 
Sbjct: 598 TVGGYYNVQGRA 609
May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|F4KBF3|AAE17_ARATH Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1 Back     alignment and function description
>sp|A1U2S9|ACSA_MARAV Acetyl-coenzyme A synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A8FUF1|ACSA_SHESH Acetyl-coenzyme A synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|Q15YI8|ACSA_PSEA6 Acetyl-coenzyme A synthetase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|Q88EH6|ACSA1_PSEPK Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1 Back     alignment and function description
>sp|A9KY56|ACSA_SHEB9 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS195) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A6WM52|ACSA_SHEB8 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS185) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A3D3E8|ACSA_SHEB5 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A4Y7Y7|ACSA_SHEPC Acetyl-coenzyme A synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=acsA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query608
225435726 727 PREDICTED: acetyl-coenzyme A synthetase 0.975 0.815 0.740 0.0
380042388 727 acyl-activating enzyme 14 [Cannabis sati 0.968 0.810 0.743 0.0
380042368 723 acyl-activating enzyme 4, partial [Canna 0.993 0.835 0.714 0.0
380042386 715 acyl-activating enzyme 13 [Cannabis sati 0.950 0.808 0.710 0.0
449503439 725 PREDICTED: probable acyl-activating enzy 0.972 0.815 0.679 0.0
449448834 725 PREDICTED: probable acyl-activating enzy 0.972 0.815 0.679 0.0
449503441 725 PREDICTED: probable acyl-activating enzy 0.972 0.815 0.672 0.0
449448832 725 PREDICTED: probable acyl-activating enzy 0.972 0.815 0.671 0.0
145336784 727 acyl-activating enzyme 18 [Arabidopsis t 0.995 0.832 0.669 0.0
12323178 2655 acetyl-CoA synthetase, putative; 45051-3 0.990 0.226 0.667 0.0
>gi|225435726|ref|XP_002285701.1| PREDICTED: acetyl-coenzyme A synthetase [Vitis vinifera] gi|297746451|emb|CBI16507.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/593 (74%), Positives = 512/593 (86%)

Query: 1   MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
           MG  + EVGV +L+K GL +EEA+EF++ILK  +  ++G D  E+WRE+VAR+VL P HP
Sbjct: 1   MGMRVAEVGVGELVKAGLSMEEAQEFERILKAAVGGARGSDPSEVWREVVARRVLSPSHP 60

Query: 61  HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
           HGLH+LV++SVY +WD SI+GPPLYWFPSL +S  TNLG  +E +GP+LLG +YKDPITS
Sbjct: 61  HGLHRLVFHSVYAEWDESIRGPPLYWFPSLYESMHTNLGRLMETYGPRLLGLSYKDPITS 120

Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
           + LFQKF+V++ E YW + LKE+SV+F  AP+CILD TDKSKHGGTWLPG+VLNIAECCL
Sbjct: 121 YSLFQKFSVQNLEVYWSMVLKELSVLFHRAPRCILDTTDKSKHGGTWLPGAVLNIAECCL 180

Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
           LP ++ RK DN++A+VWR++  D+S VN +T KELREQVM+VAN LD  FSKGDAIAIDM
Sbjct: 181 LPVSYPRKHDNSLAVVWRDEGNDDSPVNRLTLKELREQVMMVANVLDATFSKGDAIAIDM 240

Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
           PMTV AVIIYLAI+LAG+VVVSIADSFAA+EIATRL VSKAKGIFTQDFI+RGGRKFPLY
Sbjct: 241 PMTVHAVIIYLAIVLAGFVVVSIADSFAAKEIATRLHVSKAKGIFTQDFIVRGGRKFPLY 300

Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
           S+V+ AAP K IVLPAIG DV + LREQDLSWKDFLS  D+ PRPN YSPVY P+DAV N
Sbjct: 301 SRVVEAAPHKVIVLPAIGTDVDVQLREQDLSWKDFLSHADHLPRPNNYSPVYQPIDAVTN 360

Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420
           ILFSSGTTG+PKAIPWTQ+S IR +A+ WA I+++VGDV+CWPTNLGWVMGP IL++SFL
Sbjct: 361 ILFSSGTTGDPKAIPWTQVSPIRSSADAWAQINIQVGDVFCWPTNLGWVMGPTILYASFL 420

Query: 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
            GA LALY GSPL+R FGKFVQDAGVTVLGTVPSLVK W+NT C+EGLDWTKI+SFASTG
Sbjct: 421 TGAALALYHGSPLDRGFGKFVQDAGVTVLGTVPSLVKTWKNTGCMEGLDWTKIKSFASTG 480

Query: 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540
           ETSNVDDDLWLSS+A+Y  IIE CGGTEL+S+YIQGS+LQPQAFG FSTA MT G VILD
Sbjct: 481 ETSNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGSVLQPQAFGTFSTAAMTTGFVILD 540

Query: 541 ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRH 593
           E GVPYPDDQPCVGEVGLFPL +GA+D LLNADHEEVYF+GMPMYKGM   RH
Sbjct: 541 ENGVPYPDDQPCVGEVGLFPLIMGATDWLLNADHEEVYFKGMPMYKGMHLRRH 593

