Citrus Sinensis ID: 007360

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600------
MDLIASCKEKLAHFRIKELKDVLTQLGLSKQGKKQDLVDRILAILSDDQVSKMWAKKSPVSKEEVAKLVDDTHRKLQVSVAPDLASKGGQGVSNSSNIKIKGEMDDYIQSDTKVCCPCGSSLETESMIKCEDPRCPVWQHMSCVIIPEKPTEGNPPVPELFYCEICRLSRADPFWVTIGHPLYPLKLTTTNIPTDGTNPARILEKTFPITRADKDLLSKQEYDVQAWCMLLNDKVPFRMQWPQYADLQVNGVPVRAINRPGSQLLGANGRDDGPIITPWTKDGINKIVLTGCDARIFCLGVRIVKRRSVQQVLNLIPKESEGEHFEDALTRVCRCVGGGNAADNADSDSDLEVVADSIGVNLRCPMSGSRIKVAGRFKPCVHMGCFDLDVFVELNQRSRKWQCPICLRNYSLENIIIDPYFNRITSKMRNCGEDITELEVKPDGSWRVKTRSESDRREIGDLASWHFPDGSLCAPAGGEDKPKVEMLKHVRQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNNGIEHDSMSLNVDPTYAFADRNPCAPVGNRSYCS
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccEEEEEEEEEccccccccccccccccEEcccEEECcccccccccccccccccccccccccccccEEEEEEEcccEEEEEEEEEEEccHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccEEEEEccccccccccccEEccccccccccccccccHHHHHHHHcccccccccccccccccccEEEcHHHHHHHHHHcccccccEEEEEcccccCECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
*****SCKEKLAHFRIKELKDVLTQLGLSKQGKKQDLVDRILAILSDDQVS**************************************************************************SMIKCEDPRCPVWQHMSCVIIPEKPT*GNPPVPELFYCEICRLSRADPFWVTIGHPLYPLKLTTTNIPTDGTNPARILEKTFPITRADKDLLSKQEYDVQAWCMLLNDKVPFRMQWPQYADLQVNGVPVRAINRPGSQL**ANGRDDGPIITPWTKDGINKIVLTGCDARIFCLGVRIVKRRSVQQVLNLIPKESEGEHFEDALTRVCRCVGGGNAA****SDSDLEVVADSIGVNLRCPMSGSRIKVAGRFKPCVHMGCFDLDVFVELNQRSRKWQCPICLRNYSLENIIIDPYFNRITSKMRNCGEDITELEVKPDGS****************LASWHFPDGSLC************************GHIGLKLGIRKNRNGLW*****************************************************FDFT***********NVDPTYAFA***************
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MDLIASCKEKLAHFRIKELKDVLTQLGLSKQGKKQDLVDRILAILSDDQVSKMWAKKSPVSKEEVAKLVDDTHRKLQVSVAPDLASKGGQGVSNSSNIKIKGEMDDYIQSDTKVCCPCGSSLETESMIKCEDPRCPVWQHMSCVIIPEKPTEGNPPVPELFYCEICRLSRADPFWVTIGHPLYPLKLTTTNIPTDGTNPARILEKTFPITRADKDLLSKQEYDVQAWCMLLNDKVPFRMQWPQYADLQVNGVPVRAINRPGSQLLGANGRDDGPIITPWTKDGINKIVLTGCDARIFCLGVRIVKRRSVQQVLNLIPKESEGEHFEDALTRVCRCVGGGNAADNADSDSDLEVVADSIGVNLRCPMSGSRIKVAGRFKPCVHMGCFDLDVFVELNQRSRKWQCPICLRNYSLENIIIDPYFNRITSKMRNCGEDITELEVKPDGSWRVKTRSESDRREIGDLASWHFPDGSLCAPAGGEDKPKVEMLKHVRQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNNGIEHDSMSLNVDPTYAFADRNPCAPVGNRSYCS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
E3 SUMO-protein ligase SIZ1 E3 SUMO protein ligase involved in regulation processes. Mediates SUMO/ attachment to PHR1, a MYB transcriptional activator controlling the phosphate deficiency responses. Functions as an upstream negative regulator of salicylic acid (SA) accumulation and subsequent SA-mediated systemic acquired resistance (SAR) signaling. Probably not involved in jasmonic acid (JA)-mediated defense response. Participates in abiotic stress-induced sumoylation. Controls heat shock-induced SUMO1 and SUMO2 conjugation and facilitates basal thermotolerance. Involved in freezing tolerance by mediating sumoylation of ICE1, a transcription activator of the cold signaling regulator CBF3/DREB1A. Acts as positive regulator of drought stress tolerance. Acts as floral repressor that promotes FLC expression by repressing FLD activity through sumoylation. Acts as negative regulator of abscisic acid (ABA) signaling through ABI5 sumoylation. Mediates sumoylation of SCE1, GTE3 and GTE5.probableQ680Q4
E3 SUMO-protein ligase SIZ1 Probable SUMO E3 ligase that may regulate Pi starvation responses.probableQ6L4L4

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2RNO, chain A
Confidence level:very confident
Coverage over the Query: 2-104
View the alignment between query and template
View the model in PyMOL
Template: 4FO9, chain A
Confidence level:very confident
Coverage over the Query: 166-337,356-448
View the alignment between query and template
View the model in PyMOL
Template: 1WEW, chain A
Confidence level:very confident
Coverage over the Query: 103-173
View the alignment between query and template
View the model in PyMOL