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|380042388|gb|AFD33358.1| acyl-activating enzyme 14 [Cannabis sativa] Back     alignment and taxonomy information
>gi|380042368|gb|AFD33348.1| acyl-activating enzyme 4, partial [Cannabis sativa] Back     alignment and taxonomy information
>gi|380042386|gb|AFD33357.1| acyl-activating enzyme 13 [Cannabis sativa] Back     alignment and taxonomy information
>gi|449503439|ref|XP_004162003.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448834|ref|XP_004142170.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449503441|ref|XP_004162004.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448832|ref|XP_004142169.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|145336784|ref|NP_175929.3| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|75297963|sp|Q84P17.1|AEE18_ARATH RecName: Full=Probable acyl-activating enzyme 18, peroxisomal gi|29893268|gb|AAP03028.1| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|332195104|gb|AEE33225.1| acyl-activating enzyme 18 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12323178|gb|AAG51574.1|AC027034_20 acetyl-CoA synthetase, putative; 45051-31547 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query608
TAIR|locus:2035721 727 AAE18 "acyl-activating enzyme 0.993 0.830 0.671 4.3e-228
TAIR|locus:2178277 721 AAE17 "acyl-activating enzyme 0.975 0.822 0.475 1e-146
TIGR_CMR|BA_2553 646 BA_2553 "acetoacetyl-CoA synth 0.764 0.719 0.272 1.1e-34
DICTYBASE|DDB_G0277815 674 acsA "acetyl-CoA synthetase" [ 0.644 0.581 0.254 2.4e-26
TIGR_CMR|CPS_3955 648 CPS_3955 "acetyl-CoA synthetas 0.616 0.578 0.265 1.7e-25
TIGR_CMR|SO_2743 650 SO_2743 "acetyl-coenzyme A syn 0.595 0.556 0.266 1.7e-24
TIGR_CMR|SPO_1813 654 SPO_1813 "acetyl-coenzyme A sy 0.777 0.723 0.257 1.8e-24
UNIPROTKB|F1SAS2 672 ACSS1 "Uncharacterized protein 0.791 0.715 0.257 8.9e-24
UNIPROTKB|P27550 652 acs [Escherichia coli K-12 (ta 0.695 0.648 0.270 1.4e-23
MGI|MGI:1915988 682 Acss1 "acyl-CoA synthetase sho 0.754 0.673 0.249 4.3e-23
TAIR|locus:2035721 AAE18 "acyl-activating enzyme 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2201 (779.8 bits), Expect = 4.3e-228, P = 4.3e-228
 Identities = 410/611 (67%), Positives = 491/611 (80%)

Query:     1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
             M K+I E+  +D +K GL LE+A+EFDK++  VI+ +   D R+ W+ LV   VLKPWHP
Sbjct:     1 MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60

Query:    61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
             H LHQL+YYSVY++WD+S+ GPPLYWFPSL QSK TNLG  +E HGP+LLG +YK+P+ S
Sbjct:    61 HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120

Query:   121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
             F LF++F+VEHPE YW   + E+S+VF   P+CIL+   KSK  GTWLP +VLNIAECCL
Sbjct:   121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177

Query:   181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
             +PS+H +KED++VA+VWR +  D+S VN MT KELREQVMLVANA+   F KGD IAIDM
Sbjct:   178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237

Query:   241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
             PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct:   238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297

Query:   301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVV 359
             S+V+ AAP K IVLPA G ++ + LREQD+SW DFLS+   H    NYY P+Y PV++V+
Sbjct:   298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357

Query:   360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
             NILFSSGTTGEPKAIPWTQLS IR   +GWAH+D++VG  YCWPTNLGWVMGP ++FS F
Sbjct:   358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417

Query:   420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
             L GATLALY GSPL R FGKFVQDAGVTVLGTVPSLVK W+ TNC+EGL+WTKI+ FA+T
Sbjct:   418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477

Query:   480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
             GE SNVDD LWLSSKA Y  +IE CGGTEL+S+YI GS LQPQAFGAFST +MT  ++I 
Sbjct:   478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537

Query:   540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHHQADCR 599
             DE GVPYPDDQPC GEVGLFP +LGA+DRLLNA+H+EVYF+GMPMYK     RH     R
Sbjct:   538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYKETRLRRHGDIVKR 597

Query:   600 ---GLYHCTGK 607
                G Y+  G+
Sbjct:   598 TVGGYYNVQGR 608
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016874 "ligase activity" evidence=ISS
GO:0005777 "peroxisome" evidence=IDA
GO:0009850 "auxin metabolic process" evidence=IMP
TAIR|locus:2178277 AAE17 "acyl-activating enzyme 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2553 BA_2553 "acetoacetyl-CoA synthase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277815 acsA "acetyl-CoA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3955 CPS_3955 "acetyl-CoA synthetase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2743 SO_2743 "acetyl-coenzyme A synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1813 SPO_1813 "acetyl-coenzyme A synthetase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|F1SAS2 ACSS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P27550 acs [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
MGI|MGI:1915988 Acss1 "acyl-CoA synthetase short-chain family member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84P17AEE18_ARATH6, ., 2, ., 1, ., -0.66990.99500.8321yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query608
PLN03052 728 PLN03052, PLN03052, acetate--CoA ligase; Provision 0.0
PLN03051 499 PLN03051, PLN03051, acyl-activating enzyme; Provis 0.0
cd05968 474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 8e-49
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 1e-48
cd05943 616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 7e-43
PRK03584 655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 6e-40
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 3e-37
TIGR01217 652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 1e-31
TIGR02188 625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 7e-30
COG0318 534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 5e-29
cd05966 602 cd05966, ACS, Acetyl-CoA synthetase (also known as 2e-27
cd05967 607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 1e-26
PRK00174 637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 2e-25
PLN02654 666 PLN02654, PLN02654, acetate-CoA ligase 3e-20
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 3e-20
cd04433 338 cd04433, AFD_class_I, Adenylate forming domain, Cl 7e-19
TIGR02316 628 TIGR02316, propion_prpE, propionate--CoA ligase 1e-18
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 2e-18
PRK04319 570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 3e-16
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 2e-15
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 2e-14
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 4e-14
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 2e-13
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 2e-13
PRK10524 629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 2e-13
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 3e-12
COG1022 613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 4e-12
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 6e-11
cd12118 520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 2e-10
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-09
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 2e-08
PRK06710 563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 3e-08
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 4e-08
PRK06187 521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-07
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 1e-07
PRK06178 567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 3e-07
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 4e-07
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 5e-07
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 6e-07
PTZ00237 647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 6e-07
TIGR03098 517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 6e-07
cd12119 517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 7e-07
PLN02246 537 PLN02246, PLN02246, 4-coumarate--CoA ligase 8e-07
PRK07529 632 PRK07529, PRK07529, AMP-binding domain protein; Va 8e-07
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 1e-06
cd05918 447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 1e-06
PRK07059 557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 1e-06
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 3e-06
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 3e-06
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 4e-06
PRK08314 546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 4e-06
cd05928 530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 6e-06
PRK06087 547 PRK06087, PRK06087, short chain acyl-CoA synthetas 8e-06
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 1e-05
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 1e-05
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 2e-05
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 2e-05
cd05959 506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 2e-05
PRK12583 558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 3e-05
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 4e-05
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 4e-05
PRK07786 542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 5e-05
PLN02574 560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 7e-05
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 8e-05
PRK08276 502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 1e-04
PRK12582 624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 1e-04
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 1e-04
cd05930 445 cd05930, A_NRPS, The adenylation domain of nonribo 2e-04
cd05932 504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 3e-04
PRK07798 533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 3e-04
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 4e-04
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 4e-04
PRK06334 539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 4e-04
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 4e-04
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 5e-04
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 5e-04
cd05929 342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 6e-04
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 6e-04
PLN02330 546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 7e-04
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 7e-04
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 0.001
PRK08180 614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 0.001
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 0.002
cd05921 559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 0.002
PRK05605 573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 0.002
PRK04813 503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 0.002
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 0.002
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 0.002
PRK12406 509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 0.003
PLN03102 579 PLN03102, PLN03102, acyl-activating enzyme; Provis 0.003
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 0.004
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 0.004
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 0.004
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information 
 Score = 1010 bits (2614), Expect = 0.0
 Identities = 361/611 (59%), Positives = 441/611 (72%), Gaps = 8/611 (1%)

Query: 1   MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
            GK++ E+ V DL   GL  EEAE+F K L+ +++ + G     IWR  +++ +L P HP
Sbjct: 4   AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRA-GASPPSIWRR-ISQSLLTPSHP 61

Query: 61  HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
             LHQL+YYS Y +WD+   GPP  WFPS + +KLTNLG  LE  G +LLG  YKDPI+S
Sbjct: 62  FALHQLMYYSCYKNWDSDTLGPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISS 121

Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
           F  FQ+F+VE+PE YW I L E+S+VF   P+CILD +D+S  GG WLPG+VLN+AECCL
Sbjct: 122 FSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDESNPGGQWLPGAVLNVAECCL 181

Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239
            P   +   D+++AI+WR++  D+  VN MT  ELR QV  VANALD + F KGDAIAID
Sbjct: 182 TPKPSKT--DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239

Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
           MPM V AVIIYLAIILAG VVVSIADSFA  EIATRL++SKAK IFTQD I+RGG+  PL
Sbjct: 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPL 299

Query: 300 YSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV 359
           YS+V+ A   KAIVLPA G  V + LRE D+SW DFL+  +   RP+ Y  V  PV+A  
Sbjct: 300 YSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFT 359

Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
           NILFSSGTTGEPKAIPWTQL+ +R  A+ WAH+D++ GD+ CWPTNLGW+MGP ++++S 
Sbjct: 360 NILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASL 419

Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
           LNGATLALY GSPL R F KFVQDA VT+LGTVPS+VK W+NTNC+ GLDW+ IR F ST
Sbjct: 420 LNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479

Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
           GE S+VDD LWL S+A Y  IIE CGGTEL   ++ GSLLQPQAF AFST  M   L IL
Sbjct: 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFIL 539

Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRH---HQA 596
           D+ G PYPDD PC GE+ LFPL  GAS  LLNADH +VYF+GMP++ G    RH    + 
Sbjct: 540 DDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFER 599

Query: 597 DCRGLYHCTGK 607
              G Y   G+
Sbjct: 600 TSGGYYRAHGR 610

Length = 728
>gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 608
PLN03052 728 acetate--CoA ligase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
COG0365 528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PTZ00237 647 acetyl-CoA synthetase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PLN02654 666 acetate-CoA ligase 100.0
TIGR02316 628 propion_prpE propionate--CoA ligase. This family c 100.0
TIGR02188 625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK10524 629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK03584 655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK00174 637 acetyl-CoA synthetase; Provisional 100.0
TIGR01217 652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
KOG1175 626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1176 537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177 596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0318 534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PLN02614 666 long-chain acyl-CoA synthetase 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PRK06334 539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PLN02736 651 long-chain acyl-CoA synthetase 100.0
PTZ00342 746 acyl-CoA synthetase; Provisional 100.0
PRK04319 570 acetyl-CoA synthetase; Provisional 100.0
PLN02861 660 long-chain-fatty-acid-CoA ligase 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
PRK07529 632 AMP-binding domain protein; Validated 100.0
COG1022 613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
COG1021 542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PLN02860 563 o-succinylbenzoate-CoA ligase 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PLN02387 696 long-chain-fatty-acid-CoA ligase family protein 100.0
PTZ00216 700 acyl-CoA synthetase; Provisional 100.0
PRK13295 547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
KOG1256 691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PLN03051 499 acyl-activating enzyme; Provisional 100.0
PLN02430 660 long-chain-fatty-acid-CoA ligase 100.0
PLN02246 537 4-coumarate--CoA ligase 100.0
PLN02574 560 4-coumarate--CoA ligase-like 100.0
PRK05677 562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09274 552 peptide synthase; Provisional 100.0
PRK07638 487 acyl-CoA synthetase; Validated 100.0
PRK08180 614 feruloyl-CoA synthase; Reviewed 100.0
PRK08314 546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK07769 631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12476 612 putative fatty-acid--CoA ligase; Provisional 100.0
PLN02330 546 4-coumarate--CoA ligase-like 1 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK06839 496 acyl-CoA synthetase; Validated 100.0
PRK06187 521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK05857 540 acyl-CoA synthetase; Validated 100.0
PRK08316 523 acyl-CoA synthetase; Validated 100.0
PRK08315 559 AMP-binding domain protein; Validated 100.0
PRK05605 573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12582 624 acyl-CoA synthetase; Provisional 100.0
PRK06145 497 acyl-CoA synthetase; Validated 100.0
PRK05851 525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK10946 536 entE enterobactin synthase subunit E; Provisional 100.0
PRK06087 547 short chain acyl-CoA synthetase; Reviewed 100.0
TIGR02262 508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK05852 534 acyl-CoA synthetase; Validated 100.0
PRK07008 539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK03640 483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK12583 558 acyl-CoA synthetase; Provisional 100.0
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK06155 542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK07470 528 acyl-CoA synthetase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09088 488 acyl-CoA synthetase; Validated 100.0
PRK07514 504 malonyl-CoA synthase; Validated 100.0
PRK07786 542 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR01734 502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK08279 600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK05620 576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PLN03102 579 acyl-activating enzyme; Provisional 100.0
PRK06018 542 putative acyl-CoA synthetase; Provisional 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK08751 560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK06164 540 acyl-CoA synthetase; Validated 100.0
PRK07798 533 acyl-CoA synthetase; Validated 100.0
PRK06188 524 acyl-CoA synthetase; Validated 100.0
PRK07868 994 acyl-CoA synthetase; Validated 100.0
PRK04813 503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK13388 540 acyl-CoA synthetase; Provisional 100.0
PRK06178 567 acyl-CoA synthetase; Validated 100.0
PRK08974 560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06710 563 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK12406 509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK13391 511 acyl-CoA synthetase; Provisional 100.0
PLN02479 567 acetate-CoA ligase 100.0
PRK07867 529 acyl-CoA synthetase; Validated 100.0
KOG1180 678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK08162 545 acyl-CoA synthetase; Validated 100.0
PRK08276 502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
KOG1179 649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PRK09192 579 acyl-CoA synthetase; Validated 100.0
PRK05850 578 acyl-CoA synthetase; Validated 100.0
PRK07445 452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK07768 545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09029 458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK08308 414 acyl-CoA synthetase; Validated 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
PRK07824 358 O-succinylbenzoic acid--CoA ligase; Provisional 99.94
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 99.92
TIGR02155 422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 99.91
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.84
TIGR03335 445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.83
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.8
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.54
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.26
PF1374591 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A. 99.08
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.08
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.54
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 92.59
PLN02620 612 indole-3-acetic acid-amido synthetase 90.38
PRK09188 365 serine/threonine protein kinase; Provisional 88.79
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-77  Score=670.50  Aligned_cols=604  Identities=60%  Similarity=1.054  Sum_probs=502.2

Q ss_pred             CCCccccccHHHHHhcCCCchhhHHHHHHHHHHhhhcCCCchhHHHHHHHHHHhcCCCCCCCchhhhhhhhhccccccCC
Q 007319            1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIK   80 (608)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~pf~~~l~~~l~~~r~~~~~~~plfq~~~~~~~~~~   80 (608)
                      ||||++++..+||.++++..++++.|.+.|+++..... .+-..++-.. ..+.|+|..+.+.|++-.+.+.-+|.....
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (728)
T PLN03052          4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAG-ASPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL   81 (728)
T ss_pred             ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhc-CCchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence            79999999999999999999999999999999996665 3567777777 888999999988888877778788866665


Q ss_pred             CCCccccCCcchhcccchHHHHHHhCCcccccccCCCccchHHHHHhhhhChHHHHHHHHhhccceeeccccccccCCCC
Q 007319           81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK  160 (608)
Q Consensus        81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~  160 (608)
                      .++..|.|+++.....++..+++..+.......|...+.+|+.|+++++++++.||..+++.+.+.|++++.++++....
T Consensus        82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~  161 (728)
T PLN03052         82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE  161 (728)
T ss_pred             CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence            56678999888888888888877754433333366666789999999999999999999999988999999999865323


Q ss_pred             CCCCCcccCCCchhHhhhcccccccCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEE
Q 007319          161 SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID  239 (608)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~  239 (608)
                      ..+..+||+++.+|++++|++++.  +++|+++|+++.+++.+++.++++||+||.++++++|++|+++ +++||+|+++
T Consensus       162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~  239 (728)
T PLN03052        162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID  239 (728)
T ss_pred             CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence            456679999999999999998865  5689999999987532334567999999999999999999999 9999999999


Q ss_pred             cCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCC
Q 007319          240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN  319 (608)
Q Consensus       240 ~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (608)
                      ++|++|+++++|||+++|++++|++|.++.+++.+++++++++++|+++.+.+.++.++....+.+.....++++.....
T Consensus       240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~  319 (728)
T PLN03052        240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK  319 (728)
T ss_pred             eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence            99999999999999999999999999999999999999999999999998877778888777776665555666654321


Q ss_pred             CCCCCCCCCCccHHHhhcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcE
Q 007319          320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV  399 (608)
Q Consensus       320 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~  399 (608)
                      ............|++++..................++++++|+|||||||+||||+++|++++..+......++++++|+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~  399 (728)
T PLN03052        320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI  399 (728)
T ss_pred             ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence            11111112345688776543210001112222335689999999999999999999999998777666666678999999


Q ss_pred             EEEeccccccchhHHhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEee
Q 007319          400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST  479 (608)
Q Consensus       400 ~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~g  479 (608)
                      ++++++++|+++.+.++.+|+.|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus       400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~  479 (728)
T PLN03052        400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST  479 (728)
T ss_pred             EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence            99999999999998888999999999999877777789999999999999999999999988754456789999999999


Q ss_pred             cCCCChhhhHHHHhhccCCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEEe
Q 007319          480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF  559 (608)
Q Consensus       480 Ge~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v~  559 (608)
                      ||+++++...|+...++..+++|.||+||++++++......+...+++|+|++|++++|+|++|+++|.|++++|||++.
T Consensus       480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~  559 (728)
T PLN03052        480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF  559 (728)
T ss_pred             CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence            99999998888877665567999999999987554444334456688999999999999999999999986446999998


Q ss_pred             cccCCCcccccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319          560 PLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG  608 (608)
Q Consensus       560 ~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~  608 (608)
                      +.++++..+|++++.+..||..+|..++++||+||   ++|+||+++|+||+
T Consensus       560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~  611 (728)
T PLN03052        560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRA  611 (728)
T ss_pred             CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecC
Confidence            87777777888888888999888888888999999   99999999999995

>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query608
2p2b_A 652 Acetyl-coa Synthetase, V386a Mutation Length = 652 5e-27
2p2q_A 652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 5e-27
2p20_A 652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 5e-27
2p2f_A 652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 6e-27
2p2j_A 652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 6e-27
2p2m_A 652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 4e-26
1pg3_A 652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 8e-26
1ry2_A 663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 4e-15
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 1e-07
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 1e-07
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 3e-04
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure 
Iteration: 1

 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 148/333 (44%), Gaps = 25/333 (7%)
Query: 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL 226
           W     LN+A  CL    H ++  +  AI+W  D  D S    ++Y+EL   V   AN L
Sbjct: 69  WYEDGTLNLAANCL--DRHLQENGDRTAIIWEGD--DTSQSKHISYRELHRDVCRFANTL 124
Query: 227 -DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
            D    KGD +AI MPM   A +  LA    G V   I   F+   +A R+  S ++ + 
Sbjct: 125 LDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVI 184
Query: 286 TQDFILRGGRKFPLYSKVLGA-------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338
           T D  +R GR  PL   V  A       +    IVL   G+D+      +DL W+D +  
Sbjct: 185 TADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEK 243
Query: 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVG 397
                 P +     N  D +  IL++SG+TG+PK +  T    +   A  + ++ D   G
Sbjct: 244 AS----PEHQPEAMNAEDPLF-ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPG 298
Query: 398 DVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVP 453
           D+Y    ++GWV G   +L+     GAT  +++G    P      + V    V +L T P
Sbjct: 299 DIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAP 358
Query: 454 SLVKAW--RNTNCLEGLDWTKIRSFASTGETSN 484
           + ++A        +EG D + +R   S GE  N
Sbjct: 359 TAIRALMAEGDKAIEGTDRSSLRILGSAGEPIN 391
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query608
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 4e-36
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 8e-33
3etc_A 580 AMP-binding protein; adenylate-forming acyl-COA sy 2e-32
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 1e-29
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 2e-29
2d1s_A 548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 6e-26
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 8e-26
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 6e-24
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 2e-23
1mdb_A 539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 3e-23
3o83_A 544 Peptide arylation enzyme; ligase, adenylation of 2 3e-22
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 5e-22
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 2e-21
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 3e-18
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 5e-18
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-17
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 6e-17
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 4e-14
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 8e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 1e-07
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 3e-07
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 5e-07
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-06
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
 Score =  141 bits (357), Expect = 4e-36
 Identities = 80/399 (20%), Positives = 135/399 (33%), Gaps = 44/399 (11%)

Query: 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL 226
             P ++ N A    L   +  +   T A +              TY EL E+    A+AL
Sbjct: 17  EAPPALFNFAA--YLFRLNETRAGKT-AYIDDTGS--------TTYGELEERARRFASAL 65

Query: 227 DTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
            T+     + I + M  TV   + +L  + AG V V         +    L  S A+ + 
Sbjct: 66  RTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVI 125

Query: 286 TQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345
               ++         ++ L +A      L         P       +++ + +       
Sbjct: 126 ASGALV------QNVTQALESAEHDGCQLIVSQPRESEP--RLAPLFEELIDA-----AA 172

Query: 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWP 403
                     D +   L+SSG+TG+PK    T  +++  TAE +A   + +   DV    
Sbjct: 173 PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTH-ANLYWTAELYAKPILGIAENDVVFSA 231

Query: 404 TNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 462
             L +  G    L      GAT  L    P   +    + +   TV   VP+L      +
Sbjct: 232 AKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVS 291

Query: 463 NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA----IIESCGGTELSSAYIQGSL 518
             L       IR   S GE      ++    + +       I++  G TE+   ++  + 
Sbjct: 292 PNLPARADVAIRICTSAGEALPR--EIG---ERFTAHFGCEILDGIGSTEMLHIFL-SNR 345

Query: 519 LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557
                +G          + + DE G   PD     GEVG
Sbjct: 346 AGAVEYGTTGRPVPGYEIELRDEAGHAVPD-----GEVG 379
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query608
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3etc_A 580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
4gr5_A 570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
1amu_A 563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
4fuq_A 503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3o83_A 544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1mdb_A 539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3e7w_A 511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3r44_A 517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3fce_A 512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
2d1s_A 548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
2v7b_A 529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3l8c_A 521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1t5h_X 504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3ite_A 562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3nyq_A 505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3ipl_A 501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
4gs5_A 358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y4o_A 443 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.98
3qov_A 436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 99.97
2y27_A 437 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.97
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.97
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 98.58
1l5a_A436 Amide synthase, VIBH; nonribosomal peptide synthet 98.06
4hvm_A493 Tlmii; PSI-biology, midwest center for structural 98.05
2xhg_A466 Tyrocidine synthetase A; isomerase, nonribosomal p 96.78
4eql_A 581 4-substituted benzoates-glutamate ligase GH3.12; f 95.7
4b2g_A 609 GH3-1 auxin conjugating enzyme; signaling protein, 94.84
4epl_A 581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 94.43
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 89.7
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 84.06
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 83.07
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 82.25
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
Probab=100.00  E-value=2e-71  Score=662.40  Aligned_cols=532  Identities=15%  Similarity=0.108  Sum_probs=414.4

Q ss_pred             HhcCCCchhhHHHHHHHHHHhhhcCCC-chhHHHHHHHHHHhcCCCCCCCchhhhhhhhhccccccCCCC---------C
Q 007319           14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP---------P   83 (608)
Q Consensus        14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~~plfq~~~~~~~~~~~~---------~   83 (608)
                      +|+|++++++.+|.++|++++++..++ +||++||++ |++.++  +    +  |+||+||++++.+...         .
T Consensus       302 lplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~~~l~--~----~--~lf~~~~~~~~~~~~~~~~~~~~~~g  372 (1304)
T 2vsq_A          302 VPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQSQAD--Q----P--KLIDHIIVFENYPLQDAKNEESSENG  372 (1304)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HHHSSS--C----S--SSCCCEEEECSSCHHHHSCCCHHHHS
T ss_pred             EEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HHHHhC--C----C--cccceeEEEeecccccccccccccCC
Confidence            578999999999999999999998877 999999999 999874  2    2  5699999998754211         0


Q ss_pred             ccccC-CcchhcccchHHHHHHhCCcccccc-cCCCccchHHHHHhhhhChHHHHHHHHhhccceeecccccc--ccCCC
Q 007319           84 LYWFP-SLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTD  159 (608)
Q Consensus        84 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~  159 (608)
                      +...+ ......+|||.+.+. .++++...+ |+.     ++|...+++++.++|.++++++...++.+...+  +...+
T Consensus       373 ~~~~~~~~~~~~~~dL~l~~~-~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~~~~l~~~e  446 (1304)
T 2vsq_A          373 FDMVDVHVFEKSNYDLNLMAS-PGDEMLIKLAYNE-----NVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVDDRE  446 (1304)
T ss_dssp             EEEEEEEECCCCCSSEEEEEE-CSSSCEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHSTTSBGGGCCCCCHHH
T ss_pred             ceeEeeecccccccCeEEEEe-cCCcEEEEEEECC-----ccCCHHHHHHHHHHHHHHHHHhccCccccccccCCCCHHH
Confidence            00000 011356788887653 355677777 877     999999999999999999999876555554432  22211


Q ss_pred             CCCCCCcccCCCchhHhhhcccc--cccCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEE
Q 007319          160 KSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAI  236 (608)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V  236 (608)
                      .......|+....... ..++..  ..+++++||++|+++.+.        ++||+||+++++++|++|++. +++|++|
T Consensus       447 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V  517 (1304)
T 2vsq_A          447 REFLLTGLNPPAQAHE-TKPLTYWFKEAVNANPDAPALTYSGQ--------TLSYRELDEEANRIARRLQKHGAGKGSVV  517 (1304)
T ss_dssp             HHHHHTTTSCCCCCCC-CCCHHHHHHHHHHHCTTSEEEESSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEE
T ss_pred             HHHHHHhcCCCCCCCC-CCCHHHHHHHHHHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHhcCcCCcCEE
Confidence            1111233443322111 111211  225588999999998777        999999999999999999999 9999999


Q ss_pred             EEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC-cEEEEe
Q 007319          237 AIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLP  315 (608)
Q Consensus       237 ai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  315 (608)
                      +|+++|++++++++|||+|+|+++|||||.+|.+++.+++++++++++|++.......          ...+. ...++.
T Consensus       518 ~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~----------~~~~~~~~~~~~  587 (1304)
T 2vsq_A          518 ALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQA----------AELPYTGTTLFI  587 (1304)
T ss_dssp             EECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTS----------TTCCCCSEEEES
T ss_pred             EEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhh----------hccCCCCcEEEe
Confidence            9999999999999999999999999999999999999999999999999987532110          01111 111111


Q ss_pred             cCCCCCCCCCCCCCccHHHhhcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCC
Q 007319          316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK  395 (608)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~  395 (608)
                      . .             ........       ........++++|||+|||||||+||||+++|+++.+. .+....++++
T Consensus       588 ~-~-------------~~~~~~~~-------~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~  645 (1304)
T 2vsq_A          588 D-D-------------QTRFEEQA-------SDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFS  645 (1304)
T ss_dssp             S-C-------------GGGGGSCS-------SCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCC
T ss_pred             c-c-------------cccccccc-------CCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCC
Confidence            0 0             00011100       11123456799999999999999999999999999876 5555678899


Q ss_pred             CCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC--CCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccc
Q 007319          396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI  473 (608)
Q Consensus       396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~--~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~L  473 (608)
                      ++|++++.+|++|+.+.++++.+|+.|+++++.+.  ..++..+.+.|++++||++.++|++++.|.+..   ...+++|
T Consensus       646 ~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~l  722 (1304)
T 2vsq_A          646 DQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMKGL  722 (1304)
T ss_dssp             TTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHHTC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCCCc
Confidence            99999999999999999999999999999999874  357889999999999999999999999998653   2236789


Q ss_pred             cEEEeecCCCChhhhHHHHhhccCCceeccccccccccccccCCCC---CCCccCccCcCCCCcEEEEECCCCCcCCCCC
Q 007319          474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGVPYPDDQ  550 (608)
Q Consensus       474 r~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~  550 (608)
                      |.+++|||++++++.+++.+.+++.+++|.||+||+++.++.....   ......++|+|++|++++|+|++++++|.|+
T Consensus       723 r~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~  802 (1304)
T 2vsq_A          723 RCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPFGA  802 (1304)
T ss_dssp             SEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCTTC
T ss_pred             cEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCCCC
Confidence            9999999999999988888777767899999999998755443221   2234578999999999999999999999999


Q ss_pred             CceeeEEE-ecccCCCcccccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319          551 PCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG  608 (608)
Q Consensus       551 ~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~  608 (608)
                      +  |||+| |++...|  |+.++++|+++|..+|+.+|++|||||   ++++||+|+|+||+
T Consensus       803 ~--GEl~i~G~~v~~G--Y~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~  860 (1304)
T 2vsq_A          803 V--GELCISGMGVSKG--YVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRI  860 (1304)
T ss_dssp             C--EEEEEEETTCCCC--BTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEG
T ss_pred             c--eEEEEeccccCcc--ccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCC
Confidence            5  99999 6655543  233778999999999988899999999   99999999999995
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 608
d1pg4a_ 643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 4e-54
d1ry2a_ 640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 4e-45
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 3e-26
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-22
d1amua_ 514 e.23.1.1 (A:) Phenylalanine activating domain of g 3e-21
d1mdba_ 536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 1e-16
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 4e-13
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  193 bits (491), Expect = 4e-54
 Identities = 107/464 (23%), Positives = 186/464 (40%), Gaps = 30/464 (6%)

Query: 126 KFTVEHPEAYWEIALKEISVVFREAPKCILDRT-DKSKHGGTWLPGSVLNIAECCLLPSN 184
           K ++  P+ +W    K +   +    + + + +         W     LN+A  CL    
Sbjct: 25  KQSINDPDTFWGEQGKILD--WITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCL--DR 80

Query: 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243
           H ++  +  AI+W  D   +S    ++Y+EL   V   AN L  +   KGD +AI MPM 
Sbjct: 81  HLQENGDRTAIIWEGDDTSQSKH--ISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMV 138

Query: 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
             A +  LA    G V   I   F+   +A  +  S ++ + T D  +R GR  PL   V
Sbjct: 139 PEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNV 198

Query: 304 LGAAPLKAIVLPAIGNDVGIPLREQDLSW---KDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
             A  LK   + ++ + + +     D+ W   +D             + P     +  + 
Sbjct: 199 DDA--LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLF 256

Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPV-ILFSS 418
           IL++SG+TG+PK +  T    +   A  + ++ D   GD+Y    ++GWV G   +L+  
Sbjct: 257 ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGP 316

Query: 419 FLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAWRNTN--CLEGLDWTKI 473
              GAT  +++G P   +     + V    V +L T P+ ++A        +EG D + +
Sbjct: 317 LACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSL 376

Query: 474 RSFASTGETSNVDDDLWLSSK--AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT 531
           R   S GE  N +   W   K       ++++   TE +  ++   L       A S   
Sbjct: 377 RILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTE-TGGFMITPLPGAIELKAGSATR 435

Query: 532 MTAG--LVILDECGVPYPDDQP---CVGE--VGLFPLYLGASDR 568
              G    ++D  G P          + +   G      G  +R
Sbjct: 436 PFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHER 479
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query608
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_ 640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_ 536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1l5aa2250 VibH {Vibrio cholerae [TaxId: 666]} 98.08
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 86.94
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 86.63
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 80.04
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=1.5e-66  Score=574.98  Aligned_cols=473  Identities=25%  Similarity=0.364  Sum_probs=376.7

Q ss_pred             CccchHHHHHhhhhChHHHHHHHHhhccceeeccccccccCCCC-CCCCCcccCCCchhHhhhcccccccCCCCCCcEEE
Q 007319          117 PITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK-SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAI  195 (608)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Av  195 (608)
                      .+++|+.++++++++++.||..+.+.  +.|.+++.++++.... .....+||.++.+|++++++++++  +.+||++|+
T Consensus        16 ~~~~y~~l~~~s~~~~~~fW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~N~~~n~ldrh~--~~~~d~~Al   91 (643)
T d1pg4a_          16 NPEQYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHL--QENGDRTAI   91 (643)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHGGG--SCCSBCCSCCEEEECCTTCCEEEESTTCEECHHHHHTGGGH--HHHTTSEEE
T ss_pred             CHHHHHHHHHHHHhCHHHHHHHHHhh--eeEECCCcccccCccCCCCCCCeeCCCChhhHHHHHHHHHH--HhCCCCEEE
Confidence            45689999999999999999999986  5788888888765422 233568999999999999999986  678999999


Q ss_pred             EEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHH
Q 007319          196 VWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIAT  274 (608)
Q Consensus       196 ~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~  274 (608)
                      ++.+.  +.+..+++||+||.++++++|++|+++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+
T Consensus        92 i~~~~--~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~  169 (643)
T d1pg4a_          92 IWEGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAG  169 (643)
T ss_dssp             EEECS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHH
T ss_pred             EEEec--CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHHH
Confidence            98754  346678999999999999999999999 999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCceEEEeecceeecCcccCchHhHhhhC-----C--CcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCCCCC
Q 007319          275 RLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-----P--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY  347 (608)
Q Consensus       275 ~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  347 (608)
                      ++++++++++|+++...+..+..+....+...+     .  ..++++...+..... .......+.+.......     .
T Consensus       170 ~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~  243 (643)
T d1pg4a_         170 CIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEKASP-----E  243 (643)
T ss_dssp             HHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC-CBTTEEEHHHHHTTSCS-----C
T ss_pred             HHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc-ccccchhhhhhhcccCc-----c
Confidence            999999999999998877776666555544322     1  123333333221111 11122333444333222     2


Q ss_pred             CCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHH-HHHhhhhcCCCCCcEEEEeccccccchhH-HhHHHHHhCCeE
Q 007319          348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC-TAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATL  425 (608)
Q Consensus       348 ~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~G~~~  425 (608)
                      ..+...+++|+++|+|||||||+||||+++|++++.. .......++++++|++++.+|++|++++. .++.+|+.|+++
T Consensus       244 ~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~  323 (643)
T d1pg4a_         244 HQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATT  323 (643)
T ss_dssp             CCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEE
T ss_pred             cCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEE
Confidence            3344567899999999999999999999999996544 44445567899999999999999999974 578899999999


Q ss_pred             EEeCCC---CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCc--CCCCCCccccEEEeecCCCChhhhHHHHhhcc--CC
Q 007319          426 ALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YN  498 (608)
Q Consensus       426 vl~~~~---~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~--~~  498 (608)
                      +++++.   +++..++++|++++||++.++|++++.|++...  ....++++||.+++||+++++++++++.+.++  ++
T Consensus       324 vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~  403 (643)
T d1pg4a_         324 LMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKC  403 (643)
T ss_dssp             EEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCS
T ss_pred             EEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCc
Confidence            998743   477899999999999999999999999987643  34567999999999999999999999988875  46


Q ss_pred             ceeccccccccccccccCCC-CCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEEecccCCCcccccC-chhhc
Q 007319          499 AIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLN-ADHEE  576 (608)
Q Consensus       499 ~i~~~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v~~~~~~~~~~~~~-~~~t~  576 (608)
                      +++|.||+||+++.++.... ..+.+.+++|+|++|++++|+|++|++++.|+  +|||+|...+.+...+|++ ++.+.
T Consensus       404 ~i~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~--~Gel~v~~~~p~~~~~~~~~~~~~~  481 (643)
T d1pg4a_         404 PVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQARTLFGDHERFE  481 (643)
T ss_dssp             CEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCCEETTCHHHHH
T ss_pred             eEEEeechhhccceEEecCCCccCCCCCccccccCCCEEEEECCCCCCCCCCc--eEEEEEecCCCcccccccCChhhch
Confidence            79999999999875554333 23456789999999999999999999999998  4999994322333334444 34444


Q ss_pred             c-ccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319          577 V-YFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG  608 (608)
Q Consensus       577 ~-~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~  608 (608)
                      + +|..     .+.||+||   ++|+||+|+|+||+
T Consensus       482 ~~~~~~-----~~g~~~TGDl~~~d~dG~l~i~GR~  512 (643)
T d1pg4a_         482 QTYFST-----FKNMYFSGDGARRDEDGYYWITGRV  512 (643)
T ss_dssp             HHHHSS-----STTSEEEEEEEEECTTSCEEEEEES
T ss_pred             hhhccc-----CCCeEEcCCEEEECCCceEEEeccc
Confidence            3 3332     23389999   99999999999995
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure